Citrus Sinensis ID: 013608

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
Protein Sequence
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEcccccccccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEccEEEEEEccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHccccEEEEEccHHHHHHHHHHHHcccccEEEEccccccEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEcccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccccccccEEccEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccEEEEccEcEEEccccEEEEEccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHcHHHHccccEEEcccccccccEEEEcccccEEEcEEccccHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHcccEEEEEccHHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHHHHHHHHcHHHHcccccccEEEEEHHHHHHHHHHHHHHHHcccEcccccccccEcccccHHHHHHHHHHHHHHHHHccEEEEcccccccccccccEEEccEEEcccccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MAFLFSLIVLAFAYAICRFLLmlippnvpsidvdasdvlddgnqtpdnsfiyipprgrtpqsetkvqcyepatmkylgyfpalsraEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEIssrdtgktmVDASLGEIMTTCEKITWLLSEgekwlkpeyrssgrsmihkkakvefhplGVVGAIVswnypfhnifnpmlAAVFSGNGIVIKVSenaswsgcFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIfvgspgvgrMIMRnasktltpvtlelggkdafivcddvdvpHVAQIAVRAALQSsgqncagaerfYVHRDIYALFVSQVAKIVKSvsagpplagkydmgaLCLLEHSEKLQNLVNDALDKGAEILargsfghlsegavdqyfpptvIVNVNHTMKLMQEEIILWVS
Flexible Loop (DISEMBL)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGnqtpdnsfiyipprgrtpqsetKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQkvwakssfkqrRQFLRILLKYIIEHQELIceissrdtgKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Low Complexity Region (SEG)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Disordered region (IsUnstruct)
**FLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDV***********FIYI***********KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV*
Disordered Region (DISOPRED)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSID************TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Disordered Region (DISEMBL)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEV*****************SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Disordered Region (DISPRO)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	439	2.2.26 [Sep-21-2011]
Q0WSF1	596	Aldehyde dehydrogenase 22	yes	no	0.986	0.726	0.840	0.0
P38694	644	Putative aldehyde dehydro	yes	no	0.847	0.577	0.392	2e-74
Q9P7K9	522	Putative aldehyde dehydro	yes	no	0.842	0.708	0.362	3e-71
P94428	462	Succinate-semialdehyde de	yes	no	0.808	0.768	0.289	1e-40
Q9I6C8	476	Probable coniferyl aldehy	yes	no	0.765	0.705	0.319	4e-40
P17202	497	Betaine aldehyde dehydrog	N/A	no	0.856	0.756	0.294	3e-39
Q0B712	489	Betaine aldehyde dehydrog	no	no	0.806	0.723	0.312	3e-39
B1Z033	489	Betaine aldehyde dehydrog	yes	no	0.806	0.723	0.312	3e-39
A4XPI6	490	Betaine aldehyde dehydrog	no	no	0.792	0.710	0.319	3e-38
Q9S795	501	Betaine aldehyde dehydrog	no	no	0.851	0.746	0.306	5e-38

>sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 396/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|P38694|MSC7_YEAST Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC7 PE=1 SV=1

 Score =  280 bits (716), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 155/395 (39%), Positives = 229/395 (57%), Gaps = 23/395 (5%)

Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
            P+    +QC+ PAT +YLG FP+ + A++DE V++A KAQ  W  S F +R + L  L 
Sbjct: 105 NPEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLH 164

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
            YI+ +Q+LI  ++ RD+GKTM+DAS+GEI+ T EKI W +  G++ L+P  R    +  
Sbjct: 165 DYILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFF 224

Query: 179 ---HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
              +K A++ + PLGV+ +IVSWNYPFHN+  P++AA+F+GN IV+K SE   WS  F+ 
Sbjct: 225 MKWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFV 284

Query: 236 RIIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
            +I+  L A     +LV +      T   ++     S      I F+GS  V   I++ A
Sbjct: 285 ELIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCA 344

Query: 289 SKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
           +K+LTPV +ELGGKDAFIV D   ++  ++ I +R   QSSGQNC G ER  V ++ Y  
Sbjct: 345 AKSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY-- 402

Query: 348 FVSQVAKIVKS-VSAGPPLAG-------KYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
               + KI+   ++A P   G         DMGA+      ++L+ LV DA+ KGA +L 
Sbjct: 403 --DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQ 460

Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            GS     +     YF PT++V+V   MK+ Q E+
Sbjct: 461 GGSRFKHPKYPQGHYFQPTLLVDVTPEMKIAQNEV 495

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9P7K9|YOSF_SCHPO Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.15c PE=3 SV=1

 Score =  269 bits (688), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 216/372 (58%), Gaps = 2/372 (0%)

Query: 64  TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
           + + CY P     LG     +++++D+ +  A +AQK W  +SF +RR FL+ L + II 
Sbjct: 3   STLTCYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIR 62

Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
           +Q+   EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P  R +     +K   
Sbjct: 63  NQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGY 122

Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
           V++ PLGV+ A+VSWNYP HN   P+++A+F+GN IV+K SE  +WS   Y  ++++ L 
Sbjct: 123 VKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQ 182

Query: 244 AVGAPENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
           ++G    LV  IT   +  + L   S +  I F+GS  + +++  +A+K LTP+ LELGG
Sbjct: 183 SMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGG 242

Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
           KD  I+ DD  +  +  I +R   QS+GQNC G ER      +Y   ++++   + ++  
Sbjct: 243 KDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRL 302

Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
           G       DMGA+      + L++L+ DA+ KGA ++  G      +     YF PT++V
Sbjct: 303 GMYTQNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLV 362

Query: 422 NVNHTMKLMQEE 433
           +  + MK+ QEE
Sbjct: 363 DATNEMKIAQEE 374

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|P94428|GABD_BACSU Succinate-semialdehyde dehydrogenase [NADP(+)] OS=Bacillus subtilis (strain 168) GN=gabD PE=1 SV=1

 Score =  167 bits (424), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 196/377 (51%), Gaps = 22/377 (5%)

Query: 65  KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
           ++  Y PAT + +   P  S  EV+E + ++ +A K W+K+S  +R   L+   + I+EH
Sbjct: 4   QLTVYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEH 63

Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHK 180
           +E + ++ +++ GK   +A +GE++     I W   E +       R  GR++      K
Sbjct: 64  KEELADLITKENGKPYQEA-VGEVLYGAGYIEWFAEEAK-------RVYGRTVPAPTTGK 115

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           +  V   P+G V AI  WN+P   I      A+ +G   +IK + +   S     R+   
Sbjct: 116 RIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYE 175

Query: 241 ALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
           A    G P++++ V+ G  E  G    SS  + KI F GS  VG+++M+N++ T+  V++
Sbjct: 176 A----GIPKDVLQVVIGDGEEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHVSM 231

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGG    IV +D D+    + A+ +  +++GQ C  A R  VH  I   F +++++ V 
Sbjct: 232 ELGGHAPLIVDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVS 291

Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 416
            +  G  L    ++G +      EK+ + ++DA++KGA+++A G++    +     YF  
Sbjct: 292 KLKVGNGLEEGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGC--YFVN 349

Query: 417 PTVIVNVNHTMKLMQEE 433
           PTV+ +V+ +M +M EE
Sbjct: 350 PTVLTDVDTSMNIMHEE 366

Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|Q9I6C8|CALB_PSEAE Probable coniferyl aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=calB PE=3 SV=1

 Score =  166 bits (420), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 15/351 (4%)

Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL- 145
           +++   A+ R A          QR Q+L+ L   + + Q+ + E   RD      D +L 
Sbjct: 17  QLEALFARQRAAYLAQPMPDATQRVQWLKALRDLLFKEQQALIEAIDRDFSARSADETLL 76

Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
            EIM +   I +     +KW+KP  R+ G       A+V + PLGVVG IV WNYP    
Sbjct: 77  AEIMPSLHGIHYAAKRVKKWMKPARRAVGLQFQPASAQVVYQPLGVVGVIVPWNYPLFLS 136

Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
             P+  A+ +GN ++IK+SE+   +G    R+++  LA +  PE+ V V+ G  + G A 
Sbjct: 137 IGPLTGALAAGNRVMIKMSESTPATG----RLLKDLLARI-FPEDQVAVVLGEVDVGVAF 191

Query: 266 VS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
                D ++F G+  VG+ +MR A++ LTPVTLELGGK   IV D V +   A+      
Sbjct: 192 SKLPFDHLLFTGATSVGKHVMRAAAENLTPVTLELGGKSPAIVSDSVPMKDAAERIAFGK 251

Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
             ++GQ C   +   V       FVSQ  ++V+     P L+   D  A+       +L+
Sbjct: 252 SLNAGQTCVAPDYVLVPSRRVEEFVSQYKEVVQGFF--PRLSDNPDYTAIINERQLGRLR 309

Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
             ++DA +KGA ++   + G        +  P T+++NV+  MK+MQEEI 
Sbjct: 310 GYLDDAREKGATLVPLFAEGQ------QRRLPQTLLLNVSDDMKVMQEEIF 354

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 6

EC: 8

>sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1

 Score =  163 bits (412), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
           ++I    R P  + ++    P+T + +G  PA +  +V+  V  AR+A  +  W+ +S  
Sbjct: 10  LFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGA 69

Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
            R  +LR +   I E ++   ++ + D+GK   +A L +I        +   + E     
Sbjct: 70  HRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGK 128

Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
           +       M   K+ V   PLGVVG I  WNYP       +  A+ +G   V+K SE AS
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188

Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285
            + C  F  +      VG P  +++++TG   + G  LVS   VDKI F GS   G  +M
Sbjct: 189 VT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244

Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
            +A++ + PVTLELGGK   +V +DVD+  V +  +     ++GQ C+   R  VH  I 
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304

Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-G 404
           A FV ++ K  K++    P      +G +      +K+   ++ A  +GA IL  GS   
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364

Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           HL +G    Y  PT++ +++ +M++ +EE+
Sbjct: 365 HLKKG---YYIEPTIVTDISTSMQIWKEEV 391

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q0B712|BETB_BURCM Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1

 Score =  163 bits (412), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 179/375 (47%), Gaps = 21/375 (5%)

Query: 68  CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
            ++PAT + L      S A+VD  VA AR+ Q+ WA  +  QR + LR  +  + E  + 
Sbjct: 26  TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
           +  I +RDTGK + +    +I+T  + I +   L+   + L+   R+   S ++ + +  
Sbjct: 86  LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141

Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
             PLGV   I +WNYP          A+ +GN +V K SE    +      I   A    
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195

Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
           G P  + +V+ G    G  L    D  K+ F G    G+ +M  A + +L  VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
              IV +D D+   A IAV A   SSGQ C    R +VHR +   F  +V + VK +  G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
            P     + G L      +K+   ++    +GA++LA G+    GH + G   QY  PTV
Sbjct: 316 KPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFASG---QYVAPTV 372

Query: 420 IVNVNHTMKLMQEEI 434
             +    MK+++EEI
Sbjct: 373 FGDCRDDMKIVREEI 387

Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (taxid: 339670)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|B1Z033|BETB_BURA4 Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1

 Score =  162 bits (411), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 178/375 (47%), Gaps = 21/375 (5%)

Query: 68  CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
            ++PAT + L      S A+VD  VA AR+ Q+ WA  +  QR + LR  +  + E  + 
Sbjct: 26  TFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDE 85

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVE 185
           +  I +RDTGK + +    +I+T  + I +   L+   + L+   R+   S ++ + +  
Sbjct: 86  LAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAE--SFVYTRRE-- 141

Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
             PLGV   I +WNYP          A+ +GN +V K SE    +      I   A    
Sbjct: 142 --PLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEA---- 195

Query: 246 GAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 302
           G P  + +V+ G    G  L    D  K+ F G    G+ +M  A + +L  VT+ELGGK
Sbjct: 196 GVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGK 255

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
              IV +D D+   A IAV A   SSGQ C    R +VHR +   F  +V + VK +  G
Sbjct: 256 SPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF---GHLSEGAVDQYFPPTV 419
            P     + G L      +K+   ++    +GA++LA G+    GH   G   QY  PTV
Sbjct: 316 KPTDADTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSG---QYVAPTV 372

Query: 420 IVNVNHTMKLMQEEI 434
             +    MK+++EEI
Sbjct: 373 FGDCRDDMKIVREEI 387

Burkholderia ambifaria (strain MC40-6) (taxid: 398577)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|A4XPI6|BETB_PSEMY Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1

 Score =  159 bits (403), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 181/376 (48%), Gaps = 28/376 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + L      S+A+VD  VA A + QKVWA  +  QR + LR  +  + E  + + E
Sbjct: 29  PATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAE 88

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVE 185
           + + DTGK + +    +I+T  + + +        EGE+    E      S ++ + +  
Sbjct: 89  LETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRE-----SSFVYTRRE-- 141

Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
             PLGVV  I +WNYP          A+ +GN ++ K SE  S +      I   A    
Sbjct: 142 --PLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEA---- 195

Query: 246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGG 301
           G P  + +V+TG   E G+ L     ++K+ F G    G+ +M +AS + L  VT+ELGG
Sbjct: 196 GLPAGVFNVLTGSGREVGQWLTEHPGIEKVSFTGGTVTGKKVMASASSSSLKEVTMELGG 255

Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
           K   IV +D D+   A IAV A   SSGQ C    R +V R + A F ++V + VK +  
Sbjct: 256 KSPLIVFEDADLDRAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAKVLERVKRIRL 315

Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFGHLSEGAVDQYFPPT 418
           G PL    + G L    H E +   +     +GA +L  G   S G  ++GA   Y  PT
Sbjct: 316 GDPLDDATNFGPLVSYAHMESVLGYIEKGRSEGARLLIGGTRVSDGDYAKGA---YVAPT 372

Query: 419 VIVNVNHTMKLMQEEI 434
           V  +    M +++EEI
Sbjct: 373 VFTDCRDDMTIVREEI 388

Pseudomonas mendocina (strain ymp) (taxid: 399739)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1

 Score =  159 bits (401), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 21/395 (5%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKS 105
           ++I    R P  + ++    PAT + +G  PA +  +VD  V  AR+A      K WAK+
Sbjct: 10  LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
               R ++LR +   + E +  + ++ + D GK + +A    + +  C +    L+EG  
Sbjct: 70  PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127

Query: 165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
            L  + ++     M   K+ V   PLGVVG I  WNYP       +  ++ +G   ++K 
Sbjct: 128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186

Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
           SE AS + C     I      VG P  +++V+TGF +E G  L S   VDKI F GS   
Sbjct: 187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242

Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
           G  +M  A++ + PV++ELGGK   IV DDVD+   A+ A+     ++GQ C+   R  V
Sbjct: 243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302

Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
           H  I + F+ ++ K  K++    P+     +G +      EK+   ++ A  +GA IL  
Sbjct: 303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362

Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           GS   HL +G    +  PT+I +V  +M++ +EE+
Sbjct: 363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEV 394

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
255556370	593	aldehyde dehydrogenase, putative [Ricinu	0.984	0.728	0.886	0.0
224101571	594	predicted protein [Populus trichocarpa]	0.984	0.727	0.868	0.0
356564784	596	PREDICTED: aldehyde dehydrogenase 22A1-l	0.986	0.726	0.849	0.0
225431946	593	PREDICTED: aldehyde dehydrogenase 22A1 [	0.977	0.723	0.859	0.0
12321913	578	betaine aldehyde dehydrogenase, putative	0.986	0.749	0.840	0.0
297833440	594	ALDH22a1 [Arabidopsis lyrata subsp. lyra	0.986	0.728	0.840	0.0
356521770	597	PREDICTED: aldehyde dehydrogenase 22A1-l	0.986	0.725	0.840	0.0
42572293	596	aldehyde dehydrogenase 22A1 [Arabidopsis	0.986	0.726	0.840	0.0
42563558	554	aldehyde dehydrogenase 22A1 [Arabidopsis	0.986	0.781	0.840	0.0
110735945	596	betaine aldehyde dehydrogenase like prot	0.986	0.726	0.838	0.0

>gi|255556370|ref|XP_002519219.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223541534|gb|EEF43083.1| aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/433 (88%), Positives = 410/433 (94%), Gaps = 1/433 (0%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           MAF + +IVLAFAYAICRFLLMLIP NVPSIDVDASDVLD GNQ  +NSFIYIPPRGRT 
Sbjct: 1   MAFWWPIIVLAFAYAICRFLLMLIPTNVPSIDVDASDVLD-GNQKEENSFIYIPPRGRTQ 59

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           Q E KVQCYEPATMKYLG+FPALS  EV ERV QARKAQ++WAKSSFKQRRQFLRILLKY
Sbjct: 60  QQERKVQCYEPATMKYLGFFPALSPTEVKERVTQARKAQRIWAKSSFKQRRQFLRILLKY 119

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTM+DASLGEIMTTCEKITWLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 120 IIEHQELICEVSSRDTGKTMIDASLGEIMTTCEKITWLLSEGEQWLKPEYRSSGRSMLHK 179

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           KAKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSGCFYFRIIQA
Sbjct: 180 KAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGCFYFRIIQA 239

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVD+ITGFAETGEALVSS DK+IFVGSPGVG+MIMRNA+ TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDIITGFAETGEALVSSADKVIFVGSPGVGKMIMRNAANTLVPVTLELG 299

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FVS+VAKIVKSVS
Sbjct: 300 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHKDIYSSFVSEVAKIVKSVS 359

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHS+KLQNLVNDA+DKGA I ARGSFGHL EGAVDQYFPPT++
Sbjct: 360 AGPPLTGRYDMGAICLQEHSDKLQNLVNDAIDKGAVIEARGSFGHLGEGAVDQYFPPTIL 419

Query: 421 VNVNHTMKLMQEE 433
           VNVNHTMKLM+EE
Sbjct: 420 VNVNHTMKLMREE 432

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101571|ref|XP_002312334.1| predicted protein [Populus trichocarpa] gi|222852154|gb|EEE89701.1| predicted protein [Populus trichocarpa]

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/433 (86%), Positives = 403/433 (93%), Gaps = 1/433 (0%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           MAF + LIV A AYAICRFLLMLIP NVPSIDVDASDV  +GNQT +NSFIYIPPRGR  
Sbjct: 1   MAFWWPLIVAASAYAICRFLLMLIPFNVPSIDVDASDV-TEGNQTQENSFIYIPPRGRAQ 59

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLG+FPALS AEV +RVAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60  QSDKKVQCYEPATMKYLGFFPALSPAEVHDRVAQARKAQKIWAESSFKQRRQFLRILLKY 119

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR SGR+M +K
Sbjct: 120 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRCSGRAMFYK 179

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           K++VEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGN IVIKVSENASWSG FYFRIIQA
Sbjct: 180 KSRVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSENASWSGLFYFRIIQA 239

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+MIMRNAS TL PVTLELG
Sbjct: 240 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKMIMRNASDTLIPVTLELG 299

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKD FIVC+D DV HVAQIAVRA LQSSGQNCAGAERFYVHRDIY+ FVS+V KIVKSVS
Sbjct: 300 GKDPFIVCEDADVSHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYSSFVSEVTKIVKSVS 359

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
            GPPLAG+YDMGA+CL EHS+KLQ LVNDAL+KGAEI+ RGSFGHL EGAVDQ++PPTV+
Sbjct: 360 VGPPLAGRYDMGAICLQEHSDKLQILVNDALEKGAEIVVRGSFGHLGEGAVDQFYPPTVL 419

Query: 421 VNVNHTMKLMQEE 433
           VNV+HTMKLMQEE
Sbjct: 420 VNVDHTMKLMQEE 432

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564784|ref|XP_003550628.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max]

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/433 (84%), Positives = 402/433 (92%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ  +NSFIY+PPRG + 
Sbjct: 1   MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS   VQCYEPATMKYLGY PAL+R EV +RVA+ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61  QSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           +AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NA+ TLTPVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVT 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVI 420

Query: 421 VNVNHTMKLMQEE 433
           VNVNHTM+LMQEE
Sbjct: 421 VNVNHTMRLMQEE 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431946|ref|XP_002277743.1| PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera]

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/433 (85%), Positives = 405/433 (93%), Gaps = 4/433 (0%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           MAF + L+VL FA+A+CRFLLMLIPPNVPSIDVDASDVLDDG +T +NSFIYIP RGRTP
Sbjct: 1   MAFWWPLLVLGFAFALCRFLLMLIPPNVPSIDVDASDVLDDG-KTKENSFIYIPSRGRTP 59

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           +   KVQCYEPATMKYLG+ PAL   EV E VAQARKAQK+WA+SSFKQRRQFLRILLKY
Sbjct: 60  E---KVQCYEPATMKYLGFCPALRPDEVREHVAQARKAQKIWARSSFKQRRQFLRILLKY 116

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPEYRS+GRSM+HK
Sbjct: 117 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHK 176

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAAVFSGNG+VIKVSE+ASWSGCFY RIIQA
Sbjct: 177 TAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQA 236

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVG+ IMRNAS TL PVTLELG
Sbjct: 237 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELG 296

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFIVC+DVDVPHVAQIAVRAALQSSGQNCAGAERFYVH+DIY+ FV++V +IVKSV+
Sbjct: 297 GKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVT 356

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL+GKYDMGA+C+ EHSEKLQNLVN+ALDKGAE   RGSFG+L E AVDQ+FPPTV+
Sbjct: 357 AGPPLSGKYDMGAICMQEHSEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVL 416

Query: 421 VNVNHTMKLMQEE 433
           VNVNH+M+LMQEE
Sbjct: 417 VNVNHSMQLMQEE 429

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12321913|gb|AAG50992.1|AC036106_5 betaine aldehyde dehydrogenase, putative; 22009-25681 [Arabidopsis thaliana]

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 396/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833440|ref|XP_002884602.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata] gi|297330442|gb|EFH60861.1| ALDH22a1 [Arabidopsis lyrata subsp. lyrata]

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 397/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGEQWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HV+Q+AVR  LQSSGQNCAGAERFYVH+DIY  F+SQV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVSQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFISQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521770|ref|XP_003529524.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max]

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 400/433 (92%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           MAF + L+VLAFAY ICRFLLMLIPP VPSIDVD SDVLDDGNQ  +NSFIY+PPRG + 
Sbjct: 1   MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS   VQCYEPATMKYLGY PAL+  EV +RV++ RKAQK+WAKSSFKQRR FLRILLKY
Sbjct: 61  QSGKIVQCYEPATMKYLGYVPALTHEEVKDRVSKVRKAQKMWAKSSFKQRRLFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           II+HQ LICEISSRDTGKTMVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK
Sbjct: 121 IIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           +AKVEFHPLGV+GAIVSWNYPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+
Sbjct: 181 RAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQS 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAA+GAPE+LV+VITGFAETGEALVSSVDK+IFVGSPGVG+MIM NAS TL PVTLELG
Sbjct: 241 ALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNASNTLIPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFIVC+DVD+ HVAQIAVRA LQSSGQNCAGAERFYVHR+IY+ FVS+V KIVKSV+
Sbjct: 301 GKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVT 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL GKYDMGALC+ EHSEKL+ LVNDALDKGAEI+ARG+ GH+ E AVDQYFPPTVI
Sbjct: 361 AGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGNLGHIGEDAVDQYFPPTVI 420

Query: 421 VNVNHTMKLMQEE 433
           VNVNHTM+LMQEE
Sbjct: 421 VNVNHTMRLMQEE 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572293|ref|NP_974242.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|118595572|sp|Q0WSF1.2|AL221_ARATH RecName: Full=Aldehyde dehydrogenase 22A1; AltName: Full=Novel aldehyde dehydrogenase family 22 member A1; Flags: Precursor gi|42406419|emb|CAE48165.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] gi|332640912|gb|AEE74433.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana]

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 396/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563558|ref|NP_187321.2| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|332640913|gb|AEE74434.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana]

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/433 (84%), Positives = 396/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110735945|dbj|BAE99947.1| betaine aldehyde dehydrogenase like protein [Arabidopsis thaliana]

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/433 (83%), Positives = 395/433 (91%)

Query: 1   MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
           M F + LIVLAFAYAIC+FLLMLIPPNVPSID DASDVL  G  T +NSFIYIPPRGR+ 
Sbjct: 1   MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDADASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct: 61  QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
           IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct: 121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct: 181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
           ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct: 241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct: 301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct: 361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query: 421 VNVNHTMKLMQEE 433
           +NVNH MK+M+EE
Sbjct: 421 INVNHNMKIMKEE 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
TAIR|locus:2103425	596	ALDH22A1 "AT3G66658" [Arabidop	0.986	0.726	0.840	9.7e-199
UNIPROTKB|G5EHY1	632	MGCH7_ch7g516 "Succinate-semia	0.881	0.612	0.407	6.2e-78
CGD|CAL0001732	614	orf19.1865 [Candida albicans (	0.979	0.700	0.376	9e-77
DICTYBASE|DDB_G0279613	589	DDB_G0279613 "aldehyde dehydro	0.835	0.623	0.424	1.1e-76
SGD|S000001081	644	MSC7 "Protein of unknown funct	0.842	0.574	0.397	3e-69
POMBASE|SPBC21C3.15c	522	SPBC21C3.15c "aldehyde dehydro	0.831	0.699	0.371	1.1e-66
ASPGD|ASPL0000002032	642	AN6636 [Emericella nidulans (t	0.767	0.524	0.385	5e-60
UNIPROTKB|P96405	487	MT0233 "PROBABLE ALDEHYDE DEHY	0.845	0.761	0.289	2.6e-40
TIGR_CMR|BA_0849	479	BA_0849 "glyceraldehyde-3-phos	0.838	0.768	0.314	7.8e-39
TAIR|locus:2027186	501	ALDH10A8 "AT1G74920" [Arabidop	0.851	0.746	0.306	1.6e-38

TAIR|locus:2103425 ALDH22A1 "AT3G66658" [Arabidopsis thaliana (taxid:3702)]

 Score = 1924 (682.3 bits), Expect = 9.7e-199, P = 9.7e-199
 Identities = 364/433 (84%), Positives = 396/433 (91%)

Query:     1 MAFLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTP 60
             M F + LIVLAFAYAIC+FLLMLIPPNVPSIDVDASDVL  G  T +NSFIYIPPRGR+ 
Sbjct:     1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPPRGRSQ 60

Query:    61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
             QS+ KVQCYEPATMKYLGYFPALS  EV+ERV  +RKAQK WA+SSFK RRQFLRILLKY
Sbjct:    61 QSDKKVQCYEPATMKYLGYFPALSPTEVEERVTLSRKAQKTWAQSSFKLRRQFLRILLKY 120

Query:   121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK 180
             IIEHQELICE+SSRDTGKTMVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK
Sbjct:   121 IIEHQELICEVSSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHK 180

Query:   181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
              ++VEFHPLGV+GAIV WNYPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQA
Sbjct:   181 VSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQA 240

Query:   241 ALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
             ALAAVGAPENLVDVITGFAETGEALVSSVDK+IFVGS  VG+MIMRNA++TLTPVTLELG
Sbjct:   241 ALAAVGAPENLVDVITGFAETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELG 300

Query:   301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
             GKDAFI+C+D DV HVAQ+AVR  LQSSGQNCAGAERFYVH+DIY  F+ QV KIVKSVS
Sbjct:   301 GKDAFIICEDADVSHVAQVAVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVS 360

Query:   361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
             AGPPL G+YDMGA+CL EHSE LQ+LVNDALDKGAEI  RGSFGHL E AVDQYFPPTV+
Sbjct:   361 AGPPLTGRYDMGAICLQEHSEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVL 420

Query:   421 VNVNHTMKLMQEE 433
             +NVNH MK+M+EE
Sbjct:   421 INVNHNMKIMKEE 433

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

UNIPROTKB|G5EHY1 MGCH7_ch7g516 "Succinate-semialdehyde dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 161/395 (40%), Positives = 242/395 (61%)

Query:    44 QTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA 103
             +TP+   I   P  +   S T +QCY PAT ++LG+    + A +D  + QA  AQK WA
Sbjct:    87 KTPEMVEILQKPSIKVSGS-TAIQCYNPATGQFLGFVNPATPAAIDRAIEQAATAQKKWA 145

Query:   104 KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE 163
              +SF++RR+ LR +L+YI+++QE IC ++  D+GKTMVDA LGEI+ T EK+ W ++ GE
Sbjct:   146 LTSFRERRKVLRSMLQYILDNQEEICRVAGMDSGKTMVDAQLGEILVTVEKLQWTIAHGE 205

Query:   164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
             K L+PE R +   M++K+  V + PLGV+ A+VSWNYPFHN+  P+++A+F+GNGI++KV
Sbjct:   206 KALRPERRPTNLLMMYKRNSVHYEPLGVIAALVSWNYPFHNLLGPIISAIFAGNGILVKV 265

Query:   224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG 281
             SEN +WS  ++  I + AL A G   +L+  +  + +    + S   +  I F+GS  V 
Sbjct:   266 SENTAWSSSYFASIARGALFAHGYDPSLIQTVACWPQVAGHITSHKGISHITFIGSQAVA 325

Query:   282 RMIMRNASKTLTPVTLELGGKDAFIVCDDV--DVPHVAQIAVRAALQSSGQNCAGAERFY 339
               +  +A+K LTPV  ELGGKDAFIV D    D+  + ++ +R   QS+GQNC G ER  
Sbjct:   326 HKVAESAAKVLTPVCAELGGKDAFIVLDSAAKDLNRIVEMMLRGTFQSAGQNCIGIERII 385

Query:   340 VHRDIYALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
                 +Y   V  +A+ V+ +  GP PL    D+GA+      ++L++LV DA+  GA +L
Sbjct:   386 ATPAVYDRIVLALAERVRGLRVGPGPLDA--DVGAMVSDASFDRLEHLVADAVRCGARLL 443

Query:   399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
             A G      +     YF PT++V+V   M L +EE
Sbjct:   444 AGGKRLIHPQHPSGHYFTPTLVVDVTPDMALAREE 478

GO:0005575 "cellular_component" evidence=ND

CGD|CAL0001732 orf19.1865 [Candida albicans (taxid:5476)]

 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 167/443 (37%), Positives = 246/443 (55%)

Query:     3 FLFSLIVLAFAYAICRFLLMLIPPNVPSIDVDASDVL---DDGNQTPDNSFIYIPPRGRT 59
             F   +IV    Y   +++    P N   I+      L   ++         +Y PP    
Sbjct:    21 FFIGVIVPVLYYVYNKYITAQ-PNNYNKIEAPVKITLPIPEEARPHWKGKRLY-PPSISI 78

Query:    60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
             P    K+Q Y PAT +YLG F   +R ++DE +  A KAQK WA SSF  RR+ L+ +  
Sbjct:    79 PNEPDKIQSYCPATGQYLGVFNCTTREDMDEMINNASKAQKKWANSSFSLRRKLLKTMAS 138

Query:   120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
             +I+E+QE I  ++ RD+GKT +DAS+GEIM T EK+ W++S GEK L+P  R    + + 
Sbjct:   139 FILENQENIARVACRDSGKTKLDASMGEIMVTLEKLNWIISHGEKVLRPSQRPGPANFLI 198

Query:   179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
                K A+V + P+GVV +IVSWNYPFHN+  P++A++F+GN I++K SEN  WS  ++ +
Sbjct:   199 GMMKNAEVRYEPMGVVTSIVSWNYPFHNLMGPVIASLFTGNAIIVKCSENVVWSSQWFIK 258

Query:   237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
              ++  L  +   ENLV +   F    E  VS   +  I F+GS  V   ++  A+K LTP
Sbjct:   259 FVRKCLQELDIDENLVQLCCCFPNDAEYFVSHPGLSHITFIGSKNVAHHVVSQAAKQLTP 318

Query:   295 VTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
               +ELGGKDA IV DDV DV  ++ + +R   QS+GQNC G ER      +Y   V    
Sbjct:   319 CVVELGGKDALIVLDDVKDVQSLSSVILRGTFQSAGQNCIGVERVICLPKVYEQLVEIFT 378

Query:   354 KIVKSVSAGPPL--AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 411
             + +KS   G  +    + DMGA+       +L+ L+ DA+ KGA ++  G          
Sbjct:   379 ERIKSFRVGSDIDQLDEIDMGAMISDNRFAQLEGLIEDAVSKGARLIHGGKQYQHPNYPQ 438

Query:   412 DQYFPPTVIVNVNHTMKLMQEEI 434
               YF PT++V+V+ TMK+ QEE+
Sbjct:   439 GHYFEPTLLVDVDPTMKIFQEEV 461

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007131 "reciprocal meiotic recombination" evidence=IEA

DICTYBASE|DDB_G0279613 DDB_G0279613 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 157/370 (42%), Positives = 225/370 (60%)

Query:    65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
             K+ C  PAT K +G   +L   EV   +  A+KAQ  W +++F +RRQ L+  +   I+H
Sbjct:    67 KIDCVNPATGKSMGIVNSLKPDEVKTCLEAAQKAQVEWGQTTFDERRQILQDFIDMFIKH 126

Query:   125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
             +  + E S RDTGKT  +A  GEI+T+CEK+ +L+  GEK LK E R     M  K A++
Sbjct:   127 ENELVEASMRDTGKTRFEAMFGEILTSCEKLRYLIQNGEKALKTEDRIVPMLMGTKSARL 186

Query:   185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
             E+HPLGV+G I+ WNYP H+I +   AA+F+GN  ++KVSE ++ S   +  +++  L+ 
Sbjct:   187 EYHPLGVIGIIIPWNYPIHSIISAAAAAIFAGNAALVKVSEWSTHSKILFEHLLRKVLSN 246

Query:   245 VGAPENLVDVITGFAETGEALV-SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
              G   NL+ ++ G  ETGEALV S VDKI+F+GSPG G+ +M+ AS +LTPV LELGGKD
Sbjct:   247 RGYDPNLIQILPGMGETGEALVRSGVDKILFIGSPGTGKRVMKAASDSLTPVILELGGKD 306

Query:   304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
               IV DDV++     I  R    + GQNC  +ER +VH  IY  F  Q+A  + S+  GP
Sbjct:   307 PMIVFDDVELDWALAIVQRGCFINLGQNCISSERVFVHEKIYDQFCKQMADKINSLKQGP 366

Query:   364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
             P  G +D G++ +    +K+++LV  A+ +GA +LA G            YF PTV+ NV
Sbjct:   367 PEEGHFDFGSMTMPAQVDKVEHLVGTAIKEGATLLAGGKRNPAYPKG--NYFLPTVLANV 424

Query:   424 NHTMKLMQEE 433
                M + QEE
Sbjct:   425 TENMTIFQEE 434

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

SGD|S000001081 MSC7 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 157/395 (39%), Positives = 231/395 (58%)

Query:    60 PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
             P+    +QC+ PAT +YLG FP+ + A++DE V++A KAQ  W  S F +R + L  L  
Sbjct:   106 PEEPNFIQCHCPATGQYLGSFPSKTEADIDEMVSKAGKAQSTWGNSDFSRRLRVLASLHD 165

Query:   120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI- 178
             YI+ +Q+LI  ++ RD+GKTM+DAS+GEI+ T EKI W +  G++ L+P  R    +   
Sbjct:   166 YILNNQDLIARVACRDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFM 225

Query:   179 --HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
               +K A++ + PLGV+ +IVSWNYPFHN+  P++AA+F+GN IV+K SE   WS  F+  
Sbjct:   226 KWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVE 285

Query:   237 IIQAALAAVGAPENLVDVI-----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS 289
             +I+  L A     +LV +      T   ++     S      I F+GS  V   I++ A+
Sbjct:   286 LIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAA 345

Query:   290 KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
             K+LTPV +ELGGKDAFIV D   ++  ++ I +R   QSSGQNC G ER  V ++ Y   
Sbjct:   346 KSLTPVVVELGGKDAFIVLDSAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY--- 402

Query:   349 VSQVAKIVKS-VSAGPPLAGK-------YDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
                + KI+   ++A P   G         DMGA+      ++L+ LV DA+ KGA +L  
Sbjct:   403 -DDLVKILNDRMTANPLRQGSDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQG 461

Query:   401 GS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
             GS F H  +     YF PT++V+V   MK+ Q E+
Sbjct:   462 GSRFKH-PKYPQGHYFQPTLLVDVTPEMKIAQNEV 495

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=ISM

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0007131 "reciprocal meiotic recombination" evidence=IMP

GO:0008152 "metabolic process" evidence=IEA

POMBASE|SPBC21C3.15c SPBC21C3.15c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 137/369 (37%), Positives = 216/369 (58%)

Query:    68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
             CY P     LG     +++++D+ +  A +AQK W  +SF +RR FL+ L + II +Q+ 
Sbjct:     7 CYCPGDGSLLGEVKLFNKSDIDQSIILAEEAQKEWKSTSFAERRNFLKALKENIIRNQDK 66

Query:   128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
               EI+ +DTGKT+VDA+ GEI+ T EKI W L+ GE+ L+P  R +     +K   V++ 
Sbjct:    67 YAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYE 126

Query:   188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
             PLGV+ A+VSWNYP HN   P+++A+F+GN IV+K SE  +WS   Y  ++++ L ++G 
Sbjct:   127 PLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGH 186

Query:   248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
                LV  IT   +  + L S   +  I F+GS  + +++  +A+K LTP+ LELGGKD  
Sbjct:   187 SPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPC 246

Query:   306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
             I+ DD  +  +  I +R   QS+GQNC G ER      +Y   ++++   + ++  G   
Sbjct:   247 ILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYT 306

Query:   366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVN 424
                 DMGA+      + L++L+ DA+ KGA ++  G  F H  +     YF PT++V+  
Sbjct:   307 QNDVDMGAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQH-PKYPKGNYFLPTLLVDAT 365

Query:   425 HTMKLMQEE 433
             + MK+ QEE
Sbjct:   366 NEMKIAQEE 374

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

ASPGD|ASPL0000002032 AN6636 [Emericella nidulans (taxid:162425)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 135/350 (38%), Positives = 201/350 (57%)

Query:    26 PNVPSIDV--DASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG--YFP 81
             PN P I+   + S   D    + + + I    RG+   +E  +  Y PA  + LG    P
Sbjct:    60 PNPPEINPHWEGSKWEDLPQGSEERNVIEGQIRGQW--NENLIMSYCPADGRVLGSGIKP 117

Query:    82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141
             A +  +VD  +  A +AQ+ WA ++F +RR+ L+ LLKY++EHQ+ I      D+GKT V
Sbjct:   118 ATAD-DVDRAIQAASRAQEQWATTTFAERRRVLKTLLKYVLEHQDEIVIACCLDSGKTKV 176

Query:   142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
             DA+ GE + T EK+ W +  GE+ L PE R +   M++KK +V + PLGVV A VSWNYP
Sbjct:   177 DATFGETLVTAEKLKWTIDHGERALSPESRPTNFLMMYKKNQVIYEPLGVVSACVSWNYP 236

Query:   202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 261
             FHN  +P+++A+F+GNGIV+K SE  +WS  ++  II+ AL   G P +LV  +    + 
Sbjct:   237 FHNFISPVISAIFAGNGIVVKPSEQTAWSSVYFLNIIRGALENCGHPRDLVQSVVCLPKV 296

Query:   262 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV----DVPH 315
              + L S   + +I F+GS  V   +  +A+K LTPVT+ELGGKD  ++ DD     +V  
Sbjct:   297 ADHLTSHPGIAQITFIGSRPVAHKVCESAAKALTPVTVELGGKDPSVILDDSRTISEVTS 356

Query:   316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
             VA + +R   QS+GQNC G ER      +Y   +  V   +K++  G  L
Sbjct:   357 VASVLMRGVFQSAGQNCIGVERVIALPGVYDKLLDTVTSRIKALRLGSVL 406

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007131 "reciprocal meiotic recombination" evidence=IEA

UNIPROTKB|P96405 MT0233 "PROBABLE ALDEHYDE DEHYDROGENASE" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 113/391 (28%), Positives = 191/391 (48%)

Query:    51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
             ++I  +   P +   ++   PAT +Y+G  P  + A+VD  VA AR A     W  +   
Sbjct:    11 LFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPH 70

Query:   109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WL 166
             +R   +   +K + E ++L  ++ + +TG+          M +   + +     +K  W 
Sbjct:    71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130

Query:   167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
             +    S G+S++ ++      P+GVVGAIV+WN P     N +  A+ +G  IV+K +  
Sbjct:   131 ETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184

Query:   227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 284
                +       +    A VG PE ++ V+ G  ETG+AL S+  +D   F GS  VGR +
Sbjct:   185 TPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV 240

Query:   285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
              R A++ L P TLELGGK A I+ +DVD+     + V + + ++GQ C    R    R  
Sbjct:   241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300

Query:   345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
             Y   V+ V   V ++  GPP      +G L   +   +++  +   +++GA ++  G  G
Sbjct:   301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG--G 358

Query:   405 HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
                EG  + +F  PTV  +V++ M + QEEI
Sbjct:   359 R-PEGLDNGFFIQPTVFADVDNKMTIAQEEI 388

GO:0005524 "ATP binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016208 "AMP binding" evidence=IDA

GO:0043531 "ADP binding" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0070404 "NADH binding" evidence=IDA

GO:0071949 "FAD binding" evidence=IDA

TIGR_CMR|BA_0849 BA_0849 "glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 126/401 (31%), Positives = 204/401 (50%)

Query:    45 TPDNSF-IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA 103
             T  N++  Y+    R   S   ++   P   + +G   A++R EVDE +A A++AQK WA
Sbjct:     2 TTSNTYKFYLNGEWRESSSGETIEIPSPYLHEVIGQVQAITRGEVDEAIASAKEAQKSWA 61

Query:   104 KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-- 161
             ++S + R ++L      ++  Q+ I +I  ++ GK   DA   E++ T + I + + E  
Sbjct:    62 EASLQDRAKYLYKWADELVNMQDEIADIIMKEVGKGYKDAKK-EVVRTADFIRYTIEEAL 120

Query:   162 ---GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA-AVFSGN 217
                GE  +   +    +S   K A ++  PLGVV AI  +NYP  N+    LA A+  GN
Sbjct:   121 HMHGESMMGDSFPGGTKS---KLAIIQRAPLGVVLAIAPFNYPV-NLSAAKLAPALIMGN 176

Query:   218 GIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIF 274
              ++ K +   + SG    ++++A L   G P+ LV+V TG     G+ LV    ++ + F
Sbjct:   177 AVIFKPATQGAISG---IKMVEA-LHKAGLPQGLVNVATGRGSVIGDYLVEHEGINMVSF 232

Query:   275 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 334
              G    G+ + + AS  + P+ LELGGKD  IV +D D+   A   V  A   SGQ C  
Sbjct:   233 TGGTNTGKHLAKKAS--MIPLVLELGGKDPGIVREDADLQDAANHIVSGAFSYSGQRCTA 290

Query:   335 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH--SEKLQNLVNDALD 392
              +R  VH ++    VS V + V  +S G P   + D   + L++   ++ +Q LV+DA++
Sbjct:   291 IKRVLVHENVADELVSLVKEQVAKLSVGSP---EQDSTIVPLIDDKSADLVQGLVDDAVE 347

Query:   393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
             KGA I+     G+  E  +  Y  PT+I +V   MK+  EE
Sbjct:   348 KGATIV----IGNKRERNLI-Y--PTLIDHVTEEMKVAWEE 381

GO:0008152 "metabolic process" evidence=ISS

GO:0008886 "glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity" evidence=ISS

TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 121/395 (30%), Positives = 197/395 (49%)

Query:    51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKS 105
             ++I    R P  + ++    PAT + +G  PA +  +VD  V  AR+A      K WAK+
Sbjct:    10 LFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKA 69

Query:   106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCEKITWLLSEGEK 164
                 R ++LR +   + E +  + ++ + D GK + +A    + +  C +    L+EG  
Sbjct:    70 PGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEG-- 127

Query:   165 WLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
              L  + ++     M   K+ V   PLGVVG I  WNYP       +  ++ +G   ++K 
Sbjct:   128 -LDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186

Query:   224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGV 280
             SE AS + C     I      VG P  +++V+TGF +E G  L S   VDKI F GS   
Sbjct:   187 SELASVT-CLELADI---CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFAT 242

Query:   281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
             G  +M  A++ + PV++ELGGK   IV DDVD+   A+ A+     ++GQ C+   R  V
Sbjct:   243 GSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLV 302

Query:   341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
             H  I + F+ ++ K  K++    P+     +G +      EK+   ++ A  +GA IL  
Sbjct:   303 HESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHG 362

Query:   401 GSFG-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
             GS   HL +G    +  PT+I +V  +M++ +EE+
Sbjct:   363 GSRPEHLEKGF---FIEPTIITDVTTSMQIWREEV 394

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009516 "leucoplast" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0WSF1	AL221_ARATH	1, ., 2, ., 1, ., 3	0.8406	0.9863	0.7265	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	439
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	0.0
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-113
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-106
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-102
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-102
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	7e-82
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-76
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-75
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-72
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	2e-71
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	1e-70
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-69
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	6e-67
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-64
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	5e-64
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	6e-63
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	2e-62
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	2e-61
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	4e-61
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	5e-61
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	2e-60
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	2e-59
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	4e-59
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	8e-59
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	2e-58
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	4e-58
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	2e-57
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	3e-57
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	4e-57
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	4e-57
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	5e-57
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	2e-56
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	2e-56
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	4e-55
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	6e-55
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	8e-55
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	3e-54
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	5e-54
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	5e-54
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	2e-53
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	2e-53
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	1e-51
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	1e-51
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	2e-51
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	3e-51
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	8e-51
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	6e-50
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-49
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	2e-48
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	7e-48
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	9e-48
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-47
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-47
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	3e-47
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	4e-47
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	8e-47
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	8e-47
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	9e-47
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	6e-46
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-45
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	2e-45
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	3e-44
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	6e-43
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-42
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	2e-42
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	3e-42
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	4e-42
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	9e-42
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	7e-41
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	4e-40
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	4e-40
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	4e-40
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	3e-39
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	1e-38
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	4e-38
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	9e-38
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	1e-37
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	4e-37
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	2e-35
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	4e-35
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	7e-35
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	7e-35
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	5e-32
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	8e-32
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-31
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-30
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	7e-30
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	4e-29
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	5e-28
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	2e-27
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	2e-27
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-25
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	4e-23
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	5e-21
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-20
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	4e-19
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	8e-18
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	4e-16
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	4e-15
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	3e-14
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	5e-14
cd07121	429	cd07121, ALDH_EutE, Ethanolamine utilization prote	3e-13
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	9e-13
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	9e-13
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	1e-12
PRK15398	465	PRK15398, PRK15398, aldehyde dehydrogenase EutE; P	2e-10
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	6e-10
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	1e-08
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	2e-06
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	3e-05
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	5e-05
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	1e-04
TIGR02288	551	TIGR02288, PaaN_2, phenylacetic acid degradation p	3e-04
cd07127	549	cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat	0.003

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  591 bits (1527), Expect = 0.0
 Identities = 193/367 (52%), Positives = 251/367 (68%), Gaps = 2/367 (0%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           Y+PAT ++LG  PA +  +VDE +A AR AQ+ WAK+SF +RR+ LR LLKYI+E+QE I
Sbjct: 1   YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
           C ++ RDTGKTMVDASLGEI+ TCEKI W L  GEK L+PE R  G  M +K+A+VE+ P
Sbjct: 61  CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120

Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           LGVVGAIVSWNYPFHN+  P++AA+F+GN IV+KVSE  +WS  F+  II+  LAA G  
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180

Query: 249 ENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
            +LV ++T   ET EAL S    D I F+GSP VG+ +M  A+++LTPV LELGGKD  I
Sbjct: 181 PDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240

Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
           V DD D+  +A I +R   QSSGQNC G ER  VH  IY   +  +   V+++  GPPL 
Sbjct: 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLD 300

Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
           G  D+GA+      ++L+ LV DA++KGA +LA G      E     YFPPT++V+V   
Sbjct: 301 GDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPD 360

Query: 427 MKLMQEE 433
           MK+ QEE
Sbjct: 361 MKIAQEE 367

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  338 bits (869), Expect = e-113
 Identities = 120/349 (34%), Positives = 173/349 (49%), Gaps = 14/349 (4%)

Query: 89  DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
           D  VA AR A K WA     +R   LR L   + E +E +  + + +TGK  ++ +LGE+
Sbjct: 1   DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEV 59

Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
               +   +      +       S       + A V   PLGVVGAI  WN+P       
Sbjct: 60  ARAADTFRYYAGLARRLHGEVIPSPDP---GELAIVRREPLGVVGAITPWNFPLLLAAWK 116

Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS 267
           +  A+ +GN +V+K SE    +      ++  A    G P  +++V+TG   E G AL S
Sbjct: 117 LAPALAAGNTVVLKPSELTPLTALLLAELLAEA----GLPPGVLNVVTGDGDEVGAALAS 172

Query: 268 S--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 325
              VDKI F GS  VG+ IMR A++ L  VTLELGGK   IV DD D+    + AV  A 
Sbjct: 173 HPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF 232

Query: 326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 385
            ++GQ C  A R  VH  IY  FV ++ + VK++  G PL    DMG L      +++  
Sbjct: 233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLA 292

Query: 386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            + DA  +GA++L  G      +G    + PPTV+ +V+  M + QEEI
Sbjct: 293 YIEDAKAEGAKLLCGGKRLEGGKGY---FVPPTVLTDVDPDMPIAQEEI 338

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  320 bits (823), Expect = e-106
 Identities = 133/366 (36%), Positives = 192/366 (52%), Gaps = 10/366 (2%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + LG  P    AEV   VA+AR AQ+ WA    + R Q L    + + +H + + E
Sbjct: 3   PATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAE 62

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           +   +TGK   DA   E++   E I W      + L P    +G  M +KKA VE+ P G
Sbjct: 63  LLHAETGKPRADA-GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYG 121

Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
           VVG I  WNYP       ++ A+ +GN +V+K SE     G      +  A AA G P+ 
Sbjct: 122 VVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL----LAEAWAAAGPPQG 177

Query: 251 LVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309
           ++ V+TG   TG AL+ + VDK+ F GS   GR +M  A++ L PV LELGGKD  IV  
Sbjct: 178 VLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLA 237

Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+   A  AV  A+ ++GQ C   ER YVH  +Y  FV+++    +++  G    G  
Sbjct: 238 DADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDA 297

Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           D+G +      + ++  V+DA+ KGA+ L  G  G  S G    ++ PTV+ +V H M +
Sbjct: 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALT-G--GARSNGG-GPFYEPTVLTDVPHDMDV 353

Query: 430 MQEEII 435
           M+EE  
Sbjct: 354 MREETF 359

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  312 bits (802), Expect = e-102
 Identities = 127/379 (33%), Positives = 192/379 (50%), Gaps = 16/379 (4%)

Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
              S   ++   PAT + +   PA +  +VD  VA AR A K WAK+   +R   L    
Sbjct: 2   VDSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAA 61

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
             + E ++ + E+ + +TGK + +A  GE+    + + +      K L+ E   S     
Sbjct: 62  DLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARK-LEGETLPSDPG-- 117

Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
              A     PLGVVGAI  WN+P       +  A+ +GN +V+K SE    +      + 
Sbjct: 118 -VLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176

Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
           + A    G P  +++V+TG  +E G+ALV    VDK+ F GS  VGR I + A+K L  V
Sbjct: 177 EEA----GLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRV 232

Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
           TLELGGK+  IV DD D+    + AV  A  ++GQ C    R  VH  IY  FV ++ + 
Sbjct: 233 TLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEA 292

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            KS+  G PL    D+G L   +  E++ + + DA ++GA++L  G  G L +G    + 
Sbjct: 293 AKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAG-LEKGY---FV 348

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PTV+ +V   M++ QEEI
Sbjct: 349 EPTVLADVTPDMRIAQEEI 367

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  311 bits (799), Expect = e-102
 Identities = 120/376 (31%), Positives = 181/376 (48%), Gaps = 18/376 (4%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
             + ++   PAT + +   PA +  +VD  VA AR A + W++ S ++R   LR +   +
Sbjct: 12  GASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLL 71

Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
               E +  + + +TGK + +A  GEI    + I +   E  +       +   S     
Sbjct: 72  EARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL-- 128

Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
             V   PLGVVGAI  WN+P       +  A+ +GN +V+K SE    S      +   A
Sbjct: 129 --VRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA 186

Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
               G P  +++V+TG  AE G+ALV+   VD I F GS  VGR I   A+  L PVTLE
Sbjct: 187 ----GLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLE 242

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV +D D+      AV  A  ++GQ C  A R  VH  +Y  FV ++     S
Sbjct: 243 LGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAAS 302

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
           +  G PL    D+G L   E  ++++  + DA+ +GA +LA G            +  PT
Sbjct: 303 LKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG------GYFVEPT 356

Query: 419 VIVNVNHTMKLMQEEI 434
           ++  V   M++ +EEI
Sbjct: 357 ILEGVTPDMRIAREEI 372

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  256 bits (656), Expect = 7e-82
 Identities = 95/275 (34%), Positives = 137/275 (49%), Gaps = 11/275 (4%)

Query: 95  ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
           AR A K WA     +R   LR +   + E +E +  + + +TGK +   +LGE+    + 
Sbjct: 3   ARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE-EALGEVARAIDT 61

Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 214
             +     +K   PE  S        +A V   PLGVVG I  WN+P       +  A+ 
Sbjct: 62  FRYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118

Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDK 271
           +GN +V+K SE    +      ++Q A    G P  +V+V+ G   E G AL+S   VDK
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEA----GLPPGVVNVVPGGGDEVGAALLSHPRVDK 174

Query: 272 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQN 331
           I F GS  VG+ IM+ A++ L PVTLELGGK   IV +D D+    + AV  A  ++GQ 
Sbjct: 175 ISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQI 234

Query: 332 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
           C  A R  VH  IY  FV ++  ++  V    P+A
Sbjct: 235 CTAASRLLVHESIYDEFVEKLVTVLVDVDPDMPIA 269

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  244 bits (626), Expect = 2e-76
 Identities = 112/369 (30%), Positives = 171/369 (46%), Gaps = 19/369 (5%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P     +   P  S   V   + +AR AQK W     ++R+  +   ++ +  + + I E
Sbjct: 3   PIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAE 62

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK----PEYRSSGRSMIHKKAKVEF 186
             +   G+  +  + GEI    E+  +++S  E+ L     PE     R +  +      
Sbjct: 63  ELTWQMGRP-IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE------ 115

Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
            PLGVV  I  WNYP+    N ++ A+ +GN +++K S      G        AA A  G
Sbjct: 116 -PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGER----FAAAFAEAG 170

Query: 247 APENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
            PE +  V+    ET  AL++   +D + F GS   GR I R A+     V LELGGKD 
Sbjct: 171 LPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDP 230

Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
             V  D D+   A+  V  A  +SGQ+C   ER YVH  IY  FV     +VK    G P
Sbjct: 231 AYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290

Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
           L     +G +     ++ ++  + DA+ KGA  L  G+     +     Y  PTV+ NV+
Sbjct: 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGG-AYLAPTVLTNVD 349

Query: 425 HTMKLMQEE 433
           H+M++M+EE
Sbjct: 350 HSMRVMREE 358

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  243 bits (622), Expect = 1e-75
 Identities = 126/374 (33%), Positives = 181/374 (48%), Gaps = 29/374 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + +G  P    A+ D  +  A  A K W K++ ++R   LR     I E  E +  
Sbjct: 4   PATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLAR 63

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           + + + GK + +A  GE+      + W   E         R  GR        K+  V  
Sbjct: 64  LLTLEQGKPLAEA-RGEVDYAASFLEWFAEEAR-------RIYGRTIPSPAPGKRILVIK 115

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GVV AI  WN+P   I     P LAA   G  +V+K +E    S      + + A  
Sbjct: 116 QPVGVVAAITPWNFPAAMITRKIAPALAA---GCTVVLKPAEETPLSALALAELAEEA-- 170

Query: 244 AVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
             G P  +++V+TG  AE GEAL +S  V KI F GS  VG+++M  A+ T+  V+LELG
Sbjct: 171 --GLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELG 228

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           G   FIV DD D+      A+ +  +++GQ C  A R YVH  IY  FV ++ + VK + 
Sbjct: 229 GNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
            G  L    DMG L      EK++ LV DA+ KGA++L  G       G    ++ PTV+
Sbjct: 289 VGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGK-RLGLGGY---FYEPTVL 344

Query: 421 VNVNHTMKLMQEEI 434
            +V   M +M EE 
Sbjct: 345 TDVTDDMLIMNEET 358

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  235 bits (602), Expect = 1e-72
 Identities = 126/395 (31%), Positives = 194/395 (49%), Gaps = 32/395 (8%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           YI        S   +    PAT + +   PA +  + D  V  A  AQK W +    +R 
Sbjct: 1   YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60

Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWL 166
            +LR L   I E+ + + ++   + GKT+  A   E+  T + I ++       EGE  +
Sbjct: 61  AYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGE--I 117

Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
            P  R +    I K       P+GVV  I+ WN+PF  I   +  A+ +GN IVIK SE 
Sbjct: 118 IPSDRPNENIFIFKV------PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEE 171

Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRM 283
              +   +  ++  A    G P  +++++TG  +  G+ALV+   V  I   GS   G+ 
Sbjct: 172 TPLNALEFAELVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQK 227

Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFY 339
           IM  A++ +T V+LELGGK   IV  D D+     +AV+A + S     GQ C  AER Y
Sbjct: 228 IMEAAAENITKVSLELGGKAPAIVMKDADL----DLAVKAIVDSRIINCGQVCTCAERVY 283

Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
           VH DIY  F+ ++ + +K+V  G P     DMG L      +K++ +V  A++ GA +L 
Sbjct: 284 VHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLT 343

Query: 400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            G      +G    ++ PTV+ NV   M+++QEEI
Sbjct: 344 GGKRPEGEKG---YFYEPTVLTNVRQDMEIVQEEI 375

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  231 bits (592), Expect = 2e-71
 Identities = 115/375 (30%), Positives = 176/375 (46%), Gaps = 38/375 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT +     P  S A++D+ VA A+ A   W+ +  ++RR  L  +   I  + E +  
Sbjct: 4   PATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELAR 63

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + + + GK + +A   E+      + WL       L  E          ++ ++   PLG
Sbjct: 64  LLTLEQGKPLAEAQ-FEVGGA---VAWLRYTASLDLPDEVIEDDD---TRRVELRRKPLG 116

Query: 191 VVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
           VV AIV WN+P       +LA      A+ +GN +V+K S            + Q  L  
Sbjct: 117 VVAAIVPWNFPL------LLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-- 168

Query: 245 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
              P  +++V++G  E G AL S   + KI F GS   G+ +M +A+KTL  VTLELGG 
Sbjct: 169 ---PPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGN 225

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
           DA IV  DVD+  VA      A  +SGQ CA  +R YVH  IY  F   +  + K+   G
Sbjct: 226 DAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVG 285

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAVDQYFPPT 418
             L     +G +      +K++ LV DA  KGA++LA G      G+        + PPT
Sbjct: 286 DGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY--------FIPPT 337

Query: 419 VIVNVNHTMKLMQEE 433
           ++ +     +++ EE
Sbjct: 338 IVDDPPEGSRIVDEE 352

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  229 bits (587), Expect = 1e-70
 Identities = 113/366 (30%), Positives = 178/366 (48%), Gaps = 12/366 (3%)

Query: 70  EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
            P T + LG  P  + A+V+   A+AR AQ+ WA   F +R          ++E ++ + 
Sbjct: 2   APFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELL 61

Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 189
           ++   +TGK    A   E++       +     E+ LKP  R     ++  +  V   P 
Sbjct: 62  DLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVL-TRTTVNRRPK 119

Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
           GVVG I  WNYP     +  + A+ +GN +V+K     + +  +   ++  A    G P 
Sbjct: 120 GVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA----GLPR 175

Query: 250 NLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308
           +L  V+TG  +E G A+V + D ++F GS   GR++   A + L   +LELGGK+  IV 
Sbjct: 176 DLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVL 235

Query: 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368
           +D D+   A  AVRA   ++GQ C   ER YVH  +Y  FV +     +++  G  L   
Sbjct: 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYG 295

Query: 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTM 427
            DMG+L      +++   V+DA+ KGA +LA G     +   +  YF  PTV+  V   M
Sbjct: 296 PDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR----ARPDLGPYFYEPTVLTGVTEDM 351

Query: 428 KLMQEE 433
           +L  EE
Sbjct: 352 ELFAEE 357

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  227 bits (580), Expect = 1e-69
 Identities = 129/389 (33%), Positives = 180/389 (46%), Gaps = 53/389 (13%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           PAT +     P  S A+VD  VA AR A     W K +  +R + LR L   I  + E +
Sbjct: 4   PATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEEL 63

Query: 129 CEISSRDTGKTM--VDASLGEIMTT-------CEKI--TWLLSEGEKWLKPEYRSSGRSM 177
            E+ +RD GK +    A +  +           +KI    +  +     K +Y +  R  
Sbjct: 64  AELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVD-----KGDYLNFTRRE 118

Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN------PMLAAVFSGNGIVIKVSENASWSG 231
                     PLGVV AI  WN P   +        P LAA   GN +V+K SE+   S 
Sbjct: 119 ----------PLGVVAAITPWNSP---LLLLAKKLAPALAA---GNTVVLKPSEHTPAST 162

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
               ++ + A    G P  +V+V+TGF  ETGEALV    V KI F G    GR I R A
Sbjct: 163 LELAKLAEEA----GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218

Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
           ++ L PVTLELGGK   IV DD D+       V     ++GQ C    R  V R IY  F
Sbjct: 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEF 278

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGH 405
           V ++    +++  G PL  +  MG L      EK++  V  A ++GA +L    R S   
Sbjct: 279 VERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGAD 338

Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           L  G    +F PT++ +V + M++ QEE+
Sbjct: 339 LGAG---YFFEPTILADVTNDMRIAQEEV 364

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  220 bits (562), Expect = 6e-67
 Identities = 122/383 (31%), Positives = 174/383 (45%), Gaps = 39/383 (10%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           + PAT + L   P    AEVD  VA A++A   W++ S  +R + L  +   I    + +
Sbjct: 2   FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADEL 61

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKI-----TWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
             + S DTGK +  A   +I              L  +GE      Y   G ++ +    
Sbjct: 62  ALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGE-----SYPQDGGALNY---- 112

Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRI 237
           V   P+GV G I  WN P       ML       A+  GN +V+K SE    +      +
Sbjct: 113 VLRQPVGVAGLITPWNLPL------MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL 166

Query: 238 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
              A    G P  +V+V+ GF  E G ALV+   VD I F G    GR IMR A+  L P
Sbjct: 167 ANEA----GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP 222

Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
           V+LELGGK+  IV  D D+      AVR++  ++G+ C    R  V R IY  F+ +  +
Sbjct: 223 VSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVE 282

Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS---FGHLSEGAV 411
             K++  G PL    ++G L   EH EK+   V  A  +GA IL  G       L  G  
Sbjct: 283 RAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY- 341

Query: 412 DQYFPPTVIVNVNHTMKLMQEEI 434
             +  PTVI  +++  ++ QEEI
Sbjct: 342 --FVEPTVITGLDNDSRVAQEEI 362

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  213 bits (546), Expect = 1e-64
 Identities = 113/333 (33%), Positives = 170/333 (51%), Gaps = 15/333 (4%)

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTG-KTMVDASLGEIMTTCEKITWLLSEGEK 164
           S ++RR  L  L   ++++Q+ + E  S D G ++  +  L EI+ +   I       +K
Sbjct: 18  SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77

Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
           W+KP  R  G   +  KA+VE+ PLGVVG IV WNYP +    P++AA+ +GN ++IK S
Sbjct: 78  WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137

Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV--DKIIFVGSPGVGR 282
           E    +      ++          E+ V V+TG A+   A  SS+  D ++F GS  VGR
Sbjct: 138 EFTPRTSALLAELLAEYF-----DEDEVAVVTGGADVAAA-FSSLPFDHLLFTGSTAVGR 191

Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
            +MR A++ LTPVTLELGGK   I+  D D+   A+      L ++GQ C   +   V  
Sbjct: 192 HVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPE 251

Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
           D    FV+     V  +   P LA   D  ++    H  +LQ L+ DA  KGA ++    
Sbjct: 252 DKLEEFVAAAKAAVAKMY--PTLADNPDYTSIINERHYARLQGLLEDARAKGARVI---E 306

Query: 403 FGHLSEGAVD-QYFPPTVIVNVNHTMKLMQEEI 434
                E     +  PPT+++NV   M++MQEEI
Sbjct: 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEI 339

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  214 bits (547), Expect = 5e-64
 Identities = 120/389 (30%), Positives = 181/389 (46%), Gaps = 36/389 (9%)

Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
              +    +   P T + L   P  + A+V+   A+AR AQ+ WA +  ++R     +LL
Sbjct: 27  DGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRER---AAVLL 83

Query: 119 KY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
           ++   ++E++E + ++   +TGK    A   E++       +      K L P  R+   
Sbjct: 84  RFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGAL 142

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
            ++  K      P GVVG I  WNYP     +  + A+ +GN +V+K       +     
Sbjct: 143 PVL-TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT----- 196

Query: 236 RIIQAALAAV------GAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNA 288
                ALAAV      G P +L  V+TG     G ALV + D ++F GS   GR++   A
Sbjct: 197 -----ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQA 251

Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
            + L   +LELGGK+  IV DD D+   A  AVRA   ++GQ C   ER YVH  IY  F
Sbjct: 252 GRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF 311

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL----ARGSFG 404
           V      V+++  G       DMG+L      E +   V+DA+ KGA +L    AR   G
Sbjct: 312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371

Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
            L       ++ PTV+  V   M+L +EE
Sbjct: 372 PL-------FYEPTVLTGVTPDMELAREE 393

Length = 524

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  209 bits (535), Expect = 6e-63
 Identities = 111/375 (29%), Positives = 173/375 (46%), Gaps = 23/375 (6%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQELIC 129
           PAT + +G  P    A+VD  +A AR+A      S   ++R + LR L + +   +E + 
Sbjct: 4   PATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELR 63

Query: 130 EISSRDTGKTM-------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
            +   + G  +       VD  +G +    +       E +  +       GR ++ ++ 
Sbjct: 64  ALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRRE- 122

Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
                P+GVV AI  WN+PF      +  A+ +GN +V+K + +   S      II    
Sbjct: 123 -----PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII---- 173

Query: 243 AAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
           A    P  +V+V+TG     GEAL +   VD + F GS  VGR IM  A+ TL  V LEL
Sbjct: 174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLEL 233

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK A IV DD D+   A  AV   + ++GQ CA   R  V R  Y   V  +A   +++
Sbjct: 234 GGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEAL 293

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G P      MG L      ++++  +    D+GA ++  G  G  +      Y  PT+
Sbjct: 294 PVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG--GRPAGLDKGFYVEPTL 351

Query: 420 IVNVNHTMKLMQEEI 434
             +V++ M++ QEEI
Sbjct: 352 FADVDNDMRIAQEEI 366

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  208 bits (531), Expect = 2e-62
 Identities = 116/383 (30%), Positives = 182/383 (47%), Gaps = 41/383 (10%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
           ++P+T +          A+VD  V  AR+A +  W + S  +R + L  + + I EH + 
Sbjct: 2   FDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADE 61

Query: 128 ICEISSRDTGKTMVDASLGEIM----------TTCEKITWLLSEGEKW-LKPEYRSSGRS 176
           +  + S DTGK +  A   ++              +K+      GE   L P Y      
Sbjct: 62  LARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKL-----HGETIPLGPGYFVY--- 112

Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
                      P GV G I+ WNYP       +  A+ +GN +V+K +E+A  +     R
Sbjct: 113 -------TVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL---R 162

Query: 237 IIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           + + A  A G P   ++V+TG  AE G ALV+   VD I F GS   G  +MR A++ + 
Sbjct: 163 LAELAEEA-GLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVV 221

Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
           PVTLELGGK   IV  D D+     + V A +Q++GQ C+   R  VHR IY   + ++ 
Sbjct: 222 PVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLV 281

Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAV 411
           +  +++  GP L    D+G L   +  ++++  V  A  +GA I+A G    G  + G  
Sbjct: 282 ERFRALRVGPGLEDP-DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY- 339

Query: 412 DQYFPPTVIVNVNHTMKLMQEEI 434
             +  PT++ +V    +L QEEI
Sbjct: 340 --FVAPTLLDDVPPDSRLAQEEI 360

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  205 bits (524), Expect = 2e-61
 Identities = 111/381 (29%), Positives = 169/381 (44%), Gaps = 36/381 (9%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
            EPAT + L         +VD  V  A+ AQK W+ +S  +R + LR     + E  + I
Sbjct: 2   IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK------- 181
             + + D GK + +A + +I ++ + +             EY +     +  +       
Sbjct: 62  ARLETIDNGKPIEEARV-DIDSSADCL-------------EYYAGLAPTLSGEHVPLPGG 107

Query: 182 --AKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
             A     PLGV   I +WNYP         P LA    GN +V K S     +      
Sbjct: 108 SFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALAC---GNAMVYKPSPFTPLTALLLAE 164

Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 294
           I+  A    G P+ + +V+ G  ETG+ L     V K+ F GS   G+ +M  A+K +  
Sbjct: 165 ILTEA----GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKH 220

Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
           VTLELGGK   I+ DD D+ +    A+ A   S GQ C+   R +V R I   F  ++ +
Sbjct: 221 VTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVE 280

Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-Q 413
             K +  G PL     MGAL   EH EK+   +  A  +GA++L  G      +G  +  
Sbjct: 281 RTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGF 340

Query: 414 YFPPTVIVNVNHTMKLMQEEI 434
           Y  P V+ +    M +++EEI
Sbjct: 341 YVSPCVLTDCTDDMTIVREEI 361

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  204 bits (521), Expect = 4e-61
 Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 90  ERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
            RV  A++A       S+  +R   L+ L K I+  +E I    + D  K   +  L EI
Sbjct: 1   RRVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEI 60

Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
           +    +I   +   +KW+KP+   +   +   K+K+ + P GV   I  WNYPF+  F P
Sbjct: 61  LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120

Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
           +++A+ +GN  ++K SE    +     +II+ A       E+ V V  G AE  +AL+  
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREAF-----DEDEVAVFEGDAEVAQALLEL 175

Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
             D I F GSP VG+++M  A+K L  VTLELGGK   IV +  D+   A+        +
Sbjct: 176 PFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235

Query: 328 SGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
           +GQ C   +  +VH  +   FV  + A+I K            D+  +    H ++L+ L
Sbjct: 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGL 295

Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++DA+ KGA++   G F      A  +Y  PTV+ NV   MK+MQEEI
Sbjct: 296 LDDAVAKGAKVEFGGQF-----DAAQRYIAPTVLTNVTPDMKIMQEEI 338

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  203 bits (520), Expect = 5e-61
 Identities = 105/363 (28%), Positives = 167/363 (46%), Gaps = 43/363 (11%)

Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
           ++  + +A  A   W K+SF +R   LR L   + E ++ +  + + + GK + +A   E
Sbjct: 1   IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAE 59

Query: 148 IMTTCEKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
           +    EK  W+        E +L  E   +       KA V + PLGVV  I+ WN+PF 
Sbjct: 60  V----EKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFW 111

Query: 204 NIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 260
            +F    P L A   GN +++K + N           I+      G PE +   +    +
Sbjct: 112 QVFRFAAPNLMA---GNTVLLKHASNVPGCA----LAIEELFREAGFPEGVFQNL--LID 162

Query: 261 TGEALVSSVDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311
           + +     V+ II           GS   GR +   A K L    LELGG D FIV DD 
Sbjct: 163 SDQ-----VEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA 217

Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
           D+    + AV+  LQ++GQ+C  A+RF VH D+Y  F+ +  + + ++  G P+    D+
Sbjct: 218 DLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDL 277

Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
           G L   +  ++L   V +A+  GA +L  G       GA   ++PPTV+ +V   M    
Sbjct: 278 GPLARKDLRDELHEQVEEAVAAGATLLLGGKR-PDGPGA---FYPPTVLTDVTPGMPAYD 333

Query: 432 EEI 434
           EE+
Sbjct: 334 EEL 336

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  203 bits (518), Expect = 2e-60
 Identities = 116/378 (30%), Positives = 173/378 (45%), Gaps = 23/378 (6%)

Query: 67  QCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
               PAT + L    A   A+VD  VA AR+A    VW++ S  +R+  L  L   I  H
Sbjct: 5   ATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAH 64

Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
           ++ +  + + D GK + DA   ++ +      W     +K +  E   +G   +   A +
Sbjct: 65  RDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDK-VYGEVAPTGPDAL---ALI 120

Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
              PLGVVGA+V WN+P         P LAA   GN +V+K +E +  +     R+ + A
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAA---GNSVVLKPAEQSPLTA---LRLAELA 174

Query: 242 LAAVGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
           L A G P  +++V+ GF  T GEAL     VD + F GS  VGR  +  + ++ L  V L
Sbjct: 175 LEA-GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233

Query: 298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
           E GGK   IV  D  D+   A+ A      + G+ C+   R  VH  I   F+ +V    
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293

Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
           +    G PL     MGAL    H +K+   +     +GA ++A G       G    +  
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG--GFFVE 351

Query: 417 PTVIVNVNHTMKLMQEEI 434
           PTV   V   M++ +EEI
Sbjct: 352 PTVFDGVTPDMRIAREEI 369

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  201 bits (512), Expect = 2e-59
 Identities = 112/393 (28%), Positives = 178/393 (45%), Gaps = 24/393 (6%)

Query: 52  YIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           YI        S        PA   + +G FP  + ++VD  V  AR+A   W K    +R
Sbjct: 2   YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61

Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
            ++L    + + + +E +  + +R+ GK + +   G++    +   +   EG + L  E 
Sbjct: 62  AEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRR-LFGET 119

Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
             S   + +K A     P+GVV  I  WN+P       +  A+  GN +V K +E+    
Sbjct: 120 VPS--ELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177

Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALV--SSVDKIIFVGSPGVGRMIMRN 287
                ++++   A  G P  +V+V+ G  E  GEALV    VD + F GS  VG  I   
Sbjct: 178 A---LKLVEL-FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233

Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRD 343
            ++    V LE+GGK+  IV DD D+     +A+  AL S+    GQ C    R  VH  
Sbjct: 234 CARPNKRVALEMGGKNPIIVMDDADL----DLALEGALWSAFGTTGQRCTATSRLIVHES 289

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           +Y  F+ +  +  K +  G  L  + DMG L      EK+ N      ++GA +L  G  
Sbjct: 290 VYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGG-- 347

Query: 404 GHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
             L+ G  ++  +  PTV  +V   M++ QEEI
Sbjct: 348 ERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEI 380

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  199 bits (509), Expect = 4e-59
 Identities = 115/367 (31%), Positives = 173/367 (47%), Gaps = 15/367 (4%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + +      S  +VD  VA AR A + W+     +R + L  L + I+ + + +  
Sbjct: 4   PATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELAR 63

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + S DTGK +  A   ++    +   +     +K         G  + +   +    P+G
Sbjct: 64  LESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE----PVG 119

Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
           VVGAIV WN+P       +  A+ +GN +V+K +E    S     RI +   A  G P  
Sbjct: 120 VVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA---LRIAELM-AEAGFPAG 175

Query: 251 LVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
           +++V+TGF E  G ALV    VDKI F GS  VGR IM+ A+  L  V+LELGGK A IV
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235

Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
             D D+    + A      + GQ C    R  VH  IY  F+ +   + +S+  G PL  
Sbjct: 236 FADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDP 295

Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
           K  MG L      +++ + V+   ++GA +L  G       GA   +  PT+   V   M
Sbjct: 296 KTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK----RPGARGFFVEPTIFAAVPPEM 351

Query: 428 KLMQEEI 434
           ++ QEEI
Sbjct: 352 RIAQEEI 358

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  199 bits (508), Expect = 8e-59
 Identities = 107/392 (27%), Positives = 169/392 (43%), Gaps = 21/392 (5%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
           ++I  R   P     +    PAT + +G  P  + A+VD  VA AR+A     W + S  
Sbjct: 1   LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60

Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
           +R   LR L   +    + +  + + + G  +  +   +       + +  +    +   
Sbjct: 61  ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120

Query: 169 EYRSS---GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
           E R     G  ++ ++      P+GVV AIV WN P       +  A+ +G  +V+K S 
Sbjct: 121 ERRPGSGGGHVLVRRE------PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSP 174

Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
                      ++  A    G P  +V+V+    E GE LV    VDK+ F GS   GR 
Sbjct: 175 ETPLDAY----LLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRR 230

Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           I     + L  VTLELGGK A IV DD D+       V A+L ++GQ C    R  V R 
Sbjct: 231 IAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRS 290

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
            Y   V  +A  V ++  G PL     +G L      E+++  +     +GA ++  G  
Sbjct: 291 RYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGR 350

Query: 404 -GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              L  G    +  PT+  +V++ M++ QEEI
Sbjct: 351 PAGLDRG---WFVEPTLFADVDNDMRIAQEEI 379

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  198 bits (505), Expect = 2e-58
 Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 26/386 (6%)

Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILL 118
                 ++   P+T + +    A    +VD+ V  ARKA +  W+K + ++R + L  L 
Sbjct: 19  SSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLA 78

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
             + ++++L+  I + D+GK     +LG++      I +     +K         G+++ 
Sbjct: 79  DLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADK-------IQGKTIP 131

Query: 179 HKKAKVEF---HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGC 232
               K+ +    P GV G I+ WNYP         P LAA   GN +VIK +EN   S  
Sbjct: 132 TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAA---GNTVVIKPAENTPLSLL 188

Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
           ++  +++ A    G P  +V++I G+ A  G AL     VDKI F GS   GR++M+ A+
Sbjct: 189 YFANLVKEA----GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244

Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
           + L  VTLE GGK   +V +D D+    + A    + +SGQNC    R YV   IY  FV
Sbjct: 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFV 304

Query: 350 SQVAKIVKSVSA-GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
            +  + VK     G P      +G        +++ + +     +GA+ L  G       
Sbjct: 305 EKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK-LVYGGEKAPEG 363

Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEI 434
                + PPT+  +V   M++++EEI
Sbjct: 364 LGKGYFIPPTIFTDVPQDMRIVKEEI 389

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  196 bits (501), Expect = 4e-58
 Identities = 110/359 (30%), Positives = 162/359 (45%), Gaps = 33/359 (9%)

Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
           +VD   A A  AQK WA +  ++R   LR   + + E ++ I +   R++G T   A+  
Sbjct: 1   DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-F 59

Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR---SMIH-KKAKVEFHPLGVVGAIVSWNYPF 202
           E+         +L E         R  G    S +  K++ V   PLGVVG I  +N+P 
Sbjct: 60  EVGAAIA----ILREAAGLP---RRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPL 112

Query: 203 H---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAALAAVGAPENLVDVITG- 257
                   P LA    GN +V+K       +G      I + A    G P+ +++V+ G 
Sbjct: 113 ILAMRSVAPALAL---GNAVVLKPDSRTPVTGGLLIAEIFEEA----GLPKGVLNVVPGG 165

Query: 258 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
            +E G+ALV    V  I F GS  VGR I   A + L  V LELGG +  IV DD D+  
Sbjct: 166 GSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDL 225

Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 375
               A   A    GQ C  A R  VH  +Y  FV ++    K++  G P      +G L 
Sbjct: 226 AVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLI 285

Query: 376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                +++  +V DA+  GA +L  G++    EG     + PTV+ +V   M + +EEI
Sbjct: 286 NERQVDRVHAIVEDAVAAGARLLTGGTY----EGLF---YQPTVLSDVTPDMPIFREEI 337

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  195 bits (497), Expect = 2e-57
 Identities = 118/380 (31%), Positives = 185/380 (48%), Gaps = 35/380 (9%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
             PA  + +   P+LSR EV E +  A KA+ V +     +R + L  + + I   +E +
Sbjct: 4   RNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEEL 63

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLS-------EGEKWLKPEYRSSGRSMIHKK 181
            ++ + + GK +   S  E+  T     + L+        GE      Y  + R +    
Sbjct: 64  AKLLTIEVGKPIKQ-SRVEVERTIR--LFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120

Query: 182 AKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
                 P+GVVGAI  +N+P     H I  P +A    GN +V+K S N   +     +I
Sbjct: 121 R----EPIGVVGAITPFNFPANLFAHKI-APAIAV---GNSVVVKPSSNTPLTAIELAKI 172

Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
           ++ A    G P  +++V+TG+    G+ +V++  V+ I F GS  VG +I   A  T   
Sbjct: 173 LEEA----GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKK 228

Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
           V LELGG D  IV  D D+     IAVR   +++GQ C   +R  V  ++Y  F+  + +
Sbjct: 229 VALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVE 288

Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
            VK +  G PL    D+G L   E  E+++NLVNDA++KG +IL  G      +     +
Sbjct: 289 KVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG------KRDEGSF 342

Query: 415 FPPTVIVNVNHTMKLMQEEI 434
           FPPTV+ N    M +M+EE+
Sbjct: 343 FPPTVLENDTPDMIVMKEEV 362

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  194 bits (495), Expect = 3e-57
 Identities = 113/381 (29%), Positives = 169/381 (44%), Gaps = 40/381 (10%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
            +PAT + +   P  S A+VD  VA A  A   W +++  +R + L  L   I E+ E +
Sbjct: 2   VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
             + SR+TGK +      E+    +   +           + GE      Y     SMI 
Sbjct: 62  AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGE------YLPGHTSMIR 115

Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
           ++      P+GVV  I  WNYP         P LAA   GN +V+K SE    +      
Sbjct: 116 RE------PIGVVAQIAPWNYPLMMAAWKIAPALAA---GNTVVLKPSETTPLTT----- 161

Query: 237 IIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293
           ++ A LAA   P  +V+V+ G     G+ALV+   V  +   GS   G+ + R A+ TL 
Sbjct: 162 LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLK 221

Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
            V LELGGK   IV DD D+         A   ++GQ+C  A R YVH  +Y  FV+ + 
Sbjct: 222 RVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALV 281

Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
           + V ++  G P     +MG L      E++   V +     A +L  G            
Sbjct: 282 EAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGR----RAEGPGY 336

Query: 414 YFPPTVIVNVNHTMKLMQEEI 434
           ++ PTV+  V    +++QEEI
Sbjct: 337 FYEPTVVAGVAQDDEIVQEEI 357

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  195 bits (498), Expect = 4e-57
 Identities = 116/380 (30%), Positives = 188/380 (49%), Gaps = 33/380 (8%)

Query: 67  QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126
             Y PAT + +   P + RAE ++ +A A  A   W+K +  +R + LR     II ++E
Sbjct: 43  PVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKE 102

Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAK 183
            + ++ + + GK + +A +GE+      + +   E ++    + P      R ++ K+  
Sbjct: 103 DLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQ-- 159

Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
               P+GVVGAI  WN+P   I   +  A+ +G  +V+K SE    +          ALA
Sbjct: 160 ----PVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLT----------ALA 205

Query: 244 A------VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
           A       G P  +++V+ G A E G+AL++S  V KI F GS  VG+ +M  A+ T+  
Sbjct: 206 AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKR 265

Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
           V+LELGG   FIV DD D+    + A+ +  ++SGQ C  A R  V   IY  F    +K
Sbjct: 266 VSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSK 325

Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 414
            V+ +  G         G L      +K+++ V DA+ KGA++L  G     S G    +
Sbjct: 326 AVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--RHSLGGT--F 381

Query: 415 FPPTVIVNVNHTMKLMQEEI 434
           + PTV+ +V   M + +EE+
Sbjct: 382 YEPTVLGDVTEDMLIFREEV 401

Length = 498

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  194 bits (495), Expect = 4e-57
 Identities = 118/382 (30%), Positives = 179/382 (46%), Gaps = 38/382 (9%)

Query: 70  EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
            PAT + +G  P    A+VD  VA A+ A   WA +  ++R + L  +   +    E + 
Sbjct: 3   NPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELA 62

Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
            + + +TG  +   +  E     +   +   L  E    LK E    G  ++    +   
Sbjct: 63  RLLALETGNALRTQARPEAAVLADLFRYFGGLAGE----LKGETLPFGPDVLTYTVRE-- 116

Query: 187 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
            PLGVVGAI+ WN P       +  A+ +GN +V+K +E+A  +      I+   L    
Sbjct: 117 -PLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVL---- 171

Query: 247 APENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 303
            P  +++VITG+  E G ALV    VDK+ F GS  VG++I R A+  L PV+LELGGK 
Sbjct: 172 -PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS 230

Query: 304 AFIVCDDVDVPHVAQIAV---RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
             IV  D D+      A+   R   Q  GQ+C    R +VH DIY  F+ ++   +  + 
Sbjct: 231 PMIVFPDADLDDAVDGAIAGMRFTRQ--GQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLK 288

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-----KGAEILARGSF---GHLSEGAVD 412
            G PL    D+GA+     SEK    V   +D      GA +L  G     G L++G   
Sbjct: 289 IGDPLDEATDIGAII----SEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGF-- 342

Query: 413 QYFPPTVIVNVNHTMKLMQEEI 434
            +  PT+   V++  +L +EEI
Sbjct: 343 -FVQPTIFSGVDNEWRLAREEI 363

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  194 bits (494), Expect = 5e-57
 Identities = 115/371 (30%), Positives = 175/371 (47%), Gaps = 20/371 (5%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + L   PA S A+VD  VA AR A   W  ++  +R + LR L   + EH E +  
Sbjct: 4   PATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELAL 63

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITW---LLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           I + D G  +  A LG++M     + +   L++E    LK E    G   +H   +    
Sbjct: 64  IDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTE----LKGETIPVGGRNLHYTLR---E 115

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P GVV  IV++N+P       + A + +GN +V+K  E A  S      + +  L     
Sbjct: 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVL----- 170

Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
           P  + +++ G  A  G ALV    V +I  +GS   GR IMR A++ +  VTLELGGK+A
Sbjct: 171 PPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230

Query: 305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
            IV  D D    A  AV        GQ+C    R +VH  IY   +++V + V ++  G 
Sbjct: 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290

Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 423
           P      MG L   +  +++ + ++ A  +GA ++  G            Y  PTV  +V
Sbjct: 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350

Query: 424 NHTMKLMQEEI 434
              M++ +EEI
Sbjct: 351 TPGMRIAREEI 361

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  193 bits (492), Expect = 2e-56
 Identities = 113/397 (28%), Positives = 169/397 (42%), Gaps = 52/397 (13%)

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILL 118
            S        PAT + +         +VD  V  AR A +   W K   ++R + L  L 
Sbjct: 16  VSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLA 75

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
             I   ++ +  + S D GK + +++ G++  +           +KI             
Sbjct: 76  DLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ------------ 123

Query: 169 EYRSSGRSMIHKKAKVEF---HPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIK 222
                G+++      + +    P+GV G I+ WN+P         P LAA   GN +V+K
Sbjct: 124 -----GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAA---GNTVVLK 175

Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
            +E    S  +   +I+ A    G P  +V+++ GF  T G A+ S   VDKI F GS  
Sbjct: 176 PAEQTPLSALYLAELIKEA----GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTA 231

Query: 280 VGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
           VGR IM  A+K+ L  VTLELGGK   IV DD D+    + A      + GQ C    R 
Sbjct: 232 VGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRI 291

Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
           +V   IY  FV +     +    G P       G        +K+ + +     +GA +L
Sbjct: 292 FVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLL 351

Query: 399 ARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
             G   H S+G    YF  PTV  +V   MK+ +EEI
Sbjct: 352 TGGE-RHGSKG----YFIQPTVFTDVKDDMKIAKEEI 383

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  192 bits (491), Expect = 2e-56
 Identities = 116/398 (29%), Positives = 174/398 (43%), Gaps = 31/398 (7%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           +I      P        Y P   K L   P  +  +VD  V  A +A K W K+S  +R 
Sbjct: 4   FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63

Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPE 169
             L  +   I E+ EL+    + D GK + +    +I    +   +       +      
Sbjct: 64  NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQ------ 117

Query: 170 YRSSGRSMIHKKA-KVEFH-PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
                 S I +      FH PLGVVG I+ WN+P         P LAA   GN +V+K +
Sbjct: 118 --EGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAA---GNTVVLKPA 172

Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVG 281
                S      +I   L     P+ +V+V+TGF +E G+ L S   + K+ F GS  VG
Sbjct: 173 SQTPLSILVLMELIGDLL-----PKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVG 227

Query: 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAE 336
           R+IM+ A++ L PVTLELGGK   I  DD           A+        + G+ C    
Sbjct: 228 RLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPS 287

Query: 337 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 396
           R  V   IY  F+ +  +  +++  G PL  +  MGA    +  EK+ + V+   ++GAE
Sbjct: 288 RALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAE 347

Query: 397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +L  G    L       ++ PT+I   N+ M++ QEEI
Sbjct: 348 VLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEI 385

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  188 bits (479), Expect = 4e-55
 Identities = 106/347 (30%), Positives = 161/347 (46%), Gaps = 17/347 (4%)

Query: 89  DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 148
            E VA+ R+        S + R+  L+ L + + E++E I      D GK   +A L EI
Sbjct: 1   AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60

Query: 149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208
                +I   L   +KW+KP   S    +   KA V   PLGVV  I  WNYP      P
Sbjct: 61  AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120

Query: 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 267
           ++ A+ +GN +V+K SE A  +     ++I             V V+ G  E   AL++ 
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGVEVATALLAE 175

Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
             D I F GSP VG+++M  A+K LTPVTLELGGK   IV  D ++   A+        +
Sbjct: 176 PFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235

Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           +GQ C   +   VH  I    + ++ K +K      P     D G +    H ++L +L+
Sbjct: 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESP-DYGRIINERHFDRLASLL 294

Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +D      +++  G          ++Y  PT++ +V+    LMQEEI
Sbjct: 295 DD-----GKVVIGGQV-----DKEERYIAPTILDDVSPDSPLMQEEI 331

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  188 bits (481), Expect = 6e-55
 Identities = 103/397 (25%), Positives = 170/397 (42%), Gaps = 36/397 (9%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
            YI      P     +    PAT + +G  P  + A+VD  VA AR+A   W+ +S ++R
Sbjct: 1   FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60

Query: 111 RQFLRILLKYIIEHQELICEISSRDTG-------KTMVDASLGEIMTTCEKITWLLSEGE 163
              L  + +      + + +  + + G          V   +G +    +       +  
Sbjct: 61  AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAAD-----ALKDF 115

Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
           ++ +      G S++ ++      P+GV G I  WN+P + I   +  A+ +G  +V+K 
Sbjct: 116 EFEERR----GNSLVVRE------PIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKP 165

Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGV 280
           SE A  S      I+   L   G P  + +++ G     GEAL +   VD + F GS   
Sbjct: 166 SEVAPLSA----IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRA 221

Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
           G+ +   A+ T+  V LELGGK A I+ DD D+       V A   +SGQ+C    R  V
Sbjct: 222 GKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLV 281

Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
            R  YA      A   ++   G P      +G L      +++Q  +   +++GA ++A 
Sbjct: 282 PRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAG 341

Query: 401 GSFGH---LSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G  G    L  G    +  PTV  +V   M + +EEI
Sbjct: 342 GP-GRPEGLERGY---FVKPTVFADVTPDMTIAREEI 374

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  189 bits (481), Expect = 8e-55
 Identities = 111/398 (27%), Positives = 174/398 (43%), Gaps = 34/398 (8%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQ 109
           YI        S        PA  + +   P  +  +    +A AR+A     W     ++
Sbjct: 1   YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60

Query: 110 RRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS--LGEIMTTCEKITWLLSE--GEKW 165
           R   L  +   I E  E +  + + +TGKT+ ++   + ++         L ++  GE +
Sbjct: 61  RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120

Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIK 222
             P          H  ++    P+GV G I  WNYP         P LAA   GN +VIK
Sbjct: 121 DVPP---------HVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAA---GNTVVIK 168

Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPG 279
            SE    +    F +I       G P  +V+++TG   T G  L  S  VD + F G   
Sbjct: 169 PSEVTPLTTIALFELI----EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTA 224

Query: 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 339
            GR IMR A+  +  V LELGGK+  IV  D D       A+     ++GQ C+   R  
Sbjct: 225 TGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL 284

Query: 340 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA 399
           V   I+  FV+ +A+  K +  G  L    +MG L   EH EK+ + +    ++GA ++ 
Sbjct: 285 VEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVC 344

Query: 400 ---RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              R +   L++G    +  PT+  +V+ TM+++QEEI
Sbjct: 345 GGKRPTGDELAKGY---FVEPTIFDDVDRTMRIVQEEI 379

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  187 bits (476), Expect = 3e-54
 Identities = 121/379 (31%), Positives = 192/379 (50%), Gaps = 26/379 (6%)

Query: 66  VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
           +  Y PA  + L      + A+VD  V  A++A K W K++  +R   L  +   I E++
Sbjct: 18  IDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENK 77

Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--EGEKWLKPEYRSSGRSMIHKKAK 183
           EL+  + + D GK + +    +I    +   +       E+           S++ ++  
Sbjct: 78  ELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLRE-- 135

Query: 184 VEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
               P+GVVG I+ WN+PF        P LAA   GN +VIK S   S S     +IIQ 
Sbjct: 136 ----PIGVVGQIIPWNFPFLMAAWKLAPALAA---GNTVVIKPSSTTSLSLLELAKIIQD 188

Query: 241 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
            L     P+ +V+++TG  +++GE L++   +DK+ F GS  VGR +   A+K L P TL
Sbjct: 189 VL-----PKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATL 243

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGGK A I+ DD +     + A    L + GQ C    R +V   IY  FV+++ +  +
Sbjct: 244 ELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303

Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YF 415
           +V  G PL     MGA    +  +K+ + V+ A ++GA+IL  G    L+E  +D+  + 
Sbjct: 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG--HRLTENGLDKGFFI 361

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PT+IVNV + M++ QEEI
Sbjct: 362 EPTLIVNVTNDMRVAQEEI 380

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  186 bits (475), Expect = 5e-54
 Identities = 106/405 (26%), Positives = 173/405 (42%), Gaps = 51/405 (12%)

Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
                       PA  + +      S  +V+  VA AR+A K W K    +R + +R + 
Sbjct: 8   VGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIG 67

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGR 175
           + + + +E +  + S + GK + +  LGE+   +  C+    L                R
Sbjct: 68  EALRKKKEALGRLVSLEMGKILPEG-LGEVQEMIDICDYAVGL---------------SR 111

Query: 176 SM----IH-----KKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVS 224
            +    I       +   +++PLGVVG I ++N+P   +   N  +A V  GN +V K S
Sbjct: 112 MLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPV-AVPGWNAAIALV-CGNTVVWKPS 169

Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGR 282
           E    +     +I+   L   G P  +V+++TG  + GE LV    V  + F GS  VGR
Sbjct: 170 ETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGR 229

Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERF 338
            +    ++    V LELGG +A IV DD D+     +AVRA L ++    GQ C    R 
Sbjct: 230 RVGETVARRFGRVLLELGGNNAIIVMDDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 285

Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
            VH  +Y  F+ ++ K  K V  G PL     +G L     ++       +A++      
Sbjct: 286 IVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPL----INQAAVEKYLNAIEIAKSQG 341

Query: 399 ARGSFG-HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI---ILWV 438
                G    +G     +  PT++  V    +++QEE    IL+V
Sbjct: 342 GTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYV 386

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  186 bits (475), Expect = 5e-54
 Identities = 108/372 (29%), Positives = 167/372 (44%), Gaps = 22/372 (5%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAK-SSFKQRRQFLRILLKYIIEHQEL 127
           Y P   + +G  PALS  E+ E    A  A + W      ++R   L      + E++E 
Sbjct: 21  YSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH---KKAKV 184
           +  +   + GKT+ DA L E+  T + I   + E ++ L  +    G        K A+V
Sbjct: 81  VANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKR-LDGDS-LPGDWFPGTKGKIAQV 137

Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
              PLGVV AI  +NYP +   + ++ A+  GN +V K +      G         A   
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAE----AFHD 193

Query: 245 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
            G P+ +V+V+TG   E G+ LV+   +D I F GS  VG  + +        + LELGG
Sbjct: 194 AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--RLVLELGG 251

Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
           KD  IV  D D+   A+  V+ AL  SGQ C   +R  VH  +    V  + + V  +  
Sbjct: 252 KDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKV 311

Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
           G P     D+  L   + ++ ++ L++DA+ KGA +L  G               PT++ 
Sbjct: 312 GMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGG------GREGGNLIYPTLLD 365

Query: 422 NVNHTMKLMQEE 433
            V   M+L  EE
Sbjct: 366 PVTPDMRLAWEE 377

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  184 bits (470), Expect = 2e-53
 Identities = 116/378 (30%), Positives = 184/378 (48%), Gaps = 32/378 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT   +G  PA +  +VD  V  AR+A   W K++  +R ++LR + + + E +E + E
Sbjct: 4   PATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAE 63

Query: 131 ISSRDTGKTMVDAS--LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK----KAKV 184
           + +RD GK + +A+  + ++    E     L+E           + R++       KA+V
Sbjct: 64  LEARDNGKPLDEAAWDVDDVAGCFEYYA-DLAEQLD------AKAERAVPLPSEDFKARV 116

Query: 185 EFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
              P+GVVG I  WN+P         P LAA   G  +V+K SE  S +      I    
Sbjct: 117 RREPVGVVGLITPWNFPLLMAAWKVAPALAA---GCTVVLKPSELTSLTELELAEIA--- 170

Query: 242 LAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
            A  G P  +++V+TG   E G  L +   +DKI F GS   G  +M+ A++ + PV+LE
Sbjct: 171 -AEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLE 229

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV DD D+    + A+     ++GQ C+   R  VH  I   F+ ++A   ++
Sbjct: 230 LGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEA 289

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF-P 416
           +  G PL     +G L      EK+ + +    ++GA +L  G    HL +G    YF  
Sbjct: 290 IRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKG----YFIA 345

Query: 417 PTVIVNVNHTMKLMQEEI 434
           PTV  +V    ++ +EEI
Sbjct: 346 PTVFADVPTDSRIWREEI 363

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  184 bits (469), Expect = 2e-53
 Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 11/367 (2%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA  + +    A +  +V+  +A AR+AQ  WA  S  +R + LR     I E  E + +
Sbjct: 20  PANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGRILRRAADLIRERNEELAK 79

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + + DTGKT+ +  + ++ +  +   +        L  E    G       A     PLG
Sbjct: 80  LETLDTGKTLQETIVADMDSGADVFEFFAGLAPA-LNGEIIPLG---GPSFAYTIREPLG 135

Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
           V   I +WNYP       +  A+ +GN +V K SEN   +      I++ A    G P+ 
Sbjct: 136 VCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEA----GLPKG 191

Query: 251 LVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
           + +V+ G  AE G  LV+   V K+ F G    G+ IM  A+  L  VT+ELGGK   IV
Sbjct: 192 VFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMELGGKSPLIV 251

Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
            DD D+      A+     S+GQ C+   R +VH+ I   F++++ +  + +  G P   
Sbjct: 252 FDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDE 311

Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
             +MG L    H +K+ + +     +GA +   G            +  PTV  +    M
Sbjct: 312 ATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDM 371

Query: 428 KLMQEEI 434
            +++EEI
Sbjct: 372 TIVREEI 378

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  179 bits (456), Expect = 1e-51
 Identities = 115/373 (30%), Positives = 187/373 (50%), Gaps = 24/373 (6%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           Y PAT + +G  P     E +  +  A +A K W  ++ K+R   LR     ++E+++ +
Sbjct: 2   YNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDL 61

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKV 184
             + + + GK + +A  GEI+     + W   E +       R  G ++      K+  V
Sbjct: 62  ARLITLENGKPLKEAK-GEILYAASFLEWFAEEAK-------RVYGDTIPSPQSDKRLIV 113

Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
              P+GV  AI  WN+P   I     AA+ +G  +V+K +E    S     R+ + A   
Sbjct: 114 IKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA--- 170

Query: 245 VGAPENLVDVITGFA--ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300
            G P+ +++VITG    E G  L +S  V KI F GS  VG+++M+ ++ T+  V++ELG
Sbjct: 171 -GIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELG 229

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           G   FIV DD D+    + A+ +  +++GQ C  A R YVH  IY  F  ++A+ VK + 
Sbjct: 230 GNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLK 289

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
            G  L      G L   +  EK++  + DA++KGA+++  G   H   G    +F PTV+
Sbjct: 290 VGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR-HELGG---NFFEPTVL 345

Query: 421 VNVNHTMKLMQEE 433
            NV   M + +EE
Sbjct: 346 SNVTADMLVSKEE 358

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  179 bits (457), Expect = 1e-51
 Identities = 105/375 (28%), Positives = 160/375 (42%), Gaps = 32/375 (8%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
             PA           SR + +  +A A  A   WA ++  +R + L    + +    + +
Sbjct: 4   LNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDL 63

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGR----SMIHKK 181
            ++   + G T   A   E   T E    LL         ++ E   S      SM  + 
Sbjct: 64  IDLLIDEGGSTYGKA-WFETTFTPE----LLRAAAGECRRVRGETLPSDSPGTVSMSVR- 117

Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
                 PLGVV  I  +NYP       +  A+ +GN +V+K SE     G     I++ A
Sbjct: 118 -----RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172

Query: 242 LAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
               G P+ + +V+TG  AE G+ LV    V  + F GS  VGR I   A + L  +TLE
Sbjct: 173 ----GLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLE 228

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK+  IV  D D+ +  + A   A    GQ C  A R  V   +Y  FV +       
Sbjct: 229 LGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASK 288

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
           +  G P      +G L      E+++  V DA+ KGA++L  G      +G    ++ PT
Sbjct: 289 LKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK----YDGN---FYQPT 341

Query: 419 VIVNVNHTMKLMQEE 433
           V+ +V   M++ +EE
Sbjct: 342 VLTDVTPDMRIFREE 356

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  180 bits (458), Expect = 2e-51
 Identities = 109/395 (27%), Positives = 170/395 (43%), Gaps = 52/395 (13%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
              K   Y PAT + L      S A+VD  VA A  A   W++++ K+R + L  L   I
Sbjct: 15  EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAI 74

Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRS 172
            E+ +    + S + GK +  A   EI    +   +           + GE      Y  
Sbjct: 75  EENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGE------YLE 128

Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSEN 226
              SMI +       P+GVV +I  WNYP       M+A      A+ +GN +V+K SE 
Sbjct: 129 GHTSMIRRD------PVGVVASIAPWNYPL------MMAAWKLAPALAAGNTVVLKPSEI 176

Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRM 283
              +         A LAA   P  +++V+TG  A  G+ALV    V  +   GS   G+ 
Sbjct: 177 TPLT-ALKL----AELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKH 231

Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           ++  A+ ++    LELGGK   IV DD D+  V +        ++GQ+C  A R Y  R 
Sbjct: 232 VLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS 402
           IY   V+++A  V ++  G P     ++G L    H +++   V  A   G   ++  G 
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351

Query: 403 FGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEI 434
                  A D    Y+ PT++       +++Q E+
Sbjct: 352 -------APDGKGYYYEPTLLAGARQDDEIVQREV 379

Length = 475

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  179 bits (457), Expect = 3e-51
 Identities = 121/379 (31%), Positives = 186/379 (49%), Gaps = 27/379 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
           PAT + +G  PA +  +VD  V  ARKA      K WA+++   R ++LR +   I E +
Sbjct: 30  PATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERK 89

Query: 126 ELICEISSRDTGKTMVDASLGEI--MTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKK 181
             + ++ + D GK  +D +  ++  +  C +    L+E         + +  S  M   K
Sbjct: 90  SELAKLETLDCGKP-LDEAAWDMDDVAGCFEYYADLAEALD----AKQKAPVSLPMETFK 144

Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
             V   PLGVVG I  WNYP       +  A+ +G   V+K SE AS + C       A 
Sbjct: 145 GYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT-CLEL----AD 199

Query: 242 LAA-VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
           +   VG P  +++V+TG   E G  L S   VDKI F GS   GR IM  A++ + PV+L
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSL 259

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGGK   IV DDVD+    + A+     ++GQ C+   R  VH  I + F+ ++ K  K
Sbjct: 260 ELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAK 319

Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFP 416
           ++    PL     +G +      EK+   ++ A  +GA IL  G    HL +G    +  
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGF---FIE 376

Query: 417 PTVIVNVNHTMKLMQEEII 435
           PT+I +V  +M++ +EE+ 
Sbjct: 377 PTIITDVTTSMQIWREEVF 395

Length = 503

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  177 bits (452), Expect = 8e-51
 Identities = 110/379 (29%), Positives = 173/379 (45%), Gaps = 36/379 (9%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
             P   + +G  P  S  +V++ +A A++  K        +R + L    + + E +E  
Sbjct: 4   ISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEF 63

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE------YRSSGRSMIHKKA 182
               + + GK + DA   E+    E +  L +E  K L  E             +     
Sbjct: 64  ARTIALEAGKPIKDA-RKEVDRAIETLR-LSAEEAKRLAGETIPFDASPGGEGRIGFTIR 121

Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
           +    P+GVV AI  +N+P     H +  P +AA   GN +V+K +     S      ++
Sbjct: 122 E----PIGVVAAITPFNFPLNLVAHKV-GPAIAA---GNAVVLKPASQTPLSALKLAELL 173

Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
             A    G P+  ++V+TG  ET G+ALV+   V  I F GSP VG  I R A   L  V
Sbjct: 174 LEA----GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKV 227

Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
           TLELG   A IV  D D+    +  V  A  ++GQ C   +R +VH DIY  F+ +    
Sbjct: 228 TLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAA 287

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            K +  G PL    D+G +     +E+++  V +A++ GA +L     G   +GA+    
Sbjct: 288 TKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT----GGKRDGAI---L 340

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PTV+ +V   MK++ EE+
Sbjct: 341 EPTVLTDVPPDMKVVCEEV 359

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  175 bits (446), Expect = 6e-50
 Identities = 109/378 (28%), Positives = 167/378 (44%), Gaps = 29/378 (7%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126
            +PAT + +G +     AE +  +A AR+A     WA    + R + L  L      + E
Sbjct: 2   IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60

Query: 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKV 184
            +  + + + GK + +A   EI     ++ +   L+  E     E      S++ ++   
Sbjct: 61  RLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLRE--- 116

Query: 185 EFHPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
              P+GV G IV WN P         P LAA   G  +V+K    A  +      II+  
Sbjct: 117 ---PMGVAGIIVPWNSPVVLLVRSLAPALAA---GCTVVVKP---AGQTAQINAAIIRIL 167

Query: 242 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
                 P  +V++ T   +E    LV+S  VD I F GS   GR IM  A+ TL  + LE
Sbjct: 168 AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLE 227

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV DD D+        RA    +GQ C    R  V R I      ++A  + +
Sbjct: 228 LGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAA 287

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG--SFGHLSEGAVDQYFP 416
           V  GP L    DMG L    + +++  +V  A+  GAE++ RG      L++GA   +  
Sbjct: 288 VKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGA---FLR 344

Query: 417 PTVIVNVNHTMKLMQEEI 434
           PT++   +    ++QEEI
Sbjct: 345 PTLLEVDDPDADIVQEEI 362

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  173 bits (442), Expect = 3e-49
 Identities = 104/369 (28%), Positives = 165/369 (44%), Gaps = 29/369 (7%)

Query: 77  LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
           +G +   S  + D  +A A  A   W ++S + R   L      +   +E +  + +R+ 
Sbjct: 28  VGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREE 87

Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM--IHKKAKVEFH--PLGVV 192
           GKT+ +A  GE+    +   +   E         R SG ++       +VE    PLGVV
Sbjct: 88  GKTLPEA-RGEVTRAGQIFRYYAGEA-------LRLSGETLPSTRPGVEVETTREPLGVV 139

Query: 193 GAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           G I  WN+P   I      P LA    GN +V K +E    S    + +++  L   G P
Sbjct: 140 GLITPWNFPI-AIPAWKIAPALAY---GNTVVFKPAELTPASA---WALVEI-LEEAGLP 191

Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
             + +++ G  +E G+ALV    VD + F GS  VGR I   A+     V LE+GGK+  
Sbjct: 192 AGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPL 251

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           +V DD D+    + AV+ A  S+GQ C  + R  V   I+  FV  + +  K++  G  L
Sbjct: 252 VVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDAL 311

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
               D+G +      EK    +  A  +GA+++  G    L       Y  P +   V +
Sbjct: 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGG--ERLKRPDEGYYLAPALFAGVTN 369

Query: 426 TMKLMQEEI 434
            M++ +EEI
Sbjct: 370 DMRIAREEI 378

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  171 bits (435), Expect = 2e-48
 Identities = 104/355 (29%), Positives = 164/355 (46%), Gaps = 21/355 (5%)

Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
             A+VD   A+A  AQ+ WA +  ++R   LR     + EH + I +   R++G     A
Sbjct: 11  DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA 70

Query: 144 --SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
              +G  +    +   L ++ +  + P   + GR  + ++      PLGVVG I  +N+P
Sbjct: 71  GFEVGAAIGELHEAAGLPTQPQGEILPS--APGRLSLARRV-----PLGVVGVISPFNFP 123

Query: 202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 261
                  +  A+  GN +V+K       SG     +I       G P  ++ V+ G A+ 
Sbjct: 124 LILAMRSVAPALALGNAVVLKPDPRTPVSGGV---VIARLFEEAGLPAGVLHVLPGGADA 180

Query: 262 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
           GEALV    V  I F GS  VGR +   A + L  V+LELGGK+A IV DD D+   A  
Sbjct: 181 GEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASN 240

Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
               A    GQ C  A R  VH  +   + +++A   K +  G P  G+  +G L     
Sbjct: 241 GAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQ 300

Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            +++  +V+D++  GA + A G++    +G    ++ PTV+  V   M    EEI
Sbjct: 301 LDRVHAIVDDSVAAGARLEAGGTY----DG---LFYRPTVLSGVKPGMPAFDEEI 348

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  170 bits (433), Expect = 7e-48
 Identities = 112/380 (29%), Positives = 178/380 (46%), Gaps = 38/380 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
           PAT + L    A + A+V+  VA A++ QK+WA  +  +R    RIL +    + E  + 
Sbjct: 29  PATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS---RILRRAVDILRERNDE 85

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKA 182
           +  + + DTGK + + S+ +I+T  + + +        EGE     +    G S ++ + 
Sbjct: 86  LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGE-----QIPLRGGSFVYTRR 140

Query: 183 KVEFHPLGVVGAIVSWNYPFHNIF----NPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
           +    PLGV   I +WNYP   I      P LAA   GN ++ K SE    +      I 
Sbjct: 141 E----PLGVCAGIGAWNYPIQ-IACWKSAPALAA---GNAMIFKPSEVTPLTALKLAEIY 192

Query: 239 QAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
             A    G P+ + +V+ G    G  L     + K+ F G    G+ +M  A+ +L  VT
Sbjct: 193 TEA----GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVT 248

Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
           +ELGGK   IV DD D+   A IA+ A   SSGQ C    R +V + I A F +++ + V
Sbjct: 249 MELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERV 308

Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--Y 414
           + +  G P+    + G L    H +K+   +     +GA +L  G    L+EG      +
Sbjct: 309 ERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG--ERLTEGGFANGAF 366

Query: 415 FPPTVIVNVNHTMKLMQEEI 434
             PTV  +    M +++EEI
Sbjct: 367 VAPTVFTDCTDDMTIVREEI 386

Length = 488

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  170 bits (432), Expect = 9e-48
 Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 25/376 (6%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125
             PAT + +       +A+VD+ V  AR A K    W      +R + L  L   I   +
Sbjct: 27  INPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDR 86

Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
             +  + + D GK    + L ++    + + +     +K         G    + + +  
Sbjct: 87  AYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHE-- 144

Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
             P+GV G I+ WN+P         P LA    GN +V+K +E    +  +   +I+ A 
Sbjct: 145 --PVGVCGQIIPWNFPLLMAAWKLAPALAC---GNTVVLKPAEQTPLTALYLASLIKEA- 198

Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLE 298
              G P  +V+V+ G+  T  A +SS   +DK+ F GS  VG++I + A K+ L  VTLE
Sbjct: 199 ---GFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLE 255

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV  D D+ +  + A  A   + GQ C    R +V   IY  FV +  +  K 
Sbjct: 256 LGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKK 315

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
              G P   K + G     E  +K+  L+     +GA++   G       G    +  PT
Sbjct: 316 RVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK----RHGDKGYFIQPT 371

Query: 419 VIVNVNHTMKLMQEEI 434
           V  +V   M++ +EEI
Sbjct: 372 VFSDVTDDMRIAKEEI 387

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  168 bits (428), Expect = 2e-47
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 19/381 (4%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
           R   SE  +    P T + L   PA S+ +VDE    A  AQK WA +  ++R + L   
Sbjct: 4   RDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKA 63

Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
            + + E ++ I E   R++G T + A++ E       +          L+ E R     +
Sbjct: 64  AQILEERRDEIVEWLIRESGSTRIKANI-EWGAA---MAITREAATFPLRMEGRILPSDV 119

Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-R 236
             K+ +V   PLGVVG I  WN+P H     +  A+  GN +V+K + +   +G     +
Sbjct: 120 PGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAK 179

Query: 237 IIQAALAAVGAPENLVDVITG-FAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLT 293
           I + A    G P+ +++V+ G  +E G+A V   V ++I F GS  VGR I   A + L 
Sbjct: 180 IFEEA----GLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLK 235

Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
            V LELGG + F+V +D D+      AV       GQ C    R  VH D+Y  FV +  
Sbjct: 236 KVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFV 295

Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
           + VK++  G P      +G L      + L + +  A+++GA +L  G        A   
Sbjct: 296 ERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGN 348

Query: 414 YFPPTVIVNVNHTMKLMQEEI 434
              PTV+ +V + M++ +EEI
Sbjct: 349 VLEPTVLSDVTNDMEIAREEI 369

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  168 bits (427), Expect = 3e-47
 Identities = 99/372 (26%), Positives = 163/372 (43%), Gaps = 26/372 (6%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P   + +G  PA  RA+ +E +A AR   +        +R   L      + +  E   +
Sbjct: 6   PYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAK 65

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
           I + + GK + DA   E+    + +     E     GE+      + S   +     +  
Sbjct: 66  IIACEGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE-- 122

Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
             P+GVV AI  +N+P + + + +  A+ +G  +V+K +     S     +I+  A    
Sbjct: 123 --PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA---- 176

Query: 246 GAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302
           G PE ++ V+TG     G+A  +   V  + F GS  VG  +  NA      + LELGG 
Sbjct: 177 GVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK--RIALELGGN 234

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
              IV  D D+    +   +     +GQ C   +R YVH ++Y  F+      VK +  G
Sbjct: 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVG 294

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
            PL    D+G L   E +E+++  V +A++ GA +L  G      +GA+   F PTV+ +
Sbjct: 295 DPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE----RDGAL---FKPTVLED 347

Query: 423 VNHTMKLMQEEI 434
           V    KL  EE 
Sbjct: 348 VPRDTKLSTEET 359

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  168 bits (428), Expect = 3e-47
 Identities = 110/360 (30%), Positives = 170/360 (47%), Gaps = 28/360 (7%)

Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTM 140
            +VD  V  ARKA  +  W + +  +R    RILL++   + +H + +  + + D GK  
Sbjct: 41  EDVDRAVKAARKAFDEGPWPRMTGYERS---RILLRFADLLEKHADELAALETWDNGKPY 97

Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGVVGAIVSWN 199
             A   E+        +     +K       + G   ++       H P+GVVG I+ WN
Sbjct: 98  EQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYT-----LHEPIGVVGQIIPWN 152

Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVITGF 258
           +P       +  A+  GN IV+K +E    S         A LAA  G P+ +++++TGF
Sbjct: 153 FPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA-----AKLAAEAGLPDGVLNIVTGF 207

Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
             T  A ++S   VDK+ F GS  VG++IM+ A+K+ L PVTLELGGK  FIVC+D DV 
Sbjct: 208 GPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD 267

Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 374
              ++A  A   + GQ C    R +VH  IY  FV +          G P     + G  
Sbjct: 268 KAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQ 327

Query: 375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              E  EK+ + +    ++GA ++  G       G+   Y  PT+  +V   MK+ ++EI
Sbjct: 328 VDKEQFEKILSYIEHGKEEGATLITGGD----RIGSKGYYIQPTIFSDVKDDMKIARDEI 383

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  166 bits (422), Expect = 4e-47
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 34/334 (10%)

Query: 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKWLKP 168
           LR +   I E    I  +   + GK    A + E+  T + I ++       EGE  +  
Sbjct: 1   LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE--IIQ 57

Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
             R     ++ K+       LGV   I+ WN+PF  I   M  A+ +GN IVIK SE   
Sbjct: 58  SDRPGENILLFKR------ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTP 111

Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIM 285
            +    F  I   +  +G P+ + +++ G  ET G+ L  +  V  +   GS   G  IM
Sbjct: 112 -NNAIAFAKI---VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 167

Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVH 341
             A+K +T V LELGGK   IV DD D+     +AV+A + S    SGQ C  AER YV 
Sbjct: 168 AAAAKNITKVCLELGGKAPAIVMDDADLD----LAVKAIVDSRVINSGQVCNCAERVYVQ 223

Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
           + IY  FV+++ + +++V  G P       MG L      E+++  V  A+++GA +   
Sbjct: 224 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALG 283

Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G     +      Y+PPT++++V   M +M EE 
Sbjct: 284 GK----AVEGKGYYYPPTLLLDVRQEMSIMHEET 313

Length = 409

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  166 bits (423), Expect = 8e-47
 Identities = 112/364 (30%), Positives = 166/364 (45%), Gaps = 44/364 (12%)

Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------ 140
           + D+ V  A  A   W+K+   +RR  L      +   ++   E    +TG T       
Sbjct: 1   DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60

Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
           VD + G +      IT ++        P  +    +M+ K+      P+GVV  I  WN 
Sbjct: 61  VDLAAGMLREAASLITQIIGG----SIPSDKPGTLAMVVKE------PVGVVLGIAPWNA 110

Query: 201 PFH----NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
           P       I  P LAA   GN +V+K SE +      +  I +    A G P+ +++V+T
Sbjct: 111 PVILGTRAIAYP-LAA---GNTVVLKASELSP--RTHWL-IGRVFHEA-GLPKGVLNVVT 162

Query: 257 GFAETG----EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
              E      EAL++   V K+ F GS  VGR+I   A+K L PV LELGGK   IV +D
Sbjct: 163 HSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222

Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK-Y 369
            D+   A  A+  A  +SGQ C   ER  VH  I   FV ++    + + AGP + G   
Sbjct: 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLV 282

Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
              A      +++++ LV+DAL KGA+++  G  G   E       PPT++ NV   M +
Sbjct: 283 SAAA------ADRVKELVDDALSKGAKLVV-G--GLADESPSGTSMPPTILDNVTPDMDI 333

Query: 430 MQEE 433
             EE
Sbjct: 334 YSEE 337

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  167 bits (425), Expect = 8e-47
 Identities = 107/392 (27%), Positives = 172/392 (43%), Gaps = 38/392 (9%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           +I  +   P++        PAT + L         +VD  VA AR A + W+      R 
Sbjct: 25  FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA 84

Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
           + L  + ++I +HQ L   + S D GK + ++   +I                     Y 
Sbjct: 85  RHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHF--------------YH 130

Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENAS 228
            +G + +       + P+GVVG IV WN+P   +     P LA    GN +V+K +E   
Sbjct: 131 HAGWAQLLDTELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAM---GNTVVLKPAEYTP 187

Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
            +   +  I   A    G P  +++++TG    G AL +   VDK+ F GS  VGR + R
Sbjct: 188 LTALLFAEICAEA----GLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRR 243

Query: 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
             + T   ++LELGGK  FIV DD D+    +  V A   + GQ C    R  V   +  
Sbjct: 244 ATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAE 303

Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG----S 402
             + ++ + +  +  G PL    DMGA+      ++++ LV +   +GA++   G    S
Sbjct: 304 ELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS 363

Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            G         ++PPT+  NV    ++ QEEI
Sbjct: 364 KGP--------FYPPTLFTNVPPASRIAQEEI 387

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  167 bits (424), Expect = 9e-47
 Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 31/397 (7%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQR 110
           +I  R    QSE ++    PAT + +    + + A+VD  VA A +A    WAK++  +R
Sbjct: 3   FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62

Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS--------EG 162
            + L  L   I +H E + ++ +  +GK++    L       +   +L           G
Sbjct: 63  GRILLRLADLIEQHGEELAQLETLCSGKSI---HLSRAFEVGQSANFLRYFAGWATKING 119

Query: 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
           E  L P   S         A     P+GVV  IV WN+        + AA+ +G  IVIK
Sbjct: 120 ET-LAPSIPSMQGE--RYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176

Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGV 280
            SE    +     R+ + A  A G P+ +++V+ G    G  L+S   V K+ F GS   
Sbjct: 177 PSEFTPLT---LLRVAELAKEA-GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232

Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
           G+ I R A+  LT VTLELGGK+A     D D+  V +  + A     GQ CA  ERFYV
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYV 292

Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
           HR  +   V+++ + + S   G P+      G L    H +K+ + ++DA  +G EI+  
Sbjct: 293 HRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRG 352

Query: 401 GSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEI 434
           G        A+     +  PT+++  +   +LM+EE 
Sbjct: 353 G-------EALAGEGYFVQPTLVLARSADSRLMREET 382

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  164 bits (417), Expect = 6e-46
 Identities = 96/352 (27%), Positives = 157/352 (44%), Gaps = 18/352 (5%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
            E+D   ++ R   +       + R   L+ L   + +++E I E   +D G+   +  L
Sbjct: 5   DEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLL 64

Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
            E+      I  +L   +KW K E    G    M  K  ++   PLGVV  I  WNYP  
Sbjct: 65  TEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGK-PRIRKEPLGVVLIIGPWNYPVL 123

Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETG 262
              +P++ A+ +G  +V+K SE    +      ++   L       +   V+ G   ET 
Sbjct: 124 LALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL-----DPDAFQVVQGGVPETT 178

Query: 263 EALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
             L    DKI + GS  VGR+I   A+K LTPVTLELGGK   IV  + D+   A+  + 
Sbjct: 179 ALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238

Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
               ++GQ C   +   V   +Y  FV ++ K++     G   A   D   +    H  +
Sbjct: 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASP-DYTRIVNPRHFNR 297

Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           L++L++    KG +++  G           ++ PPT++ +V+    LM EE+
Sbjct: 298 LKSLLDTT--KG-KVVIGGEM-----DEATRFIPPTIVSDVSWDDSLMSEEL 341

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  164 bits (417), Expect = 1e-45
 Identities = 108/378 (28%), Positives = 167/378 (44%), Gaps = 20/378 (5%)

Query: 64  TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKS-SFKQRRQFLRILLKYI 121
             V+ Y P+T K +      + A+VD  V  A  A +  W    S  +R + L  L   +
Sbjct: 22  GTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLM 81

Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
             + + +  I + D GKT   A   ++  + +   +       W    +     + I K 
Sbjct: 82  ERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGG----WADKIHGQVIETDIKKL 137

Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
                 P+GV G I+ WN+P       +  A+ +GN IV+K SE    S  +  ++I  A
Sbjct: 138 TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197

Query: 242 LAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTL 297
               G P  +++V++G+  T    +SS   +DK+ F GS  VGR +M  A+K+ L  VTL
Sbjct: 198 ----GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTL 253

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGGK   IV DD D+             + GQ C    R YV   IY  FV +  +  K
Sbjct: 254 ELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313

Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 416
            +  G P A     G        E++ + +     +GA  +  G   H +EG    YF  
Sbjct: 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGAT-VETGGKRHGNEG----YFIE 368

Query: 417 PTVIVNVNHTMKLMQEEI 434
           PT+  +V   MK+++EEI
Sbjct: 369 PTIFTDVTEDMKIVKEEI 386

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  163 bits (414), Expect = 2e-45
 Identities = 96/330 (29%), Positives = 156/330 (47%), Gaps = 17/330 (5%)

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
             + R + L+ L + I +++  I E   +D GK+  +A + EI     +I + +   +KW
Sbjct: 18  DVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKW 77

Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
           +KP+   +       K+ + + P GVV  I  WNYPF     P++ A+ +GN  V+K SE
Sbjct: 78  MKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSE 137

Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS-VDKIIFVGSPGVGRMI 284
               +     +II+         E  V V+ G  E  + L+    D I F GS  VG+++
Sbjct: 138 LTPNTSKVIAKIIEETF-----DEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIV 192

Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
           M  A+K LTPVTLELGGK   IV +D ++   A+  V     ++GQ C   +   VH  +
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV 252

Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
              F+ ++ + +K      PL    D G +   +H ++L  L+        +I+  G+  
Sbjct: 253 KEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAGLL-----DNGKIVFGGNTD 306

Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                    Y  PT++ NV     +MQEEI
Sbjct: 307 RE-----TLYIEPTILDNVTWDDPVMQEEI 331

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  160 bits (406), Expect = 3e-44
 Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 16/369 (4%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           PA    +  +   +  +VD  VA ARKA  +  W + S  +R   L  +   I   +E +
Sbjct: 4   PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
             I + ++GK  +  + GEI    +   +  S         Y + G  M+     V   P
Sbjct: 64  ALIETLESGKP-ISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDML---GLVLREP 119

Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           +GVVG I  WN+PF  +   +  A+ +G  +V+K SE  S +      + +  + A G P
Sbjct: 120 IGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT---LMLAELLIEA-GLP 175

Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
             +V+++TG+ A  G+A+     VD + F GS  VG+ I   A++ L  V+LELGGK+  
Sbjct: 176 AGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQ 235

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           IV  D D+   A   V     ++G+ C    R  VH  I   FV+ V    + V  G PL
Sbjct: 236 IVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPL 295

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
             +  +GA+       K+ + V+    +GA +L  G    L+  A   ++ PT+  +V  
Sbjct: 296 DPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGG--ERLASAA-GLFYQPTIFTDVTP 352

Query: 426 TMKLMQEEI 434
            M + +EEI
Sbjct: 353 DMAIAREEI 361

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  156 bits (397), Expect = 6e-43
 Identities = 107/369 (28%), Positives = 174/369 (47%), Gaps = 21/369 (5%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA    LG  P +   E    +  A +A   W   + K+R   LR     ++EHQ+ +  
Sbjct: 33  PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLAR 92

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFH 187
           + + + GK + +A  GEI      I W   EG++      P +++  R ++ K+      
Sbjct: 93  LMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------ 145

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV  AI  WN+P   I      A+ +G  +V+K +    +S      +   A    G 
Sbjct: 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA----GI 201

Query: 248 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 304
           P  + +V+TG A   G  L S+  V K+ F GS  +GR +M   +K +  V+LELGG   
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261

Query: 305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
           FIV DD D+    + A+ +  +++GQ C  A R YV   +Y  F  ++ + V  +  G  
Sbjct: 262 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDG 321

Query: 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 424
           L     +G L   +   K++  + DAL+KGA ++  G   H   G    +F PT++V+V 
Sbjct: 322 LEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHELGG---NFFQPTILVDVP 377

Query: 425 HTMKLMQEE 433
              K+ +EE
Sbjct: 378 ANAKVAKEE 386

Length = 482

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  156 bits (396), Expect = 1e-42
 Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 15/330 (4%)

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
             + R+Q LR LL+ + E+++   E   +D G+   +  + E++ T  +I  LL   +++
Sbjct: 27  PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEY 86

Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
           LKPE   +       K+ +   PLGVV  I +WNYP +    P+  A+ +GN +V+K SE
Sbjct: 87  LKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSE 146

Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMI 284
            +  +     +++   L       + V VI G  E T E L    D I F GSP VG+++
Sbjct: 147 LSPHTSKLMAKLLTKYL-----DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLV 201

Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
           M+ A++ LTP TLELGGK   IV    ++   A+        ++GQ C   +   VHR I
Sbjct: 202 MQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261

Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
              F+  + + +K    G       D   +    H+++L  L+    D G +++  G   
Sbjct: 262 KDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV- 316

Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                  ++Y  PT+IVN +    LMQEEI
Sbjct: 317 ----DIENKYVAPTIIVNPDLDSPLMQEEI 342

Length = 493

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  155 bits (393), Expect = 2e-42
 Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 41/377 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK---YIIEHQEL 127
           P T + +G  PA +   + E +A A       +  S   R Q   IL K    +   +E 
Sbjct: 6   PYTGEVVGTVPAGTEEALREALALAA------SYRSTLTRYQRSAILNKAAALLEARREE 59

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKA 182
              + + ++G  + D    E+    + + +  +E         R  G S       + KA
Sbjct: 60  FARLITLESGLCLKDT-RYEVGRAADVLRFAAAEAL-------RDDGESFSCDLTANGKA 111

Query: 183 KVEF---HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
           +  F    PLGVV AI  +N+P + + + +  A+ + N IV+K SE    S   Y   + 
Sbjct: 112 RKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS-AIYLADL- 169

Query: 240 AALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
             L   G P +++ V+TG   E G+ L++   VD + F G   VG+ I   A+       
Sbjct: 170 --LYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA--ATAGYKRQL 225

Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
           LELGG D  IV DD D+   A +AV  +  +SGQ C   +R  VH  +   FV  + +  
Sbjct: 226 LELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKS 285

Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
            ++  G P+    DMG +   E + +++N V +A+ +GA +L     G+  +GA+   + 
Sbjct: 286 AALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVL----LGNQRQGAL---YA 338

Query: 417 PTVIVNVNHTMKLMQEE 433
           PTV+ +V    +L+ EE
Sbjct: 339 PTVLDHVPPDAELVTEE 355

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  155 bits (394), Expect = 3e-42
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 35/374 (9%)

Query: 77  LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY--IIEHQ--ELICEIS 132
           LG     ++ E +  V  AR A   W ++  ++R    R+LL+   ++  +  EL   + 
Sbjct: 60  LGTVQKATKEEAEAAVQAARAAFPTWRRTPPEER---ARLLLRAAALLRRRRFELAAWM- 115

Query: 133 SRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH-PLGV 191
             + GK   +A   ++    E I +L     + L+   R     M+  +     + PLGV
Sbjct: 116 VLEVGKNWAEA-DADV---AEAIDFLEYYAREMLR--LRGFPVEMVPGEDNRYVYRPLGV 169

Query: 192 VGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
              I  WN+P   I   M  AA+ +GN +V+K +E+          I++ A    G P  
Sbjct: 170 GAVISPWNFPL-AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA----GLPPG 224

Query: 251 LVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGG 301
           +V+ + G  E  G+ LV    V  I F GS  VG  I   A+K       L  V  E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284

Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
           K+A IV +D D+   A+  VR+A    GQ C+   R  VH  +Y  F+ ++ +  K++  
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344

Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVI 420
           G P   +  MG +      ++++  +     K    L  G  G + E A + YF  PT+ 
Sbjct: 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIG--KSEGRLLLG--GEVLELAAEGYFVQPTIF 400

Query: 421 VNVNHTMKLMQEEI 434
            +V    +L QEEI
Sbjct: 401 ADVPPDHRLAQEEI 414

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  153 bits (390), Expect = 4e-42
 Identities = 102/348 (29%), Positives = 162/348 (46%), Gaps = 25/348 (7%)

Query: 92  VAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 151
           V +AR+A         + R Q L  LL+ + E+++ I E  ++D  K   +A L EI+  
Sbjct: 4   VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63

Query: 152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPM 209
             +I + +S   +W+KPE     +++      V  +  PLGVV  I +WNYP      P+
Sbjct: 64  KNEIKYAISNLPEWMKPEP--VKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPL 121

Query: 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS 268
           + A+ +GN +VIK SE +  +      +I   L      +    V+ G   ET E L   
Sbjct: 122 VGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL-----DKECYPVVLGGVEETTELLKQR 176

Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS 328
            D I + GS  VG+++M+ A+K LTPVTLELGGK    V    D+   A+        ++
Sbjct: 177 FDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA 236

Query: 329 GQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
           GQ C   +  YV    ++   FV  + K +K      P     D G +    H ++L+ L
Sbjct: 237 GQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKL 293

Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +      G ++   G          ++Y  PTV+ +V  +  +MQEEI
Sbjct: 294 L-----SGGKVAIGGQT-----DEKERYIAPTVLTDVKPSDPVMQEEI 331

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  153 bits (388), Expect = 9e-42
 Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 44/382 (11%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + +  F AL+  EVD  +A+A    + +  ++F QR ++       +    + +  
Sbjct: 8   PATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAA 67

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE---YRSSGRSMIHKKAKVEFH 187
           + + + GKT+  A   E +   +   +     E  L  E     + G S    +A V + 
Sbjct: 68  LMTLEMGKTLASAK-AEALKCAKGFRYYAEHAEALLADEPADAAAVGAS----RAYVRYQ 122

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           PLGVV A++ WN+P   +      A+ +GN  ++K + N          + Q AL     
Sbjct: 123 PLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASN----------VPQTALY---- 168

Query: 248 PENLVDVIT--GFAET--GEALVSS--VDKII---------FVGSPGVGRMIMRNASKTL 292
              L D+    GF +      LV S  V+ I+           GS   GR +   A   +
Sbjct: 169 ---LADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEI 225

Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
               LELGG D FIV    D+   A+ AV A +Q++GQ+C  A+RF VH D+Y  F  + 
Sbjct: 226 KKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKF 285

Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
              + ++  G P     D+G L   +  ++++  V+DA+  GA IL     G   +G   
Sbjct: 286 VARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCG---GKRPDGP-G 341

Query: 413 QYFPPTVIVNVNHTMKLMQEEI 434
            ++PPTVI ++   M+L  EE+
Sbjct: 342 WFYPPTVITDITPDMRLYTEEV 363

Length = 457

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  152 bits (385), Expect = 7e-41
 Identities = 112/362 (30%), Positives = 173/362 (47%), Gaps = 34/362 (9%)

Query: 87  EVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMV 141
           +V+  VA ARKA  +  W K +  +R    RILL++   + +H + +  + + D GK   
Sbjct: 96  DVNRAVAAARKAFDEGPWPKMTAYERS---RILLRFADLLEKHNDELAALETWDNGKPYE 152

Query: 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 201
            ++  E+        +     +K       + G   +         P+GV G I+ WN+P
Sbjct: 153 QSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQ----TLHEPIGVAGQIIPWNFP 208

Query: 202 ---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
              F     P LA    GN IV+K +E    S  +  +++  A    G P  +++V++GF
Sbjct: 209 LLMFAWKVGPALAC---GNTIVLKTAEQTPLSALYAAKLLHEA----GLPPGVLNVVSGF 261

Query: 259 AETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 314
             T  A ++S   VDK+ F GS   G++++  A+K+ L PVTLELGGK  FIVC+D DV 
Sbjct: 262 GPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321

Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGA 373
              ++A  A   + GQ C    R +VH  +Y  FV +  A+ +K V  G P     + G 
Sbjct: 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRV-VGDPFKKGVEQGP 380

Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432
               E  EK+   +   ++ GA +   G  FG  S+G    Y  PTV  NV   M + Q+
Sbjct: 381 QIDSEQFEKILRYIKSGVESGATLECGGDRFG--SKG---YYIQPTVFSNVQDDMLIAQD 435

Query: 433 EI 434
           EI
Sbjct: 436 EI 437

Length = 538

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  149 bits (378), Expect = 4e-40
 Identities = 111/379 (29%), Positives = 171/379 (45%), Gaps = 33/379 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + LG       A+VD     A++A K WA+    +R+++L  +   I +H + I  
Sbjct: 23  PATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAV 82

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFH 187
           +   D G+ +      + +    +     ++     K E    GR+     H    V   
Sbjct: 83  LECLDCGQPL--RQTRQQVIRAAENFRFFAD-----KCEEAMDGRTYPVDTHLNYTV-RV 134

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
           P+G VG I  WN PF      ML+      A+  GN +V+K +E   WS     R+ + A
Sbjct: 135 PVGPVGLITPWNAPF------MLSTWKIAPALAFGNTVVLKPAE---WSPLTAARLAEIA 185

Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
             A G P+ + +++ GF E  G+ALV+   V  + F G    G +IMRN + TL   ++E
Sbjct: 186 KEA-GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSME 244

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV DD D+       V      +G+ C  + R  V   I   FV ++ + V++
Sbjct: 245 LGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRA 304

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV---DQYF 415
           +  G PL  + ++G L   EH  K+   V  A  +GA IL  G       G       Y 
Sbjct: 305 IRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYV 364

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PTV    ++ M++ QEEI
Sbjct: 365 LPTVFTGADNHMRIAQEEI 383

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  149 bits (379), Expect = 4e-40
 Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 42/368 (11%)

Query: 85  RAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKY---IIEHQELICEISSRDTGKT 139
           + +VD  V  AR+A     W + S  +R    RI++K+   I EH E +  + + D GK 
Sbjct: 57  KEDVDLAVKAAREAFDHGPWPRMSGFERG---RIMMKFADLIEEHIEELAALDTIDAGKL 113

Query: 140 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK---KAKVEFH------PLG 190
                  +I      + +     +K             IH    K   +        P+G
Sbjct: 114 FALGKAVDIPAAAGLLRYYAGAADK-------------IHGETLKMSRQLQGYTLKEPIG 160

Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
           VVG I+ WN+P    F  +  A+ +G  +V+K +E    S  FY  + + A    G P+ 
Sbjct: 161 VVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA----GVPDG 216

Query: 251 LVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFI 306
           +++V+TGF  T  A ++S   VDK+ F GS  VGR IM+ A+ + L  V+LELGGK   +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276

Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
           + DD DV     +A+     + G+ C  + R YV   IY  FV ++ +  K    G P  
Sbjct: 277 IFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFD 336

Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 426
            +   G     +  EK+ + +     +GA +L  G       G    Y  PT+  +V   
Sbjct: 337 PRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGYYIEPTIFTDVTED 392

Query: 427 MKLMQEEI 434
           MK+ Q+EI
Sbjct: 393 MKIAQDEI 400

Length = 501

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  149 bits (377), Expect = 4e-40
 Identities = 105/375 (28%), Positives = 170/375 (45%), Gaps = 24/375 (6%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P T K     P  +  +++  +  A  A++ W K+S  +R   L  +   +  + E++  
Sbjct: 23  PVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAV 82

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA-KVEFH-P 188
             + D GK + +    +I    +   +        ++ +      S I +      FH P
Sbjct: 83  AETWDNGKPVRETLAADIPLAIDHFRYFAGC----IRAQ--EGSISEIDENTVAYHFHEP 136

Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           LGVVG I+ WN+P       +  A+ +GN +V+K +E    S      +I   L     P
Sbjct: 137 LGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLL-----P 191

Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
             +V+V+ GF  E G+ L SS  + K+ F G    GR+IM+ AS+ + PVTLELGGK   
Sbjct: 192 PGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPN 251

Query: 306 IVCDDVDVPHVA------QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           I   DV     A      +  V  AL + G+ C    R  +   IY  F+ +  + VK++
Sbjct: 252 IFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERVKAI 310

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G PL  +  +GA   LE  EK+ + ++   ++GAE+L  G    L       Y+ PT 
Sbjct: 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTT 370

Query: 420 IVNVNHTMKLMQEEI 434
                + M++ QEEI
Sbjct: 371 FKG-GNKMRIFQEEI 384

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  145 bits (369), Expect = 3e-39
 Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 30/341 (8%)

Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
           +VD  VA AR A   WA  S ++R   LR   + +  ++E +  + SR+TGK + +A   
Sbjct: 1   QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QT 59

Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
           E+     KI   +         E        M   +A +   P GV+     +N+P H  
Sbjct: 60  EVAAMAGKIDISIKAYH-----ERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLP 114

Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
              ++ A+ +GN +V K SE           + + A    G P  +++++ G  ETGEAL
Sbjct: 115 NGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA----GLPPGVLNLVQGGRETGEAL 170

Query: 266 VSS--VDKIIFVGSPGVGRMIMR----NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
            +   +D ++F GS   G ++ R       K L    LE+GG +  +V D  D+   A +
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKIL---ALEMGGNNPLVVWDVADIDAAAYL 227

Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
            V++A  ++GQ C  A R  V        F+ ++ +  K +  G P A    MG L +  
Sbjct: 228 IVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAA 287

Query: 379 HSEKLQNLVNDALDKGAEIL-------ARGSFGHLSEGAVD 412
            + +      D L  G E L       A  +F  LS G +D
Sbjct: 288 AAARYLLAQQDLLALGGEPLLAMERLVAGTAF--LSPGIID 326

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  145 bits (368), Expect = 1e-38
 Identities = 100/392 (25%), Positives = 173/392 (44%), Gaps = 24/392 (6%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           +I       ++   +  Y PAT + +   P  +  EVD  VA A+ A   W+ +   +R 
Sbjct: 4   FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKR- 62

Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
              +++ K+   + E+ + +  + + + GKT+ DA  G+++   E + +  S     LK 
Sbjct: 63  --QQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHL-LKG 118

Query: 169 EY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH--NIFNPMLAAVFSGNGIVIKVSE 225
           EY  +  R +          PLGVV  I  +N+P        PM  A+  GN  V+K SE
Sbjct: 119 EYLENVARGID---TYSYRQPLGVVAGITPFNFPAMIPLWMFPM--AIACGNTFVLKPSE 173

Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283
               +      ++Q A    G P+ +++V+ G  E   AL+    +  + FVGS  VG  
Sbjct: 174 RVPGAAMRLAELLQEA----GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEY 229

Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           I   A+     V    G K+  +V  D D+   A   V AA  ++GQ C          D
Sbjct: 230 IYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGD 289

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
               ++ ++ +  K +  G       DMG +      E+++ L+   +++GA+++  G  
Sbjct: 290 EADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGR- 348

Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
           G    G  +  F  PT++ NV   MK+ +EEI
Sbjct: 349 GVKVPGYENGNFVGPTILDNVTPDMKIYKEEI 380

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  143 bits (363), Expect = 4e-38
 Identities = 101/364 (27%), Positives = 162/364 (44%), Gaps = 37/364 (10%)

Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
              +++E +A A KA +        +R   L   +  + E  E + E    + GK + DA
Sbjct: 19  GPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78

Query: 144 SLGEIMTTCEKITWLLSE-----GEKWLKPEY--RSSGRSMIHKKAKVEFHPLGVVGAIV 196
             GE+    +       E     GE  L  +   R  GR  + ++      P+G V AI 
Sbjct: 79  R-GEVARAIDTFRIAAEEATRIYGE-VLPLDISARGEGRQGLVRRF-----PIGPVSAIT 131

Query: 197 SWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 252
            +N+P     H +  P +AA   G   V+K +     S      I+   LA  G P+   
Sbjct: 132 PFNFPLNLVAHKV-APAIAA---GCPFVLKPASRTPLSAL----ILGEVLAETGLPKGAF 183

Query: 253 DVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 310
            V+    +  + LV+   +  + F GSP VG  +   A K    V LELGG  A IV  D
Sbjct: 184 SVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSD 241

Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
            D+   AQ  +  A   +GQ+C   +R  VHR +Y  F S++   VK++  G P     D
Sbjct: 242 ADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATD 301

Query: 371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430
           +G +     +E+++  VN+A+D GA++L  G      +GA+     PT++ +V   M++ 
Sbjct: 302 VGPMISESEAERVEGWVNEAVDAGAKLLTGGK----RDGAL---LEPTILEDVPPDMEVN 354

Query: 431 QEEI 434
            EE+
Sbjct: 355 CEEV 358

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score =  142 bits (361), Expect = 9e-38
 Identities = 104/353 (29%), Positives = 159/353 (45%), Gaps = 19/353 (5%)

Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
           ++  VA+ R+  +     S + R+  L+ LL+ + +++E I +   +D GK  V+A   E
Sbjct: 8   LEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDE 67

Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
           +    +     LS  +KW+ P+            A+V   PLGVV    SWN+P      
Sbjct: 68  VGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLE 127

Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
           P++ A+ +GN +V+K SE A  +  F    I   L +       V VI G    GE L+ 
Sbjct: 128 PLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDS-----KAVKVIEGGPAVGEQLLQ 182

Query: 268 SV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326
              DKI F GSP VGR+IM  A+K LTPV LELGGK   IV D +      ++AV   + 
Sbjct: 183 HKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIV-DSLSSSRDTKVAVNRIVG 241

Query: 327 S-----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381
                 +GQ C   +   V      + +  +   +K      P   K  M  +   +H +
Sbjct: 242 GKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKS-MARILNKKHFQ 300

Query: 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +L NL+ D     A I+  GS           +  PT+++N      +M EEI
Sbjct: 301 RLSNLLKDPRVA-ASIVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEI 347

Length = 484

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  141 bits (357), Expect = 1e-37
 Identities = 97/334 (29%), Positives = 154/334 (46%), Gaps = 20/334 (5%)

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
           S + R+  L+ LL+ + E+++ I     +D GK   ++   E+          + E +KW
Sbjct: 19  SAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKW 78

Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
           + PE   +  +    KA++   PLGVV  I +WN+PF     P++ A+ +GN +V+K SE
Sbjct: 79  MAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSE 138

Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSV-DKIIFVGSPGVGRMI 284
            A  +     ++I   L         + VI G      AL+    DKI F GSP VGR+I
Sbjct: 139 LAPATSALLAKLIPEYLDT-----KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRII 193

Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFYVHRD 343
           M  A+K LTPVTLELGGK   IV   VD+    + IA      ++GQ C   +   V   
Sbjct: 194 MAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEES 253

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
                +  +   ++      P   K D+  +    H ++L  L++D     A+ +  G  
Sbjct: 254 FAPTLIDALKNTLEKFFGENPKESK-DLSRIVNSHHFQRLSRLLDDP--SVADKIVHG-- 308

Query: 404 GHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEI 434
                G  D+   Y  PT++++      +M EEI
Sbjct: 309 -----GERDEKNLYIEPTILLDPPLDSSIMTEEI 337

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  141 bits (356), Expect = 4e-37
 Identities = 111/380 (29%), Positives = 169/380 (44%), Gaps = 30/380 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
           P   + +        AEVD  VA AR A K  W K +  +R   L  +   I    +   
Sbjct: 21  PVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFL 80

Query: 130 EISSRDTGKTMVDASLGEI-------MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKA 182
                DTGK    AS  +I           + +    +E  +   P+ + +    + K  
Sbjct: 81  AAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRK-- 138

Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
                PLGVVG I  WN P   +   +  A+  GN +V+K SE    +      ++ A  
Sbjct: 139 -----PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA-- 191

Query: 243 AAVGAPENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
             VG P+ + +V+ GF     GE L     VD I F G    G  IM+ A+  + PV+ E
Sbjct: 192 --VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFE 249

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK+A IV  D D        +R+A  ++GQ C G ER YV R I+  FV+ +    +S
Sbjct: 250 LGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAES 309

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFG-HLSEGAVDQY 414
           +  G P     +MG L   EH +K+ +    A+++GA ++  G    FG  L+ GA   +
Sbjct: 310 LKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA---W 366

Query: 415 FPPTVIVNVNHTMKLMQEEI 434
             PT+   +  + +++ EEI
Sbjct: 367 VQPTIWTGLPDSARVVTEEI 386

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  136 bits (345), Expect = 2e-35
 Identities = 101/391 (25%), Positives = 171/391 (43%), Gaps = 32/391 (8%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
               V    PA  + +      +  + +  +  A++A K W      +R + +R +   +
Sbjct: 10  GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69

Query: 122 IEHQELICEISSRDTGKTMVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
            + +E + ++ S + GK + +  LGE+   +  C+    L  +      P  R  G  M+
Sbjct: 70  RKKKEALGKLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERP-GHRMM 127

Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFR 236
            +     ++PLGVVG I ++N+P   ++  N  +A V  GN +V K S     +     +
Sbjct: 128 EQ-----WNPLGVVGVITAFNFPV-AVWGWNAAIALV-CGNVVVWKPSPTTPLTAIAVTK 180

Query: 237 IIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 294
           I+   L   G P  +  ++ G A+ GEALV    V  + F GS  VGR + +  +     
Sbjct: 181 IVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGR 240

Query: 295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 354
             LELGG +A IV +D D+    +  + AA+ ++GQ C    R  VH  IY   + ++ K
Sbjct: 241 SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK 300

Query: 355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK----GAEILARGSFGHLSEGA 410
             K V  G PL     +G L    H++   +    A+++    G  +L    FG      
Sbjct: 301 AYKQVRIGDPLDDGTLVGPL----HTKAAVDNYLAAIEEAKSQGGTVL----FGGKVIDG 352

Query: 411 VDQYFPPTVIVNVNHTMKLMQEEI---ILWV 438
              Y  PT IV       +++EE    IL+V
Sbjct: 353 PGNYVEPT-IVEGLSDAPIVKEETFAPILYV 382

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  135 bits (341), Expect = 4e-35
 Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           LGV+ AI  +N+P + + + +  A+ + N +V+K SE    S   Y   I   L   G P
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS-ALYLADI---LYEAGLP 195

Query: 249 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
             ++ V+TG   E  + L+++  VD + F G   +G+ I   A        LELGG D  
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPL 253

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           IV +D D+   A +AV+ + ++SGQ C   +R  V   +   F   + +  ++   G P+
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
               DMG +     +   +  VN+A+ +GA +L     G++ +GA+   + PTV+  V+ 
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLL----GNVRDGAL---YAPTVLDRVDP 366

Query: 426 TMKLMQEE 433
           +M L++EE
Sbjct: 367 SMTLVREE 374

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 7e-35
 Identities = 105/404 (25%), Positives = 173/404 (42%), Gaps = 56/404 (13%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G    +E K+    PA   + +G     ++   ++ +  A +A + W K S + R    R
Sbjct: 43  GERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRA---R 99

Query: 116 ILLK---YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
           ILL+    I   +        ++ GK   +A   +   T E I +L          EY  
Sbjct: 100 ILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-AD---TAEAIDFL----------EY-- 143

Query: 173 SGRSMIHKKAKVE------------FHPLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGI 219
             R M+                   + PLGV   I  WN+PF  I   M LAA+ +GN +
Sbjct: 144 YARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPF-AIMAGMTLAAIVAGNTV 202

Query: 220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVG 276
           ++K + +       +  +++ A    G P  +V+ + G  +E G+ LV       I F G
Sbjct: 203 LLKPASDTPVIAAKFVEVLEEA----GLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTG 258

Query: 277 SPGVGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 330
           S  VG  I   A+K       L  V  E+GGKDA +V +D D+   A+  V +A   SGQ
Sbjct: 259 SREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQ 318

Query: 331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 390
            C+   R  VH D+Y   + +V ++ K ++ G P    Y MG +     ++   + +   
Sbjct: 319 KCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAY-MGPVI----NQASFDKIMSY 373

Query: 391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++ G E   R   G   + +   +  PT+  +V+   ++MQEEI
Sbjct: 374 IEIGKE-EGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEI 416

Length = 514

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 7e-35
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 17/367 (4%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + L   P     +++  +  A    + W +++   R Q LR + K +    E + +
Sbjct: 14  PATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQ 73

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + +R+ GK +  A   E+  +     W    G   LK E       + +++A +E+ PLG
Sbjct: 74  MITREMGKPINQAR-AEVAKSANLCDWYAEHGPAMLKAE----PTLVENQQAVIEYRPLG 128

Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
            + AI+ WN+P   +    +  + +GNG ++K + N    GC   ++I       G P+ 
Sbjct: 129 TILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVM--GCA--QLIAQVFKDAGIPQG 184

Query: 251 LVDVITGFAETGEALVSSVDKIIFV---GSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 307
           +   +      G + + +  +I  V   GS   G  I   A   L    LELGG D FIV
Sbjct: 185 VYGWLNA-DNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243

Query: 308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367
            +D D+    + AV    Q++GQ CA A+RF +   I + F  +      ++  G P   
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDE 303

Query: 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 427
           +  +G +   +  ++L + V   L +GA +L     G    GA + Y+ PTV+ NV   M
Sbjct: 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLG---GEKIAGAGN-YYAPTVLANVTPEM 359

Query: 428 KLMQEEI 434
              +EE+
Sbjct: 360 TAFREEL 366

Length = 462

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 5e-32
 Identities = 100/375 (26%), Positives = 167/375 (44%), Gaps = 27/375 (7%)

Query: 70  EPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127
           +P T   L         ++D  V+ AR    +  W+ SS  +R+  L  L   +  H E 
Sbjct: 41  DPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100

Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + DTGK +  +   +I      I W     +K +  E  ++     H+ A +   
Sbjct: 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDK-VYGEVATTSS---HELAMIVRE 156

Query: 188 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
           P+GV+ AIV WN+P         P LAA   GN +++K SE +  S      + + A   
Sbjct: 157 PVGVIAAIVPWNFPLLLTCWKLGPALAA---GNSVILKPSEKSPLSAIRLAGLAKEA--- 210

Query: 245 VGAPENLVDVITGFA-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 300
            G P+ +++V+TGF  E G+AL   + +D I F GS   G+ ++++A  + +  V LE G
Sbjct: 211 -GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAG 269

Query: 301 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GK A IV  D  D+   A         + GQ C    R  +   I   F++ + +  ++ 
Sbjct: 270 GKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G PL     MG L    H++ + + + +   KG  +L   + G  +         PT+
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAA------AIGPTI 383

Query: 420 IVNVNHTMKLMQEEI 434
            V+V+    L +EEI
Sbjct: 384 FVDVDPNASLSREEI 398

Length = 494

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  126 bits (317), Expect = 8e-32
 Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 22/375 (5%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           PAT + LG     + A++D  +A AR+A  +  W++ +   R + LR L   +  H E +
Sbjct: 22  PATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT-ALRVRCLRQLRDALRAHVEEL 80

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL--LSEGEKWLKPEYRSSGRSMIHKKAKVEF 186
            E++  + G   +  +  ++    + + +   L+E   W   +   +    I  +  +  
Sbjct: 81  RELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW-TTDLGVASPMGIPTRRTLRR 139

Query: 187 HPLGVVGAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
             +GVVGAI  WN+P H I      P LAA   GN +V+K + +  W       +I    
Sbjct: 140 EAVGVVGAITPWNFP-HQINLAKLGPALAA---GNTVVLKPAPDTPWCAAVLGELIAEH- 194

Query: 243 AAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
                P  +V+++T       AL++    VD + F GS   GR +M +A+ TL  V LEL
Sbjct: 195 --TDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLEL 252

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK AFIV DD D+     +A       +GQ CA   R  V R  Y   V+  A  + S+
Sbjct: 253 GGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSI 312

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G P       G +      +++Q+ ++ A+ +G      G  G  ++     +  PTV
Sbjct: 313 KPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG--GRPADRDRGFFVEPTV 370

Query: 420 IVNVNHTMKLMQEEI 434
           I  +++  ++ +EEI
Sbjct: 371 IAGLDNNARVAREEI 385

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  126 bits (317), Expect = 1e-31
 Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 48/386 (12%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI 128
           P     +      +  +VD  VA A++A +   W K + + R + +  L   + EHQE +
Sbjct: 28  PTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEEL 87

Query: 129 CEISSRDTG-------KTMVDASLGEIMTT------CEKITWLLSEGEKWLKPEYRSSGR 175
             I S D+G       KT V  S   I T       C+KI     +G+     + R +  
Sbjct: 88  ATIESLDSGAVYTLALKTHVGMS---IQTFRYFAGWCDKI-----QGKTIPINQARPNRN 139

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
             + K+      P+GV G ++ WNYP   +   M A + +GN +V+K ++    +   + 
Sbjct: 140 LTLTKR-----EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF- 193

Query: 236 RIIQAALAA-VGAPENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRNASKT 291
               A L    G P+ +++++ G     G+ L    D  K+ F GS  +G+ IM++ + +
Sbjct: 194 ----AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVS 249

Query: 292 -LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 350
            L  V+LELGGK   I+  D D+    ++ + +   + G+NC  A R +V   I+  FV 
Sbjct: 250 NLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVR 309

Query: 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 410
           +V + VK +  G PL    D G      H +KL       + +GA ++  G         
Sbjct: 310 RVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK-------Q 362

Query: 411 VDQ---YFPPTVIVNVNHTMKLMQEE 433
           VD+   +F PTV  +V   M + +EE
Sbjct: 363 VDRPGFFFEPTVFTDVEDHMFIAKEE 388

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  121 bits (305), Expect = 3e-30
 Identities = 103/378 (27%), Positives = 163/378 (43%), Gaps = 32/378 (8%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           Y PAT + +      S  +VD  V  A  A   W +++ K R + L  L   I E+ ++ 
Sbjct: 21  YNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWL---------LSEGEKWLKPEYRSSGRSMIH 179
            E+ SR+ GK +      EI    +   +          L+ GE      Y     SMI 
Sbjct: 81  AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE------YLEGHTSMIR 134

Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
           +       PLGVV +I  WNYP       +  A+ +GN +V+K SE    +         
Sbjct: 135 RD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-LKL---- 183

Query: 240 AALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
           A LA    P  +V+++ G  +T G+ L     V  +   GS   G  I+ + + ++    
Sbjct: 184 AELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTH 243

Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
           +ELGGK   IV DD D+  V +        ++GQ+C  A R Y  R IY   V ++   V
Sbjct: 244 MELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303

Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
            ++ +G P     ++G L  L H E++   V +A   G   +  G  G   +G    YF 
Sbjct: 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITG--GEKRKGN-GYYFA 360

Query: 417 PTVIVNVNHTMKLMQEEI 434
           PT++        ++Q+E+
Sbjct: 361 PTLLAGAKQDDAIVQKEV 378

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  121 bits (304), Expect = 7e-30
 Identities = 98/390 (25%), Positives = 166/390 (42%), Gaps = 27/390 (6%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G   ++E K+    P    + +G     S+   +  +  A KA + W K+  ++R   L 
Sbjct: 39  GERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILF 98

Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
                +   +     +  ++ GK   +A         E I ++     + ++        
Sbjct: 99  KAAAIVRRRRHEFSALLVKEVGKPWNEAD----AEVAEAIDFMEYYARQMIELAKGKPVN 154

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
           S   +  +  + P GV   I  WN+PF  +    +A + +GN +V+K +E A      + 
Sbjct: 155 SREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV 214

Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT- 291
            I++ A    G P+ +V  + G  +E G+ LV       I F GS  VG  I   A+K  
Sbjct: 215 EILEEA----GLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQ 270

Query: 292 -----LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
                L  V  E+GGKD  IV +D D+   AQ A  +A   +GQ C+   R  VH  +Y 
Sbjct: 271 PGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYD 330

Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE--ILARGSFG 404
             V +  +I +S+  GPP +    +G +      +K  N + + ++ G     L  G  G
Sbjct: 331 EVVERFVEITESLKVGPPDSADVYVGPVI----DQKSFNKIMEYIEIGKAEGRLVSGGCG 386

Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
             S+G    +  PT+  +V+   +L QEEI
Sbjct: 387 DDSKG---YFIGPTIFADVDRKARLAQEEI 413

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 4e-29
 Identities = 104/385 (27%), Positives = 168/385 (43%), Gaps = 27/385 (7%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
           RT  S   V    P+T K      A ++ EV++ +  A+ AQK WAK+   +R + L   
Sbjct: 25  RTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKA 84

Query: 118 LKYIIEHQELICEISSRDTGKTMVDA------SLGEIMTTCEKITWLLSEGEKWLKPEYR 171
              + EH+  I E   ++  K   DA      S   I  T E+   +L EG+  +   + 
Sbjct: 85  AAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFP 144

Query: 172 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 231
            + R+     +K+   PLGVV AI  +NYP +   + +  A+ +GN +V+K     + + 
Sbjct: 145 GNERNKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAA 201

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288
                ++     A G P+ L+  +TG  +E G+ L     V+ I F G    G  I + A
Sbjct: 202 ---LHMVHCFHLA-GFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGD-TGIAISKKA 256

Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
              + P+ +ELGGKDA IV +D D+   A   ++     SGQ C   +   V   +    
Sbjct: 257 G--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADAL 314

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
           V +V   V  ++ GPP     D+  +     +  ++ LV DA +KGA             
Sbjct: 315 VEKVNAKVAKLTVGPP-EDDCDITPVVSESSANFIEGLVMDAKEKGATF-------CQEW 366

Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEE 433
                   P ++ NV   M++  EE
Sbjct: 367 KREGNLIWPLLLDNVRPDMRIAWEE 391

Length = 496

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  115 bits (289), Expect = 5e-28
 Identities = 88/386 (22%), Positives = 145/386 (37%), Gaps = 29/386 (7%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
            E  V     A  + +G      +AE +  +  A  A K W     + R + L      +
Sbjct: 31  KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLL 90

Query: 122 IEHQELICEISSRDTGKTMVDAS--LGEIMTTCE--KITWLLSEGEKWLKPEYRSSGRSM 177
              +  +    + + GK  V+A   + E +          L           Y       
Sbjct: 91  RRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNES 150

Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
            +         LG    I  WN+P       ++A V  GN ++ K +E+A   G   F I
Sbjct: 151 FYV-------GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEI 203

Query: 238 IQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK---- 290
              A    G P  +V  + G  E  G  L     +  I F GS   G+ I   A++    
Sbjct: 204 FHEA----GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPG 259

Query: 291 --TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
                 + +E GGK+A IV +  D   V +  V +A    GQ C+ A R  + +  Y   
Sbjct: 260 QTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPV 319

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
           + ++ K  + +S GPP     D+G +   E   K+ + +    ++G +++  G      E
Sbjct: 320 LERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK---RLE 375

Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G    +  PTV+  V    ++ QEEI
Sbjct: 376 G-EGYFVAPTVVEEVPPKARIAQEEI 400

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  113 bits (285), Expect = 2e-27
 Identities = 102/386 (26%), Positives = 158/386 (40%), Gaps = 33/386 (8%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY- 120
           S T +    PAT +        S  EVD  VA AR+    W ++S  QR     +LL+Y 
Sbjct: 14  SGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTS---VLLRYQ 70

Query: 121 --IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
             + EH++ I E+ + + GKT  DA LG++    E +                     + 
Sbjct: 71  ALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVD 129

Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
               +    PLGV   I  +N+P          A+  GN  V+K SE    +      + 
Sbjct: 130 VYSIR---QPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELF 186

Query: 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
             A    GAP+ +++V+ G  E  + L+    V  + FVGS  +GR I    S     V 
Sbjct: 187 SEA----GAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQ 242

Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
              G K+  +V  D D    A   V AA  ++GQ C             A+ V    + V
Sbjct: 243 ALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS--------AAVLVGAADEWV 294

Query: 357 -------KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
                  + +  GP      +MG L   +  +++ +L+     +GAE+L  G  G+  +G
Sbjct: 295 PEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR-GYKVDG 353

Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEI 434
             +  +  PT++  V  TMK  QEEI
Sbjct: 354 YEEGNWVGPTLLERVPPTMKAYQEEI 379

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score =  113 bits (285), Expect = 2e-27
 Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 20/306 (6%)

Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
           D GK  +++S+ E+      I   L + + W+ PE   +  +     A++   PLGVV  
Sbjct: 59  DLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLV 118

Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
           I +WNYPF    +P++ A+ +GN +V+K SE A  S     ++++  L +     + V V
Sbjct: 119 ISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDS-----SAVRV 173

Query: 255 ITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
           + G   ET   L    DKI + GS  +GR+IM  A+K LTPV LELGGK   +V  D D+
Sbjct: 174 VEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDL 233

Query: 314 P-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372
              V +I       ++GQ C   +     ++     +  + K +++     P+  K DM 
Sbjct: 234 KVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESK-DMS 292

Query: 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKL 429
            +    H ++L  L+++      E+  +  +G    G  D+      PT++++V     +
Sbjct: 293 RIVNSTHFDRLSKLLDE-----KEVSDKIVYG----GEKDRENLKIAPTILLDVPLDSLI 343

Query: 430 MQEEII 435
           M EEI 
Sbjct: 344 MSEEIF 349

Length = 484

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  106 bits (268), Expect = 5e-25
 Identities = 93/423 (21%), Positives = 162/423 (38%), Gaps = 44/423 (10%)

Query: 19  FLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG 78
           F+  +    VP   +  +    D  +      I       T   E           + +G
Sbjct: 5   FVNRIFDLEVPLEALADALKAFDEKEWEAIPII---NGEETETGEGAPVIDPADHERTIG 61

Query: 79  YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ-ELICEISSRDTG 137
                   +VD  +A A  A   W+ +  ++R + L      +  ++ ELI  +++ + G
Sbjct: 62  EVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIA-LAAAEAG 120

Query: 138 KTMVDASLGEIMTTCEKITWL-----LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVV 192
           KT+ DA   E+    E I +       +            +G     +   +E H  GV 
Sbjct: 121 KTLADA-DAEVR---EAIDFCRYYAAQARELFSDPELPGPTG-----ELNGLELHGRGVF 171

Query: 193 GAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 251
             I  WN+P   IF   + AA+ +GN ++ K +E          R ++    A G P ++
Sbjct: 172 VCISPWNFPL-AIFTGQIAAALAAGNTVIAKPAEQTPLIAA---RAVELLHEA-GVPRDV 226

Query: 252 VDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMR---NASKTLTPVTLELGGKDAF 305
           + ++ G   E GEALV+   +D +IF GS    ++I R        + P+  E GGK+A 
Sbjct: 227 LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAM 286

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           IV          +  V++A  S+GQ C+     Y+  +I   F+  +   + S+  G P 
Sbjct: 287 IVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPW 346

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ----YFPPTVIV 421
               D+G L      + L+             L RG    ++   +D     +  P +I 
Sbjct: 347 DLSTDVGPLIDKPAGKLLRAHTE---------LMRGEAWLIAPAPLDDGNGYFVAPGIIE 397

Query: 422 NVN 424
            V 
Sbjct: 398 IVG 400

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  101 bits (253), Expect = 4e-23
 Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 38/330 (11%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK------T 139
           A+VD  V  AR A   WA+ SF++R+  +      + E++E + E+ +R+TGK      T
Sbjct: 37  AQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT 96

Query: 140 MVDASLGEI---MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
            V A + +I   +    + T     GEK            M    A +   P GVV    
Sbjct: 97  EVTAMINKIAISIQAYHERT-----GEK---------RSEMADGAAVLRHRPHGVVAVFG 142

Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
            +N+P H     ++ A+ +GN +V K SE   W      ++ Q A    G P  +++++ 
Sbjct: 143 PYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA----GLPAGVLNLVQ 198

Query: 257 GFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDV 313
           G  ETG+AL +   +D ++F GS   G ++ R  A +    + LE+GG +  ++ +  D+
Sbjct: 199 GGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258

Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYD-- 370
                + +++A  S+GQ C  A R  V +      F++++  + K ++ G   A   +  
Sbjct: 259 DAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDA---EPQ 315

Query: 371 --MGALCLLEHSEKLQNLVNDALDKGAEIL 398
             MGA+   + ++ L       L  G + L
Sbjct: 316 PFMGAVISEQAAQGLVAAQAQLLALGGKSL 345

Length = 487

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 94.8 bits (236), Expect = 5e-21
 Identities = 100/405 (24%), Positives = 173/405 (42%), Gaps = 60/405 (14%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           +I  + R  Q E+      PAT + L    A S A+V+  VA AR A   WA+ S ++R 
Sbjct: 2   FIDGKWRAGQGES-FSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI 60

Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
             ++     + E +E +  + +R+TGK + +    E+ +   K+   +S     +K  + 
Sbjct: 61  AVVQRFAALLEERKEALARVIARETGKPLWET-RTEVASMIGKVA--IS-----IKAYHE 112

Query: 172 SSGRS---MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
            +G S   M   +A +   P GVV     +N+P H     ++ A+ +GN +V K SE   
Sbjct: 113 RTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172

Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286
           W      ++ + A    G P  +++++ G  ETG AL +   +D ++F GS   G ++ R
Sbjct: 173 WVAEETVKLWEKA----GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228

Query: 287 NAS----KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
             +    K L    LE+GG +  IV +  D+     + +++A  S+GQ C  A R  V  
Sbjct: 229 QFAGRPEKILA---LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPD 285

Query: 343 D-----IYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDAL 391
                   A  V    ++           G +D      MGA+  L+ +++L       L
Sbjct: 286 GAQGDAFLARLVEVAERLT---------VGAWDAEPQPFMGAVISLQAAQRLLAAQAKLL 336

Query: 392 DKGAEILAR-----GSFGHLSEGAVD----------QYFPPTVIV 421
             G + L            L+ G +D          ++F P + V
Sbjct: 337 ALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQV 381

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 93.4 bits (232), Expect = 2e-20
 Identities = 89/349 (25%), Positives = 157/349 (44%), Gaps = 20/349 (5%)

Query: 98  AQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKI 155
           A K+W +    +R + +R +   +    + +  + S + GK + +    + EI+  C+  
Sbjct: 68  AAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFA 127

Query: 156 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-FNPMLAAVF 214
             L  +    + P  R +     H   +V ++PLG+VG I ++N+P   + +N  +A V 
Sbjct: 128 VGLSRQLNGSIIPSERPN-----HMMMEV-WNPLGIVGVITAFNFPCAVLGWNACIALV- 180

Query: 215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV--SSVDKI 272
            GN +V K +           +++   L     P  +     G AE GEA+   + +  +
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240

Query: 273 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 332
            F GS  VG M+ +  +       LEL G +A IV DD D+    +  + AA+ ++GQ C
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300

Query: 333 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
               R  +H  IY   + Q+  + K V  G PL     +G L   E  +  +  +     
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360

Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI---ILWV 438
           +G +IL  GS    SEG    +  PT IV ++    +++EE+   +L+V
Sbjct: 361 QGGKILTGGSAIE-SEG---NFVQPT-IVEISPDADVVKEELFGPVLYV 404

Length = 508

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 89.2 bits (222), Expect = 4e-19
 Identities = 105/407 (25%), Positives = 173/407 (42%), Gaps = 62/407 (15%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQ-FLRI 116
           RT  +  +V  ++ A    L  +     A V++ +  A +A+K WA+  F+ R   FL+ 
Sbjct: 43  RTGNTGKQVMPHDHA--HVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKA 100

Query: 117 --LL--KYIIEHQELICEISSRDT---------GKTMVDASLGEIMTTCEKITWL---LS 160
             LL  KY             R           GK +  A   EI   CE I +L   + 
Sbjct: 101 ADLLSGKY-------------RYELNAATMLGQGKNVWQA---EIDAACELIDFLRFNVK 144

Query: 161 EGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI-FNPMLAAVFSGNG 218
             E+    +  SS   + ++   +E+ PL G V A+  +N  F  I  N   A    GN 
Sbjct: 145 YAEELYAQQPLSSPAGVWNR---LEYRPLEGFVYAVSPFN--FTAIGGNLAGAPALMGNV 199

Query: 219 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFV 275
           ++ K S+ A  S    ++I++ A    G P  +++ + G     G+ +++S     + F 
Sbjct: 200 VLWKPSDTAVLSNYLVYKILEEA----GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255

Query: 276 GSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
           GS    + + +         +T   +  E GGK+  +V    DV  +    VR A +  G
Sbjct: 256 GSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQG 315

Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389
           Q C+ A R YV   ++     ++ + +K +  G P      MGA+   +  ++++  ++ 
Sbjct: 316 QKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDH 375

Query: 390 A-LDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
           A  D  AEI+A G     S G    YF  PTVI   +   KLM EEI
Sbjct: 376 AKSDPEAEIIAGGKCDD-SVG----YFVEPTVIETTDPKHKLMTEEI 417

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 84.8 bits (210), Expect = 8e-18
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 13/249 (5%)

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GVV AI ++N+P + I + +  A+ +G  +++K +     S   +  ++  A    G 
Sbjct: 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GL 179

Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
           PE     +       E LV+   V    F+GS  VG M+    +   T   LE GG    
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           IV    D+  +    V+     +GQ C   +R +V  +I   F  ++A   + +  G P 
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
               ++G L      ++++  VN+A+  GA +L  G    LS    D  + PTV+++   
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK--RLS----DTTYAPTVLLDPPR 352

Query: 426 TMKLMQEEI 434
             K+  +EI
Sbjct: 353 DAKVSTQEI 361

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 80.0 bits (197), Expect = 4e-16
 Identities = 71/318 (22%), Positives = 125/318 (39%), Gaps = 26/318 (8%)

Query: 77  LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 136
           +G     + A V   +  A++A   W  +  K+R   L  L   +  H   +  +  R+ 
Sbjct: 65  VGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREA 124

Query: 137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 196
           GKT+ +A    I    E + +             R   + +     +      GV   I 
Sbjct: 125 GKTIHNA----IAEVREAVDFC------------RYYAKQVRDVLGEFSVESRGVFVCIS 168

Query: 197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 256
            WN+P       + AA+ +GN ++ K +E  S        ++Q A    G P   + ++ 
Sbjct: 169 PWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA----GFPAGTIQLLP 224

Query: 257 GFAET-GEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDD 310
           G     G AL S   +  + F GS  V ++I +  A +   PV L  E GG++A IV   
Sbjct: 225 GRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDST 284

Query: 311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 370
                V +  +R+A  S+GQ C+      V  D+    ++ +   ++ +  G P     D
Sbjct: 285 ALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTD 344

Query: 371 MGALCLLEHSEKLQNLVN 388
           +G +   E  + L   + 
Sbjct: 345 VGPVIDAEAKQNLLAHIE 362

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 77.1 bits (190), Expect = 4e-15
 Identities = 65/273 (23%), Positives = 113/273 (41%), Gaps = 26/273 (9%)

Query: 78  GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 137
           G     + A+V++ +  A  A  +W+ +   +R   L      +      +  +  R+ G
Sbjct: 142 GTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAG 201

Query: 138 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
           KT+ +A    I    E + +L     ++   + R            +   PLG V  I  
Sbjct: 202 KTLSNA----IAEVREAVDFL-----RYYAGQAR-------DTFGNLTHRPLGPVVCISP 245

Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
           WN+P       + AA+ +GN ++ K +E          R++  A    G P  ++ ++ G
Sbjct: 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA----GVPPGVLQLLPG 301

Query: 258 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGGKDAFIVCDDV 311
             ET G AL +   V  ++F GS  V R+I R  A +   P+ L  E GG++A IV    
Sbjct: 302 RGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA 361

Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
               V    + +A  S+GQ C+      +  D+
Sbjct: 362 LAEQVVADVLASAFDSAGQRCSALRVLCLQEDV 394

Length = 769

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 74.8 bits (183), Expect = 3e-14
 Identities = 91/386 (23%), Positives = 160/386 (41%), Gaps = 31/386 (8%)

Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           QS + +    PAT + +   P  +  E    V+ A++A  +W  +    R+   R++LK+
Sbjct: 126 QSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQ---RVMLKF 182

Query: 121 IIEHQELICEISSR-------DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173
               QELI +   +       + GKT+ D S G+I    E +          +  EY  +
Sbjct: 183 ----QELIRKNMDKLAMNITTEQGKTLKD-SHGDIFRGLEVVEHACGMATLQMG-EYLPN 236

Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233
             + +   +  E  PLGV   I  +N+P          AV  GN  ++K SE    +   
Sbjct: 237 VSNGVDTYSIRE--PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS-- 292

Query: 234 YFRIIQAALA-AVGAPENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASK 290
              +I A LA   G P+ +++++ G  +T  A+    D   + FVGS   G  I   A+ 
Sbjct: 293 ---VILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349

Query: 291 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER--FYVHRDIYALF 348
               +   +G K+  +V  D ++       + A   ++GQ C       F      +   
Sbjct: 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDK 409

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
           + + AK +K      P A   D+G +   +  E++  L+   +D GA++L  G    +  
Sbjct: 410 LVERAKALKVTCGSEPDA---DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPG 466

Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEI 434
                +  PT++  V   M+  +EEI
Sbjct: 467 YEKGNFIGPTILSGVTPDMECYKEEI 492

Length = 604

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 73.0 bits (179), Expect = 5e-14
 Identities = 51/256 (19%), Positives = 94/256 (36%), Gaps = 17/256 (6%)

Query: 95  ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
           A  + K   + +  +R  FL  +++ +      I   +   TGK         I     +
Sbjct: 8   ADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKG--WMFAENICGDQVQ 65

Query: 155 ITWLLSEGEKWLKP----EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210
           +         +  P     +   G      ++     P G V  I ++N+P       + 
Sbjct: 66  LRARAFVIYSYRIPHEPGNHLGQGLKQ---QSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122

Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--S 268
            A+  GN +++K     S       R++  A      P   V +I G  +T +AL+   +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGL---LPPEDVTLINGDGKTMQALLLHPN 179

Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQS 327
              ++F GS  V   +  +A +    + LEL G +  ++  D   V +VA   V+     
Sbjct: 180 PKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237

Query: 328 SGQNCAGAERFYVHRD 343
           SGQ C      +V  +
Sbjct: 238 SGQKCTAQSMLFVPEN 253

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like

 Score = 70.7 bits (174), Expect = 3e-13
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 18/211 (8%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
           A VD+ VA A+ AQK + K +   R + +  + + ++ + E + E++  +TG   V+  +
Sbjct: 4   ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI 63

Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
            +     EK     + G + L     S    +      VE+ P GV+GAI     P   I
Sbjct: 64  AKNHLAAEK-----TPGTEDLTTTAWSGDNGL----TLVEYAPFGVIGAITPSTNPTETI 114

Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
            N    MLAA   GN +V      A     +   +I  A+A  G P+NLV  +     ET
Sbjct: 115 INNSISMLAA---GNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIET 171

Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
              L++   ++ ++  G P V +  + +  K
Sbjct: 172 TNELMAHPDINLLVVTGGPAVVKAALSSGKK 202

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 69.8 bits (171), Expect = 9e-13
 Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 25/266 (9%)

Query: 183 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           + E+ PL G V AI  +N  F  I  N   A    GN ++ K S+ A  S     RI++ 
Sbjct: 163 RTEYRPLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220

Query: 241 ALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGV----GRMIMRNASK--T 291
           A    G P  +++ + G      + +++  D   I F GS        + + +N  +   
Sbjct: 221 A----GLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHN 276

Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
              +  E GGKD  +V    DV HV    +R A +  GQ C+   R YV   ++  F  +
Sbjct: 277 FPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGR 336

Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA--EILARGSFGHLSEG 409
           +   +  V  G P      MGA+   +   K+   +  A    +   ILA G +   S G
Sbjct: 337 LLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDD-SVG 395

Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEI 434
               YF  PTV+ + +    LM+EEI
Sbjct: 396 ----YFVEPTVVESKDPQEPLMKEEI 417

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 70.2 bits (173), Expect = 9e-13
 Identities = 85/368 (23%), Positives = 147/368 (39%), Gaps = 66/368 (17%)

Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
              +V++ +A AR A   W+++  ++R   L      +  ++  +  +  R+ GKT+ DA
Sbjct: 583 DAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDA 642

Query: 144 SLGEIMTTCEKITW----------LLSEGEKWLKP-----EYRSSGRSMIHKKAKVEFHP 188
            + E+    E + +          L    EK   P     E R  GR             
Sbjct: 643 -IAEVR---EAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGR------------- 685

Query: 189 LGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
            GV   I  WN+P   IF   + AA+ +GN ++ K +E            ++    A G 
Sbjct: 686 -GVFVCISPWNFPL-AIFLGQVAAALAAGNTVIAKPAEQTPLIA---AEAVKLLHEA-GI 739

Query: 248 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 301
           P++++ ++ G  A  G AL +   +  + F GS    R+I R  A++    V L  E GG
Sbjct: 740 PKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGG 799

Query: 302 KDAFI---------VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
           ++A I         V DDV         V +A +S+GQ C+     +V  DI    +  +
Sbjct: 800 QNAMIVDSTALPEQVVDDV---------VTSAFRSAGQRCSALRVLFVQEDIADRVIEML 850

Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
              +  +  G P     D+G +   E    L   + + + + A +LA+      +E    
Sbjct: 851 KGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI-ERMKREARLLAQLPLPAGTENG-- 907

Query: 413 QYFPPTVI 420
            +  PT  
Sbjct: 908 HFVAPTAF 915

Length = 1038

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 69.9 bits (172), Expect = 1e-12
 Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 48/278 (17%)

Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
           S  +V+  +A A+ A   W+ +   +R   L      +  H   +  ++ R+ GKT+ +A
Sbjct: 588 SAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANA 647

Query: 144 SLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
            + E+    E + +L    ++  + L                     PLG V  I  WN+
Sbjct: 648 -IAEVR---EAVDFLRYYAAQARRLLNGPGHK---------------PLGPVVCISPWNF 688

Query: 201 PFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALA-----AVGAPENLVDV 254
           P   IF   +AA   +GN ++ K +E           +I AA A       G P++ + +
Sbjct: 689 PL-AIFTGQIAAALVAGNTVLAKPAEQTP--------LI-AARAVRLLHEAGVPKDALQL 738

Query: 255 ITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT-PVTL--ELGGKDAFIVC 308
           + G   T G ALV+   +  ++F GS  V R+I R  +K    PV L  E GG++A IV 
Sbjct: 739 LPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIV- 797

Query: 309 DDVDVP-HVAQIAVRAALQSSGQNCAGAER-FYVHRDI 344
           D   +P  V    + +A  S+GQ C+ A R   +  D+
Sbjct: 798 DSSALPEQVVADVIASAFDSAGQRCS-ALRVLCLQEDV 834

Length = 1208

>gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
           A VD+ VA A+ AQ+ + + S   R++ +  + + ++ H E + E++  +TG   V+  +
Sbjct: 36  ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95

Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
            + +   EK     + G + L  E  +    +      +E+ P GV+GA+     P   I
Sbjct: 96  AKNVAAAEK-----TPGVEDLTTEALTGDNGL----TLIEYAPFGVIGAVTPSTNPTETI 146

Query: 206 FN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAET 261
            N    MLAA   GN +V      A         ++  A+ A G PENLV  +     ET
Sbjct: 147 INNAISMLAA---GNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIET 203

Query: 262 GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
            + L+    +  ++  G P V +  M++  K
Sbjct: 204 AQRLMKHPGIALLVVTGGPAVVKAAMKSGKK 234

Length = 465

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 61.0 bits (148), Expect = 6e-10
 Identities = 80/358 (22%), Positives = 135/358 (37%), Gaps = 43/358 (12%)

Query: 87  EVDERVAQAR-KAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----- 140
           +V   VA AR          +F +R + L+ L +Y+ E +E +  +++  TG T      
Sbjct: 37  DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYALAA-TTGATRRDNWV 95

Query: 141 -VDASLGEIMTTCEKITWLLSEGEKWLKPEY-----RSS--GRSMIHKKAKVEFHPLGVV 192
            +D  +G + T        L +     + E+       S  GR ++  K  V        
Sbjct: 96  DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQ----- 150

Query: 193 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENL 251
             I ++N+P   +      A  +G   + K  +  A  +      ++++ L     PE  
Sbjct: 151 --INAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLL----PEGS 204

Query: 252 VDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMR--NASKTLTPVTLELGGKDAFIV 307
           + +I G A  G+ L  +   D + F GS      +    N  +       E    +A I+
Sbjct: 205 LQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262

Query: 308 CDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
            +D   D P     A   VR     +GQ C    R  V + +    +  +   +  V  G
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
            P     DMG L  LE    ++  V   L  GAE+   G      +GA   +FPPT++
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGP--GRLDGA---FFPPTLL 375

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 57.3 bits (139), Expect = 1e-08
 Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 15/155 (9%)

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALAAVG 246
           PLG V  I  WN+P   IF   +AA   +GN ++ K +E          RI+  A    G
Sbjct: 768 PLGPVVCISPWNFPL-AIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA----G 822

Query: 247 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL------TPVTL 297
            P  +V ++ G  ET G ALV+   V  ++F GS  V R++ RN +  L       P+  
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIA 882

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 332
           E GG++A IV        V    + +A  S+GQ C
Sbjct: 883 ETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRC 917

Length = 1318

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 27/260 (10%)

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P G V  I  +N+P       ++ A+F GN  ++KV    S     + R+    L   G 
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGM 197

Query: 248 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
           P   VD+I     T   ++   +    +F GS  V     R A +    V LE  G D  
Sbjct: 198 PATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAE---RLALELHGKVKLEDAGFDWK 254

Query: 306 IVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKI-----VKS 358
           I+  DV DV +VA    + A   SGQ C+     + H + + A  + ++  +     ++ 
Sbjct: 255 ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS----FGHLSEGAVDQY 414
           ++ GP L   +      +L+H +KL  +    +  G + L   S    +G     AV   
Sbjct: 315 LTIGPVLT--WTTER--ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAV--- 367

Query: 415 FPPTVIVNVNHTMKLMQEEI 434
           F P   + +    +L+  E+
Sbjct: 368 FVPLEEIAIEENFELVTTEV 387

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 31/270 (11%)

Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD----- 142
           +D+ VA A+ AQ+  +  S +      R   +   + +  + +++  +TG   V+     
Sbjct: 1   LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIK 60

Query: 143 ---ASLGEIMTTC-EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
              A+         EK   +L+  E                    +   P+GVV +I   
Sbjct: 61  NHFAAEYIYNVYKDEKTCGVLTGDENGG---------------TLIIAEPIGVVASITPS 105

Query: 199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 258
             P   +    L ++ + N I+      A         ++  A  A GAPENL+  I   
Sbjct: 106 TNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP 165

Query: 259 A-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315
           + E  + L+    +  ++  G P V    ++ A  +  P      G    ++ +  D+  
Sbjct: 166 SIELAQRLMKFPGIGLLLATGGPAV----VKAAYSSGKPAIGVGAGNTPVVIDETADIKR 221

Query: 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
             Q  V++    +G  CA  +   V   +Y
Sbjct: 222 AVQSIVKSKTFDNGVICASEQSVIVVDSVY 251

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 45.2 bits (108), Expect = 5e-05
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 188 PLGVVGAIVSWNYPFHN-----IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
           P+GV+ A++    P  N     IF  ++A + + N I+      A        +I++ A 
Sbjct: 95  PVGVIAALI----PSTNPTSTAIFKALIA-LKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149

Query: 243 AAVGAPENLVDVIT 256
            A GAPE L+  I 
Sbjct: 150 VAAGAPEGLIQWIE 163

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 66/249 (26%), Positives = 92/249 (36%), Gaps = 61/249 (24%)

Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 146
           VD   A A  A + +   S  +R  FL  +   I    + +   +  +TG  + +A L G
Sbjct: 1   VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETG--LPEARLQG 58

Query: 147 EIMTTCEKITW---LLSEGEKWL-----------KPEYRSSGRSMIHKKAKVEFHPLGVV 192
           E+  T  ++     L+ EG  WL           +P  R   R M          PLG V
Sbjct: 59  ELGRTTGQLRLFADLVREGS-WLDARIDPADPDRQPLPRPDLRRM--------LVPLGPV 109

Query: 193 GAIVSWNYPFHNIFNPM-------LAAVFSGNGIVIK-------VSENASWSGCFYFRII 238
               + N+P    F+         LAA   G  +V+K        SE          R I
Sbjct: 110 AVFGASNFPL--AFSVAGGDTASALAA---GCPVVVKAHPAHPGTSE-------LVARAI 157

Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSSVDKII----FVGSPGVGRMIMRNASKTLT 293
           +AAL A G P  +  ++ G   E G ALV      I    F GS   GR +   A+    
Sbjct: 158 RAALRATGLPAGVFSLLQGGGREVGVALVK--HPAIKAVGFTGSRRGGRALFDAAAARPE 215

Query: 294 --PVTLELG 300
             P   ELG
Sbjct: 216 PIPFYAELG 224

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 11/184 (5%)

Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
           W KP+ ++    +   K +    P G+   I    +P  N +  + A++ +GN +++K  
Sbjct: 173 WEKPQGKNDPLKL---KKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH 229

Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE----ALVSSVDKIIFVGSPGV 280
             A        ++ +  L   G   NLV +             A   +V  I F GS   
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289

Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFY 339
           G+ + +NA +    V  E  G +  I+    D   + + +A   +L  SGQ C   +   
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAIL 346

Query: 340 VHRD 343
           V RD
Sbjct: 347 VPRD 350

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551

>gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 19/188 (10%)

Query: 165 WLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 222
           W KP+ +    +M     +  F   P GV   I    +P  N +  + A++ +GN +++K
Sbjct: 173 WEKPQGKHDPLAM-----EKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVK 227

Query: 223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-------SVDKIIFV 275
               A        ++ +  LA  G   NLV +    A+T E  ++        V  I F 
Sbjct: 228 PHPAAILPLAITVQVAREVLAEAGFDPNLVTLA---ADTPEEPIAQTLATRPEVRIIDFT 284

Query: 276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 335
           GS   G  +  NA +    V  E  G +  +V    D+  + +    +    SGQ C   
Sbjct: 285 GSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP 342

Query: 336 ERFYVHRD 343
           +  YV RD
Sbjct: 343 QNIYVPRD 350

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	439
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.95
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.84
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.61
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.5
KOG2449	157	consensus Methylmalonate semialdehyde dehydrogenas	98.44
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	97.59
PRK11809	1318	putA trifunctional transcriptional regulator/proli	96.35

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.3e-104  Score=748.34  Aligned_cols=430  Identities=65%  Similarity=1.044  Sum_probs=410.1

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHhhCCCC-------CCeeeeeCCCC--CCCCCCCCCCcccccCCcccCCCCCCeEEeecC
Q 013608            1 MAFLFSLIVLAFAYAICRFLLMLIPPN-------VPSIDVDASDV--LDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEP   71 (439)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~p~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P   71 (439)
                      |-+||.+.+++.+|+||+.++...++.       +.++..+-|+.  ++|++.+.         +-+.+++.++++||+|
T Consensus         1 ~~~~~~~~~~a~~~~i~~~~~~l~~p~~~s~~~~~~~~~~~~~~~~~n~~~~~~~---------~~~~~~~~~~vqCycP   71 (583)
T KOG2454|consen    1 MPFWWPLIVLAFAYAICKFLLMLIPPNVPSIDVDASDVLAHGKDTEENSFIYIPP---------RGRSQQSDKKVQCYCP   71 (583)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhhcCCCCCccccCHHHhccCCCchhhcCeeecCC---------CCCCcCCCCceEEecC
Confidence            458999999999999999886665554       44455555554  55665554         3345667889999999


Q ss_pred             CCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 013608           72 ATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT  151 (439)
Q Consensus        72 ~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~  151 (439)
                      +||+.++.+|.-++.|+|+.+..|++||++|.+.++..|++.|+.|.++|.+|+|.++++.|+|+||++.||++|||+.+
T Consensus        72 atg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvT  151 (583)
T KOG2454|consen   72 ATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVT  151 (583)
T ss_pred             CCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH
Q 013608          152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG  231 (439)
Q Consensus       152 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~  231 (439)
                      +|++.|..+++++||+|++||+++.+.++..+++|+|+||++.|+||||||||+++++++||++||++|+|.||++.||+
T Consensus       152 lEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~  231 (583)
T KOG2454|consen  152 LEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSG  231 (583)
T ss_pred             HHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeeh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC
Q 013608          232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD  309 (439)
Q Consensus       232 ~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~  309 (439)
                      ..+.++++.+|.++|.||++||+++|-++.+++|++  +++|++|+||+++++.|++.|+++++||++||||||++||++
T Consensus       232 ~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~d  311 (583)
T KOG2454|consen  232 CFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICD  311 (583)
T ss_pred             hhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEec
Confidence            999999999999999999999999999999999999  899999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 013608          310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND  389 (439)
Q Consensus       310 daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~  389 (439)
                      |+|++..++.++||.|+++||+|++++|++||+++||.|+..|.++++.+|.|.|+..+.|||+|++.+++|.++.+|+|
T Consensus       312 da~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~D  391 (583)
T KOG2454|consen  312 DADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVND  391 (583)
T ss_pred             cccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+++||+++.||.|+.||+++.|+||+||+|.||+++|+|+|||.||||+
T Consensus       392 Av~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~  441 (583)
T KOG2454|consen  392 AVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIM  441 (583)
T ss_pred             HHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccch
Confidence            99999999999999999999999999999999999999999999999985

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=8.3e-85  Score=616.17  Aligned_cols=380  Identities=30%  Similarity=0.453  Sum_probs=358.9

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..+.||+|+|+.+.+++++++.||++|+.|+.++..+.+|.+.||..|.+||.+|++++..+|.++|+++.++|.+|.|+
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd  102 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD  102 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+|||+.|+ .+||..+...++|++..+.+.......+.+   ...+..+.++|+||+++|+|||||...+..
T Consensus       103 La~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~~---~~rr~i~ikQPvGV~alItPWNFP~AMItR  178 (503)
T KOG2451|consen  103 LATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSLN---PNRRLIVIKQPVGVVALITPWNFPAAMITR  178 (503)
T ss_pred             HHHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCCC---CCceEEEEeccceeEEEecCcCChHHHHHh
Confidence            9999999999999999 599999999999999999887765543322   345678899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC---h-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF---A-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~---~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      +..+||++||+||+|||+.+|+++..++++..+    +|+|+|++|+|+++   . +.++.|+.  .|++|+||||+.+|
T Consensus       179 K~gAALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VG  254 (503)
T KOG2451|consen  179 KAGAALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVG  254 (503)
T ss_pred             HHHHHHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHH
Confidence            999999999999999999999999999998776    99999999999974   2 67899987  99999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      +.++.+++.++|++.+||||+.|+||+||+|+|.|++..+..+|.++||.|.+.+|+|||+++||+|++.|.++++++++
T Consensus       255 KiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~v  334 (503)
T KOG2451|consen  255 KILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKV  334 (503)
T ss_pred             HHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV  438 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv  438 (439)
                      |+.+++++..||+|++...++++++++||+++||++++||++..   ...+.|++||||.+|+++|-+..||+|||+
T Consensus       335 GdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPl  408 (503)
T KOG2451|consen  335 GDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPL  408 (503)
T ss_pred             cCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeecccccccc
Confidence            99999999999999999999999999999999999999999431   234589999999999999999999999997

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=9.2e-84  Score=673.17  Aligned_cols=406  Identities=19%  Similarity=0.264  Sum_probs=364.8

Q ss_pred             HHHHHHHHHhhCCCCCCeeeeeCCCCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHH
Q 013608           13 AYAICRFLLMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERV   92 (439)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av   92 (439)
                      .|++...||.+..+....            ..-....++||+|+|+.+.+++.++++||+||+++++++.++.+|+++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av  157 (604)
T PLN02419         90 FLALRSSWLSTSPEQSTQ------------PQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAV  157 (604)
T ss_pred             HHhhhhhhhccCCCcccC------------cccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHH
Confidence            467788887544332211            11123456799999998766788999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccC
Q 013608           93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS  172 (439)
Q Consensus        93 ~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~  172 (439)
                      ++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+..+++ +|+..+++.++|+++.++++.... .+
T Consensus       158 ~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~-~~  235 (604)
T PLN02419        158 SAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEY-LP  235 (604)
T ss_pred             HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCc-cc
Confidence            9999999999999999999999999999999999999999999999999995 799999999999999887665432 12


Q ss_pred             CCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcE
Q 013608          173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV  252 (439)
Q Consensus       173 ~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v  252 (439)
                      ..  ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++
T Consensus       236 ~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~Gvv  309 (604)
T PLN02419        236 NV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVL  309 (604)
T ss_pred             cc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceE
Confidence            11  1223467899999999999999999999999999999999999999999999999887777655    89999999


Q ss_pred             EEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCC
Q 013608          253 DVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ  330 (439)
Q Consensus       253 ~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ  330 (439)
                      |+|+|+++.++.|+.  ++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||
T Consensus       310 nvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ  389 (604)
T PLN02419        310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQ  389 (604)
T ss_pred             EEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCC
Confidence            999997778888886  999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCC
Q 013608          331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA  410 (439)
Q Consensus       331 ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~  410 (439)
                      .|++++|||||++ +|+|+++|.++++++++|+|.++++++|||++++++++++++|++|+++||++++||.+...+...
T Consensus       390 ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~  468 (604)
T PLN02419        390 RCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE  468 (604)
T ss_pred             CcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCC
Confidence            9999999999999 999999999999999999999999999999999999999999999999999999999854322235


Q ss_pred             CCceeccEEEecCCCCCcccccCccccCC
Q 013608          411 VDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       411 ~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .|+|++||||.++++||++++||+||||+
T Consensus       469 ~G~f~~PTVL~~v~~d~~i~~eEiFGPVl  497 (604)
T PLN02419        469 KGNFIGPTILSGVTPDMECYKEEIFGPVL  497 (604)
T ss_pred             CCeEEeeEEEeCCCCCCHHHcCCCcCCEE
Confidence            69999999999999999999999999985

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.1e-85  Score=645.18  Aligned_cols=379  Identities=28%  Similarity=0.431  Sum_probs=358.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      .++||+|+|.++.++++++++||+||+++++|+.++.+||+.++++|++||+  .|++++..+|.++|++++++++++++
T Consensus        21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~  100 (501)
T KOG2450|consen   21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD  100 (501)
T ss_pred             hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence            5899999999999999999999999999999999999999999999999999  69999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      .|+...+.|.|||..+++..++..+++.+||++..+++. .....+++   ....++++++|+|||+.|.|||||+....
T Consensus       101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~-~~~~~~~~---~~~~~yt~~eP~GV~G~I~pWN~Pllm~a  176 (501)
T KOG2450|consen  101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKI-HGSTIPTD---GEFFAYTRREPIGVCGQIIPWNFPLLMQA  176 (501)
T ss_pred             HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhc-ccccCCCC---CceEEEecCCcceeeeEeccCchHHHHHH
Confidence            999999999999999997799999999999999998876 22222222   23467899999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      |++++||++||+||+||++++|+|+.++++++++    +|+|+|++|+|+|.+ +.+.+|++  ++++|.||||+++|+.
T Consensus       177 wKlaPALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~  252 (501)
T KOG2450|consen  177 WKLAPALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKE  252 (501)
T ss_pred             HhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhH
Confidence            9999999999999999999999999998888766    999999999999976 88999998  9999999999999999


Q ss_pred             HHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh-Ccc
Q 013608          284 IMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA  361 (439)
Q Consensus       284 v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~-l~~  361 (439)
                      |+++++ .+++||++|||||+|.||++|+|++.|++.++.+.|.|+||.|++.+|+|||+++||+|++.++++.++ +++
T Consensus       253 I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kv  332 (501)
T KOG2450|consen  253 IMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKV  332 (501)
T ss_pred             HhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhccccc
Confidence            999988 559999999999999999999999999999999999999999999999999999999999999999976 999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |||.++.+..||.+++.+++|+..+|+.++++||+++|||.+.    ...|+|++|||+.+|+.+|+|++||+||||+
T Consensus       333 GdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~----g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv  406 (501)
T KOG2450|consen  333 GDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRL----GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVV  406 (501)
T ss_pred             CCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCccc----CCCceEECCeeccCCChhhhhhHhhccCceE
Confidence            9999999999999999999999999999999999999999872    3789999999999999999999999999985

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=9.1e-83  Score=659.11  Aligned_cols=383  Identities=27%  Similarity=0.450  Sum_probs=353.1

Q ss_pred             CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ++...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|+.+|.++|+++++.|+++
T Consensus         7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~   86 (482)
T PRK11241          7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEH   86 (482)
T ss_pred             ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence            34445689999998876778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..+++ .|+..+++.++|++..+.+.... ..+..  ......+++|+|+|||++|+|||||+..
T Consensus        87 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~  162 (482)
T PRK11241         87 QDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAM  162 (482)
T ss_pred             HHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEeeceEEEEECCCcChHHH
Confidence            99999999999999999994 79999999999999887654322 11111  1123467899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+++|++ +.++.|++  ++|.|+||||+++|
T Consensus       163 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G  238 (482)
T PRK11241        163 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIG  238 (482)
T ss_pred             HHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHH
Confidence            999999999999999999999999999887777655    999999999999865 67888987  79999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      ++|++.++++++|+++|||||||+||++|||+|.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       239 ~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~  318 (482)
T PRK11241        239 RQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHI  318 (482)
T ss_pred             HHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++|+++||++++||.+.    ..+|+|++|||+.+++++|++++||+||||+
T Consensus       319 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl  392 (482)
T PRK11241        319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLA  392 (482)
T ss_pred             CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEE
Confidence            9999999999999999999999999999999999999999742    1368999999999999999999999999985

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=3.7e-82  Score=650.01  Aligned_cols=372  Identities=33%  Similarity=0.507  Sum_probs=349.8

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      ++||+|+|+.+.+  +++++||+||+.+++++.++.+|+++|+++|+.||+.|+++++.+|.++|++++++|++|+++|+
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela   79 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA   79 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            5799999999865  89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||++.+++ +|+..+++.++|++..+.++.... .+...   ....+++++|+|||++|+|||||++..++++
T Consensus        80 ~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~  154 (472)
T COG1012          80 ALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGET-IPTDK---GSKALVRREPLGVVGAITPWNFPLALAAWKL  154 (472)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-cCCCC---CcceEEEeecceEEEEECCCCCHHHHHHhhH
Confidence            999999999999995 679999999999999988765544 33332   4678999999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|+.  ++++|+||||+.+|++|++
T Consensus       155 apALaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~  230 (472)
T COG1012         155 APALAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAA  230 (472)
T ss_pred             HHHHHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHH
Confidence            9999999999999999999999888887765    889999999999965 68899988  8999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh-CccCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPL  365 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~-l~~G~~~  365 (439)
                      .++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++.+|+|||+++||+|+++|.++ ++ +++||+.
T Consensus       231 ~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~  309 (472)
T COG1012         231 AAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPL  309 (472)
T ss_pred             HHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 65 9999988


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+.+++||||++.++++++++|++++++|+++++||.+   +  . |+|++|||+.+++++|++++||+||||+
T Consensus       310 d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~---~--~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl  377 (472)
T COG1012         310 DPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR---P--G-GYFVEPTILEGVTPDMRIAREEIFGPVL  377 (472)
T ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC---C--C-CeEECCEEEecCCCCChhhhccccCCce
Confidence            89999999999999999999999999999999999982   1  2 9999999999999999999999999995

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=6.8e-81  Score=647.90  Aligned_cols=384  Identities=22%  Similarity=0.345  Sum_probs=354.6

Q ss_pred             CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ++....+||+|+|+.+  +.+++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|
T Consensus        17 ~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~   94 (508)
T PLN02315         17 SSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAK   94 (508)
T ss_pred             CccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhH
Confidence            3455678999999864  57899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++ .+|+..+++.++|+++.+++... +..+...  .....++.|+|+|||++|+|||||+..
T Consensus        95 ~~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~  170 (508)
T PLN02315         95 LDYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNG-SIIPSER--PNHMMMEVWNPLGIVGVITAFNFPCAV  170 (508)
T ss_pred             HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-ccccCCC--CCceeEEEEecceEEEEECCCcchHHH
Confidence            9999999999999999999 58999999999999987765422 2222110  122346789999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      +++++++||++||+||+|||+.+|+++..+.+++.+++.++|+|+|++|+++++.+.++.|+.  ++|+|+||||+.+|+
T Consensus       171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~  250 (508)
T PLN02315        171 LGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGL  250 (508)
T ss_pred             HHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            999999999999999999999999999999999999999999999999999985577888886  999999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|
T Consensus       251 ~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG  330 (508)
T PLN02315        251 MVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG  330 (508)
T ss_pred             HHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||++..++++++++|++++++||++++||.+.    ...|+|++|||+ +++++|++++||+||||+
T Consensus       331 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl  402 (508)
T PLN02315        331 DPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVL  402 (508)
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEE
Confidence            999999999999999999999999999999999999999853    246899999999 699999999999999985

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-80  Score=643.21  Aligned_cols=387  Identities=27%  Similarity=0.405  Sum_probs=356.5

Q ss_pred             CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      +...+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|+++
T Consensus         3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~   82 (488)
T PRK13252          3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRER   82 (488)
T ss_pred             cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence            44566789999999877778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..+++..|+..+++.++|++++..... .+..+..   .....+++++|+|||++|+|||||+..
T Consensus        83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~-g~~~~~~---~~~~~~~~~~PlGVv~~I~p~N~P~~~  158 (488)
T PRK13252         83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALE-GEQIPLR---GGSFVYTRREPLGVCAGIGAWNYPIQI  158 (488)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccC---CCceEEEEEeeeeEEEEECCCchHHHH
Confidence            999999999999999999976799999999999998776532 2221111   123467899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      .++++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+++|+.+.++.|+.  .+|.|+||||+.+|+
T Consensus       159 ~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~  234 (488)
T PRK13252        159 ACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGK  234 (488)
T ss_pred             HHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHH
Confidence            999999999999999999999999999988877655    89999999999987778888887  799999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       235 ~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g  314 (488)
T PRK13252        235 KVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG  314 (488)
T ss_pred             HHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||++++++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl  391 (488)
T PRK13252        315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVM  391 (488)
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceE
Confidence            99999999999999999999999999999999999999975432223569999999999999999999999999985

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=2.5e-80  Score=644.29  Aligned_cols=381  Identities=28%  Similarity=0.445  Sum_probs=351.8

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ..+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++
T Consensus        19 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~   98 (501)
T PLN02766         19 KFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEH   98 (501)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence            345679999999877778999999999999999999999999999999999997  599999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+|||..+++..|+..+++.++|+++..+++.. +..+..   .....+++++|+|||++|+|||||+..
T Consensus        99 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~  174 (501)
T PLN02766         99 IEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHG-ETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTM  174 (501)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceEEEEeccceEEEEECCCCChHHH
Confidence            9999999999999999988667999999999999988776533 221111   123467889999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++.++.+++++    +|+|+|++|+|+|++ +.++.|++  ++|+|.||||+.+|
T Consensus       175 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G  250 (501)
T PLN02766        175 FFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVG  250 (501)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence            999999999999999999999999999888777654    999999999999964 67888887  89999999999999


Q ss_pred             HHHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      ++|++.++ ++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       251 ~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~  330 (501)
T PLN02766        251 RKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWV  330 (501)
T ss_pred             HHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcc
Confidence            99999999 69999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.++++++|||+++.++++++++|++++++||++++||.+.    ...|+|++|||+.++++||++++||+||||+
T Consensus       331 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl  405 (501)
T PLN02766        331 VGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVM  405 (501)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceE
Confidence            99999999999999999999999999999999999999999743    2468999999999999999999999999985

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=3.4e-80  Score=641.10  Aligned_cols=382  Identities=24%  Similarity=0.386  Sum_probs=350.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      .++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++++|+++++
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999999877778999999999999999999999999999999999997  59999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccc-cccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-IHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      +|++++++|+||+..++...|+..+++.++|++...++.... ..+..... .....+++++|+|||++|+|||||+...
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~  164 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGK-TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMML  164 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccccccCCCCceEEEEeeccceEEEEcCCchHHHHH
Confidence            999999999999999986679999999999999877654322 21211000 1123578999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+|+|++ +.++.|+.  .+++|+||||+.+|+
T Consensus       165 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~  240 (486)
T cd07140         165 AWKMAACLAAGNTVVLKPAQVTPLTALKFAELTV----KAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK  240 (486)
T ss_pred             HHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHH----HcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence            9999999999999999999999999988776655    4999999999999865 66788887  899999999999999


Q ss_pred             HHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          283 MIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       283 ~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      .|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       241 ~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~  320 (486)
T cd07140         241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKI  320 (486)
T ss_pred             HHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCc
Confidence            99999996 99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||++++++++++++|++|+++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       321 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl  394 (486)
T cd07140         321 GDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVD----RPGFFFEPTVFTDVEDHMFIAKEESFGPIM  394 (486)
T ss_pred             cCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeECCEEEeCCCCCChhhhCCCCCCeE
Confidence            99999999999999999999999999999999999999997532    368999999999999999999999999985

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=1.1e-79  Score=638.01  Aligned_cols=381  Identities=29%  Similarity=0.398  Sum_probs=349.1

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++. |++++..+|.++|+++++.|++++++|
T Consensus         1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (477)
T cd07113           1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL   80 (477)
T ss_pred             CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence            4689999998777788999999999999999999999999999999999985 999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCC-ccc--cccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSG-RSM--IHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~--~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++++++|+||+..+++..|+..+++.++|+++...+.... ..+.. ..+  .....+++|+|+|||++|+|||||+...
T Consensus        81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~  159 (477)
T cd07113          81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE-TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA  159 (477)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence            9999999999999986569999999999998776654221 11110 000  1234678999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      ++++++||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+|+|+.+.++.|++  .+|+|+||||+.+|+.
T Consensus       160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~  235 (477)
T cd07113         160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKK  235 (477)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHH
Confidence            99999999999999999999999999887776654    99999999999987667888887  7999999999999999


Q ss_pred             HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608          284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~  363 (439)
                      |++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus       236 i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~  315 (477)
T cd07113         236 IGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGS  315 (477)
T ss_pred             HHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |.++++++|||++++++++++++|++|+++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       316 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl  387 (477)
T cd07113         316 PMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALA----GEGYFVQPTLVLARSADSRLMREETFGPVV  387 (477)
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeEeCEEEecCCCCChHHhCCCCCCeE
Confidence            999999999999999999999999999999999999997531    358999999999999999999999999985

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.4e-79  Score=638.62  Aligned_cols=382  Identities=29%  Similarity=0.447  Sum_probs=352.6

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      +...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++
T Consensus        22 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~  101 (498)
T PLN02278         22 LLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANK  101 (498)
T ss_pred             CCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            34467899999988766789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+||+..++. .|+..+++.++|+++..+++... ..+..  ......+++|+|+|||++|+|||||+...
T Consensus       102 ~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~  177 (498)
T PLN02278        102 EDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGD-IIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMI  177 (498)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEeecccEEEEECCCccHHHHH
Confidence            9999999999999999985 79999999999999988765432 22211  12234578899999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+|+|+. +.++.|+.  ++|+|.||||+.+|+
T Consensus       178 ~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~----eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~  253 (498)
T PLN02278        178 TRKVGPALAAGCTVVVKPSELTPLTALAAAELAL----QAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGK  253 (498)
T ss_pred             HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHH
Confidence            9999999999999999999999999987766655    5999999999999865 66788887  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       254 ~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G  333 (498)
T PLN02278        254 KLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVG  333 (498)
T ss_pred             HHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+++++++||++++.++++++++|++++++||++++||....    .+|+|++|||+.+++++|++++||+||||+
T Consensus       334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl  406 (498)
T PLN02278        334 DGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHS----LGGTFYEPTVLGDVTEDMLIFREEVFGPVA  406 (498)
T ss_pred             CCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCceEeeEEEecCCCCChhhhCCCcCCEE
Confidence            9999999999999999999999999999999999999997421    358999999999999999999999999985

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.6e-79  Score=636.89  Aligned_cols=382  Identities=26%  Similarity=0.369  Sum_probs=355.4

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE  130 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~  130 (439)
                      +||+|+|+.+. +.+++++||+||+++++++.++.+|++.++++|++||+.|++++.++|.++|+++++.|++++++|++
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   79 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR   79 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            68999999875 67899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHH
Q 013608          131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML  210 (439)
Q Consensus       131 ~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~  210 (439)
                      ++++|+||+..+++ +|+..+++.++|++...++.... ..+..  ......+++++|+|||++|+|||||+...+++++
T Consensus        80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~  155 (478)
T cd07086          80 LVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGL-TIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAA  155 (478)
T ss_pred             HHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence            99999999999985 79999999999999887764322 12211  1123467899999999999999999999999999


Q ss_pred             HHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608          211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA  288 (439)
Q Consensus       211 ~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a  288 (439)
                      +||++||+||+|||+.+|+++..++++++++|.++|+|+|++|+++++.+.++.|+.  ++|.|.||||+.+|+.|++.+
T Consensus       156 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a  235 (478)
T cd07086         156 IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETV  235 (478)
T ss_pred             HHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987677788887  699999999999999999999


Q ss_pred             hccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCC
Q 013608          289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK  368 (439)
Q Consensus       289 a~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~  368 (439)
                      +++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++
T Consensus       236 a~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  315 (478)
T cd07086         236 ARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEG  315 (478)
T ss_pred             hccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       369 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|||+++.++++++++|++|+++|+++++||.+...  ..+|+|++|||+.+++++|++++||+||||+
T Consensus       316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl  384 (478)
T cd07086         316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPIL  384 (478)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEE
Confidence            99999999999999999999999999999999985421  1368999999999999999999999999985

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=1.3e-79  Score=635.01  Aligned_cols=378  Identities=25%  Similarity=0.377  Sum_probs=348.1

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++++++|
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF   80 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            357999999876 4678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+|||..++...|+..+++.++|+++..... .....+..  ......+++|+|+|||++|+|||||+...+++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~-~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  157 (472)
T TIGR03374        81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCL-SGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  157 (472)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHH
Confidence            9999999999999886579999999999998876543 22211111  12345688999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+++++.+     ++|+|++|+++|++ +.++.|+.  .+|+|.||||+.+|++|+
T Consensus       158 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~-----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~  232 (472)
T TIGR03374       158 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL  232 (472)
T ss_pred             HHHHHhcCCEEEecCCCCCCHHHHHHHHHHHH-----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            99999999999999999999999988888764     49999999999954 67888986  999999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus       233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~  312 (472)
T TIGR03374       233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD  312 (472)
T ss_pred             HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCC-CEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||++..++++++++|++++++| +++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl  383 (472)
T TIGR03374       313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVV  383 (472)
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceE
Confidence            99999999999999999999999999999 8999999742    2358999999999999999999999999985

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.7e-79  Score=636.29  Aligned_cols=385  Identities=31%  Similarity=0.449  Sum_probs=353.4

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHH-----HHHhhcCHHHHHHHHHHHHHHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-----KVWAKSSFKQRRQFLRILLKYII  122 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~l~~~l~  122 (439)
                      +.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||     +.|+.++..+|.++|++++++|+
T Consensus         7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~   86 (503)
T PLN02467          7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT   86 (503)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence            3578999999987777899999999999999999999999999999999999     89999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcch
Q 013608          123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF  202 (439)
Q Consensus       123 ~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~  202 (439)
                      +++++|++++++|+||+..++. .|+..+++.++|+++..++.......+......+...+++|+|+|||++|+|||||+
T Consensus        87 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  165 (503)
T PLN02467         87 ERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPL  165 (503)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHH
Confidence            9999999999999999999996 699999999999998887653322111111111235788999999999999999999


Q ss_pred             hhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChH
Q 013608          203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       203 ~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      ...++++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+++|++ +.++.|+.  .+|.|+||||+.
T Consensus       166 ~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~  241 (503)
T PLN02467        166 LMATWKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA  241 (503)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence            99999999999999999999999999999988777654    999999999999964 67888887  899999999999


Q ss_pred             HHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhC
Q 013608          280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV  359 (439)
Q Consensus       280 ~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l  359 (439)
                      +|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++
T Consensus       242 ~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  321 (503)
T PLN02467        242 TGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI  321 (503)
T ss_pred             HHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       360 ~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|+|.++++++|||+++.++++++++|++++++||++++||.+...  ...|+|++|||+.+++++|++++||+||||+
T Consensus       322 ~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl  399 (503)
T PLN02467        322 KISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEH--LKKGFFIEPTIITDVTTSMQIWREEVFGPVL  399 (503)
T ss_pred             CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC--CCCCeEEeeEEEeCCCCCChHhhCCCCCceE
Confidence            99999999999999999999999999999999999999999975321  2469999999999999999999999999985

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=2.6e-79  Score=634.34  Aligned_cols=377  Identities=23%  Similarity=0.342  Sum_probs=349.8

Q ss_pred             ccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 013608           52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI  131 (439)
Q Consensus        52 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~  131 (439)
                      +|+|+|+.+  +++++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus         2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~   79 (474)
T cd07130           2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL   79 (474)
T ss_pred             eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            689999874  478999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHH
Q 013608          132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA  211 (439)
Q Consensus       132 ~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~  211 (439)
                      +++|+|||..++. +|+..+++.++|+++..+... ....+..  ......+++|+|+|||++|+|||||+..+++++++
T Consensus        80 ~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~  155 (474)
T cd07130          80 VSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLY-GLTIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI  155 (474)
T ss_pred             HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhc-CccccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence            9999999999984 799999999999987655432 2222211  12234578899999999999999999999999999


Q ss_pred             HHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhh
Q 013608          212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS  289 (439)
Q Consensus       212 AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa  289 (439)
                      ||++||+||+|||+.+|+++.++.+++.++|.++|+|+|++|+++|+.+.++.|++  ++|+|+||||+.+|++|++.++
T Consensus       156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa  235 (474)
T cd07130         156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA  235 (474)
T ss_pred             HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997778888987  9999999999999999999999


Q ss_pred             ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCC
Q 013608          290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY  369 (439)
Q Consensus       290 ~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~  369 (439)
                      ++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus       236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~  315 (474)
T cd07130         236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGT  315 (474)
T ss_pred             hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       370 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|||+++.++++++++|++|+++||++++||.+..    .+|+|++|||+.++++ |++++||+||||+
T Consensus       316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl  380 (474)
T cd07130         316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVID----GPGNYVEPTIVEGLSD-APIVKEETFAPIL  380 (474)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCeEEccEEEecCCC-CHHHhCCCcCCeE
Confidence            999999999999999999999999999999998532    3589999999988766 9999999999985

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=2.7e-79  Score=634.83  Aligned_cols=381  Identities=29%  Similarity=0.422  Sum_probs=352.6

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      ++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|+
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA   81 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            57999999987778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..++...|+..+++.++|+++...+... ...+..   .....+++++|+|||++|+|||||+...++++
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i  157 (480)
T cd07559          82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG-SLSEID---EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKL  157 (480)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC---CCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence            99999999999999767999999999999987664322 111111   23456789999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+++++++    + +|+|++|+++|++ +.++.|++  ++|+|+||||+.+|++|++
T Consensus       158 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~  232 (480)
T cd07559         158 APALAAGNTVVLKPASQTPLSILVLMELIGD----L-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQ  232 (480)
T ss_pred             HHHHHcCCEEEEECchhhhHHHHHHHHHHHH----h-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            9999999999999999999999998888775    3 9999999999964 67888887  8999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCC-----CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      .++++++|+++|||||||+||++|+     |++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus       233 ~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~  312 (480)
T cd07559         233 YAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKV  312 (480)
T ss_pred             HHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999     99999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|+++++++|||++++++++++++|++++++||++++||.+...+....|+|++|||+.++++||++++||+||||+
T Consensus       313 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  390 (480)
T cd07559         313 GNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVL  390 (480)
T ss_pred             CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceE
Confidence            999999999999999999999999999999999999999986543333579999999999999999999999999985

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=4.1e-79  Score=634.23  Aligned_cols=382  Identities=24%  Similarity=0.341  Sum_probs=351.9

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      .+||+|+|+.+.++.+++++||+||+++++++.++.+|++.++++|++|++.|+++|+.+|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~   81 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA   81 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999987667889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..+++ +|+..+++.++|++...+.. ..+..+..  ..+...+++++|+|||++|+|||||+...++++
T Consensus        82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i  157 (478)
T cd07085          82 RLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLL-KGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMF  157 (478)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence            999999999999984 79999999999998765533 22222211  112346889999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      ++||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+++|+.+.++.|++  ++|+|+||||+.+|+.|++.
T Consensus       158 ~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~  233 (478)
T cd07085         158 PMAIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYER  233 (478)
T ss_pred             HHHHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence            9999999999999999999999988877665    89999999999997778888887  79999999999999999999


Q ss_pred             hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608          288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG  367 (439)
Q Consensus       288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~  367 (439)
                      ++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus       234 aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~  313 (478)
T cd07085         234 AAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDP  313 (478)
T ss_pred             HhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++||++++.++++++++|++++++||++++||.....+..++|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  385 (478)
T cd07085         314 GADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVL  385 (478)
T ss_pred             CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeE
Confidence            999999999999999999999999999999999986443323569999999999999999999999999985

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=4.3e-79  Score=632.04  Aligned_cols=381  Identities=30%  Similarity=0.431  Sum_probs=351.4

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      .+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+++|.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   81 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA   81 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence            47899999987777899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+|||..+++..|+..+++.++|+++...+... +..+..   .....+++++|+|||++|+|||||+...++++
T Consensus        82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i  157 (475)
T cd07117          82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG-SANMID---EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKL  157 (475)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccccC---CCceeEEEEeecceEEEECCCccHHHHHHHHH
Confidence            99999999999999767999999999999887654322 111111   12346789999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+++++++     ++|+|++|+|+|++ +.++.|+.  ++|.|+||||+.+|+.|++
T Consensus       158 ~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~  232 (475)
T cd07117         158 APALAAGNTVVIKPSSTTSLSLLELAKIIQD-----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAI  232 (475)
T ss_pred             HHHHHcCCEEEEECCccCcHHHHHHHHHHHH-----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            9999999999999999999999998888865     49999999999864 67888887  7999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~  366 (439)
                      .++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus       233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~  312 (475)
T cd07117         233 AAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLD  312 (475)
T ss_pred             HHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++||++++.++++++++|++++++||++++||.+...+..+.|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  385 (475)
T cd07117         313 PDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVA  385 (475)
T ss_pred             CCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeE
Confidence            9999999999999999999999999999999999986432223468999999999999999999999999985

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=5.4e-79  Score=637.12  Aligned_cols=383  Identities=27%  Similarity=0.436  Sum_probs=352.5

Q ss_pred             CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHH
Q 013608           45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYII  122 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~  122 (439)
                      ++..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.  |+.++..+|.++|+++++.|+
T Consensus        54 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~  133 (538)
T PLN02466         54 QVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLE  133 (538)
T ss_pred             ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHH
Confidence            445567899999998877889999999999999999999999999999999999974  999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcch
Q 013608          123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF  202 (439)
Q Consensus       123 ~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~  202 (439)
                      +|+++|++++++|+||+..++...|+..+++.++|++.+.++.... ..+..   .....+++++|+|||++|+|||||+
T Consensus       134 ~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~  209 (538)
T PLN02466        134 KHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGL-TVPAD---GPHHVQTLHEPIGVAGQIIPWNFPL  209 (538)
T ss_pred             HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEecceEEEEECCCchHH
Confidence            9999999999999999999986679999999999999876654322 12211   1234678999999999999999999


Q ss_pred             hhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChH
Q 013608          203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       203 ~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      ...++++++||++||+||+|||+.+|+++.++.+++++    +|+|+|++|+|+|.+ +.++.|++  ++|+|.||||+.
T Consensus       210 ~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~  285 (538)
T PLN02466        210 LMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTD  285 (538)
T ss_pred             HHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHH
Confidence            99999999999999999999999999999888777655    999999999999965 56788887  899999999999


Q ss_pred             HHHHHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608          280 VGRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS  358 (439)
Q Consensus       280 ~~~~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~  358 (439)
                      +|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.+
T Consensus       286 ~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  365 (538)
T PLN02466        286 TGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALK  365 (538)
T ss_pred             HHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHh
Confidence            99999999985 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608          359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV  438 (439)
Q Consensus       359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv  438 (439)
                      +++|+|.++++++||+++.+++++++++|++++++||++++||.+.    ...|+|++|||+.++++||++++||+||||
T Consensus       366 ~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPV  441 (538)
T PLN02466        366 RVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPV  441 (538)
T ss_pred             ccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcE
Confidence            9999999999999999999999999999999999999999999853    236899999999999999999999999998


Q ss_pred             C
Q 013608          439 S  439 (439)
Q Consensus       439 ~  439 (439)
                      +
T Consensus       442 l  442 (538)
T PLN02466        442 Q  442 (538)
T ss_pred             E
Confidence            5

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-78  Score=630.75  Aligned_cols=383  Identities=28%  Similarity=0.375  Sum_probs=348.1

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ++||+|+|+.  ++++++++||+||+++++++.++.+|+++++++|++||.. |+++|..+|.++|+++++.|++++++|
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   79 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF   79 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            5799999986  4678999999999999999999999999999999999997 999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCc-cccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      ++++++|+|||..++...|+..+++.++|+++..++... ...+... .......+++++|+|||++|+|||||+...++
T Consensus        80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~  158 (481)
T TIGR03216        80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPT-ECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTW  158 (481)
T ss_pred             HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcC-ccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHH
Confidence            999999999999988656999999999999988765322 1111100 00123457889999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh--hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      ++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+++|.+  +.++.|+.  .+|+|+||||+.+|+.
T Consensus       159 ~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~  234 (481)
T TIGR03216       159 KVGPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSA  234 (481)
T ss_pred             HHHHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence            999999999999999999999999888777654    999999999999854  36777876  8999999999999999


Q ss_pred             HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608          284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~  363 (439)
                      |++.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus       235 i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~  314 (481)
T TIGR03216       235 IMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGV  314 (481)
T ss_pred             HHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCC-CCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |.++++++||++++.++++++++|++++++||++++||.+...+ ...+|+|++|||+.+++++|++++||+||||+
T Consensus       315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl  391 (481)
T TIGR03216       315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCC  391 (481)
T ss_pred             CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceE
Confidence            99999999999999999999999999999999999999754321 12469999999999999999999999999985

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=1.5e-78  Score=631.54  Aligned_cols=381  Identities=27%  Similarity=0.424  Sum_probs=351.3

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      ++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~   81 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA   81 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            57999999987667889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..+++ .|+..+++.++|+++..++.+.....+.+    ....+++++|+|||++|+|||||+...++++
T Consensus        82 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~  156 (488)
T TIGR02299        82 VLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD----THLNYTVRVPVGPVGLITPWNAPFMLSTWKI  156 (488)
T ss_pred             HHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC----CceEEEEEEecceEEEECCCccHHHHHHHHH
Confidence            999999999999996 79999999999999988755544333322    2346788999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+++|.+ +.++.|+.  .+|.|+||||+.+|++|++
T Consensus       157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~  232 (488)
T TIGR02299       157 APALAFGNTVVLKPAEWSPLTAARLAEIAK----EAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR  232 (488)
T ss_pred             HHHHHcCCEEEEECchhchHHHHHHHHHHH----HcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence            999999999999999999999887776655    5999999999999854 66788887  8999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~  366 (439)
                      .++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+
T Consensus       233 ~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~  312 (488)
T TIGR02299       233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLD  312 (488)
T ss_pred             HHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC---CCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~---~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|||++++++++++++|++++++||++++||.....   +....|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  388 (488)
T TIGR02299       313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVL  388 (488)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeE
Confidence            9999999999999999999999999999999999975321   112358999999999999999999999999985

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=8.2e-79  Score=631.31  Aligned_cols=379  Identities=28%  Similarity=0.451  Sum_probs=349.8

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      +.+||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.  |+++|.++|.++|+++++.|+++++
T Consensus         4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07142           4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            45799999998767788999999999999999999999999999999999975  9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+|||..+++..|+..+++.++|++...++.... ..+..   .....+++++|+|||++|+|||||+...+
T Consensus        84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~  159 (476)
T cd07142          84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGM-TLPAD---GPHHVYTLHEPIGVVGQIIPWNFPLLMFA  159 (476)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEeceeeEEEECCCccHHHHHH
Confidence            999999999999999987679999999999999877654322 22211   12345789999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+++++.    ++|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|++
T Consensus       160 ~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~  235 (476)
T cd07142         160 WKVGPALACGNTIVLKPAEQTPLSALLAAKLAA----EAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKI  235 (476)
T ss_pred             HHHHHHHHcCCEEEEECCCcccHHHHHHHHHHH----HcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHH
Confidence            999999999999999999999999988777655    4999999999999865 57788887  8999999999999999


Q ss_pred             HHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       284 v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      |++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       236 v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G  315 (476)
T cd07142         236 IMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVG  315 (476)
T ss_pred             HHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence            9999997 999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++||++++.++++++++|++++++||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       316 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  388 (476)
T cd07142         316 DPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQ  388 (476)
T ss_pred             CCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceE
Confidence            999999999999999999999999999999999999999853    2368999999999999999999999999985

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=1.9e-78  Score=633.14  Aligned_cols=377  Identities=22%  Similarity=0.307  Sum_probs=346.8

Q ss_pred             cccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH-hHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE-HQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~-~~~  126 (439)
                      ..+||+|+|+.+  +++++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++ +++
T Consensus        33 ~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~  110 (522)
T cd07123          33 IPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRY  110 (522)
T ss_pred             cCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHH
Confidence            457999999864  56899999995 99999999999999999999999999999999999999999999999996 899


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeec-cEEEEEcCCCcchhhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNI  205 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N~P~~~~  205 (439)
                      +|++++++|+||+..++...|+...++.++|++..++++.........   .+..++++++|+ |||++|+|||||+...
T Consensus       111 ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~~GVv~~I~PwNfP~~~~  187 (522)
T cd07123         111 ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSP---AGVWNRLEYRPLEGFVYAVSPFNFTAIGG  187 (522)
T ss_pred             HHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCC---CCceeEEEEecCCceEEEECCcccHHHHH
Confidence            999999999999999886668999999999999888776543322111   134568899998 9999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      .+++++|| +||+||+|||+++|+++..+.+++.+    +|+|+|++|+++|++ +.++.|+.  +++.|+||||+.+|+
T Consensus       188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~  262 (522)
T cd07123         188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFK  262 (522)
T ss_pred             HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHH
Confidence            99999999 69999999999999999988777654    999999999999966 57888887  999999999999999


Q ss_pred             HHHHHhhccCC------ceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHH
Q 013608          283 MIMRNASKTLT------PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV  356 (439)
Q Consensus       283 ~v~~~aa~~l~------pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~  356 (439)
                      .|++.++++++      |+++|||||||+||++|+|+|.|++.+++|+|.|+||.|++++|||||+++||+|+++|.+++
T Consensus       263 ~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~  342 (522)
T cd07123         263 SLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEEL  342 (522)
T ss_pred             HHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence            99999999987      899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcc
Q 013608          357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEII  435 (439)
Q Consensus       357 ~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~F  435 (439)
                      +++++|+|.++++++||||+++++++++++|++++++ ||++++||.+.    ...|+|++|||+.+++++|++++||+|
T Consensus       343 ~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiF  418 (522)
T cd07123         343 KEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIF  418 (522)
T ss_pred             hhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCC
Confidence            9999999999999999999999999999999999999 99999999742    236899999999999999999999999


Q ss_pred             ccCC
Q 013608          436 LWVS  439 (439)
Q Consensus       436 gPv~  439 (439)
                      |||+
T Consensus       419 GPVl  422 (522)
T cd07123         419 GPVL  422 (522)
T ss_pred             CCeE
Confidence            9985

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=4.4e-78  Score=621.68  Aligned_cols=364  Identities=27%  Similarity=0.450  Sum_probs=338.6

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++++||+||+++++++.++.+|+++++++|++||+.|+.+++++|.++|+++++.|++++++|++++++|+|||..++ .
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~   81 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA-K   81 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-H
Confidence            789999999999999999999999999999999999999999999999999999999999999999999999999998 4


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      .|+..+++.++|+++.+++++.......+. .....++++++|+|||++|+|||||++..++++++||++||+||+|||+
T Consensus        82 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~  160 (457)
T PRK09406         82 AEALKCAKGFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHAS  160 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCC
Confidence            799999999999999988876543221111 1223568899999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      .+|+++..+.+++.+    +|+|+|++|+|+++.+.+..|++  ++++|+||||+.+|+.|++.++++++|+++|+||||
T Consensus       161 ~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~  236 (457)
T PRK09406        161 NVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSD  236 (457)
T ss_pred             cCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCC
Confidence            999999887777654    89999999999865567778886  999999999999999999999999999999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      |+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+++++
T Consensus       237 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~  316 (457)
T PRK09406        237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEV  316 (457)
T ss_pred             eeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|++++++||++++||.+.+    ..|+|++|||+.+++++|++++||+||||+
T Consensus       317 ~~~i~~a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  368 (457)
T PRK09406        317 EKQVDDAVAAGATILCGGKRPD----GPGWFYPPTVITDITPDMRLYTEEVFGPVA  368 (457)
T ss_pred             HHHHHHHHHCCCEEEeCCCcCC----CCCceEccEEeecCCCCCHHhhCCCCCceE
Confidence            9999999999999999998532    368999999999999999999999999985

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=6.4e-78  Score=624.51  Aligned_cols=379  Identities=27%  Similarity=0.387  Sum_probs=348.4

Q ss_pred             cccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      +++||+|+|+.+.  ..++++||. ||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++
T Consensus         1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e   78 (473)
T cd07097           1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE   78 (473)
T ss_pred             CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            3578999998764  347999999 5999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+|||..+++ .|+..+++.++|+++..++...+.. +..  ..+...+++++|+|||++|+|||||+...++
T Consensus        79 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~  154 (473)
T cd07097          79 LARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETL-PST--RPGVEVETTREPLGVVGLITPWNFPIAIPAW  154 (473)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceEEEEEEeeeeEEEEcccChHHHHHHH
Confidence            99999999999999995 6999999999999988776543221 111  1234568899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+++|++ +.++.|++  .+|+|+||||+.+|+.|
T Consensus       155 ~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i  230 (473)
T cd07097         155 KIAPALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI  230 (473)
T ss_pred             HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence            999999999999999999999999988877654    899999999999965 57888887  89999999999999999


Q ss_pred             HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608          285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP  364 (439)
Q Consensus       285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~  364 (439)
                      ++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       231 ~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  310 (473)
T cd07097         231 AAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDA  310 (473)
T ss_pred             HHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++++++|||+++.++++++++|++++++||++++||.....  ...|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  383 (473)
T cd07097         311 LDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVA  383 (473)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceE
Confidence            999999999999999999999999999999999999975321  1368999999999999999999999999985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=9.6e-78  Score=622.54  Aligned_cols=380  Identities=27%  Similarity=0.412  Sum_probs=350.8

Q ss_pred             ccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 013608           52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI  131 (439)
Q Consensus        52 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~  131 (439)
                      ||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~   80 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL   80 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            68999998777789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHH
Q 013608          132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA  211 (439)
Q Consensus       132 ~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~  211 (439)
                      +++|+||+..++...|+..+++.++|+++..++... ...+...   ....+++++|+|||++|+|||||+...++++++
T Consensus        81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~---~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~  156 (467)
T TIGR01804        81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGG-EIIPLPI---PSFSYTIREPLGVCVGIGAWNYPLQIASWKIAP  156 (467)
T ss_pred             HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCC-ccccCCC---CceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence            999999999998667999999999999988776322 2212111   134578999999999999999999999999999


Q ss_pred             HHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608          212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA  288 (439)
Q Consensus       212 AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a  288 (439)
                      ||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+++|+ .+.++.|+.  .+|.|+||||+.+|++|++.+
T Consensus       157 ALaaGN~VvlKps~~tp~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a  232 (467)
T TIGR01804       157 ALAAGNAMVFKPSEITPLTALKVAELME----EAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA  232 (467)
T ss_pred             HHhcCCEEEeeCCccCcHHHHHHHHHHH----HcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            9999999999999999999998877665    499999999999987 477888887  799999999999999999999


Q ss_pred             hccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCC
Q 013608          289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK  368 (439)
Q Consensus       289 a~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~  368 (439)
                      +++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++
T Consensus       233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  312 (467)
T TIGR01804       233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEA  312 (467)
T ss_pred             HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       369 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|||++++++++++++|++++++||++++||.....+....|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  383 (467)
T TIGR01804       313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVM  383 (467)
T ss_pred             CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceE
Confidence            99999999999999999999999999999999975433323468999999999999999999999999985

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-78  Score=620.74  Aligned_cols=364  Identities=25%  Similarity=0.439  Sum_probs=338.5

Q ss_pred             CCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 013608           63 ETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD  142 (439)
Q Consensus        63 ~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~  142 (439)
                      .+.++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+|||..+
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~   85 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ   85 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEe
Q 013608          143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK  222 (439)
Q Consensus       143 a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlK  222 (439)
                      ++ +|+..+++.++|++.++.+++......    ......+++++|+|||++|+|||||++.+++++++||++||+||+|
T Consensus        86 a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~K  160 (462)
T PRK13968         86 AR-AEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLK  160 (462)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence            85 799999999999999888776543221    1234578999999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcC
Q 013608          223 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG  300 (439)
Q Consensus       223 ps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg  300 (439)
                      ||+.+|+++..+.+++.    ++|+|+|++|+|+|+.+.+..++.  .+|+|+||||+.+|++|++.++++++|+++|+|
T Consensus       161 Ps~~tp~~~~~l~~~~~----~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElG  236 (462)
T PRK13968        161 HAPNVMGCAQLIAQVFK----DAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG  236 (462)
T ss_pred             CCCcChHHHHHHHHHHH----HcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecC
Confidence            99999999987766655    599999999999986555555665  899999999999999999999999999999999


Q ss_pred             CCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHH
Q 013608          301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS  380 (439)
Q Consensus       301 Gk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~  380 (439)
                      ||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++..++
T Consensus       237 Gk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~  316 (462)
T PRK13968        237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLR  316 (462)
T ss_pred             CCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       381 ~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|++++++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       317 ~~~~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl  371 (462)
T PRK13968        317 DELHHQVEATLAEGARLLLGGEKIA----GAGNYYAPTVLANVTPEMTAFREELFGPVA  371 (462)
T ss_pred             HHHHHHHHHHHHCCCEEEeCCCcCC----CCceEECCEEEeCCCCCChHHhCCCcCCEE
Confidence            9999999999999999999998532    258999999999999999999999999985

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=6.6e-78  Score=625.26  Aligned_cols=380  Identities=27%  Similarity=0.410  Sum_probs=351.4

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      .+++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+   .|+++|.++|.++|+++++.|+++
T Consensus         6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~   85 (481)
T cd07141           6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD   85 (481)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence            35689999999877788999999999999999999999999999999999998   699999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++...|+..+++.++++++..+++... ..+..   .....+++++|+|||++|+|||||+..
T Consensus        86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~  161 (481)
T cd07141          86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGK-TIPMD---GDFFTYTRHEPVGVCGQIIPWNFPLLM  161 (481)
T ss_pred             HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eecCC---CCceEEEEEeceeEEEEEccChhHHHH
Confidence            99999999999999998776779999999999999887776432 22211   123467899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+|+|++ +.++.|++  .+|.|+||||+.+|
T Consensus       162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g  237 (481)
T cd07141         162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIK----EAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVG  237 (481)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence            99999999999999999999999999988777765    4999999999999965 66788887  89999999999999


Q ss_pred             HHHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      ++|++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++|||||+++||+|+++|.+++++++
T Consensus       238 ~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  317 (481)
T cd07141         238 KLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRV  317 (481)
T ss_pred             HHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence            999999987 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|+++++++||||++.+++++.++|++|+++||++++||+..    ...|+|++|||+.+++++|++++||+||||+
T Consensus       318 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  392 (481)
T cd07141         318 VGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQ  392 (481)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeE
Confidence            99999999999999999999999999999999999999999853    2368999999999999999999999999985

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=8.3e-78  Score=625.32  Aligned_cols=379  Identities=28%  Similarity=0.414  Sum_probs=350.3

Q ss_pred             ccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        52 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      ||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6899998876678899999999999999999999999999999999997  59999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..++. .|+..+++.++|++++.++.. .+..+..   .+...+++++|+|||++|+|||||+...++++
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~  155 (482)
T cd07119          81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKET-GEVYDVP---PHVISRTVREPVGVCGLITPWNYPLLQAAWKL  155 (482)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-CccccCC---CCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence            999999999999995 699999999999999887632 2222211   23457799999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|++++ +.++.|++  .+|+|+||||+.+|++|++
T Consensus       156 ~~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~  231 (482)
T cd07119         156 APALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR  231 (482)
T ss_pred             HHHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            9999999999999999999999888777665    999999999999866 47888887  8999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~  366 (439)
                      .++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus       232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~  311 (482)
T cd07119         232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLD  311 (482)
T ss_pred             HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++||++++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus       312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  384 (482)
T cd07119         312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVL  384 (482)
T ss_pred             CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceE
Confidence            9999999999999999999999999999999999985432223469999999999999999999999999985

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=1.5e-77  Score=620.99  Aligned_cols=376  Identities=26%  Similarity=0.397  Sum_probs=348.8

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE  130 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~  130 (439)
                      +||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~   80 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ   80 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            47999999887778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHH
Q 013608          131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML  210 (439)
Q Consensus       131 ~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~  210 (439)
                      ++++|+||+..++...|+..+++.++++++...++.....        ....+++++|+|||++|+|||||++.++++++
T Consensus        81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  152 (466)
T cd07138          81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVA  152 (466)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHH
Confidence            9999999999988667999999999999988766533221        12456789999999999999999999999999


Q ss_pred             HHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       211 ~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      +||++||+||+|||+.+|+++..+.+++++    +|+|+|++|++++++ +.++.|+.  .++.|+||||+.+|+.|++.
T Consensus       153 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~  228 (466)
T cd07138         153 PALAAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA  228 (466)
T ss_pred             HHHhcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            999999999999999999999887777654    999999999999865 57888887  89999999999999999999


Q ss_pred             hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608          288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG  367 (439)
Q Consensus       288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~  367 (439)
                      ++++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus       229 aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  308 (466)
T cd07138         229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDP  308 (466)
T ss_pred             HhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|||+++.++++++++|++++++||++++||..... ....|+|++|||+.+++++|++++||+||||+
T Consensus       309 ~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~-~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl  379 (466)
T cd07138         309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVL  379 (466)
T ss_pred             CCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-cCCCCceECCEEecCCCCCChHHhCCCCCceE
Confidence            999999999999999999999999999999999973211 12469999999999999999999999999985

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=1.4e-77  Score=621.77  Aligned_cols=381  Identities=28%  Similarity=0.432  Sum_probs=349.8

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-HHh-hcCHHHHHHHHHHHHHHHHHh
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWA-KSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      +++++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+ .+|..+|.++|+++++.|++|
T Consensus         5 ~~~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~   84 (481)
T cd07143           5 QPTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERN   84 (481)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHh
Confidence            345789999999887778899999999999999999999999999999999998 599 999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+|||..++...|+..+++.++++++...+.... ..+..   .....+++++|+|||++|+|||||+..
T Consensus        85 ~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~  160 (481)
T cd07143          85 LDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQ-VIETD---IKKLTYTRHEPIGVCGQIIPWNFPLLM  160 (481)
T ss_pred             HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEecceeEEEECCCcChHHH
Confidence            99999999999999997765679999999999999887654222 11111   123567899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+++|.++..+.+++.    ++|+|+|++|+++|++ +.++.|+.  .+|+|+||||+.+|
T Consensus       161 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~----~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G  236 (481)
T cd07143         161 CAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIP----EAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVG  236 (481)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHH----hcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHH
Confidence            99999999999999999999999999987777655    5999999999999965 67888887  89999999999999


Q ss_pred             HHHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      +.|++.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.+++++++
T Consensus       237 ~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  316 (481)
T cd07143         237 RKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLK  316 (481)
T ss_pred             HHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcC
Confidence            999999985 7999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.++++++||++++.++++++++|++++++||++++||.+.    ...|+|++|||+.+++++|++++||+||||+
T Consensus       317 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  391 (481)
T cd07143         317 VGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVV  391 (481)
T ss_pred             CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeE
Confidence            99999999999999999999999999999999999999999852    2368999999999999999999999999985

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=9.8e-78  Score=627.60  Aligned_cols=380  Identities=21%  Similarity=0.289  Sum_probs=347.9

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-Hh
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-EH  124 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~-~~  124 (439)
                      ..+.+||+|+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+ ++
T Consensus        30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~  108 (533)
T TIGR01236        30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPY  108 (533)
T ss_pred             eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhc
Confidence            55678999999875 456899999997 8999999999999999999999999999999999999999999999999 59


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeec-cEEEEEcCCCcchh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFH  203 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N~P~~  203 (439)
                      +++|++++++|+||+..+++..++..+++.++|++..++++.........   .+..+++.++|+ |||++|+|||||+.
T Consensus       109 ~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~---~~~~~~~~~~P~~GVv~~I~PwN~P~~  185 (533)
T TIGR01236       109 REEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESA---PGEWNRTDYRPLEGFVYAISPFNFTAI  185 (533)
T ss_pred             HHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCC---CCceeEEEEecCCCEEEEEeCCchHHH
Confidence            99999999999999999986445999999999999887766443221111   234578899999 99999999999999


Q ss_pred             hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHH
Q 013608          204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV  280 (439)
Q Consensus       204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~  280 (439)
                      ...+++++|| +||+||+|||+++|+++..+.+++.+    +|+|+|++|+|+|++ +.++.|+.  ++++|+||||+.+
T Consensus       186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~  260 (533)
T TIGR01236       186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTAT  260 (533)
T ss_pred             HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHH
Confidence            9999999999 89999999999999999988877655    999999999999964 77888887  9999999999999


Q ss_pred             HHHHHHHhhccCCc------eEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHH
Q 013608          281 GRMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK  354 (439)
Q Consensus       281 ~~~v~~~aa~~l~p------v~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~  354 (439)
                      |+.|++.++++++|      +++|+|||||+||++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++
T Consensus       261 G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~  340 (533)
T TIGR01236       261 FKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLA  340 (533)
T ss_pred             HHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHH
Confidence            99999999999874      999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCC--CEEEeCCCCCCCCCCCCCceeccEEEecCCCCCccccc
Q 013608          355 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG--AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE  432 (439)
Q Consensus       355 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~  432 (439)
                      +++++++|+|.++++++||++++.++++++++|++++++|  |++++||...    ...|+|++|||+.++++||++++|
T Consensus       341 ~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~e  416 (533)
T TIGR01236       341 ELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVE  416 (533)
T ss_pred             HHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcc
Confidence            9999999999999999999999999999999999999987  7999999742    236899999999999999999999


Q ss_pred             CccccCC
Q 013608          433 EIILWVS  439 (439)
Q Consensus       433 E~FgPv~  439 (439)
                      |+||||+
T Consensus       417 E~FGPVl  423 (533)
T TIGR01236       417 EIFGPVL  423 (533)
T ss_pred             cCCCCeE
Confidence            9999985

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.8e-77  Score=621.80  Aligned_cols=380  Identities=27%  Similarity=0.391  Sum_probs=346.7

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      +++||+|+|+.+.++++++++||+||+.+++++.++.+|++.++++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus         1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l   80 (479)
T cd07116           1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML   80 (479)
T ss_pred             CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            35799999998877889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++...|+..+++.++|+++...+.... ..+..   .....+++++|+|||++|+|||||+...+++
T Consensus        81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  156 (479)
T cd07116          81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGS-ISEID---ENTVAYHFHEPLGVVGQIIPWNFPLLMATWK  156 (479)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCe-eecCC---CCceEEEEEeccceEEEECCCchHHHHHHHH
Confidence            9999999999999986679999999999999877653221 11111   1234678999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+++++++    + +|+|++|+++|.+ +.+..|+.  ++|.|+||||+.+|++|+
T Consensus       157 ~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~  231 (479)
T cd07116         157 LAPALAAGNCVVLKPAEQTPASILVLMELIGD----L-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM  231 (479)
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----H-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            99999999999999999999999999988876    4 9999999999854 77888886  999999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCC------CCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDD------VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV  359 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~d------aDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l  359 (439)
                      +.++++++|+++|||||||+||++|      +|++.|++.++++. .|+||.|++++|||||+++||+|+++|.++++++
T Consensus       232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  310 (479)
T cd07116         232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAI  310 (479)
T ss_pred             HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999987      79999999999875 5899999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       360 ~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|+|.++++++||+++++++++++++|++++++||++++||.+..++....|+|++|||+.+++ +|++++||+||||+
T Consensus       311 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl  389 (479)
T cd07116         311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVL  389 (479)
T ss_pred             CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceE
Confidence            99999999999999999999999999999999999999999975432223469999999999874 99999999999985

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=1.1e-77  Score=623.33  Aligned_cols=380  Identities=19%  Similarity=0.241  Sum_probs=338.1

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      +++||+|+|+.+. +++++++||+||+++++++.++ +|+++|+++|++| |+.|+.+++.+|.++|+++++.|++++++
T Consensus         1 ~~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~   78 (513)
T cd07128           1 LQSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED   78 (513)
T ss_pred             CceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3689999998874 5789999999999999999876 7999999999998 79999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc-------ccCCCccccccceeEEEee-ccEEEEEcCCC
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE-------YRSSGRSMIHKKAKVEFHP-LGVVGAIVSWN  199 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~P-lGVv~~i~p~N  199 (439)
                      |+++ ++|+|||+.+++ .|+..+++.++|++.+++++..+.       ..+.... .....+++++| +|||++|+|||
T Consensus        79 la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~~GVv~~I~pwN  155 (513)
T cd07128          79 LYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKD-GTFVGQHILTPRRGVAVHINAFN  155 (513)
T ss_pred             HHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCC-ccccceEEEEecccEEEEECCcc
Confidence            9996 999999999985 799999999999999887765321       1111100 00134678999 59999999999


Q ss_pred             cchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCh-hhHHHHHhCcCEEEEeCC
Q 013608          200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGS  277 (439)
Q Consensus       200 ~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~Gs  277 (439)
                      ||++..++++++||++||+||+|||+.+|+++..+.+++.+    +| +|+|++|+|+|+. +.++.+ ..+|+|+||||
T Consensus       156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aG~lP~gv~~~v~g~~~~~~~~l-~~~d~v~fTGS  230 (513)
T cd07128         156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVE----SGLLPEGALQLICGSVGDLLDHL-GEQDVVAFTGS  230 (513)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCCCCCCcEEEecCChHHHhccc-CCCCEEEEECC
Confidence            99999999999999999999999999999999988887665    89 9999999999864 333332 27899999999


Q ss_pred             hHHHHHHHHHh--hccCCceEEEcCCCceEEecCCCC-----HHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHH
Q 013608          278 PGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS  350 (439)
Q Consensus       278 ~~~~~~v~~~a--a~~l~pv~lelgGk~~~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~  350 (439)
                      +++|++|++.+  +++++|+++|||||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus       231 ~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~  310 (513)
T cd07128         231 AATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIE  310 (513)
T ss_pred             HHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHH
Confidence            99999999985  488999999999999999999999     99999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC---CCCCCCCceeccEEEecCCCC-
Q 013608          351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNHT-  426 (439)
Q Consensus       351 ~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~---~~~~~~g~~~~PTvl~~v~~~-  426 (439)
                      +|+++++++++|+|.++++++|||+++.++++++++|++|+++ |++++||.+..   .+....|+|++|||+.+++++ 
T Consensus       311 ~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~  389 (513)
T cd07128         311 ALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDA  389 (513)
T ss_pred             HHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcc
Confidence            9999999999999999999999999999999999999999988 99999997532   112346999999999999874 


Q ss_pred             -CcccccCccccCC
Q 013608          427 -MKLMQEEIILWVS  439 (439)
Q Consensus       427 -~~i~~~E~FgPv~  439 (439)
                       |++++||+||||+
T Consensus       390 ~~~i~~eE~FGPVl  403 (513)
T cd07128         390 ATAVHDVEAFGPVA  403 (513)
T ss_pred             cchHHhCCCcCCeE
Confidence             8999999999985

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.9e-77  Score=622.01  Aligned_cols=375  Identities=24%  Similarity=0.355  Sum_probs=344.7

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      .+||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   80 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA   80 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence            47899999876 35689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+|||..++. .|+..+++.++++++...++..... +.   ..+...+++|+|+|||++|+|||||+...++++
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  155 (487)
T PRK09457         81 EVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKR-SE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHI  155 (487)
T ss_pred             HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHH
Confidence            999999999999995 7999999999998887766543322 11   123456889999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      ++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|+|+.+.++.|++  .+|+|+||||+.+|++|++.
T Consensus       156 ~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~  231 (487)
T PRK09457        156 VPALLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQ  231 (487)
T ss_pred             HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence            9999999999999999999999988877665    89999999999997688888987  99999999999999999998


Q ss_pred             hhcc-CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhH-HHHHHHHHHHHHhCccCCCC
Q 013608          288 ASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       288 aa~~-l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~-d~f~~~L~~~~~~l~~G~~~  365 (439)
                      ++++ .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+
T Consensus       232 aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~  311 (487)
T PRK09457        232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWD  311 (487)
T ss_pred             HhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCC
Confidence            7765 578999999999999999999999999999999999999999999999999998 99999999999999999996


Q ss_pred             -CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 -AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 -~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                       ++++++|||++.+++++++++|++++++|+++++||...    ..+|+|++|||+ +++++|++++||+||||+
T Consensus       312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl  381 (487)
T PRK09457        312 AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLL  381 (487)
T ss_pred             cCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeE
Confidence             788999999999999999999999999999999998743    246899999999 799999999999999985

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-77  Score=620.16  Aligned_cols=378  Identities=26%  Similarity=0.380  Sum_probs=348.6

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+ +++.++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|
T Consensus         3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l   81 (475)
T PRK13473          3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF   81 (475)
T ss_pred             ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            357999999876 5678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++...|+..+++.+++++...+..... ..+..  ......+++|+|+|||++|+|||||+...+++
T Consensus        82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~  158 (475)
T PRK13473         82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGK-AAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWK  158 (475)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHH
Confidence            9999999999999886569999999999998776654322 11110  12234678999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+.+++.+    + +|+|++|+++|. .+.++.|++  ++|.|+||||+.+|+.|+
T Consensus       159 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~  233 (475)
T PRK13473        159 LAPALAAGNTVVLKPSEITPLTALKLAELAAD----I-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL  233 (475)
T ss_pred             HHHHHhcCCEEEEECCCCChHHHHHHHHHHHH----h-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999988888765    6 999999999994 477888887  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus       234 ~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~  313 (475)
T PRK13473        234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPD  313 (475)
T ss_pred             HHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCC-CEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||+++.++++++++|++++++| |++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  384 (475)
T PRK13473        314 DEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVV  384 (475)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeE
Confidence            99999999999999999999999999999 9999999853    1368999999999999999999999999985

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=3.8e-77  Score=619.03  Aligned_cols=381  Identities=25%  Similarity=0.305  Sum_probs=350.0

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      .+||+|+|+.+.+++.++++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   81 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA   81 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47899999887677899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      ++++.|+|||..++. .|+..+++.++|++...+..... ..+..  ..+...+++++|+|||++|+|||||+...++.+
T Consensus        82 ~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~  157 (477)
T TIGR01722        82 ELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGE-TSTQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMF  157 (477)
T ss_pred             HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHH
Confidence            999999999999985 79999999999998776654322 21111  012345778999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      ++||++||+||+|||+++|+++..+.++++    ++|+|+|++|+|+|+.+.++.|++  .++.|+||||+.+|++|.+.
T Consensus       158 ~~ALaaGN~VilKps~~~p~~~~~l~~~l~----~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~  233 (477)
T TIGR01722       158 PIAIACGNTFVLKPSEKVPSAAVKLAELFS----EAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT  233 (477)
T ss_pred             HHHHhcCCEEEeeCcccChHHHHHHHHHHH----HhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHH
Confidence            999999999999999999999987766655    499999999999997778888887  99999999999999999999


Q ss_pred             hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608          288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG  367 (439)
Q Consensus       288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~  367 (439)
                      ++++++|+++|+|||||+||++|||++.+++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++
T Consensus       234 a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~  312 (477)
T TIGR01722       234 GSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDP  312 (477)
T ss_pred             HHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++||||+++.++++++++|++|+++||++++||.....+....|+|++|||+.+++++|.+++||+||||+
T Consensus       313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  384 (477)
T TIGR01722       313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVL  384 (477)
T ss_pred             CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeE
Confidence            999999999999999999999999999999999986433333568999999999999999999999999985

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=4.5e-77  Score=619.80  Aligned_cols=383  Identities=27%  Similarity=0.466  Sum_probs=350.8

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      +.++||+|+|..+.++.+++++||+||+++++++.++.+|+++++++|++|++. |+++|.++|.++|+++++.|+++++
T Consensus         7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~   86 (484)
T cd07144           7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRD   86 (484)
T ss_pred             CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            456899999988766788999999999999999999999999999999999996 8899999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||+..++...|+..+++.++|++++.++... ...+..   .....++.|+|+|||++|+|||||+...+
T Consensus        87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~  162 (484)
T cd07144          87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQG-KTIPTS---PNKLAYTLHEPYGVCGQIIPWNYPLAMAA  162 (484)
T ss_pred             HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceecCC---CCceEEEEEecceEEEEECcCCCHHHHHH
Confidence            99999999999998876567999999999999998876632 222211   22346789999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+.++++    ++|+|+|++|+|+|++ +.++.|+.  .+|.|+||||+.+|+.
T Consensus       163 ~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~  238 (484)
T cd07144         163 WKLAPALAAGNTVVIKPAENTPLSLLYFANLVK----EAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRL  238 (484)
T ss_pred             HHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHH
Confidence            999999999999999999999999988777765    4999999999999854 67888887  8999999999999999


Q ss_pred             HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh-CccC
Q 013608          284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAG  362 (439)
Q Consensus       284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~-l~~G  362 (439)
                      |++.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.+++++ +++|
T Consensus       239 i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G  318 (484)
T cd07144         239 VMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVG  318 (484)
T ss_pred             HHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985 9999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+++++++|||+++.+++++.++|++++++||++++||...... ...|+|++|||+.+++++|++++||+||||+
T Consensus       319 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~-~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl  394 (484)
T cd07144         319 SPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEG-LGKGYFIPPTIFTDVPQDMRIVKEEIFGPVV  394 (484)
T ss_pred             CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccc-CCCCceECCEEEeCCCCCCchhhCCCCCceE
Confidence            999999999999999999999999999999999999999854211 2368999999999999999999999999985

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=2.9e-77  Score=619.87  Aligned_cols=380  Identities=28%  Similarity=0.393  Sum_probs=351.0

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      +||+|+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.  |+++|..+|.++|+++++.|++|+++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            589999988766778999999999999999999999999999999999985  999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++...|+..+++.++|+++..+++...+..+..   .+...+++|+|+|||++|+|||||+...+++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~  157 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALK  157 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHH
Confidence            9999999999998876679999999999999987765443332221   2345678999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      +++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+++|+.+.+..|++  .++.|.||||+.+|+.|++
T Consensus       158 i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~  233 (471)
T cd07139         158 IAPALAAGCTVVLKPSPETPLDAYLLAEAAE----EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA  233 (471)
T ss_pred             HHHHHhcCCEEEEECCCcCCHHHHHHHHHHH----HcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            9999999999999999999999987776655    599999999999997678888887  7999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~  366 (439)
                      .++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus       234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~  313 (471)
T cd07139         234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLD  313 (471)
T ss_pred             HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|||+++.++++++++|++++++||++++||.....  ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl  384 (471)
T cd07139         314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAG--LDRGWFVEPTLFADVDNDMRIAQEEIFGPVL  384 (471)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEEecCCCcchHHhCccCCCeE
Confidence            9999999999999999999999999999999999975321  2468999999999999999999999999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=5.8e-77  Score=618.67  Aligned_cols=381  Identities=28%  Similarity=0.433  Sum_probs=351.1

Q ss_pred             cccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      +||+|+|+.+.++++++++||+| ++++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|.+++++|+
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela   80 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA   80 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999998876678999999999 68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..++. .|+..+++.++|++...++.. .+..+..  +.....+++++|+|||++|+|||||+...++++
T Consensus        81 ~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~  156 (478)
T cd07131          81 RLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLF-GETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKI  156 (478)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhC-CcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHH
Confidence            999999999999985 699999999999998877642 2222221  122356889999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      ++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|++++.+ +.++.|+.  .+|.|+||||+.+|+.|++
T Consensus       157 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~  232 (478)
T cd07131         157 FPALVCGNTVVFKPAEDTPACALKLVELFA----EAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGE  232 (478)
T ss_pred             HHHHHcCCEEEEECCCcCcHHHHHHHHHHH----hcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            999999999999999999999988777755    4999999999999865 47888887  8999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~  366 (439)
                      .++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+
T Consensus       233 ~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~  312 (478)
T cd07131         233 TCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLD  312 (478)
T ss_pred             HHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++||++++.++++++++|++|+++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl  385 (478)
T cd07131         313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVV  385 (478)
T ss_pred             CCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeE
Confidence            9999999999999999999999999999999999986543223579999999999999999999999999985

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=5.7e-77  Score=618.13  Aligned_cols=379  Identities=27%  Similarity=0.411  Sum_probs=349.5

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA--KSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      .++||+|+|+.+.++..++++||+||+++++++.++.+|++.++++|++||+.|+  +++.++|.++|+++++.|.++++
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            4679999998876778999999999999999999999999999999999999854  99999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||+..++...|+..+++.++++++..++.... ..+..   .+...+++++|+|||++|+|||||+...+
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  159 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGK-TIPID---GNFLAYTRREPIGVCGQIIPWNFPLLMLA  159 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEeceeEEEEECCCcCHHHHHH
Confidence            999999999999997776679999999999999876654322 11211   23456889999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|.++..+.+++.+    +|+|+|++|+|++++ +.++.|+.  .+|+|+||||+.+|+.
T Consensus       160 ~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~  235 (476)
T cd07091         160 WKLAPALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRT  235 (476)
T ss_pred             HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHH
Confidence            9999999999999999999999999888777655    999999999999854 67788887  8999999999999999


Q ss_pred             HHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          284 IMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       284 v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      |++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       236 v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g  315 (476)
T cd07091         236 IMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG  315 (476)
T ss_pred             HHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCC
Confidence            9999997 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++||++++.+++++.++|++++++||++++||....    ..|+|++|||+.+++++|++++||+||||+
T Consensus       316 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~----~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl  388 (476)
T cd07091         316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHG----SKGYFIQPTVFTDVKDDMKIAKEEIFGPVV  388 (476)
T ss_pred             CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCceECcEEecCCCCCChhhhCCCCCCeE
Confidence            9999999999999999999999999999999999999998531    368999999999999999999999999985

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1e-76  Score=615.51  Aligned_cols=377  Identities=31%  Similarity=0.478  Sum_probs=348.8

Q ss_pred             ccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 013608           52 YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI  131 (439)
Q Consensus        52 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~  131 (439)
                      ||+|+|+.+.+++.++++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~   80 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL   80 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            68999987767789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHH
Q 013608          132 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA  211 (439)
Q Consensus       132 ~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~  211 (439)
                      +++|+||+..+++ .|+..+++.++|++....+..... .+..  ..+...+++++|+|||++|+|||||+...++++++
T Consensus        81 ~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~  156 (468)
T cd07088          81 IVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEI-IPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP  156 (468)
T ss_pred             HHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcc-ccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence            9999999999985 799999999999998776543321 1111  12345678999999999999999999999999999


Q ss_pred             HHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608          212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNA  288 (439)
Q Consensus       212 AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a  288 (439)
                      ||++||+||+|||+.+|+++..+.+++++    +|+|+|++|++++++ +.++.|+.  .+|.|.||||+.+|+.|++.+
T Consensus       157 AL~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a  232 (468)
T cd07088         157 ALVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA  232 (468)
T ss_pred             HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            99999999999999999999888777655    999999999999975 47788887  899999999999999999999


Q ss_pred             hccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCC
Q 013608          289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK  368 (439)
Q Consensus       289 a~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~  368 (439)
                      +++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus       233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  312 (468)
T cd07088         233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAA  312 (468)
T ss_pred             HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       369 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++||++++.++++++++|++++++||++++||....+   ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  380 (468)
T cd07088         313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEG---EKGYFYEPTVLTNVRQDMEIVQEEIFGPVL  380 (468)
T ss_pred             CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC---CCceeEcCEEEecCCCCCchhhCCCcCCeE
Confidence            99999999999999999999999999999999975321   368999999999999999999999999985

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=7.8e-77  Score=620.94  Aligned_cols=379  Identities=25%  Similarity=0.375  Sum_probs=349.6

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      ....+||+|+|+.+  +.+++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~  108 (512)
T cd07124          31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR  108 (512)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence            34568999999864  57899999998 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+||+..++. .|+..+++.++|+++.+.++ .....+..   .+..++++++|+|||++|+|||||+...
T Consensus       109 ~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~  183 (512)
T cd07124         109 FELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRL-RGFPVEMV---PGEDNRYVYRPLGVGAVISPWNFPLAIL  183 (512)
T ss_pred             HHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCccccCC---CCceeEEEEecceEEEEECCCChHHHHH
Confidence            9999999999999999995 69999999999999998876 32222211   2345789999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|+|++ +.++.|+.  ++|+|.||||+.+|+
T Consensus       184 ~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~  259 (512)
T cd07124         184 AGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGL  259 (512)
T ss_pred             HHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHH
Confidence            99999999999999999999999999988777655    899999999999865 67788887  899999999999999


Q ss_pred             HHHHHhhc------cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHH
Q 013608          283 MIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV  356 (439)
Q Consensus       283 ~v~~~aa~------~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~  356 (439)
                      .|++.+++      +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus       260 ~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~  339 (512)
T cd07124         260 RIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERT  339 (512)
T ss_pred             HHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHH
Confidence            99999987      699999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccc
Q 013608          357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIIL  436 (439)
Q Consensus       357 ~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~Fg  436 (439)
                      +++++|+|.++++++||++++.++++++++|+++++ |+++++||....+  .+.|+|++|||+.+++++|++++||+||
T Consensus       340 ~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg  416 (512)
T cd07124         340 KALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFG  416 (512)
T ss_pred             HhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcC
Confidence            999999999999999999999999999999999998 8999999985422  1479999999999999999999999999


Q ss_pred             cCC
Q 013608          437 WVS  439 (439)
Q Consensus       437 Pv~  439 (439)
                      ||+
T Consensus       417 Pvl  419 (512)
T cd07124         417 PVL  419 (512)
T ss_pred             CeE
Confidence            985

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=8.9e-77  Score=614.64  Aligned_cols=378  Identities=27%  Similarity=0.407  Sum_probs=350.9

Q ss_pred             CCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 013608           40 DDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK  119 (439)
Q Consensus        40 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~  119 (439)
                      .|-......+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++
T Consensus        13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~   92 (480)
T cd07111          13 AWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIAR   92 (480)
T ss_pred             HHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence            46666666778999999998766788999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCC
Q 013608          120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN  199 (439)
Q Consensus       120 ~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N  199 (439)
                      .|++++++|++++++|+||+..+++..|+..+++.++++........              .....++|+|||++|+|||
T Consensus        93 ~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN  158 (480)
T cd07111          93 HIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWN  158 (480)
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCcccceecceEEEECCCc
Confidence            99999999999999999999999976799999999988876654321              1234579999999999999


Q ss_pred             cchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCC
Q 013608          200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGS  277 (439)
Q Consensus       200 ~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs  277 (439)
                      ||+...++++++||++||+||+|||+.+|+++..+.++++    ++|+|+|++|+|+|+.+.+..|+.  .+|.|.||||
T Consensus       159 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs  234 (480)
T cd07111         159 FPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICA----EAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGS  234 (480)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----hcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECC
Confidence            9999999999999999999999999999999988777755    499999999999987777888887  7999999999


Q ss_pred             hHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          278 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       278 ~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      +.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus       235 ~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~  314 (480)
T cd07111         235 TEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS  314 (480)
T ss_pred             HHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++|+|.++++++||++++.++++++++|++++++|+++++||...    ...|+|++|||+.+++++|++++||+|||
T Consensus       315 ~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP  390 (480)
T cd07111         315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGP  390 (480)
T ss_pred             hcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCC
Confidence            99999999999999999999999999999999999999999998742    23689999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       391 vl  392 (480)
T cd07111         391 VL  392 (480)
T ss_pred             ee
Confidence            85

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=1.4e-76  Score=613.83  Aligned_cols=371  Identities=52%  Similarity=0.862  Sum_probs=348.5

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI  148 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei  148 (439)
                      +||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~   80 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI   80 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999977899


Q ss_pred             HHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCch
Q 013608          149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS  228 (439)
Q Consensus       149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~  228 (439)
                      ..+++.++|++++.++.+.+...+.+....+...+++++|+|||++|+|||||++.++.++++||++||+||+|||+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p  160 (465)
T cd07098          81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA  160 (465)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence            99999999999988876665444443222345678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEE
Q 013608          229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI  306 (439)
Q Consensus       229 ~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~i  306 (439)
                      +++..++++++++|.++|+|+|++|+++++.+.++.|+.  .++.|.||||+.+|++|.+.++++++|+++|+||||++|
T Consensus       161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i  240 (465)
T cd07098         161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI  240 (465)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence            999999999999999999999999999997788888887  899999999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHH
Q 013608          307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL  386 (439)
Q Consensus       307 V~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~  386 (439)
                      |++|+|++.+++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++++++
T Consensus       241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~  320 (465)
T cd07098         241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL  320 (465)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |++++++||++++||.....+..+.|+|++|||+.+++++|++++||+||||+
T Consensus       321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  373 (465)
T cd07098         321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVM  373 (465)
T ss_pred             HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeE
Confidence            99999999999999975433323479999999999999999999999999985

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=1.5e-76  Score=618.38  Aligned_cols=377  Identities=24%  Similarity=0.376  Sum_probs=347.7

Q ss_pred             CcccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ..++||+|+|+.+  +.+++++||+ ||+++++++.++.+|++.++++|++|++.|+++|+++|.++|+++++.|+++++
T Consensus        32 ~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~  109 (511)
T TIGR01237        32 TYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRH  109 (511)
T ss_pred             ccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence            3457999999875  4579999999 599999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+|||..++. .|+..+++.++|++++++++.+... +..  ..+..++++++|+|||++|+|||||+..++
T Consensus       110 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~  185 (511)
T TIGR01237       110 ELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGV-NLD--IEGETNRYFYQPRGVAVVISPWNFPMAIAV  185 (511)
T ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cCC--CCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence            999999999999999985 6999999999999999887654321 111  134567889999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|+|++ +.++.|++  .++.|.||||+.+|+.
T Consensus       186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~  261 (511)
T TIGR01237       186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCR  261 (511)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHH
Confidence            9999999999999999999999999888777655    899999999999964 78888987  8999999999999999


Q ss_pred             HHHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       284 v~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |++.++      ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++
T Consensus       262 i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~  341 (511)
T TIGR01237       262 IYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATR  341 (511)
T ss_pred             HHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHH
Confidence            999988      58999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++|+|.++++++||++++.++++++++|++++++| ++++||...    ...|+|++|||+.+++++|++++||+|||
T Consensus       342 ~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP  416 (511)
T TIGR01237       342 SLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDA----PSEGYFIGPTIFKDVDRHARLAQEEIFGP  416 (511)
T ss_pred             hCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccC----CCCCeEEcCEEEeCCCCCChHhhCCCcCC
Confidence            9999999999999999999999999999999999999 899998742    24689999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       417 Vl  418 (511)
T TIGR01237       417 VV  418 (511)
T ss_pred             eE
Confidence            85

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=2.3e-76  Score=611.64  Aligned_cols=370  Identities=30%  Similarity=0.439  Sum_probs=339.5

Q ss_pred             CcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 013608           55 PRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR  134 (439)
Q Consensus        55 g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~  134 (439)
                      |+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|++++++|++++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~   80 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR   80 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            45666656678999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHH
Q 013608          135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF  214 (439)
Q Consensus       135 d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~  214 (439)
                      |+||+..++. .|+..+++.++|+++...+. .....+..  ..+...+++++|+|||++|+|||||+...++++++||+
T Consensus        81 e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa  156 (465)
T cd07151          81 ESGSTRIKAN-IEWGAAMAITREAATFPLRM-EGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALA  156 (465)
T ss_pred             HcCCCHHHHH-HHHHHHHHHHHHHHHhHHHh-cCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHH
Confidence            9999999985 69999999999999876554 22222211  12345678999999999999999999999999999999


Q ss_pred             hCCEEEEecCCCchHHH-HHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhc
Q 013608          215 SGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK  290 (439)
Q Consensus       215 aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~  290 (439)
                      +||+||+|||+.+|.++ ..+.    ++|.++|+|+|++|+++|++ +.++.|++  .+++|.||||+.+|+.|++.+++
T Consensus       157 aGN~Vi~Kps~~~p~~~~~~l~----~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~  232 (465)
T cd07151         157 LGNAVVLKPASDTPITGGLLLA----KIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR  232 (465)
T ss_pred             cCCEEEEECCCCCcHhHHHHHH----HHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence            99999999999999986 4444    45556999999999999864 67788887  79999999999999999999999


Q ss_pred             cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCc
Q 013608          291 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD  370 (439)
Q Consensus       291 ~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~  370 (439)
                      +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++++
T Consensus       233 ~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  312 (465)
T cd07151         233 HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTV  312 (465)
T ss_pred             cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          371 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       371 ~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|||+++.++++++++|++++++||++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  374 (465)
T cd07151         313 VGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIFGPVA  374 (465)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCC-------cCCEEEccEEEeCCCCCCchhhCcCcCCeE
Confidence            99999999999999999999999999999997       258999999999999999999999999985

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=1.8e-76  Score=609.66  Aligned_cols=360  Identities=31%  Similarity=0.521  Sum_probs=334.2

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||+||+++++++.++.+|++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++ +|
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e   79 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GE   79 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999984 79


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|++...++..... .+..  ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~  156 (448)
T TIGR01780        80 ILYAASFLEWFAEEAKRVYGDT-IPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQT  156 (448)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcc-ccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccc
Confidence            9999999999998777654321 1211  122345678899999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-h-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      |+++..+.+++++    +|+|+|++|+++|+ + +.++.|++  +++.|+||||+.+|++|++.++++++|+++|+||||
T Consensus       157 p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~  232 (448)
T TIGR01780       157 PLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNA  232 (448)
T ss_pred             hHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCC
Confidence            9999988887654    99999999999996 3 67788887  899999999999999999999999999999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      |+||++|+|++.+++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++|||+++.+++++
T Consensus       233 ~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v  312 (448)
T TIGR01780       233 PFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKV  312 (448)
T ss_pred             eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|++++++||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~i~~a~~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl  364 (448)
T TIGR01780       313 EKHIADAVEKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLA  364 (448)
T ss_pred             HHHHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceE
Confidence            999999999999999999742    1368999999999999999999999999985

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-76  Score=615.80  Aligned_cols=376  Identities=24%  Similarity=0.377  Sum_probs=346.7

Q ss_pred             CcccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...+||+|+|+.+  +++++++||+ ||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|+++++
T Consensus        36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~  113 (514)
T PRK03137         36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKH  113 (514)
T ss_pred             ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence            3457999999875  5689999999 699999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+|||..+++ .|+..+++.++|+++++.++........   ..+..++++++|+|||++|+|||||+..++
T Consensus       114 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~  189 (514)
T PRK03137        114 EFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMA  189 (514)
T ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence            999999999999999995 6999999999999998877643332211   133467899999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+++|++ +.++.|++  ++++|.||||+.+|+.
T Consensus       190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~  265 (514)
T PRK03137        190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLR  265 (514)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHH
Confidence            9999999999999999999999999887777654    899999999999865 67888887  8999999999999999


Q ss_pred             HHHHhhc------cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          284 IMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       284 v~~~aa~------~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |++.+++      +++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus       266 i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~  345 (514)
T PRK03137        266 IYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTK  345 (514)
T ss_pred             HHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHH
Confidence            9999987      7899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++|+|.++. ++||++++.++++++++|++++++ +++++||...    ...|+|++|||+.+++++|++++||+|||
T Consensus       346 ~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgP  419 (514)
T PRK03137        346 ELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGP  419 (514)
T ss_pred             hCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCc
Confidence            99999999988 999999999999999999999987 5999999742    23689999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       420 vl  421 (514)
T PRK03137        420 VV  421 (514)
T ss_pred             eE
Confidence            85

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=4.2e-76  Score=613.81  Aligned_cols=383  Identities=22%  Similarity=0.328  Sum_probs=351.1

Q ss_pred             CCCCCCcccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 013608           43 NQTPDNSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI  121 (439)
Q Consensus        43 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l  121 (439)
                      ++......+||+|+|+.+  +..++++||. ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|
T Consensus        13 ~~~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l   90 (500)
T cd07083          13 EEFGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLL   90 (500)
T ss_pred             hhccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            333455668999999874  5679999997 6999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcc
Q 013608          122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP  201 (439)
Q Consensus       122 ~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P  201 (439)
                      ++++++|++++++|+||+..++ ..|+..+++.++++++.+.++........+  ..+..++++++|+|||++|+|||||
T Consensus        91 ~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P  167 (500)
T cd07083          91 RRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFP  167 (500)
T ss_pred             HhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccH
Confidence            9999999999999999999997 579999999999999998876543321111  1234578899999999999999999


Q ss_pred             hhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCCh
Q 013608          202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP  278 (439)
Q Consensus       202 ~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~  278 (439)
                      +...++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+++|++ +.++.|++  .+|+|+||||+
T Consensus       168 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~  243 (500)
T cd07083         168 VAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSL  243 (500)
T ss_pred             HHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcH
Confidence            999999999999999999999999999999988887665    899999999999964 67888887  99999999999


Q ss_pred             HHHHHHHHHhhccC------CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHH
Q 013608          279 GVGRMIMRNASKTL------TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV  352 (439)
Q Consensus       279 ~~~~~v~~~aa~~l------~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L  352 (439)
                      .+|+.|.+.+++++      +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       244 ~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l  323 (500)
T cd07083         244 ETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERL  323 (500)
T ss_pred             HHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHH
Confidence            99999999999886      999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCccccc
Q 013608          353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE  432 (439)
Q Consensus       353 ~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~  432 (439)
                      +++++++++|+|.++++++||+++++++++++++|++++++| ++++||...    ...|+|++|||+.+++++|++++|
T Consensus       324 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~e  398 (500)
T cd07083         324 LKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQE  398 (500)
T ss_pred             HHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhC
Confidence            999999999999999999999999999999999999999988 999999743    136899999999999999999999


Q ss_pred             CccccCC
Q 013608          433 EIILWVS  439 (439)
Q Consensus       433 E~FgPv~  439 (439)
                      |+||||+
T Consensus       399 E~FgPvl  405 (500)
T cd07083         399 EIFGPVL  405 (500)
T ss_pred             CCCCceE
Confidence            9999985

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=2.4e-76  Score=629.66  Aligned_cols=375  Identities=22%  Similarity=0.283  Sum_probs=337.2

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .++||+|+|+.+. +++++++||+||+++++++.++ +|+++++++|++| |+.|+++|..+|.++|+++++.|++++++
T Consensus         1 ~~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~e   78 (663)
T TIGR02278         1 LQSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEA   78 (663)
T ss_pred             CceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3689999998864 5689999999999999999999 5999999999996 99999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCC-------cccCCCccccccceeEEEeec-cEEEEEcCCC
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP-------EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWN  199 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N  199 (439)
                      |++ +++|+|||+.+++ .|+..+++.++|+++.+++.+.+       +..+... ......+++|+|+ |||++|+|||
T Consensus        79 la~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~Gvv~~I~pwN  155 (663)
T TIGR02278        79 LYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSK-DGSFQGRHILTPKGGVAVQINAFN  155 (663)
T ss_pred             HHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCC-CCccceEEEEEeCCceEEEEcCCc
Confidence            999 5999999999985 79999999999999988764321       1111110 0112467899998 9999999999


Q ss_pred             cchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCChhhHHHHH--hCcCEEEEeC
Q 013608          200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALV--SSVDKIIFVG  276 (439)
Q Consensus       200 ~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~~~~~~L~--~~v~~v~f~G  276 (439)
                      ||+..+++++++||++||+||+|||+.+|+++.++.+++.+    +| +|+|++|+|+|+.  +..+.  ..+|+|+|||
T Consensus       156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~----aG~lP~gv~~~v~g~~--~~~~~~~~~~~~V~FTG  229 (663)
T TIGR02278       156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVE----SGLLPEGSLQLICGSA--GDLLDHLDHRDVVAFTG  229 (663)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCCCCcEEEEeCCh--HHHHhcCCCCCEEEEEC
Confidence            99999999999999999999999999999999988877665    89 9999999999853  22222  2789999999


Q ss_pred             ChHHHHHHHHHh--hccCCceEEEcCCCceEEecCCCC-----HHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHH
Q 013608          277 SPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV  349 (439)
Q Consensus       277 s~~~~~~v~~~a--a~~l~pv~lelgGk~~~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~  349 (439)
                      |+++|++|++.+  +++++|+++|||||||+||++|||     ++.|++.+++|+|.|+||.|++++|||||+++||+|+
T Consensus       230 S~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~  309 (663)
T TIGR02278       230 SAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVL  309 (663)
T ss_pred             CHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHH
Confidence            999999999974  488999999999999999999999     9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCC-c
Q 013608          350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM-K  428 (439)
Q Consensus       350 ~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~-~  428 (439)
                      ++|.++++++++|+|.++++++||||++.++++++++|++|+++||++++||.+.     ..|+|++|||+.+++++| +
T Consensus       310 ~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-----~~g~~~~PTvl~~~~~~~~~  384 (663)
T TIGR02278       310 KALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-----LDGAFFPPTLLLAEDPWAGA  384 (663)
T ss_pred             HHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-----CCCeeEccEEEeeCCcchhh
Confidence            9999999999999999999999999999999999999999999999999999742     358999999999999886 7


Q ss_pred             ccccCccccCC
Q 013608          429 LMQEEIILWVS  439 (439)
Q Consensus       429 i~~~E~FgPv~  439 (439)
                      +++||+||||+
T Consensus       385 i~~eE~FGPVl  395 (663)
T TIGR02278       385 VHATEAFGPVA  395 (663)
T ss_pred             HHhccccCCeE
Confidence            99999999985

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=7.1e-76  Score=610.18  Aligned_cols=374  Identities=24%  Similarity=0.364  Sum_probs=341.7

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE  130 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~  130 (439)
                      +||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   79 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR   79 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            5799999876 467899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHH
Q 013608          131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML  210 (439)
Q Consensus       131 ~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~  210 (439)
                      ++++|+||+..++. .|+..+++.++|++.+..+........    ......+++++|+|||++|+|||||+...+++++
T Consensus        80 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~  154 (484)
T TIGR03240        80 VIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENP----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIV  154 (484)
T ss_pred             HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC----CCCceeEEEEecccEEEEECCCchHHHHHHHHHH
Confidence            99999999999985 799999999999887766543321111    1223467889999999999999999999999999


Q ss_pred             HHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608          211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNA  288 (439)
Q Consensus       211 ~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a  288 (439)
                      +||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+|+|+.+.++.|+.  .+|+|+||||+++|++|++.+
T Consensus       155 ~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~a  230 (484)
T TIGR03240       155 PALLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQF  230 (484)
T ss_pred             HHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence            999999999999999999999988887665    89999999999997678888887  899999999999999999988


Q ss_pred             hcc-CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhH-HHHHHHHHHHHHhCccCCC-C
Q 013608          289 SKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPP-L  365 (439)
Q Consensus       289 a~~-l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~-d~f~~~L~~~~~~l~~G~~-~  365 (439)
                      +++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|++ .
T Consensus       231 a~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~  310 (484)
T TIGR03240       231 AGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDA  310 (484)
T ss_pred             hhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCc
Confidence            765 688999999999999999999999999999999999999999999999999985 9999999999999999997 4


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||++..++++++++|++++++||++++||...    ...|+|++|||+ +++++|++++||+||||+
T Consensus       311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl  379 (484)
T TIGR03240       311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLL  379 (484)
T ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeE
Confidence            778899999999999999999999999999999998743    235789999999 799999999999999985

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.2e-75  Score=612.80  Aligned_cols=380  Identities=30%  Similarity=0.462  Sum_probs=349.1

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..++|.+.+  +.++++++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|
T Consensus        19 ~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el   96 (524)
T PRK09407         19 LRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL   96 (524)
T ss_pred             HHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            445556544  446789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++ ..|+..+++.++|+++++.+++.++....... .....+++++|+|||++|+|||||+...+++
T Consensus        97 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~  174 (524)
T PRK09407         97 LDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPWNYPLTLAVSD  174 (524)
T ss_pred             HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCCCChHHHHHHH
Confidence            999999999999988 57999999999999999888776554322111 1245788999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHhCcCEEEEeCChHHHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      +++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+++|++ +.++.|++.+|.|+||||+.+|++|++.
T Consensus       175 ~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~  250 (524)
T PRK09407        175 AIPALLAGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQ  250 (524)
T ss_pred             HHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999988877654    999999999999965 6788888889999999999999999999


Q ss_pred             hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608          288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG  367 (439)
Q Consensus       288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~  367 (439)
                      ++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus       251 aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~  330 (524)
T PRK09407        251 AGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY  330 (524)
T ss_pred             HHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|||++++++++++++|++++++||++++||....   ...|+|++|||+.+++++|++++||+||||+
T Consensus       331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl  399 (524)
T PRK09407        331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVV  399 (524)
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeE
Confidence            99999999999999999999999999999999997421   1258999999999999999999999999985

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=7e-76  Score=610.44  Aligned_cols=377  Identities=26%  Similarity=0.421  Sum_probs=348.2

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.+|..+|.++|+++++.|+++++
T Consensus        20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   99 (494)
T PRK09847         20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE   99 (494)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            4579999998877788999999999999999999999999999999999997  59999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+|||..++...|+..+++.++|+++.++++.... .+..   .....+++++|+|||++|+|||||+..++
T Consensus       100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  175 (494)
T PRK09847        100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV-ATTS---SHELAMIVREPVGVIAAIVPWNFPLLLTC  175 (494)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC---CCceeEEEecceeEEEEECCCccHHHHHH
Confidence            9999999999999988866799999999999999887764432 2211   22345789999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|.++..++++++    ++|+|+|++|+++|.+ +.+..|+.  .+|.|+||||+.+|++
T Consensus       176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~  251 (494)
T PRK09847        176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAK----EAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQ  251 (494)
T ss_pred             HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHH----HcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence            999999999999999999999999988877655    4999999999999864 67888887  8999999999999999


Q ss_pred             HHHHhh-ccCCceEEEcCCCceEEecCCC-CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          284 IMRNAS-KTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       284 v~~~aa-~~l~pv~lelgGk~~~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      |.+.++ ++++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       252 v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  331 (494)
T PRK09847        252 LLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP  331 (494)
T ss_pred             HHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence            999988 5899999999999999999997 99999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++||++++.++++++++|++++++| ++++||...     ..|.|++|||+.+++++|++++||+||||+
T Consensus       332 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-----~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl  403 (494)
T PRK09847        332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-----GLAAAIGPTIFVDVDPNASLSREEIFGPVL  403 (494)
T ss_pred             CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-----CCCceEeeEEEeCCCCCChHHhCcCcCceE
Confidence            999999999999999999999999999999999 999999741     357899999999999999999999999985

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=6e-76  Score=604.49  Aligned_cols=345  Identities=26%  Similarity=0.401  Sum_probs=320.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhh
Q 013608           83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG  162 (439)
Q Consensus        83 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~  162 (439)
                      -...|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.++|+++++
T Consensus         7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~   86 (484)
T PLN02174          7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL   86 (484)
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999987679999999999999999


Q ss_pred             hhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHH
Q 013608          163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL  242 (439)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l  242 (439)
                      +++..+..............+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.+  
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~--  164 (484)
T PLN02174         87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ--  164 (484)
T ss_pred             HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH--
Confidence            988775443332222234578999999999999999999999999999999999999999999999999988887654  


Q ss_pred             HhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHH
Q 013608          243 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV  321 (439)
Q Consensus       243 ~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~  321 (439)
                         ++|+|++|+|+|.++.+..|+. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|+|++.|++.++
T Consensus       165 ---~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~  241 (484)
T PLN02174        165 ---YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRII  241 (484)
T ss_pred             ---hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence               6999999999997777888887 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHH-hccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608          322 RAAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR  400 (439)
Q Consensus       322 ~~~f-~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g  400 (439)
                      +|+| .|+||.|++++|||||+++||+|+++|.++++++++|+|.+ ++++|||+++.++++++++|+++ ++||++++|
T Consensus       242 ~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~G  319 (484)
T PLN02174        242 AGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYG  319 (484)
T ss_pred             HHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEEC
Confidence            9999 59999999999999999999999999999999999999987 78999999999999999999998 889999999


Q ss_pred             CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |..     ...|+|++|||+.++++||++++||+||||+
T Consensus       320 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  353 (484)
T PLN02174        320 GEK-----DRENLKIAPTILLDVPLDSLIMSEEIFGPLL  353 (484)
T ss_pred             CCc-----CCCCCEEEEEEEecCCCCChhhcCCcCCCeE
Confidence            974     1368999999999999999999999999985

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-75  Score=608.01  Aligned_cols=377  Identities=28%  Similarity=0.375  Sum_probs=344.0

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus        14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~   93 (496)
T PLN00412         14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA   93 (496)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            34568999999987677889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCccc-CCC-cc--ccccceeEEEeeccEEEEEcCCCcch
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR-SSG-RS--MIHKKAKVEFHPLGVVGAIVSWNYPF  202 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~-~~~-~~--~~~~~~~~~~~PlGVv~~i~p~N~P~  202 (439)
                      +|++++++|+||+..++. .|+..+++.++|+++++.+++..... +.. ..  ......+++++|+|||++|+|||||+
T Consensus        94 el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~  172 (496)
T PLN00412         94 PIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV  172 (496)
T ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchH
Confidence            999999999999999984 79999999999999887766543211 110 00  01223568899999999999999999


Q ss_pred             hhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChH
Q 013608          203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       203 ~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      ...++++++||++||+||+|||+.+|.++..+++++.    ++|+|+|++|+++++. +.++.|+.  .+|.|.|||| .
T Consensus       173 ~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~----~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~  247 (496)
T PLN00412        173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-D  247 (496)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHH----HhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-H
Confidence            9999999999999999999999999999988777665    4899999999999865 67788887  7999999999 9


Q ss_pred             HHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhC
Q 013608          280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV  359 (439)
Q Consensus       280 ~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l  359 (439)
                      +|++|++.++  ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++
T Consensus       248 ~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~  325 (496)
T PLN00412        248 TGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKL  325 (496)
T ss_pred             HHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence            9999999886  89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       360 ~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|+|.+ ++++||++++.+++++.++|++++++||++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       326 ~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl  397 (496)
T PLN00412        326 TVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVL  397 (496)
T ss_pred             ccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeE
Confidence            9999976 78999999999999999999999999999999876       368999999999999999999999999985

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=1.9e-75  Score=603.38  Aligned_cols=362  Identities=31%  Similarity=0.524  Sum_probs=337.3

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI  148 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei  148 (439)
                      .||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++|+++|++++++|+||+..++ .+|+
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev   79 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHA-FEEV   79 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHH
Confidence            389999999999999999999999999999999999999999999999999999999999999999999999998 5799


Q ss_pred             HHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCch
Q 013608          149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS  228 (439)
Q Consensus       149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~  228 (439)
                      ..+++.++|++++..+++.+...+.... .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  158 (454)
T cd07101          80 LDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA  158 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            9999999999999888877654433211 224678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEe
Q 013608          229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV  307 (439)
Q Consensus       229 ~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV  307 (439)
                      +++..+.+++.+    +|+|+|++|+++|++ +.++.|++.+|.|.||||+.+|++|++.++++++|+++|||||||+||
T Consensus       159 ~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV  234 (454)
T cd07101         159 LTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIV  234 (454)
T ss_pred             HHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEE
Confidence            999887777654    999999999999965 678888888899999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013608          308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV  387 (439)
Q Consensus       308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i  387 (439)
                      ++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++++++++++++|
T Consensus       235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v  314 (454)
T cd07101         235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV  314 (454)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       388 ~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++||++++||...  + ...|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~a~~~Ga~vl~gg~~~--~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl  363 (454)
T cd07101         315 DDAVAKGATVLAGGRAR--P-DLGPYFYEPTVLTGVTEDMELFAEETFGPVV  363 (454)
T ss_pred             HHHHHCCCEEEeCCCCC--C-CCCCeEEcCEEEeCCCCCCHHHhCCCCCceE
Confidence            99999999999999742  1 1358999999999999999999999999985

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=1.6e-75  Score=604.45  Aligned_cols=365  Identities=29%  Similarity=0.457  Sum_probs=336.6

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e   79 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WD   79 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999984 69


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|+++..+++.............+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~  159 (456)
T cd07110          80 VDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELT  159 (456)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccc
Confidence            99999999999998877632111111111123467899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA  304 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~  304 (439)
                      |+++..+.+++++    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|++|++.++++++|+++|+|||||
T Consensus       160 p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~  235 (456)
T cd07110         160 SLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSP  235 (456)
T ss_pred             hHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCe
Confidence            9999988887765    899999999999965 57888887  8999999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHH
Q 013608          305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ  384 (439)
Q Consensus       305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~  384 (439)
                      +||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++++
T Consensus       236 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~  315 (456)
T cd07110         236 IIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVL  315 (456)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|++++++||++++||.....  ...|+|++|||+.+++++|+++++|+||||+
T Consensus       316 ~~v~~a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl  368 (456)
T cd07110         316 SFIARGKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVL  368 (456)
T ss_pred             HHHHHHHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeE
Confidence            9999999999999999985422  2468999999999999999999999999985

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=1.5e-75  Score=604.49  Aligned_cols=362  Identities=30%  Similarity=0.435  Sum_probs=335.2

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+..++ .+|
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~e   79 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAM-LGD   79 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHH
Confidence            4799999999999999999999999999999999999999999999999999999999999999999999999998 589


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|+++..++ +..+..+.+   .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~a~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~  155 (456)
T cd07107          80 VMVAAALLDYFAGLVTE-LKGETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQA  155 (456)
T ss_pred             HHHHHHHHHHHHHHHHH-hCCccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCC
Confidence            99999999999976654 333333322   13456789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA  304 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~  304 (439)
                      |+++..+.+++++     ++|+|++|+++++. +.++.|++  .+++|.||||+++|++|++.++++++|+++|+|||||
T Consensus       156 p~~~~~l~~~~~~-----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p  230 (456)
T cd07107         156 PLSALRLAELARE-----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA  230 (456)
T ss_pred             hHHHHHHHHHHHH-----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCe
Confidence            9999998888775     38999999999865 57888987  7999999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHH-HhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          305 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       305 ~iV~~daDl~~aa~~i~~~~-f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      +||++|+|++.|++.+++|+ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus       231 ~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v  310 (456)
T cd07107         231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRV  310 (456)
T ss_pred             EEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHH
Confidence            99999999999999999995 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|++|+++||++++||.....+....|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl  366 (456)
T cd07107         311 MHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVL  366 (456)
T ss_pred             HHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceE
Confidence            99999999999999999976443334579999999999999999999999999985

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=4.2e-75  Score=600.95  Aligned_cols=366  Identities=29%  Similarity=0.407  Sum_probs=338.5

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG  146 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~  146 (439)
                      ++||+||+++++++.++.+|+++++++|++|++.|+ ++|..+|.++|+++++.|++++++|++++++|+|||..++...
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   80 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM   80 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence            479999999999999999999999999999999999 9999999999999999999999999999999999999887667


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCCCc-cccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      |+..+++.++|++++..++......+... .......+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  160 (459)
T cd07089          81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP  160 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            99999999999999988765444333211 11235678999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK  302 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk  302 (439)
                      .+|.++..+.+++.+    +|+|+|++|+++|++ +.+..|+.  .++.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus       161 ~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~  236 (459)
T cd07089         161 DTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGK  236 (459)
T ss_pred             CChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCC
Confidence            999999887777665    999999999999966 46888886  89999999999999999999999999999999999


Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      ||+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       237 n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~  316 (459)
T cd07089         237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDR  316 (459)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|++++++|+++++||.....  .+.|+|++|||+.+++++|++++||+||||+
T Consensus       317 v~~~i~~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  371 (459)
T cd07089         317 VEGYIARGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVL  371 (459)
T ss_pred             HHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceE
Confidence            999999999999999999985321  2479999999999999999999999999985

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=3.9e-75  Score=601.75  Aligned_cols=363  Identities=29%  Similarity=0.415  Sum_probs=336.4

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+||+..++ ..|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~e   79 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEA-RVD   79 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHH
Confidence            4799999999999999999999999999999999999999999999999999999999999999999999999888 579


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|+++..++. ..+..+..   .+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~  155 (457)
T cd07090          80 IDSSADCLEYYAGLAPTL-SGEHVPLP---GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFT  155 (457)
T ss_pred             HHHHHHHHHHHHHHHHHh-CCeeeccC---CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcC
Confidence            999999999999887653 22222211   13456889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceE
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF  305 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~  305 (439)
                      |+++..+.+++.+    +|+|+|++|+++++.+.++.|+.  .+|.|+||||+.+|++|++.++++++|+++|+|||||+
T Consensus       156 ~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~  231 (457)
T cd07090         156 PLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPL  231 (457)
T ss_pred             cHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCce
Confidence            9999988777665    99999999999987778888887  79999999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHH
Q 013608          306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN  385 (439)
Q Consensus       306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~  385 (439)
                      ||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+++.++++++.+
T Consensus       232 iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~  311 (457)
T cd07090         232 IIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLG  311 (457)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCEEEeCCCCCCCC-CCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          386 LVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       386 ~i~~a~~~Ga~~l~gG~~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|++++++||++++||.....+ ..+.|+|++|||+.+++++|++++||+||||+
T Consensus       312 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl  366 (457)
T cd07090         312 YIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVM  366 (457)
T ss_pred             HHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeE
Confidence            9999999999999999864321 12468999999999999999999999999985

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-75  Score=606.45  Aligned_cols=382  Identities=18%  Similarity=0.262  Sum_probs=334.7

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHH-HHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ-KVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .++||+|+|+.+. +++++++||+||+++++++. +.+|+++++++|++|+ +.|+++|+.+|.++|+++++.|++++++
T Consensus         5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e   82 (521)
T PRK11903          5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDA   82 (521)
T ss_pred             hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4579999998763 56899999999999999997 8899999999999995 9999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccc-----cccceeEEEee-ccEEEEEcCCCcc
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKAKVEFHP-LGVVGAIVSWNYP  201 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~P-lGVv~~i~p~N~P  201 (439)
                      |++++++|+|||..+++ +|+..+++.++|+++.+...........+...     ......+.|+| +|||++|+|||||
T Consensus        83 la~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P  161 (521)
T PRK11903         83 YYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP  161 (521)
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchH
Confidence            99999999999999995 79999999999999887654321111111000     11234678899 5999999999999


Q ss_pred             hhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCCh-hhHHHHHhCcCEEEEeCChH
Q 013608          202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPG  279 (439)
Q Consensus       202 ~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~Gs~~  279 (439)
                      ++..++++++||++||+||+|||+.+|+++..+.+++.+    +| +|+|++|+++|++ +..+.| ..+|+|.||||+.
T Consensus       162 ~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----ag~lP~gv~~~v~g~~~~~~~~l-~~v~~v~fTGS~~  236 (521)
T PRK11903        162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVA----AGILPAGALSVVCGSSAGLLDHL-QPFDVVSFTGSAE  236 (521)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHH----hCCCCcCceEEeeCCchHHHhcc-cCCCEEEEECCHH
Confidence            999999999999999999999999999999988887665    88 9999999999865 444433 5899999999999


Q ss_pred             HHHHHHHHh--hccCCceEEEcCCCceEEecCCCC-----HHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHH
Q 013608          280 VGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV  352 (439)
Q Consensus       280 ~~~~v~~~a--a~~l~pv~lelgGk~~~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L  352 (439)
                      +|++|++.+  +++++|+++|||||||+||++|+|     ++.+++.+++|+|.|+||.|++++|+|||+++||+|+++|
T Consensus       237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L  316 (521)
T PRK11903        237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL  316 (521)
T ss_pred             HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence            999999965  488999999999999999999999     5999999999999999999999999999999999999999


Q ss_pred             HHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCC--CCCCCceeccEEEecCCC--CCc
Q 013608          353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS--EGAVDQYFPPTVIVNVNH--TMK  428 (439)
Q Consensus       353 ~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~--~~~~g~~~~PTvl~~v~~--~~~  428 (439)
                      +++++++++|+|.++++++|||+++.++++++++|+. .++||++++||.+...+  ...+|+|++|||+.++++  +|.
T Consensus       317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~  395 (521)
T PRK11903        317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA  395 (521)
T ss_pred             HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence            9999999999999999999999999999999999995 45799999999753211  124689999999987654  478


Q ss_pred             ccccCccccCC
Q 013608          429 LMQEEIILWVS  439 (439)
Q Consensus       429 i~~~E~FgPv~  439 (439)
                      +++||+||||+
T Consensus       396 i~~eE~FGPvl  406 (521)
T PRK11903        396 VHDVEVFGPVA  406 (521)
T ss_pred             HHhCcccCCeE
Confidence            99999999985

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=3.9e-75  Score=601.61  Aligned_cols=362  Identities=31%  Similarity=0.491  Sum_probs=334.4

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..+++ 
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   79 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-   79 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence            4689999999999999999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCc--cccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEec
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV  223 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKp  223 (439)
                      .|+..+++.++|+++.... +..+..+...  .......+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        80 ~ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp  158 (456)
T cd07145          80 VEVERTIRLFKLAAEEAKV-LRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKP  158 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence            6999999999999987663 3332222110  011234678899999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcC
Q 013608          224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG  300 (439)
Q Consensus       224 s~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg  300 (439)
                      |+.+|+++..+.+++++    +|+|+|++|+++|++ +.++.|++  .++.|.||||+.+|+.|++.++++++|+++|+|
T Consensus       159 s~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElg  234 (456)
T cd07145         159 SSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELG  234 (456)
T ss_pred             CccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecC
Confidence            99999999888777665    899999999999964 67888887  899999999999999999999999999999999


Q ss_pred             CCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHH
Q 013608          301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS  380 (439)
Q Consensus       301 Gk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~  380 (439)
                      ||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++
T Consensus       235 G~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~  314 (456)
T cd07145         235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAV  314 (456)
T ss_pred             CCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       381 ~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|++++++||++++||..      ..|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~~~~~i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl  367 (456)
T cd07145         315 ERMENLVNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVL  367 (456)
T ss_pred             HHHHHHHHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceE
Confidence            99999999999999999999973      238999999999999999999999999985

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=4.3e-75  Score=600.23  Aligned_cols=360  Identities=23%  Similarity=0.336  Sum_probs=333.3

Q ss_pred             EeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        67 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      +++||.||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+||+..++. 
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   80 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK-   80 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            57899999999999999999999999999999998 5679999999999999999999999999999999999999985 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCcc--ccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEec
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV  223 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKp  223 (439)
                      .|+..+++.++|++++..++..... +.+..  ..+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        81 ~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp  159 (455)
T cd07148          81 VEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKP  159 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeC
Confidence            7999999999999998877644322 21110  12345678999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCC
Q 013608          224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG  301 (439)
Q Consensus       224 s~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgG  301 (439)
                      |+.+|+++..+.+++++    +|+|+|++|+++++.+.++.|++  ++|+|.||||+.+|+.|++.++. .+|+++|+||
T Consensus       160 s~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG  234 (455)
T cd07148         160 ALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGG  234 (455)
T ss_pred             CCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCC
Confidence            99999999988887765    89999999999997788888986  99999999999999999999886 4999999999


Q ss_pred             CceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHH
Q 013608          302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE  381 (439)
Q Consensus       302 k~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~  381 (439)
                      |||+||++|+|++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|||+++.+++
T Consensus       235 ~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~  314 (455)
T cd07148         235 AAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVD  314 (455)
T ss_pred             CCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       382 ~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|++++++||++++||.+      ..|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~~~~i~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl  366 (455)
T cd07148         315 RVEEWVNEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVV  366 (455)
T ss_pred             HHHHHHHHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeE
Confidence            9999999999999999999984      247899999999999999999999999985

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=6.3e-75  Score=599.98  Aligned_cols=362  Identities=36%  Similarity=0.569  Sum_probs=339.1

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI  148 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei  148 (439)
                      +||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|++++++|++++++|+||+..++ ..|+
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ev   79 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADA-GLEV   79 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHH
Confidence            589999999999999999999999999999999999999999999999999999999999999999999999877 5799


Q ss_pred             HHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCch
Q 013608          149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS  228 (439)
Q Consensus       149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~  228 (439)
                      ..+++.++|+++.+.+++..+..+.+....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p  159 (453)
T cd07099          80 LLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            99999999999998887765544433222345678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEe
Q 013608          229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV  307 (439)
Q Consensus       229 ~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV  307 (439)
                      +++..+.+++.+    +|+|+|++|+++|+.+.+..|++ .+|+|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus       160 ~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV  235 (453)
T cd07099         160 LVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV  235 (453)
T ss_pred             HHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence            999887777655    99999999999997788888888 8999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013608          308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV  387 (439)
Q Consensus       308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i  387 (439)
                      ++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++++++++|
T Consensus       236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i  315 (453)
T cd07099         236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV  315 (453)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       388 ~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       316 ~~a~~~ga~~~~gg~~~~----~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl  363 (453)
T cd07099         316 DDAVAKGAKALTGGARSN----GGGPFYEPTVLTDVPHDMDVMREETFGPVL  363 (453)
T ss_pred             HHHHhCCCEEEeCCCcCC----CCCeEEecEEEecCCCCCHHHhCCCcCCee
Confidence            999999999999998531    468999999999999999999999999985

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=8.6e-75  Score=599.91  Aligned_cols=370  Identities=24%  Similarity=0.362  Sum_probs=337.9

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      -+||+|+|..+  +++++++||+||+++++++.++.+|+++++++|++|+   +.++..+|.++|+++++.|++++++|+
T Consensus         5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela   79 (472)
T TIGR03250         5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS   79 (472)
T ss_pred             CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            36899999863  5789999999999999999999999999999999876   578999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCc--cccccceeEEEeec-cEEEEEcCCCcchhhhH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~Pl-GVv~~i~p~N~P~~~~~  206 (439)
                      +++++|+||+..++. .|+..+++.++|++..+.+.... ..+...  .......+++++|+ |||++|+|||||+..++
T Consensus        80 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~  157 (472)
T TIGR03250        80 DLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQ-IFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVA  157 (472)
T ss_pred             HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHH
Confidence            999999999999985 69999999999999887654322 111110  01123457899998 99999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+++|++ +.++.|++  +++.|+||||+.+|+.
T Consensus       158 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~  233 (472)
T TIGR03250       158 HKIAPAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKY  233 (472)
T ss_pred             HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence            9999999999999999999999999887777655    999999999999864 67888987  9999999999999999


Q ss_pred             HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608          284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~  363 (439)
                      |++.++  ++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus       234 i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  311 (472)
T TIGR03250       234 IAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD  311 (472)
T ss_pred             HHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence            999886  799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |.++++++|||+++.++++++++|++++++||++++||..       .|+|++|||+.+++++|++++||+||||+
T Consensus       312 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-------~g~~~~PTvl~~v~~~~~i~~eE~FGPvl  380 (472)
T TIGR03250       312 PMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR-------DGALYAPTVLDRVDPSMTLVREETFGPVS  380 (472)
T ss_pred             CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-------CCEEEcCEEEeCCCCCChHHhCCCcCCeE
Confidence            9999999999999999999999999999999999999972       58999999999999999999999999985

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=1.4e-75  Score=605.76  Aligned_cols=372  Identities=33%  Similarity=0.509  Sum_probs=342.3

Q ss_pred             ccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 013608           57 GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT  136 (439)
Q Consensus        57 ~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~  136 (439)
                      |+.+++ ++++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~   79 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET   79 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence            556654 6799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhC
Q 013608          137 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG  216 (439)
Q Consensus       137 Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aG  216 (439)
                      ||+..+++. |+..+++.++|+++++++ +..+..+..   .+...+++++|+|||++|+|||||+..+++++++||++|
T Consensus        80 Gk~~~~a~~-ev~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaG  154 (462)
T PF00171_consen   80 GKPIAEARG-EVDRAIDFLRYYADAARK-LAGEVLPSD---PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAG  154 (462)
T ss_dssp             TSSHHHHHH-HHHHHHHHHHHHHHHHHH-HTEEEEEES---TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT
T ss_pred             ccccccccc-hhhhhhhhhhhhhhcccc-eehhhcccc---cccccccccccccceeecccccccccccccchhhhhccc
Confidence            999999965 999999999999999888 444443332   456789999999999999999999999999999999999


Q ss_pred             CEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCC
Q 013608          217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT  293 (439)
Q Consensus       217 N~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~  293 (439)
                      |+||+|||+.+|.++..+.+++++    +|+|+|++|+++|++ +.+..|+.  +++.|.||||+.+++.|.+.++++++
T Consensus       155 N~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~  230 (462)
T PF00171_consen  155 NTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLK  230 (462)
T ss_dssp             -EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTS
T ss_pred             ccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccc
Confidence            999999999999999888887776    799999999999954 77889987  99999999999999999999999999


Q ss_pred             ceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccc
Q 013608          294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA  373 (439)
Q Consensus       294 pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp  373 (439)
                      |+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       231 ~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gp  310 (462)
T PF00171_consen  231 PVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGP  310 (462)
T ss_dssp             EEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCH
T ss_pred             cccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       374 li~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++.+++++++++|++++++||++++||. ......+.|+|++|||+.+++++|+++++|+||||+
T Consensus       311 l~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  375 (462)
T PF00171_consen  311 LISKAQRERVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVL  375 (462)
T ss_dssp             CSSHHHHHHHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEE
T ss_pred             cccchhhhhcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999995 222345789999999999999999999999999985

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.6e-75  Score=624.28  Aligned_cols=379  Identities=22%  Similarity=0.282  Sum_probs=336.3

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      +++||+|+|+.+ ++.+++++||+||+++++++.++ +|+++++++|++| |+.|+++++.+|.++|+++++.|++++++
T Consensus         5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e   82 (675)
T PRK11563          5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEE   82 (675)
T ss_pred             ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            468999999886 46789999999999999999988 6999999999998 79999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC-------CcccCCCccccccceeEEEeec-cEEEEEcCCC
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK-------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWN  199 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N  199 (439)
                      |++ +++|+|||..++. .|+..+++.++|++.++++.+.       .+..+... ......++.++|+ |||++|+|||
T Consensus        83 la~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~GVv~~I~PwN  159 (675)
T PRK11563         83 LYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSK-GGTFAGRHILTPLEGVAVHINAFN  159 (675)
T ss_pred             HHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccC-CCcccceEEEeecCceEEEECCCc
Confidence            999 5999999999985 6999999999999998766542       11111110 0112256889997 9999999999


Q ss_pred             cchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCChhhHHHHHh--CcCEEEEeC
Q 013608          200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALVS--SVDKIIFVG  276 (439)
Q Consensus       200 ~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~G  276 (439)
                      ||++.+++++++||++||+||+|||+.+|+++..+.+++.+    +| +|+|++|+|+|+..  +.+..  .+++|.|||
T Consensus       160 fP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~e----aG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTG  233 (675)
T PRK11563        160 FPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVE----SGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTG  233 (675)
T ss_pred             hHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHH----cCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEEC
Confidence            99999999999999999999999999999999988887765    89 99999999998532  22222  799999999


Q ss_pred             ChHHHHHHHHH--hhccCCceEEEcCCCceEEecCCCC-----HHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHH
Q 013608          277 SPGVGRMIMRN--ASKTLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV  349 (439)
Q Consensus       277 s~~~~~~v~~~--aa~~l~pv~lelgGk~~~iV~~daD-----l~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~  349 (439)
                      |+++|++|++.  ++++++|+++|||||||+||++|||     +|.|++.+++|+|.|+||.|++++|+|||+++||+|+
T Consensus       234 S~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~  313 (675)
T PRK11563        234 SAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVI  313 (675)
T ss_pred             cHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHH
Confidence            99999999995  4589999999999999999999995     9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCC-C--CCCCCCCceeccEEEecCCC-
Q 013608          350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-H--LSEGAVDQYFPPTVIVNVNH-  425 (439)
Q Consensus       350 ~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~-~--~~~~~~g~~~~PTvl~~v~~-  425 (439)
                      ++|+++++++++|+|.++++++|||++++++++++++|++|+++ |++++||... .  ++....|+|++|||+.++++ 
T Consensus       314 ~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~  392 (675)
T PRK11563        314 EALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPL  392 (675)
T ss_pred             HHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCch
Confidence            99999999999999999999999999999999999999999999 9999999632 1  22234699999999999998 


Q ss_pred             -CCcccccCccccCC
Q 013608          426 -TMKLMQEEIILWVS  439 (439)
Q Consensus       426 -~~~i~~~E~FgPv~  439 (439)
                       +|++++||+||||+
T Consensus       393 ~~~~i~~eEiFGPVl  407 (675)
T PRK11563        393 EAPAVHDVEAFGPVS  407 (675)
T ss_pred             hhhhHhhccccCCce
Confidence             57999999999995

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=7.2e-75  Score=597.53  Aligned_cols=362  Identities=28%  Similarity=0.362  Sum_probs=333.5

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++||+||+++++++.++.+|++++++.|++||+.  |+. ++.+|.++|++++++|++|+++|++++++|+|||..++. 
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   78 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-   78 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            4799999999999999999999999999999985  998 899999999999999999999999999999999999995 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      +|+..+++.++|+++...+..... .+.   ..+...+++|+|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        79 ~Ev~~~i~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~  154 (455)
T cd07120          79 FEISGAISELRYYAGLARTEAGRM-IEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG  154 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence            699999999999998877653221 111   1224578999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK  302 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk  302 (439)
                      .+|+++..+.++++++   +|+|+|++|++++++ +.++.|++  .++.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus       155 ~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~  231 (455)
T cd07120         155 QTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGK  231 (455)
T ss_pred             CChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence            9999998887776652   699999999999864 67888887  89999999999999999999999999999999999


Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      ||+||++|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++++
T Consensus       232 ~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~  311 (455)
T cd07120         232 TPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDR  311 (455)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|++++++||++++||.+.... ..+|+|++|||+.++++||++++||+||||+
T Consensus       312 ~~~~i~~a~~~ga~~~~~g~~~~~~-~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl  367 (455)
T cd07120         312 VDRMVERAIAAGAEVVLRGGPVTEG-LAKGAFLRPTLLEVDDPDADIVQEEIFGPVL  367 (455)
T ss_pred             HHHHHHHHHHCCCEEEeCCccCccc-CCCCceECCEEEecCCCCChhhhCcCcCceE
Confidence            9999999999999999988653321 3478999999999999999999999999985

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=2.4e-74  Score=595.37  Aligned_cols=361  Identities=30%  Similarity=0.462  Sum_probs=333.6

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWA-KSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG  146 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~  146 (439)
                      ++||+||+++++++.++.+|+++++++|++|++.|. ++|.++|.++|+++++.|++|+++|++++++|+||+..+++ .
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~   79 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-A   79 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-H
Confidence            479999999999999999999999999999999877 99999999999999999999999999999999999999985 7


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN  226 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~  226 (439)
                      |+..+++.++|+++..+++... ..+..   .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        80 ev~~~~~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~  155 (454)
T cd07109          80 DVEAAARYFEYYGGAADKLHGE-TIPLG---PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAED  155 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999887765332 22211   2345789999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       227 ~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      +|+++..+.+++++    +|+|+|++|+++|. .+.++.|++  .+|.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus       156 ~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~  231 (454)
T cd07109         156 APLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKS  231 (454)
T ss_pred             ChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCC
Confidence            99999988776654    99999999999984 477888987  799999999999999999999999999999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      |+||++|+|++.|++.+++|+|.++||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++++++
T Consensus       232 ~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~  310 (454)
T cd07109         232 PQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRV  310 (454)
T ss_pred             ceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999975 6899999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++|++++++||++++||.....+ ...|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~~~i~~a~~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  365 (454)
T cd07109         311 EGFVARARARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVL  365 (454)
T ss_pred             HHHHHHHHhCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceE
Confidence            999999999999999999754332 3579999999999999999999999999985

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=2e-74  Score=595.98  Aligned_cols=359  Identities=28%  Similarity=0.383  Sum_probs=333.9

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++++||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|++++++|++++++|+|||+.++. 
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   79 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-   79 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence            3578999999999999999999999999999999999999999999999999999999999999999999999999884 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      .|+..+++.+++++...++.... ..+..  ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        80 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~  156 (451)
T cd07150          80 FETTFTPELLRAAAGECRRVRGE-TLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSE  156 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCc
Confidence            69999999999999887654322 22211  1234578899999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK  302 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk  302 (439)
                      .+|+++..+.+++.+    +|+|+|++|++++.+ +.++.|+.  .+|+|.||||+.+|+.|++.++++++|+++|+|||
T Consensus       157 ~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~  232 (451)
T cd07150         157 ETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGK  232 (451)
T ss_pred             cCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCC
Confidence            999999887777654    899999999999854 67888886  99999999999999999999999999999999999


Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      ||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       233 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  312 (451)
T cd07150         233 NPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVER  312 (451)
T ss_pred             CeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|++++++|+++++||.       ..|+|++|||+.++++||++++||+||||+
T Consensus       313 v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  362 (451)
T cd07150         313 IKRQVEDAVAKGAKLLTGGK-------YDGNFYQPTVLTDVTPDMRIFREETFGPVT  362 (451)
T ss_pred             HHHHHHHHHhCCCEEEeCCc-------cCCcEEcCEEEeCCCCCCHHHhCCCcCceE
Confidence            99999999999999999997       248899999999999999999999999985

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=2.8e-74  Score=602.12  Aligned_cols=374  Identities=21%  Similarity=0.342  Sum_probs=345.1

Q ss_pred             cccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..-||+|+|+  .++++++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus        33 ~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  110 (518)
T cd07125          33 AIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGE  110 (518)
T ss_pred             cCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            4568999997  3578999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..+++ .|+..+++.++|++++.++++.....+..   .+..++++++|+|||++|+|||||+...++
T Consensus       111 la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~  186 (518)
T cd07125         111 LIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGP---TGELNGLELHGRGVFVCISPWNFPLAIFTG  186 (518)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceeEEEEecccEEEEECCcchHHHHHHH
Confidence            99999999999999985 79999999999999998887654433322   235578899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+++++++ .+..|+.  .+|.|+||||+.++++|
T Consensus       187 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i  262 (518)
T cd07125         187 QIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLI  262 (518)
T ss_pred             HHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            999999999999999999999999888777654    9999999999999764 7888887  89999999999999999


Q ss_pred             HHHhhcc---CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          285 MRNASKT---LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       285 ~~~aa~~---l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      ++.++++   ++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus       263 ~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  342 (518)
T cd07125         263 NRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV  342 (518)
T ss_pred             HHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCc
Confidence            9998855   8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++||++++.++++++++|+++++ ++++++||...    ...|+|++|||+.++  +|++++||+||||+
T Consensus       343 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl  413 (518)
T cd07125         343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPIL  413 (518)
T ss_pred             cCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeE
Confidence            9999999999999999999999999999988 46899998731    126999999999888  99999999999985

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=2.2e-74  Score=594.87  Aligned_cols=360  Identities=28%  Similarity=0.417  Sum_probs=332.6

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG  146 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~  146 (439)
                      +||+||+++++++.++.+|+++++++|++||+.  |+++|.++|.++|+++++.|++|+++|++++++|+|||..++ .+
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~   80 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQA-RG   80 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HH
Confidence            589999999999999999999999999999985  999999999999999999999999999999999999999999 48


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN  226 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~  226 (439)
                      |+..+++.++|++...++... ...+.  .......+++|+|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~  157 (454)
T cd07118          81 EIEGAADLWRYAASLARTLHG-DSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEF  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence            999999999999987654322 11111  112235678999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       227 ~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      +|+++..+.+++++    +|+|+|++|++++++ +.++.|++  ++|.|.||||+.+|+.|++.++++++|+++|+||||
T Consensus       158 ~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n  233 (454)
T cd07118         158 TSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKN  233 (454)
T ss_pred             CcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCC
Confidence            99999987777655    899999999999865 57888987  899999999999999999999999999999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      |+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus       234 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~  313 (454)
T cd07118         234 PQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKI  313 (454)
T ss_pred             ceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|++++++||++++||....   ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~i~~a~~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  366 (454)
T cd07118         314 TDYVDAGRAEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVL  366 (454)
T ss_pred             HHHHHHHHhCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceE
Confidence            9999999999999999998542   1368999999999999999999999999985

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=3.7e-74  Score=596.90  Aligned_cols=365  Identities=21%  Similarity=0.300  Sum_probs=335.9

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCC-cEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATM-KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg-~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      -+||+|+|+.  ++..++++||+|| +++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus        39 ~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el  116 (500)
T TIGR01238        39 APIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPEL  116 (500)
T ss_pred             CceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHH
Confidence            4699999987  4678999999996 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++ ..|+..+++.++|+++..++.+.               ...++|+|||++|+|||||+...+++
T Consensus       117 a~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~  180 (500)
T TIGR01238       117 MALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQ  180 (500)
T ss_pred             HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHH
Confidence            999999999999998 47999999999999988765421               13579999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+++|+++..+.+++.+    +|+|+|++|+++|.+ +.++.|+.  ++|+|+||||+.+|+.|+
T Consensus       181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~  256 (500)
T TIGR01238       181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLIN  256 (500)
T ss_pred             HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHH
Confidence            99999999999999999999999887766655    999999999999865 77888887  999999999999999999


Q ss_pred             HHhhccC---CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          286 RNASKTL---TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       286 ~~aa~~l---~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      +.+++++   +|+++|+|||||+||++|+|++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.++++++++|
T Consensus       257 ~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG  336 (500)
T TIGR01238       257 QTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVG  336 (500)
T ss_pred             HHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCC
Confidence            9999886   7999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++||++++.++++++++|++++++|++++.|+... .+...+|+|++|||+.  .++|.+++||+||||+
T Consensus       337 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~-~~~~~~g~f~~PTvl~--~~~~~~~~eE~FgPvl  410 (500)
T TIGR01238       337 VPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDD-SRACQHGTFVAPTLFE--LDDIAELSEEVFGPVL  410 (500)
T ss_pred             CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCC-CCCCCCCeeEcCEEEc--cCCchHhhCCCcCCEE
Confidence            999999999999999999999999999999999988554311 1112469999999997  3799999999999985

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=6.1e-74  Score=592.50  Aligned_cols=362  Identities=30%  Similarity=0.458  Sum_probs=337.4

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI  148 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei  148 (439)
                      +||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|++++++|++++++|++++++|+||+..++ ..|+
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev   79 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEI   79 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHH
Confidence            589999999999999999999999999999999999999999999999999999999999999999999999998 4799


Q ss_pred             HHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCch
Q 013608          149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS  228 (439)
Q Consensus       149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~  228 (439)
                      ..+++.++|+++..++++.....+..   .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~  156 (452)
T cd07102          80 RGMLERARYMISIAEEALADIRVPEK---DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTP  156 (452)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCC---CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence            99999999999988877655433222   234567899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEE
Q 013608          229 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI  306 (439)
Q Consensus       229 ~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~i  306 (439)
                      +++..+.++++    ++|+|+|++|+++++.+.+..|+.  .+|+|+||||+++|++|++.++++++|+++|+|||||+|
T Consensus       157 ~~~~~l~~~l~----~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~i  232 (452)
T cd07102         157 LCGERFAAAFA----EAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY  232 (452)
T ss_pred             HHHHHHHHHHH----hcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceE
Confidence            99987766655    499999999999997788888987  899999999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHH
Q 013608          307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL  386 (439)
Q Consensus       307 V~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~  386 (439)
                      |++|||++.|++.+++|+|.++||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..++++++++
T Consensus       233 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~  312 (452)
T cd07102         233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQ  312 (452)
T ss_pred             EcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |++++++|+++++||.+...+ ...|+|++|||+.+++++|+++++|+||||+
T Consensus       313 i~~a~~~ga~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl  364 (452)
T cd07102         313 IADAIAKGARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVV  364 (452)
T ss_pred             HHHHHhCCCEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeE
Confidence            999999999999999854322 2468999999999999999999999999985

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=3.6e-74  Score=594.47  Aligned_cols=366  Identities=29%  Similarity=0.437  Sum_probs=338.6

Q ss_pred             CeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 013608           64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV  141 (439)
Q Consensus        64 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~  141 (439)
                      .+++++||+||+++++++.++.+|+++++++|++||+  .|+++|.++|.++|+++++.|++++++|++++++|+||+..
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            4689999999999999999999999999999999997  49999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEE
Q 013608          142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI  221 (439)
Q Consensus       142 ~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVl  221 (439)
                      ++...|+..+++.++|++++.+++... ..+..   .+..++++++|+|||++|+|||||+...++++++||++||+||+
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~  157 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGE-VAPTG---PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVL  157 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCc-eecCC---CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeee
Confidence            986569999999999999998876543 22221   23457789999999999999999999999999999999999999


Q ss_pred             ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhh-ccCCceEE
Q 013608          222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTL  297 (439)
Q Consensus       222 Kps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa-~~l~pv~l  297 (439)
                      |||+++|+++..+.+++.    ++|+|+|++|+|+|+. +.++.|+.  .+|.|.||||+.+|+.|++.++ ++++|+++
T Consensus       158 Kps~~~p~~~~~l~~~~~----~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l  233 (462)
T cd07112         158 KPAEQSPLTALRLAELAL----EAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL  233 (462)
T ss_pred             eCCCCCCHHHHHHHHHHH----hcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEe
Confidence            999999999998877765    4999999999999854 67888886  9999999999999999999998 58999999


Q ss_pred             EcCCCceEEecCCC-CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCC
Q 013608          298 ELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL  376 (439)
Q Consensus       298 elgGk~~~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~  376 (439)
                      |+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++
T Consensus       234 elgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~  313 (462)
T cd07112         234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVS  313 (462)
T ss_pred             cCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcC
Confidence            99999999999999 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          377 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       377 ~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++++++|++++++||++++||.....  ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  374 (462)
T cd07112         314 EAHFDKVLGYIESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVL  374 (462)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceE
Confidence            999999999999999999999999974321  2368999999999999999999999999985

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=6.7e-74  Score=591.93  Aligned_cols=359  Identities=31%  Similarity=0.460  Sum_probs=334.0

Q ss_pred             ecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 013608           69 YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI  148 (439)
Q Consensus        69 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei  148 (439)
                      +||.||+++++++.++.+++++++++|++||..|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++...|+
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev   81 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV   81 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999866799


Q ss_pred             HHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCch
Q 013608          149 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS  228 (439)
Q Consensus       149 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~  228 (439)
                      ..+++.++|++.+.++.... ..+..   ....++++++|+|||++|+|||||+...++++++||++||+||+|||+++|
T Consensus        82 ~~~i~~l~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p  157 (453)
T cd07115          82 PRAADTFRYYAGWADKIEGE-VIPVR---GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTP  157 (453)
T ss_pred             HHHHHHHHHHHHHHHHhcCc-eecCC---CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCc
Confidence            99999999999877654322 22211   234568999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceE
Q 013608          229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF  305 (439)
Q Consensus       229 ~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~  305 (439)
                      +++..+.+++++    +|+|++++|+++|+. +.++.|+.  .+|+|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus       158 ~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~  233 (453)
T cd07115         158 LSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN  233 (453)
T ss_pred             HHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCce
Confidence            999988777655    899999999999865 57788887  79999999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHH
Q 013608          306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN  385 (439)
Q Consensus       306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~  385 (439)
                      ||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++.|+++++++++|+|.++++++||++++++++++++
T Consensus       234 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~  313 (453)
T cd07115         234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLD  313 (453)
T ss_pred             EECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|++++++|+++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  363 (453)
T cd07115         314 YVDVGREEGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVV  363 (453)
T ss_pred             HHHHHHHCCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceE
Confidence            9999999999999999742    1368999999999999999999999999985

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=9.1e-74  Score=589.83  Aligned_cols=356  Identities=31%  Similarity=0.435  Sum_probs=331.5

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|+||+..++. .|
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e   79 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FE   79 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999885 69


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++++++...   ..+..+..   .....+++++|+|||++|+|||||+...++++++||++||+||+|||+++
T Consensus        80 v~~~~~~l~~~~~~~~---~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~  153 (446)
T cd07106          80 VGGAVAWLRYTASLDL---PDEVIEDD---DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFT  153 (446)
T ss_pred             HHHHHHHHHHHHhhhh---cCccccCC---CCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            9999999999887652   11111111   23456889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceE
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF  305 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~  305 (439)
                      |+++..+.+++++     ++|+|++|+++++.+.+..|++  .+|.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus       154 p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~  228 (446)
T cd07106         154 PLCTLKLGELAQE-----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAA  228 (446)
T ss_pred             hHHHHHHHHHHHH-----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCee
Confidence            9999999888876     3999999999997678888887  79999999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHH
Q 013608          306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN  385 (439)
Q Consensus       306 iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~  385 (439)
                      ||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus       229 iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~  308 (446)
T cd07106         229 IVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKE  308 (446)
T ss_pred             EECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|++++.+||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       309 ~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl  358 (446)
T cd07106         309 LVEDAKAKGAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVL  358 (446)
T ss_pred             HHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeE
Confidence            9999999999999999843    1368999999999999999999999999985

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.3e-73  Score=590.40  Aligned_cols=362  Identities=30%  Similarity=0.471  Sum_probs=333.3

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh-hhhhhh
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM-VDASLG  146 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~-~~a~~~  146 (439)
                      ++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+. .++ ..
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-~~   79 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQA-RP   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-HH
Confidence            4799999999999999999999999999999999999999999999999999999999999999999999997 577 47


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN  226 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~  226 (439)
                      |+..+++.++|+++...+. .....+.+   .....++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        80 ev~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~  155 (457)
T cd07108          80 EAAVLADLFRYFGGLAGEL-KGETLPFG---PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAED  155 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCceeccC---CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            9999999999999876543 33333322   2235678899999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       227 ~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      +|+++..+.+++.+     ++|+|++|+++|.+ +.++.|++  .+|+|+||||+.+|+.|++.++++++|+++|+||||
T Consensus       156 ~p~~~~~l~~~~~~-----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~  230 (457)
T cd07108         156 APLAVLLLAEILAQ-----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKS  230 (457)
T ss_pred             CcHHHHHHHHHHHH-----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCC
Confidence            99999988888775     38999999999864 67788887  799999999999999999999999999999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHH-HHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRA-ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~-~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      |+||++|+|++.|++.++++ .|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++|||+++.++++
T Consensus       231 ~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~  310 (457)
T cd07108         231 PMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAK  310 (457)
T ss_pred             eeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHH
Confidence            99999999999999999999 59999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH-CCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|+++++ +||++++||.....+....|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  368 (457)
T cd07108         311 VCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVL  368 (457)
T ss_pred             HHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceE
Confidence            9999999998 99999999986432224579999999999999999999999999985

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=2e-73  Score=587.03  Aligned_cols=371  Identities=19%  Similarity=0.250  Sum_probs=327.5

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHH--hhcCHHHH----HHHHHHHHHHHHHh
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVW--AKSSFKQR----RQFLRILLKYIIEH  124 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~l~~~l~~~  124 (439)
                      +||+|+|+.+  +++++++||+||+++++++.++.+|+++++++|++||+.|  +.++..+|    .++|+++++.|+++
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~   78 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP   78 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence            4789999875  4789999999999999999999999999999999999998  55778999    89999999999998


Q ss_pred             --HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcc-cCCCccccccceeEEEeeccEEEEEcCCCcc
Q 013608          125 --QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP  201 (439)
Q Consensus       125 --~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P  201 (439)
                        .++|++++++|+|||+.++ .+||..+++.++|+++...+.+.... .+..  ..+...+++++|+|||++|+|||||
T Consensus        79 ~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~--~~~~~~~v~r~P~GVV~~I~PwNfP  155 (489)
T cd07126          79 EVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFP  155 (489)
T ss_pred             CCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCC--CCCceeEEEEecceEEEEECCCchH
Confidence              5999999999999999998 58999999999999988766543321 1211  1234678999999999999999999


Q ss_pred             hhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChH
Q 013608          202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       202 ~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      +...++++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|+|+++.+..++.  ++|+|+||||+.
T Consensus       156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~  231 (489)
T cd07126         156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSK  231 (489)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHH
Confidence            999999999999999999999999999999988777665    99999999999997655555665  999999999999


Q ss_pred             HHHHHHHHhhccCCceEEEcCCCceEEecCCC-CHHHHHHHHHHHHHhccCCCCCCCceeEEehhh-HHHHHHHHHHHHH
Q 013608          280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVK  357 (439)
Q Consensus       280 ~~~~v~~~aa~~l~pv~lelgGk~~~iV~~da-Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i-~d~f~~~L~~~~~  357 (439)
                      +|++|...++   +++++|+|||||+||++|+ |++.+++.+++++|.|+||.|++++|+|||+++ +|+|+++|.++++
T Consensus       232 vGr~i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~  308 (489)
T cd07126         232 VAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAE  308 (489)
T ss_pred             HHHHHHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHH
Confidence            9999998876   6799999999999999999 999999999999999999999999999999995 6899999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-CCCEEEeCCCCCCCCCCCCC-ceeccEEEec------CCCCCcc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVD-QYFPPTVIVN------VNHTMKL  429 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g-~~~~PTvl~~------v~~~~~i  429 (439)
                      ++++|+     +++|||++.. .+++.++|+++++ +||++++||..........| .|++|||+..      ++++|++
T Consensus       309 ~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i  382 (489)
T cd07126         309 QRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFEL  382 (489)
T ss_pred             hcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHH
Confidence            999885     4899999998 8999999999998 99999999985321111133 3899999952      6789999


Q ss_pred             cccCccccCC
Q 013608          430 MQEEIILWVS  439 (439)
Q Consensus       430 ~~~E~FgPv~  439 (439)
                      ++||+||||+
T Consensus       383 ~~eEiFGPVl  392 (489)
T cd07126         383 VTTEVFGPFQ  392 (489)
T ss_pred             HhCCCcCCEE
Confidence            9999999985

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=4.7e-73  Score=588.66  Aligned_cols=376  Identities=28%  Similarity=0.385  Sum_probs=345.9

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS-SFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      +++||+|+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+.|+++ +.++|.++|+++++.|.+++++
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e   80 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE   80 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3579999998875 6889999999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCcc--ccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      |++++++|+||+..++. .|+..+++.++++++..+++... ..+....  ..+...+++++|+|||++|+|||||+...
T Consensus        81 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~  158 (473)
T cd07082          81 VANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGD-SLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLT  158 (473)
T ss_pred             HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCC-cccccccccCCCceeEEEEecceEEEEECCcCcHHHHH
Confidence            99999999999999984 69999999999999888765332 1111110  02345688999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++.+++||++||+||+|||+.+|.++..+.+++.+    +|+|+|++|++++.+ +.++.|+.  ++|.|+||||+++++
T Consensus       159 ~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~  234 (473)
T cd07082         159 VSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGN  234 (473)
T ss_pred             HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHH
Confidence            99999999999999999999999999987776654    899999999999865 55888886  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|.+.++  ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|
T Consensus       235 ~i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g  312 (473)
T cd07082         235 RLKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVG  312 (473)
T ss_pred             HHHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCC
Confidence            9999887  89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++||+++.++++++++++++++++|+++++||..      ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  383 (473)
T cd07082         313 MPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVL  383 (473)
T ss_pred             CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceE
Confidence            99999999999999999999999999999999999999983      238999999999999999999999999985

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=3e-73  Score=587.65  Aligned_cols=364  Identities=33%  Similarity=0.484  Sum_probs=334.8

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++||.||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|.+++++|++++++|+||+..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-   79 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence            479999999999999999999999999999997  49999999999999999999999999999999999999999984 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      .|+..+++.++|++...++. .....+..  ..+..++++++|+|||++|+|||||++..++++++||++||+||+|||+
T Consensus        80 ~ev~~~~~~~~~~a~~~~~~-~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~  156 (457)
T cd07114          80 AQVRYLAEWYRYYAGLADKI-EGAVIPVD--KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE  156 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCcccccC--CCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence            69999999999988766543 22222211  1234578899999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK  302 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk  302 (439)
                      ++|+++..+.+++++    +|+|+|+||+++++. +.++.|+.  .++.|.||||+++|+.|++.++++++|+++|+|||
T Consensus       157 ~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~  232 (457)
T cd07114         157 HTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGK  232 (457)
T ss_pred             cchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCC
Confidence            999999988877665    899999999999965 57788887  89999999999999999999999999999999999


Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      ||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||++++++++
T Consensus       233 ~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  312 (457)
T cd07114         233 SPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEK  312 (457)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|++++++|+++++||.+...+....|.|++|||+.+++++|++++||+||||+
T Consensus       313 ~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  369 (457)
T cd07114         313 VERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVL  369 (457)
T ss_pred             HHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceE
Confidence            999999999999999999986543333468999999999999999999999999985

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=5.3e-73  Score=585.46  Aligned_cols=359  Identities=27%  Similarity=0.399  Sum_probs=332.8

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++++||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|.+++++|++++++|+||+..+++ 
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   79 (453)
T cd07094           1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-   79 (453)
T ss_pred             CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            3679999999999999999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCcc--ccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEec
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV  223 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKp  223 (439)
                      .|+..+++.++|++++.+++... ..+....  ......+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        80 ~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp  158 (453)
T cd07094          80 VEVDRAIDTLRLAAEEAERIRGE-EIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP  158 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCc-cccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence            69999999999999988776432 2221110  02345678899999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcC
Q 013608          224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG  300 (439)
Q Consensus       224 s~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg  300 (439)
                      |+.+|+++..+++++.+    +|+|+|++|+++|++ +.++.|++  ++|+|+||||+.+|+.|++.+  +++|+++|+|
T Consensus       159 s~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelG  232 (453)
T cd07094         159 ASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELG  232 (453)
T ss_pred             CCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecC
Confidence            99999999988887765    899999999999866 55888987  799999999999999999988  5899999999


Q ss_pred             CCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHH
Q 013608          301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS  380 (439)
Q Consensus       301 Gk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~  380 (439)
                      ||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus       233 Gk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~  312 (453)
T cd07094         233 GNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAA  312 (453)
T ss_pred             CCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       381 ~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|++|+++|+++++||.       ..|+|++|||+.+++++|+++++|+||||+
T Consensus       313 ~~~~~~i~~a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl  364 (453)
T cd07094         313 ERVERWVEEAVEAGARLLCGGE-------RDGALFKPTVLEDVPRDTKLSTEETFGPVV  364 (453)
T ss_pred             HHHHHHHHHHHHCCCEEEeCcc-------CCCeEEeCEEEeCCCCCChhhhCCCcCceE
Confidence            9999999999999999999997       258899999999999999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=5.2e-73  Score=585.33  Aligned_cols=359  Identities=25%  Similarity=0.372  Sum_probs=331.0

Q ss_pred             EeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 013608           67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG  146 (439)
Q Consensus        67 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~  146 (439)
                      +++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+||+..++. .
T Consensus         2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~   80 (452)
T cd07147           2 EVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-G   80 (452)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence            689999999999999999999999999999999999999999999999999999999999999999999999999985 6


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCC-CccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE  225 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~  225 (439)
                      |+..+++.++++++...++........ .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~  160 (452)
T cd07147          81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS  160 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            999999999999988766532211100 0001233567889999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       226 ~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      .+|+++..+.+++++    +|+|+|++|+++++.+.+..|+.  ++|.|+||||+.+|+.|++.++  .+|+++|+||||
T Consensus       161 ~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~  234 (452)
T cd07147         161 RTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNA  234 (452)
T ss_pred             CCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCC
Confidence            999999988777665    89999999999997778888886  9999999999999999999887  379999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL  383 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~  383 (439)
                      |+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++
T Consensus       235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~  314 (452)
T cd07147         235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV  314 (452)
T ss_pred             cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          384 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       384 ~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|++++++|+++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~~i~~a~~~Ga~~l~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  363 (452)
T cd07147         315 EGWVNEAVDAGAKLLTGGK-------RDGALLEPTILEDVPPDMEVNCEEVFGPVV  363 (452)
T ss_pred             HHHHHHHHHCCCEEEecCC-------cCCEEEcCEEEeCCCCCChHHhCcCcCCeE
Confidence            9999999999999999997       248899999999999999999999999985

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=9.1e-73  Score=584.22  Aligned_cols=364  Identities=32%  Similarity=0.456  Sum_probs=336.9

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      .+||+||+++++++.++.+|+++++++|++|+..|++++.++|.++|+++++.|.+++++|++++++|+||+..+++..|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e   80 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD   80 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999998887679


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|+++...+. .....+..   .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        81 v~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~  156 (455)
T cd07093          81 IPRAAANFRFFADYILQL-DGESYPQD---GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWT  156 (455)
T ss_pred             HHHHHHHHHHHHHhHHHh-CCccccCC---CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcC
Confidence            999999999999887653 22222211   23566789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA  304 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~  304 (439)
                      |+++..+.+++++    +|+|+|+||+++|.+ +.++.|++  ++|.|.||||+.+|+.|.+.++++++|+++|+|||||
T Consensus       157 p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~  232 (455)
T cd07093         157 PLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP  232 (455)
T ss_pred             cHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCc
Confidence            9999887777654    999999999999854 67788887  7999999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHH
Q 013608          305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ  384 (439)
Q Consensus       305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~  384 (439)
                      +||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus       233 ~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~  312 (455)
T cd07093         233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVL  312 (455)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl  367 (455)
T cd07093         313 GYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVV  367 (455)
T ss_pred             HHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceE
Confidence            9999999999999999986544334569999999999999999999999999985

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=9.7e-73  Score=583.21  Aligned_cols=359  Identities=29%  Similarity=0.435  Sum_probs=331.5

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|.+++++|++++++|+||+..++...|
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e   80 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE   80 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999998776679


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.+++++...+..... ..+..  ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        81 v~~~i~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~  157 (450)
T cd07092          81 LPGAVDNFRFFAGAARTLEGP-AAGEY--LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETT  157 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhcCc-ccCcc--CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            999999999999876653221 11111  122356789999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA  304 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~  304 (439)
                      |+++..+.+++++     |+|+|++|++++++ +.++.|++  .+|.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus       158 ~~~~~~l~~~~~~-----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p  232 (450)
T cd07092         158 PLTTLLLAELAAE-----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAP  232 (450)
T ss_pred             hHHHHHHHHHHHh-----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCe
Confidence            9999988877753     99999999999866 47888887  8999999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHH
Q 013608          305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ  384 (439)
Q Consensus       305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~  384 (439)
                      +||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++++
T Consensus       233 ~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~  312 (450)
T cd07092         233 VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVA  312 (450)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++|+++. +||++++||....    ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~~i~~a~-~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  362 (450)
T cd07092         313 GFVERAP-AHARVLTGGRRAE----GPGYFYEPTVVAGVAQDDEIVQEEIFGPVV  362 (450)
T ss_pred             HHHHHHH-cCCEEEeCCCCCC----CCccEEeeEEEEcCCCCChHHhCCCcCceE
Confidence            9999999 9999999998431    368999999999999999999999999985

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.3e-72  Score=580.67  Aligned_cols=350  Identities=29%  Similarity=0.437  Sum_probs=324.1

Q ss_pred             CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 013608           74 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE  153 (439)
Q Consensus        74 g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~  153 (439)
                      |+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~   79 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG   79 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999998884 69999999


Q ss_pred             HHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH-H
Q 013608          154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C  232 (439)
Q Consensus       154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~-~  232 (439)
                      .++++++...+.... ..+..   .+..++++++|+|||++|+|||||+...++++++||++||+||+|||+++|.++ .
T Consensus        80 ~l~~~~~~~~~~~~~-~~~~~---~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~  155 (443)
T cd07152          80 ELHEAAGLPTQPQGE-ILPSA---PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV  155 (443)
T ss_pred             HHHHHHHhHHHhCCc-ccccc---CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence            999999876543221 11111   234568899999999999999999999999999999999999999999999996 4


Q ss_pred             HHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCC
Q 013608          233 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD  310 (439)
Q Consensus       233 ~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~d  310 (439)
                      .+.++    |.++|+|+|++|+++++.+.++.|+.  ++|.|.||||+.+|++|.+.++++++|+++|+|||||+||++|
T Consensus       156 ~l~~~----~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d  231 (443)
T cd07152         156 VIARL----FEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDD  231 (443)
T ss_pred             HHHHH----HHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence            55544    55599999999999997678888887  8999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 013608          311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA  390 (439)
Q Consensus       311 aDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a  390 (439)
                      +|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.++|+++
T Consensus       232 Adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a  311 (443)
T cd07152         232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDS  311 (443)
T ss_pred             CCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++|+++++||..       .|+|++|||+.+++++|++++||+||||+
T Consensus       312 ~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  353 (443)
T cd07152         312 VAAGARLEAGGTY-------DGLFYRPTVLSGVKPGMPAFDEEIFGPVA  353 (443)
T ss_pred             HhCCCEEEeccCc-------CCEEEcCEEEecCCCCChhhhccccCCeE
Confidence            9999999999972       48899999999999999999999999985

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=2.3e-72  Score=580.81  Aligned_cols=360  Identities=33%  Similarity=0.522  Sum_probs=334.6

Q ss_pred             eecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH
Q 013608           68 CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE  147 (439)
Q Consensus        68 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E  147 (439)
                      ++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++ .|
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e   79 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GE   79 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999984 79


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCc
Q 013608          148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA  227 (439)
Q Consensus       148 i~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~  227 (439)
                      +..+++.++|++...++.... ..+..  ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        80 v~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~  156 (451)
T cd07103          80 VDYAASFLEWFAEEARRIYGR-TIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET  156 (451)
T ss_pred             HHHHHHHHHHHHHHHHHhcCc-ccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccC
Confidence            999999999999887665432 12211  124567889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce
Q 013608          228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA  304 (439)
Q Consensus       228 ~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~  304 (439)
                      |.++..+.+++++    +|+|+|++|+++++. +.++.|+.  ++|.|+||||+.+|+.|.+.++++++|+++|+|||||
T Consensus       157 ~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~  232 (451)
T cd07103         157 PLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAP  232 (451)
T ss_pred             cHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCe
Confidence            9999988877665    999999999999865 66777886  8999999999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHH
Q 013608          305 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ  384 (439)
Q Consensus       305 ~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~  384 (439)
                      +||++|+|++.|++.+++|+|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.
T Consensus       233 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~  312 (451)
T cd07103         233 FIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVE  312 (451)
T ss_pred             EEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       385 ~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++++++||++++||...    ..+|+|++|||+.+++++|+++++|+||||+
T Consensus       313 ~~i~~a~~~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl  363 (451)
T cd07103         313 ALVEDAVAKGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVA  363 (451)
T ss_pred             HHHHHHHHCCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceE
Confidence            99999999999999999743    1368999999999999999999999999985

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=2.7e-72  Score=575.59  Aligned_cols=339  Identities=29%  Similarity=0.508  Sum_probs=317.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK  167 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~  167 (439)
                      +++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++ .|+..+++.++|++..+++++.
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~   79 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA   79 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999999999999999999999995 7999999999999999988876


Q ss_pred             CcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 013608          168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA  247 (439)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~  247 (439)
                      .+..+.+    ...++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+    +|+
T Consensus        80 ~~~~~~~----~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~----agl  151 (429)
T cd07100          80 DEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFRE----AGF  151 (429)
T ss_pred             CeeccCC----CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCC
Confidence            5544432    23567899999999999999999999999999999999999999999999999887777654    999


Q ss_pred             CCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHH
Q 013608          248 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL  325 (439)
Q Consensus       248 p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f  325 (439)
                      |+|++|+++++.+.+..|++  ++++|.||||+++|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++|+|
T Consensus       152 P~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~  231 (429)
T cd07100         152 PEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL  231 (429)
T ss_pred             CcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence            99999999997777888887  8999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC
Q 013608          326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH  405 (439)
Q Consensus       326 ~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~  405 (439)
                      .|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++||++++.++++++++|++++++||++++||.+..
T Consensus       232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~  311 (429)
T cd07100         232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD  311 (429)
T ss_pred             hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997431


Q ss_pred             CCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       406 ~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                          ..|+|++|||+.++++||++++||+||||+
T Consensus       312 ----~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl  341 (429)
T cd07100         312 ----GPGAFYPPTVLTDVTPGMPAYDEELFGPVA  341 (429)
T ss_pred             ----CCCeEEcCEEeecCCCCCHHHhCCCCCCeE
Confidence                358999999999999999999999999985

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=7.3e-72  Score=575.33  Aligned_cols=355  Identities=27%  Similarity=0.388  Sum_probs=325.5

Q ss_pred             EeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhh
Q 013608           67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG  146 (439)
Q Consensus        67 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~  146 (439)
                      +++||+||+++++++.++.+++++++++|+++   |+.++.++|.++|+++++.|++++++|++++++|+|||..++. .
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~   77 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-Y   77 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-H
Confidence            57899999999999999999999999998865   8889999999999999999999999999999999999999994 7


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCcccCCCcc--ccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecC
Q 013608          147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS  224 (439)
Q Consensus       147 Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps  224 (439)
                      |+..+++.++|+++...++.. +..+....  ......+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus        78 ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps  156 (451)
T cd07146          78 EVGRAADVLRFAAAEALRDDG-ESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPS  156 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-cccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence            999999999999987765422 21111100  023456789999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCC
Q 013608          225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG  301 (439)
Q Consensus       225 ~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgG  301 (439)
                      +.+|+++..+.++++    ++|+|+|++|+++|++ +.++.|++  ++|.|.||||+.+|+.|.+.++  ++|+++|+||
T Consensus       157 ~~~p~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG  230 (451)
T cd07146         157 EKTPLSAIYLADLLY----EAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGG  230 (451)
T ss_pred             CCchHHHHHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCC
Confidence            999999987777655    4999999999999865 66888987  9999999999999999999876  7899999999


Q ss_pred             CceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHH
Q 013608          302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE  381 (439)
Q Consensus       302 k~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~  381 (439)
                      |||+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++|||+++.+++
T Consensus       231 ~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~  310 (451)
T cd07146         231 NDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAI  310 (451)
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       382 ~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|++++++||++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       311 ~v~~~v~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  361 (451)
T cd07146         311 QIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDHVPPDAELVTEETFGPVA  361 (451)
T ss_pred             HHHHHHHHHHhCCCEEEeCCC-------cCCEEEcCEEeecCCCCCHHHhCCCCCCeE
Confidence            999999999999999999997       248899999999999999999999999985

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=1.9e-71  Score=575.28  Aligned_cols=344  Identities=28%  Similarity=0.433  Sum_probs=319.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      ..+.+|+++++++|++||..|+.++.++|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++++
T Consensus         3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~   82 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH   82 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999778999999999999999


Q ss_pred             hhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608          162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA  241 (439)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~  241 (439)
                      .++|.+++....+.......++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++ 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~-  161 (493)
T PTZ00381         83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK-  161 (493)
T ss_pred             HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-
Confidence            9998876654433222234678999999999999999999999999999999999999999999999999988888765 


Q ss_pred             HHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHH
Q 013608          242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA  320 (439)
Q Consensus       242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i  320 (439)
                          ++|+|++++++|+.+.+..|++ .+|+|+||||+.+|++|++.++++++|+++|+|||||+||++|||++.|++.+
T Consensus       162 ----~lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i  237 (493)
T PTZ00381        162 ----YLDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRI  237 (493)
T ss_pred             ----hCCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence                4999999999997788888988 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608          321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR  400 (439)
Q Consensus       321 ~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g  400 (439)
                      ++|+|.|+||.|++++++|||++++|+|+++|.+++++++ |++.++++++|||+++.+++++.++|+   ++|+++++|
T Consensus       238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~g  313 (493)
T PTZ00381        238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYG  313 (493)
T ss_pred             HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEEC
Confidence            9999999999999999999999999999999999999986 766678899999999999999999996   369999999


Q ss_pred             CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |..     ...|.|++|||+.++++||++++||+||||+
T Consensus       314 G~~-----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl  347 (493)
T PTZ00381        314 GEV-----DIENKYVAPTIIVNPDLDSPLMQEEIFGPIL  347 (493)
T ss_pred             CCc-----CCCCCeEeeEEEecCCCCChHHhccccCCeE
Confidence            973     2468899999999999999999999999985

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=7.3e-71  Score=569.99  Aligned_cols=360  Identities=28%  Similarity=0.439  Sum_probs=330.0

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL  145 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~  145 (439)
                      ++++||+||+++++++.++.+++++++++|++|+..|++++.++|.++|+++++.|.+++++|++++++|+||+..++. 
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   79 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-   79 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-
Confidence            4679999999999999999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCCcccCCCcc-ccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecC
Q 013608          146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS  224 (439)
Q Consensus       146 ~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps  224 (439)
                      .|+..+++.++|+++...++........... ......+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus        80 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps  159 (453)
T cd07149          80 KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPA  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECC
Confidence            6999999999999987765433211111000 012345788999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCC
Q 013608          225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG  301 (439)
Q Consensus       225 ~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgG  301 (439)
                      +.+|.++..+.+++++    +|+|+|++|+++++. +.++.|+.  ++|+|+||||+.+|+.|++.++  ++|+++|+||
T Consensus       160 ~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGG  233 (453)
T cd07149         160 SQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGS  233 (453)
T ss_pred             CcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCC
Confidence            9999999988777665    899999999999865 45888887  8999999999999999999875  8999999999


Q ss_pred             CceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHH
Q 013608          302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE  381 (439)
Q Consensus       302 k~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~  381 (439)
                      |||+||++|+|++.+++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus       234 k~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~  313 (453)
T cd07149         234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAE  313 (453)
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       382 ~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|++++.+|+++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~~i~~a~~~ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl  364 (453)
T cd07149         314 RIEEWVEEAVEGGARLLTGGK-------RDGAILEPTVLTDVPPDMKVVCEEVFAPVV  364 (453)
T ss_pred             HHHHHHHHHHHCCCEEEeCCC-------CCCeEEcCEEEeCCCCCCHHHhCCCCCceE
Confidence            999999999999999999997       248899999999999999999999999985

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=7.9e-71  Score=573.16  Aligned_cols=367  Identities=18%  Similarity=0.192  Sum_probs=327.5

Q ss_pred             CCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 013608           59 TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK  138 (439)
Q Consensus        59 ~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk  138 (439)
                      .+.++....++||+|++.+++++.+   |++++|++|++|++.|+++++.+|.++|++++++|.+++++|++++++|+||
T Consensus        60 ~~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk  136 (549)
T cd07127          60 PGASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ  136 (549)
T ss_pred             CCCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence            3446789999999999999999998   8999999999999999999999999999999999999999999999999999


Q ss_pred             Chhhhhh--h--HHHHHHHHHHHHHHhhhhhcCC------cccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          139 TMVDASL--G--EIMTTCEKITWLLSEGEKWLKP------EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       139 ~~~~a~~--~--Ei~~~~~~l~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++.++..  +  |+..+++.++|+.+...+....      +.+..... .  .....++|+||+++|+|||||+++.+.+
T Consensus       137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~-~--~k~~~~~P~GVv~vI~p~nfP~~~~~~~  213 (549)
T cd07127         137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLA-M--EKTFTVVPRGVALVIGCSTFPTWNGYPG  213 (549)
T ss_pred             CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCccccc-c--cceeEEecccEEEEEeCcCChHHHHHHH
Confidence            9987753  1  7999999999999877654321      11111111 1  1245789999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh--hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~--~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      +++||++||+||+|||+.+|+++.++.++++++|.++|+|+|+||++++++  +.++.|+.  .+++|.||||+.+|++|
T Consensus       214 i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i  293 (549)
T cd07127         214 LFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWL  293 (549)
T ss_pred             HHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence            999999999999999999999999889999999999999999999999853  67888887  99999999999999999


Q ss_pred             HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehh---------hHHHHHHHHHHH
Q 013608          285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKI  355 (439)
Q Consensus       285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~---------i~d~f~~~L~~~  355 (439)
                      .+.++  .+|+++|+||||++||++|+|++.+++.+++|+|.|+||.|++++|+|||++         +||+|+++|+++
T Consensus       294 ~~~a~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~  371 (549)
T cd07127         294 EANAR--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAA  371 (549)
T ss_pred             HHHhc--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHH
Confidence            99998  4899999999999999999999999999999999999999999999999999         899999999999


Q ss_pred             HHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcc
Q 013608          356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEII  435 (439)
Q Consensus       356 ~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~F  435 (439)
                      ++++ +|+|.+..+++|||++++++++++    ++++.|+ +++||....+|..+.++|++|||+.+++++|++++||+|
T Consensus       372 ~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~----~a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~F  445 (549)
T cd07127         372 IDGL-LADPARAAALLGAIQSPDTLARIA----EARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERF  445 (549)
T ss_pred             HHHh-cCCccccccccCCcCCHHHHHHHH----HHHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCc
Confidence            9999 999999999999999999999985    4666775 888887665554444567799999988899999999999


Q ss_pred             ccCC
Q 013608          436 LWVS  439 (439)
Q Consensus       436 gPv~  439 (439)
                      |||+
T Consensus       446 GPVl  449 (549)
T cd07127         446 GPIA  449 (549)
T ss_pred             CceE
Confidence            9985

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=4.2e-71  Score=566.23  Aligned_cols=339  Identities=26%  Similarity=0.382  Sum_probs=314.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhc
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL  166 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l  166 (439)
                      |+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++|+++...++.
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~   79 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999999999999999984 799999999999998887765


Q ss_pred             CCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 013608          167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG  246 (439)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG  246 (439)
                      .....+.    .+..++++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..+.+++.+    +|
T Consensus        80 ~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~----ag  151 (431)
T cd07095          80 GERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEE----AG  151 (431)
T ss_pred             CCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHH----hC
Confidence            4433222    235678999999999999999999999999999999999999999999999999877777654    89


Q ss_pred             CCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc-CCceEEEcCCCceEEecCCCCHHHHHHHHHHH
Q 013608          247 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA  323 (439)
Q Consensus       247 ~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~-l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~  323 (439)
                      +|+|++|+++++.+.++.|++  ++|.|.||||+.+|++|++.++++ ++++++|+|||||+||++|+|++.|++.++++
T Consensus       152 ~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~  231 (431)
T cd07095         152 LPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS  231 (431)
T ss_pred             cChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence            999999999997678888887  799999999999999999987754 69999999999999999999999999999999


Q ss_pred             HHhccCCCCCCCceeEEehh-hHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Q 013608          324 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS  402 (439)
Q Consensus       324 ~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~  402 (439)
                      +|.|+||.|++++|||||++ +||+|+++|.++++++++|+|.++++++||+++..+++++.+++++++++||++++||.
T Consensus       232 ~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~  311 (431)
T cd07095         232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME  311 (431)
T ss_pred             HHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       403 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ..    .++|+|++|||+ +++++|++++||+||||+
T Consensus       312 ~~----~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl  343 (431)
T cd07095         312 RL----VAGTAFLSPGII-DVTDAADVPDEEIFGPLL  343 (431)
T ss_pred             cC----CCCCeEEcCEEE-ecCCCChHHhCCCcCCeE
Confidence            43    246899999999 799999999999999985

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=6.7e-71  Score=572.48  Aligned_cols=364  Identities=18%  Similarity=0.213  Sum_probs=317.2

Q ss_pred             CeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 013608           64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA  143 (439)
Q Consensus        64 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a  143 (439)
                      ..-.-+||+||+++++++.++.   ++++++|++||+.|+++++.+|.++|+++++.|++|+++|++++++|+||+..++
T Consensus        65 ~~~~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a  141 (551)
T TIGR02288        65 WVGGERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMA  141 (551)
T ss_pred             ccccccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence            3345579999999999999995   8999999999999999999999999999999999999999999999999999877


Q ss_pred             hh-h---HHHHHHHHHHHHHHhhhhhcCCcc--cCCCcc-ccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhC
Q 013608          144 SL-G---EIMTTCEKITWLLSEGEKWLKPEY--RSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG  216 (439)
Q Consensus       144 ~~-~---Ei~~~~~~l~~~~~~~~~~l~~~~--~~~~~~-~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aG  216 (439)
                      .. +   ++...++.++|++....+......  .+.+.. ......+++++|+|||++|+|||||+++.++++++||++|
T Consensus       142 ~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaG  221 (551)
T TIGR02288       142 FQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATG  221 (551)
T ss_pred             HhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcC
Confidence            32 2   778889999999887665432111  011100 0011224688999999999999999999999999999999


Q ss_pred             CEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC--hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccC
Q 013608          217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL  292 (439)
Q Consensus       217 N~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~--~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l  292 (439)
                      |+||+|||+.+|+++.++.+++.++|.++|+|+|+||++++.  .+.++.|+.  .++.|.||||+.+|++|++.++  .
T Consensus       222 N~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~  299 (551)
T TIGR02288       222 NPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--Q  299 (551)
T ss_pred             CeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--c
Confidence            999999999999999888888889999999999999999984  367888987  8999999999999999999887  4


Q ss_pred             CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehh---------hHHHHHHHHHHHHHhCccCC
Q 013608          293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       293 ~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~---------i~d~f~~~L~~~~~~l~~G~  363 (439)
                      +++++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|+|||++         +||+|+++|+++++++ +|+
T Consensus       300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd  378 (551)
T TIGR02288       300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD  378 (551)
T ss_pred             CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence            899999999999999999999999999999999999999999999999999         7999999999999999 999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCC-CCCcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN-HTMKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~-~~~~i~~~E~FgPv~  439 (439)
                      |.++.+++|||+++++++++    ++++++| ++++||....++..+.++|++|||+. ++ +||++++||+||||+
T Consensus       379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~-~~~~d~~i~~eE~FGPVl  449 (551)
T TIGR02288       379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLK-CDAADEAAYMQERFGPIA  449 (551)
T ss_pred             cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEE-cCCCCCHHHhCCCcCCEE
Confidence            99999999999999999985    6677888 67777765444333344689999994 55 499999999999985

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=7.8e-71  Score=568.37  Aligned_cols=346  Identities=29%  Similarity=0.405  Sum_probs=317.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      .+..+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..++..+|+..+++.++|++++
T Consensus         2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~   81 (484)
T PLN02203          2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN   81 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999667999999999999999


Q ss_pred             hhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608          162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA  241 (439)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~  241 (439)
                      ..++..+.............+++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.+ 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~-  160 (484)
T PLN02203         82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK-  160 (484)
T ss_pred             HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH-
Confidence            8887654321111111234578999999999999999999999999999999999999999999999999988888764 


Q ss_pred             HHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC---CCCHHHHH
Q 013608          242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD---DVDVPHVA  317 (439)
Q Consensus       242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~---daDl~~aa  317 (439)
                          ++|+|++|+++|+.+.++.|+. .+|+|+||||+.+|+.|++.++++++|+++|+|||||+||++   |+|++.|+
T Consensus       161 ----~lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa  236 (484)
T PLN02203        161 ----YLDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAV  236 (484)
T ss_pred             ----hCCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence                4999999999996688899988 899999999999999999999999999999999999999997   69999999


Q ss_pred             HHHHHHHHh-ccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCE
Q 013608          318 QIAVRAALQ-SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE  396 (439)
Q Consensus       318 ~~i~~~~f~-~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~  396 (439)
                      +.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++|||+++.++++++++|++++++ ++
T Consensus       237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~  314 (484)
T PLN02203        237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-AS  314 (484)
T ss_pred             HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-Ce
Confidence            999999996 89999999999999999999999999999999999999875 6899999999999999999999987 78


Q ss_pred             EEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          397 ILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       397 ~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++||..     .+.|+|++|||+.++++||++++||+||||+
T Consensus       315 ~~~gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl  352 (484)
T PLN02203        315 IVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLL  352 (484)
T ss_pred             EEeCCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeE
Confidence            9999973     2369999999999999999999999999985

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.6e-70  Score=604.60  Aligned_cols=365  Identities=20%  Similarity=0.358  Sum_probs=336.5

Q ss_pred             CCCeEEeecCCCCc-EeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 013608           62 SETKVQCYEPATMK-YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM  140 (439)
Q Consensus        62 ~~~~~~~~~P~tg~-~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~  140 (439)
                      +++.++++||+|++ ++++++.++.+++++++++|++||+.|+.+|+.+|.++|+++++.|++++++|+.++++|+||+.
T Consensus       560 ~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~  639 (1038)
T PRK11904        560 EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTL  639 (1038)
T ss_pred             CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence            46789999999988 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhhhhhcCC-cccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEE
Q 013608          141 VDASLGEIMTTCEKITWLLSEGEKWLKP-EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI  219 (439)
Q Consensus       141 ~~a~~~Ei~~~~~~l~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~V  219 (439)
                      .++ ..|+..+++.++|++..++++... ...+..   .+..++++++|+|||++|+|||||+..+++++++||++||+|
T Consensus       640 ~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~---~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtV  715 (1038)
T PRK11904        640 QDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGP---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTV  715 (1038)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCC---CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence            999 589999999999999998876532 222322   346788999999999999999999999999999999999999


Q ss_pred             EEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CC
Q 013608          220 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LT  293 (439)
Q Consensus       220 VlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~  293 (439)
                      |+|||+++|+++..+.+++.+    +|+|+|++|+++|++ +.++.|+.  +++.|+||||+.+++.|.+.++++   ++
T Consensus       716 IlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~  791 (1038)
T PRK11904        716 IAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIV  791 (1038)
T ss_pred             EeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCc
Confidence            999999999999988877665    999999999999976 47888987  899999999999999999988865   78


Q ss_pred             ceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccc
Q 013608          294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA  373 (439)
Q Consensus       294 pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gp  373 (439)
                      |+++|+||||++||++|||+|.|++.+++|+|.++||.|+++++||||+++||+|+++|+++++++++|+|.+.++++||
T Consensus       792 pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GP  871 (1038)
T PRK11904        792 PLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGP  871 (1038)
T ss_pred             eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       374 li~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|++.++++++++|+++++ |+++++||...+  ....|+|++|||+.  .++|.+++||+||||+
T Consensus       872 vI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL  932 (1038)
T PRK11904        872 VIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFE--IDSISQLEREVFGPIL  932 (1038)
T ss_pred             CCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEc--cCCcHHhCCCCcCcEE
Confidence            9999999999999999877 899999997432  12469999999995  3688999999999985

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=4.9e-70  Score=558.42  Aligned_cols=343  Identities=27%  Similarity=0.428  Sum_probs=315.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhh
Q 013608           83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG  162 (439)
Q Consensus        83 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~  162 (439)
                      ++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.++|++..+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999986579999999999999988


Q ss_pred             hhhcCCcccCCCc-cccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608          163 EKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA  241 (439)
Q Consensus       163 ~~~l~~~~~~~~~-~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~  241 (439)
                      +++...+...... .......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++++ 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-  160 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-  160 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence            7765443332211 11234678899999999999999999999999999999999999999999999999888887765 


Q ss_pred             HHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHH
Q 013608          242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA  320 (439)
Q Consensus       242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i  320 (439)
                          |+|+|++|+++|+++....|+. .+|.|+||||+.+|++|++.++++++|+++|+|||||+||++|+|++.|++.+
T Consensus       161 ----~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i  236 (436)
T cd07135         161 ----YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI  236 (436)
T ss_pred             ----hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence                6999999999987665666777 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608          321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR  400 (439)
Q Consensus       321 ~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g  400 (439)
                      ++++|.++||.|++++|||||+++||+|+++|.++++++++|+| ++++++||++++.+++++.++|+++   |+++++|
T Consensus       237 ~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g  312 (436)
T cd07135         237 LWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG  312 (436)
T ss_pred             HHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence            99999999999999999999999999999999999999999999 8999999999999999999999987   8899999


Q ss_pred             CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |...     ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 g~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl  346 (436)
T cd07135         313 GEMD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVL  346 (436)
T ss_pred             CCcC-----CCCCEEccEEEecCCCccHHHhccccCCce
Confidence            9742     368999999999999999999999999985

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=6.4e-70  Score=604.67  Aligned_cols=355  Identities=22%  Similarity=0.366  Sum_probs=329.8

Q ss_pred             CCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 013608           62 SETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM  140 (439)
Q Consensus        62 ~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~  140 (439)
                      ++..++++||+| ++++++++.++.+|++.++++|++|++.|+.+|..+|.++|+++++.|++++++|+.++++|+||+.
T Consensus       657 ~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~  736 (1318)
T PRK11809        657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTF  736 (1318)
T ss_pred             CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH
Confidence            456899999999 8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEE
Q 013608          141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV  220 (439)
Q Consensus       141 ~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VV  220 (439)
                      .++ ..||..+++.++|++..+++.+               ....++|+|||++|+|||||+..+++++++||++||+||
T Consensus       737 ~~A-~~EV~eaidflryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV  800 (1318)
T PRK11809        737 SNA-IAEVREAVDFLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVL  800 (1318)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEE
Confidence            998 5899999999999998765421               124679999999999999999999999999999999999


Q ss_pred             EecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccC-----
Q 013608          221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL-----  292 (439)
Q Consensus       221 lKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l-----  292 (439)
                      +|||+++|+++..+++++++    +|+|+|++|+++|++ +.++.|+.  +|++|+||||+++|+.|.+.+++++     
T Consensus       801 ~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~  876 (1318)
T PRK11809        801 AKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGR  876 (1318)
T ss_pred             EeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccC
Confidence            99999999999988887665    899999999999976 56889987  9999999999999999999999876     


Q ss_pred             -CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcc
Q 013608          293 -TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM  371 (439)
Q Consensus       293 -~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~  371 (439)
                       +|+++|+||||++||++|||+|.+++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|+|.+.++++
T Consensus       877 ~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdv  956 (1318)
T PRK11809        877 PIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDI  956 (1318)
T ss_pred             ceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCc
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       372 Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ||+|++.++++++++|++++++|++++.||..... ....|+|++|||+..  ++|.++++|+||||+
T Consensus       957 GPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~-~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL 1021 (1318)
T PRK11809        957 GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSE-DWQSGTFVPPTLIEL--DSFDELKREVFGPVL 1021 (1318)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCC-CCCCCeEEeeEEEec--cchhhhcCcccCceE
Confidence            99999999999999999999999999998864211 124699999999973  678999999999985

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=6.4e-70  Score=556.91  Aligned_cols=338  Identities=28%  Similarity=0.407  Sum_probs=310.5

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      +++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+||+..++...|+..+++.++|++.++.++..+.
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            58899999999999999999999999999999999999999999999999998865699999999999999887765543


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      .............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++++     ++|+
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-----~~P~  157 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-----YLDT  157 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-----hCCc
Confidence            22111101223567899999999999999999999999999999999999999999999999988888775     4999


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHH-hc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL-QS  327 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f-~~  327 (439)
                      |++|+++|+.+.++.|++ .+|.|+||||+.+|++|++.++++++|+++|+|||||+||++|||++.|++.+++++| .|
T Consensus       158 gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~  237 (432)
T cd07137         158 KAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN  237 (432)
T ss_pred             CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhcc
Confidence            999999997788888988 8999999999999999999999999999999999999999999999999999999999 59


Q ss_pred             cCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCC
Q 013608          328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS  407 (439)
Q Consensus       328 ~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~  407 (439)
                      +||.|++++|+|||++++|+|+++|.+++++++.|+| ++++++|||+++.++++++++|+++++ |+++++||..    
T Consensus       238 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~----  311 (432)
T cd07137         238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER----  311 (432)
T ss_pred             CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc----
Confidence            9999999999999999999999999999999999999 568899999999999999999999998 8999999974    


Q ss_pred             CCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          408 EGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       408 ~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                       ...|+|++|||+.+++++|++++||+||||+
T Consensus       312 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  342 (432)
T cd07137         312 -DEKNLYIEPTILLDPPLDSSIMTEEIFGPLL  342 (432)
T ss_pred             -CCCCCEEeeEEEecCCCcchhhhcccccCce
Confidence             1368999999999999999999999999985

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=2.4e-69  Score=553.45  Aligned_cols=334  Identities=30%  Similarity=0.447  Sum_probs=307.5

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      +.+++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||++.++...|+..+++.++|+++.++++...+
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            56899999999999999999999999999999999999999999999999999976799999999999999887765543


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      ..+......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++    + +|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~----a-lP~  156 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE----T-FDE  156 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH----h-CCC
Confidence            22221111234578899999999999999999999999999999999999999999999999988888775    4 999


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS  328 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~  328 (439)
                      |++|+++|+++.+..|++ .+|.|+||||+++|+.|++.++++++|+++|+|||||+||++|+|+|.+++.+++++|.|+
T Consensus       157 gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~  236 (449)
T cd07136         157 EYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNA  236 (449)
T ss_pred             CEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHccc
Confidence            999999997788888988 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC
Q 013608          329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE  408 (439)
Q Consensus       329 GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~  408 (439)
                      ||.|++++|||||+++||+|+++|++++++++.|+|.+ ++++||++++.++++++++|+++     ++++||..     
T Consensus       237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-----  305 (449)
T cd07136         237 GQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-----  305 (449)
T ss_pred             CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-----
Confidence            99999999999999999999999999999999999987 88999999999999999999863     89999974     


Q ss_pred             CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          409 GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       409 ~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ..+|+|++|||+.+++++|.+++||+||||+
T Consensus       306 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl  336 (449)
T cd07136         306 DRETLYIEPTILDNVTWDDPVMQEEIFGPIL  336 (449)
T ss_pred             CCCCCEEeeEEEecCCCcChHHhccccCCee
Confidence            1368999999999999999999999999985

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=5.8e-69  Score=550.89  Aligned_cols=340  Identities=33%  Similarity=0.500  Sum_probs=310.8

Q ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC-hhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           91 RVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT-MVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        91 av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~-~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      .+++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+ ..++..+|+..+++.++|++++.++++.+.
T Consensus         3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~   82 (434)
T cd07133           3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS   82 (434)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            5788999999999999999999999999999999999999999999985 567766799999999999999988776654


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      .............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++++    + +|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~----a-lP~  157 (434)
T cd07133          83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE----Y-FDE  157 (434)
T ss_pred             ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----h-CCc
Confidence            43322112234568899999999999999999999999999999999999999999999999988888776    3 899


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS  328 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~  328 (439)
                      |++|+++|+.+.++.|+. .+|.|+||||+.+|++|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+
T Consensus       158 g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~  237 (434)
T cd07133         158 DEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA  237 (434)
T ss_pred             CeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccC
Confidence            999999997778888888 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC
Q 013608          329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE  408 (439)
Q Consensus       329 GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~  408 (439)
                      ||.|++++|||||++++|+|+++|.++++++++|+  ++++++||++++.++++++++|++++++||++++||.....  
T Consensus       238 GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--  313 (434)
T cd07133         238 GQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED--  313 (434)
T ss_pred             CCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC--
Confidence            99999999999999999999999999999999996  46789999999999999999999999999999999974321  


Q ss_pred             CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          409 GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       409 ~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl  344 (434)
T cd07133         314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPIL  344 (434)
T ss_pred             CCCCcEEeeEEEeCCCCCCcccccccCCCee
Confidence            2468999999999999999999999999985

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=8e-69  Score=549.71  Aligned_cols=340  Identities=31%  Similarity=0.483  Sum_probs=314.1

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      +++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+..++...|+..+++.+++++.+..++....
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999866899999999999998877665543


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      ..+....+.+...++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++++    + +|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~----a-~p~  156 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE----A-FDE  156 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH----h-CCc
Confidence            33222212345678999999999999999999999999999999999999999999999999888888776    5 899


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS  328 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~  328 (439)
                      |++|+++|+.+.+..|++ .++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.++
T Consensus       157 g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~  236 (433)
T cd07134         157 DEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNA  236 (433)
T ss_pred             CEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCc
Confidence            999999997788888998 8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCC
Q 013608          329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS  407 (439)
Q Consensus       329 GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~  407 (439)
                      ||.|++++|||||++++|+|+++|++++++++.|+| .+.++++||++++.++++++++|++++++||++++||..    
T Consensus       237 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~----  312 (433)
T cd07134         237 GQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF----  312 (433)
T ss_pred             CCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc----
Confidence            999999999999999999999999999999988887 788899999999999999999999999999999999973    


Q ss_pred             CCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          408 EGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       408 ~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                       ...|+|++|||+.++++||++++||+||||+
T Consensus       313 -~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl  343 (433)
T cd07134         313 -DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVL  343 (433)
T ss_pred             -CCCCCEEeeEEEeCCCCccHHHhccccCceE
Confidence             2358999999999999999999999999985

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=1e-68  Score=549.91  Aligned_cols=337  Identities=30%  Similarity=0.388  Sum_probs=308.2

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhc
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL  166 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l  166 (439)
                      |+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+||+..++ ..|+..+++.++|+++...++ 
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~-   78 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQI-   78 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHh-
Confidence            578999999999999999999999999999999999999999999999999998777 469999999999999887764 


Q ss_pred             CCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 013608          167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG  246 (439)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG  246 (439)
                      .....+..  ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.    ++|
T Consensus        79 ~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~----~aG  152 (432)
T cd07105          79 IGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH----EAG  152 (432)
T ss_pred             cCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHH----HcC
Confidence            22222221  123456789999999999999999999999999999999999999999999999987777655    499


Q ss_pred             CCCCcEEEEeCCh----hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHH
Q 013608          247 APENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA  320 (439)
Q Consensus       247 ~p~~~v~~v~~~~----~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i  320 (439)
                      +|+|++|+++++.    +.++.|++  ++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+
T Consensus       153 lP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i  232 (432)
T cd07105         153 LPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAA  232 (432)
T ss_pred             cCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHH
Confidence            9999999999853    35788887  79999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608          321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR  400 (439)
Q Consensus       321 ~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g  400 (439)
                      +++.|.|+||.|+++++||||+++||+|+++|.++++++++|     ++++||++++.++++++++|++++++|+++++|
T Consensus       233 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~g  307 (432)
T cd07105         233 LFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVG  307 (432)
T ss_pred             HHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence            999999999999999999999999999999999999999998     579999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |....   .+.|.|++|||+.+++++|++++||+||||+
T Consensus       308 g~~~~---~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl  343 (432)
T cd07105         308 GLADE---SPSGTSMPPTILDNVTPDMDIYSEESFGPVV  343 (432)
T ss_pred             CCcCC---CCCCeEEeeEEEecCCCCCHHHhCCCcCCeE
Confidence            98532   1468999999999999999999999999985

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.6e-68  Score=549.18  Aligned_cols=338  Identities=30%  Similarity=0.448  Sum_probs=310.8

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhc
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL  166 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l  166 (439)
                      |+++++++|++|++.|++++..+|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++.+++++....+..
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~   79 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999999999999999999884 699999999999998766542


Q ss_pred             CCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH-HHHHHHHHHHHHhc
Q 013608          167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAV  245 (439)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~a  245 (439)
                      . ...+..  ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+    .++|.++
T Consensus        80 ~-~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l----~~~l~~a  152 (431)
T cd07104          80 G-EILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLI----AEIFEEA  152 (431)
T ss_pred             C-ccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHH----HHHHHHc
Confidence            2 222211  1234578899999999999999999999999999999999999999999999874 344    4556669


Q ss_pred             CCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHH
Q 013608          246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR  322 (439)
Q Consensus       246 G~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~  322 (439)
                      |+|+|++|+++++. +.++.|++  ++|.|+||||+.+++.|++.++++++|+++|+|||||+||++|+|++.|++.+++
T Consensus       153 GlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~  232 (431)
T cd07104         153 GLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAF  232 (431)
T ss_pred             CCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHH
Confidence            99999999999865 57888887  8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Q 013608          323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS  402 (439)
Q Consensus       323 ~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~  402 (439)
                      ++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.
T Consensus       233 ~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~  312 (431)
T cd07104         233 GAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGT  312 (431)
T ss_pred             HHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       403 ~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                             ..|+|++|||+.+++++|++++||+||||+
T Consensus       313 -------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  342 (431)
T cd07104         313 -------YEGLFYQPTVLSDVTPDMPIFREEIFGPVA  342 (431)
T ss_pred             -------CCCceECCEEeecCCCCChhhhCcCcCCeE
Confidence                   258999999999999999999999999985

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=6.5e-68  Score=589.92  Aligned_cols=352  Identities=21%  Similarity=0.370  Sum_probs=327.9

Q ss_pred             CCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 013608           63 ETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV  141 (439)
Q Consensus        63 ~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~  141 (439)
                      +..++++||+| ++++++++.++++++++++++|++||+.|+.+|+++|.++|+++++.|++++++|++++++|+||+..
T Consensus       566 ~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~  645 (1208)
T PRK11905        566 GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLA  645 (1208)
T ss_pred             CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence            45789999999 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEE
Q 013608          142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI  221 (439)
Q Consensus       142 ~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVl  221 (439)
                      ++ ..|+..+++.++|++..+++...               ...++|+|||++|+|||||+..+++++++||++||+||+
T Consensus       646 ea-~~Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~  709 (1208)
T PRK11905        646 NA-IAEVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLA  709 (1208)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEE
Confidence            99 58999999999999988765421               135689999999999999999999999999999999999


Q ss_pred             ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CCce
Q 013608          222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPV  295 (439)
Q Consensus       222 Kps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~pv  295 (439)
                      |||+++|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  ++++|+||||+++|+.|.+.++++   ++|+
T Consensus       710 KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pl  785 (1208)
T PRK11905        710 KPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL  785 (1208)
T ss_pred             eCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeE
Confidence            9999999999988877665    999999999999976 58899987  999999999999999999999976   4999


Q ss_pred             EEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccC
Q 013608          296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC  375 (439)
Q Consensus       296 ~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli  375 (439)
                      ++|+||||++||++|||+|.+++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|+|.+.++++||+|
T Consensus       786 i~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvI  865 (1208)
T PRK11905        786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVI  865 (1208)
T ss_pred             EEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          376 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       376 ~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++.+++++.++|++++++|++++.||...   ....|+|++|||+. + ++|.++++|+||||+
T Consensus       866 d~~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL  924 (1208)
T PRK11905        866 DAEAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVL  924 (1208)
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceE
Confidence            99999999999999999999988876421   12579999999996 3 689999999999985

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=8.8e-68  Score=543.16  Aligned_cols=334  Identities=29%  Similarity=0.436  Sum_probs=305.6

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      +++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.++|+++.+.++....
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999877899999999999999888775443


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      .............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+     ++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~-----~lp~  156 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK-----YLDK  156 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCc
Confidence            22221111234578999999999999999999999999999999999999999999999999988888764     4999


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS  328 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~  328 (439)
                      |++|+++++++.+..|+. .+|.|+||||+.+|++|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.++
T Consensus       157 gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~  236 (443)
T cd07132         157 ECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINA  236 (443)
T ss_pred             CeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcC
Confidence            999999997767777877 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC
Q 013608          329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE  408 (439)
Q Consensus       329 GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~  408 (439)
                      ||.|++++|||||+++||+|+++|.+++++++.|++ ++++++|||++++++++++++|+     ++++++||..     
T Consensus       237 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~-----~a~~~~gg~~-----  305 (443)
T cd07132         237 GQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLS-----GGKVAIGGQT-----  305 (443)
T ss_pred             CCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHh-----CCEEEeCCcc-----
Confidence            999999999999999999999999999999998888 68889999999999999999987     3599999974     


Q ss_pred             CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          409 GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       409 ~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ...|+|++|||+.+++++|++++||+||||+
T Consensus       306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl  336 (443)
T cd07132         306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPIL  336 (443)
T ss_pred             CCCCCEEeeEEEeCCCCCChHHhccccCcee
Confidence            2368999999999999999999999999985

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=2.3e-67  Score=533.69  Aligned_cols=314  Identities=30%  Similarity=0.456  Sum_probs=288.2

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEE
Q 013608          114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG  193 (439)
Q Consensus       114 L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~  193 (439)
                      |+++++.|++|+++|++++++|+||+..++. +|+..+++.++|+++..+........+.   ......+++++|+|||+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~   76 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSD---RPGENILLFKRALGVTT   76 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCC---CCCceeEEEEecccEEE
Confidence            5789999999999999999999999999995 7999999999999988776433211111   12235688999999999


Q ss_pred             EEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcC
Q 013608          194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVD  270 (439)
Q Consensus       194 ~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~  270 (439)
                      +|+|||||+...++++++||++||+||+|||+.+|+++..+.+++++    +|+|+|++|+++|++ +.++.|++  .+|
T Consensus        77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~~~v~  152 (409)
T PRK10090         77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVGQELAGNPKVA  152 (409)
T ss_pred             EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHHHHHhcCCCcC
Confidence            99999999999999999999999999999999999999988777664    899999999999954 67888887  999


Q ss_pred             EEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHH
Q 013608          271 KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS  350 (439)
Q Consensus       271 ~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~  350 (439)
                      +|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus       153 ~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~  232 (409)
T PRK10090        153 MVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN  232 (409)
T ss_pred             EEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcc
Q 013608          351 QVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL  429 (439)
Q Consensus       351 ~L~~~~~~l~~G~~~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i  429 (439)
                      +|.++++++++|+|.++ ++++|||+++.++++++++|++++++||++++||.+.    ...|+|++|||+.+++++|++
T Consensus       233 ~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i  308 (409)
T PRK10090        233 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSI  308 (409)
T ss_pred             HHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHH
Confidence            99999999999999987 8999999999999999999999999999999999853    235899999999999999999


Q ss_pred             cccCccccCC
Q 013608          430 MQEEIILWVS  439 (439)
Q Consensus       430 ~~~E~FgPv~  439 (439)
                      ++||+||||+
T Consensus       309 ~~eE~FgPvl  318 (409)
T PRK10090        309 MHEETFGPVL  318 (409)
T ss_pred             HhCCCCCceE
Confidence            9999999985

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=1.3e-65  Score=525.43  Aligned_cols=334  Identities=32%  Similarity=0.464  Sum_probs=303.1

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCc
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPE  169 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~  169 (439)
                      +++++|++||..|+.+|+.+|.++|++++++|++++++|++++++|+||+..++...|+..+++.++++++...++....
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            48899999999999999999999999999999999999999999999999888766799999999999998877665433


Q ss_pred             ccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC
Q 013608          170 YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE  249 (439)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~  249 (439)
                      .............+++++|+|||++|+|||||+...++.+++||++||+||+|||+.+|+++.++.+++.+     |+|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-----~~P~  156 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-----YFDP  156 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-----hCCC
Confidence            22111111234568899999999999999999999999999999999999999999999999888887764     6999


Q ss_pred             CcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhcc
Q 013608          250 NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS  328 (439)
Q Consensus       250 ~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~  328 (439)
                      |++|+++|+.+.+..|++ .+|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.++++.|.++
T Consensus       157 gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~  236 (426)
T cd07087         157 EAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNA  236 (426)
T ss_pred             CEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhcc
Confidence            999999997778888888 7999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC
Q 013608          329 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE  408 (439)
Q Consensus       329 GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~  408 (439)
                      ||.|++++|||||++++|+|+++|.+++++++.|+| ++++++||++++.++++++++++++     ++++||..     
T Consensus       237 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-----  305 (426)
T cd07087         237 GQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-----  305 (426)
T ss_pred             CCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----
Confidence            999999999999999999999999999999986666 4688999999999999999999865     89999973     


Q ss_pred             CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          409 GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       409 ~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ...|+|++|||+.+++++|++++||+||||+
T Consensus       306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  336 (426)
T cd07087         306 DKEERYIAPTILDDVSPDSPLMQEEIFGPIL  336 (426)
T ss_pred             CCCCCEEeeEEEecCCCCCHHHhcccccceE
Confidence            2368999999999999999999999999985

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.6e-66  Score=494.56  Aligned_cols=337  Identities=28%  Similarity=0.434  Sum_probs=317.9

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK  167 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~  167 (439)
                      +++.++++|.+|.+-++.+.+.|.+.|.++.+++++|.++|.+++..|.+|+..++...|+...++.++++..+..+|.+
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            55669999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 013608          168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA  247 (439)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~  247 (439)
                      ++..+.+......+.+++.+|+|||++|+|||||+...+.++++||+|||+||+||||.+|.++..+++++-+.     +
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-----l  158 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-----L  158 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-----c
Confidence            98888766656678899999999999999999999999999999999999999999999999999999998875     7


Q ss_pred             CCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHh
Q 013608          248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ  326 (439)
Q Consensus       248 p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~  326 (439)
                      |.+++.+|.|..+....|+. +.|+|+||||+.+|+.|+.+|+++++||+||||||+|++|++|+|++-++++|.||++.
T Consensus       159 d~~~~~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~  238 (477)
T KOG2456|consen  159 DQDLIRVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWM  238 (477)
T ss_pred             CcceEEEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhc
Confidence            99999999998766667777 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Q 013608          327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL  406 (439)
Q Consensus       327 ~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~  406 (439)
                      |+||.|++++.|+++.+++.+|+++++..++++ .|....++.|++.||+..+++|+..++++-    .+++.||+.   
T Consensus       239 N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~---  310 (477)
T KOG2456|consen  239 NSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES---  310 (477)
T ss_pred             cCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc---
Confidence            999999999999999999999999999999998 688888999999999999999999998753    489999994   


Q ss_pred             CCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          407 SEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       407 ~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                        .+...|++||||.||+++.++|+||+||||+
T Consensus       311 --d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiL  341 (477)
T KOG2456|consen  311 --DESDRYIAPTILLDVPEDSPVMQEEIFGPIL  341 (477)
T ss_pred             --chhhcccCCeEEecCCCCChhhhhhhccCcc
Confidence              3556699999999999999999999999996

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=2.3e-65  Score=521.78  Aligned_cols=323  Identities=17%  Similarity=0.176  Sum_probs=281.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHH--HHHHHHhhhhh
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK--ITWLLSEGEKW  165 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~--l~~~~~~~~~~  165 (439)
                      +++++++|++||+.|+++|+.+|.++|+++++.|++|+++|++++++|+||++.+++ .++......  .+++...    
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~~----   75 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKDE----   75 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhcc----
Confidence            478999999999999999999999999999999999999999999999999999885 455444432  2332221    


Q ss_pred             cCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhc
Q 013608          166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV  245 (439)
Q Consensus       166 l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~a  245 (439)
                      ...+..+..   .....+++++|+|||++|+|||||+..+++++++||++||+||+|||+++|+++..+.++++++|.++
T Consensus        76 ~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a  152 (439)
T cd07081          76 KTCGVLTGD---ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA  152 (439)
T ss_pred             ccCceecCC---CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence            111111111   12345789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHH
Q 013608          246 GAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR  322 (439)
Q Consensus       246 G~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~  322 (439)
                      |+|+|++|+|++.+ +.++.|++  ++++|+||||+.    +++.++++++|+++|+|||||+||++|||+|.|++.+++
T Consensus       153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~  228 (439)
T cd07081         153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK  228 (439)
T ss_pred             CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence            99999999999854 77889997  899999999997    567788889999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Q 013608          323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS  402 (439)
Q Consensus       323 ~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~  402 (439)
                      |+|.++||.|++.+|+|||+++||+|+++|.++.               ||+++.+++++++++|++++++||+++ ||.
T Consensus       229 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~  292 (439)
T cd07081         229 SKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQD  292 (439)
T ss_pred             HHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCC
Confidence            9999999999999999999999999999999873               899999999999999999999999875 443


Q ss_pred             CCCCCCCCCCceeccE---EEecCC--CCCcccccCccccCC
Q 013608          403 FGHLSEGAVDQYFPPT---VIVNVN--HTMKLMQEEIILWVS  439 (439)
Q Consensus       403 ~~~~~~~~~g~~~~PT---vl~~v~--~~~~i~~~E~FgPv~  439 (439)
                      .... ....|+|++||   ++.+++  ++|++++||+||||+
T Consensus       293 ~~~~-~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl  333 (439)
T cd07081         293 AYKI-AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVL  333 (439)
T ss_pred             HHHH-HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceE
Confidence            1110 11358899998   999988  999999999999985

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=1.1e-64  Score=522.24  Aligned_cols=336  Identities=21%  Similarity=0.239  Sum_probs=299.5

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhh--
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW--  165 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~--  165 (439)
                      +++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+..++. +|+..+++.++++++..++.  
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~   79 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW   79 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999999999999999999999998874 79999999999999876542  


Q ss_pred             cCCccc---CCCccccccceeEEEeeccEEEEEcCCCcchhh--hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHH
Q 013608          166 LKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN--IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA  240 (439)
Q Consensus       166 l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~--~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~  240 (439)
                      ......   +..........+++++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|+++.++.+++.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~  159 (454)
T cd07129          80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA  159 (454)
T ss_pred             ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence            111110   100001123457889999999999999999987  458999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhc--cCCceEEEcCCCceEEecCCC---C
Q 013608          241 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIVCDDV---D  312 (439)
Q Consensus       241 ~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~--~l~pv~lelgGk~~~iV~~da---D  312 (439)
                      +|.++|+|+|++|+|+|++ +.++.|++  .+|.|+||||+.+|+.|++.+++  +++|+++|+|||||+||++|+   |
T Consensus       160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d  239 (454)
T cd07129         160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER  239 (454)
T ss_pred             HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence            9999999999999999965 78889987  89999999999999999999998  699999999999999999999   8


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 013608          313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL  391 (439)
Q Consensus       313 l~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~  391 (439)
                      ++.+++.+++|+|.|+||.|++++|||||++ ++|+|+++|.++++++++|          |++++...+++.+.|++++
T Consensus       240 l~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~  309 (454)
T cd07129         240 GEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALA  309 (454)
T ss_pred             HHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 9999999999999999764          5677777788888999999


Q ss_pred             HC-CCEEEeCCCCCCCCCCCCCceeccEEEecCC---CCCcccccCccccCC
Q 013608          392 DK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVN---HTMKLMQEEIILWVS  439 (439)
Q Consensus       392 ~~-Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~---~~~~i~~~E~FgPv~  439 (439)
                      ++ ||++++||...     .+|+|++|||+...+   ++|++++||+||||+
T Consensus       310 ~~~ga~~l~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~  356 (454)
T cd07129         310 AAPGVRVLAGGAAA-----EGGNQAAPTLFKVDAAAFLADPALQEEVFGPAS  356 (454)
T ss_pred             hcCCcEEEeCCCcC-----CCCCccCCEEEEccCCccccchhhcccCCCCeE
Confidence            98 99999999732     468999999998665   699999999999985

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=4.2e-64  Score=515.77  Aligned_cols=334  Identities=18%  Similarity=0.208  Sum_probs=293.5

Q ss_pred             HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhh-cC
Q 013608           89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW-LK  167 (439)
Q Consensus        89 ~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~-l~  167 (439)
                      ++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+. ++ ..|+..+++.++|++..+... +.
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~   79 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIP   79 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhcccc
Confidence            6789999999999999999999999999999999999999999999999999 65 479999999999998887643 11


Q ss_pred             CcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 013608          168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA  247 (439)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~  247 (439)
                      ...............+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|+++..+.+++++    +|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~----ag~  155 (442)
T cd07084          80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHY----AGL  155 (442)
T ss_pred             ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHH----hCC
Confidence            1111000000123568899999999999999999999999999999999999999999999999988888776    788


Q ss_pred             -CCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCC-CHHHHHHHHHHH
Q 013608          248 -PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRA  323 (439)
Q Consensus       248 -p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~da-Dl~~aa~~i~~~  323 (439)
                       |++++|+++++.+.+..|++  ++|.|+||||+++|++|++.+++  +|+++|+|||||+||++|+ |++.+++.++++
T Consensus       156 ~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~  233 (442)
T cd07084         156 LPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD  233 (442)
T ss_pred             CCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence             99999999997778888887  89999999999999999998875  8999999999999999999 699999999999


Q ss_pred             HHhccCCCCCCCceeEEehh-hHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCC
Q 013608          324 ALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARG  401 (439)
Q Consensus       324 ~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gG  401 (439)
                      +|.|+||.|++++|+|||++ ++|+|+++|.++++++++|     ++++||++++    ++.++|++++++ |+++++||
T Consensus       234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg  304 (442)
T cd07084         234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG  304 (442)
T ss_pred             HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence            99999999999999999999 9999999999999999999     5789999765    456667777788 59999999


Q ss_pred             CCCCCCC--CCCCceeccEEEecCCCCC---cccccCccccCC
Q 013608          402 SFGHLSE--GAVDQYFPPTVIVNVNHTM---KLMQEEIILWVS  439 (439)
Q Consensus       402 ~~~~~~~--~~~g~~~~PTvl~~v~~~~---~i~~~E~FgPv~  439 (439)
                      ....++.  ...|+|++|||+.+++++|   ++++||+||||+
T Consensus       305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl  347 (442)
T cd07084         305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFA  347 (442)
T ss_pred             cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceE
Confidence            7543211  2258999999999999998   999999999985

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=1e-63  Score=509.56  Aligned_cols=326  Identities=20%  Similarity=0.281  Sum_probs=282.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhh
Q 013608           85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK  164 (439)
Q Consensus        85 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~  164 (439)
                      -+|+++++++|++||+.|++++.++|.++|+++++.|++|.++|++++++|+||+..++.       ++.++|+++....
T Consensus         3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~   75 (429)
T cd07121           3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPG   75 (429)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCc
Confidence            368999999999999999999999999999999999999999999999999999987663       4456665543211


Q ss_pred             hcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHh
Q 013608          165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA  244 (439)
Q Consensus       165 ~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~  244 (439)
                      . . ...+..........+++|+|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++++++++++.+
T Consensus        76 ~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~  153 (429)
T cd07121          76 T-E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE  153 (429)
T ss_pred             c-c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence            0 0 0001100011234578899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHH
Q 013608          245 VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV  321 (439)
Q Consensus       245 aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~  321 (439)
                      +|+|+|++|++++. .+.++.|++  ++|+|+||||+.+|+.|++.    .+|+++|+|||||+||++|||++.|++.++
T Consensus       154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~  229 (429)
T cd07121         154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV  229 (429)
T ss_pred             cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence            99999999999985 477889987  89999999999999999975    499999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC--CCEEEe
Q 013608          322 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK--GAEILA  399 (439)
Q Consensus       322 ~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~~l~  399 (439)
                      +|+|.|+||.|++++|||||+++||+|+++|+++      |         .+++++++++++.++|+++++.  |+++++
T Consensus       230 ~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~  294 (429)
T cd07121         230 QGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV  294 (429)
T ss_pred             hcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence            9999999999999999999999999999999886      1         1378999999999999999875  799999


Q ss_pred             CCCCCCCCCCCCCceec---cEEEecCCCCCcccccCccccCC
Q 013608          400 RGSFGHLSEGAVDQYFP---PTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       400 gG~~~~~~~~~~g~~~~---PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ||.+.. +....|.|++   |||+.+++++|++++||+||||+
T Consensus       295 gg~~~~-~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl  336 (429)
T cd07121         295 GKDASK-ILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPIL  336 (429)
T ss_pred             CcCHHH-HHHHcCCCCCCCCeEEEEecCCCCCccccccccceE
Confidence            986311 0012477877   59999999999999999999985

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=3e-62  Score=503.06  Aligned_cols=340  Identities=35%  Similarity=0.522  Sum_probs=314.7

Q ss_pred             HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCC
Q 013608           89 DERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP  168 (439)
Q Consensus        89 ~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~  168 (439)
                      ++++++|++|++.|+.++.++|.++|+++++.|.+++++|+++++.|+||+..++ ..|+..+++.+++++...+++..+
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~-~~ei~~~i~~l~~~~~~~~~~~~~   79 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEA-LGEVARAADTFRYYAGLARRLHGE   79 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc
Confidence            3689999999999999999999999999999999999999999999999988776 679999999999999888876654


Q ss_pred             cccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCC
Q 013608          169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP  248 (439)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p  248 (439)
                      ...+.   ..+..++++++|+|||++|+|||||+.+.++++++||++||+||+|||+++|+++..+.+++++    +|+|
T Consensus        80 ~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~----ag~p  152 (432)
T cd07078          80 VIPSP---DPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAE----AGLP  152 (432)
T ss_pred             ccccc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCC
Confidence            43211   1346678899999999999999999999999999999999999999999999999988877665    8999


Q ss_pred             CCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHH
Q 013608          249 ENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL  325 (439)
Q Consensus       249 ~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f  325 (439)
                      ++++++++++.+ .+..|++  .+|.|.||||..+++.|.+.++++++|+++|+||||++||++|+|++.+++.+++++|
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~  232 (432)
T cd07078         153 PGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF  232 (432)
T ss_pred             cCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence            999999998764 7778887  7899999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC
Q 013608          326 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH  405 (439)
Q Consensus       326 ~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~  405 (439)
                      .++||.|+++++||||++++|+|+++|.++++++++|+|+++++++||++++.++++++++|++++++|+++++||....
T Consensus       233 ~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~  312 (432)
T cd07078         233 GNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLE  312 (432)
T ss_pred             hccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998543


Q ss_pred             CCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       406 ~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .   +.|+|++|||+.+++++|+++++|+||||+
T Consensus       313 ~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl  343 (432)
T cd07078         313 G---GKGYFVPPTVLTDVDPDMPIAQEEIFGPVL  343 (432)
T ss_pred             C---CCCcEEccEEEecCCCCChhhhCCCcCceE
Confidence            2   268999999999999999999999999985

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=1.3e-62  Score=505.40  Aligned_cols=327  Identities=21%  Similarity=0.282  Sum_probs=283.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      ....+|+++++++|++||..|+.++.++|.++|+++++.|++|+++|++++++|+||+..+++.       +.+++++++
T Consensus        32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~  104 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK  104 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence            4568899999999999999999999999999999999999999999999999999999887742       344555554


Q ss_pred             hh--hhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHH
Q 013608          162 GE--KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ  239 (439)
Q Consensus       162 ~~--~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~  239 (439)
                      ..  ..+.......    .....+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++++
T Consensus       105 ~~~~~~~~~~~~~~----~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~  180 (465)
T PRK15398        105 TPGVEDLTTEALTG----DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN  180 (465)
T ss_pred             hccccccccCcccC----CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence            32  1121111111    12346788999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHH
Q 013608          240 AALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV  316 (439)
Q Consensus       240 ~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~a  316 (439)
                      ++|.++|+|+|++|++++. .+.++.|++  ++|+|+||||+.+|+.|++    +.+|+++|+|||||+||++|||++.|
T Consensus       181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~A  256 (465)
T PRK15398        181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKA  256 (465)
T ss_pred             HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHH
Confidence            9999999999999999984 477889987  7999999999999999998    35999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCE
Q 013608          317 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE  396 (439)
Q Consensus       317 a~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~  396 (439)
                      ++.+++|+|.|+||.|++++|||||+++||+|+++|+++      +         +|++++.++++++++++++.++|++
T Consensus       257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~  321 (465)
T PRK15398        257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNK  321 (465)
T ss_pred             HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccch
Confidence            999999999999999999999999999999999999986      1         2689999999999999976556778


Q ss_pred             EEeCCCCCCCCCCCCCcee---ccEEEecCCCCCcccccCccccCC
Q 013608          397 ILARGSFGHLSEGAVDQYF---PPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       397 ~l~gG~~~~~~~~~~g~~~---~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++.||..... ....|.|+   +|||+.++++||++++||+||||+
T Consensus       322 ~~~g~~~~~i-~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl  366 (465)
T PRK15398        322 KWVGKDAAKI-LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVL  366 (465)
T ss_pred             hhhCCCHHHH-HHhCCCCCCCCCCEEEecCCCCCchhcccccCceE
Confidence            8887652100 01236555   489999999999999999999986

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=2.3e-61  Score=498.99  Aligned_cols=329  Identities=17%  Similarity=0.158  Sum_probs=292.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      ..+.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+||+..+++..+...+.+.+.+++..
T Consensus         4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~   83 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD   83 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence            46788999999999999999999999999999999999999999999999999999998877543444566666665553


Q ss_pred             hhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608          162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA  241 (439)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~  241 (439)
                      .+. .. . ....   .+...+..++|+|||++|+|||||+..+.+++++||++||+||+|||+.+|+++..++++++++
T Consensus        84 ~~~-~G-~-~~~~---~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~  157 (488)
T TIGR02518        84 MKT-IG-I-LSED---KEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA  157 (488)
T ss_pred             Ccc-cc-e-ecCC---CCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHH
Confidence            221 11 1 1111   1234577899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHH
Q 013608          242 LAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ  318 (439)
Q Consensus       242 l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~  318 (439)
                      +.++|+|+|++|++++. .+.++.|++  ++|.|+||||+.++    +.++++++|+++|+|||+|+||++|||++.|++
T Consensus       158 l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~  233 (488)
T TIGR02518       158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVR  233 (488)
T ss_pred             HHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence            99999999999999984 478899987  89999999999965    444556899999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHH-------HHhCccCCC-CCCCCcccccCCHHHHHHHHHHHHHH
Q 013608          319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI-------VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDA  390 (439)
Q Consensus       319 ~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~-------~~~l~~G~~-~~~~~~~Gpli~~~~~~~~~~~i~~a  390 (439)
                      .+++|+|+++||.|++.+|||||+++||+|+++|.++       .+++++|+| .++++++||+++..+++++.++++++
T Consensus       234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~a  313 (488)
T TIGR02518       234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLT  313 (488)
T ss_pred             HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccc
Confidence            9999999999999999999999999999999999999       899999996 56888999999999999999999999


Q ss_pred             HHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +.+||++++||..                  +++++|++ ++|.||||+
T Consensus       314 v~~gakll~gg~~------------------~v~~~~~~-~~E~fgPVl  343 (488)
T TIGR02518       314 VPEDAKVLIGEQN------------------GVGNKNPY-SREKLTTIL  343 (488)
T ss_pred             cCCCCEEEEeCCC------------------CCCCCCcc-ccCccCceE
Confidence            9999999999972                  25778886 799999985

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=3e-62  Score=498.01  Aligned_cols=322  Identities=20%  Similarity=0.207  Sum_probs=285.9

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH-HHHHHHHhhhhhc
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE-KITWLLSEGEKWL  166 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~-~l~~~~~~~~~~l  166 (439)
                      +++++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||++.+++..|+..+++ .++|+...  +..
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            478999999999999999999999999999999999999999999999999999987558888887 77777752  211


Q ss_pred             CCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC
Q 013608          167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG  246 (439)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG  246 (439)
                      . ...+.    .....+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++++++|.++|
T Consensus        79 g-~~~~~----~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG  153 (436)
T cd07122          79 G-VIEED----EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG  153 (436)
T ss_pred             e-eeccC----CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence            1 11111    123467899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHH
Q 013608          247 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA  323 (439)
Q Consensus       247 ~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~  323 (439)
                      +|+|++|++++.+ +.++.|++  ++|.|.||||+.++    +.++++++|+++|+|||||+||++|||++.|++.+++|
T Consensus       154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~  229 (436)
T cd07122         154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS  229 (436)
T ss_pred             CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            9999999999854 67888887  89999999999965    45667899999999999999999999999999999999


Q ss_pred             HHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhC-------ccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHCCC
Q 013608          324 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV-------SAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGA  395 (439)
Q Consensus       324 ~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l-------~~G~~~-~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  395 (439)
                      +|.|+||.|++++|||||+++||+|+++|.++...+       ++|++. +.++++||+++..+.+++..++..++..|+
T Consensus       230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga  309 (436)
T cd07122         230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDT  309 (436)
T ss_pred             hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCC
Confidence            999999999999999999999999999999999887       889884 667789999999999999888888888888


Q ss_pred             EEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       396 ~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++.||                  +.+++++|+++ +|.||||+
T Consensus       310 ~vl~~~------------------~~~v~~~~~~~-~E~FGPVl  334 (436)
T cd07122         310 KVLVAE------------------ETGVGPEEPLS-REKLSPVL  334 (436)
T ss_pred             eEEEEe------------------cCCCCCCCcch-hcccCCeE
Confidence            887666                  35788999988 56799985

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.2e-59  Score=459.67  Aligned_cols=353  Identities=21%  Similarity=0.364  Sum_probs=320.3

Q ss_pred             CCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 013608           62 SETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM  140 (439)
Q Consensus        62 ~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~  140 (439)
                      +++..+++||++ ...+++|..++++|+++|++.|..|+..|+.++..+|..+|++++++++.+..+|..++++|-||++
T Consensus       125 ~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl  204 (769)
T COG4230         125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTL  204 (769)
T ss_pred             CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence            467899999998 4568999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEE
Q 013608          141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV  220 (439)
Q Consensus       141 ~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VV  220 (439)
                      .++ ..|+..+++++|||+...+.-+..               ..++|+|.|.+|+|||||+..+.+.+++||++||+|+
T Consensus       205 ~na-IAEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~Vl  268 (769)
T COG4230         205 SNA-IAEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVL  268 (769)
T ss_pred             hhH-HHHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccc
Confidence            999 689999999999999987652221               2447999999999999999999999999999999999


Q ss_pred             EecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CCc
Q 013608          221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTP  294 (439)
Q Consensus       221 lKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~p  294 (439)
                      -||.|++|+.+..-++++++    +|+|++++|+++|+++ .+..|+.  ++++|+||||+++++.|.++.+++   ..|
T Consensus       269 AKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~p  344 (769)
T COG4230         269 AKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIP  344 (769)
T ss_pred             cCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCc
Confidence            99999999999888777665    9999999999999985 7899998  999999999999999999998873   588


Q ss_pred             eEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCccccc
Q 013608          295 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL  374 (439)
Q Consensus       295 v~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpl  374 (439)
                      ++.|.||.|.+||+.+|--|.++..++.|+|.++||.|++.+.+++++++.|..+++|+-.+..+++|+|..-.+|+||+
T Consensus       345 LIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPV  424 (769)
T COG4230         345 LIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPV  424 (769)
T ss_pred             eEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999889999999


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          375 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       375 i~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+.+..+.++++|+..+..|-++ +.-...  ++..+|.|+.||++.  -++..-++.|+||||+
T Consensus       425 IdaEAk~~i~~Hi~~mr~~gr~v-~q~~~~--~~~q~GtFv~Ptl~E--l~~~~eL~rEVFGPVL  484 (769)
T COG4230         425 IDAEAKANIEKHIQTMRSKGRLV-HQAAAP--NSLQKGTFVAPTLIE--LENLDELQREVFGPVL  484 (769)
T ss_pred             ccHHHHHHHHHHHHHHHhcccch-hhccCC--CccCCceeeCceeEE--cCCHHHHHHHhcccee
Confidence            99999999999999988888444 322211  112579999999996  3455567889999996

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=2.8e-59  Score=451.47  Aligned_cols=362  Identities=25%  Similarity=0.367  Sum_probs=323.2

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHH--HhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV--WAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      +-++||+|+|++++++++...+||+||.+|++++.++..|+|+|+++|+.||+.  |.++|..+|.+.|.++++++++|+
T Consensus       421 ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~  500 (881)
T KOG2452|consen  421 PHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQ  500 (881)
T ss_pred             cHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhcc
Confidence            457999999999999999999999999999999999999999999999999974  999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccc-cccceeEEEeeccEEEEEcCCCcchhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-IHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      ++|+.+.++|.|.-..-+.-.-+-.+++..||++.+.++... ...|-+... -..-+.++++|+|||++|.|||||+..
T Consensus       501 eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmm  579 (881)
T KOG2452|consen  501 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMM  579 (881)
T ss_pred             chhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHHH
Confidence            999999999999755544334566688899999999888643 333322111 123457899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      +-|+.+++|++--              ..+++           -.|++|+++|++. .++.|..  ++++|-||||+++|
T Consensus       580 lswk~aaclaa~~--------------~k~~e-----------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig  634 (881)
T KOG2452|consen  580 LSWKTAACLAAQV--------------LKFAE-----------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVG  634 (881)
T ss_pred             HHHHHHHHHHHHH--------------hhhhh-----------hcceEEEecCCcchhccccccCCccceeccccchHHH
Confidence            9999999987531              11222           2489999999875 5788887  99999999999999


Q ss_pred             HHHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      ++|++.|++ +.++|.+||||++|+||+.|+|+++|+..-+.+.|++-|.+|++..|+||..++.|+|+.++.+.+++++
T Consensus       635 ~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~  714 (881)
T KOG2452|consen  635 KHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMK  714 (881)
T ss_pred             HHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhc
Confidence            999999885 5899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|+|.+++-||--..++..++.++++.+++.||++.|||+++.    +.|.||+|||+.+++..|.++.||-|||||
T Consensus       715 ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~----r~g~~f~pti~s~i~d~~f~a~eesfgpim  789 (881)
T KOG2452|consen  715 VGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVP----RPGFFFEPTVFTDVEDHMFIAKEESFGPVM  789 (881)
T ss_pred             cCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCC----CCCcccCCeeecccchhhhhhhccccCceE
Confidence            999999999999998888999999999999999999999999863    679999999999999999999999999986

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-57  Score=502.11  Aligned_cols=334  Identities=19%  Similarity=0.189  Sum_probs=284.4

Q ss_pred             EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHH
Q 013608           79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL  158 (439)
Q Consensus        79 ~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~  158 (439)
                      .+...+.+|+++++++|++||+.|+++|.++|.++|+++++.+++++++|++++++|+||+..++...++..+.+.++++
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~   84 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS   84 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999887533444444444433


Q ss_pred             HHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608          159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII  238 (439)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~  238 (439)
                      .. .++....  .+.   ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus        85 ~~-~~~~~g~--~~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~  158 (862)
T PRK13805         85 YK-DEKTVGV--IEE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIV  158 (862)
T ss_pred             hc-CCCcccc--cCc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHH
Confidence            32 1111111  110   01234678899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHH
Q 013608          239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH  315 (439)
Q Consensus       239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~  315 (439)
                      +++|.++|+|+|+||++++. .+.++.|++  ++|+|+||||+.++    +.++++++|+++|+|||||+||++|||++.
T Consensus       159 ~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~  234 (862)
T PRK13805        159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKR  234 (862)
T ss_pred             HHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence            99999999999999999984 478888987  69999999999964    566778999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCC
Q 013608          316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA  395 (439)
Q Consensus       316 aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  395 (439)
                      |++.+++|+|+|+||.|++++|||||+++||+|+++|.++      |         +|+++++++++++++|+++++.|+
T Consensus       235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~  299 (862)
T PRK13805        235 AVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGAL  299 (862)
T ss_pred             HHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCc
Confidence            9999999999999999999999999999999999999887      2         589999999999999999877665


Q ss_pred             EE-EeCCCCCCCCCCCCCceeccEE------EecCCCCCcccccCccccCC
Q 013608          396 EI-LARGSFGHLSEGAVDQYFPPTV------IVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       396 ~~-l~gG~~~~~~~~~~g~~~~PTv------l~~v~~~~~i~~~E~FgPv~  439 (439)
                      +. ++||..... ....|.|++||+      +.+++++|++++ |.||||+
T Consensus       300 ~~~~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl  348 (862)
T PRK13805        300 NADIVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVL  348 (862)
T ss_pred             CccccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEE
Confidence            43 456642100 012488999997      678999999888 7999985

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=1.7e-56  Score=454.39  Aligned_cols=296  Identities=23%  Similarity=0.263  Sum_probs=251.9

Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhh-------hhHHHHHHHHHHHH
Q 013608           90 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV----DAS-------LGEIMTTCEKITWL  158 (439)
Q Consensus        90 ~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~----~a~-------~~Ei~~~~~~l~~~  158 (439)
                      ..+++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+..    ++.       +.|+..+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999999999877776643    332       25888899999988


Q ss_pred             HHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608          159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII  238 (439)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~  238 (439)
                      +...+. .. ...+..........+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++
T Consensus        82 a~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~  157 (406)
T cd07079          82 AALPDP-VG-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII  157 (406)
T ss_pred             HhcCCC-Cc-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence            876442 11 111110000112457899999999999996 56 678899999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCC-h-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHH
Q 013608          239 QAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP  314 (439)
Q Consensus       239 ~~~l~~aG~p~~~v~~v~~~-~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~  314 (439)
                      +++|.++|+|+|++|++++. . +.++.|++  .+|+|+||||+.+|++|++.+   ++|+++|||||||+||++|||++
T Consensus       158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~  234 (406)
T cd07079         158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE  234 (406)
T ss_pred             HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence            99999999999999999984 3 35666776  799999999999999999877   69999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCC
Q 013608          315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG  394 (439)
Q Consensus       315 ~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G  394 (439)
                      .|++.+++|+|.|+| .|++++|||||+++||+|+++|.+++++                                  .|
T Consensus       235 ~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~g  279 (406)
T cd07079         235 MAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AG  279 (406)
T ss_pred             HHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CC
Confidence            999999999999999 9999999999999999999999998776                                  26


Q ss_pred             CEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          395 AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       395 a~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++.|+..        ..|++||    +++||++++||+||||+
T Consensus       280 a~~~~g~~~--------~~~~~pt----v~~d~~i~~eE~FGPVl  312 (406)
T cd07079         280 VELRGDEET--------LAILPGA----KPATEEDWGTEYLDLIL  312 (406)
T ss_pred             CEEecCHHH--------HHhcccc----cCCCcchhhhhhhCcee
Confidence            776533321        1388899    78999999999999996

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=3.4e-56  Score=453.75  Aligned_cols=300  Identities=21%  Similarity=0.237  Sum_probs=255.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHHH
Q 013608           86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK  154 (439)
Q Consensus        86 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~~-------~Ei~~~~~~  154 (439)
                      +|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+.    .++..       .|+..+++.
T Consensus         4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~   83 (417)
T PRK00197          4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG   83 (417)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999999998887764    34422       588888899


Q ss_pred             HHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHH
Q 013608          155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY  234 (439)
Q Consensus       155 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l  234 (439)
                      +++++.+.... .. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.++
T Consensus        84 ~~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l  159 (417)
T PRK00197         84 LRQVAALPDPV-GE-VLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL  159 (417)
T ss_pred             HHHHhhcCCCc-cc-cccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence            99888765532 11 111100011234688999999999999986 4 67888999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCcEEEEeCC-hh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCC
Q 013608          235 FRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD  310 (439)
Q Consensus       235 ~~~~~~~l~~aG~p~~~v~~v~~~-~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~d  310 (439)
                      ++++.++|.++|+|+|++|+|++. .+ .+..|..  .+|+|+||||+.+|++|++.+   ++|+++|||||||+||++|
T Consensus       160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d  236 (417)
T PRK00197        160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES  236 (417)
T ss_pred             HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence            999999999999999999999963 34 5667774  899999999999999999875   6999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 013608          311 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA  390 (439)
Q Consensus       311 aDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a  390 (439)
                      ||+|.|++.+++|+|+|+| .|++++|+|||+++||+|+++|.+++++++.+                            
T Consensus       237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------  287 (417)
T PRK00197        237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------  287 (417)
T ss_pred             CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence            9999999999999999999 99999999999999999999999999988532                            


Q ss_pred             HHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          391 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       391 ~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                            ++ ||..      ..+ |+ |||+   +++|++++||+||||+
T Consensus       288 ------~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl  318 (417)
T PRK00197        288 ------LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLIL  318 (417)
T ss_pred             ------Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceE
Confidence                  22 2210      012 33 9998   5789999999999986

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.1e-55  Score=410.99  Aligned_cols=377  Identities=22%  Similarity=0.355  Sum_probs=347.0

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      +.+.|.+ +|..  ++..++.++|+++++|+.|..++.+|.+.+++.|++|++.|...|...|.++.+.+.+.|+..-+.
T Consensus        20 n~gvy~g-kw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~   96 (507)
T KOG2453|consen   20 NAGVYHG-KWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQN   96 (507)
T ss_pred             ccceeee-eecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHH
Confidence            3334433 7855  578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhh---cCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      |.+++++|+||-..+. .+|+..-++.++|.....+..   .-|+.+|+..+      .-.+.|+|+|++|+.+|||-.-
T Consensus        97 lg~lvslemgkilaeg-vgevqeyvdicdyavglsr~l~g~i~pserpghal------leqwnplg~vgvitafnfpcav  169 (507)
T KOG2453|consen   97 LGKLVSLEMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHAL------LEQWNPLGVVGVITAFNFPCAV  169 (507)
T ss_pred             HhhhhhhhhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhH------HHhcCCcceEEEEEeccCCcee
Confidence            9999999999999998 799999999999887654432   22444454432      2356899999999999999987


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      .-|.-.-|+.+||+|++||.+++|+++....+++.+.|.+.-+|++......|..+.++++..  +++.+.||||+++++
T Consensus       170 ygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgK  249 (507)
T KOG2453|consen  170 YGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGK  249 (507)
T ss_pred             eccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhh
Confidence            778888899999999999999999999999999999999999999999999999999999988  999999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .+.+..-.+..+..+||||+|+.||.+|||+..++...++++...+||+|+..+|+++|+++||+.+++|++..+++++|
T Consensus       250 svgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ig  329 (507)
T KOG2453|consen  250 SVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIG  329 (507)
T ss_pred             HHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecC
Confidence            99998888888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .|+|+++-+||+.++++..+++.-|++++++|.++++||+..    ..+|+|++|||++ ..+|.++..+|.|+||+
T Consensus       330 npld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapil  401 (507)
T KOG2453|consen  330 NPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPIL  401 (507)
T ss_pred             CcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhcccee
Confidence            999999999999999999999999999999999999999965    3679999999997 89999999999999986

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-54  Score=416.38  Aligned_cols=380  Identities=19%  Similarity=0.277  Sum_probs=327.2

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-H
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYII-E  123 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~-~  123 (439)
                      ....-+-|+|+-+..  .......+|.+ +..++++.-++.++|++||++|.+|++.|...|+.+|.+++++.+++|. +
T Consensus        57 ~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistk  134 (561)
T KOG2455|consen   57 PLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTK  134 (561)
T ss_pred             ceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcch
Confidence            344557778866554  33467778888 5679999999999999999999999999999999999999999999998 7


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeec-cEEEEEcCCCcch
Q 013608          124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPF  202 (439)
Q Consensus       124 ~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N~P~  202 (439)
                      ++-+|-...+.-.||+..+|..+-+..-++.+|+.++.+.....-+... .  .....+..+|+|+ |.|++|+||||-.
T Consensus       135 yr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~-~--~~~t~ns~~yRpleGFVaAisPFnftA  211 (561)
T KOG2455|consen  135 YRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPIS-Q--TKGTWNSMEYRPLEGFVAAISPFNFTA  211 (561)
T ss_pred             HHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCcc-c--cCCCCcceeeccccceeEEecccceee
Confidence            7888888889999999999854445566667777666665543221111 1  1335677899999 9999999999987


Q ss_pred             hhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChH
Q 013608          203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       203 ~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      ...--..+||| +||+|++|||..+.+++..+.+++++    ||+|+|++|+|++++ ..++.++.  .+.++.||||..
T Consensus       212 I~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~  286 (561)
T KOG2455|consen  212 IGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVP  286 (561)
T ss_pred             eccccccChhh-hcceeeecccchhHHHHHHHHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccH
Confidence            64444456666 59999999999999999988887776    999999999999987 56777776  999999999999


Q ss_pred             HHHHHHHHhhcc------CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHH
Q 013608          280 VGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA  353 (439)
Q Consensus       280 ~~~~v~~~aa~~------l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~  353 (439)
                      +-+++.+..+++      ..+++.|+||||..+|+++||++.++...+|++|.++||.|++.+|+||+++.++++.+.|.
T Consensus       287 ~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~  366 (561)
T KOG2455|consen  287 TFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELV  366 (561)
T ss_pred             HHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHH
Confidence            999998888765      46799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccc
Q 013608          354 KIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ  431 (439)
Q Consensus       354 ~~~~~l~~G~~-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~  431 (439)
                      +.-+++++|+| .|.++++||+|..++|+|++++|+.|++. ...+|+||+-    +...|+|+.|||+...+|+.+++.
T Consensus       367 ~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~  442 (561)
T KOG2455|consen  367 EEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMT  442 (561)
T ss_pred             HHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhh
Confidence            99999999997 68899999999999999999999999863 5789999994    357899999999999999999999


Q ss_pred             cCccccCC
Q 013608          432 EEIILWVS  439 (439)
Q Consensus       432 ~E~FgPv~  439 (439)
                      ||+||||+
T Consensus       443 ee~fGPvL  450 (561)
T KOG2455|consen  443 EEIFGPVL  450 (561)
T ss_pred             hhccCcee
Confidence            99999986

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=1.7e-53  Score=429.44  Aligned_cols=258  Identities=19%  Similarity=0.223  Sum_probs=226.7

Q ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhcCCCh--h----hhhhhHHHHHHHHHHHHHHhh
Q 013608           95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI------SSRDTGKTM--V----DASLGEIMTTCEKITWLLSEG  162 (439)
Q Consensus        95 A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~------~~~d~Gk~~--~----~a~~~Ei~~~~~~l~~~~~~~  162 (439)
                      |++||+.|+++|..+|.++|+++++.|++|+++|+++      +++|+||+.  .    ++ .+|+..+++.++|+++.+
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a-~~ev~~~~~~~~~~a~~a   79 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLT-EGRLKGIADGVKDVIELA   79 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCC-HHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999999      899999993  2    23 469999999999999887


Q ss_pred             hhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHH
Q 013608          163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL  242 (439)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l  242 (439)
                      ... . +..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++++++|
T Consensus        80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al  155 (398)
T TIGR00407        80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL  155 (398)
T ss_pred             CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence            542 2 1122100012335678999999999999997 7 6688899999999999999999999999999999999999


Q ss_pred             HhcCCCCCcEEEEeCC-hh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHH
Q 013608          243 AAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ  318 (439)
Q Consensus       243 ~~aG~p~~~v~~v~~~-~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~  318 (439)
                      .++|+|+|++|+|++. .+ .++.|.+  ++|+|+||||+.+++.+++..   .+|+++|+|||||+||++|||++.|++
T Consensus       156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~  232 (398)
T TIGR00407       156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIK  232 (398)
T ss_pred             HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHH
Confidence            9999999999999974 43 6777876  899999999999999988753   589999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       319 ~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      .+++|+|.+ ||.|++++|+|||+++||+|+++|.++++++++
T Consensus       233 ~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~  274 (398)
T TIGR00407       233 VIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV  274 (398)
T ss_pred             HHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            999999965 999999999999999999999999999998743

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=3.7e-53  Score=454.18  Aligned_cols=293  Identities=21%  Similarity=0.256  Sum_probs=250.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcC--CChhhhh---hhHHHHHHHH
Q 013608           86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEIS------SRDTG--KTMVDAS---LGEIMTTCEK  154 (439)
Q Consensus        86 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~------~~d~G--k~~~~a~---~~Ei~~~~~~  154 (439)
                      +++++++++|++||+.|+++|..+|.++|+++++.|+++.++|++++      ++|+|  |++.++.   .+|+..+++.
T Consensus       294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~  373 (718)
T PLN02418        294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS  373 (718)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence            35999999999999999999999999999999999999999999996      77999  8887764   4699999999


Q ss_pred             HHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHH
Q 013608          155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY  234 (439)
Q Consensus       155 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l  234 (439)
                      ++|++.. .+.... ..+......+...++.++|+|||++|+||| |+... +++++||++||+||+|||+.+|+++.++
T Consensus       374 ~~~~a~~-~~~~g~-~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l  449 (718)
T PLN02418        374 IRQLADM-EDPIGR-VLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL  449 (718)
T ss_pred             HHHHhcC-ccccCc-cccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence            9999987 333221 111000001223578899999999999999 99988 8999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCC----cEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec
Q 013608          235 FRIIQAALAAVGAPEN----LVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC  308 (439)
Q Consensus       235 ~~~~~~~l~~aG~p~~----~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~  308 (439)
                      ++++++    + +|+|    ++|+|++..+.++.|+.  .+++|+||||+.   .+++.++++++|+++|||||||+||+
T Consensus       450 ~~l~~e----A-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~  521 (718)
T PLN02418        450 HKVITD----A-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVD  521 (718)
T ss_pred             HHHHHH----H-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEe
Confidence            888876    5 6777    59999985567888887  999999999996   45666667799999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013608          309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN  388 (439)
Q Consensus       309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~  388 (439)
                      +|||++.|++.+++|+|.| ||.|++.+|+|||+++||+                        |         .+.++|+
T Consensus       522 ~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~  567 (718)
T PLN02418        522 KSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLV  567 (718)
T ss_pred             CCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHH
Confidence            9999999999999999999 9999999999999999997                        2         3589999


Q ss_pred             HHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       389 ~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+++||++ +||.+.      .|      ++ .+ ++|++++||+||||+
T Consensus       568 ~a~~~Ga~l-~Gg~~~------~g------~l-~~-~~~~i~~eE~FgPv~  603 (718)
T PLN02418        568 ALRSAGVTL-YGGPRA------SK------LL-NI-PEAQSFHHEYSSLAC  603 (718)
T ss_pred             HHHHCCCEE-ECCccc------cC------ee-CC-CCchhhhCCcCCeeE
Confidence            999999999 788632      24      23 34 889999999999985

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=1.1e-52  Score=426.61  Aligned_cols=287  Identities=15%  Similarity=0.168  Sum_probs=253.9

Q ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh----------hhHHHHHHHHHHHHHHhh
Q 013608           93 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS----------LGEIMTTCEKITWLLSEG  162 (439)
Q Consensus        93 ~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~----------~~Ei~~~~~~l~~~~~~~  162 (439)
                      ++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||++.+..          ..|+..+++.+++++...
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999999999999865432          138888999999888765


Q ss_pred             hhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHH
Q 013608          163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL  242 (439)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l  242 (439)
                      .+.... ..+.     ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++.++.+++++++
T Consensus        81 ~~~~~~-~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~  153 (397)
T cd07077          81 GHIQDV-LLPD-----NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD  153 (397)
T ss_pred             Ccccce-EecC-----CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence            543322 1111     1356889999999999999999999 99999999999999999999999999999999998864


Q ss_pred             HhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHH
Q 013608          243 AAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI  319 (439)
Q Consensus       243 ~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~  319 (439)
                       ++|+|++++|++++.+ +.+..|+.  ++|+|+||||+++++.+.+.+.  ++|+++|+||++++||++|+|++.|++.
T Consensus       154 -~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~  230 (397)
T cd07077         154 -AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGS  230 (397)
T ss_pred             -hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHH
Confidence             3689999999999754 67888887  7999999999999999998884  7999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEe
Q 013608          320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA  399 (439)
Q Consensus       320 i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~  399 (439)
                      +++++|.| ||.|+++++||||+++||+|+++|.++++.                                  +|++++.
T Consensus       231 ~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~  275 (397)
T cd07077         231 VHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQ  275 (397)
T ss_pred             HHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCC
Confidence            99999999 999999999999999999999999998875                                  6788887


Q ss_pred             CCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          400 RGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       400 gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ||.         +.|+.||      ++|++++||+||||+
T Consensus       276 g~~---------~~~~~pt------~~~~~~~~E~FgPvl  300 (397)
T cd07077         276 ETK---------PLSKETT------PSFDDEALESMTPLE  300 (397)
T ss_pred             Cce---------eeEEecc------CCCChhhhhhhCcee
Confidence            775         3578887      799999999999985

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=7.2e-49  Score=395.42  Aligned_cols=274  Identities=37%  Similarity=0.548  Sum_probs=251.4

Q ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCC
Q 013608           94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS  173 (439)
Q Consensus        94 ~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~  173 (439)
                      +|++|+..|++++.++|.++|+++++.|.+++++|+++++.|+||+..++ ..|+..+++.++++++..+++........
T Consensus         2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~   80 (367)
T cd06534           2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEA-LGEVARAIDTFRYAAGLADKLGGPELPSP   80 (367)
T ss_pred             hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            68999999999999999999999999999999999999999999999887 57999999999999988876654221111


Q ss_pred             CccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEE
Q 013608          174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD  253 (439)
Q Consensus       174 ~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~  253 (439)
                         ..+..++++++|+|||++|.|||+|+.+.++.+++||++||+||+|||+.+|+++..+.+++.+    +|+|+++++
T Consensus        81 ---~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~----ag~p~~~v~  153 (367)
T cd06534          81 ---DPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE----AGLPPGVVN  153 (367)
T ss_pred             ---CCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh----cCCCcCeEE
Confidence               1345678899999999999999999999999999999999999999999999999887776655    899999999


Q ss_pred             EEeCChh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCC
Q 013608          254 VITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ  330 (439)
Q Consensus       254 ~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ  330 (439)
                      +++++.+ .++.|+.  ++|.|.|+||.++++.|.+.++++++|+++|+||+|++||++|+|++.+++.+++++|.++||
T Consensus       154 ~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq  233 (367)
T cd06534         154 VVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ  233 (367)
T ss_pred             EEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            9999764 7788887  889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCC
Q 013608          331 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA  410 (439)
Q Consensus       331 ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~  410 (439)
                      .|+++++||||++++|+|+++|.                                                         
T Consensus       234 ~C~s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------  256 (367)
T cd06534         234 ICTAASRLLVHESIYDEFVEKLV---------------------------------------------------------  256 (367)
T ss_pred             CCCCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------
Confidence            99999999999999999999998                                                         


Q ss_pred             CCceeccEEEecCCCCCcccccCccccCC
Q 013608          411 VDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       411 ~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                             ||+.+++++++++++|+||||+
T Consensus       257 -------tl~~~~~~~~~~~~~E~fgPv~  278 (367)
T cd06534         257 -------TVLVDVDPDMPIAQEEIFGPVL  278 (367)
T ss_pred             -------eeeeCCCCCCccccCCccCceE
Confidence                   8888889999999999999985

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=2.3e-49  Score=425.76  Aligned_cols=294  Identities=19%  Similarity=0.207  Sum_probs=234.6

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh--------h-------HHHHH
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL--------G-------EIMTT  151 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~--------~-------Ei~~~  151 (439)
                      +++..+++|++||+.|+.+|.++|.++|+++++.|++|+++|+    .++||++.+++.        .       |+..+
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            4888899999999999999999999999999999999999997    477777765532        1       35556


Q ss_pred             HHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH
Q 013608          152 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG  231 (439)
Q Consensus       152 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~  231 (439)
                      ++.++++++. .+.. .+..+..........+++++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|+++
T Consensus       363 ~~~l~~~a~~-~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~  438 (715)
T TIGR01092       363 AISLRQLAAM-EDPI-GRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSN  438 (715)
T ss_pred             HHHHHHHhcC-CCcc-cccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHH
Confidence            6666666652 2211 01110000001123467899999999999999 9988 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC
Q 013608          232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD  309 (439)
Q Consensus       232 ~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~  309 (439)
                      ..++++++++| ..|.+++++|+|++..+.++.|..  .+|+|+||||+.+|+.|++.++   +|+++|+|||||+||++
T Consensus       439 ~~l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~  514 (715)
T TIGR01092       439 AILHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK  514 (715)
T ss_pred             HHHHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence            99999988752 333344589999864456677776  8999999999999999999875   99999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 013608          310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND  389 (439)
Q Consensus       310 daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~  389 (439)
                      |||++.|++.+..+.|.+ ||.|++++|||||+++||+                         |        .+.+++++
T Consensus       515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~  560 (715)
T TIGR01092       515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM  560 (715)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence            999999998888777766 9999999999999999984                         0        26788899


Q ss_pred             HHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       390 a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++||+++ ||.+.      .+ |+.     ..+++|++++||+||||+
T Consensus       561 ~~~~Ga~l~-Gg~~~------~~-~~~-----~~~~~~~i~~eE~FGPvl  597 (715)
T TIGR01092       561 LRTEGVTIH-GGPRF------AA-YLT-----FNISETKSFRTEYSSLAC  597 (715)
T ss_pred             HHHCCCEEE-CCcch------hh-eec-----cCCCCchhhhccccCceE
Confidence            999999984 88632      12 432     136799999999999985

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=1.2e-32  Score=280.93  Aligned_cols=178  Identities=19%  Similarity=0.283  Sum_probs=156.0

Q ss_pred             ccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCC----CcEEE
Q 013608          179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE----NLVDV  254 (439)
Q Consensus       179 ~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~----~~v~~  254 (439)
                      +...+++++|+||+++|.|||||+ ..++.++.||++||++|+|||+.+|.++.++.+++.+    + +|+    +.+++
T Consensus       103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~----~-~p~~~~~~~~~v  176 (422)
T cd07080         103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLAD----V-DPNHPLTDSISV  176 (422)
T ss_pred             CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHh----c-CCCCcccceEEE
Confidence            356688999999999999999999 7899999999999999999999999999998888776    5 576    88888


Q ss_pred             Ee--CCh-hhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec-CCC----CHHHHHHHHHHHHHh
Q 013608          255 IT--GFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC-DDV----DVPHVAQIAVRAALQ  326 (439)
Q Consensus       255 v~--~~~-~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~-~da----Dl~~aa~~i~~~~f~  326 (439)
                      +.  |.. +.++.|+..-|+|+||||+++++.|++.++++  +.++|+|||++.+|. +++    |++.+++.+++++|.
T Consensus       177 v~~~g~~~~~~~~l~~~~D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~  254 (422)
T cd07080         177 VYWPGGDAELEERILASADAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICR  254 (422)
T ss_pred             EEecCCchHHHHHHHHhCCEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHH
Confidence            84  544 47788888339999999999999999999865  679999999555555 458    999999999999999


Q ss_pred             ccCCCCCCCceeEEehhh---HHHHHHHHHHHHHhCccCCC
Q 013608          327 SSGQNCAGAERFYVHRDI---YALFVSQVAKIVKSVSAGPP  364 (439)
Q Consensus       327 ~~GQ~C~~~~~v~V~~~i---~d~f~~~L~~~~~~l~~G~~  364 (439)
                      ++||.|+++++||||+++   +++|.++|.++++++....|
T Consensus       255 ~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p  295 (422)
T cd07080         255 YDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP  295 (422)
T ss_pred             HhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999   99999999999998764433

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.95  E-value=1.4e-26  Score=223.86  Aligned_cols=262  Identities=23%  Similarity=0.301  Sum_probs=221.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC----ChhhhhhhHHHHHHHHHHHHHHh
Q 013608           86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK----TMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        86 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk----~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      .++.+..++|++|....+.++.++|.+.|.++++.|+.+.++|.++..+|.-.    .+.++....+.++-++++-+++-
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            45778889999999999999999999999999999999999999988887521    23344444455555555555544


Q ss_pred             hhhh----------cCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH
Q 013608          162 GEKW----------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG  231 (439)
Q Consensus       162 ~~~~----------l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~  231 (439)
                      .++.          .....++++     -..+-.+.|+||+++|.. .+| .........+|.+||+||+|.+..+..|+
T Consensus        83 l~~Va~L~DPvGev~~~~~~~nG-----L~i~~~rvPLGVigvIYE-sRP-nVtvdaaaLclKsGNAvILRGGsea~~Sn  155 (417)
T COG0014          83 LRQVAALPDPVGEVIDGWTLPNG-----LQIYRVRVPLGVIGVIYE-SRP-NVTVDAAALCLKSGNAVILRGGSEAIHSN  155 (417)
T ss_pred             HHHHhcCCCchHhhhccccCCCC-----CEEEEEEccceEEEEEEe-cCC-ccHHHHHHHHHhcCCEEEEeCcHHHhhhH
Confidence            3332          222233333     345668899999999988 677 34567778899999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh---CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEe
Q 013608          232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV  307 (439)
Q Consensus       232 ~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~---~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV  307 (439)
                      ..++++++++|.++|+|++.||+++.. ++....|++   .+|.|+..||....+.|.+.+.   .||+-.+-|++.++|
T Consensus       156 ~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyv  232 (417)
T COG0014         156 AAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYV  232 (417)
T ss_pred             HHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEe
Confidence            999999999999999999999999974 466667766   8999999999999999999886   999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608          308 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS  358 (439)
Q Consensus       308 ~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~  358 (439)
                      +++||+|.|.+.+++++.+..+ .|++.+.++||+.+.++|+..|.+.+..
T Consensus       233 d~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~  282 (417)
T COG0014         233 DESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE  282 (417)
T ss_pred             cccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh
Confidence            9999999999999999999999 9999999999999999999999998874

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.84  E-value=8.9e-20  Score=171.05  Aligned_cols=255  Identities=23%  Similarity=0.321  Sum_probs=196.0

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------cCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d------~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      +++..+.|+++.+..+.++.++|.++|.++++.|..+..+|..+...|      +|.  .+..+..+..+-.+++.+..-
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL--~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGL--AESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCc--cHHHHHHhcCChHHHHHHHHH
Confidence            456778999999999999999999999999999998888777665544      442  222222333333344433322


Q ss_pred             hh----------hhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHH
Q 013608          162 GE----------KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG  231 (439)
Q Consensus       162 ~~----------~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~  231 (439)
                      ..          +.++......+     -.-+..-.|+||.++|.. ..| -.+..-...|+++||++++|....+..|.
T Consensus        80 ~~~ia~~edpvGRVl~~~~ladg-----L~L~qvt~PiGvLLVIFE-SRP-d~l~qiasLAi~SgN~llLKGGkEa~~Sn  152 (433)
T KOG4165|consen   80 LRQIAELEDPVGRVLKKTRLADG-----LELEQVTVPIGVLLVIFE-SRP-DCLPQIASLAIASGNGLLLKGGKEAAHSN  152 (433)
T ss_pred             HHHHHhcccchhhheeeeeccCC-----ceEEEeeccceEEEEEec-cCc-hHHHHHHHHHHhcCCeEeecCchhhhhhH
Confidence            21          12222222222     223445589999999976 556 23444456699999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC
Q 013608          232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD  309 (439)
Q Consensus       232 ~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~  309 (439)
                      ..+.++++++|.+.|.|.+.||+|+...+..+.|-.  .||.|+..||+...+.|.+..-   .||.-+-.|-+.++|++
T Consensus       153 ~~L~~~v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~  229 (433)
T KOG4165|consen  153 AALHKLVQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDK  229 (433)
T ss_pred             HHHHHHHHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecc
Confidence            999999999999999999999999975444444432  8999999999999999887664   99999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceeEEehh-----hHHHHHHHHHHH
Q 013608          310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-----IYALFVSQVAKI  355 (439)
Q Consensus       310 daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-----i~d~f~~~L~~~  355 (439)
                      |||++.|.+.+..+++.+.. .|++++.+++|++     .+++++.+|.+.
T Consensus       230 dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~~  279 (433)
T KOG4165|consen  230 DADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKEE  279 (433)
T ss_pred             ccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHhc
Confidence            99999999999999999987 9999999999996     456666666553

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.61  E-value=3.8e-13  Score=136.14  Aligned_cols=175  Identities=18%  Similarity=0.205  Sum_probs=138.3

Q ss_pred             eeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEe--CCh
Q 013608          182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GFA  259 (439)
Q Consensus       182 ~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~--~~~  259 (439)
                      .+.++.|+|++++|.|.|-|+. .+..++.+|.+||..|+|+|+..+..+..+.+.+.++..+.-+ .+.+.++.  +..
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d  158 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD  158 (399)
T ss_pred             chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence            5678899999999999999975 5555888999999999999999999999988888764221111 24466663  322


Q ss_pred             -hhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCcee
Q 013608          260 -ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF  338 (439)
Q Consensus       260 -~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v  338 (439)
                       +..+.+.+..|.++.+||.++.+.+.+.+. ..++.+....-.+.++|..+++++.+++.+.+-.+...+|.|.|++.|
T Consensus       159 ~~~~~~~~~~~D~vv~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i  237 (399)
T PF05893_consen  159 EELEEALSQQADAVVAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI  237 (399)
T ss_pred             hHHHHHHHHHCCEEEEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence             445556669999999999999999999443 335555555566667777778999999999999999999999999999


Q ss_pred             EEe---hhhHHHHHHHHHHHHHhC
Q 013608          339 YVH---RDIYALFVSQVAKIVKSV  359 (439)
Q Consensus       339 ~V~---~~i~d~f~~~L~~~~~~l  359 (439)
                      ||.   +.-.++|.++|.+++++.
T Consensus       238 fv~~g~~~~~~~f~~~L~~~L~~~  261 (399)
T PF05893_consen  238 FVETGDGDSVEEFAERLAEALERA  261 (399)
T ss_pred             EEECCCcccHHHHHHHHHHHHHHH
Confidence            999   345678888887777654

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.50  E-value=5.7e-07  Score=102.37  Aligned_cols=103  Identities=14%  Similarity=0.200  Sum_probs=82.4

Q ss_pred             cccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeC
Q 013608          178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG  257 (439)
Q Consensus       178 ~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~  257 (439)
                      ++++|..+..|+|++++++|||   ..++.++.+||++||+||+||+++++.       .+      +.+|..+.+.+..
T Consensus      1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~------~~Lp~~~~~~~~~ 1131 (1208)
T PRK11905       1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL------ADLPGLVAARIDW 1131 (1208)
T ss_pred             CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH------HhCcccccccccc
Confidence            6799999999999999999999   458899999999999999999998651       11      3467666655522


Q ss_pred             ChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CCceEEEcC
Q 013608          258 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELG  300 (439)
Q Consensus       258 ~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~pv~lelg  300 (439)
                          +..+..  .++.|.|+||+++++.+.+..+++   +.|++.|..
T Consensus      1132 ----~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905       1132 ----TQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred             ----ccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence                234555  799999999999999999988876   466776664

>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]

Probab=98.44  E-value=1.9e-07  Score=77.96  Aligned_cols=83  Identities=19%  Similarity=0.181  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCC
Q 013608          345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN  424 (439)
Q Consensus       345 ~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~  424 (439)
                      .....+.|.++.+.|++-+...+.+|.     .+...|+.++|+.      .+..-|...-.|.+.+|+|..||+|. |+
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiLs-vt   75 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTILS-VT   75 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEEE-ec
Confidence            456778888999999988877778887     6677888888875      24444443334668899999999998 99


Q ss_pred             CCCcccccCccccCC
Q 013608          425 HTMKLMQEEIILWVS  439 (439)
Q Consensus       425 ~~~~i~~~E~FgPv~  439 (439)
                      |+|.++.||+||||+
T Consensus        76 P~ms~ykeeI~gpVl   90 (157)
T KOG2449|consen   76 PNMSCYKEEIFGPVL   90 (157)
T ss_pred             CCcceeHhhhhcceE
Confidence            999999999999985

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=97.59  E-value=0.00034  Score=64.00  Aligned_cols=102  Identities=13%  Similarity=0.139  Sum_probs=73.5

Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      .-+||++|.|++.|+..++++.-.--|  ..+.-.|+|||++.|+|+++++.+++.+.-      .     +.+...+.|
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~~------~-----va~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLSP------Q-----VANHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCCh------h-----hccCcHHHH
Confidence            458999999999999999998876655  457889999999999999999999887631      1     223344444


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT  426 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~  426 (439)
                      -.+.+   ...+++.+.++....      -.--.|.|+.|++++
T Consensus        73 sl~~i---~~l~~~~I~~~~~~~------~~~aSPilV~d~~h~  107 (215)
T PF07368_consen   73 SLKKI---KCLNAKTIVADFENV------PPPASPILVCDFTHS  107 (215)
T ss_pred             HHHHH---HhcCCeEEEecccCC------CCCCCCEEEcCCCHH
Confidence            44444   457999999955321      112357887776653

The function of this family is unknown.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=96.35  E-value=0.024  Score=65.53  Aligned_cols=101  Identities=12%  Similarity=0.166  Sum_probs=74.5

Q ss_pred             cccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeC
Q 013608          178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG  257 (439)
Q Consensus       178 ~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~  257 (439)
                      ++++|.....|+|+|+++.+ +-.  ..+.++.++|++||.+|+..++.   ...    ++      .++|+.+.+.+..
T Consensus      1177 TGE~N~l~l~pRg~vLcl~~-~~~--~~~~Ql~Aala~Gn~~v~~~~~~---~~~----~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809       1177 TGERNTYTLLPRERVLCLAD-TEQ--DALTQLAAVLAVGSQALWPDDAL---HRA----LV------AALPAAVQARIQL 1240 (1318)
T ss_pred             CCCcceeeccCCCcEEEeCC-CHH--HHHHHHHHHHHhCCEEEEeCCch---hHH----HH------HhccHHHHhHhhh
Confidence            57899999999999999987 333  68899999999999988865442   111    11      4688888776532


Q ss_pred             ChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceE
Q 013608          258 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVT  296 (439)
Q Consensus       258 ~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~  296 (439)
                      .  ....+.. .++.|.|.|..+..+.+.++.+++--|++
T Consensus      1241 ~--~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809       1241 A--KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred             c--cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence            1  1122222 79999999999999999998887754443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	439
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-40
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		4e-38
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		4e-38
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-37
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		4e-37
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		5e-37
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		5e-37
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		2e-36
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		2e-36
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-35
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		1e-35
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		1e-35
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-35
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		7e-35
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		8e-35
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-34
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		1e-34
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		2e-34
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-34
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		6e-34
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		2e-33
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-33
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		3e-33
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-32
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-32
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		8e-32
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		2e-31
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		1e-30
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		1e-30
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		3e-30
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-30
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		5e-30
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-29
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		2e-29
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		2e-29
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		2e-29
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-29
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		3e-29
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		3e-29
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		3e-29
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		3e-29
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		3e-29
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		3e-29
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		1e-28
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		2e-28
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-28
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		3e-28
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		5e-28
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		5e-28
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		6e-28
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		2e-27
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		2e-27
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		9e-27
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		3e-26
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		7e-26
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		2e-25
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		3e-25
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		4e-25
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		9e-25
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		1e-24
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		1e-24
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		5e-24
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		1e-23
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		5e-23
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		5e-23
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		5e-22
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		7e-22
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-21
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-20
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		4e-20
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		7e-19
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		7e-19
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		8e-19
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		3e-17
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-15
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		3e-15
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		9e-15
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		4e-14
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		5e-14
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		4e-13
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-10
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		1e-06
3v4c_A	528	Crystal Structure Of A Semialdehyde Dehydrogenase F		9e-05
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-04
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		5e-04
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		8e-04

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 14/390 (3%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
           ++I    R P  + ++    P+T + +G  PA +  +V+  V  AR+A  +  W+ +S  
Sbjct: 10  LFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGA 69
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
            R  +LR +   I E ++   ++ + D+GK   +A L +I        +   + E     
Sbjct: 70  HRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGK 128
Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 228
           +       M   K+ V   PLGVVG I  WNYP       +  A+ +G   V+K SE AS
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 229 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285
            + C  F  +      VG P  +++++TG   + G  LVS   VDKI F GS   G  +M
Sbjct: 189 VT-CLEFGEV---CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
            +A++ + PVTLELGGK   +V +DVD+  V +  +     ++GQ C+   R  VH  I 
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIA 304
Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-G 404
           A FV ++ K  K++    P      +G +      +K+   ++ A  +GA IL  GS   
Sbjct: 305 AEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPE 364
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           HL +G    Y  PT++ +++ +M++ +EE+
Sbjct: 365 HLKKG---YYIEPTIVTDISTSMQIWKEEV 391

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 23/389 (5%)
Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           YI    +   S+   + ++PAT + LG  P +  AE    +  A+ A   W   + K+R 
Sbjct: 16  YIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA 75
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYR 171
             LR     +I + + +  I + + GK + +A  GEI      I W   EG+       R
Sbjct: 76  AILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGK-------R 127
Query: 172 SSGRSM----IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
            +G ++     +K+  V   P+GV  AI  WN+P   I   +  A+ +G  IV+K +E+ 
Sbjct: 128 VAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAEST 187
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMI 284
            +S      + + A    G P+ ++ V+ G  +  G  + S+  V K+ F GS  VGR++
Sbjct: 188 PFSALAMAFLAERA----GVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
           M  ++ T+  +TLELGG   FIV DD D+    + A+ +  +++GQ C    RF+VH  +
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERV 303
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
           Y  F  ++A  V  +  G        +G L      +K+++ + DAL KGA ++  G   
Sbjct: 304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
            L  G    +F PTV+  V   M + +EE
Sbjct: 364 ALGHG----FFEPTVLTGVKPDMDVAKEE 388

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 201/408 (49%), Gaps = 28/408 (6%)
Query: 44  QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
           Q P N  + IP R        R P  + ++    PAT + +G  PA +  +VD  V  AR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 97  KA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCE 153
           KA  +  W  ++  QR ++LR +   ++E + ++  + S D+GKT+ +++   + +  C 
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCF 131
Query: 154 KITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211
           +    L+E    + + P   +S       K+ V   PLGVVG I  WNYP       +  
Sbjct: 132 EYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGVVGLITPWNYPLLMAIWKVAP 187
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS-- 268
           A+ +G   ++K SE AS + C     I      +G P   ++++TG   E G  L S   
Sbjct: 188 ALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGALNILTGLGPEAGGPLASHPH 243
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-AQIAVRAALQS 327
           VDKI F GS   G  IM  A++ + PV+LELGGK   +V DD+D   + A+  +     +
Sbjct: 244 VDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFAN 303
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           +GQ C+   R  V  +I + F+ ++ K  K++    PL     +G +      EK+   +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 388 NDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++A  +GA IL  G    HL +G    Y  PT+I +VN +M++ +EE+
Sbjct: 364 SNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTSMEIWKEEV 408

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 200/408 (49%), Gaps = 28/408 (6%)
Query: 44  QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
           Q P N  + IP R        R P  + ++    PAT + +G  PA +  +VD  V  AR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 97  KA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG-EIMTTCE 153
           KA  +  W  ++  QR ++LR +   ++E + ++  + S D+GKT+ +++   + +  C 
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCF 131
Query: 154 KITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA 211
           +    L+E    + + P   +S       K+ V   PLGVVG I  WNYP       +  
Sbjct: 132 EYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGVVGLITPWNYPLLMAIWKVAP 187
Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS-- 268
           A+ +G   ++K SE AS + C     I      +G P   ++++TG   E G  L S   
Sbjct: 188 ALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGALNILTGLGPEAGGPLASHPH 243
Query: 269 VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV-AQIAVRAALQS 327
           VDKI F GS   G  IM  A++ + PV+L LGGK   +V DD+D   + A+  +     +
Sbjct: 244 VDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFAN 303
Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           +GQ C+   R  V  +I + F+ ++ K  K++    PL     +G +      EK+   +
Sbjct: 304 TGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFI 363
Query: 388 NDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++A  +GA IL  G    HL +G    Y  PT+I +VN +M++ +EE+
Sbjct: 364 SNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTSMEIWKEEV 408

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 188/393 (47%), Gaps = 17/393 (4%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV-----WAKS 105
           ++I    + P    ++    PAT   +G  PA ++ +VD  VA A+ A        WA +
Sbjct: 10  LFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
           S   R ++LR +   + E +  + ++ S D GK + D +  +I        +     EK 
Sbjct: 70  SGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPL-DEAAWDIDDVAGCFEYYADLAEKL 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              +       M   K+ V   P+GVVG I  WNYP       +  A+ +G   ++K SE
Sbjct: 129 DARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282
            AS + C     I      VG P  +++++TG   E G  L +   VDK+ F GS   G 
Sbjct: 189 LASLT-CLELGEI---CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
            IM  A++ + PV+LELGGK   +V +DVD+   A+ A+     ++GQ C+   R  +H 
Sbjct: 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHE 304
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
            I   F++++ K +K++    PL     +G +      EK+   V++A  +GA IL  GS
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS 364
Query: 403 FG-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              HL +G    +  PT+I +V   M++ +EE+
Sbjct: 365 RPEHLKKGF---FIEPTIITDVTTNMQIWREEV 394

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 21/374 (5%)
Query: 66  VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
           +    PA    LG  P +   E    +  A +A   W   + K+R   LR     ++EHQ
Sbjct: 27  IDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQ 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKA 182
           + +  + + + GK + +A  GEI      I W   EG++      P +++  R ++ K+ 
Sbjct: 87  DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ- 144
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
                P+GV  AI  WN+P   I      A+ +G  +V+K +    +S      + + A+
Sbjct: 145 -----PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAI 196
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
            A G P  + +V+TG A   G  L S+  V K+ F GS  +GR +M   +K +  V+LEL
Sbjct: 197 RA-GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+    + A+ +  +++GQ C  A R YV   +Y  F  ++ + +  +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G  L     +G L   +   K++  + DAL+KGA ++  G   H   G    +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTI 371
Query: 420 IVNVNHTMKLMQEE 433
           +V+V    K+ +EE
Sbjct: 372 LVDVPANAKVSKEE 385

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 178/374 (47%), Gaps = 21/374 (5%)
Query: 66  VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
           +    PA    LG  P +   E    +  A +A   W   + K+R   LR     ++EHQ
Sbjct: 27  IDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQ 86
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKA 182
           + +  + + + GK + +A  GEI      I W   EG++      P +++  R ++ K+ 
Sbjct: 87  DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ- 144
Query: 183 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
                P+GV  AI  WN+P   I      A+ +G  +V+K +    +S      + + A+
Sbjct: 145 -----PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAI 196
Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
            A G P  + +V+TG A   G  L S+  V K+ F GS  +GR +M   +K +  V+LEL
Sbjct: 197 RA-GVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+    + A+ +  +++GQ C  A R YV   +Y  F  ++ + +  +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315
Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G  L     +G L   +   K++  + DAL+KGA ++  G   H   G    +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTI 371
Query: 420 IVNVNHTMKLMQEE 433
           +V+V    K+ +EE
Sbjct: 372 LVDVPANAKVSKEE 385

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 21/395 (5%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERV-----AQARKAQKVWAKS 105
           ++I    R P    ++    P+T   +G  PA ++ +VD  V     A +RK  + W+ +
Sbjct: 10  LFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAA 69
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGE 163
           S   R ++LR +   I E ++ + ++ S D GK + +A   L +++   E    L  E +
Sbjct: 70  SGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELD 129
Query: 164 KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223
              K         M   K+ +   P+GVV  I  WNYPF      +  A+ +G   ++K 
Sbjct: 130 SKQKAPI---SLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKP 186
Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280
           SE AS + C     I      VG P  +++++TG   E G +L S   VDKI F GS   
Sbjct: 187 SELASVT-CLELGEI---CKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSAT 242
Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
           G  IM  A++ + PV+LELGGK   +V +DVD+  VA+  V     ++GQ C+   R  V
Sbjct: 243 GSKIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIV 302
Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
           H  I   FV ++ K  +++    PL     +G +      +K+ N ++ A  +GA IL  
Sbjct: 303 HESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTG 362
Query: 401 GSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G    HL +G    +  PT+I +V  +M++ +EE+
Sbjct: 363 GRRPEHLKKG---YFVEPTIITDVTTSMQIWREEV 394

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 20/391 (5%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFK 108
           ++I  +   P +   ++   PAT +Y+G  P  + A+VD  VA AR A     W  +   
Sbjct: 11  LFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPH 70
Query: 109 QRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WL 166
           +R   +   +K + E ++L  ++ + +TG+          M +   + +     +K  W 
Sbjct: 71  ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT 130
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
           +    S G+S++ ++      P+GVVGAIV+WN P     N +  A+ +G  IV+K +  
Sbjct: 131 ETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 284
              +       +    A VG PE ++ V+ G  ETG+AL S+  +D   F GS  VGR +
Sbjct: 185 TPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV 240
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
            R A++ L P TLELGGK A I+ +DVD+     + V + + ++GQ C    R    R  
Sbjct: 241 GRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSR 300
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
           Y   V+ V   V ++  GPP      +G L   +   +++  +   +++GA ++  G   
Sbjct: 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG-- 358
Query: 405 HLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
              EG  + +F  PTV  +V++ M + QEEI
Sbjct: 359 -RPEGLDNGFFIQPTVFADVDNKMTIAQEEI 388

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 26/395 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  R     S    +   PA  + L      SR +V+  V  A + QKVWA  +  QR
Sbjct: 9   LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
            + LR  +  + E  + +  + + DTGK + +    +I+T  + + +        EGE+ 
Sbjct: 69  SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              E      S ++ + +    PLGVV  I +WNYP          A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
               +      I   A    G P+ + +V+TG   E G+ L     ++KI F G    G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
            +M +AS + L  VT+ELGGK   I+  D D+   A IAV A   SSGQ C    R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           R   A F ++V + V+ +  G P     + G L    H E +   +     + A +L  G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
               +++GA  +  Y  PTV  +    M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 26/395 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  R     S    +   PA  + L      SR +V+  V  A + QKVWA  +  QR
Sbjct: 8   LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 67
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
            + LR  +  + E  + +  + + DTGK + +    +I+T  + + +        EGE+ 
Sbjct: 68  SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 127
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              E      S ++ + +    PLGVV  I +WNYP          A+ +GN ++ K SE
Sbjct: 128 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
               +      I   A    G P+ + +V+TG   E G+ L     ++KI F G    G+
Sbjct: 179 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 234
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
            +M +AS + L  VT+ELGGK   I+  D D+   A IAV A   SSGQ C    R ++H
Sbjct: 235 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 294
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           R   A F ++V + V+ +  G P     + G L    H E +   +     + A +L  G
Sbjct: 295 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 354
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
               +++GA  +  Y  PTV  +    M +++EEI
Sbjct: 355 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 387

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  +   +
Sbjct: 16  SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
           +  +E I  I S++  K    A + E++ T E I +   EG + ++ E    G      K
Sbjct: 76  MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
            K   V   P+G+V AI  +NYP +   + +  A+ +GN I  K     S SG     ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
             A A  G P  + + ITG  +E G+ +V   +V+ I F GS G+G  I + A   + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGGKD+ IV +D D+   A+  +  A   SGQ C   +R  V   +    V ++ + 
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
           V +++ G P     D+  L   + ++ ++ L+NDA DKGA  L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  +   +
Sbjct: 16  SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
           +  +E I  I S++  K    A + E++ T E I +   EG + ++ E    G      K
Sbjct: 76  MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
            K   V   P+G+V AI  +NYP +   + +  A+ +GN I  K     S SG     ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
             A A  G P  + + ITG  +E G+ +V   +V+ I F GS G+G  I + A   + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGGKD+ IV +D D+   A+  +  A   SGQ C   +R  V   +    V ++ + 
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
           V +++ G P     D+  L   + ++ ++ L+NDA DKGA  L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  R     S    +   PA  + L      SR +V+  V  A + QKVWA  +  QR
Sbjct: 8   LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 67
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
            + LR  +  + E  + +  + + DTGK + +    +I+T  + + +        EGE+ 
Sbjct: 68  SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 127
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              E      S ++ + +    PLGVV  I +WNYP          A+ +GN ++ K SE
Sbjct: 128 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 178
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
               +      I   A    G P+ + +V+TG   E G+ L     ++KI F G    G+
Sbjct: 179 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 234
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
            +M +AS + L  VT+ LGGK   I+  D D+   A IAV A   SSGQ C    R ++H
Sbjct: 235 KVMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH 294
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           R   A F ++V + V+ +  G P     + G L    H E +   +     + A +L  G
Sbjct: 295 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 354
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
               +++GA  +  Y  PTV  +    M +++EEI
Sbjct: 355 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 387

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  144 bits (364), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  +   +
Sbjct: 16  SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
           +  +E I  I S++  K    +++ E++ T E I +   EG + ++ E    G      K
Sbjct: 76  MRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
            K   V   P+G+V AI  +NYP +   + +  A+ +GN I  K     S SG     ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
             A A  G P  + + ITG  +E G+ +V   +V+ I F GS G+G  I + A   + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            L LGGKD+ IV +D D+   A+  +  A   SGQ C   +R  V   +    V ++ + 
Sbjct: 248 MLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
           V +++ G P     D+  L   + ++ ++ L+NDA DKGA  L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  R     S    +   PA  + L      SR +V+  V  A + QKVWA  +  QR
Sbjct: 9   LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
            + LR  +  + E  + +  + + DTGK + +    +I+T  + + +        EGE+ 
Sbjct: 69  SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              E      S ++ + +    PLGVV  I +WNYP          A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
               +      I   A    G P+ + +V+TG   E G+ L     ++KI F G    G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
            +M +AS + L  VT+ELGGK   I+  D D+   A IAV A   SSGQ      R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           R   A F ++V + V+ +  G P     + G L    H E +   +     + A +L  G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
               +++GA  +  Y  PTV  +    M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 183/376 (48%), Gaps = 24/376 (6%)
Query: 65  KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
           ++    PA+   LG  PALS+ EV++ +  A+ AQK+W      +R   L      + E 
Sbjct: 28  RISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEER 87
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW----LKPEYRSSGRSMIHK 180
           +E+I E+   +  K    A +GE+  T + I     E  +     LK +    G S   K
Sbjct: 88  KEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSS--KK 144
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
            A VE  PLGVV AI  +NYP +     +  A+ +GN +V K +   S SG    ++++A
Sbjct: 145 IALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG---IKMVEA 201
Query: 241 ALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
            LA  GAPE ++ V+TG     G+ LV    +D I F G    G  I   A   + PV L
Sbjct: 202 -LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVL 258
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGGKD  IV DD D+   A   V  A   SGQ C   +R +V   +    V+ + ++V+
Sbjct: 259 ELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVE 318
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 417
            ++ G P     D+  +   + +  +Q L++DAL+ GA +L+    G+  +G       P
Sbjct: 319 QLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLS----GNKRQG---NLLSP 370
Query: 418 TVIVNVNHTMKLMQEE 433
           T++ +V   M++  EE
Sbjct: 371 TLLDDVTPAMRVAWEE 386

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 172/343 (50%), Gaps = 15/343 (4%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  +   +
Sbjct: 16  SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
           +  +E I  I S++  K    A + E++ T E I +   EG + ++ E    G      K
Sbjct: 76  MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASK 133
Query: 182 AK---VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
            K   V   P+G+V AI  +NYP +   + +  A+ +GN I  K     S SG     ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 295
             A A  G P  + + ITG  +E G+ +V   +V+ I F GS G+G  I + A   + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGGKD+ IV +D D+   A+  +  A   SGQ     +R  V   +    V ++ + 
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREK 307
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
           V +++ G P     D+  L   + ++ ++ L+NDA DKGA  L
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 26/395 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  R     S    +   PA  + L      SR +V+  V  A + QKVWA  +  QR
Sbjct: 9   LYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQR 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLS-----EGEKW 165
            + LR  +  + E  + +  + + DTGK + +    +I+T  + + +        EGE+ 
Sbjct: 69  SRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI 128
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
              E      S ++ + +    PLGVV  I +WNYP          A+ +GN ++ K SE
Sbjct: 129 PLRET-----SFVYTRRE----PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGR 282
               +      I   A    G P+ + +V+TG   E G+ L     ++KI F G    G+
Sbjct: 180 VTPLTALKLAEIYTEA----GVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235
Query: 283 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 341
            +M +AS + L  VT+ELGGK   I+  D D+   A IAV A   SSGQ      R ++H
Sbjct: 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIH 295
Query: 342 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           R   A F ++V + V+ +  G P     + G L    H E +   +     + A +L  G
Sbjct: 296 RSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGG 355
Query: 402 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEI 434
               +++GA  +  Y  PTV  +    M +++EEI
Sbjct: 356 E--RVTDGAFGKGAYVAPTVFTDCRDDMTIVREEI 388

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  141 bits (356), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 174/383 (45%), Gaps = 13/383 (3%)
Query: 56  RGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           R ++    T    +EPAT + L         EVD+ V  A+ A   W+K +  +R + + 
Sbjct: 28  RIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVML 87
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
              + I E ++ I ++   + GKT+ +A   +I    + I +             +  G 
Sbjct: 88  EAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGG 146
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
           +  + + +    PLGV   I++WNYPF         A+  GN +V K S     +G    
Sbjct: 147 AFAYTRRE----PLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293
            I   A    G P  LV+V+ G AETG  L    +V K+ F GS   G+ +M  ++KT+ 
Sbjct: 203 EIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
            VTLELGGK   ++  D ++ +  + A+ A   + GQ C    R +V R+I   F+ +V 
Sbjct: 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
           K  K++  G PL  +  MG L      +K+   V  A  +GA +L  G     S+  +  
Sbjct: 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKN 378
Query: 414 --YFPPTVIVNVNHTMKLMQEEI 434
             +  P V+ N    M  ++EEI
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEI 401

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 184/393 (46%), Gaps = 17/393 (4%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQA-----RKAQKVWAKS 105
           +++    R P    ++    P T  ++G  PA +  +VD  VA A     R   + WA++
Sbjct: 27  LFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWARA 86
Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW 165
               R ++LR +   +IE +  + ++ + D GK   +A+  ++        +   + E  
Sbjct: 87  PGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCFEYFADQAEAL 145
Query: 166 LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 225
            K +       M   K  +   P+GVVG I  WNYP       +  A+ +G   V+K SE
Sbjct: 146 DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSE 205
Query: 226 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGR 282
            AS + C     I      VG P  +++++TG      A +S+   VDK+ F GS   G+
Sbjct: 206 LASVT-CLELADI---CKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGK 261
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
            IM +A+  + PVTLELGGK   +V DDVD+    +  +     ++GQ C+   R  +H 
Sbjct: 262 KIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHT 321
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG- 401
            I   F  ++    K++    PL     +G +      EK++  +++A  +GA IL  G 
Sbjct: 322 KIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGV 381
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              HL +G    +  PT+I ++  +M++ +EE+
Sbjct: 382 RPAHLEKGF---FIEPTIITDITTSMEIWREEV 411

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 26/392 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  +  T + +  +    PAT   +   P     +  + +  A +AQ  W      +R
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
             +LR +   I E    I  +   + GK    A + E+  T + I ++ +E  +  + E 
Sbjct: 69  ASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
             S R     ++ K+A      LGV   I+ WN+PF  I   M  A+ +GN IVIK SE 
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
              +   + +I+      +G P  + +++ G  ET G+ L  +  V  +   GS   G  
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           IM  A+K +T V LELGGK   IV DD D+    +  V + + +SGQ C  AER YV + 
Sbjct: 237 IMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           IY  FV+++ + +++V  G P A + D  MG L      E+++  V  A+++GA +    
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           +FG  +      Y+PPT++++V   M +M EE
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  139 bits (351), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 26/392 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  +  T + +  +    PAT   +   P     +  + +  A +AQ  W      +R
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
             +LR +   I E    I  +   + GK    A + E+  T + I ++ +E  +  + E 
Sbjct: 69  ASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
             S R     ++ K+A      LGV   I+ WN+PF  I   M  A+ +GN IVIK SE 
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
              +   + +I+      +G P  + +++ G  ET G+ L  +  V  +   GS   G  
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           IM  A+K +T V LELGGK   IV DD D+    +  V + + +SGQ C  AER YV + 
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           IY  FV+++ + +++V  G P A + D  MG L      E+++  V  A+++GA +    
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           +FG  +      Y+PPT++++V   M +M EE
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 187/392 (47%), Gaps = 26/392 (6%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           +YI  +  T + +  +    PAT   +   P     +  + +  A +AQ  W      +R
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
             +LR +   I E    I  +   + GK    A + E+  T + I ++ +E  +  + E 
Sbjct: 69  ASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADYIDYM-AEWARRYEGEI 126
Query: 171 RSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
             S R     ++ K+A      LGV   I+ WN+PF  I   M  A+ +GN IVIK SE 
Sbjct: 127 IQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF 180
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
              +   + +I+      +G P  + +++ G  ET G+ L  +  V  +   GS   G  
Sbjct: 181 TPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEK 236
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           IM  A+K +T V LELGGK   IV DD D+    +  V + + +SGQ C  AER YV + 
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           IY  FV+++ + +++V  G P A + D  MG L      E+++  V  A+++GA +    
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           + G  +      Y+PPT++++V   M +M EE
Sbjct: 352 ALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEE 383

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 166/368 (45%), Gaps = 15/368 (4%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + +    A + A V+  +A A++AQK WA  S   R + L+     + E  + +  
Sbjct: 37  PATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALST 96
Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + + DTGK + +  + +  +  +   +        L  +Y   G    + K +V   PLG
Sbjct: 97  LETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAYTK-RV---PLG 152
Query: 191 VVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPEN 250
           V   I +WNYP          A+ +GN +V K SEN          I+  A    G P+ 
Sbjct: 153 VCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA----GLPKG 208
Query: 251 LVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 308
           L +VI G  +TG  LV+  D  K+   GS   GR +   A+  L  VT+ELGGK   IV 
Sbjct: 209 LFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 368
           DD D+      A+     SSGQ C+   R +V +   A F+  + +  +++  G PL   
Sbjct: 269 DDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328
Query: 369 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNVNHT 426
             +G L      EK+ + +     +GA ++  G   +    EGA   Y  PTV  +V   
Sbjct: 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADVTDD 385
Query: 427 MKLMQEEI 434
           M + +EEI
Sbjct: 386 MTIAREEI 393

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 186/390 (47%), Gaps = 26/390 (6%)
Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           Y+P      +S+T +    P+T K +G  PA  +A+ +  +  A+ AQK WAK + + R+
Sbjct: 21  YVPSN----ESDT-IDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 112 QFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW-----LLSEGEKWL 166
             LR     I E++ ++  +   + GK +  A + E+  T   I +     L  EG+  +
Sbjct: 76  NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGD--I 132
Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 226
            P      +  IHK       P GVV  I +WN+P       +  A+ +GN +V+K ++ 
Sbjct: 133 LPSDNQDEKIYIHKV------PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQE 186
Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
              +     RI + A    G P+ +++VI G     G+ L  S     I   GS   G+ 
Sbjct: 187 TPLATTELGRIAKEA----GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQ 242
Query: 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
           I + +++ +TPV LELGGK   +V DD D+   A+ A+     + GQ C   ER YVH  
Sbjct: 243 IYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHAS 302
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           +Y  F+++   +VK +  G P+     MG  C     + + ++V++A+ +GA +   G  
Sbjct: 303 VYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKT 362
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
             +       ++ PTV+V+V     ++ EE
Sbjct: 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEE 392

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 173/392 (44%), Gaps = 19/392 (4%)
Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
           I+I     +  S  K   + PAT + L       + +VD+ V  AR+A ++   W     
Sbjct: 23  IFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDA 82
Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
            +R + L  L   I   + L+  + + + GK   +A L ++    + + +     +K   
Sbjct: 83  SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG 142
Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
                 G    + +++    P+GV G I+ WN+P       +  A+  GN +V+K +E  
Sbjct: 143 RTIPMDGNFFTYTRSE----PVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 198
Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMI 284
             +      +I+ A    G P  +V+++ G+  T  A +SS   VDK+ F GS  VG++I
Sbjct: 199 PLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 254
Query: 285 MRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
              A K+ L  V+LELGGK   IV  D D+ +  + A +      GQ C  A R +V   
Sbjct: 255 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 314
Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           IY  FV +  +  K    G PL      G     E  EK+ +L+     +GA++   G  
Sbjct: 315 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 373
Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
                G    +  PTV  +V   M++ +EEI 
Sbjct: 374 ---PWGNKGYFIQPTVFSDVTDDMRIAKEEIF 402

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 25/377 (6%)
Query: 64  TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
           T ++   PA    +G  P+LS A + E +  + KA   WA  + K+R   LR     II 
Sbjct: 48  TTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIA 107
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHK 180
           + + I  I + + GK + +A  GE++     I W   E ++      P  ++  R  + +
Sbjct: 108 NADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIR 166
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
                  P+GV  AI  WN+P   I      A+ +G  ++++ ++    +      + + 
Sbjct: 167 ------QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEK 220
Query: 241 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
           A    G P  ++ ++TG A E G  L S  +V K+ F GS  VGR++M   + T+  ++L
Sbjct: 221 A----GIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISL 276
Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGG   FIV DD D+      A+ +  +++GQ C  A R YV R +Y  F  ++A  VK
Sbjct: 277 ELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336
Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFP 416
            +  G        +G +   +   K++  + DA+ KGA+++  G   G L       +F 
Sbjct: 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGL-------FFE 389
Query: 417 PTVIVNVNHTMKLMQEE 433
           P ++  V   M + +EE
Sbjct: 390 PGILTGVTSDMLVAKEE 406

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 31/345 (8%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
           W + S K+R   LR     +I++++ +  I + ++GK + +A  GEI+ +     + L  
Sbjct: 64  WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 162 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216
             +W   E R     +IH  AK     V   P+GV   I  WN+P   I   + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVI----TGFAETGEALVSS--V 269
             +V+K +E+  +S      +  A LA+  G P  + +VI        E GEA+ +   V
Sbjct: 175 CTVVVKPAEDTPFSA-----LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229
Query: 270 DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
            KI F GS   G++++ +A+ ++  V++ELGG   FIV D  +V      A+ +  +++G
Sbjct: 230 SKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG 289
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIV-KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
           Q C  + +F V R I+  FV   A+ + K++  G         G L   +  EK++  VN
Sbjct: 290 QTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349
Query: 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           DA+ KGA ++  G    L +     +F PT++ NV   M    EE
Sbjct: 350 DAVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEE 390

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 17/350 (4%)
Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
           +++ E V +AR A         + R Q L  L + I E ++ +    + D  K   +A  
Sbjct: 18  SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
            E++   E+I +++ +  +W   E           +  +   PLGVV  I +WNYPF+  
Sbjct: 78  EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEA 264
             PM+ A+ +GN +V+K SE +         II   L      ++L  VI G   ET E 
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD-----KDLYPVINGGVPETTEL 192
Query: 265 LVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
           L    D I++ GS GVG++IM  A+K LTPVTLELGGK    V  + D+    +      
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
             +SGQ C   +       I    V ++ K +K    G       D G +    H +++ 
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVM 311
Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            L+        + +A G  G     A  +Y  PT++ +V+    +MQEEI
Sbjct: 312 GLIE------GQKVAYGGTGD----AATRYIAPTILTDVDPQSPVMQEEI 351

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 27/363 (7%)
Query: 84  SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141
           ++ + +  +  AR+A     W++ + + R + +R +   I EH+E +  + + DTGKT+ 
Sbjct: 68  TKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLE 127
Query: 142 D--ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHK-----KAKVEFHPLGVVGA 194
           +  A + +I         L  +            G  MI       ++K+   P+GVV  
Sbjct: 128 ESYADMDDIHNVFMYFAGLADK-----------DGGEMIDSPIPDTESKIVKEPVGVVTQ 176
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
           I  WNYP       +  A+ +G  +V+K SE    +    F +++     VG P+  +++
Sbjct: 177 ITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE----VGFPKGTINL 232
Query: 255 ITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 311
           I G  +E G+ +     VD + F G    G+ IM+NA+  +T + LELGGK+  I+ DD 
Sbjct: 233 ILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292
Query: 312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 371
           D       A+      +GQ C+   R  V   I   F   +   VK +  G       +M
Sbjct: 293 DFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEM 352
Query: 372 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 431
           G +   EH  K+++ ++ A  +GA I   G      +     +F PTVI N + +M+++Q
Sbjct: 353 GPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQ 412
Query: 432 EEI 434
           EE+
Sbjct: 413 EEV 415

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 17/348 (4%)
Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
           + + V +AR+A       S + R Q L  L + I E+ + I    + D GK    +   E
Sbjct: 3   ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 62
Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
           +    E++   + E   W + E  +  R        +   PLGVV  I +WNYPF+    
Sbjct: 63  VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 122
Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-GFAETGEALV 266
           PM+ AV +GN +++K SE +      +   + A L      +NL  V+  G  ET E L 
Sbjct: 123 PMVGAVAAGNAVILKPSEVSG-----HMADLLATLIPQYMDQNLYLVVKGGVPETTELLK 177
Query: 267 SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 326
              D I++ GS  VG+++M  A+K LTPVTLELGGK    V  D D+    +        
Sbjct: 178 ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 237
Query: 327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 386
           +SGQ C   +       I    V ++ K +K    G       D G +    H ++++ L
Sbjct: 238 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGL 296
Query: 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +++      ++   G++   S     +Y  PT++V+V+    +MQEEI
Sbjct: 297 IDN-----QKVAHGGTWDQSS-----RYIAPTILVDVDPQSPVMQEEI 334

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTL+LGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ+C+   R +V  DIY  FV +     KS   G 
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 388 DVQDGMTIAKEEIF 401

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 36  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 95
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 96  LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 151
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 152 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 207
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 208 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 267
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ C    R +V  DIY  FV +     KS   G 
Sbjct: 268 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 327
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 328 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 381
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 382 DVQDGMTIAKEEIF 395

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 31/345 (8%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
           W + S K+R   LR     +I++++ +  I + ++GK + +A  GEI+ +     + L  
Sbjct: 64  WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 162 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 216
             +W   E R     +IH  AK     V   P+GV   I  WN+P   I   + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVI----TGFAETGEALVSS--V 269
             +V+K +E+  +S      +  A LA+  G P  + +VI        E GEA+ +   V
Sbjct: 175 CTVVVKPAEDTPFSA-----LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229
Query: 270 DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
            KI F GS   G++++ +A+ ++  V++ELGG   FIV D  +V      A+ +  +++G
Sbjct: 230 SKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG 289
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIV-KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 388
           Q    + +F V R I+  FV   A+ + K++  G         G L   +  EK++  VN
Sbjct: 290 QTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349
Query: 389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           DA+ KGA ++  G    L +     +F PT++ NV   M    EE
Sbjct: 350 DAVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEE 390

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ C    R +V  DIY  FV +     KS   G 
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 388 DVQDGMTIAKEEIF 401

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ C    R +V  DIY  FV +     KS   G 
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 388 DVQDGMTIAKEEIF 401

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ C    R +V  DIY  FV +     KS   G 
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 388 DVQDGMTIAKEEIF 401

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 23/374 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363
             I+  D D+    + A  A   + GQ C    R +V  DIY  FV +     KS   G 
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333
Query: 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIV 421
           P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV  
Sbjct: 334 PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFG 387
Query: 422 NVNHTMKLMQEEII 435
           +V   M + +EEI 
Sbjct: 388 DVQDGMTIAKEEIF 401

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 17/380 (4%)
Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
           P +   +   +P+T +        S  + D+ +  A+KA + W  +S  +R  F+  +L+
Sbjct: 37  PSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILE 96
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH 179
              +    + +  S + G  +  A   +  T    I   +   +++   E    G    +
Sbjct: 97  IYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEG----N 152
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII- 238
           ++A + +  +GVVG I  WN+P + +   ++ A+ +G  +V+K SE A  S   +  I+ 
Sbjct: 153 EQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILD 212
Query: 239 QAALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPV 295
           +AAL     P  + ++I G  A  G  L +  D   I F GS   G+ I +NAS TL  V
Sbjct: 213 EAAL-----PSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRV 267
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGGK A I+  D D+  + Q  VR    +SGQ+C    R  V + IY   +     I
Sbjct: 268 CLELGGKGANIIFADADIDAL-QRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            +    GP       +G +   E  +K+Q+L+   +D+GA ++  G+   L  G    Y+
Sbjct: 327 AEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT--GLPMGMERGYY 384
Query: 416 -PPTVIVNVNHTMKLMQEEI 434
             PTV  +V   M++ +EEI
Sbjct: 385 VRPTVFADVKPHMRIFREEI 404

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 16/373 (4%)
Query: 70  EPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129
           +PAT + LG        EVD     A +A + W+++  K+R+++L  + + I +H + + 
Sbjct: 48  DPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELA 107
Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 189
            +   D G+ +      ++    E   +     E  ++       R  ++   +V   P 
Sbjct: 108 VMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRV---PA 163
Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
           G VG I  WN P       +  A+  GN +V+K +E + ++      I++ A      P 
Sbjct: 164 GPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA----DLPP 219
Query: 250 NLVDVITGFAE-TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
            + +++ GF E  G ALV+   V  +   G    G+++MRNA+  L  ++ ELGGK   +
Sbjct: 220 GVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPAL 279
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
           V  D D+       V      +G+ C  + R  V   I+  FV +V +  +++  G PL 
Sbjct: 280 VFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD----QYFPPTVIVN 422
            + ++G L   EH +++   V     +GA +L  G     S    D     Y  PTV V 
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 423 VNHTMKLMQEEII 435
            NH MK+ QEEI 
Sbjct: 400 ENH-MKIAQEEIF 411

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 17/379 (4%)
Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
           T  + T+     PAT + L   P  +  E++  ++ A    K W  +S  QR Q LR + 
Sbjct: 2   TXXTATQALSVNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIG 61
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
           + +  H E   +  +R+ GK +  A   E+  +     W    G   L PE      +++
Sbjct: 62  QALRAHAEEXAQCITREXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPE-----PTLV 115
Query: 179 -HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 237
            +++A +E+ PLGV+ AI  WN+P   +    +  + +GN  ++K + N +  GC   + 
Sbjct: 116 ENQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVT--GCA--QX 171
Query: 238 IQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
           I   LA  G P  +   +    E     ++   +  +   GS   G  I   A   L   
Sbjct: 172 IARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKC 231
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGG D FIV +D D+    + AV    Q++GQ CA A+RF V   I   F  +    
Sbjct: 232 VLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAA 291
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
             ++  G PL  + D+G     +  ++L   V  ++ +GA +L     G         Y+
Sbjct: 292 AAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLL----LGGEKIAGEGNYY 347
Query: 416 PPTVIVNVNHTMKLMQEEI 434
             TV+ +V       ++E+
Sbjct: 348 AATVLADVTPDXTAFRQEL 366

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 177/404 (43%), Gaps = 25/404 (6%)
Query: 43  NQTPDNSF--IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK 100
           NQ P+  +  I+I        S+       P+T   + +     +A+VD  V  AR A +
Sbjct: 11  NQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQ 70
Query: 101 V---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW 157
           +   W +    +R + L  L   I   +  +  + + D GK  + + L ++    + + +
Sbjct: 71  LGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRY 130
Query: 158 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGN 217
                +K+        G    + +      P+GV G I+ WN+P       +  A+ +GN
Sbjct: 131 YAGWADKYHGKTIPIDGDYFSYTR----HEPVGVCGQIIPWNFPLLMQAWKLGPALATGN 186
Query: 218 GIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKIIF 274
            +V+KV+E    +  +   +I+ A    G P  +V+VI GF  T  A ++S   VDK+ F
Sbjct: 187 VVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNVIPGFGPTAGAAIASHEDVDKVAF 242
Query: 275 VGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCA 333
            GS  VG +I   A K+ L  VTLE+GGK   I+  D D+    + A  A   + GQ C 
Sbjct: 243 TGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCC 302
Query: 334 GAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393
              R +V  DIYA FV +     KS   G P   + + G        +K+   +    ++
Sbjct: 303 AGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEE 362
Query: 394 GAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEII 435
           G ++L  G        A D+  +  PTV  ++   M + +EEI 
Sbjct: 363 GLKLLCGGG------AAADRGYFIQPTVFGDLQDGMTIAKEEIF 400

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 19/373 (5%)
Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQ 125
           + PAT + +       + +VD+ V  AR+A ++   W      +R Q +  L   I   +
Sbjct: 41  FNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDR 100
Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
            L+  + S + GK    A L ++    + + +     +K         G    + +    
Sbjct: 101 LLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTR---- 156
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
             P+GV G I  WN P   +   +  A+  GN +++K +E    +      +I+ A    
Sbjct: 157 HEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEA---- 212
Query: 246 GAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGG 301
           G P  +V+++ G+  T  A +SS   VDK+ F GS  VG+MI   A+K+ L  VTLELG 
Sbjct: 213 GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGA 272
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
           K+  IV  D D+    + A +    + GQ+C  A + +V   IY  FV +  +  K    
Sbjct: 273 KNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVF 332
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
           G PL    + G         K+  L+     +GA++   G       G    +  PTV  
Sbjct: 333 GNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG----PWGNKGYFIQPTVFS 388
Query: 422 NVNHTMKLMQEEI 434
           NV   M++ +EEI
Sbjct: 389 NVTDDMRIAKEEI 401

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 20/379 (5%)
Query: 61  QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
            S   ++   PAT + +G     ++A+VD+ V  A      +  +S K+R+  L  ++K 
Sbjct: 20  NSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKE 79
Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIH 179
               ++ I +  + + G  +   SL E +     +   ++  +     E+    G  ++ 
Sbjct: 80  YENRKDDIVQAITDELGAPL---SLSERVHYQXGLNHFVAARDALDNYEFEERRGDDLVV 136
Query: 180 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
           K+A      +GV G I  WN+P +     + AA  +G+ +V+K SE   ++      I+ 
Sbjct: 137 KEA------IGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV----ILA 186
Query: 240 AALAAVGAPENLVDVITG-FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 296
                VG P+ + +++ G  A  G  L     V    F GS   G  I   A+K    V+
Sbjct: 187 EIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVS 246
Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356
           LELGGK  +IV DDVD+   A+      + ++GQ C    R  V   I   F++++ +  
Sbjct: 247 LELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQF 306
Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
             V  G P      +G +   +  +++QN +N  +++GAE+   G      EG    YF 
Sbjct: 307 SQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP--GKPEGLEKGYFA 364
Query: 417 -PTVIVNVNHTMKLMQEEI 434
            PT+ +NV++   + QEEI
Sbjct: 365 RPTIFINVDNQXTIAQEEI 383

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 25/375 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
             I+  D D+    + A  A   + GQ +CAG+ R +V  DIY  FV +     KS   G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
            P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV 
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
            +V   M + +EEI 
Sbjct: 387 GDVQDGMTIAKEEIF 401

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 25/375 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
             I+  D D+    + A  A   + GQ +CAG+ R +V  DIY  FV +     KS   G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
            P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV 
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
            +V   M + +EEI 
Sbjct: 387 GDVQDGMTIAKEEIF 401

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 7/284 (2%)
Query: 75  KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134
           K++ Y   LS A++D   +  +      A +    R+Q L  L + +I ++E +    + 
Sbjct: 20  KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
           D GK      L EI     +I + L+  ++W+ P    S   +   +  V   P GV   
Sbjct: 77  DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
           I  +NYP +    P++ A+  GN  +IK SE    +     +II  A A    PE +  +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 255 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314
             G  E    L    D I F GSP VG+++M+ A+K LTPV LELGGK   IV  D D+ 
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
                 +     +SGQ C   +  YVH  +    + ++ + VK+
Sbjct: 253 QTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKT 296

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQEL 127
           P+T + +       + +VD+ V  AR A ++   W +     R + L  L   I   +  
Sbjct: 42  PSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTY 101
Query: 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  + + D GK  V + L ++    + + +     +K+        G    + +      
Sbjct: 102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HE 157
Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           P+GV G I+ WN+P       +  A+ +GN +V+KV+E    +  +   +I+ A    G 
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GF 213
Query: 248 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKD 303
           P  +V+++ GF  T  A ++S   VDK+ F GS  +GR+I   A S  L  VTLELGGK 
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKS 273
Query: 304 AFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
             I+  D D+    + A  A   + GQ  CAG+ R +V  DIY  FV +     KS   G
Sbjct: 274 PNIIMSDADMDWAVEQAHFALFFNQGQCXCAGS-RTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 420
            P   K + G        +K+   +N    +GA++L  G        A D+  +  PTV 
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 421 VNVNHTMKLMQEEII 435
            +V   M + +EEI 
Sbjct: 387 GDVQDGMTIAKEEIF 401

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 176/421 (41%), Gaps = 32/421 (7%)
Query: 21  LMLIPPNVPSIDVDASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYF 80
           L L+P   P++++  +              I+I    +  +S        PAT + +   
Sbjct: 4   LQLLPSPTPNLEIKYTK-------------IFINNEWQNSESGRVFPVCNPATGEQVCEV 50
Query: 81  PALSRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG 137
               + ++D+ V  AR A     VW +    +R + L  L   +   +  +  + S + G
Sbjct: 51  QEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGG 110
Query: 138 KTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
           K  + A   ++    + + +     +K         G      +      P+GV G I+ 
Sbjct: 111 KPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTR----HEPIGVCGQIIP 166
Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
           WN+P       +  A+  GN +VIK +E    S  +   +I+ A    G P  +V+++ G
Sbjct: 167 WNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEA----GFPPGVVNILPG 222
Query: 258 FAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDV 313
           +  T  A ++S   +DKI F GS  VG++I   A ++ L  VTLELGGK   I+  D D+
Sbjct: 223 YGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADL 282
Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373
            +  + A +    + GQ C    R +V   IY  FV +  +  K    G P     + G 
Sbjct: 283 DYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGP 342
Query: 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
               +   K+  L+   + +GA++   G       G    +  PTV  NV   M++ +EE
Sbjct: 343 QIDKKQYNKILELIQSGVAEGAKLECGGK----GLGRKGFFIEPTVFSNVTDDMRIAKEE 398
Query: 434 I 434
           I
Sbjct: 399 I 399

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 27/352 (7%)
Query: 90  ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIM 149
           ++  +AR+AQ  W +   + R   L+   + I+  +E + E    DTG+  +        
Sbjct: 32  QQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSI-------- 83
Query: 150 TTCEKITWLLSEGEKW--LKPEY---RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204
            T  +I   L+  ++W  L PE     +   S+     +    P  +VG I  WN+P   
Sbjct: 84  -TVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTL 142
Query: 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV---ITGFAET 261
                + A+ +G  +V+K SE A        R +   L A+     L DV   + G  ET
Sbjct: 143 SXIDTIPALLAGCAVVVKPSEIAP-------RFVAPLLXALNTVPELRDVLIFVEGGGET 195
Query: 262 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321
           G  L++ VD + F GS   GR +   A++   P  LELGGKD  IV +  ++       +
Sbjct: 196 GANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAIL 255
Query: 322 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381
             A+ ++GQ+C   ER YV    +  F  Q+      +    PL     +G +   + + 
Sbjct: 256 WGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAG 315
Query: 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
            + + + DA++KGA I   G    L  G    +  PTV  NVNH+ K+  EE
Sbjct: 316 IINDHILDAVEKGAVIHCGGKVEELGGG---WWCRPTVXTNVNHSXKVXTEE 364

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 23/341 (6%)
Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P +++ +   PALSR E  E +  A K ++V       +R   L  + K I E +E + +
Sbjct: 19  PYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78
Query: 131 ISSRDTGKTM------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
           I + D GK +      V+ S+G    T +   + + E    + P   S  R +  ++   
Sbjct: 79  ILAIDAGKPIKQARVEVERSIG----TFKLAAFYVKEHRDEVIP---SDDRLIFTRR--- 128
Query: 185 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
              P+G+VGAI  +N+P +   + +  A+ +GN IV   S  A        +II+ AL  
Sbjct: 129 --EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKK 186
Query: 245 VGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
              P  + +++TG  E  G+ +V    V+ I F GS  VG +I + A      + LELGG
Sbjct: 187 YNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
            +  IV  D D+       ++ +   +GQ C       V   I   F+       K ++ 
Sbjct: 245 VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
           G PL  K D+G L  +EH+E ++ +V  A+D+G ++L  G 
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK 345

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 7/284 (2%)
Query: 75  KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 134
           K++ Y   LS A++D   +  +      A +    R+Q L  L + +I ++E +    + 
Sbjct: 20  KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 135 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 194
           D GK      L EI     +I + L+  ++W+ P    S   +   +  V   P GV   
Sbjct: 77  DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 195 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 254
           I  +NYP +    P++ A+  GN  +IK SE    +     +II  A A    PE +  +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 255 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 314
             G  E    L    D I F GSP VG+++M+ A+K LTPV LELGGK   IV  D D+ 
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
                 +     +SGQ     +  YVH  +    + ++ + VK+
Sbjct: 253 QTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKT 296

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 155/345 (44%), Gaps = 20/345 (5%)
Query: 95  ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
           A+KAQK WAKS+ + R+  L+    Y+ E+++ I  + +R+TG T++ +++       E+
Sbjct: 53  AQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-----ELEQ 107
Query: 155 ITWLLSEGEKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAA 212
              +L E   +       +     +  K  K+   PLGV+ +I  +N+P +     +  A
Sbjct: 108 TIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPA 167
Query: 213 VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV-ITGFAETGEALVSS-VD 270
           +  GN +V K     + SG     II  A    G P  +++V +T   E G+ ++++ + 
Sbjct: 168 IALGNSVVHKPDIQTAISGG---TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIP 224
Query: 271 KII-FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329
           ++I F GS  VGR I   A +    + LELGG + F V  D DV      A+       G
Sbjct: 225 RLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQG 284
Query: 330 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389
           Q C    R  VH+D+Y  FV +    VK +  G     K  +G L      EK   ++  
Sbjct: 285 QICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQ 344
Query: 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           A   G E+   G         V     P V V  ++  K+ Q E+
Sbjct: 345 AKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSKIAQTEL 382

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+LELGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+NC  A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+L+LGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+NC  A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 167/377 (44%), Gaps = 23/377 (6%)
Query: 64  TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE 123
           +K Q   P T +    +   +  ++DE +  A    K W       R + L  +   + E
Sbjct: 4   SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKE 63
Query: 124 HQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWLLSEGEKWLKPEYRSS--GRSMIHK 180
           H++ + +  + + GK + ++   E +  C  I  +    G + LKP   +S  G +   K
Sbjct: 64  HEDELAKXXTLEXGKLLSESK--EEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLK 121
Query: 181 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 240
           ++       GV+ A   WN+P + +          GN I++K + N   S     +II+ 
Sbjct: 122 QS------TGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKR 175
Query: 241 ALAAVGAPE-NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
           A    GAPE +L+++   + +  + +    +  +   GS   G  +   A K L   T E
Sbjct: 176 A----GAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXE 231
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGG DAFIV DD D   +  +   A   + GQ C  ++R  V +  Y   + ++  +  +
Sbjct: 232 LGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSN 291
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL-SEGAVDQYFPP 417
           + AG PL     +      +  EKL+  V +A+D GA++  +  +  + S+GA   +F P
Sbjct: 292 LKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQ--YPEIDSKGA---FFRP 346
Query: 418 TVIVNVNHTMKLMQEEI 434
           T++ ++     +  +E+
Sbjct: 347 TILTDIAKDNPVFDKEV 363

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+L LGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+NC  A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+LELGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+N   A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+LELGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+N   A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 171/396 (43%), Gaps = 26/396 (6%)
Query: 47  DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
           +N   YI  R +          Y PAT   +   P+    +V   V   + A ++     
Sbjct: 10  ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWP 69
Query: 107 FKQRRQFLRILLKYIIEHQELICEISSRDTGKTM------VDASLGEIMTTCEKITWLLS 160
            + RR++L  +   + E++E I  I   + GK        VD + G      + I+ L S
Sbjct: 70  IETRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 161 EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220
                  PE        +H      + P+GV G IV WN+P   I   + AA+ +G   V
Sbjct: 130 H----TIPEKPKDCTWTVH------YRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSV 179
Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGS 277
           IK +     +   +F +       +  P+  V+++ G A   G+ L    D   + F GS
Sbjct: 180 IKPASETPLTXIAFFSVXDK----LDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGS 235
Query: 278 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 337
             VGR ++ + ++ +  + LELGG   FIV DD D+   A   +    +  GQ C  A R
Sbjct: 236 TEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANR 295
Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397
            +VH  +   F  ++A+ V   + G       D+G L   +  +K++  + DALDKGA +
Sbjct: 296 IFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASL 355
Query: 398 LARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
           +A      L +G    +FPPTV+  V+      QEE
Sbjct: 356 VAGKQPAELGDGL---FFPPTVVQGVDREXCCYQEE 388

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 34/364 (9%)
Query: 86  AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 137
           ++VD+ VA A++A    +W K + + R + L  L   + +HQE +  I + D G      
Sbjct: 74  SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 138 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
            KT V  S+         C+KI     +G      + R +    + KK      P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253
            ++ WNYP   +     A + +GN +VIK ++    +   +  +   A    G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 254 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 309
           ++ G     G+ L    D  KI F GS  VG+ IM++ A   +  V+L LGGK   I+  
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 369
           D D+    Q+ + +   + G+N   A R +V   I+  FV +V + V+ +  G PL    
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 370 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 429
           + G      H  KL       + +GA ++  G+   +       +F PTV  +V   M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 430 MQEE 433
            +EE
Sbjct: 416 AKEE 419

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 160/376 (42%), Gaps = 20/376 (5%)
Query: 65  KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124
           K   Y PAT   L      S  +VD  V  A  A   W +++ K R + L  L   I E+
Sbjct: 39  KQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98
Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGE---KWLKPEYRSSGRSMIHKK 181
            ++  E+ SR+ GK +  A   EI    +   +              EY     SMI + 
Sbjct: 99  GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRD 158
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
                 PLGVV +I  WNYP       +  A+ +GN +V+K SE    +      +  A 
Sbjct: 159 ------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA-----LKLAE 207
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
           LA    P  +V+++ G  +T G+ L     V  +   GS   G  I+ + + ++    +E
Sbjct: 208 LAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHME 267
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV DD D+  V +        ++GQ+C  A R Y  + IY   V ++   V +
Sbjct: 268 LGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT 327
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
           + +G P     ++G L  L H E++   V +A   G   +  G       G    Y+ PT
Sbjct: 328 LKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG---YYYAPT 384
Query: 419 VIVNVNHTMKLMQEEI 434
           ++        ++Q+E+
Sbjct: 385 LLAGALQDDAIVQKEV 400

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 150/336 (44%), Gaps = 14/336 (4%)
Query: 102 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 161
           W + S  +R +    +   I+  QE +  I S + GK +  A  GEI    +  ++   +
Sbjct: 79  WPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQ 137
Query: 162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221
                   + + G   +     V   P+GVVG I  WN+PF      +  A+ SG  +V+
Sbjct: 138 ARALEGQTHNNIGDDRL---GLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVL 194
Query: 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSP 278
           K SE  S +     R+ + A  A G P+ + +V+TG+ +  G+ L    +VD + F GS 
Sbjct: 195 KPSEFTSGT---SIRLAELAREA-GIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSV 250
Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
            VG  +   A++T+  V LELGGK   IV  D D+   A         ++GQ C    R 
Sbjct: 251 RVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL 310
Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
            V   I      ++  I + V+ G PL  +  +GA     H+EK+ + V   +  GAE+L
Sbjct: 311 LVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELL 370
Query: 399 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
             G       G    Y+ PTV   V     + +EEI
Sbjct: 371 LGGERIGREAGL---YYAPTVFAGVTPDXSIAREEI 403

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 159/377 (42%), Gaps = 16/377 (4%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           +E +     P T   +      S A++D  V  A +A   W++++  +R   L  +   I
Sbjct: 38  TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAI 97
Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKK 181
            +  +    + + + GK +      E+    +   +          P   ++G  +    
Sbjct: 98  EKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP---AAGEYLPGHT 154
Query: 182 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 241
           + +   P+G+VG+I  WNYP       +  A+  GN +V K SE    +     R+I   
Sbjct: 155 SXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI 214
Query: 242 LAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
           L     PE +V+VITG  ET G AL++   V  +   G    G+ ++  A+KT+    LE
Sbjct: 215 L-----PEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLE 269
Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   IV  D D+  V          ++GQ+C  A R Y    IY   V+ +   V +
Sbjct: 270 LGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVST 329
Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPP 417
           +        + ++G L      +++ + V  A D K  EI   G  G   EG    +F P
Sbjct: 330 IRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS-DEGF---FFQP 385
Query: 418 TVIVNVNHTMKLMQEEI 434
           TV+       ++++ E+
Sbjct: 386 TVVAGATQEDEIVRREV 402

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 17/394 (4%)
Query: 47  DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
           DN  +Y    G    S   +  Y PA  + +      + AE +E V + R+A K+WA   
Sbjct: 21  DNPGVY---NGSWGGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIP 77
Query: 107 FKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGEK 164
             +R + +R +   + +  +++  + S + GK  V+    + E +  C+    L      
Sbjct: 78  APKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYAVGLSRMIGG 137
Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224
            + P  R  G ++I      +++P+G+VG I ++N+P          A+  GN  + K +
Sbjct: 138 PVLPSERP-GHALIE-----QWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGA 191
Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGR 282
                +     +I+   L     P  +  +  G A+ G A+     VD + F GS  VG+
Sbjct: 192 PTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGK 251
Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
           M+     +      LELGG +A IV +D D+  V   AV A++ ++GQ C    R  +H 
Sbjct: 252 MVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHE 311
Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
            ++   V ++AK  K V  G P       G L   +  ++    +  A  +G  ++  G 
Sbjct: 312 SVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGK 371
Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIIL 436
                      Y  PT+I  + H   ++  E  +
Sbjct: 372 VMDRP----GNYVEPTIITGLAHDAPIVHTETFV 401

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 14/372 (3%)
Query: 66  VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125
           +  Y PA  + +      S A+ +E V +AR+A K+WA     +R + +R +   + E  
Sbjct: 39  ITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKI 98
Query: 126 ELICEISSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK 183
           +++  + S + GK +V+    + E +  C+    L       + P  RS G ++I     
Sbjct: 99  QVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERS-GHALIE---- 153
Query: 184 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            +++P+G+VG I ++N+P          A+  GN  + K +   S       +II   L 
Sbjct: 154 -QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLE 212
Query: 244 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
               P  +  +  G A+ G A+     V+ + F GS  VG+ +     +      LELGG
Sbjct: 213 DNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGG 272
Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
            +A I  +D D+  V   A+ AA+ ++GQ C  A R ++H  I+   V+++ K    +  
Sbjct: 273 NNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRV 332
Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
           G P       G L   +        V +A  +G  ++    +G         Y  PT++ 
Sbjct: 333 GNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV----YGGKVMDRPGNYVEPTIVT 388
Query: 422 NVNHTMKLMQEE 433
            + H   +   E
Sbjct: 389 GLGHDASIAHTE 400

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 167/389 (42%), Gaps = 23/389 (5%)
Query: 57  GRTPQSETKVQCYEPATMK-YLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G   ++E K+    PA  +  +G     ++   ++ +  A KA + W  +  ++R   L 
Sbjct: 44  GERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAVLF 103
Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
             +  +   +     +  ++ GK   +A       T E I ++     + ++        
Sbjct: 104 RAVAKVRRKKHEFSALLVKEAGKPWNEAD----ADTAEAIDFMEYYARQMIELAKGKPVN 159
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
           S   ++ +  + P GV   I  WN+ F  +    +A + +GN +V+K +  A      + 
Sbjct: 160 SREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFV 219
Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT- 291
            +++ +    G P+ +V+ + G  AE G+ LV       I F GS  VG  I   A+K  
Sbjct: 220 EVLEES----GLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQ 275
Query: 292 -----LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA 346
                L  V  E+GGKD  +V +D D+   AQ    +A   +GQ C+   R  VH  +Y 
Sbjct: 276 PGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYD 335
Query: 347 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 406
             + +V +I +S   G P +    MG +       K+ + +    ++G   L  G  G  
Sbjct: 336 EVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDD 393
Query: 407 SEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
           S+G    +  PT+  +++   +LMQEEI 
Sbjct: 394 SKG---YFIEPTIFADLDPKARLMQEEIF 419

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 27/390 (6%)
Query: 57  GRTPQSETKVQCYEPATMKYLGYFPALSRAEVD---ERVAQARKAQKVWAKSSFKQRRQF 113
           G    +E K+Q + PA    L    ++S+A  D   + +  A +A + W   + ++R   
Sbjct: 44  GERVTTEDKIQSWNPARKDQL--VGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANI 101
Query: 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS 173
           L      I   +         + GK   +A       T E I +L     + ++      
Sbjct: 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD----ADTAEAIDFLEYYARQMIELNRGKE 157
Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233
             S   ++ +  + P+GV   I  WN+    +    +A + +GN +V+K +         
Sbjct: 158 ILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217
Query: 234 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG-RM-----I 284
           +  +++ A    G P+ +++ + G  AE G+ LV       I F GS  VG R+     +
Sbjct: 218 FVEVLEDA----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273
Query: 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
           +R     L  V +E+GGKD  +V  D D+   A+  + +A   SGQ C+   R  +H+D+
Sbjct: 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
Query: 345 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 404
           Y   + +   + K+++ G P      MG +   +  EK+ + +     +G   L  G  G
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGEG 391
Query: 405 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
             S G    +  PT+I +++    +MQEEI
Sbjct: 392 DSSTGF---FIQPTIIADLDPEAVIMQEEI 418

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 27/383 (7%)
Query: 63  ETKVQCYE----PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
           E+K   YE    PAT + L   P  ++ ++D     A +A K W+K +  +R + L    
Sbjct: 16  ESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ 75
Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
           + + +H+E +  + + + GK   +A LGE+    E + +        +       G S+ 
Sbjct: 76  QLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMM-------GDSLA 127
Query: 179 HKKAKVEF----HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 234
                VE     +P+GVVG I  +N+P          A+  GN  ++K SE         
Sbjct: 128 SIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKL 187
Query: 235 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292
             + + A    G P+ + +V+ G  +    ++    +  I FVGS  VG  + +  S+ L
Sbjct: 188 VELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
             V    G K+  IV +D ++       V AA  S+G+ C       V   I   F++++
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
            + V  +  G  L     +G +   ++ ++  + +   L++GA ++  G   ++S+   D
Sbjct: 304 QEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSD---D 359
Query: 413 QYF-PPTVIVNVNHTMKLMQEEI 434
            YF  PT+  NV   M + ++EI
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEI 382

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
           S  +++   P  +  +    + SR EV ER       +  W+       +R   LR    
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
            I  + ++  E+   + GK    A++GE+    +++      L   G  ++  ++     
Sbjct: 89  IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
             +  +  V   PLGVV AI  +NYP  +  N +  +   GN +V+K S +         
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           +    AL   G P + + ++    +  E +V+   V  + F GS  VG  +++     + 
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
              +ELGG D  IV +D D+   A    R     +GQ C   +     R +Y   V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           K + S+  G P     D+G L      +++   + DA++KG  +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
           S  +++   P  +  +    + SR EV ER       +  W+       +R   LR    
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
            I  + ++  E+   + GK    A++GE+    +++      L   G  ++  ++     
Sbjct: 89  IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
             +  +  V   PLGVV AI  +NYP  +  N +  +   GN +V+K S +         
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           +    AL   G P + + ++    +  E +V+   V  + F GS  VG  +++     + 
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
              +ELGG D  IV +D D+   A    R     +GQ C   +     R +Y   V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           K + S+  G P     D+G L      +++   + DA++KG  +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 19/348 (5%)
Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLK 119
           S  +++   P  +  +    + SR EV ER       +  W+       +R   LR    
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAAD 88
Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGR 175
            I  + ++  E+   + GK    A++GE+    +++      L   G  ++  ++     
Sbjct: 89  IIERNLDVFAEVLVMNAGKPK-SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD-- 145
Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
             +  +  V   PLGVV AI  +NYP  +  N +  +   GN +V+K S +         
Sbjct: 146 -TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 204
Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           +    AL   G P + + ++    +  E +V+   V  + F GS  VG  +++     + 
Sbjct: 205 K----ALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 258
Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
              +ELGG D  IV +D D+   A    R     +GQ C   +     R +Y   V +VA
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 318
Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
           K + S+  G P     D+G L      +++   + DA++KG  +LA G
Sbjct: 319 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG 366

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 155/362 (42%), Gaps = 31/362 (8%)
Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
           S A+VD     A+KAQ  WA +   +R   +    + + EH+E I E   +++G T   A
Sbjct: 48  SIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA 107
Query: 144 SL-----GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 198
           +L     G I          +      + P       + +++ AK      GVVG I  W
Sbjct: 108 NLEITLAGNITKESASFPGRV---HGRISPSNTPGKENRVYRVAK------GVVGVISPW 158
Query: 199 NYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 257
           N+P +     +  A+  GN +VIK  S+     G    RI + A    G P  ++  + G
Sbjct: 159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEA----GVPAGVISTVAG 214
Query: 258 F-AETGEALVS-SVDKII-FVGSPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD 312
             +E G+  V+ +V K+I F GS  VGR +   A     +  V LELGG   F+V  D D
Sbjct: 215 AGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADAD 274
Query: 313 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 372
           +   AQ A   A    GQ C    R  V   ++  F+ +  + VK++  G P A    +G
Sbjct: 275 IDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVG 334
Query: 373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 432
            +        L+  +  A  +GA +   G      EG   +   P V  +V   M++ +E
Sbjct: 335 PVINDSQLSGLKEKIELAKKEGATVQVEGPI----EG---RLVHPHVFSDVTSDMEIARE 387
Query: 433 EI 434
           EI
Sbjct: 388 EI 389

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 20/259 (7%)
Query: 134 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193
           R+ GKT+ DA L E+    +   +  ++G K    E    G +   +   +     GV  
Sbjct: 598 REGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFV 654
Query: 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV---GAPEN 250
           AI  WN+P       + AA+ +GN +V K +E          RI + A+A +   G P++
Sbjct: 655 AISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTP-------RIAREAVALLHEAGIPKS 707
Query: 251 LVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKT--LTPVTLELGGKDAF 305
            + ++TG    G AL +  D   ++F GS  V R I R  A+K   + P+  E GG +A 
Sbjct: 708 ALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAM 767
Query: 306 IVCDDVDVP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364
           I  D   +P  VA   V +A +S+GQ C+     +V  D+    +  VA   + +  G P
Sbjct: 768 I-ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDP 826
Query: 365 LAGKYDMGALCLLEHSEKL 383
                 +G +  +E  ++L
Sbjct: 827 SDVATHVGPVIDVEAKQRL 845

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
           + PLG    I  WN+P       ++  V  GN ++ K +E+A   G   F I   A    
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
           G P  +V+ + G  E  G  LV    +  I F GS  VG  I   A + L P        
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            +E GGKDA IV +  D    A+  V +A    GQ C+ A R  + +  Y   + +V K 
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            + +S GP      D+G +   E   K+ + +    ++G  +L     G   EG  + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
             PTV   V    ++ QEEI 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
           + PLG    I  WN+P       ++  V  GN ++ K +E+A   G   F I   A    
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
           G P  +V+ + G  E  G  LV    +  I F GS  VG  I   A + L P        
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            +E GGK+A IV +  D    A+  V +A    GQ C+ A R  + +  Y   + +V K 
Sbjct: 286 YVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            + +S GP      D+G +   E   K+ + +    ++G  +L     G   EG  + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
             PTV   V    ++ QEEI 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 24/322 (7%)
Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 146
           +VD  V  AR+A   WA+   +QR + L      +    + +  +   +TGK + +++  
Sbjct: 43  QVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT- 101
Query: 147 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206
           E+ +   K+   +   + + +     SG  +    A +   P GVV     +N+P H   
Sbjct: 102 EVTSXVNKVAISV---QAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPN 157
Query: 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRI-IQAALAAVGAPENLVDVITGFAETGEAL 265
             ++ A+ +GN +V K SE          +  IQA L     P  +++++ G  ETG AL
Sbjct: 158 GHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGL-----PAGVLNLVQGGRETGVAL 212
Query: 266 VS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
            +   +D + F GS   G ++      +    + LE GG +  +V +  D+       ++
Sbjct: 213 AAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQ 272
Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCL 376
           +A  S+GQ C  A R  V +  +   +  +A++V +VSA   + G++D       GA+  
Sbjct: 273 SAFISAGQRCTCARRLLVPQGAWGDAL--LARLV-AVSATLRV-GRFDEQPAPFXGAVIS 328
Query: 377 LEHSEKLQNLVNDALDKGAEIL 398
           L  +E L       + KGA+ L
Sbjct: 329 LSAAEHLLKAQEHLIGKGAQPL 350

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 23/261 (8%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
           + PLG    I  WN+P       ++  V  GN ++ K +E+A   G   F I   A    
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 246 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 295
           G P  +V+ + G  E  G  LV    +  I F GS  VG  I   A + L P        
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            +E GGKDA IV +  D    A+  V +A    GQ  + A R  + +  Y   + +V K 
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKR 345
Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            + +S GP      D+G +   E   K+ + +    ++G  +L     G   EG  + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 416 -PPTVIVNVNHTMKLMQEEII 435
             PTV   V    ++ QEEI 
Sbjct: 399 IAPTVFTEVPPKARIAQEEIF 419

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 11/336 (3%)
Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           + PAT +  G     S A++   V  A+ AQ  WA ++ ++R +     ++ + ++   +
Sbjct: 47  FNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFXKFVQLLNDNXNEL 106
Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
            E  SR+ GKT+ DA  G+I+   E   +++       K E+       I   +  +  P
Sbjct: 107 AEXLSREHGKTIDDAK-GDIVRGLEVCEFVIGI-PHLQKSEFTEGAGPGIDXYSIRQ--P 162
Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           +G+   I  +N+P          A+  GN  ++K SE          R+ +  + A G P
Sbjct: 163 VGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDP---SVPIRLAELXIEA-GLP 218
Query: 249 ENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
             +++V+ G     +A+++  D   + FVGS  + R +   A+          G K+  I
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           +  D D+   A   + A   S+G+ C A +    V  +     + ++   V+S+  GP  
Sbjct: 279 IXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYT 338
Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401
             K D G +   E  +++++L++  +++GA+++  G
Sbjct: 339 DEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG 374

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 110/268 (41%), Gaps = 36/268 (13%)
Query: 186 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
           + P GV   I  WN+P         AA+ +GN +V K S   S  G     + + A    
Sbjct: 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA---- 719
Query: 246 GAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASK------TLTPVT 296
           G PE + +   G     G+ LV   D   I F GS   G  I+  A+K       +  + 
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 297 LELGGKDAF----IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
            E+GGK+A         D  VPHV    + +A    GQ C+   R  V   +Y  F+ ++
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERL 835
Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV 411
             + K+   GP       MGA+          +    ++ + AEI  R   GH L E  V
Sbjct: 836 VSMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPV 885
Query: 412 ---DQYF-PPTVIVNVNHTMKLMQEEII 435
              + YF P T+I  +    ++ QEEI 
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIF 913

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 40/267 (14%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           G V AI  +N  F  I   +  A    GN ++ K S+ A  +    +RI++ A    G P
Sbjct: 202 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 255
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLEL 299
            N++  +     T G+ + SS  +  I F GS    + + R  +      +T   +  E 
Sbjct: 256 PNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGEC 315
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK+   V    DV  V    +R+A +  GQ C+   R YV + ++     ++ +    +
Sbjct: 316 GGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375
Query: 360 SAGPP-------LAGKYDMGALC----LLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
             G P        +   D  A       LEH+    +L          ILA G       
Sbjct: 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL---------SILAGGQCNE--- 423
Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEII 435
            +V  Y  P +I + +    +M+EEI 
Sbjct: 424 -SVGYYVEPCIIESKDPQEPIMKEEIF 449

>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-G 146
           V+     A +A   +  SS K+R  FLR +   I    E I EI S++TG  + +A L G
Sbjct: 65  VNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETG--LPEARLNG 122
Query: 147 EIMTTCEKITWLLSEGEKW---------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
           E   T  ++       EK            PE + + R  I    ++   P+G V    +
Sbjct: 123 ERGRTTGQLRLFADHIEKGDYLDRRVDAAXPERQPAPRQEI----RLVQRPVGPVAVFGA 178
Query: 198 WNYP--FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 255
            N+P  F        AA+ +G  +V+K       +G      + AA+   G    +  +I
Sbjct: 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLI 238
Query: 256 TGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL--ELGGKDAFIVCDD 310
            G + + G ALV    +  + F GS   GR +    +    P+    ELG  +   +  +
Sbjct: 239 QGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPE 298
Query: 311 VDVPHVAQIAVRAALQSSGQNCAGA 335
                    A++A  ++ GQ  AG+
Sbjct: 299 ---------ALKARAETLGQGWAGS 314

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           G V AI  +N  F  I   +  A    GN ++ K S+ A  +    +RI++ A    G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
            N++  +       G+ + SS  +  I F GS    + + +  ++      T   +  E 
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK+   V    DV  V    +R+A +  GQ C+   R YV   ++     ++ +    +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
             G P     D G                  LEH+    +L          ILA G    
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
             + +V  +  P ++ + +    +M+EEI 
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           G V AI  +N  F  I   +  A    GN ++ K S+ A  +    +RI++ A    G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
            N++  +       G+ + SS  +  I F GS    + + +  ++      T   +  E 
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK+   V    DV  V    +R+A +  GQ C+   R YV   ++     ++ +    +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
             G P     D G                  LEH+    +L          ILA G    
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
             + +V  +  P ++ + +    +M+EEI 
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 46/270 (17%)
Query: 190 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           G V AI  +N  F  I   +  A    GN ++ K S+ A  +    +RI++ A    G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 249 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 299
            N++  +       G+ + SS  +  I F GS    + + +  ++      T   +  E 
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GGK+   V    DV  V    +R+A +  GQ C+   R YV   ++     ++ +    +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 360 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 405
             G P     D G                  LEH+    +L          ILA G    
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEII 435
             + +V  +  P ++ + +    +M+EEI 
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIF 452

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	439
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	3e-83
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	2e-80
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	3e-80
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-79
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	2e-79
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-79
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	2e-79
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	3e-79
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	9e-79
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	4e-77
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	6e-76
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	7e-76
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	2e-75
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	2e-75
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	8e-75
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	8e-74
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	3e-73
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	7e-73
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-71
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	2e-71
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-71
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	2e-71
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	5e-70
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	9e-70
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	3e-69
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	3e-69
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	3e-69
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	6e-69
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	5e-68
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	9e-67
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	2e-66
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	3e-65
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	4e-64
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	5e-64
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-63
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	3e-62
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	4e-62
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-57
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-57
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	2e-52
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	4e-52
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-51
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-50
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	4e-40
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	6e-39
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	8e-39
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	1e-05

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  263 bits (675), Expect = 3e-83
 Identities = 93/392 (23%), Positives = 146/392 (37%), Gaps = 39/392 (9%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
               S+       P     +      S A+VD     A+KAQ  WA +   +R   +   
Sbjct: 22  VEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRA 81

Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW---LKPEYRSSG 174
            + + EH+E I E   +++G T   A   EI           S   +    + P      
Sbjct: 82  AELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHGRISPSNTPGK 140

Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
            + +++         GVVG I  WN+P +       P LA    GN +VIK + +   +G
Sbjct: 141 ENRVYRV------AKGVVGVISPWNFPLNLSIRSVAPALAV---GNAVVIKPASDTPVTG 191

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
                I        G P  ++  + G     G+  V+      I F GS  VGR +   A
Sbjct: 192 ---GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248

Query: 289 --SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHR 342
                +  V LELGG   F+V  D D+      A +AA        GQ C    R  V  
Sbjct: 249 INGGPMKTVALELGGNAPFVVLADADI----DAAAQAAAVGAFLHQGQICMSINRVIVDA 304

Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
            ++  F+ +  + VK++  G P A    +G +        L+  +  A  +GA +   G 
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP 364

Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                     +   P V  +V   M++ +EEI
Sbjct: 365 IE-------GRLVHPHVFSDVTSDMEIAREEI 389

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  256 bits (656), Expect = 2e-80
 Identities = 111/379 (29%), Positives = 173/379 (45%), Gaps = 40/379 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA+   LG  PALS+ EV++ +  A+ AQK+W      +R   L      + E +E+I E
Sbjct: 34  PASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGE 93

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW--------LKPEYRSSGRSMIHKKA 182
           +   +  K    A +GE+  T + I     E  +               S   +++ ++ 
Sbjct: 94  LIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVERE- 151

Query: 183 KVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
                PLGVV AI  +NYP       I  P L     GN +V K +   S SG    +++
Sbjct: 152 -----PLGVVLAISPFNYPVNLAAAKIA-PALVT---GNTVVFKPATQGSLSG---IKMV 199

Query: 239 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
           +A   A GAPE ++ V+TG     G+ LV    +D I F G    G  I   A   + PV
Sbjct: 200 EALADA-GAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPV 256

Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
            LELGGKD  IV DD D+   A   V  A   SGQ C   +R +V   +    V+ + ++
Sbjct: 257 VLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKEL 316

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
           V+ ++ G P     D+  +   + +  +Q L++DAL+ GA +L+        +G      
Sbjct: 317 VEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNK----RQGN---LL 368

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PT++ +V   M++  EE 
Sbjct: 369 SPTLLDDVTPAMRVAWEEP 387

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  254 bits (652), Expect = 3e-80
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 21/381 (5%)

Query: 59  TPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
           T  + T+     PAT + L   P  +  E++  ++ A    K W  +S  QR Q LR + 
Sbjct: 2   TMMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIG 61

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI 178
           + +  H E + +  +R+ GK +  A   E+  +     W    G   L PE         
Sbjct: 62  QALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVE---- 116

Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYF 235
           +++A +E+ PLGV+ AI+ WN+P   +     P+L A   GN  ++K + N +       
Sbjct: 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLA---GNSYLLKHAPNVTGCA---- 169

Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           ++I   LA  G P  +   +    E    +++   +  +   GS   G  I   A   L 
Sbjct: 170 QMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALK 229

Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
              LELGG D FIV +D D+    + AV    Q++GQ CA A+RF V   I   F  +  
Sbjct: 230 KCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV 289

Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
               ++  G PL  + D+G +   +  ++L   V  ++ +GA +L  G      EG    
Sbjct: 290 AAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEGN--- 345

Query: 414 YFPPTVIVNVNHTMKLMQEEI 434
           Y+  TV+ +V   M   ++E+
Sbjct: 346 YYAATVLADVTPDMTAFRQEL 366

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  253 bits (649), Expect = 1e-79
 Identities = 98/373 (26%), Positives = 157/373 (42%), Gaps = 31/373 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P +++ +   PALSR E  E +  A K ++V       +R   L  + K I E +E + +
Sbjct: 19  PYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHP 188
           I + D GK +  A   E+  +           +                  +       P
Sbjct: 79  ILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVK-------EHRDEVIPSDDRLIFTRREP 130

Query: 189 LGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 244
           +G+VGAI  +N+P     H I  P +A    GN IV   S  A        +II+ AL  
Sbjct: 131 VGIVGAITPFNFPLNLSAHKI-APAIAT---GNVIVHHPSSKAPLVCIELAKIIENALKK 186

Query: 245 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301
              P  + +++TG  E  G+ +V +  V+ I F GS  VG +I + A      + LELGG
Sbjct: 187 YNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGG 244

Query: 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361
            +  IV  D D+       ++ +   +GQ C       V   I   F+       K ++ 
Sbjct: 245 VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304

Query: 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 421
           G PL  K D+G L  +EH+E ++ +V  A+D+G ++L  G             F PT++ 
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL- 356

Query: 422 NVNHTMKLMQEEI 434
            V+    L + E 
Sbjct: 357 EVDRDNILCKTET 369

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  253 bits (648), Expect = 2e-79
 Identities = 99/379 (26%), Positives = 159/379 (41%), Gaps = 40/379 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P     +      +  ++++    A+KAQK WAKS+ + R+  L+    Y+ E+++ I  
Sbjct: 29  PYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIM 88

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-----HKKAKVE 185
           + +R+TG T++ +   E+  T   +   ++             G   +      K  K+ 
Sbjct: 89  MIARETGGTIIKS-TIELEQTIAILDEAMTYT-------GELGGVKEVPSDIEGKTNKIY 140

Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
             PLGV+ +I  +N+P +       P +A    GN +V K     + SG     II  A 
Sbjct: 141 RLPLGVISSISPFNFPMNLSMRSIAPAIAL---GNSVVHKPDIQTAISG---GTIIAKAF 194

Query: 243 AAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
              G P  +++V+     E G+ ++++     I F GS  VGR I   A +    + LEL
Sbjct: 195 EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALEL 254

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKI 355
           GG + F V  D DV      AV AA+       GQ C    R  VH+D+Y  FV +    
Sbjct: 255 GGNNPFAVLSDADV----DRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTAR 310

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
           VK +  G     K  +G L      EK   ++  A   G E+   G         V    
Sbjct: 311 VKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVL 363

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            P V V  ++  K+ Q E+
Sbjct: 364 TPYVFVGADNNSKIAQTEL 382

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  252 bits (647), Expect = 2e-79
 Identities = 85/369 (23%), Positives = 157/369 (42%), Gaps = 21/369 (5%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P T +    +   +  ++DE +  A    K W       R + L  +   + EH++ + +
Sbjct: 11  PYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAK 70

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
           + + + GK + ++   E+        +    G + LKP   +S        A       G
Sbjct: 71  MMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTG 125

Query: 191 VVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
           V+ A   WN+P + +     P       GN I++K + N   S     +II+ A    GA
Sbjct: 126 VIMACEPWNFPLYQVIRVFAPNFIV---GNPILLKHAHNVPGSAALTAKIIKRA----GA 178

Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 305
           PE  +  +    +    +++   +  +   GS   G  +   A K L   T+ELGG DAF
Sbjct: 179 PEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238

Query: 306 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365
           IV DD D   +  +   A   + GQ C  ++R  V +  Y   + ++  +  ++ AG PL
Sbjct: 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPL 298

Query: 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 425
                +  +   +  EKL+  V +A+D GA++  +      S+GA   +F PT++ ++  
Sbjct: 299 EADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYP-EIDSKGA---FFRPTILTDIAK 354

Query: 426 TMKLMQEEI 434
              +  +E+
Sbjct: 355 DNPVFDKEV 363

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  252 bits (647), Expect = 2e-79
 Identities = 80/374 (21%), Positives = 148/374 (39%), Gaps = 29/374 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P     +         +VD  V  AR+A   WA+   +QR + L      +    + +  
Sbjct: 27  PVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELAR 86

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWL--KPEYRSSGRSMIHKKAKVEFHP 188
           +   +TGK + ++   E+ +   K+   +    +    K    +   +++  K      P
Sbjct: 87  VIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHK------P 139

Query: 189 LGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
            GVV     +N+P H       P L A   GN +V K SE          +    A    
Sbjct: 140 HGVVAVFGPYNFPGHLPNGHIVPALLA---GNCVVFKPSELTPKVAELTLKAWIQA---- 192

Query: 246 GAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 302
           G P  +++++ G  ETG AL +   +D + F GS   G ++      +    + LE+GG 
Sbjct: 193 GLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGN 252

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSA 361
           +  +V +  D+       +++A  S+GQ C  A R  V +  +    ++++  +  ++  
Sbjct: 253 NPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRV 312

Query: 362 GPPLA-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
           G         MGA+  L  +E L       + KGA+ L   +     +GA      P ++
Sbjct: 313 GRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT--QPIDGA--ALLTPGIL 368

Query: 421 VNVNHTMKLMQEEI 434
            +V+   +   EE 
Sbjct: 369 -DVSAVAERPDEEF 381

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  252 bits (646), Expect = 3e-79
 Identities = 120/385 (31%), Positives = 179/385 (46%), Gaps = 34/385 (8%)

Query: 62  SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYI 121
           SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  +   +
Sbjct: 16  SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADIL 75

Query: 122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRS 176
           +  +E I  I S++  K    A + E++ T E I +   E     GE      + ++ + 
Sbjct: 76  MRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASK- 133

Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
              K A V   P+G+V AI  +NYP       I  P L A   GN I  K     S SG 
Sbjct: 134 --KKIAVVRREPVGLVLAISPFNYPVNLAGSKIA-PALIA---GNVIAFKPPTQGSISG- 186

Query: 233 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
               + +A   A G P  + + ITG   E G+ +V    V+ I F GS G+G  I + A 
Sbjct: 187 --LLLAEAFAEA-GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243

Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
             + P+ LELGGKD+ IV +D D+   A+  +  A   SGQ C   +R  V   +    V
Sbjct: 244 --MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 301

Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
            ++ + V +++ G P     D+  L   + ++ ++ L+NDA DKGA  L         EG
Sbjct: 302 EKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK----REG 356

Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEI 434
                  P +   V   M+L  EE 
Sbjct: 357 N---LICPILFDKVTTDMRLAWEEP 378

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  251 bits (644), Expect = 9e-79
 Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 28/388 (7%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLR 115
             P +   ++   PAT +Y+G  P  + A+VD  VA AR A     W  +   +R   + 
Sbjct: 18  TKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIA 77

Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSS 173
             +K + E ++L  ++ + +TG+          M +   + +     +K  W +    S 
Sbjct: 78  AAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSY 137

Query: 174 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWS 230
           G+S++ ++      P+GVVGAIV+WN P     N   P L A   G  IV+K +     +
Sbjct: 138 GQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLA---GCTIVLKPAAETPLT 188

Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
                 +        G PE ++ V+ G  ETG+AL S+  +D   F GS  VGR + R A
Sbjct: 189 ANALAEVFAEV----GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244

Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
           ++ L P TLELGGK A I+ +DVD+     + V + + ++GQ C    R    R  Y   
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLS 407
           V+ V   V ++  GPP      +G L   +   +++  +   +++GA ++  G     L 
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364

Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
            G    +F  PTV  +V++ M + QEEI
Sbjct: 365 NG----FFIQPTVFADVDNKMTIAQEEI 388

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  248 bits (635), Expect = 4e-77
 Identities = 108/391 (27%), Positives = 167/391 (42%), Gaps = 39/391 (9%)

Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
             + T  +   PAT + +    A + A V+  +A A++AQK WA  S   R + L+    
Sbjct: 26  DNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAAD 85

Query: 120 YIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH 179
            + E  + +  + + DTGK + +  + +  +  +   +            +     S ++
Sbjct: 86  IMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEF------------FGGIAPSALN 133

Query: 180 KK---AKVEFH-----PLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENA 227
                   +F      PLGV   I +WNYP   I      P L A   GN +V K SEN 
Sbjct: 134 GDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQ-QIACWKAAPALVA---GNAMVFKPSENT 189

Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285
                    I+  A    G P+ L +VI G  +TG  LV+   V K+   GS   GR + 
Sbjct: 190 PLGALKIAEILIEA----GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245

Query: 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 345
             A+  L  VT+ELGGK   IV DD D+      A+     SSGQ C+   R +V +   
Sbjct: 246 AAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAK 305

Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-- 403
           A F+  + +  +++  G PL     +G L      EK+ + +     +GA ++  G    
Sbjct: 306 ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPN 365

Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
               EGA   Y  PTV  +V   M + +EEI
Sbjct: 366 NVAGEGA---YVQPTVFADVTDDMTIAREEI 393

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  244 bits (625), Expect = 6e-76
 Identities = 94/394 (23%), Positives = 156/394 (39%), Gaps = 46/394 (11%)

Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLK 119
             +E +     P T   +      S A++D  V  A +A   W++++  +R      LLK
Sbjct: 36  AGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS---NALLK 92

Query: 120 Y---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWL 166
               I +  +    + + + GK +      E+                +           
Sbjct: 93  IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNL-----HAP--A 145

Query: 167 KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKV 223
             EY     SMI +       P+G+VG+I  WNYP   +     P +     GN +V K 
Sbjct: 146 AGEYLPGHTSMIRRD------PIGIVGSIAPWNYPLMMMAWKLAPAIGG---GNTVVFKP 196

Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGV 280
           SE    +     R+I   L     PE +V+VITG  ET G AL++   V  +   G    
Sbjct: 197 SEQTPLTALKLARLIADIL-----PEGVVNVITGRGETVGNALINHPKVGMVSITGDIAT 251

Query: 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV 340
           G+ ++  A+KT+    LELGGK   IV  D D+  V          ++GQ+C  A R Y 
Sbjct: 252 GKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYA 311

Query: 341 HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400
              IY   V+ +   V ++        + ++G L      +++ + V  A D+    +  
Sbjct: 312 EAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITT 371

Query: 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G      EG    +F PTV+       ++++ E+
Sbjct: 372 GGRTGSDEGF---FFQPTVVAGATQEDEIVRREV 402

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  243 bits (623), Expect = 7e-76
 Identities = 96/386 (24%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
               S   ++   PAT + +G     ++A+VD+ V  A      +  +S K+R+  L  +
Sbjct: 17  VESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKI 76

Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM 177
           +K     ++ I +  + + G  +  +                   + +   E R  G  +
Sbjct: 77  VKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR--GDDL 134

Query: 178 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFY 234
           + K+       +GV G I  WN+P +          AA   G+ +V+K SE   ++    
Sbjct: 135 VVKE------AIGVSGLITPWNFPTNQTSLKLAAAFAA---GSPVVLKPSEETPFAAVIL 185

Query: 235 FRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT 291
             I        G P+ + +++ G  A  G  L     V  + F GS   G  IM  A+K 
Sbjct: 186 AEIFDKV----GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241

Query: 292 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351
              V+LELGGK  +IV DDVD+   A+      + ++GQ C    R  V   I   F+++
Sbjct: 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAE 301

Query: 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEG 409
           + +    V  G P      +G +   +  +++QN +N  +++GAE+   G      L +G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG 361

Query: 410 AVDQYF-PPTVIVNVNHTMKLMQEEI 434
               YF  PT+ +NV++ M + QEEI
Sbjct: 362 ----YFARPTIFINVDNQMTIAQEEI 383

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  243 bits (622), Expect = 2e-75
 Identities = 104/407 (25%), Positives = 160/407 (39%), Gaps = 55/407 (13%)

Query: 50  FI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSS 106
            I    +   G           Y PAT   L      S  +VD  V  A  A   W +++
Sbjct: 27  LINGELVSGEGEK------QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTT 80

Query: 107 FKQRRQFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTT----------CE 153
            K R      LLK    I E+ ++  E+ SR+ GK +  A   EI               
Sbjct: 81  PKVRA---ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAAR 137

Query: 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPML 210
            +      G      EY     SMI +       PLGVV +I  WNYP         P L
Sbjct: 138 CL-----NGL--AAGEYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPAL 184

Query: 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS-- 267
           AA   GN +V+K SE    +      + +        P  +V+++ G  +T G+ L    
Sbjct: 185 AA---GNCVVLKPSEITPLTALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHP 236

Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
            V  +   GS   G  I+ + + ++    +ELGGK   IV DD D+  V +        +
Sbjct: 237 KVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYN 296

Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           +GQ+C  A R Y  + IY   V ++   V ++ +G P     ++G L  L H E++   V
Sbjct: 297 AGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAV 356

Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            +A   G   +  G       G    Y+ PT++        ++Q+E+
Sbjct: 357 EEAKATGHIKVITGGEKRKGNGY---YYAPTLLAGALQDDAIVQKEV 400

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  242 bits (621), Expect = 2e-75
 Identities = 85/380 (22%), Positives = 148/380 (38%), Gaps = 38/380 (10%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELIC 129
           P  +  +    + SR EV+  +    K  +         +R   LR     I  + ++  
Sbjct: 39  PIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFA 98

Query: 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKW------LKPEYRSSGRSMIHKKAK 183
           E+   + GK    A +GE+    +++     + +K           Y +     + ++  
Sbjct: 99  EVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRR-- 155

Query: 184 VEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 239
               PLGVV AI  +NYP     + I          GN +V+K S +         + + 
Sbjct: 156 ---EPLGVVAAITPFNYPLFDAVNKIT-YSFIY---GNAVVVKPSISDPLPAAMAVKALL 208

Query: 240 AALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 297
            A    G P + + ++    +  E +V+   V  + F GS  VG  +++     +    +
Sbjct: 209 DA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG--GVKQYVM 262

Query: 298 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357
           ELGG D  IV +D D+   A    R     +GQ C   +     R +Y   V +VAK + 
Sbjct: 263 ELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 322

Query: 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 417
           S+  G P     D+G L      +++   + DA++KG  +LA G       G    Y  P
Sbjct: 323 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR----RLGP--TYVQP 376

Query: 418 TVI---VNVNHTMKLMQEEI 434
           T +    +    M L + E+
Sbjct: 377 TFVEAPADRVKDMVLYKREV 396

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  241 bits (618), Expect = 8e-75
 Identities = 112/384 (29%), Positives = 171/384 (44%), Gaps = 41/384 (10%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           +EPAT + L         EVD+ V  A+ A   W+K +  +R + +    + I E ++ I
Sbjct: 41  FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100

Query: 129 CEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSGRSMI 178
            ++   + GKT+ +A   +I                +      G+       +  G +  
Sbjct: 101 AKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTL-----SGQ-----HIQLPGGAF- 148

Query: 179 HKKAKVEFHPLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFY 234
              A     PLGV   I++WNYPF  I      P LA    GN +V K S     +G   
Sbjct: 149 ---AYTRREPLGVCAGILAWNYPF-MIAAWKCAPALAC---GNAVVFKPSPMTPVTGVIL 201

Query: 235 FRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL 292
             I   A    G P  LV+V+ G AETG  L    +V K+ F GS   G+ +M  ++KT+
Sbjct: 202 AEIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257

Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
             VTLELGGK   ++  D ++ +  + A+ A   + GQ C    R +V R+I   F+ +V
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317

Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
            K  K++  G PL  +  MG L      +K+   V  A  +GA +L  G     S+  + 
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377

Query: 413 Q-YF-PPTVIVNVNHTMKLMQEEI 434
             YF  P V+ N    M  ++EEI
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEI 401

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  238 bits (611), Expect = 8e-74
 Identities = 116/398 (29%), Positives = 185/398 (46%), Gaps = 45/398 (11%)

Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-----QKVWAKSSFKQRRQFL 114
           P    ++    PAT   +G  PA ++ +VD  VA A+ A        WA +S   R ++L
Sbjct: 19  PVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYL 78

Query: 115 RILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEK 164
           R +   + E +  + ++ S D GK + +A   +I              EK+     +   
Sbjct: 79  RAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKL-----DAR- 131

Query: 165 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVI 221
               +       M   K+ V   P+GVVG I  WNYP         P LAA   G   ++
Sbjct: 132 ----QKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAA---GCAAIL 184

Query: 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSP 278
           K SE AS +      I +      G P  +++++TG   E G  L +   VDK+ F GS 
Sbjct: 185 KPSELASLTCLELGEICKEV----GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS 240

Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 338
             G  IM  A++ + PV+LELGGK   +V +DVD+   A+ A+     ++GQ C+   R 
Sbjct: 241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300

Query: 339 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 398
            +H  I   F++++ K +K++    PL     +G +      EK+   V++A  +GA IL
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360

Query: 399 ARGS-FGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
             GS   HL +G    +F  PT+I +V   M++ +EE+
Sbjct: 361 TGGSRPEHLKKG----FFIEPTIITDVTTNMQIWREEV 394

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  237 bits (607), Expect = 3e-73
 Identities = 99/388 (25%), Positives = 171/388 (44%), Gaps = 29/388 (7%)

Query: 58  RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRIL 117
             P +   +   +P+T +        S  + D+ +  A+KA + W  +S  +R  F+  +
Sbjct: 35  DDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKI 94

Query: 118 LKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYRSSGR 175
           L+   +    + +  S + G  +  A   +  T    I   +   ++  + +     + +
Sbjct: 95  LEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQ 154

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGC 232
           +++H         +GVVG I  WN+P + +     P L A   G  +V+K SE A  S  
Sbjct: 155 AILHYD------AIGVVGLITPWNWPMNQVTLKVIPALLA---GCTMVLKPSEIAPLSAM 205

Query: 233 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
            +  I+  A      P  + ++I G  A  G  L +   ++ I F GS   G+ I +NAS
Sbjct: 206 LFAEILDEA----ALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261

Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
            TL  V LELGGK A I+  D D+  + +  VR    +SGQ+C    R  V + IY   +
Sbjct: 262 NTLKRVCLELGGKGANIIFADADIDALQR-GVRHCFYNSGQSCNAPTRMLVEQAIYDKAI 320

Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA--RGSFGHLS 407
                I +    GP       +G +   E  +K+Q+L+   +D+GA ++    G    + 
Sbjct: 321 KTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGME 380

Query: 408 EGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
            G    Y+  PTV  +V   M++ +EEI
Sbjct: 381 RG----YYVRPTVFADVKPHMRIFREEI 404

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  236 bits (605), Expect = 7e-73
 Identities = 85/389 (21%), Positives = 157/389 (40%), Gaps = 28/389 (7%)

Query: 57  GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
           G        +  Y PA  + +      S A+ +E V +AR+A K+WA     +R + +R 
Sbjct: 30  GSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQ 89

Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
           +   + E  +++  + S + GK +V+  +GE+    +   + +              G  
Sbjct: 90  IGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSR-------MIGGPI 141

Query: 177 M----IHKKAKVEFHPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSG 231
           +           +++P+G+VG I ++N+P      N  +A +  GN  + K +   S   
Sbjct: 142 LPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI-CGNVCLWKGAPTTSLIS 200

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
               +II   L     P  +  +  G A+ G A+     V+ + F GS  VG+ +     
Sbjct: 201 VAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ 260

Query: 290 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIY 345
           +      LELGG +A I  +D D+     + V +AL +    +GQ C  A R ++H  I+
Sbjct: 261 ERFGRSLLELGGNNAIIAFEDADL----SLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316

Query: 346 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 405
              V+++ K    +  G P       G L   +        V +A  +G  ++  G    
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG--KV 374

Query: 406 LSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           +       Y  PT++  + H   +   E 
Sbjct: 375 MDRPG--NYVEPTIVTGLGHDASIAHTET 401

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  232 bits (594), Expect = 2e-71
 Identities = 110/381 (28%), Positives = 167/381 (43%), Gaps = 42/381 (11%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT   +   P     +  + +  A +AQ  W      +R  +LR +   I E    I  
Sbjct: 29  PATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISA 88

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
           +   + GK    A   E+  T + I ++        GE  +    R     ++ K+    
Sbjct: 89  LIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGE--IIQSDRPGENILLFKR---- 141

Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
              LGV   I+ WN+PF  I     P L     GN IVIK SE    +      I  A +
Sbjct: 142 --ALGVTTGILPWNFPFFLIARKMAPALLT---GNTIVIKPSEFTPNNA-----IAFAKI 191

Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
              +G P  + +++ G     G+ L  +  V  +   GS   G  IM  A+K +T V LE
Sbjct: 192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLE 251

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAK 354
           LGGK   IV DD D+      AV+A + S    SGQ C  AER YV + IY  FV+++ +
Sbjct: 252 LGGKAPAIVMDDADLEL----AVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 307

Query: 355 IVKSVSAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
            +++V  G P       MG L      E+++  V  A+++GA +   G      +G    
Sbjct: 308 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK-AVEGKG---Y 363

Query: 414 YFPPTVIVNVNHTMKLMQEEI 434
           Y+PPT++++V   M +M EE 
Sbjct: 364 YYPPTLLLDVRQEMSIMHEET 384

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  233 bits (596), Expect = 2e-71
 Identities = 95/416 (22%), Positives = 173/416 (41%), Gaps = 46/416 (11%)

Query: 44  QTPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQAR 96
           Q+     +    +            ++       P   + +      ++ + +  +  AR
Sbjct: 21  QSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAAR 80

Query: 97  KAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT--- 151
           +A +   W++ + + R + +R +   I EH+E +  + + DTGKT+ ++   ++      
Sbjct: 81  RAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNV 139

Query: 152 -------CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204
                   +K       G              +   ++K+   P+GVV  I  WNYP   
Sbjct: 140 FMYFAGLADKD-----GG--------EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQ 186

Query: 205 IF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AE 260
                 P LA    G  +V+K SE    +    F +++      G P+  +++I G  +E
Sbjct: 187 ASWKIAPALAT---GCSLVMKPSEITPLTTIRVFELMEEV----GFPKGTINLILGAGSE 239

Query: 261 TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 318
            G+ +     VD + F G    G+ IM+NA+  +T + LELGGK+  I+ DD D      
Sbjct: 240 VGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVD 299

Query: 319 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 378
            A+      +GQ C+   R  V   I   F   +   VK +  G       +MG +   E
Sbjct: 300 QALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359

Query: 379 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           H  K+++ ++ A  +GA I   G      +     +F PTVI N + +M+++QEE+
Sbjct: 360 HRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEV 415

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  233 bits (596), Expect = 2e-71
 Identities = 85/392 (21%), Positives = 168/392 (42%), Gaps = 31/392 (7%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G    +E K+Q + PA   + +G     ++   ++ +  A +A + W   + ++R     
Sbjct: 44  GERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA---N 100

Query: 116 ILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS 172
           IL+K    I   +         + GK   +A   +     + + +   +  +  + +   
Sbjct: 101 ILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEIL 159

Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 232
           S      ++ +  + P+GV   I  WN+    +    +A + +GN +V+K +        
Sbjct: 160 SRPG---EQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216

Query: 233 FYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS 289
            +  +++ A    G P+ +++ + G     G+ LV       I F GS  VG  +   A+
Sbjct: 217 KFVEVLEDA----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272

Query: 290 K------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
                   L  V +E+GGKD  +V  D D+   A+  + +A   SGQ C+   R  +H+D
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           +Y   + +   + K+++ G P      MG +   +  EK+ + +     +G  ++  G  
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE- 390

Query: 404 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
           G  S G    +F  PT+I +++    +MQEEI
Sbjct: 391 GDSSTG----FFIQPTIIADLDPEAVIMQEEI 418

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  229 bits (586), Expect = 5e-70
 Identities = 94/376 (25%), Positives = 160/376 (42%), Gaps = 20/376 (5%)

Query: 68  CYEPATMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQ 125
              P     +        ++VD+ VA A++A    +W K + + R + L  L   + +HQ
Sbjct: 56  TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115

Query: 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE 185
           E +  I + D G     A    +  + +   +     +K        +           +
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175

Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
             P+GV G ++ WNYP   +       LAA   GN +VIK ++    +   +  +   A 
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA---GNTVVIKPAQVTPLTALKFAELTLKA- 231

Query: 243 AAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLE 298
              G P+ +V+++ G     G+ L     V KI F GS  VG+ IM++ +   +  V+LE
Sbjct: 232 ---GIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLE 288

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   I+  D D+    Q+ + +   + G+NC  A R +V   I+  FV +V + V+ 
Sbjct: 289 LGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEK 348

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
           +  G PL    + G      H  KL       + +GA ++  G+      G    +F PT
Sbjct: 349 MKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGF---FFQPT 404

Query: 419 VIVNVNHTMKLMQEEI 434
           V  +V   M + +EE 
Sbjct: 405 VFTDVEDHMYIAKEES 420

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  228 bits (583), Expect = 9e-70
 Identities = 104/407 (25%), Positives = 168/407 (41%), Gaps = 32/407 (7%)

Query: 45  TPDNSFIYIPPRG-------RTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARK 97
               + +              +  S  K   + PAT + L       + +VD+ V  AR+
Sbjct: 10  PAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQ 69

Query: 98  A---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 154
           A      W      +R + L  L   I   + L+  + + + GK   +A L ++    + 
Sbjct: 70  AFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKT 129

Query: 155 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLA 211
           + +     +K         G             P+GV G I+ WN+P         P L+
Sbjct: 130 LRYCAGWADKIQGRTIPMDGNFF----TYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALS 185

Query: 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS-- 268
               GN +V+K +E    +      +I+ A    G P  +V+++ G+  T G A+ S   
Sbjct: 186 C---GNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMD 238

Query: 269 VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
           VDK+ F GS  VG++I   A K+ L  V+LELGGK   IV  D D+ +  + A +     
Sbjct: 239 VDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYH 298

Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
            GQ C  A R +V   IY  FV +  +  K    G PL      G     E  EK+ +L+
Sbjct: 299 QGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLI 358

Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                +GA++   G     ++G    +  PTV  +V   M++ +EEI
Sbjct: 359 ESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRIAKEEI 401

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  227 bits (580), Expect = 3e-69
 Identities = 103/385 (26%), Positives = 160/385 (41%), Gaps = 25/385 (6%)

Query: 60  PQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA---QKVWAKSSFKQRRQFLRI 116
             S        P+T + +       + +VD+ V  AR A      W +     R + L  
Sbjct: 31  AVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNR 90

Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS 176
           L   I   +  +  + + D GK  V + L ++    + + +     +K+        G  
Sbjct: 91  LADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDF 150

Query: 177 MIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCF 233
                +     P+GV G I+ WN+P         P LA    GN +V+KV+E    +  +
Sbjct: 151 F----SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT---GNVVVMKVAEQTPLTALY 203

Query: 234 YFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK 290
              +I+ A    G P  +V+++ GF  T G A+ S   VDK+ F GS  +GR+I   A  
Sbjct: 204 VANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259

Query: 291 T-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 349
           + L  VTLELGGK   I+  D D+    + A  A   + GQ      R +V  DIY  FV
Sbjct: 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFV 319

Query: 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 409
            +     KS   G P   K + G        +K+   +N    +GA++L  G       G
Sbjct: 320 ERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRG 378

Query: 410 AVDQYFPPTVIVNVNHTMKLMQEEI 434
               +  PTV  +V   M + +EEI
Sbjct: 379 Y---FIQPTVFGDVQDGMTIAKEEI 400

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  227 bits (582), Expect = 3e-69
 Identities = 104/386 (26%), Positives = 163/386 (42%), Gaps = 43/386 (11%)

Query: 68  CYEPA-TMKYLGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEH 124
              P    + +G +P  S  +V + VA ARKA     W + S  +R + +  +   I+  
Sbjct: 42  RVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101

Query: 125 QELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKPEYRSSG 174
           QE +  I S + GK +  A  GEI                +     EG+           
Sbjct: 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARAL-----EGQ--THNNIGDDR 153

Query: 175 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSG 231
             ++ ++      P+GVVG I  WN+PF          + +   G  +V+K SE  S + 
Sbjct: 154 LGLVLRE------PVGVVGIITPWNFPFIIASERVPWAIGS---GCTVVLKPSEFTSGTS 204

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
                + + A    G P+ + +V+TG+    G+ L     VD + F GS  VG  +   A
Sbjct: 205 IRLAELAREA----GIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260

Query: 289 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 348
           ++T+  V LELGGK   IV  D D+   A         ++GQ C    R  V   I    
Sbjct: 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320

Query: 349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 408
           + ++  I + V+ G PL  +  +GA+    H+EK+ + V   +  GAE+L  G       
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREA 380

Query: 409 GAVDQYFPPTVIVNVNHTMKLMQEEI 434
           G    Y+ PTV   V   M + +EEI
Sbjct: 381 G---LYYAPTVFAGVTPDMSIAREEI 403

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  227 bits (582), Expect = 3e-69
 Identities = 60/413 (14%), Positives = 128/413 (30%), Gaps = 45/413 (10%)

Query: 49  SFI---YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKS 105
           + +   +I   G        +   +P T   L    +                       
Sbjct: 10  NHVAGQWIAGTGAG------ITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63

Query: 106 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK- 164
           ++ QR   L  ++K +   +     I++ ++G T  D+   +I      +++    G   
Sbjct: 64  TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASL 122

Query: 165 -----WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSG 216
                       S  +        V     GV   I ++N+P   +     P L +   G
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLS---G 179

Query: 217 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIF 274
             +++K +   +W      R++   + A   P   + +I G +     L    S D + F
Sbjct: 180 VPVIVKPATATAWLT---QRMVADVVDAGILPPGALSIICGSS--AGLLDQIRSFDVVSF 234

Query: 275 VGSPGVGRMIMRNASKT--LTPVTLELGGKDAFIVCDDVDVPHV-----AQIAVRAALQS 327
            GS      +  + +       + ++    ++ I+C D            +  VR     
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294

Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           SGQ C    R +V        +  +   +  ++ G P      MG+L   E  E +   +
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGI 354

Query: 388 NDALDKGAEILARGSF----GHLSEGAVDQYFPPTV--IVNVNHTMKLMQEEI 434
               ++        +        +  A      P +  + + ++   L   E+
Sbjct: 355 AALREEAVLAYDSSAVPLIDADANIAA---CVAPHLFVVNDPDNATLLHDVEV 404

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  226 bits (579), Expect = 6e-69
 Identities = 101/387 (26%), Positives = 166/387 (42%), Gaps = 42/387 (10%)

Query: 68  CYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY---IIEH 124
             +PAT + LG        EVD     A +A + W+++  K+R+   R LL+    I +H
Sbjct: 46  SLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK---RYLLRIAELIEKH 102

Query: 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKV 184
            + +  +   D G+ +      ++    E   +     E  +        R+    +  +
Sbjct: 103 ADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAM------EDRTFPVDRDWL 155

Query: 185 EFH---PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238
            +    P G VG I  WN P         P LA    GN +V+K +E + ++      I+
Sbjct: 156 YYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAF---GNTVVLKPAEWSPFTATKLAEIL 212

Query: 239 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 295
           + A      P  + +++ GF  E G ALV+   V  +   G    G+++MRNA+  L  +
Sbjct: 213 KEA----DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRL 268

Query: 296 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 355
           + ELGGK   +V  D D+       V      +G+ C  + R  V   I+  FV +V + 
Sbjct: 269 SPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVER 328

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-------SFGHLSE 408
            +++  G PL  + ++G L   EH +++   V     +GA +L  G           LS 
Sbjct: 329 ARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSR 388

Query: 409 GAVDQYF-PPTVIVNVNHTMKLMQEEI 434
           G     +  PTV V  NH MK+ QEEI
Sbjct: 389 G----NYLLPTVFVGENH-MKIAQEEI 410

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  223 bits (571), Expect = 5e-68
 Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 29/376 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           P+T K +G  PA  +A+ +  +  A+ AQK WAK + + R+  LR     I E++ ++  
Sbjct: 35  PSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAP 94

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVE 185
           +   + GK +  A   E+  T   I +         G+  + P      +  IHK     
Sbjct: 95  MLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIEGD--ILPSDNQDEKIYIHKV---- 147

Query: 186 FHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242
             P GVV  I +WN+P         P L     GN +V+K ++    +           +
Sbjct: 148 --PRGVVVGITAWNFPLALAGRKIGPALIT---GNTMVLKPTQETPLAT-----TELGRI 197

Query: 243 AA-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 298
           A   G P+ +++VI G     G+ L  S     I   GS   G+ I + +++ +TPV LE
Sbjct: 198 AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLE 257

Query: 299 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358
           LGGK   +V DD D+   A+ A+     + GQ C   ER YVH  +Y  F+++   +VK 
Sbjct: 258 LGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKG 317

Query: 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 418
           +  G P+     MG  C     + + ++V++A+ +GA +   G    +       ++ PT
Sbjct: 318 LKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPT 377

Query: 419 VIVNVNHTMKLMQEEI 434
           V+V+V     ++ EE 
Sbjct: 378 VLVDVKQDNIVVHEET 393

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  219 bits (561), Expect = 9e-67
 Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 17/350 (4%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 145
           +++ E V +AR A         + R Q L  L + I E ++ +    + D  K   +A  
Sbjct: 18  SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77

Query: 146 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205
            E++   E+I +++ +  +W   E           +  +   PLGVV  I +WNYPF+  
Sbjct: 78  EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137

Query: 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 265
             PM+ A+ +GN +V+K SE +         II   L      ++L  VI G       L
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL-----DKDLYPVINGGVPETTEL 192

Query: 266 VSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 324
           +    D I++ GS GVG++IM  A+K LTPVTLELGGK    V  + D+    +      
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252

Query: 325 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 384
             +SGQ C   +       I    V ++ K +K          + D G +    H +++ 
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHFQRVM 311

Query: 385 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
            L+     +G ++   G+       A  +Y  PT++ +V+    +MQEEI
Sbjct: 312 GLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEI 351

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  220 bits (562), Expect = 2e-66
 Identities = 93/392 (23%), Positives = 152/392 (38%), Gaps = 31/392 (7%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G    ++ ++    P+   + +G      +AE +  +  A KA K W     + R + L 
Sbjct: 44  GEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLL 103

Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
                +   +  +      + GK  V+A   ++    E I ++        ++  P    
Sbjct: 104 KAAALMRRRKRELEATLVYEVGKNWVEA-SADV---AEAIDFIEYYARAALRYRYPAVEV 159

Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML-AAVFSGNGIVIKVSENASWSG 231
                     +  + PLG    I  WN+P   IF  M+   V  GN ++ K +E+A   G
Sbjct: 160 VPYPGED--NESFYVPLGAGVVIAPWNFPV-AIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA 288
              F I   A    G P  +V+ + G  E  G  LV    +  I F GS  VG  I   A
Sbjct: 217 AKVFEIFHEA----GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272

Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
            +            +E GGK+A IV +  D    A+  V +A    GQ C+ A R  + +
Sbjct: 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ 332

Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
             Y   + +V K  + +S GP      D+G +   E   K+ + +    ++G  +L    
Sbjct: 333 GAYEPVLERVLKRAERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKR 391

Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                EG    +  PTV   V    ++ QEEI
Sbjct: 392 LE--GEGY---FIAPTVFTEVPPKARIAQEEI 418

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  215 bits (549), Expect = 3e-65
 Identities = 91/352 (25%), Positives = 145/352 (41%), Gaps = 19/352 (5%)

Query: 84  SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143
           S A++D   +  +      A +    R+Q L  L + +I ++E +    + D GK     
Sbjct: 26  SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85

Query: 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 203
            L EI     +I + L+  ++W+ P    S   +   +  V   P GV   I  +NYP +
Sbjct: 86  DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVN 145

Query: 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 263
               P++ A+  GN  +IK SE    +     +II  A          V VI G  +   
Sbjct: 146 LTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-----APEYVAVIQGGRDENS 200

Query: 264 ALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 322
            L+S   D I F GSP VG+++M+ A+K LTPV LELGGK   IV  D D+       + 
Sbjct: 201 HLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMF 260

Query: 323 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382
               +SGQ     +  YVH  +    + ++ + VK+             G L      ++
Sbjct: 261 GKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQVQR 315

Query: 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           L +L+        ++L              +    TV+  V     LM EE+
Sbjct: 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEEL 359

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  212 bits (543), Expect = 4e-64
 Identities = 110/375 (29%), Positives = 170/375 (45%), Gaps = 31/375 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA    LG  P +   E    +  A +A   W   + K+R   LR     ++EHQ+ +  
Sbjct: 32  PANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLAR 91

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           + + + GK + +A  GEI      I W   EG+       R  G         K+  V  
Sbjct: 92  LMTLEQGKPLAEA-KGEISYAASFIEWFAEEGK-------RIYGDTIPGHQADKRLIVIK 143

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GV  AI  WN+P   I     P LAA   G  +V+K +    +S      +  A LA
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAA---GCTMVLKPASQTPFSA-----LALAELA 195

Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
              G P  + +V+TG A   G  L S+  V K+ F GS  +GR +M   +K +  V+LEL
Sbjct: 196 IRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+    + A+ +  +++GQ C  A R YV   +Y  F  ++ + +  +
Sbjct: 256 GGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKL 315

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G  L     +G L   +   K++  + DAL+KGA ++  G            +F PT+
Sbjct: 316 HIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGG----NFFQPTI 371

Query: 420 IVNVNHTMKLMQEEI 434
           +V+V    K+ +EE 
Sbjct: 372 LVDVPANAKVSKEET 386

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  213 bits (544), Expect = 5e-64
 Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 30/375 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT   +   P++   +V   V   + A ++      + RR++L  +   + E++E I  
Sbjct: 34  PATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGR 93

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           I   + GK   +A  GE+        +                              V +
Sbjct: 94  ILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHIS-------ALDSHTIPEKPKDCTWTVHY 145

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GV G IV WN+P   I    +  LAA   G   VIK +     +      I   ++ 
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAA---GCPSVIKPASETPLTM-----IAFFSVM 197

Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
             +  P+ +V+++ G A   G+ L     V  + F GS  VGR ++ + ++ +  + LEL
Sbjct: 198 DKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+   A   +    +  GQ C  A R +VH  +   F  ++A+ V  +
Sbjct: 258 GGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKM 317

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
           + G  +    D+G L   +  +K++  + DALDKGA ++A      L +G    +FPPTV
Sbjct: 318 TVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG---LFFPPTV 374

Query: 420 IVNVNHTMKLMQEEI 434
           +  V+  M   QEE 
Sbjct: 375 VQGVDREMCCYQEET 389

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  211 bits (539), Expect = 2e-63
 Identities = 113/375 (30%), Positives = 175/375 (46%), Gaps = 31/375 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PAT + LG  P +  AE    +  A+ A   W   + K+R   LR     +I + + +  
Sbjct: 35  PATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLAL 94

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           I + + GK + +A  GEI      I W   EG+       R +G        +K+  V  
Sbjct: 95  ILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVK 146

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GV  AI  WN+P   I     P LAA   G  IV+K +E+  +S      +  A LA
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAA---GCPIVVKPAESTPFSA-----LAMAFLA 198

Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
              G P+ ++ V+ G     G  + S+  V K+ F GS  VGR++M  ++ T+  +TLEL
Sbjct: 199 ERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+    + A+ +  +++GQ C    RF+VH  +Y  F  ++A  V  +
Sbjct: 259 GGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL 318

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G        +G L      +K+++ + DAL KGA ++  G    L       +F PTV
Sbjct: 319 KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGH----GFFEPTV 374

Query: 420 IVNVNHTMKLMQEEI 434
           +  V   M + +EE 
Sbjct: 375 LTGVKPDMDVAKEET 389

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  208 bits (532), Expect = 3e-62
 Identities = 107/375 (28%), Positives = 172/375 (45%), Gaps = 33/375 (8%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA    +G  P+LS A + E +  + KA   WA  + K+R   LR     II + + I  
Sbjct: 55  PADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIAL 114

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           I + + GK + +A  GE++     I W   E +       R  G         ++  V  
Sbjct: 115 IMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAK-------RVYGDTIPAPQNGQRLTVIR 166

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GV  AI  WN+P   I     P LAA   G  ++++ ++    +      +    LA
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAA---GCTMIVRPADLTPLTA-----LALGVLA 218

Query: 244 A-VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
              G P  ++ ++TG A E G  L S+  V K+ F GS  VGR++M   + T+  ++LEL
Sbjct: 219 EKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278

Query: 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359
           GG   FIV DD D+      A+ +  +++GQ C  A R YV R +Y  F  ++A  VK +
Sbjct: 279 GGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKEL 338

Query: 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 419
             G        +G +   +   K++  + DA+ KGA+++  G       G    +F P +
Sbjct: 339 KVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK----ELGG--LFFEPGI 392

Query: 420 IVNVNHTMKLMQEEI 434
           +  V   M + +EE 
Sbjct: 393 LTGVTSDMLVAKEET 407

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  207 bits (530), Expect = 4e-62
 Identities = 106/379 (27%), Positives = 171/379 (45%), Gaps = 35/379 (9%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
           PA+   LG        E    V  A +A   W + S K+R   LR     +I++++ +  
Sbjct: 33  PASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLAR 92

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEF 186
           I + ++GK + +A  GEI+ +   + W   E         R  G         ++A V  
Sbjct: 93  IITAESGKPLKEA-HGEILYSAFFLEWFSEEAR-------RVYGDIIHTPAKDRRALVLK 144

Query: 187 HPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 243
            P+GV   I  WN+P   I       LAA   G  +V+K +E+  +S      +  A LA
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAA---GCTVVVKPAEDTPFSA-----LALAELA 196

Query: 244 A-VGAPENLVDVITGF----AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 296
           +  G P  + +VI        E GEA+ +   V KI F GS   G++++ +A+ ++  V+
Sbjct: 197 SQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256

Query: 297 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ-VAKI 355
           +ELGG   FIV D  +V      A+ +  +++GQ C  + +F V R I+  FV      +
Sbjct: 257 MELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAM 316

Query: 356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 415
            K++  G         G L   +  EK++  VNDA+ KGA ++  G    L +     +F
Sbjct: 317 KKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK----NFF 372

Query: 416 PPTVIVNVNHTMKLMQEEI 434
            PT++ NV   M    EE 
Sbjct: 373 EPTLLCNVTQDMLCTHEET 391

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  203 bits (519), Expect = 1e-57
 Identities = 86/392 (21%), Positives = 150/392 (38%), Gaps = 31/392 (7%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
           G+  ++   +    P    + LG        EV + +A A+ A   W  +  + R ++L 
Sbjct: 538 GKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLL 597

Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL---SEGEKWLKPEYRS 172
              +   +    +      + GK    A   ++    E I +L     E  +  +P+   
Sbjct: 598 KAAQAARKRLFELSAWQVLEIGKQWDQA-YADV---TEAIDFLEYYAREMIRLGQPQRVG 653

Query: 173 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN-PMLAAVFSGNGIVIKVSENASWSG 231
                  +     + P GV   I  WN+P   I      AA+ +GN +V K S   S  G
Sbjct: 654 HAPG---ELNHYFYEPKGVAAVIAPWNFPL-AISMGMASAAIVTGNCVVFKPSGITSIIG 709

Query: 232 CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA 288
                + + A    G PE + +   G  +  G+ LV    +  I F GS   G  I+  A
Sbjct: 710 WHLVELFREA----GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765

Query: 289 SKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
           +K       +  +  E+GGK+A I+ DD D+       + +A    GQ C+   R  V  
Sbjct: 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD 825

Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
            +Y  F+ ++  + K+   GP       MGA+   +  + ++        +G  +     
Sbjct: 826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPV 885

Query: 403 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                EG    + P T+I  +    ++ QEEI
Sbjct: 886 --PAGEG---YFVPMTIIGGIKPEHRIAQEEI 912

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  195 bits (498), Expect = 3e-57
 Identities = 66/399 (16%), Positives = 128/399 (32%), Gaps = 47/399 (11%)

Query: 60  PQSETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL 118
           PQ++         T + L   FP  +  EV++    A K  + + + +  +R   LR + 
Sbjct: 3   PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIA 62

Query: 119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTT----------CEKITWLLSEGEKWLKP 168
             +    + I   +  +T    V  + GEI  T              ++  +  +    P
Sbjct: 63  SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPN-P 120

Query: 169 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKV 223
                 +  I      +   LG V    + N+P             LAA   G  +++K 
Sbjct: 121 TRAPLPKPDIR----RQQIALGPVAVFGASNFPLAFSAAGGDTASALAA---GCPVIVKG 173

Query: 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGV 280
                 +       I+ AL     P+ +  ++ G     G+ALVS   +  + F GS G 
Sbjct: 174 HTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGG 233

Query: 281 GRMIMRNASKTLTPVT--LELGGKDAFIVCDDVDV--PHVAQIAVRAALQSSGQNCAGAE 336
           GR +   A +   P+    ELG  +   +          +A   V +     GQ C    
Sbjct: 234 GRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPG 293

Query: 337 RFYVHRDIYA-LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395
             +         F+     +++  S          +       +  ++ +      D G 
Sbjct: 294 VVFALNTPETQAFIETAQSLIRQQSPST------LLTPGIRDSYQSQVVSR---GSDDGI 344

Query: 396 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++    +       A+  +   +     +      +EEI
Sbjct: 345 DVTFSQAESPCVASAL--FVTSSENWRKHP---AWEEEI 378

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  181 bits (462), Expect = 2e-52
 Identities = 58/354 (16%), Positives = 119/354 (33%), Gaps = 23/354 (6%)

Query: 83  LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVD 142
            S  EV   +  A KAQK  A  S +Q    ++ +       +E + +++  +TG  +  
Sbjct: 9   RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68

Query: 143 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202
             + + +   + +   + + +     +  +  + M          PLGVV  ++    P 
Sbjct: 69  DKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAV------PLGVVAGLIPSTNPT 122

Query: 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 261
             +    L ++ +GN IV     NA  +     RII  A    G P+  +  +T    + 
Sbjct: 123 STVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQG 182

Query: 262 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
            + L+       I+  G   + +    +     TP      G     +    ++P   + 
Sbjct: 183 TDQLMKHKDTAVILATGGSAMVKAAYSSG----TPAIGVGPGNGPAFIERSANIPRAVKH 238

Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
            + +    +G  CA  +   V R         +A+  K  +     A    +G   L  +
Sbjct: 239 ILDSKTFDNGTICASEQSVVVERVNKEAV---IAEFRKQGAHFLSDAEAVQLGKFILRPN 295

Query: 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 433
                 +V  ++   A +        +   A       T    V   +   +E+
Sbjct: 296 GSMNPAIVGKSVQHIANLAGLT----VPADARVLIAEET---KVGAKIPYSREK 342

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  187 bits (476), Expect = 4e-52
 Identities = 81/372 (21%), Positives = 137/372 (36%), Gaps = 27/372 (7%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
            A    L      +  +    VA AR     W+++    R   L      +         
Sbjct: 535 KAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIA 594

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKPEYRSSGRSMIHKKAKVEFH 187
           +  R+ GKT+ DA L E+    E   +     ++G K    E    G +       +   
Sbjct: 595 LLQREGGKTLDDA-LSEL---REAADFCRYYAAQGRKLFGSETAMPGPTGESNA--LTMR 648

Query: 188 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 247
             GV  AI  WN+P       + AA+ +GN +V K +E           ++  A    G 
Sbjct: 649 GRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA----GI 704

Query: 248 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGK 302
           P++ + ++TG    G AL +   +  ++F GS  V R I R  +     + P+  E GG 
Sbjct: 705 PKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGI 764

Query: 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362
           +A I         VA   V +A +S+GQ C+     +V  D+    +  VA   + +  G
Sbjct: 765 NAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824

Query: 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 422
            P      +G +  +E  ++L   +     +     A    G   EG    +  P +   
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFA----GPAPEG---CFVAPHIFEL 877

Query: 423 VNHTMKLMQEEI 434
                  + EE+
Sbjct: 878 TEAGQ--LTEEV 887

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  180 bits (458), Expect = 2e-51
 Identities = 72/378 (19%), Positives = 118/378 (31%), Gaps = 44/378 (11%)

Query: 80  FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT 139
           F   +   V+     A +A   +  SS K+R  FLR +   I    E I EI S++TG  
Sbjct: 57  FAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLP 116

Query: 140 MVDASLGEIMTTCEKITWLLSEGEK--WLK-------PEYRSSGRSMIHKKAKVEFHPLG 190
               + GE   T  ++       EK  +L        PE + + R  I    ++   P+G
Sbjct: 117 EARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEI----RLVQRPVG 171

Query: 191 VVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 245
            V    + N+P             LAA   G  +V+K       +G      + AA+   
Sbjct: 172 PVAVFGASNFPLAFSTAGGDTAAALAA---GCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228

Query: 246 GAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV--TLELG 300
           G    +  +I G + + G ALV    +  + F GS   GR +    +    P+    ELG
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288

Query: 301 GKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIV 356
             +   +  +        +      +    +GQ C       V        F +   + +
Sbjct: 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEAL 348

Query: 357 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 416
             V+    L                        A     + L        S G       
Sbjct: 349 AKVAPQTMLTDGIAKA---------YRDGQARFATRNAVKPLLATE----SSGRDASPNL 395

Query: 417 PTVIVNVNHTMKLMQEEI 434
                        + EE+
Sbjct: 396 FETTGAQFLADHALGEEV 413

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  176 bits (449), Expect = 1e-50
 Identities = 58/362 (16%), Positives = 130/362 (35%), Gaps = 35/362 (9%)

Query: 81  PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
           P  + AE+D  +A+ +KAQ+ +A  S +Q  +  R       + +  + + +  ++G  +
Sbjct: 2   PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGI 61

Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200
           V+  + +     E I       ++                 A+    P+G++  IV    
Sbjct: 62  VEDKVIKNHFASEFI--YNKYKDEQTCGILEEDDNLGTMTIAE----PVGIICGIVPTTN 115

Query: 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 259
           P        L ++ + NGI+      A  S     +++  A  A GAP++++  I   + 
Sbjct: 116 PTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSV 175

Query: 260 ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 317
           E   AL+    +  I+  G PG+ +        +  P      G    ++ +  D+    
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAV 231

Query: 318 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 377
              + +    +G  CA  +   V  ++Y     + A               +    +   
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------HKAH----VLSK 276

Query: 378 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGA---VDQ---YFPPTVIVNVNHTMKLMQ 431
             ++K++ ++       A+I+ +     ++E A   V           +  V++      
Sbjct: 277 TDADKVRKVLLIDGALNAKIVGQ-PATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH 335

Query: 432 EE 433
           E+
Sbjct: 336 EK 337

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  148 bits (377), Expect = 4e-40
 Identities = 91/393 (23%), Positives = 170/393 (43%), Gaps = 29/393 (7%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           YI       +++       PAT + L   P  ++ ++D     A +A K W+K +  +R 
Sbjct: 9   YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRR- 67

Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
              RIL  +   + +H+E +  + + + GK   +A LGE+    E + +        +  
Sbjct: 68  --ARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPS-LMMG 123

Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVS 224
           +  +S    +   +A    +P+GVVG I  +N+P   +     PM  A+  GN  ++K S
Sbjct: 124 DSLASIATDV---EAANYRYPIGVVGGIAPFNFPMM-VPCWMFPM--AIALGNTFILKPS 177

Query: 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282
           E           + + A    G P+ + +V+ G  +    ++    +  I FVGS  VG 
Sbjct: 178 ERTPLLTEKLVELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGE 233

Query: 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 342
            + +  S+ L  V    G K+  IV +D ++       V AA  S+G+ C       V  
Sbjct: 234 YVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEE 293

Query: 343 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 402
            I   F++++ + V  +  G  L     +G +   ++ ++  + +   L++GA ++  G 
Sbjct: 294 GIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR 353

Query: 403 FGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEI 434
                  + D YF  PT+  NV   M + ++EI
Sbjct: 354 ----ENVSDDGYFVGPTIFDNVTTEMTIWKDEI 382

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  146 bits (371), Expect = 6e-39
 Identities = 79/399 (19%), Positives = 146/399 (36%), Gaps = 41/399 (10%)

Query: 57  GRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLR 115
                +        P      +  F    +A ++  +  A  A+K W       R    +
Sbjct: 70  DEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR---AQ 126

Query: 116 ILLKY--IIE--HQELICEISSRDTGKTMVDASLGEIMTTCEKITWL---LSEGEKWLKP 168
           + LK   ++    +  +   +    GKT++ A +       E I +         +    
Sbjct: 127 VFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAA---AELIDFFRFNAKFAVELEGE 183

Query: 169 EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSEN 226
           +  S   S         +  L G V AI  +N  F  I  N   A    GN ++ K S+ 
Sbjct: 184 QPISVPPS----TNHTVYRGLEGFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDT 237

Query: 227 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRM 283
           A  +    +RI++ A    G P N++  +     T G+ + SS  +  I F GS    + 
Sbjct: 238 AMLASYAVYRILREA----GLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKH 293

Query: 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 337
           + R  +      +T   +  E GGK+   V    DV  V    +R+A +  GQ C+   R
Sbjct: 294 LWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSR 353

Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAE 396
            YV + ++     ++ +    +  G P         A+   +   +++  +  A    + 
Sbjct: 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413

Query: 397 ILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEI 434
            +  G   + S G    Y+  P +I + +    +M+EEI
Sbjct: 414 SILAGGQCNESVG----YYVEPCIIESKDPQEPIMKEEI 448

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  145 bits (369), Expect = 8e-39
 Identities = 86/398 (21%), Positives = 171/398 (42%), Gaps = 35/398 (8%)

Query: 52  YIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRR 111
           +I  +     S      + PAT +  G     S A++   V  A+ AQ  WA ++ ++R 
Sbjct: 30  FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRR- 88

Query: 112 QFLRILLKY---IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKP 168
              R+ +K+   + ++   + E+ SR+ GKT+ DA  G+I+   E   +++       K 
Sbjct: 89  --ARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPH-LQKS 144

Query: 169 EYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYP-------FHNIFNPMLAAVFSGNGIV 220
           E+    G  +          P+G+   I  +N+P       F         A+  GN  +
Sbjct: 145 EFTEGAGPGI---DMYSIRQPVGIGAGITPFNFPGMIPMWMF-----AP--AIACGNAFI 194

Query: 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSP 278
           +K SE           ++  A    G P  +++V+ G     +A+++   +  + FVGS 
Sbjct: 195 LKPSERDPSVPIRLAELMIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250

Query: 279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAER 337
            + R +   A+          G K+  I+  D D+   A   + A   S+G+ C A +  
Sbjct: 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA 310

Query: 338 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 397
             V  +     + ++  +V+S+  GP    K DMG +   E  +++++L++  +++GA++
Sbjct: 311 VPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKL 370

Query: 398 LARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEI 434
           +  G      +G  + +F    +  +V   M + + EI
Sbjct: 371 VVDGR-DFKLQGYENGHFIGGCLFDDVTPDMDIYKTEI 407

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 3e-07
 Identities = 52/407 (12%), Positives = 114/407 (28%), Gaps = 104/407 (25%)

Query: 81  PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140
             LS+ E+D  +                  R F  +L K                  + M
Sbjct: 44  SILSKEEIDHIIMSKDAVSGT--------LRLFWTLLSK-----------------QEEM 78

Query: 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN- 199
           V   + E++       +L+S     +K E R    SM+ +    +   L        +N 
Sbjct: 79  VQKFVEEVLRI--NYKFLMSP----IKTEQR--QPSMMTRMYIEQRDRL--------YND 122

Query: 200 ---YPFHNIFNP--------MLAAVFSGNGIVI-------K------VSENASWSGCFYF 235
              +  +N+            L  +     ++I       K      V  +        F
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMR--NASKTLT 293
           +I    L    +PE +++++       + L+  +D      S     + +R  +    L 
Sbjct: 183 KIFWLNLKNCNSPETVLEML-------QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 294 PVTLELGGKDAFIVCDDV-DVPHVA------QIAV--R-AALQSSGQNCAGAERFYVH-- 341
            +      ++  +V  +V +           +I +  R   +               H  
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 342 --------RDIYALFVSQ-VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 392
                   + +   ++      + + V    P      + A  + +      N  +   D
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCD 353

Query: 393 KGAEILARGSFGHLSEGAVDQYFPPTVI--VNVNHTMKLMQEEIILW 437
           K   I+   S   L      + F    +   + +    L+    ++W
Sbjct: 354 KLTTIIES-SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS---LIW 396

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} Length = 463

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 57/290 (19%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD-------TGK 138
             V+++   AR   ++ A    +QR + +  L   + + ++ I   + +D          
Sbjct: 29  PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88

Query: 139 TMVD------ASLGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLG 190
            ++       + L  +     +I     +  G   L+    +    +  ++  V   P+G
Sbjct: 89  PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKN--LELEQVTV---PIG 142

Query: 191 VVGAI------VSWNYPFHNIFNPMLAAVF---SGNGIVIKVSENASWSGCFYFRIIQAA 241
           V+  I                      A     SGNG+++K  + A+ S      + Q A
Sbjct: 143 VLLVIFESRPDCLPQ-----------VAALAIASGNGLLLKGGKEAAHSNRILHLLTQEA 191

Query: 242 LAAVGAPENLVDVITGFAETGE--ALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299
           L+  G  E  V ++    E  +   L   +D II  GS  + R I + A     PV    
Sbjct: 192 LSIHGVKE-AVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAA--KGIPVMGHS 248

Query: 300 GGKDAFIVC-----DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 344
            G     +C      +  V  V ++   +  +     C   E   +HRD+
Sbjct: 249 EG-----ICHMYVDSEASVDKVTRLVRDSKCEYPAA-CNALETLLIHRDL 292

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	439
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=6.2e-88  Score=697.51  Aligned_cols=386  Identities=28%  Similarity=0.407  Sum_probs=359.8

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      .++.++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+.+|.++|+++++.|++|+
T Consensus         4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~   83 (490)
T 2wme_A            4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN   83 (490)
T ss_dssp             SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+|||+.+++..|+..+++.++|+++..++... +..+..   .....+++|+|+|||++|+|||||+...
T Consensus        84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~  159 (490)
T 2wme_A           84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG-EQIPLR---ETSFVYTRREPLGVVAGIGAWNYPVQIA  159 (490)
T ss_dssp             HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCE-EEEEEE---TTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccC-cccccc---CCcceeEEecceeEEEEeccccCcchhh
Confidence            999999999999999999666799999999999998876533 222221   3356788999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+
T Consensus       160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~e----aGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~  235 (490)
T 2wme_A          160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK  235 (490)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHH----hCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence            99999999999999999999999999988888766    899999999999975 78899988  899999999999999


Q ss_pred             HHHH-HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       283 ~v~~-~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      ++++ .++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus       236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v  315 (490)
T 2wme_A          236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL  315 (490)
T ss_dssp             HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence            8876 567789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++||++++||.+.......+|+|++||||.++++||++++||+||||+
T Consensus       316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl  393 (490)
T 2wme_A          316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVM  393 (490)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEE
Confidence            999999999999999999999999999999999999999997765545689999999999999999999999999985

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.1e-84  Score=674.12  Aligned_cols=395  Identities=20%  Similarity=0.279  Sum_probs=359.1

Q ss_pred             CCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 013608           37 DVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI  116 (439)
Q Consensus        37 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~  116 (439)
                      .++-|-.+......+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus        15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~   94 (521)
T 4e4g_A           15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK   94 (521)
T ss_dssp             ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence            33778878877788999999999888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEc
Q 013608          117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV  196 (439)
Q Consensus       117 l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~  196 (439)
                      +++.|++|+++|++++++|+||+..++. +|+..+++.++|+++..... ..+..+.  ...+...+++++|+|||++|+
T Consensus        95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~P~GVV~~I~  170 (521)
T 4e4g_A           95 FVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQ-KSEFTEG--AGPGIDMYSIRQPVGIGAGIT  170 (521)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHT-CEEEEEE--EETTEEEEEEEEECCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-cCccccc--CCCCcceeEEEcCCcEEEEEC
Confidence            9999999999999999999999999994 79999999999999765543 3322211  012345788999999999999


Q ss_pred             CCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEE
Q 013608          197 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIF  274 (439)
Q Consensus       197 p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f  274 (439)
                      |||||+...++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|+.+.++.|++  ++|+|+|
T Consensus       171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~F  246 (521)
T 4e4g_A          171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIE----AGLPAGILNVVNGDKGAVDAILTHPDIAAVSF  246 (521)
T ss_dssp             CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTCTTCCEEEE
T ss_pred             CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCcCeEEEEeCChHHHHHHHhCCCcCEEEE
Confidence            99999999999999999999999999999999999988887765    89999999999998888889987  8999999


Q ss_pred             eCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHHHHHHH
Q 013608          275 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVA  353 (439)
Q Consensus       275 ~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~  353 (439)
                      |||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|.
T Consensus       247 TGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~  326 (521)
T 4e4g_A          247 VGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLV  326 (521)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             HHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccC
Q 013608          354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE  433 (439)
Q Consensus       354 ~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E  433 (439)
                      ++++++++|+|.++++++|||+++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||
T Consensus       327 ~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE  406 (521)
T 4e4g_A          327 PMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTE  406 (521)
T ss_dssp             HHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSC
T ss_pred             HHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCc
Confidence            99999999999999999999999999999999999999999999999986433334679999999999999999999999


Q ss_pred             ccccCC
Q 013608          434 IILWVS  439 (439)
Q Consensus       434 ~FgPv~  439 (439)
                      +||||+
T Consensus       407 iFGPVl  412 (521)
T 4e4g_A          407 IFGPVL  412 (521)
T ss_dssp             CCSSEE
T ss_pred             ccCcEE
Confidence            999985

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1.1e-83  Score=666.17  Aligned_cols=380  Identities=28%  Similarity=0.468  Sum_probs=355.3

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   91 (484)
T 3ifg_A           12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD   91 (484)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            45689999999888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++ .+|+..+++.++|++...++.... ..+..  ..+...+++++|+|||++|+|||||+...++
T Consensus        92 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  167 (484)
T 3ifg_A           92 LALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR  167 (484)
T ss_dssp             HHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence            9999999999999998 479999999999999887764322 22211  1235678999999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|.||||+.+|+.|
T Consensus       168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i  243 (484)
T 3ifg_A          168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAER----AGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL  243 (484)
T ss_dssp             HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence            999999999999999999999999988887665    899999999999965 78899988  89999999999999999


Q ss_pred             HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608          285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP  364 (439)
Q Consensus       285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~  364 (439)
                      ++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  323 (484)
T 3ifg_A          244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG  323 (484)
T ss_dssp             HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++++++|||+++.++++++++|++++++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  394 (484)
T 3ifg_A          324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLA  394 (484)
T ss_dssp             TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEE
T ss_pred             CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEE
Confidence            99999999999999999999999999999999999998532    379999999999999999999999999985

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=1.5e-83  Score=668.69  Aligned_cols=386  Identities=29%  Similarity=0.449  Sum_probs=358.6

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-----HHhhcCHHHHHHHHHHHHHHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYI  121 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~l~~~l  121 (439)
                      ...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.     .|+.++..+|.++|+++++.|
T Consensus         6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l   85 (503)
T 3iwj_A            6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV   85 (503)
T ss_dssp             CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence            345689999999988889999999999999999999999999999999999999     999999999999999999999


Q ss_pred             HHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcc
Q 013608          122 IEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP  201 (439)
Q Consensus       122 ~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P  201 (439)
                      ++|+++|++++++|+||+..++ ..|+..+++.++|++++.+++......+..........+++++|+|||++|+|||||
T Consensus        86 ~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P  164 (503)
T 3iwj_A           86 TEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP  164 (503)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred             HHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence            9999999999999999999998 479999999999999998876544322211111345678999999999999999999


Q ss_pred             hhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCCh
Q 013608          202 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSP  278 (439)
Q Consensus       202 ~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~  278 (439)
                      +...++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|+.  ++|+|+||||+
T Consensus       165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~  240 (503)
T 3iwj_A          165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKE----VGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS  240 (503)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCH
T ss_pred             HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHH----hCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcH
Confidence            999999999999999999999999999999988877665    899999999999975 77889987  89999999999


Q ss_pred             HHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608          279 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS  358 (439)
Q Consensus       279 ~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~  358 (439)
                      .+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus       241 ~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~  320 (503)
T 3iwj_A          241 ATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN  320 (503)
T ss_dssp             HHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608          359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV  438 (439)
Q Consensus       359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv  438 (439)
                      +++|+|+++++++|||+++.++++++++|++++++||++++||.+...  ...|+|++|||+.+++++|++++||+||||
T Consensus       321 ~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV  398 (503)
T 3iwj_A          321 IKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEH--LKKGFFIEPTIITDVTTNMQIWREEVFGPV  398 (503)
T ss_dssp             CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CCSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred             ccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCcc--CCCCceeCCeeeecCCCCchhhCceeeCce
Confidence            999999999999999999999999999999999999999999985321  257999999999999999999999999998


Q ss_pred             C
Q 013608          439 S  439 (439)
Q Consensus       439 ~  439 (439)
                      +
T Consensus       399 l  399 (503)
T 3iwj_A          399 L  399 (503)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.6e-83  Score=669.46  Aligned_cols=384  Identities=25%  Similarity=0.395  Sum_probs=358.0

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      .+.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||  ..|+.++..+|.++|+++++.|++++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  111 (520)
T 3ed6_A           32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR  111 (520)
T ss_dssp             CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence            3568999999998888999999999999999999999999999999999999  88999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+||+..+++ +|+..+++.++|++..++++... ..+...  .....+++++|+|||++|+|||||+...
T Consensus       112 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~  187 (520)
T 3ed6_A          112 EALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQA  187 (520)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHH
Confidence            9999999999999999995 79999999999999998875432 222211  2356789999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+
T Consensus       188 ~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~e----aGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~  263 (520)
T 3ed6_A          188 SWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE----VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK  263 (520)
T ss_dssp             HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHH----HCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHH----hCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHH
Confidence            99999999999999999999999999988887765    899999999999964 78899987  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       264 ~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG  343 (520)
T 3ed6_A          264 HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG  343 (520)
T ss_dssp             HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBC
T ss_pred             HHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||+++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||+
T Consensus       344 ~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl  420 (520)
T 3ed6_A          344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVV  420 (520)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEE
Confidence            99999999999999999999999999999999999999986432223579999999999999999999999999985

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=2.7e-83  Score=665.53  Aligned_cols=378  Identities=27%  Similarity=0.446  Sum_probs=354.1

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  111 (504)
T 3ek1_A           32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD  111 (504)
T ss_dssp             CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34689999999988889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+|||..+++ +|+..+++.++|++....+.... ..+..  ..+...+++++|+|||++|+|||||+...++
T Consensus       112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  187 (504)
T 3ek1_A          112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGD-TIPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR  187 (504)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence            99999999999999984 69999999999999987764322 22211  1235678999999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|+.|
T Consensus       188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~e----aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i  263 (504)
T 3ek1_A          188 KAAPALAAGCTMIVRPADLTPLTALALGVLAEK----AGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL  263 (504)
T ss_dssp             HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----hCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence            999999999999999999999999988877665    899999999999865 78899988  89999999999999999


Q ss_pred             HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608          285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP  364 (439)
Q Consensus       285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~  364 (439)
                      ++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  343 (504)
T 3ek1_A          264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG  343 (504)
T ss_dssp             HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++++++|||+++.++++++++|++++++||++++||.+      ..|+|++|||+.+++++|++++||+||||+
T Consensus       344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  412 (504)
T 3ek1_A          344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLA  412 (504)
T ss_dssp             TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred             ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEE
Confidence            999999999999999999999999999999999999984      369999999999999999999999999985

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=1.3e-83  Score=668.23  Aligned_cols=381  Identities=26%  Similarity=0.400  Sum_probs=357.6

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus        10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   89 (506)
T 3rh9_A           10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE   89 (506)
T ss_dssp             SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence            44578999999998888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEE-eeccEEEEEcCCCcchhhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~PlGVv~~i~p~N~P~~~~  205 (439)
                      +|++++++|+||+..++. +|+..+++.++|++++++++... ..+..   .+...++++ +|+|||++|+|||||+...
T Consensus        90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  164 (506)
T 3rh9_A           90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSH-TIPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI  164 (506)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCE-ECSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence            999999999999999996 89999999999999999887543 22222   335677888 9999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|+
T Consensus       165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~  240 (506)
T 3rh9_A          165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDK----LDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR  240 (506)
T ss_dssp             HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTT----TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHH----hCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999988877655    899999999999965 78899988  799999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G  320 (506)
T 3rh9_A          241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG  320 (506)
T ss_dssp             HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred             HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||+++.++++++++|++++++||++++||.+.+   ...|+|++|||+.+++++|++++||+||||+
T Consensus       321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  394 (506)
T 3rh9_A          321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLV  394 (506)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred             CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence            9999999999999999999999999999999999999998532   1279999999999999999999999999985

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=2.6e-83  Score=666.01  Aligned_cols=386  Identities=26%  Similarity=0.424  Sum_probs=356.2

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      ....++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~   89 (497)
T 3k2w_A           10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK   89 (497)
T ss_dssp             CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred             ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence            35567899999999888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+||+..++. .|+..+++.++|++++++++..... +..  ..+...+++++|+|||++|+|||||+...
T Consensus        90 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  165 (497)
T 3k2w_A           90 HILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALA  165 (497)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHH
Confidence            9999999999999999995 7999999999999999888754422 221  13456789999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|+
T Consensus       166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~  241 (497)
T 3k2w_A          166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKE----AGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGK  241 (497)
T ss_dssp             HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHH----TTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHH
Confidence            99999999999999999999999999988887655    899999999999965 78899988  799999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       242 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg  321 (497)
T 3k2w_A          242 QIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVG  321 (497)
T ss_dssp             HHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred             HHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||+++.++++++++|++++++||++++||.+...+..+.|+|++|||+.+++++|++++||+||||+
T Consensus       322 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl  398 (497)
T 3k2w_A          322 DPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPIL  398 (497)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEE
Confidence            99999999999999999999999999999999999999984211122379999999999999999999999999985

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=3.9e-83  Score=666.20  Aligned_cols=382  Identities=24%  Similarity=0.385  Sum_probs=354.9

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      +.+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++++
T Consensus        37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~  116 (517)
T 2o2p_A           37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE  116 (517)
T ss_dssp             CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            3579999999886678999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCcc-ccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      +|++++++|+|||..++..+|+..+++.++|++++++++.... .+.... ......+++++|+|||++|+|||||+...
T Consensus       117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  195 (517)
T 2o2p_A          117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML  195 (517)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence            9999999999999999965899999999999999988765432 222100 11235689999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|+
T Consensus       196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~  271 (517)
T 2o2p_A          196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLK----AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK  271 (517)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----TTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH----hCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999988888765    899999999999965 67888988  899999999999999


Q ss_pred             HHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       283 ~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      .|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v  351 (517)
T 2o2p_A          272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI  351 (517)
T ss_dssp             HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred             HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            9999999 999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++||++++||....    ..|+|++||||.+++++|++++||+||||+
T Consensus       352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  425 (517)
T 2o2p_A          352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIM  425 (517)
T ss_dssp             SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEE
Confidence            99999999999999999999999999999999999999998531    369999999999999999999999999985

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=7.1e-83  Score=661.81  Aligned_cols=382  Identities=26%  Similarity=0.399  Sum_probs=354.9

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus        24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  103 (497)
T 3i44_A           24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS  103 (497)
T ss_dssp             EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999998888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEE-EeeccEEEEEcCCCcchhhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~PlGVv~~i~p~N~P~~~~  205 (439)
                      +|++++++|+||+..+++.+|+..+++.++++++....+..+...+     .+...+++ ++|+|||++|+|||||+...
T Consensus       104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  178 (497)
T 3i44_A          104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQV  178 (497)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHH
Confidence            9999999999999999966899999999999998877654432221     12346778 99999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+
T Consensus       179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~  254 (497)
T 3i44_A          179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE----AALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGK  254 (497)
T ss_dssp             HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHH----hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence            99999999999999999999999999988887665    899999999999965 78899987  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++++++|+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       255 ~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG  333 (497)
T 3i44_A          255 DISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG  333 (497)
T ss_dssp             HHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||+++.++++++++|++++++||++++||..... ....|+|++|||+.+++++|++++||+||||+
T Consensus       334 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  409 (497)
T 3i44_A          334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVL  409 (497)
T ss_dssp             CTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceE
Confidence            99999999999999999999999999999999999999952111 12479999999999999999999999999985

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=1e-82  Score=661.94  Aligned_cols=386  Identities=28%  Similarity=0.390  Sum_probs=357.0

Q ss_pred             CCCCcccccCCcccCCCCCCe-EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 013608           45 TPDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE  123 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~  123 (439)
                      ......+||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++
T Consensus        16 ~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~   95 (503)
T 1a4s_A           16 VVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRE   95 (503)
T ss_dssp             CCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHH
Confidence            334567899999998877778 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchh
Q 013608          124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH  203 (439)
Q Consensus       124 ~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~  203 (439)
                      |+++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+..   .+...+++++|+|||++|+|||||+.
T Consensus        96 ~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~  170 (503)
T 1a4s_A           96 RRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFM  170 (503)
T ss_dssp             THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHH
Confidence            99999999999999999998 57999999999999999887654 222222   23456889999999999999999999


Q ss_pred             hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHH
Q 013608          204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      ..++++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|.++.++.|++  ++|+|+||||+.+|
T Consensus       171 ~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~----aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G  246 (503)
T 1a4s_A          171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE----AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTG  246 (503)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHH
Confidence            9999999999999999999999999999988888765    89999999999995577888987  79999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      +.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       247 ~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  326 (503)
T 1a4s_A          247 KKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV  326 (503)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCC--CCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~--~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++||++++||....++.  ...|+|++|||+.+++++|++++||+||||+
T Consensus       327 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  406 (503)
T 1a4s_A          327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM  406 (503)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceE
Confidence            99999999999999999999999999999999999999998531111  1369999999999999999999999999985

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.1e-83  Score=666.07  Aligned_cols=381  Identities=28%  Similarity=0.372  Sum_probs=355.0

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus        13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   92 (517)
T 3r31_A           13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND   92 (517)
T ss_dssp             CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            34678999999998888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhh---hcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH  203 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~  203 (439)
                      +|++++++|+||+..++   |+..+++.++|++++.++   ++..+..+..   .+. .+++++|+|||++|+|||||+.
T Consensus        93 ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~  165 (517)
T 3r31_A           93 ALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQ  165 (517)
T ss_dssp             HHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred             HHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHH
Confidence            99999999999999987   999999999999988776   2333333321   234 8899999999999999999999


Q ss_pred             hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHH
Q 013608          204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      ..++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|+.+.++.|++  .+|+|+||||+.+|
T Consensus       166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~e----aGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G  241 (517)
T 3r31_A          166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIE----AGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTG  241 (517)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHH----TTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHH----hCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHH
Confidence            9999999999999999999999999999988887765    89999999999996688999998  79999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      +.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       242 ~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  321 (517)
T 3r31_A          242 RKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL  321 (517)
T ss_dssp             HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred             HHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++||++++|| +........|+|++|||+.+++++|++++||+||||+
T Consensus       322 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  398 (517)
T 3r31_A          322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVM  398 (517)
T ss_dssp             CCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEE
T ss_pred             CCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEE
Confidence            9999999999999999999999999999999999999999 4211123579999999999999999999999999985

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=1.4e-82  Score=660.18  Aligned_cols=380  Identities=27%  Similarity=0.418  Sum_probs=355.5

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ...+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+   .|+.++..+|.++|+++++.|++|
T Consensus        20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (501)
T 1bxs_A           20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD   99 (501)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence            34689999999887778999999999999999999999999999999999999   899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++...|+..+++.++|++++++++.... .+..   .+...+++++|+|||++|+|||||+..
T Consensus       100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~  175 (501)
T 1bxs_A          100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM  175 (501)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHH
Confidence            999999999999999998867899999999999999998875542 2221   234568899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|
T Consensus       176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G  251 (501)
T 1bxs_A          176 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKE----AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG  251 (501)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHH----hCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence            999999999999999999999999999988887665    899999999999954 78899998  79999999999999


Q ss_pred             HHHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      +.|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       252 ~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  331 (501)
T 1bxs_A          252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV  331 (501)
T ss_dssp             HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcC
Confidence            99999999 99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.++++++|||+++.++++++++|++++++||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  406 (501)
T 1bxs_A          332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQ  406 (501)
T ss_dssp             BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceE
Confidence            99999999999999999999999999999999999999999742    1369999999999999999999999999985

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=9e-83  Score=661.48  Aligned_cols=379  Identities=26%  Similarity=0.403  Sum_probs=355.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      ..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+   .|+.++..+|.++|+++++.|++|+
T Consensus        20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~   99 (500)
T 1o04_A           20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR   99 (500)
T ss_dssp             CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            3589999999887788999999999999999999999999999999999999   9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++|++++++|+||+..++...|+..+++.++|++++++++..+. .+..   .+...+++++|+|||++|+|||||+...
T Consensus       100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~  175 (500)
T 1o04_A          100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQ  175 (500)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHH
Confidence            99999999999999998867899999999999999988875542 2221   2345688999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|. .+.++.|++  ++|+|+||||+.+|+
T Consensus       176 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~  251 (500)
T 1o04_A          176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKE----AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR  251 (500)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH----hCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence            99999999999999999999999999988877665    89999999999995 478899998  799999999999999


Q ss_pred             HHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       283 ~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      .|++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       252 ~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  331 (500)
T 1o04_A          252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV  331 (500)
T ss_dssp             HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred             HHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcC
Confidence            9999999 999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       332 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  405 (500)
T 1o04_A          332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM  405 (500)
T ss_dssp             CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEE
Confidence            9999999999999999999999999999999999999999842    1369999999999999999999999999985

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=2.9e-82  Score=658.61  Aligned_cols=382  Identities=22%  Similarity=0.320  Sum_probs=356.2

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .+.+||+|+|+.  ++++++++||+||+++++++.++.+|+++++++|++||..|+.++..+|.++|+++++.|++|+++
T Consensus        23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  100 (500)
T 2j6l_A           23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV  100 (500)
T ss_dssp             EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            355799999994  567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++ .+|+..+++.++|++++.+++... ..+..  ......+++++|+|||++|+|||||+...++
T Consensus       101 la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  176 (500)
T 2j6l_A          101 LGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGW  176 (500)
T ss_dssp             HHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence            9999999999999998 689999999999999887765332 11211  0123457789999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      ++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|+.+.++.|++  ++|+|+||||+.+|+.|+
T Consensus       177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~  256 (500)
T 2j6l_A          177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVG  256 (500)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999996678899987  999999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus       257 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~  336 (500)
T 2j6l_A          257 LMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW  336 (500)
T ss_dssp             HHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred             HHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||+++.++++++++|++++++|+++++||...+    ..|+|++|||+.+++++|++++||+||||+
T Consensus       337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  406 (500)
T 2j6l_A          337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPIL  406 (500)
T ss_dssp             STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred             cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence            9999999999999999999999999999999999998531    369999999999999999999999999985

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=1.1e-82  Score=660.65  Aligned_cols=387  Identities=23%  Similarity=0.342  Sum_probs=355.7

Q ss_pred             CCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 013608           39 LDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILL  118 (439)
Q Consensus        39 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~  118 (439)
                      +.|.... ...++||+|+|+.+.++ +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus        17 ~~~~~~~-~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a   94 (498)
T 4f3x_A           17 NLYFQSM-MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIA   94 (498)
T ss_dssp             ------C-CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred             chhhhhc-cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence            4444443 45679999999998766 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCC
Q 013608          119 KYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW  198 (439)
Q Consensus       119 ~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~  198 (439)
                      +.|++|+++|++++++|+||+..++..+|+..+++.++|+++.++++... ..+..  ..+...+++++|+|||++|+||
T Consensus        95 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~Pw  171 (498)
T 4f3x_A           95 DAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPW  171 (498)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCS
T ss_pred             HHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCC
Confidence            99999999999999999999999995589999999999999998875332 22211  1245678999999999999999


Q ss_pred             CcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEe
Q 013608          199 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFV  275 (439)
Q Consensus       199 N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~  275 (439)
                      |||+...++++++||++||+||+|||+.+|+++..+++++.+    + +|+|++|+|+|++ +.++.|++  ++|+|+||
T Consensus       172 N~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~e----a-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FT  246 (498)
T 4f3x_A          172 NYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIAD----I-LPEGVVNVITGRGETVGNALINHPKVGMVSIT  246 (498)
T ss_dssp             SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHT----T-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEE
T ss_pred             chHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHH----h-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEE
Confidence            999999999999999999999999999999999998888765    6 9999999999965 68899998  89999999


Q ss_pred             CChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHH
Q 013608          276 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI  355 (439)
Q Consensus       276 Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~  355 (439)
                      ||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus       247 GS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~  326 (498)
T 4f3x_A          247 GDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSA  326 (498)
T ss_dssp             SCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCC-EEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCc
Q 013608          356 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI  434 (439)
Q Consensus       356 ~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga-~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~  434 (439)
                      ++++++|+|.++++++|||+++.++++++++|++++++|| ++++||.+.    ...|+|++|||+.+++++|++++||+
T Consensus       327 ~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEi  402 (498)
T 4f3x_A          327 VSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREV  402 (498)
T ss_dssp             HTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCC
T ss_pred             HHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCce
Confidence            9999999999999999999999999999999999999999 999999853    24799999999999999999999999


Q ss_pred             cccCC
Q 013608          435 ILWVS  439 (439)
Q Consensus       435 FgPv~  439 (439)
                      ||||+
T Consensus       403 FGPVl  407 (498)
T 4f3x_A          403 FGPVV  407 (498)
T ss_dssp             CSSEE
T ss_pred             eCcEE
Confidence            99985

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.8e-82  Score=658.99  Aligned_cols=380  Identities=28%  Similarity=0.464  Sum_probs=355.1

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++|+++
T Consensus        10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e   89 (495)
T 3b4w_A           10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL   89 (495)
T ss_dssp             SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            479999999887778999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++...|+..+++.++|++++++++.... .+..   .....+++++|+|||++|+|||||+...++
T Consensus        90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  165 (495)
T 3b4w_A           90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN  165 (495)
T ss_dssp             HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence            999999999999999865899999999999999988875532 2211   223568899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      ++++||++||+||+|||+.+|+++.++++++.+    +|+|+|++|+|+|+.+.++.|++  ++|+|+||||+.+|+.|+
T Consensus       166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~  241 (495)
T 3b4w_A          166 KIAPALLAGCTIVLKPAAETPLTANALAEVFAE----VGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG  241 (495)
T ss_dssp             HHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHH----TTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEecCCccHHHHHHHHHHHHH----hCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            999999999999999999999999988888766    89999999999995578999988  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus       242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~  321 (495)
T 3b4w_A          242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS  321 (495)
T ss_dssp             HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred             HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||+++.++++++++|++++++||++++||.....  ...|+|++|||+.+++++|++++||+||||+
T Consensus       322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  393 (495)
T 3b4w_A          322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVL  393 (495)
T ss_dssp             CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceE
Confidence            99999999999999999999999999999999999985321  1369999999999999999999999999985

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=2.8e-82  Score=655.67  Aligned_cols=370  Identities=26%  Similarity=0.394  Sum_probs=344.9

Q ss_pred             cccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 013608           51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE  130 (439)
Q Consensus        51 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~  130 (439)
                      +||+|+|+.+  ++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++
T Consensus         2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~   78 (486)
T 3pqa_A            2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK   78 (486)
T ss_dssp             -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999875  45 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHH
Q 013608          131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML  210 (439)
Q Consensus       131 ~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~  210 (439)
                      ++++|+||+..+++ +|+..+++.++|++++++++.... .+..    +...+++++|+|||++|+|||||+...+++++
T Consensus        79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  152 (486)
T 3pqa_A           79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA  152 (486)
T ss_dssp             HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred             HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence            99999999999995 799999999999999988864432 3322    35678999999999999999999999999999


Q ss_pred             HHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       211 ~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      +||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+.|++.
T Consensus       153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~  232 (486)
T 3pqa_A          153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK  232 (486)
T ss_dssp             HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999976 56899987  89999999999999999999


Q ss_pred             hhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCC
Q 013608          288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG  367 (439)
Q Consensus       288 aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~  367 (439)
                      ++  ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus       233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~  310 (486)
T 3pqa_A          233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE  310 (486)
T ss_dssp             CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred             cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence            88  8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       368 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|||+++.++++++++|++++++||++++||.+       .|+|++|||+ +++++|++++||+||||+
T Consensus       311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl  374 (486)
T 3pqa_A          311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVI  374 (486)
T ss_dssp             TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEE
T ss_pred             CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEE
Confidence            999999999999999999999999999999999972       5899999999 999999999999999985

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=5.3e-82  Score=658.38  Aligned_cols=382  Identities=25%  Similarity=0.387  Sum_probs=354.6

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus        27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el  106 (515)
T 2d4e_A           27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL  106 (515)
T ss_dssp             BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45799999998877789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++. .|+..+++.++|++++++++... ..+..  ..+...+++++|+|||++|+|||||+...+++
T Consensus       107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  182 (515)
T 2d4e_A          107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR  182 (515)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence            9999999999999996 89999999999999988876542 22221  12345788999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+.|+
T Consensus       183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~  258 (515)
T 2d4e_A          183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKE----ADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM  258 (515)
T ss_dssp             HHHHHHTTCCEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             hhHHHHcCCeeeecCCCCcHHHHHHHHHHHHH----hCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence            99999999999999999999999988888765    899999999999964 67889987  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus       259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~  338 (515)
T 2d4e_A          259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL  338 (515)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred             HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH----LSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~----~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||+++.++++++++|++++++||++++||....    ++....|+|++|||+.+ +++|++++||+||||+
T Consensus       339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl  415 (515)
T 2d4e_A          339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVL  415 (515)
T ss_dssp             STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEE
T ss_pred             cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCce
Confidence            9999999999999999999999999999999999998532    11123699999999999 9999999999999985

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-82  Score=661.81  Aligned_cols=381  Identities=28%  Similarity=0.404  Sum_probs=357.0

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ..++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++||  ..|+.++..+|.++|+++++.|+++
T Consensus        22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~  101 (528)
T 3u4j_A           22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR  101 (528)
T ss_dssp             BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            45689999999988889999999999 99999999999999999999999999  7899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+...  .+...+++++|+|||++|+|||||+..
T Consensus       102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~  177 (528)
T 3u4j_A          102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFII  177 (528)
T ss_dssp             HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHH
Confidence            9999999999999999999 78999999999999999887643 2233221  235678999999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|
T Consensus       178 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G  253 (528)
T 3u4j_A          178 ASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELARE----AGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVG  253 (528)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHH----hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence            999999999999999999999999999988888765    799999999999954 78899998  89999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      +.|++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       254 ~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  333 (528)
T 3u4j_A          254 TKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAF  333 (528)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++||++++.++++++++|++++++||++++||.+...   ..|+|++|||+.+++++|++++||+||||+
T Consensus       334 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  408 (528)
T 3u4j_A          334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVL  408 (528)
T ss_dssp             ECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEE
Confidence            999999999999999999999999999999999999999985321   279999999999999999999999999985

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=5.9e-82  Score=656.07  Aligned_cols=375  Identities=30%  Similarity=0.438  Sum_probs=350.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      .++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|+.++..+|.++|+++++.|++|+++|
T Consensus        12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   91 (505)
T 3prl_A           12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII   91 (505)
T ss_dssp             CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccc---cccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      ++++++|+||+..++. +|+..+++.++|++++++++.... .+.....   .....+++++|+|||++|+|||||+...
T Consensus        92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  169 (505)
T 3prl_A           92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA  169 (505)
T ss_dssp             HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence            9999999999999995 699999999999999988764422 2211000   0345788999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      ++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+
T Consensus       170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~  245 (505)
T 3prl_A          170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALAD----AGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE  245 (505)
T ss_dssp             HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence            99999999999999999999999999887776654    999999999999964 78899987  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++  ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g  323 (505)
T 3prl_A          246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG  323 (505)
T ss_dssp             HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred             HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence            9999998  99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|. +++++|||+++.++++++++|++++++||++++||.       ..|+|++|||+.+++++|++++||+||||+
T Consensus       324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  392 (505)
T 3prl_A          324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVL  392 (505)
T ss_dssp             CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEE
Confidence            999 999999999999999999999999999999999997       368999999999999999999999999985

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=7.2e-82  Score=653.14  Aligned_cols=379  Identities=28%  Similarity=0.421  Sum_probs=354.7

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus         7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   86 (479)
T 2imp_A            7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI   86 (479)
T ss_dssp             CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45799999998877789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++. .|+..+++.++|++++++++..+.. +..  ..+...+++++|+|||++|+|||||+...+++
T Consensus        87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  162 (479)
T 2imp_A           87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK  162 (479)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence            9999999999999985 8999999999999998887655432 221  12346789999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+.|+
T Consensus       163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~  238 (479)
T 2imp_A          163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM  238 (479)
T ss_dssp             HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCccchHHHHHHHHHHHH----hCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            99999999999999999999999998888765    899999999999965 57888987  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus       239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~  318 (479)
T 2imp_A          239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA  318 (479)
T ss_dssp             HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred             HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C-CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~-~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      + +++++|||+++.++++++++|++++++||++++||...+    ..|+|++|||+.+++++|++++||+||||+
T Consensus       319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl  389 (479)
T 2imp_A          319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVL  389 (479)
T ss_dssp             TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred             ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence            9 899999999999999999999999999999999998521    368999999999999999999999999985

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=1.1e-81  Score=651.99  Aligned_cols=379  Identities=27%  Similarity=0.458  Sum_probs=354.1

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      .++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus        10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l   89 (481)
T 3jz4_A           10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL   89 (481)
T ss_dssp             CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45899999999888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++ ..|+..+++.++|++....+.... ..+..  ..+...+++++|+|||++|+|||||+...+++
T Consensus        90 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  165 (481)
T 3jz4_A           90 ARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRK  165 (481)
T ss_dssp             HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence            999999999999998 479999999999999887654322 22211  12356789999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+.|+
T Consensus       166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~  241 (481)
T 3jz4_A          166 AGPALAAGCTMVLKPASQTPFSALALAELAIR----AGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM  241 (481)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            99999999999999999999999988877665    899999999999964 78899988  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus       242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~  321 (481)
T 3jz4_A          242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL  321 (481)
T ss_dssp             HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTT
T ss_pred             HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++|||+++.++++++++|++++++||++++||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       322 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl  391 (481)
T 3jz4_A          322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLA  391 (481)
T ss_dssp             STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             cCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceE
Confidence            999999999999999999999999999999999999853    2468999999999999999999999999985

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=4.8e-82  Score=655.30  Aligned_cols=381  Identities=24%  Similarity=0.370  Sum_probs=352.4

Q ss_pred             CCCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      .+....+||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|
T Consensus        20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~   98 (495)
T 1wnd_A           20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN   98 (495)
T ss_dssp             --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence            334456899999998766 7899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++...|+..+++.++|++++++++.. +..+..  ..+...+++++|+|||++|+|||||+..
T Consensus        99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~  175 (495)
T 1wnd_A           99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM  175 (495)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence            9999999999999999998544999999999999999887643 222211  1233568899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      .++++++||++||+||+|||+.+|+++..+++++.+    + +|+|++|+|+|. .+.++.|++  ++|+|+||||+.+|
T Consensus       176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----a-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G  250 (495)
T 1wnd_A          176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD----I-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG  250 (495)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT----T-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHH----h-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence            999999999999999999999999999998888765    6 999999999995 478999998  79999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      +.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  330 (495)
T 1wnd_A          251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS  330 (495)
T ss_dssp             HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred             HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCC-CEEEeCCC-CCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~~l~gG~-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++| |++++||. ..     ..|+|++|||+.+++++|++++||+||||+
T Consensus       331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  405 (495)
T 1wnd_A          331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV  405 (495)
T ss_dssp             CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred             CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence            999999999999999999999999999999999 99999997 42     269999999999999999999999999985

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=1.6e-81  Score=656.94  Aligned_cols=377  Identities=21%  Similarity=0.370  Sum_probs=353.3

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...+||+|+|+.  ++++++++||+| |+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus        37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~  114 (538)
T 3qan_A           37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH  114 (538)
T ss_dssp             EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            456899999987  578999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||+..++. .|+..+++.++|+++++.+++.++..+..   .+...+++++|+|||++|+|||||+...+
T Consensus       115 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  190 (538)
T 3qan_A          115 EFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMV  190 (538)
T ss_dssp             HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHH
Confidence            999999999999999995 69999999999999985555555554432   24568899999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+|+.
T Consensus       191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~  266 (538)
T 3qan_A          191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLED----AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVR  266 (538)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH----TTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHH----hCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence            9999999999999999999999999988877665    899999999999965 78999987  8999999999999999


Q ss_pred             HHHHhhcc------CCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          284 IMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       284 v~~~aa~~------l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |++.++++      ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++
T Consensus       267 i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~  346 (538)
T 3qan_A          267 LYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAK  346 (538)
T ss_dssp             HHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHT
T ss_pred             HHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHH
Confidence            99999998      999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++|+|.++++++|||+++.++++++++|++++++| ++++||....    ..|+|++|||+.+++++|++++||+|||
T Consensus       347 ~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGP  421 (538)
T 3qan_A          347 NLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGP  421 (538)
T ss_dssp             TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred             hccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCc
Confidence            9999999999999999999999999999999999999 9999998521    2799999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       422 Vl  423 (538)
T 3qan_A          422 VV  423 (538)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=3.5e-81  Score=648.46  Aligned_cols=376  Identities=27%  Similarity=0.437  Sum_probs=350.3

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+.  ++++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++|+++|
T Consensus        13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   90 (487)
T 2w8n_A           13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL   90 (487)
T ss_dssp             CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            4589999999864  78999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++. .|+..+++.++|+++++++.. .+..+..  ..+...+++++|+|||++|+|||||+...+++
T Consensus        91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  166 (487)
T 2w8n_A           91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK  166 (487)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence            9999999999999995 699999999999999887743 3322221  12346788999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEe---CCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~---~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      +++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+   |.+ +.++.|++  ++|+|+||||+.+|+
T Consensus       167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~  242 (487)
T 2w8n_A          167 VGAALAAGCTVVVKPAEDTPFSALALAELASQ----AGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK  242 (487)
T ss_dssp             HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred             HHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence            99999999999999999999999988887665    899999999999   743 67888987  799999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh-Ccc
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA  361 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~-l~~  361 (439)
                      .|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++
T Consensus       243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~  322 (487)
T 2w8n_A          243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV  322 (487)
T ss_dssp             HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred             HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCc-eeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~-~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+|.++++++|||+++.++++++++|++++++|+++++||...     ..|+ |++|||+.+++++|++++||+||||+
T Consensus       323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl  396 (487)
T 2w8n_A          323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLA  396 (487)
T ss_dssp             SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEE
T ss_pred             CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceE
Confidence            9999999999999999999999999999999999999999842     3688 99999999999999999999999985

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=1e-80  Score=648.21  Aligned_cols=378  Identities=26%  Similarity=0.335  Sum_probs=353.5

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      +.+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|++
T Consensus        11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~   90 (508)
T 3r64_A           11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE   90 (508)
T ss_dssp             CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence            34568999999998888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||+..++. .|+..+++.++|++++.++...  ..+.. ...+...+++++|+|||++|+|||||+...+
T Consensus        91 ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  166 (508)
T 3r64_A           91 EIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSI  166 (508)
T ss_dssp             HHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence            999999999999999995 6999999999999988775433  22211 0123567899999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHH-HHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      +++++||++||+||+|||+.+|+++ ..+.+++    .++|+|+|++|+++|+ .+.++.|++  ++|+|+||||+.+|+
T Consensus       167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~  242 (508)
T 3r64_A          167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR  242 (508)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHH
T ss_pred             HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHH
Confidence            9999999999999999999999999 8777665    4599999999999997 578999998  899999999999999


Q ss_pred             HHHHHhhc--cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          283 MIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       283 ~v~~~aa~--~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      .|++.+++  +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       243 ~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  322 (508)
T 3r64_A          243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIP  322 (508)
T ss_dssp             HHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence            99999998  9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.++++++|||+++.++++++++|++++++||++++||.+       .|+|++|||+.+++++|++++||+||||+
T Consensus       323 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl  394 (508)
T 3r64_A          323 TGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLI  394 (508)
T ss_dssp             BSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEE
T ss_pred             CCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceE
Confidence            9999999999999999999999999999999999999999982       68999999999999999999999999985

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=9.2e-81  Score=643.99  Aligned_cols=361  Identities=23%  Similarity=0.376  Sum_probs=341.9

Q ss_pred             eEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 013608           65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS  144 (439)
Q Consensus        65 ~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~  144 (439)
                      +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..+++
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~   84 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK   84 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999996


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecC
Q 013608          145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS  224 (439)
Q Consensus       145 ~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps  224 (439)
                       +|+..+++.++|++++++++..+.....    .+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus        85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps  159 (484)
T 3ros_A           85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA  159 (484)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence             8999999999999999998876654332    23568899999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCC
Q 013608          225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG  301 (439)
Q Consensus       225 ~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgG  301 (439)
                      +.+|+++..+++++.+    +|+|+|++|+|+|+++ .++ |++  ++|+|+||||+.+|+.|++.++++++|+++||||
T Consensus       160 ~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG  234 (484)
T 3ros_A          160 HNVPGSAALTAKIIKR----AGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG  234 (484)
T ss_dssp             TTCHHHHHHHHHHHHH----HTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             CCChHHHHHHHHHHHH----hCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence            9999999988887765    8999999999999764 566 887  8999999999999999999999999999999999


Q ss_pred             CceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHH
Q 013608          302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE  381 (439)
Q Consensus       302 k~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~  381 (439)
                      |||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++
T Consensus       235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~  314 (484)
T 3ros_A          235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE  314 (484)
T ss_dssp             CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred             CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       382 ~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++|++++++||++++||.+.    ...|+|++|||+.+++++|++++||+||||+
T Consensus       315 rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  368 (484)
T 3ros_A          315 KLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIA  368 (484)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEE
T ss_pred             HHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceE
Confidence            99999999999999999999853    2579999999999999999999999999985

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=1.4e-80  Score=645.74  Aligned_cols=375  Identities=23%  Similarity=0.350  Sum_probs=349.4

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      .+.+||+|+|+.+.  ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus        18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   95 (501)
T 1uxt_A           18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD   95 (501)
T ss_dssp             EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence            34689999999874  7899999999999999999999999999999999999 99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCcccc--ccceeEEEeeccEEEEEcCCCcchhh
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +|++++++|+||+..++. .|+..+++.++|++++++++.. +..+......  ....+++++|+|||++|+|||||+..
T Consensus        96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  173 (501)
T 1uxt_A           96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD  173 (501)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence            999999999999999996 8999999999999999887643 2222211011  23578999999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      .++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|+++.++.|++  ++|+|+||||+.+|+
T Consensus       174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~e----aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~  249 (501)
T 1uxt_A          174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLD----AGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGE  249 (501)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHH----hCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHH
Confidence            999999999999999999999999999988888765    89999999999997777888987  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .|++.++  ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       250 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g  327 (501)
T 1uxt_A          250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG  327 (501)
T ss_dssp             HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred             HHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCC
Confidence            9999988  99999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCC-ceeccEEEecCC---CCCcccccCccccC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEIILWV  438 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g-~~~~PTvl~~v~---~~~~i~~~E~FgPv  438 (439)
                      +|.++++++|||+++.++++++++|++++++||++++||..       .| +|++|||+.+++   ++|++++||+||||
T Consensus       328 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPV  400 (501)
T 1uxt_A          328 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPV  400 (501)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred             CccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCce
Confidence            99999999999999999999999999999999999999983       57 999999999999   99999999999998


Q ss_pred             C
Q 013608          439 S  439 (439)
Q Consensus       439 ~  439 (439)
                      +
T Consensus       401 l  401 (501)
T 1uxt_A          401 A  401 (501)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=9e-81  Score=645.66  Aligned_cols=379  Identities=22%  Similarity=0.320  Sum_probs=351.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus         6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   85 (486)
T 1t90_A            6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL   85 (486)
T ss_dssp             CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45899999998877789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||+..++ .+|+..+++.++|++...+. +..+..+..  ..+...+++++|+|||++|+|||||+...+++
T Consensus        86 a~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~-~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  161 (486)
T 1t90_A           86 AHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSL-MMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM  161 (486)
T ss_dssp             HHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHH-HCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred             HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHH-hcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence            999999999999998 48999999999998865443 333222210  12345688999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR  286 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~  286 (439)
                      +++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|+.+.++.|++  ++|+|+||||+.+|+.|++
T Consensus       162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~  237 (486)
T 1t90_A          162 FPMAIALGNTFILKPSERTPLLTEKLVELFEK----AGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK  237 (486)
T ss_dssp             HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHH----TTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999988888765    89999999999997788899988  7999999999999999999


Q ss_pred             HhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCce-eEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       287 ~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~-v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      .++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ ||+|+++|.++++++++|+|.
T Consensus       238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~  316 (486)
T 1t90_A          238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL  316 (486)
T ss_dssp             HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred             HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence            999999999999999999999999999999999999999999999999999 999999 999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++||++++.++++++++|++++++||++++||.+..   .+.|+|++|||+.+++++|++++||+||||+
T Consensus       317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~---~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl  387 (486)
T 1t90_A          317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVL  387 (486)
T ss_dssp             STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSC---CSSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCCEECCEEEeCCCCCCHhhcCcccCceE
Confidence            9999999999999999999999999999999999997531   2469999999999999999999999999985

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.4e-80  Score=644.90  Aligned_cols=378  Identities=25%  Similarity=0.361  Sum_probs=349.3

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .+++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   85 (485)
T 4dng_A            6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD   85 (485)
T ss_dssp             CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            35689999999988889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++. .|+..+++.++|+++..++. .....+.. ...+...+++++|+|||++|+|||||+...++
T Consensus        86 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  162 (485)
T 4dng_A           86 IIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMR  162 (485)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence            99999999999999995 59999999999999988753 33332211 01235678999999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHH-HHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~-~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      ++++||++||+||+|||+.+|+++ ..+.+++.    ++|+|+|++|+++|++ +.++.|++  ++|+|.||||+.+|+.
T Consensus       163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~  238 (485)
T 4dng_A          163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFE----HAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH  238 (485)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHH----HTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----HhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHH
Confidence            999999999999999999999999 87766655    5999999999999976 57889988  8999999999999999


Q ss_pred             HHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608          284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       284 v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~  363 (439)
                      |++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus       239 i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~  318 (485)
T 4dng_A          239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD  318 (485)
T ss_dssp             HHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred             HHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |.++++++||++++.++++++++|++++++||++++||.+       .|+|++|||+.+++++|++++||+||||+
T Consensus       319 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl  387 (485)
T 4dng_A          319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIA  387 (485)
T ss_dssp             TTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEE
T ss_pred             CCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceE
Confidence            9999999999999999999999999999999999999982       69999999999999999999999999985

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=8.1e-81  Score=645.46  Aligned_cols=379  Identities=25%  Similarity=0.377  Sum_probs=353.9

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus         7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~   86 (478)
T 3ty7_A            7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD   86 (478)
T ss_dssp             CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            35689999999988889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++...|+..+++.++|+++.+.++....        .....+++++|+|||++|+|||||+...++
T Consensus        87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  158 (478)
T 3ty7_A           87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSL  158 (478)
T ss_dssp             HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHH
Confidence            999999999999999967899999999999999888765432        123578899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+++|++ +.++.|+.  ++|+|+||||+.+|+.|
T Consensus       159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i  234 (478)
T 3ty7_A          159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDK----VGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKI  234 (478)
T ss_dssp             HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHH----HTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC-
T ss_pred             HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHH----hCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence            999999999999999999999999988887765    899999999999965 78899987  89999999999999999


Q ss_pred             HHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCC
Q 013608          285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP  364 (439)
Q Consensus       285 ~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~  364 (439)
                      ++.++++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       235 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  314 (478)
T 3ty7_A          235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP  314 (478)
T ss_dssp             -CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++++++|||+++.++++++++|++++++||++++||.... .....|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl  388 (478)
T 3ty7_A          315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVM  388 (478)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECcee
Confidence            99999999999999999999999999999999999995321 113579999999999999999999999999985

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=2.3e-80  Score=646.58  Aligned_cols=376  Identities=24%  Similarity=0.350  Sum_probs=349.3

Q ss_pred             cccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..+||+|+|+.+  +++++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++
T Consensus        38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e  115 (516)
T 1uzb_A           38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE  115 (516)
T ss_dssp             ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            457999999864  5789999999 6999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHH
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN  207 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~  207 (439)
                      |++++++|+||+..++. .|+..+++.++|++++++++..+......  ..+...+++++|+|||++|+|||||+...++
T Consensus       116 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  192 (516)
T 1uzb_A          116 LEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTG  192 (516)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence            99999999999999995 79999999999999998887654321111  1234678899999999999999999999999


Q ss_pred             HHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHH
Q 013608          208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI  284 (439)
Q Consensus       208 ~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v  284 (439)
                      ++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|.+ +.++.|++  ++|+|+||||+.+|+.|
T Consensus       193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i  268 (516)
T 1uzb_A          193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI  268 (516)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----HTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHH----hCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHH
Confidence            999999999999999999999999988887765    899999999999954 78899998  79999999999999999


Q ss_pred             HHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608          285 MRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS  358 (439)
Q Consensus       285 ~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~  358 (439)
                      ++.++      ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus       269 ~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~  348 (516)
T 1uzb_A          269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER  348 (516)
T ss_dssp             HHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred             HHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence            99998      889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608          359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV  438 (439)
Q Consensus       359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv  438 (439)
                      +++|+| ++++++|||+++.++++++++|++++++| ++++||...    ...|+|++|||+.+++++|++++||+||||
T Consensus       349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPV  422 (516)
T 1uzb_A          349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPV  422 (516)
T ss_dssp             CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred             ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCce
Confidence            999999 99999999999999999999999999999 999999742    136999999999999999999999999998


Q ss_pred             C
Q 013608          439 S  439 (439)
Q Consensus       439 ~  439 (439)
                      +
T Consensus       423 l  423 (516)
T 1uzb_A          423 L  423 (516)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=4.7e-80  Score=638.96  Aligned_cols=371  Identities=30%  Similarity=0.432  Sum_probs=346.5

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      ..+||+|+|+.+.+  +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|
T Consensus         5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el   82 (475)
T 1euh_A            5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI   82 (475)
T ss_dssp             CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            35799999998754  8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccc----cce-eEEEeeccEEEEEcCCCcchh
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH  203 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~----~~~-~~~~~PlGVv~~i~p~N~P~~  203 (439)
                      ++++++|+||+..++ ..|+..+++.++|++++++++.... .+..  ..+    ... +++++|+|||++|+|||||+.
T Consensus        83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~  158 (475)
T 1euh_A           83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN  158 (475)
T ss_dssp             HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred             HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence            999999999999998 5799999999999999888765432 1211  112    345 889999999999999999999


Q ss_pred             hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHH
Q 013608          204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV  280 (439)
Q Consensus       204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~  280 (439)
                      ..++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+|+|++ +.++.|++  ++|+|+||||+.+
T Consensus       159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~  234 (475)
T 1euh_A          159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE----AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI  234 (475)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH----HTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred             HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHH----hCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence            9999999999999999999999999999988888765    899999999999975 57888987  7999999999999


Q ss_pred             HHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       281 ~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      |+.|++.++  ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~  312 (475)
T 1euh_A          235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT  312 (475)
T ss_dssp             HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence            999999988  899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.+ ++++|||+++.++++++++|++++++|+++++||..       .|+|++|||+.+++++|++++||+||||+
T Consensus       313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl  383 (475)
T 1euh_A          313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVL  383 (475)
T ss_dssp             BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceE
Confidence            999999 999999999999999999999999999999999982       58999999999999999999999999985

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.7e-79  Score=636.77  Aligned_cols=375  Identities=21%  Similarity=0.301  Sum_probs=349.8

Q ss_pred             ccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 013608           50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC  129 (439)
Q Consensus        50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la  129 (439)
                      ++||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+
T Consensus         7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela   85 (490)
T 3ju8_A            7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA   85 (490)
T ss_dssp             CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            689999999874 5689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHH
Q 013608          130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM  209 (439)
Q Consensus       130 ~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i  209 (439)
                      +++++|+||+..++. .|+..+++.++|+++..+++......+    ......+++++|+|||++|+|||||+...++++
T Consensus        86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  160 (490)
T 3ju8_A           86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI  160 (490)
T ss_dssp             HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred             HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence            999999999999995 799999999999998877654433211    122456778999999999999999999999999


Q ss_pred             HHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHH
Q 013608          210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN  287 (439)
Q Consensus       210 ~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~  287 (439)
                      ++||++||+||+|||+.+|+++.++++++.+    +|+|+|++|+|+|+.+.++.|++  ++|+|+||||+.+|+.|++.
T Consensus       161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~  236 (490)
T 3ju8_A          161 VPALLAGNCVVFKPSELTPKVAELTLKAWIQ----AGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ  236 (490)
T ss_dssp             HHHHHHTCEEEEECCTTCHHHHHHHHHHHHH----TTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred             HHHHHcCCeEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence            9999999999999999999999988877665    89999999999997788999998  89999999999999999999


Q ss_pred             hhccCCce-EEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhh-HHHHHHHHHHHHHhCccCC-C
Q 013608          288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P  364 (439)
Q Consensus       288 aa~~l~pv-~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i-~d~f~~~L~~~~~~l~~G~-~  364 (439)
                      ++++++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|.++++++++|+ |
T Consensus       237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~  316 (490)
T 3ju8_A          237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD  316 (490)
T ss_dssp             TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred             hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence            99999998 7999999999999999999999999999999999999999999999996 9999999999999999999 9


Q ss_pred             CCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       365 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      .++++++|||+++.++++++++|++++++||++++||.+.+    ..|+|++|||+. ++++|++++||+||||+
T Consensus       317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl  386 (490)
T 3ju8_A          317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLL  386 (490)
T ss_dssp             CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEE
T ss_pred             CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEE
Confidence            99999999999999999999999999999999999998532    579999999998 99999999999999985

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=2.4e-79  Score=633.47  Aligned_cols=368  Identities=24%  Similarity=0.352  Sum_probs=343.4

Q ss_pred             CCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 013608           61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM  140 (439)
Q Consensus        61 ~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~  140 (439)
                      .+.++++++||+||+++++++.++++|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+.
T Consensus         3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   82 (474)
T 4h7n_A            3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS   82 (474)
T ss_dssp             CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred             CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence            35689999999999999999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEE
Q 013608          141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV  220 (439)
Q Consensus       141 ~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VV  220 (439)
                      .+  ..|+..+++.+++++....+++.....+...  .+...+.+++|+|||++|+|||||+...++++++||++||+||
T Consensus        83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV  158 (474)
T 4h7n_A           83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV  158 (474)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred             HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence            44  3699999999999999888877665544331  2345667889999999999999999999999999999999999


Q ss_pred             EecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcC
Q 013608          221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG  300 (439)
Q Consensus       221 lKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg  300 (439)
                      +|||+.+|+++..+.+++    .++|+|+|++|+++|+.+.+..|+..+|+|.||||+.+|+.|++.++++++|+++|||
T Consensus       159 lKps~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG  234 (474)
T 4h7n_A          159 VKPSEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG  234 (474)
T ss_dssp             EEECTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred             ecccccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence            999999999998776665    4599999999999998899999998999999999999999999999999999999999


Q ss_pred             CCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHH
Q 013608          301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS  380 (439)
Q Consensus       301 Gk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~  380 (439)
                      ||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus       235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~  314 (474)
T 4h7n_A          235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA  314 (474)
T ss_dssp             CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred             CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       381 ~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++++++++++|+++++||....   ...|+|++|||+.+++++|++++||+||||+
T Consensus       315 ~~v~~~i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl  370 (474)
T 4h7n_A          315 GIINDHILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIM  370 (474)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             HHHHHHHHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEE
Confidence            9999999999999999999998532   3579999999999999999999999999985

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=1.8e-78  Score=625.62  Aligned_cols=365  Identities=26%  Similarity=0.452  Sum_probs=343.3

Q ss_pred             CCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 013608           62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV  141 (439)
Q Consensus        62 ~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~  141 (439)
                      +..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..
T Consensus         5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~   84 (462)
T 3etf_A            5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK   84 (462)
T ss_dssp             -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred             ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            35679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEE
Q 013608          142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI  221 (439)
Q Consensus       142 ~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVl  221 (439)
                      +++ .|+..+++.++|+++..+++..+....    ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus        85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl  159 (462)
T 3etf_A           85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPTL----VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL  159 (462)
T ss_dssp             HHH-HHHHHHHHHHHHHHHHHHHHTSCEECS----SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred             HHH-HHHHHHHHHHHHHHHhHHHhcCCcccC----CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence            985 799999999999999988776554211    134567899999999999999999999999999999999999999


Q ss_pred             ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEc
Q 013608          222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL  299 (439)
Q Consensus       222 Kps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lel  299 (439)
                      |||+.+|+++..+.+++.+    +|+|+|++|+++|+++.++.|++  ++|+|+||||+.+|+.|++.++++++|+++|+
T Consensus       160 Kps~~tp~~~~~l~~~l~~----aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl  235 (462)
T 3etf_A          160 KHAPNVTGCAQMIARILAE----AGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL  235 (462)
T ss_dssp             ECCTTCHHHHHHHHHHHHH----TTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCCCcHHHHHHHHHHHH----hCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence            9999999999887777554    99999999999998888888987  89999999999999999999999999999999


Q ss_pred             CCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHH
Q 013608          300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH  379 (439)
Q Consensus       300 gGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~  379 (439)
                      |||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++|||+++.+
T Consensus       236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~  315 (462)
T 3etf_A          236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL  315 (462)
T ss_dssp             CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred             CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       380 ~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++++|++++++||++++||.+..    ..|+|++|||+.+++++|++++||+||||+
T Consensus       316 ~~~v~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl  371 (462)
T 3etf_A          316 RDELHQQVQASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVA  371 (462)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             HHHHHHHHHHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEE
Confidence            99999999999999999999998532    469999999999999999999999999985

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=2.2e-78  Score=634.71  Aligned_cols=379  Identities=19%  Similarity=0.224  Sum_probs=347.4

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh-
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH-  124 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~-  124 (439)
                      ..+.+||+|+|+.+.  ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++ 
T Consensus        62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~  139 (563)
T 4e3x_A           62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR  139 (563)
T ss_dssp             EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence            456699999999864  4678999998 899999999999999999999999999999999999999999999999999 


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++...|+..+++.++|+++.++++.........   .....+.+++|+|||++|+|||||+..
T Consensus       140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~  216 (563)
T 4e3x_A          140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIG  216 (563)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHH
Confidence            99999999999999999996544999999999999998887654322221   123345667778999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      ..+++++|| +||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  ++++|.||||+.+|
T Consensus       217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~e----AGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG  291 (563)
T 4e3x_A          217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILRE----AGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTF  291 (563)
T ss_dssp             HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred             HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHH----hCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence            999999999 69999999999999999988887665    899999999999976 57899987  99999999999999


Q ss_pred             HHHHHHhhccCCc------eEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHH
Q 013608          282 RMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI  355 (439)
Q Consensus       282 ~~v~~~aa~~l~p------v~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~  355 (439)
                      +.|++.++++++|      +++|||||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|.++
T Consensus       292 ~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~  371 (563)
T 4e3x_A          292 KHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEE  371 (563)
T ss_dssp             HHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHH
Confidence            9999999999985      9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-CCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccC
Q 013608          356 VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE  433 (439)
Q Consensus       356 ~~~l~~G~~-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E  433 (439)
                      ++++++|+| .++++++||+|++.++++++++|+++++ +||++++||...    ...|+|++|||+.+++++|++++||
T Consensus       372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eE  447 (563)
T 4e3x_A          372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEE  447 (563)
T ss_dssp             HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSC
T ss_pred             HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCC
Confidence            999999999 9999999999999999999999999996 899999999842    2479999999999999999999999


Q ss_pred             ccccCC
Q 013608          434 IILWVS  439 (439)
Q Consensus       434 ~FgPv~  439 (439)
                      +||||+
T Consensus       448 iFGPVl  453 (563)
T 4e3x_A          448 IFGPVL  453 (563)
T ss_dssp             CCSSEE
T ss_pred             CcCeEE
Confidence            999985

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=6e-77  Score=623.70  Aligned_cols=381  Identities=17%  Similarity=0.210  Sum_probs=338.0

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      ..+||+|+|+.+.+ .+++++||+||+++++++.++ +|+++++++|++| |+.|+.++..+|.++|+++++.|++|+++
T Consensus         8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e   85 (534)
T 2y53_A            8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD   85 (534)
T ss_dssp             CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            46899999997754 579999999999999999998 9999999999999 59999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC------CcccCCCccccccceeEEEeec-cEEEEEcCCCc
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY  200 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~Pl-GVv~~i~p~N~  200 (439)
                      |++++++|+||+..++. .|+..+++.++|++..+++...      ++..+... ......++.++|+ |||++|+||||
T Consensus        86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~  163 (534)
T 2y53_A           86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF  163 (534)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence            99999999999999985 6999999999999987755422      11111110 0111357889997 99999999999


Q ss_pred             chhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcC-CCCCcEEEEeCChh-hHHHHHhCcCEEEEeCCh
Q 013608          201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSP  278 (439)
Q Consensus       201 P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG-~p~~~v~~v~~~~~-~~~~L~~~v~~v~f~Gs~  278 (439)
                      |++..++++++||++||+||+|||+.+|+++..+++++.+    +| +|+|++|+|+|+.+ .++.| ..+|+|+||||+
T Consensus       164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~----aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~  238 (534)
T 2y53_A          164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVD----AGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA  238 (534)
T ss_dssp             TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHH----HTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred             HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHH----hCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence            9999999999999999999999999999999988887765    89 79999999998653 22222 278999999999


Q ss_pred             HHHHHHHHHhh--ccCCceEEEcCCCceEEecCCC-----CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHH
Q 013608          279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ  351 (439)
Q Consensus       279 ~~~~~v~~~aa--~~l~pv~lelgGk~~~iV~~da-----Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~  351 (439)
                      .+|+.|++.++  ++++|+++|||||||+||++||     |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus       239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  318 (534)
T 2y53_A          239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA  318 (534)
T ss_dssp             HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred             HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence            99999999875  8999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC--CCCCCCceeccEEEecCCCC--C
Q 013608          352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M  427 (439)
Q Consensus       352 L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~--~~~~~g~~~~PTvl~~v~~~--~  427 (439)
                      |.++++++++|+|.++++++|||+++.++++++++|+++ ++||++++||.....  +....|+|++|||+.+++++  |
T Consensus       319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~  397 (534)
T 2y53_A          319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT  397 (534)
T ss_dssp             HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred             HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence            999999999999999999999999999999999999999 689999999974311  11236999999999999987  6


Q ss_pred             cccccCccccCC
Q 013608          428 KLMQEEIILWVS  439 (439)
Q Consensus       428 ~i~~~E~FgPv~  439 (439)
                      ++++||+||||+
T Consensus       398 ~i~~eEiFGPVl  409 (534)
T 2y53_A          398 LLHDVEVFGPVA  409 (534)
T ss_dssp             STTTCCCSSSEE
T ss_pred             HHHhCCCcCCEE
Confidence            999999999985

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=6.1e-76  Score=648.06  Aligned_cols=377  Identities=21%  Similarity=0.335  Sum_probs=351.3

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCC-CcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      ...+||+|+|+.+  +++++++||+| |+++++++.++.+|+++++++|++||..|+.+|+.+|.++|+++++.|+++++
T Consensus       531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~  608 (1026)
T 4f9i_A          531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF  608 (1026)
T ss_dssp             EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4568999999874  67899999998 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||+..++ ..|+..+++.++|++..++++..+......   .+..+++.++|+|||++|+|||||+...+
T Consensus       609 eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~---~g~~~~~~~~PlGVV~~I~PwNfPl~i~~  684 (1026)
T 4f9i_A          609 ELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHA---PGELNHYFYEPKGVAAVIAPWNFPLAISM  684 (1026)
T ss_dssp             HHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCC---TTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCccceeEeecCceEEEeCCCccHHHHHH
Confidence            99999999999999999 479999999999999998887554332211   34567889999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+++++++    +|+|+|++|+|+|++ +.++.|++  .+++|+||||+.+|+.
T Consensus       685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~e----AGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~  760 (1026)
T 4f9i_A          685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFRE----AGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR  760 (1026)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----TTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHH----hCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence            9999999999999999999999999988887665    899999999999976 67899998  8999999999999999


Q ss_pred             HHHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       284 v~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |++.++      ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus       761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~  840 (1026)
T 4f9i_A          761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK  840 (1026)
T ss_dssp             HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence            999998      57899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++|+|.+.++++||+|++.++++++++|++++++| ++++||...    ...|+|++|||+.+++++|++++||+|||
T Consensus       841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP  915 (1026)
T 4f9i_A          841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP  915 (1026)
T ss_dssp             HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred             hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence            9999999999999999999999999999999999999 999999742    13499999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       916 Vl  917 (1026)
T 4f9i_A          916 VL  917 (1026)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=1.1e-75  Score=603.64  Aligned_cols=358  Identities=26%  Similarity=0.350  Sum_probs=318.1

Q ss_pred             CeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 013608           64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA  143 (439)
Q Consensus        64 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a  143 (439)
                      ...+++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..++
T Consensus         6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea   85 (457)
T 3lns_A            6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV   85 (457)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred             ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEec
Q 013608          144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV  223 (439)
Q Consensus       144 ~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKp  223 (439)
                      +.+|+..+++.++|++++++++..+...+......+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp  165 (457)
T 3lns_A           86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP  165 (457)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence            66799999999999999998887655443332223456789999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCC
Q 013608          224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK  302 (439)
Q Consensus       224 s~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk  302 (439)
                      |+.+|+++..+++++++    + +|+|++|+|+|+.+.++.|++ .+|+|+||||+.+|+.|++.++++++|+++|||||
T Consensus       166 s~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk  240 (457)
T 3lns_A          166 SETTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK  240 (457)
T ss_dssp             CTTCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred             CCCChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCC
Confidence            99999999999998877    4 999999999997788999998 99999999999999999999999999999999999


Q ss_pred             ceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHH
Q 013608          303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK  382 (439)
Q Consensus       303 ~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~  382 (439)
                      ||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++   |.++  ++|||+++.++++
T Consensus       241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r  315 (457)
T 3lns_A          241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR  315 (457)
T ss_dssp             EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred             CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999988   5555  9999999999999


Q ss_pred             HHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       383 ~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++|+++   ++++++||..     .+.|+|++|||+.+++++|++++||+||||+
T Consensus       316 v~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl  364 (457)
T 3lns_A          316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPIL  364 (457)
T ss_dssp             HHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEE
T ss_pred             HHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEE
Confidence            99999986   3599999974     2469999999999999999999999999985

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-75  Score=606.70  Aligned_cols=372  Identities=18%  Similarity=0.184  Sum_probs=335.9

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCCCcEee-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ....++||+|+|+.+.+     ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|
T Consensus        27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~  101 (528)
T 3v4c_A           27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR  101 (528)
T ss_dssp             CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence            34567899999998643     99999999998 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhh--hcCCccc---CCCccccccceeEEEeeccEEEEEcCCC
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWN  199 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~N  199 (439)
                      +++|++++++|+||+..++. +|+..+++.++|+++.+++  ++.....   +......+...+++++|+|||++|+|||
T Consensus       102 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN  180 (528)
T 3v4c_A          102 AEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN  180 (528)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence            99999999999999999884 7999999999999998876  3332211   1110012234678999999999999999


Q ss_pred             cchhhhH--HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEE
Q 013608          200 YPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIF  274 (439)
Q Consensus       200 ~P~~~~~--~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f  274 (439)
                      ||+...+  +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|.+ +.++.|++  .+|+|+|
T Consensus       181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f  260 (528)
T 3v4c_A          181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF  260 (528)
T ss_dssp             STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred             chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence            9998755  89999999999999999999999999999999999999999999999999965 78899988  8999999


Q ss_pred             eCChHHHHHHHHHhhccC--CceEEEcCCCceEEecCCC---CHHHHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHH
Q 013608          275 VGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALF  348 (439)
Q Consensus       275 ~Gs~~~~~~v~~~aa~~l--~pv~lelgGk~~~iV~~da---Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f  348 (439)
                      |||+.+|+.|++.+++++  +|+++|||||||+||++||   |++.|++.+++++|.|+||.|++++|||||++ +||+|
T Consensus       261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f  340 (528)
T 3v4c_A          261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF  340 (528)
T ss_dssp             ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred             ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence            999999999999999999  9999999999999999999   88999999999999999999999999999997 99999


Q ss_pred             HHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCC--
Q 013608          349 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT--  426 (439)
Q Consensus       349 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~--  426 (439)
                      +++|++++++++.|      +++||++++.+.++++++++   ++||++++||..       .|+|++|||+.+++++  
T Consensus       341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~  404 (528)
T 3v4c_A          341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFL  404 (528)
T ss_dssp             HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHH
T ss_pred             HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccc
Confidence            99999999999765      47899998887777777653   489999999982       6999999999988887  


Q ss_pred             -CcccccCccccCC
Q 013608          427 -MKLMQEEIILWVS  439 (439)
Q Consensus       427 -~~i~~~E~FgPv~  439 (439)
                       |++++||+||||+
T Consensus       405 ~~~i~~eEiFGPVl  418 (528)
T 3v4c_A          405 ADHALGEEVFGPLG  418 (528)
T ss_dssp             HCGGGGCCCSSSEE
T ss_pred             cChhhcccccCCeE
Confidence             9999999999985

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=3.2e-74  Score=593.39  Aligned_cols=342  Identities=28%  Similarity=0.415  Sum_probs=315.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHh
Q 013608           82 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE  161 (439)
Q Consensus        82 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~  161 (439)
                      ..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++++
T Consensus        14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~   93 (469)
T 3sza_A           14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK   93 (469)
T ss_dssp             ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566899999999999999999999999999999999999999999999999999999999778999999999999998


Q ss_pred             hhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHH
Q 013608          162 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA  241 (439)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~  241 (439)
                      ..++..+..............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ 
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-  172 (469)
T 3sza_A           94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-  172 (469)
T ss_dssp             HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH-
Confidence            8887765443322222345678999999999999999999999999999999999999999999999999999888776 


Q ss_pred             HHhcCCCCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHH
Q 013608          242 LAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA  320 (439)
Q Consensus       242 l~~aG~p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i  320 (439)
                         + +|+|++|+|+|+.+.+..|+. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+
T Consensus       173 ---a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i  248 (469)
T 3sza_A          173 ---Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI  248 (469)
T ss_dssp             ---H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred             ---h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence               4 899999999998777778888 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeC
Q 013608          321 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR  400 (439)
Q Consensus       321 ~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~g  400 (439)
                      ++++|.|+||.|++++|||||+++||+|+++|.++++++ .|++.++++++|||+++.++++++++|     +||++++|
T Consensus       249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G  322 (469)
T 3sza_A          249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG  322 (469)
T ss_dssp             HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred             HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence            999999999999999999999999999999999999998 699999999999999999999999998     69999999


Q ss_pred             CCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |..     ...|+|++|||+.+++++|++++||+||||+
T Consensus       323 G~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl  356 (469)
T 3sza_A          323 GTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVL  356 (469)
T ss_dssp             CCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             Ccc-----CCCCceeCCeeecCCCCcchhhhccccCCeE
Confidence            984     2469999999999999999999999999985

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=1e-73  Score=596.09  Aligned_cols=361  Identities=18%  Similarity=0.220  Sum_probs=328.1

Q ss_pred             CCCCCeEEeecCCCCcEe-eEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 013608           60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK  138 (439)
Q Consensus        60 ~~~~~~~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk  138 (439)
                      +.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||
T Consensus         3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk   82 (510)
T 1ez0_A            3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL   82 (510)
T ss_dssp             --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred             CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence            456778999999999999 7999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhhhhhHHHHHHHHHHHHHHhhhh--hcCCccc---CCCccccccceeEEEeeccEEEEEcCCCcchhhh--HHHHHH
Q 013608          139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA  211 (439)
Q Consensus       139 ~~~~a~~~Ei~~~~~~l~~~~~~~~~--~l~~~~~---~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~--~~~i~~  211 (439)
                      +..++ .+|+..+++.++|+++++++  ++.....   +..........+++++|+|||++|+|||||+...  .+++++
T Consensus        83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~  161 (510)
T 1ez0_A           83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS  161 (510)
T ss_dssp             CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred             CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence            99888 57999999999999998876  5443211   1100001113578999999999999999999874  499999


Q ss_pred             HHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHh
Q 013608          212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA  288 (439)
Q Consensus       212 AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~a  288 (439)
                      ||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|. .+.++.|++  .+|+|+||||+.+|+.|++.+
T Consensus       162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a  241 (510)
T 1ez0_A          162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA  241 (510)
T ss_dssp             HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999995 478899988  899999999999999999999


Q ss_pred             hccC--CceEEEcCCCceEEecCCCCHH--HHHHHHHHHHHhccCCCCCCCceeEEehh-hHHHHHHHHHHHHHhCccCC
Q 013608          289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       289 a~~l--~pv~lelgGk~~~iV~~daDl~--~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~-i~d~f~~~L~~~~~~l~~G~  363 (439)
                      ++++  +|+++|||||||+||++|||++  .|++.+++++|.|+||.|++++|||||++ +||+|+++|.++++++++  
T Consensus       242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~--  319 (510)
T 1ez0_A          242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP--  319 (510)
T ss_dssp             HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred             hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence            9986  9999999999999999999999  99999999999999999999999999999 999999999999999874  


Q ss_pred             CCCCCCcccccCCHHHHHHHHHHHHHHH-HCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCC---CcccccCccccCC
Q 013608          364 PLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEIILWVS  439 (439)
Q Consensus       364 ~~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~---~~i~~~E~FgPv~  439 (439)
                              ||++++.+.+++.++|++++ ++||++++||.        .|+|++|||+.+++++   |++++||+||||+
T Consensus       320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl  383 (510)
T 1ez0_A          320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS  383 (510)
T ss_dssp             --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred             --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence                    57888899999999999999 48999999997        1899999999988888   9999999999985

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=9e-69  Score=589.87  Aligned_cols=343  Identities=21%  Similarity=0.333  Sum_probs=319.6

Q ss_pred             ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHH
Q 013608           80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL  159 (439)
Q Consensus        80 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~  159 (439)
                      ++.++.+|+++++++|++||..|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++ ..|+..+++.++|++
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a  622 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA  622 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999999998 589999999999999


Q ss_pred             HhhhhhcCCcc-cCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608          160 SEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII  238 (439)
Q Consensus       160 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~  238 (439)
                      ...+++..... .+..   .+..++++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++
T Consensus       623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell  699 (1001)
T 3haz_A          623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL  699 (1001)
T ss_dssp             HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence            99887654321 2221   3457889999999999999999999999999999999999999999999999999888877


Q ss_pred             HHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc---CCceEEEcCCCceEEecCCCCH
Q 013608          239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV  313 (439)
Q Consensus       239 ~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~---l~pv~lelgGk~~~iV~~daDl  313 (439)
                      .+    +|+|+|++|+|+|+++.++.|++  ++|+|+||||+.+|+.|++.++++   ++|+++|+|||||+||++|||+
T Consensus       700 ~e----AGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl  775 (1001)
T 3haz_A          700 HE----AGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP  775 (1001)
T ss_dssp             HH----HTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred             HH----hCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence            66    79999999999998755999988  799999999999999999998864   8999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC
Q 013608          314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK  393 (439)
Q Consensus       314 ~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  393 (439)
                      +.|++.+++|+|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||||+..++++++++|++++++
T Consensus       776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~  855 (1001)
T 3haz_A          776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE  855 (1001)
T ss_dssp             HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       394 Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      | ++ +||...     ..|+|++|||+.+  ++|++++||+||||+
T Consensus       856 g-~v-~gg~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL  892 (1001)
T 3haz_A          856 A-RL-HFAGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPIL  892 (1001)
T ss_dssp             S-EE-EEECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEE
T ss_pred             C-eE-eccccC-----CCCcEEeeEEecC--CCHHHHhccccCcEE
Confidence            8 88 888742     3599999999974  789999999999985

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=2.6e-63  Score=512.34  Aligned_cols=332  Identities=18%  Similarity=0.202  Sum_probs=293.7

Q ss_pred             eEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHH
Q 013608           78 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW  157 (439)
Q Consensus        78 ~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~  157 (439)
                      ..++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|++++++|+||+..++...+...+++.+.+
T Consensus         4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~   83 (464)
T 3k9d_A            4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN   83 (464)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999999999999999999999999999988865566566665554


Q ss_pred             HHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHH
Q 013608          158 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI  237 (439)
Q Consensus       158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~  237 (439)
                      +.+... ...  ..+.   ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++
T Consensus        84 ~~~~~~-~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~l  157 (464)
T 3k9d_A           84 YIKDMK-TIG--MLKE---DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRI  157 (464)
T ss_dssp             HHTTCC-CSE--EEEE---ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred             hhhccc-ccc--eecc---CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHH
Confidence            443211 100  0110   1235678899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcC-CCceEEecCCCCH
Q 013608          238 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDV  313 (439)
Q Consensus       238 ~~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelg-Gk~~~iV~~daDl  313 (439)
                      +.+++.++|+|+|++|+|++. .+.++.|++  ++|+|+||||+.    +++.++++++|+ +|+| ||+|+||++|||+
T Consensus       158 l~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl  232 (464)
T 3k9d_A          158 ISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANI  232 (464)
T ss_dssp             HHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred             HHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence            999999999999999999995 578899998  799999999998    466778899999 7888 9999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHH-------HhCccCCCC-CCCCcccccCCHHHHHHHHH
Q 013608          314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQN  385 (439)
Q Consensus       314 ~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~Gpli~~~~~~~~~~  385 (439)
                      +.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++.       +++++|++. ++++++||+++.++++++.+
T Consensus       233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~  312 (464)
T 3k9d_A          233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN  312 (464)
T ss_dssp             HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999986       567889887 67889999999999999999


Q ss_pred             HHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          386 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       386 ~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++.+|+++++||..                  +++++|++. +|+||||+
T Consensus       313 ~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl  347 (464)
T 3k9d_A          313 LAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPIL  347 (464)
T ss_dssp             HTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEE
T ss_pred             HhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceE
Confidence            999999999999999972                  567888876 79999985

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=7.5e-63  Score=507.33  Aligned_cols=331  Identities=17%  Similarity=0.188  Sum_probs=284.3

Q ss_pred             ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHH-HHH
Q 013608           80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL  158 (439)
Q Consensus        80 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l-~~~  158 (439)
                      ++.++.+|+++++++|++||+.|+.++.++|.++|+++++.+++++++|++++++|+||+..++...|+..+.+.+ +|+
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~   80 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY   80 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999999999999999999999999999998655777777766 333


Q ss_pred             HHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHH
Q 013608          159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII  238 (439)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~  238 (439)
                      ..  .+...  ..+..   .....++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++
T Consensus        81 ~~--~~~~g--~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~  153 (452)
T 3my7_A           81 KD--EQTCG--ILEED---DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV  153 (452)
T ss_dssp             TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             hh--ccccc--cccCC---CCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence            32  11110  11111   2245688999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEEeCC-hhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHH
Q 013608          239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH  315 (439)
Q Consensus       239 ~~~l~~aG~p~~~v~~v~~~-~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~  315 (439)
                      ++++.++|+|+|++|++++. .+.++.|++  ++|+|+||||+.+    .+.++++++|+++|+|||||+||++|||++.
T Consensus       154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~  229 (452)
T 3my7_A          154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR  229 (452)
T ss_dssp             HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred             HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence            99999999999999999995 478999998  8999999999985    4567778999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCC
Q 013608          316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA  395 (439)
Q Consensus       316 aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga  395 (439)
                      |++.+++|+|.|+||.|++++|||||+++||+|+++|+++               +||+++++++++++++|+++.+.|+
T Consensus       230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a  294 (452)
T 3my7_A          230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA  294 (452)
T ss_dssp             HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred             HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence            9999999999999999999999999999999999999875               3999999999999999988777788


Q ss_pred             EEEeCCCCCCCCCCCCCceeccEE-------EecCCCCCcccccCccccCC
Q 013608          396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       396 ~~l~gG~~~~~~~~~~g~~~~PTv-------l~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++ +||..... ....|+|++||+       +.+++++|++++ |+||||+
T Consensus       295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl  342 (452)
T 3my7_A          295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTL  342 (452)
T ss_dssp             GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEE
T ss_pred             eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEE
Confidence            87 57652110 013599999997       668899999886 8999985

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.3e-63  Score=508.09  Aligned_cols=320  Identities=17%  Similarity=0.174  Sum_probs=253.4

Q ss_pred             EEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CC
Q 013608           66 VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GK  138 (439)
Q Consensus        66 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~-------Gk  138 (439)
                      --|+||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+       ||
T Consensus         9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk   88 (463)
T 2h5g_A            9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA   88 (463)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred             CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence            35889999999999999999999999999999999999999999999999999999999999999999999       69


Q ss_pred             Chh----hhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHH
Q 013608          139 TMV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF  214 (439)
Q Consensus       139 ~~~----~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~  214 (439)
                      ++.    ++ ..|+..+++.++|++++++++.... .+......+...+++++|+|||++|+||| |+... +++++||+
T Consensus        89 ~~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa  164 (463)
T 2h5g_A           89 PLLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA  164 (463)
T ss_dssp             HHHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred             chhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence            987    35 4799999999999999888776543 12111012335688999999999999887 76655 89999999


Q ss_pred             hCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccC
Q 013608          215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL  292 (439)
Q Consensus       215 aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l  292 (439)
                      +||+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|..+.++.|+.  ++|+|+||||+.+|+.|++.++  +
T Consensus       165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l  241 (463)
T 2h5g_A          165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--G  241 (463)
T ss_dssp             HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--S
T ss_pred             cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--C
Confidence            99999999999999999999999999998889 99999999995577888987  7999999999999999999988  9


Q ss_pred             CceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCccc
Q 013608          293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG  372 (439)
Q Consensus       293 ~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~G  372 (439)
                      +|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++||                         |
T Consensus       242 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~  295 (463)
T 2h5g_A          242 IPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------T  295 (463)
T ss_dssp             SCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------S
T ss_pred             CCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------h
Confidence            99999999999999999999999999999999999 999999999999999998                         3


Q ss_pred             ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          373 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       373 pli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+        +++++++++++||+++.||..     ...|+|+        +++|++++||+||||+
T Consensus       296 p~--------~~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl  341 (463)
T 2h5g_A          296 PL--------FDQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLEL  341 (463)
T ss_dssp             HH--------HHHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEE
T ss_pred             HH--------HHHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceE
Confidence            43        344688899999999866541     1235443        6799999999999974

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=4.6e-61  Score=494.87  Aligned_cols=310  Identities=16%  Similarity=0.157  Sum_probs=260.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhHHHH-HHHHHHHHHHh
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE  161 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~~~Ei~~-~~~~l~~~~~~  161 (439)
                      .+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+.    .++..+|+.. +++.++|+++.
T Consensus        15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~   94 (468)
T 1vlu_A           15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG   94 (468)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999999999998    7875589998 99999999998


Q ss_pred             hhhhcCCcccCCCcc-----c-cccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHH
Q 013608          162 GEKWLKPEYRSSGRS-----M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF  235 (439)
Q Consensus       162 ~~~~l~~~~~~~~~~-----~-~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~  235 (439)
                      ++++..... +.+..     . .+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++
T Consensus        95 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~  171 (468)
T 1vlu_A           95 IKDVAELED-PVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMA  171 (468)
T ss_dssp             HHHHHHSCC-SSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred             HHHHhhcCC-CCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHH
Confidence            887753322 11110     0 1235688999999999999999 9 899999999999999999999999999999999


Q ss_pred             HHHHHHHHh----cCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec
Q 013608          236 RIIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC  308 (439)
Q Consensus       236 ~~~~~~l~~----aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~  308 (439)
                      ++++++|.+    +|+|+|++|+|+ ++ +.++.|+.  .+|+|+||||+.+|+.|++.+   ++|+++|||||||+||+
T Consensus       172 ~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~  247 (468)
T 1vlu_A          172 KIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD  247 (468)
T ss_dssp             HHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC
T ss_pred             HHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEEC
Confidence            999999999    999999999999 65 67888887  799999999999999999887   69999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc---CCCCCCCCcccccCCHHHHHHHHH
Q 013608          309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQN  385 (439)
Q Consensus       309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~~~~  385 (439)
                      +|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++   |+|.+                 ++
T Consensus       248 ~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~  308 (468)
T 1vlu_A          248 EDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KT  308 (468)
T ss_dssp             TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HH
T ss_pred             CCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hc
Confidence            999999999999999999999 99999999999999 9999999999999987   87532                 44


Q ss_pred             H-HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          386 L-VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       386 ~-i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      + |++++    ++++||+         |  ++||++  ++++|++++||+||||+
T Consensus       309 ~~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl  346 (468)
T 1vlu_A          309 AYFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDL  346 (468)
T ss_dssp             HHHHHHH----HHTCCCH---------H--HHTTBC---------------CCCC
T ss_pred             ccccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceE
Confidence            5 67665    3667775         4  789997  78999999999999996

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=5e-57  Score=462.78  Aligned_cols=303  Identities=19%  Similarity=0.209  Sum_probs=248.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHH
Q 013608           85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE  153 (439)
Q Consensus        85 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~~-------~Ei~~~~~  153 (439)
                      .+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+||+.    .++..       .|+..+++
T Consensus        25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~  104 (444)
T 4ghk_A           25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE  104 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999985    35533       37888999


Q ss_pred             HHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHH
Q 013608          154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF  233 (439)
Q Consensus       154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~  233 (439)
                      .+++++...+.. . ...+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..
T Consensus       105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~  180 (444)
T 4ghk_A          105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA  180 (444)
T ss_dssp             HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred             HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence            999988765421 1 1111110012346788999999999999998 9 5888999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEEeCC-hh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecC
Q 013608          234 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD  309 (439)
Q Consensus       234 l~~~~~~~l~~aG~p~~~v~~v~~~-~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~  309 (439)
                      +++++.++|.++|+|+|++|+|+|. .+ .++.|..  ++|+|+||||+.+|+.|++.+   ++|+++|||||||+||++
T Consensus       181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~  257 (444)
T 4ghk_A          181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD  257 (444)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence            9999999999999999999999984 43 5677765  799999999999999999877   699999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc---CCCCCCCCcccccCCHHHHHHHHHH
Q 013608          310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL  386 (439)
Q Consensus       310 daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~---G~~~~~~~~~Gpli~~~~~~~~~~~  386 (439)
                      |||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++   |+|.                 ..++
T Consensus       258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~  319 (444)
T 4ghk_A          258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV  319 (444)
T ss_dssp             TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence            99999999999999999999 9999999999999999999999999999988   6542                 1356


Q ss_pred             HHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       387 i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |+++.                   .|      ++  ++++|++++||+||||+
T Consensus       320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl  345 (444)
T 4ghk_A          320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVL  345 (444)
T ss_dssp             HHHTT-------------------CC------CC--EECCSGGGTCC---CEE
T ss_pred             HHhcc-------------------cC------cc--cCCCchhhhccccCceE
Confidence            66542                   12      12  36789999999999985

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=1.9e-57  Score=463.64  Aligned_cols=302  Identities=19%  Similarity=0.183  Sum_probs=258.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhh-------hhHHHHHH
Q 013608           84 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDAS-------LGEIMTTC  152 (439)
Q Consensus        84 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~----~~a~-------~~Ei~~~~  152 (439)
                      --+++++++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+||+.    .++.       ..|+..++
T Consensus        12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~   91 (427)
T 1o20_A           12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI   91 (427)
T ss_dssp             --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence            345799999999999999999999999999999999999999999999999999985    5553       26899999


Q ss_pred             HHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHH
Q 013608          153 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC  232 (439)
Q Consensus       153 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~  232 (439)
                      +.++|+++..++ ... ..+......+...+++++|+|||++|+|||  +..+++++++||++||+||+|||+.+|+++.
T Consensus        92 ~~l~~~a~~~~~-~g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~  167 (427)
T 1o20_A           92 KACETVIGLKDP-VGE-VIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK  167 (427)
T ss_dssp             HHHHHHHHSCCC-TTC-EEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred             HHHHHHHhcccc-cCc-cccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence            999999987654 221 111100001234678999999999999886  4688999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCcEEEEeC-Chh-hHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEec
Q 013608          233 FYFRIIQAALAAVGAPENLVDVITG-FAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC  308 (439)
Q Consensus       233 ~l~~~~~~~l~~aG~p~~~v~~v~~-~~~-~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~  308 (439)
                      .+++++.++|.++|+|+|++|+|+| +.+ .++.|..  ++|+|+||||+.+|+.|++.+   ++|+++|||||||+||+
T Consensus       168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~  244 (427)
T 1o20_A          168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD  244 (427)
T ss_dssp             HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence            9999999999999999999999998 444 5677775  899999999999999999988   59999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013608          309 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN  388 (439)
Q Consensus       309 ~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~  388 (439)
                      +|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++                          
T Consensus       245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------  297 (427)
T 1o20_A          245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------  297 (427)
T ss_dssp             TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE--------------------------
T ss_pred             CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe--------------------------
Confidence            999999999999999999999 99999999999999999999999999998652                          


Q ss_pred             HHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          389 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       389 ~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                               ++||.+      ..| |+ |||   ++++|++++||+||||+
T Consensus       298 ---------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl  328 (427)
T 1o20_A          298 ---------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLII  328 (427)
T ss_dssp             ---------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEE
T ss_pred             ---------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceE
Confidence                     234431      113 33 895   35689999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	439
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-71
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-70
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	6e-70
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	8e-59
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-52
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-46
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-39
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	7e-35
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	1e-22
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-17
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-16

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  230 bits (588), Expect = 3e-71
 Identities = 104/391 (26%), Positives = 170/391 (43%), Gaps = 19/391 (4%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
           I+I     +  S  K   + PAT + L       + +VD+ V  AR+A ++   W     
Sbjct: 16  IFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDA 75

Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
            +R + L  L   I   + L+  + + + GK   +A L ++    + + +     +K   
Sbjct: 76  SERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG 135

Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
                 G    +        P+GV G I+ WN+P       +  A+  GN +V+K +E  
Sbjct: 136 RTIPMDGNFFTY----TRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 191

Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
             +      +I+ A    G P  +V+++ G+    G A+ S   VDK+ F GS  VG++I
Sbjct: 192 PLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247

Query: 285 MRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
              A K  L  V+LELGGK   IV  D D+ +  + A +      GQ C  A R +V   
Sbjct: 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 307

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           IY  FV +  +  K    G PL      G     E  EK+ +L+     +GA++   G  
Sbjct: 308 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG- 366

Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
              ++G    +  PTV  +V   M++ +EEI
Sbjct: 367 PWGNKGY---FIQPTVFSDVTDDMRIAKEEI 394

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  228 bits (583), Expect = 2e-70
 Identities = 104/370 (28%), Positives = 161/370 (43%), Gaps = 13/370 (3%)

Query: 69  YEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128
           +EPAT + L         EVD+ V  A+ A   W+K +  +R + +    + I E ++ I
Sbjct: 41  FEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNI 100

Query: 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHP 188
            ++   + GKT+      E     +     +               +      A     P
Sbjct: 101 AKLEVINNGKTI-----TEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREP 155

Query: 189 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 248
           LGV   I++WNYPF         A+  GN +V K S     +G     I   A    G P
Sbjct: 156 LGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----GVP 211

Query: 249 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 306
             LV+V+ G AETG  L     V K+ F GS   G+ +M  ++KT+  VTLELGGK   +
Sbjct: 212 VGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLL 271

Query: 307 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366
           +  D ++ +  + A+ A   + GQ C    R +V R+I   F+ +V K  K++  G PL 
Sbjct: 272 IFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331

Query: 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVN 424
            +  MG L      +K+   V  A  +GA +L  G     S+  +    +  P V+ N  
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391

Query: 425 HTMKLMQEEI 434
             M  ++EEI
Sbjct: 392 DDMTCVKEEI 401

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  227 bits (580), Expect = 6e-70
 Identities = 103/391 (26%), Positives = 165/391 (42%), Gaps = 19/391 (4%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKV---WAKSSF 107
           I+I        S        P+T + +       + +VD+ V  AR A ++   W +   
Sbjct: 16  IFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDA 75

Query: 108 KQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK 167
             R + L  L   I   +  +  + + D GK  V + L ++    + + +     +K+  
Sbjct: 76  SHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG 135

Query: 168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENA 227
                 G    +        P+GV G I+ WN+P       +  A+ +GN +V+KV+E  
Sbjct: 136 KTIPIDGDFFSY----TRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191

Query: 228 SWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMI 284
             +  +   +I+ A    G P  +V+++ GF    G A+ S   VDK+ F GS  +GR+I
Sbjct: 192 PLTALYVANLIKEA----GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVI 247

Query: 285 MRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 343
              A S  L  VTLELGGK   I+  D D+    + A  A   + GQ      R +V  D
Sbjct: 248 QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307

Query: 344 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403
           IY  FV +     KS   G P   K + G        +K+   +N    +GA++L  G  
Sbjct: 308 IYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367

Query: 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
                G    +  PTV  +V   M + +EEI
Sbjct: 368 -AADRGY---FIQPTVFGDVQDGMTIAKEEI 394

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  197 bits (502), Expect = 8e-59
 Identities = 94/388 (24%), Positives = 160/388 (41%), Gaps = 15/388 (3%)

Query: 51  IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQR 110
           + I     + + E     Y PAT   L      S  +VD  V  A  A   W +++ K R
Sbjct: 5   LLINGELVSGEGEK-QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63

Query: 111 RQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEY 170
            + L  L   I E+ ++  E+ SR+ GK +  A   EI    +   +             
Sbjct: 64  AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF---FAGAARCLNG 120

Query: 171 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 230
            ++G  +    + +   PLGVV +I  WNYP       +  A+ +GN +V+K SE    +
Sbjct: 121 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 180

Query: 231 GCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN 287
                 + +        P  +V+++ G     G+ L     V  +   GS   G  I+ +
Sbjct: 181 ALKLAELAKDIF-----PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 235

Query: 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 347
            + ++    +ELGGK   IV DD D+  V +        ++GQ+C  A R Y  + IY  
Sbjct: 236 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 295

Query: 348 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 407
            V ++   V ++ +G P     ++G L  L H E++   V +A   G   +  G      
Sbjct: 296 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 355

Query: 408 EGAVDQYFPPTVIVNVNHTMKLMQEEII 435
            G    Y+ PT++        ++Q+E+ 
Sbjct: 356 NGY---YYAPTLLAGALQDDAIVQKEVF 380

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  180 bits (458), Expect = 1e-52
 Identities = 95/347 (27%), Positives = 149/347 (42%), Gaps = 15/347 (4%)

Query: 88  VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 147
           + + V +AR+A       S + R Q L  L + I E+ + I    + D GK    +   E
Sbjct: 2   ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61

Query: 148 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207
           +    E++   + E   W + E  +  R        +   PLGVV  I +WNYPF+    
Sbjct: 62  VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121

Query: 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS 267
           PM+ AV +GN +++K SE +         +I             + V  G  ET E L  
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIP----QYMDQNLYLVVKGGVPETTELLKE 177

Query: 268 SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 327
             D I++ GS  VG+++M  A+K LTPVTLELGGK    V  D D+    +        +
Sbjct: 178 RFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237

Query: 328 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 387
           SGQ C   +       I    V ++ K +K    G       D G +    H ++++ L+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLI 296

Query: 388 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEI 434
           ++          + S           Y  PT++V+V+    +MQEEI
Sbjct: 297 DNQKVAHGGTWDQSSR----------YIAPTILVDVDPQSPVMQEEI 333

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  165 bits (418), Expect = 1e-46
 Identities = 104/380 (27%), Positives = 159/380 (41%), Gaps = 18/380 (4%)

Query: 57  GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRI 116
           G    SE +++ YEPA+   LG  PA+S  EVD   A A+KAQ  W   S+ +R  +L  
Sbjct: 10  GEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHK 69

Query: 117 LLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT-CEKITWLLSEGEKWLKPEYRSSGR 175
           +   ++  +E I  I S++  K    A    + T              +    E  S   
Sbjct: 70  VADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEA 129

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
           +   K A V   P+G+V AI  +NYP +   + +  A+ +GN I  K     S SG    
Sbjct: 130 ASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLA 189

Query: 236 RIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTL 292
                A    G P  + + ITG  +E G+ +V    V+ I F GS G+G  I + A   +
Sbjct: 190 EAFAEA----GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--M 243

Query: 293 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 352
            P+ LELGGKD+ IV +D D+   A+  +  A   SGQ C   +R  V   +    V ++
Sbjct: 244 RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKI 303

Query: 353 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 412
            + V +++ G P                 K  + V   ++   +  A        EG   
Sbjct: 304 REKVLALTIGNPEDDADITP-----LIDTKSADYVEGLINDANDKGATALTEIKREGN-- 356

Query: 413 QYFPPTVIVNVNHTMKLMQE 432
               P +   V   M+L  E
Sbjct: 357 -LICPILFDKVTTDMRLAWE 375

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  146 bits (370), Expect = 1e-39
 Identities = 88/374 (23%), Positives = 140/374 (37%), Gaps = 24/374 (6%)

Query: 71  PATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130
            A  + +G      +AE +  +  A KA K W     + R + L      +   +  +  
Sbjct: 59  SAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEA 118

Query: 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL- 189
               + GK  V+          E I ++       L+  Y +        +    F+   
Sbjct: 119 TLVYEVGKNWVE----ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPL 174

Query: 190 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 249
           G    I  WN+P       ++  V  GN ++ K +E+A   G   F I   A    G P 
Sbjct: 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA----GFPP 230

Query: 250 NLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA------SKTLTPVTLELG 300
            +V+ + G   E G  LV    +  I F GS  VG  I   A              +E G
Sbjct: 231 GVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETG 290

Query: 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360
           GK+A IV +  D    A+  V +A    GQ C+ A R  + +  Y   + +V K  + +S
Sbjct: 291 GKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350

Query: 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 420
            GP      D+G +   E   K+ + +    ++G  +L         EG    +  PTV 
Sbjct: 351 VGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIAPTVF 404

Query: 421 VNVNHTMKLMQEEI 434
             V    ++ QEEI
Sbjct: 405 TEVPPKARIAQEEI 418

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  133 bits (335), Expect = 7e-35
 Identities = 82/382 (21%), Positives = 142/382 (37%), Gaps = 12/382 (3%)

Query: 57  GRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLR 115
           G    S  +++   P  +  +    + SR EV+  +    K  +         +R   LR
Sbjct: 23  GEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLR 82

Query: 116 ILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR 175
                I  + ++  E+   + GK    A               L   +            
Sbjct: 83  KAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTY 142

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
             +  +  V   PLGVV AI  +NYP  +  N +  +   GN +V+K S +         
Sbjct: 143 DTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAV 202

Query: 236 RIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 293
           + +  A    G P + + ++    +  E +V+   V  + F GS  VG  +++     + 
Sbjct: 203 KALLDA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VK 256

Query: 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 353
              +ELGG D  IV +D D+   A    R     +GQ C   +     R +Y   V +VA
Sbjct: 257 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVA 316

Query: 354 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 413
           K + S+  G P     D+G L      +++   + DA++KG  +LA G     +     Q
Sbjct: 317 KRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV---Q 373

Query: 414 YFPPTVIVNVNHTMKLMQEEII 435
                   +    M L + E+ 
Sbjct: 374 PTLVEAPADRVKDMVLYKREVF 395

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 97.4 bits (241), Expect = 1e-22
 Identities = 46/303 (15%), Positives = 111/303 (36%), Gaps = 7/303 (2%)

Query: 87  EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT----MVD 142
           E+ E+  + R+A  V   ++ +++ + ++ + + + E ++ I E +  D  K     + +
Sbjct: 2   ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61

Query: 143 ASLGEIMTTCEKITWLLSEGEKWL---KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 199
           + +  +    ++I  ++   E  +    P        +     ++    + +    + + 
Sbjct: 62  SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE 121

Query: 200 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
              +      + A+ SGN I+++   +A  S       I+ AL     PE+ V+ I    
Sbjct: 122 SRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181

Query: 260 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 319
            +    +  + + + +  P  G  ++       T   LE G  +  I  D+      A  
Sbjct: 182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVP 241

Query: 320 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379
            +  A       C  AE+  VH  I   F+  + + ++          K       ++  
Sbjct: 242 VIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPA 301

Query: 380 SEK 382
           +E 
Sbjct: 302 TED 304

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.8 bits (201), Expect = 2e-17
 Identities = 48/319 (15%), Positives = 97/319 (30%), Gaps = 15/319 (4%)

Query: 86  AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD----TGKTMV 141
           +   +    ARKA  +    S + R   L  +   +  +   I E +  D        + 
Sbjct: 3   SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62

Query: 142 DASLGEI-MTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 197
           D+ L  + +   +K   +L   +   +   P  +      +     +      V   +V 
Sbjct: 63  DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122

Query: 198 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG----CFYFRIIQAALAAVGAPENLVD 253
           +      I N    ++ SGN  ++K  + +  +           I    +  G P   V 
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182

Query: 254 VITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 313
           +I    +  + L       + V       +     +    PV     G  +  + +D D+
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK-IPVLGHADGICSIYLDEDADL 241

Query: 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS--AGPPLAGKYDM 371
               +I++ A         A        +      V +   +   V+  A   L   Y  
Sbjct: 242 IKAKRISLDAKTNYPAGCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFD 301

Query: 372 GALCLLEHSEKLQNLVNDA 390
               L + +E +Q    DA
Sbjct: 302 KLNELGKLTEAIQCKTVDA 320

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 27/180 (15%), Positives = 57/180 (31%), Gaps = 7/180 (3%)

Query: 62  SETKVQCYEPATMKYLGY-FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKY 120
           ++         T + L   FP  +  EV++    A K  + + + +  +R   LR +   
Sbjct: 1   TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60

Query: 121 IIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGR 175
           +    + I   +  +T    V  + GEI  T  ++             + +      +  
Sbjct: 61  LEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRA 119

Query: 176 SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF 235
            +     + +   LG V    + N+P          A     G  + V  + +  G    
Sbjct: 120 PLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQI 179

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	439
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	92.95

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=3.4e-82  Score=656.69  Aligned_cols=380  Identities=27%  Similarity=0.420  Sum_probs=355.1

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHh
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEH  124 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~~~  124 (439)
                      ..++||+|+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+   .|+++|.++|.++|+++++.|++|
T Consensus        13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~   92 (494)
T d1bxsa_          13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD   92 (494)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence            34799999999998999999999999999999999999999999999999985   799999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       125 ~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      +++|++++++|+||+..++...|+..+++.++|++...++... +..+..   .....+++++|+|||++|+|||||+..
T Consensus        93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~  168 (494)
T d1bxsa_          93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQG-RTIPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLM  168 (494)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcc-eeecCC---CCceeEEEEccEEEEEEEeCccchhHH
Confidence            9999999999999999988678999999999999998776432 233322   245678899999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      +++++++||++||+||+|||+.+|+++.++++++++    +|+|+|++|+|+|++ +.++.|++  ++++|.||||+.+|
T Consensus       169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g  244 (494)
T d1bxsa_         169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKE----AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG  244 (494)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHH----HTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHH----hCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHH
Confidence            999999999999999999999999999988888766    799999999999975 67888987  89999999999999


Q ss_pred             HHHHHHhhc-cCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCc
Q 013608          282 RMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS  360 (439)
Q Consensus       282 ~~v~~~aa~-~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~  360 (439)
                      ++|++.+++ +++|+++|||||||+||++|||++.+++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       245 ~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~  324 (494)
T d1bxsa_         245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV  324 (494)
T ss_dssp             HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhee
Confidence            999999885 6999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       361 ~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      +|+|.++++++|||++++++++++++|++|+++||++++||.+.    ...|+|++|||+.+++++|++++||+||||+
T Consensus       325 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl  399 (494)
T d1bxsa_         325 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQ  399 (494)
T ss_dssp             BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             eeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCcc----CCCceeEcCEEEeCCCCCcHHHhccccCceE
Confidence            99999999999999999999999999999999999999999854    3579999999999999999999999999985

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=7.8e-82  Score=653.76  Aligned_cols=382  Identities=26%  Similarity=0.393  Sum_probs=356.3

Q ss_pred             CCCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHH
Q 013608           46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYII  122 (439)
Q Consensus        46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~l~~~l~  122 (439)
                      +..+++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+   .|+++++++|.++|+++++.|+
T Consensus        11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~   90 (494)
T d1o04a_          11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE   90 (494)
T ss_dssp             CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence            3455899999999998999999999999999999999999999999999999985   6999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcch
Q 013608          123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF  202 (439)
Q Consensus       123 ~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~  202 (439)
                      +|+++|++++++|+||+..++...|+..+++.++|+++...+.. .+..+..   .....+++|+|+|||++|+|||||+
T Consensus        91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~-~~~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~  166 (494)
T d1o04a_          91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH-GKTIPID---GDFFSYTRHEPVGVCGQIIPWNFPL  166 (494)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCC-EEEECCS---SSEEEEEEEEECCEEEEECCSSSHH
T ss_pred             HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhc-CceeccC---CCceeEEEEecccEEEEECCcccHH
Confidence            99999999999999999999877899999999999999887643 2333322   3356788999999999999999999


Q ss_pred             hhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChH
Q 013608          203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG  279 (439)
Q Consensus       203 ~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~  279 (439)
                      ...++++++||++||+||+|||+.+|.++.++.+++++    +|+|+|++|+|+|++ +.++.|+.  ++++|.||||++
T Consensus       167 ~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~----aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~  242 (494)
T d1o04a_         167 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKE----AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTE  242 (494)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHH
T ss_pred             HHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHH
Confidence            99999999999999999999999999999988887765    799999999999975 67899987  899999999999


Q ss_pred             HHHHHHHHhh-ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHh
Q 013608          280 VGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS  358 (439)
Q Consensus       280 ~~~~v~~~aa-~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~  358 (439)
                      +|++|++.++ ++++|+++|||||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|++.|.+++++
T Consensus       243 ~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~  322 (494)
T d1o04a_         243 IGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS  322 (494)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhh
Confidence            9999998776 789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccC
Q 013608          359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWV  438 (439)
Q Consensus       359 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv  438 (439)
                      +++|+|.++++++|||+++.++++++++|++|+++||++++||...    .+.|+|++|||+.+++++|++++||+||||
T Consensus       323 ~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPv  398 (494)
T d1o04a_         323 RVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPV  398 (494)
T ss_dssp             CCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred             eeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCce
Confidence            9999999999999999999999999999999999999999999853    357899999999999999999999999998


Q ss_pred             C
Q 013608          439 S  439 (439)
Q Consensus       439 ~  439 (439)
                      +
T Consensus       399 l  399 (494)
T d1o04a_         399 M  399 (494)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=3.1e-81  Score=650.00  Aligned_cols=386  Identities=28%  Similarity=0.392  Sum_probs=359.4

Q ss_pred             CCCCcccccCCcccCCCCCCeE-EeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 013608           45 TPDNSFIYIPPRGRTPQSETKV-QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIE  123 (439)
Q Consensus        45 ~~~~~~~~i~g~~~~~~~~~~~-~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~  123 (439)
                      .+.+..+||+|+|+.+.++.++ +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++
T Consensus        16 ~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~   95 (503)
T d1a4sa_          16 VVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRE   95 (503)
T ss_dssp             CCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence            3445568999999999877665 699999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchh
Q 013608          124 HQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH  203 (439)
Q Consensus       124 ~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~  203 (439)
                      |+++|++++++|+|||+.++ ..|+..+++.++|++....+.........    .+...+++++|+|||++|+|||||+.
T Consensus        96 ~~eela~~~~~etGkp~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~NfP~~  170 (503)
T d1a4sa_          96 RRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLP----GGAFAYTRREPLGVCAGILAWNYPFM  170 (503)
T ss_dssp             THHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECG----GGCEEEEEEEECSEEEEECCSSSHHH
T ss_pred             hHHHHHHHHHHhhhhcchhh-hhhhhhhhhcccccccccccccccccccC----CCcccccccccceeeecccCCCChHH
Confidence            99999999999999999999 47999999999999998776543322111    34568899999999999999999999


Q ss_pred             hhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHH
Q 013608          204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVG  281 (439)
Q Consensus       204 ~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~  281 (439)
                      ..++++++||++||+||+|||+.+|+++.++++++++    +|+|+|++|+|+|+.+.++.|++  ++|+|.||||+.+|
T Consensus       171 ~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G  246 (503)
T d1a4sa_         171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHE----AGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTG  246 (503)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----TTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----hCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHH
Confidence            9999999999999999999999999999988888765    89999999999998899999998  89999999999999


Q ss_pred             HHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCcc
Q 013608          282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA  361 (439)
Q Consensus       282 ~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~  361 (439)
                      ++|++.++++++|+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|++++.++++++++
T Consensus       247 ~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~  326 (503)
T d1a4sa_         247 KKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV  326 (503)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred             HHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       362 G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~--~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      |++.+..+++||++++.+++++++++++++++||++++||....  .+....|+|++||||.+++++|++++||+||||+
T Consensus       327 g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl  406 (503)
T d1a4sa_         327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM  406 (503)
T ss_dssp             SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred             ccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceE
Confidence            99999999999999999999999999999999999999998654  2345689999999999999999999999999985

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-78  Score=626.77  Aligned_cols=378  Identities=25%  Similarity=0.373  Sum_probs=342.9

Q ss_pred             cccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 013608           49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI  128 (439)
Q Consensus        49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l  128 (439)
                      +++||+|+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++|
T Consensus         3 ~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el   81 (474)
T d1wnda_           3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF   81 (474)
T ss_dssp             CCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             CccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Confidence            578999999987 5689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHH
Q 013608          129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP  208 (439)
Q Consensus       129 a~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~  208 (439)
                      ++++++|+||++.++...++..+.+..+|++...... ..  ...+....+...+++++|+|||++|+|||||+...+++
T Consensus        82 a~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  158 (474)
T d1wnda_          82 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCL-NG--LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  158 (474)
T ss_dssp             HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCC-EE--ECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHhCCChhHhhhcccccccccccccccccccc-cc--cccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence            9999999999999996556666666666655543322 11  11111123467889999999999999999999999999


Q ss_pred             HHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHH
Q 013608          209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM  285 (439)
Q Consensus       209 i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~  285 (439)
                      +++||++||+||+|||+.+|+++..++++++     .++|+|++|+|+|++ +.++.|++  +|+.|.||||+.+|+.|+
T Consensus       159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~-----~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~  233 (474)
T d1wnda_         159 LAPALAAGNCVVLKPSEITPLTALKLAELAK-----DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII  233 (474)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHT-----TTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHH-----HhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHH
Confidence            9999999999999999999999998888765     469999999999975 67899998  899999999999999999


Q ss_pred             HHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCC
Q 013608          286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL  365 (439)
Q Consensus       286 ~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~  365 (439)
                      +.++++++|+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||+++||+|++.|.++++++++|++.
T Consensus       234 ~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~  313 (474)
T d1wnda_         234 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD  313 (474)
T ss_dssp             HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTT
T ss_pred             HhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEE-eCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL-ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       366 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l-~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++++++||+++..+.+++.+++++++++||+.+ .||...    ...|+|++|||+.+++++|++++||+||||+
T Consensus       314 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~----~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl  384 (474)
T d1wnda_         314 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKR----KGNGYYYAPTLLAGALQDDAIVQKEVFGPVV  384 (474)
T ss_dssp             STTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBC----SSSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred             CCCceecccccccccchHHHHHHHHHHCCCeEEEeCCccc----CCCceEEeeeEeecccccccceeecccCCeE
Confidence            999999999999999999999999999999554 555432    3579999999999999999999999999985

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.1e-77  Score=621.31  Aligned_cols=377  Identities=23%  Similarity=0.340  Sum_probs=345.4

Q ss_pred             CcccccCCcccCCCCCCeEEeecCC-CCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE  126 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~  126 (439)
                      .+++||+|+|+.+  ++.++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++|++
T Consensus        37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~  114 (516)
T d1uzba_          37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR  114 (516)
T ss_dssp             EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            4679999999985  4678999995 799999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhH
Q 013608          127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF  206 (439)
Q Consensus       127 ~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~  206 (439)
                      +|++++++|+||++.++ ..|+..+++.+++++....+...+......  ......++.|+|+|||++|+|||||+..++
T Consensus       115 ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~  191 (516)
T d1uzba_         115 ELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFT  191 (516)
T ss_dssp             HHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhccccccc--ccccceeEEeeccCcccccccccccccccc
Confidence            99999999999999998 589999999999999987765443322221  134567788999999999999999999999


Q ss_pred             HHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHH
Q 013608          207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM  283 (439)
Q Consensus       207 ~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~  283 (439)
                      +++++||++||+||+|||+.+|+++..+.+++.+    +|+|+|++|+|+|++ +.++.|++  ++++|.||||+.+|+.
T Consensus       192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~  267 (516)
T d1uzba_         192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK  267 (516)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH----HTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             ccccchhhhcccccccccchhHHHHHHHHHHHHH----hCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHH
Confidence            9999999999999999999999999988777665    899999999999975 78899998  9999999999999999


Q ss_pred             HHHHhh------ccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       284 v~~~aa------~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |++.++      ++++|+++|||||||+||++|||++.|++.+++|+|.++||.|++++|+|||++++|+|++++.++++
T Consensus       268 i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~  347 (516)
T d1uzba_         268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAE  347 (516)
T ss_dssp             HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHH
Confidence            999987      67899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCcccc
Q 013608          358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILW  437 (439)
Q Consensus       358 ~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgP  437 (439)
                      ++++| |.++++++|||++..++++++++|++|+++|+++ +||.+.    ..+|+|++||||.+++++|++++||+|||
T Consensus       348 ~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP  421 (516)
T d1uzba_         348 RLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGP  421 (516)
T ss_dssp             TCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred             hcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcC----CCCCceECCEEEecCCCCchhhcCCCcCc
Confidence            99999 5578899999999999999999999999999766 566543    24699999999999999999999999999


Q ss_pred             CC
Q 013608          438 VS  439 (439)
Q Consensus       438 v~  439 (439)
                      |+
T Consensus       422 vl  423 (516)
T d1uzba_         422 VL  423 (516)
T ss_dssp             EE
T ss_pred             eE
Confidence            85

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=7.1e-72  Score=579.95  Aligned_cols=378  Identities=23%  Similarity=0.336  Sum_probs=343.1

Q ss_pred             CCcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhH
Q 013608           47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQ  125 (439)
Q Consensus        47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~l~~~l~~~~  125 (439)
                      +.+++||+|+|+.  ++++++++||.||+.+++++.++.+|+++|+++|++|++ .|+++|..+|.++|+++++.|++|+
T Consensus        15 ~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~   92 (499)
T d1ky8a_          15 PVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNL   92 (499)
T ss_dssp             EEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhH
Confidence            4478999999986  468999999999999999999999999999999988877 7999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccCC-CccccccceeEEEeeccEEEEEcCCCcchhh
Q 013608          126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN  204 (439)
Q Consensus       126 ~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~  204 (439)
                      ++|++++++|+|||..++ .+|+..+++.++|++...++......... .........+++|+|+|||++|+|||||+..
T Consensus        93 ~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~  171 (499)
T d1ky8a_          93 DVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD  171 (499)
T ss_dssp             HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchh
Confidence            999999999999999998 58999999999999998877644322221 1112345678999999999999999999999


Q ss_pred             hHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHH
Q 013608          205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       205 ~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      .++++++||++||+||+|||+.+|.++..+.+++.+    +|+|+++++++.+.++.+..|++  .++.+.||||..+++
T Consensus       172 ~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~----~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~  247 (499)
T d1ky8a_         172 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLD----AGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGE  247 (499)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHH----HTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHH
T ss_pred             hhhcchhhhcccccccccccccchhhhhhhcccccc----ccccceeeecccCChHHHHHHhhccceeEEEeecccccce
Confidence            999999999999999999999999999888777665    89999999999998888888887  999999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .+.+.++  .+|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|
T Consensus       248 ~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G  325 (499)
T d1ky8a_         248 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG  325 (499)
T ss_dssp             HHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred             EEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccC
Confidence            9999876  58999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEe---cCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~---~v~~~~~i~~~E~FgPv~  439 (439)
                      +|.++++++|||++.+++++++++|++|+++||++++||...      .+.++.++++.   ++.+||++++||+||||+
T Consensus       326 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl  399 (499)
T d1ky8a_         326 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVA  399 (499)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSEE
T ss_pred             CCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccc------cccccccccccccccCCCCChhhhccccCceE
Confidence            999999999999999999999999999999999999999842      33455555544   456799999999999985

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=7.3e-69  Score=554.50  Aligned_cols=375  Identities=30%  Similarity=0.421  Sum_probs=342.1

Q ss_pred             CcccccCCcccCCCCCCeEEeecCCCCcEeeEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 013608           48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL  127 (439)
Q Consensus        48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~  127 (439)
                      .++|||+|+|+.+  +++++++||+||+.+++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|++++++
T Consensus         3 ~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~   80 (474)
T d1euha_           3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK   80 (474)
T ss_dssp             BCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             cccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            4689999999875  57899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcCCcccC--CCccccccceeEEEeeccEEEEEcCCCcchhhh
Q 013608          128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRS--SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI  205 (439)
Q Consensus       128 la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~  205 (439)
                      |++++++|+||+..++ ..|+...+..++++..............  ......+...+++++|+|||++|+|||||+..+
T Consensus        81 la~~~~~e~Gk~~~~a-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~  159 (474)
T d1euha_          81 IGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA  159 (474)
T ss_dssp             HHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred             HHHHHHHHhCCCcchh-ccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence            9999999999999998 5799999999999888766543322211  112223455688999999999999999999999


Q ss_pred             HHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHH
Q 013608          206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR  282 (439)
Q Consensus       206 ~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~  282 (439)
                      +..+++||++||+||+|||+.+|+++.++.+++.+    +|+|+|++|+++|++ +.++.|+.  +++.|.||||..+++
T Consensus       160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~e----aglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~  235 (474)
T d1euha_         160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE----AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGE  235 (474)
T ss_dssp             HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH----HTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred             hhhchhhhhccccceecccccchHHHHHHHHHHHH----hCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCcccccc
Confidence            99999999999999999999999999988877665    899999999999985 68888987  899999999999999


Q ss_pred             HHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccC
Q 013608          283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG  362 (439)
Q Consensus       283 ~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G  362 (439)
                      .+.+.++  ++|+++|+||+||+||++|||++.+++.+++++|.++||.|+++++||||++++|+|++.++++...++.|
T Consensus       236 ~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~  313 (474)
T d1euha_         236 RIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  313 (474)
T ss_dssp             HHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             chhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence            9999876  78999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       363 ~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                      ++.+. .+++|++.....+++.+.+.++...|+..+.++.       ..|+|++|||+.++++||++++||+||||+
T Consensus       314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl  382 (474)
T d1euha_         314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVL  382 (474)
T ss_dssp             CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred             Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEE
Confidence            98764 4689999999999999999999999988876544       579999999999999999999999999985

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-66  Score=529.24  Aligned_cols=336  Identities=28%  Similarity=0.420  Sum_probs=307.6

Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHhhhhhcC
Q 013608           88 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK  167 (439)
Q Consensus        88 v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~Ei~~~~~~l~~~~~~~~~~l~  167 (439)
                      |+++|++|++||+.|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++..+|+..+++.+++++++..++..
T Consensus         2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~   81 (446)
T d1ad3a_           2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE   81 (446)
T ss_dssp             HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            78999999999999999999999999999999999999999999999999999999888999999999999998887766


Q ss_pred             CcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHHHHHHHHHHHHhcCC
Q 013608          168 PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA  247 (439)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~  247 (439)
                      +..............+++|+|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++++++++     ++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-----~~  156 (446)
T d1ad3a_          82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-----YM  156 (446)
T ss_dssp             CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-----HS
T ss_pred             ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-----cc
Confidence            5544433333455678899999999999999999999999999999999999999999999999988887754     68


Q ss_pred             CCCcEEEEeCChhhHHHHHh-CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCceEEecCCCCHHHHHHHHHHHHHh
Q 013608          248 PENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ  326 (439)
Q Consensus       248 p~~~v~~v~~~~~~~~~L~~-~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~~iV~~daDl~~aa~~i~~~~f~  326 (439)
                      |+++++++.+.......+.. .+|+|.||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~  236 (446)
T d1ad3a_         157 DQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM  236 (446)
T ss_dssp             CTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHT
T ss_pred             cccccccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhc
Confidence            99999999998766666767 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC
Q 013608          327 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL  406 (439)
Q Consensus       327 ~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~  406 (439)
                      ++||.|++++|||||+++||+|+++|.++++.+ +|++.++++++||++++.++++++.++++     ++...|+..   
T Consensus       237 ~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~---  307 (446)
T d1ad3a_         237 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW---  307 (446)
T ss_dssp             TTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE---
T ss_pred             CCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceee---
Confidence            999999999999999999999999999999988 89999999999999999999999888754     455555542   


Q ss_pred             CCCCCCceeccEEEecCCCCCcccccCccccCC
Q 013608          407 SEGAVDQYFPPTVIVNVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       407 ~~~~~g~~~~PTvl~~v~~~~~i~~~E~FgPv~  439 (439)
                        ...++|++|||+.+++++|++++||+||||+
T Consensus       308 --~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl  338 (446)
T d1ad3a_         308 --DQSSRYIAPTILVDVDPQSPVMQEEIFGPVM  338 (446)
T ss_dssp             --ETTTTEECCEEECSCCTTSGGGTSCCCSSEE
T ss_pred             --cCCCCCcCCEEEECCCCCCHHHhCcccCcce
Confidence              3568899999999999999999999999985

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=5.5e-66  Score=535.26  Aligned_cols=359  Identities=17%  Similarity=0.189  Sum_probs=309.6

Q ss_pred             CCeEEeecCCCCcEee-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 013608           63 ETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV  141 (439)
Q Consensus        63 ~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~  141 (439)
                      +++++++||+|||.|+ +++.++.+||++|+++|++||+.|++++.++|.++|+++++.|++|+++|++++++|+|||..
T Consensus         2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~   81 (504)
T d1ez0a_           2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV   81 (504)
T ss_dssp             CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred             CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            5689999999999997 799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhcCCccc-----CCCccccccceeEEEeeccEEEEEcCCCcchhhh--HHHHHHHHH
Q 013608          142 DASLGEIMTTCEKITWLLSEGEKWLKPEYR-----SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVF  214 (439)
Q Consensus       142 ~a~~~Ei~~~~~~l~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~--~~~i~~AL~  214 (439)
                      ++ .+|+..+++.++|+++...+....+..     +..........+.+++|+|||++|+|||||+...  ..++++||+
T Consensus        82 ~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALa  160 (504)
T d1ez0a_          82 RL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA  160 (504)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHH
Confidence            98 589999999999999887665433221     1111123456678899999999999999998644  468999999


Q ss_pred             hCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHh--CcCEEEEeCChHHHHHHHHHhhcc
Q 013608          215 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT  291 (439)
Q Consensus       215 aGN~VVlKps~~~~~s~~~l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~  291 (439)
                      +||+||+|||+.+|.++.++.+++.+++.++|+|+|++|+|+|++ +.++.|++  ++++|+||||+.+|+.|.+.++++
T Consensus       161 aGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~  240 (504)
T d1ez0a_         161 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER  240 (504)
T ss_dssp             HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred             HhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence            999999999999999999999999999999999999999999975 67899988  999999999999999999999999


Q ss_pred             CCceEE--EcCCCceEEecCCCCHHHHH--HHHHHHHHhccCCCCCCCceeEEehhhHH-HHHHHHHHHHHhCccCCCCC
Q 013608          292 LTPVTL--ELGGKDAFIVCDDVDVPHVA--QIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLA  366 (439)
Q Consensus       292 l~pv~l--elgGk~~~iV~~daDl~~aa--~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d-~f~~~L~~~~~~l~~G~~~~  366 (439)
                      ++|+.+  |||||||+||++|||++.|+  +.++.++|.|+||.|++++|+||+++.++ .|++.+.+.++..      +
T Consensus       241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~  314 (504)
T d1ez0a_         241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------S  314 (504)
T ss_dssp             SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------C
T ss_pred             cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------c
Confidence            987654  99999999999999999874  47899999999999999999998877554 6777777766643      2


Q ss_pred             CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCCCceeccEEEe---cCCCCCcccccCccccCC
Q 013608          367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEIILWVS  439 (439)
Q Consensus       367 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gG~~~~~~~~~~g~~~~PTvl~---~v~~~~~i~~~E~FgPv~  439 (439)
                      +++++||+++..+++++   ++.+.+.|+++++||..        +.+..|+++.   ++..+|++++||+||||+
T Consensus       315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl  379 (504)
T d1ez0a_         315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE--------SPCVASALFVTSSENWRKHPAWEEEIFGPQS  379 (504)
T ss_dssp             CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--------TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred             cccccccchhhhhhhhh---hhhhhhhhhhccccccc--------ccccCCccccccccccccchhhcccccCCee
Confidence            46789999988887665   66778889999888762        3344555554   344578999999999985

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.1e-47  Score=382.48  Aligned_cols=271  Identities=16%  Similarity=0.177  Sum_probs=223.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhH------------HHHHHH
Q 013608           86 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE------------IMTTCE  153 (439)
Q Consensus        86 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d~Gk~~~~a~~~E------------i~~~~~  153 (439)
                      +|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+||+..++ ++|            +...++
T Consensus         1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~~~   79 (414)
T d1o20a_           1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEMIK   79 (414)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999999998776 344            344455


Q ss_pred             HHHHHHHhhhhhcCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchHHHHH
Q 013608          154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF  233 (439)
Q Consensus       154 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~s~~~  233 (439)
                      .+++++...... .....+   ........+.++|+||++++.|||||+..+++++++||++||+||+|||+.+|.++.+
T Consensus        80 ~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~  155 (414)
T d1o20a_          80 ACETVIGLKDPV-GEVIDS---WVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA  155 (414)
T ss_dssp             HHHHHHHSCCCT-TCEEEE---EECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred             HHHHHHHhhhhc-cccccc---cccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence            555555433221 111111   0122345678899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCcEEEEeCCh-hhHHHHHhCcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCce-EEecCCC
Q 013608          234 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA-FIVCDDV  311 (439)
Q Consensus       234 l~~~~~~~l~~aG~p~~~v~~v~~~~-~~~~~L~~~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~~-~iV~~da  311 (439)
                      +++++++++...|+|.++++.+.+.. +....+. ..+.+.|+||...++.+.+.++++++++++|+||+|+ +||++||
T Consensus       156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dA  234 (414)
T d1o20a_         156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMI-RLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESA  234 (414)
T ss_dssp             HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT-TCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTS
T ss_pred             hhhHHHhhhhhccccccccccccccchhhhhhcc-cccccCeEEEcccHHHHHHHhhhccccceecccCCCCCeeccccc
Confidence            99999999999999999999988754 4444443 3444555566666677788888888999999988765 7788999


Q ss_pred             CHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHHhCccCC
Q 013608          312 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP  363 (439)
Q Consensus       312 Dl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~~l~~G~  363 (439)
                      |++.|++.++.+.|.| ||.|++++|++||+++||+|++.|.+..++..++.
T Consensus       235 d~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~  285 (414)
T d1o20a_         235 DLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEV  285 (414)
T ss_dssp             CHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             chhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcc
Confidence            9999999999999877 99999999999999999999999999988875543

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.4e-38  Score=315.97  Aligned_cols=258  Identities=18%  Similarity=0.165  Sum_probs=199.8

Q ss_pred             HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------cCCChhhhhhh--------HHHHHH
Q 013608           87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRD------TGKTMVDASLG--------EIMTTC  152 (439)
Q Consensus        87 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~l~~~l~~~~~~la~~~~~d------~Gk~~~~a~~~--------Ei~~~~  152 (439)
                      ++++++++|++|++.|+.+|.++|.++|+++++.|++|+++|+++..+|      .|++  ++..+        .+...+
T Consensus         4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~--~~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA--DSLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCC--HHHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCc--HHHHHHHhcCchHHHHHHH
Confidence            4678899999999999999999999999999999999999999865554      3443  22111        133333


Q ss_pred             HHHHHHHHhhhhh---cCCcccCCCccccccceeEEEeeccEEEEEcCCCcchhhhHHHHHHHHHhCCEEEEecCCCchH
Q 013608          153 EKITWLLSEGEKW---LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASW  229 (439)
Q Consensus       153 ~~l~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~PlGVv~~i~p~N~P~~~~~~~i~~AL~aGN~VVlKps~~~~~  229 (439)
                      +.++..++..+..   +....++.     +...+..+.|+||+++| |||+| ..++...+.||++||+||+||++.++.
T Consensus        82 ~~l~~i~~~~dpvg~~~~~~~~~~-----gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~  154 (436)
T d1vlua_          82 QGIKDVAELEDPVGKVKMARELDD-----GLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVN  154 (436)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEET-----TEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHH
T ss_pred             HHHHHHHhccccceeEeeeeeccc-----cceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCccccc
Confidence            4444443321110   11111122     23456678999999988 66778 566778888999999999999999999


Q ss_pred             HHHHHHHHHH----HHHHhcCCCCCcEEEEeCChhhHHHHHh--CcCEEEEeCChHHHHHHHHHhhccCCceEEEcCCCc
Q 013608          230 SGCFYFRIIQ----AALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD  303 (439)
Q Consensus       230 s~~~l~~~~~----~~l~~aG~p~~~v~~v~~~~~~~~~L~~--~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~lelgGk~  303 (439)
                      |+..++++++    +++.++|+|++++|++++..+.++.|..  .+|.|+||||...++.+.+.+.   +|++.++||++
T Consensus       155 s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~  231 (436)
T d1vlua_         155 TFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGIC  231 (436)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCE
T ss_pred             CHHHHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCcc
Confidence            9999888876    5566789999999999987677777766  8999999999999888877764   69999999999


Q ss_pred             eEEecCCCCHHHHHHHHHHHHHhccCCCCCCCceeEEehhhHHHHHHHHHHHHH
Q 013608          304 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK  357 (439)
Q Consensus       304 ~~iV~~daDl~~aa~~i~~~~f~~~GQ~C~~~~~v~V~~~i~d~f~~~L~~~~~  357 (439)
                      |+||++|||++.|++.++.++|+++|| |++.++++||+++++.|...+....+
T Consensus       232 ~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~  284 (436)
T d1vlua_         232 SIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLE  284 (436)
T ss_dssp             EEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHH
T ss_pred             ceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHh
Confidence            999999999999999999999999996 99999999999999888665555444

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=92.95  E-value=3.7  Score=38.39  Aligned_cols=162  Identities=16%  Similarity=0.116  Sum_probs=96.5

Q ss_pred             ccceeEEEeeccEEEEEcCCC---cchhhhHHHHHHHHHhCCEEEEecCC--CchHHHHHHHHHHHHHHHhcCCCCCcEE
Q 013608          179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD  253 (439)
Q Consensus       179 ~~~~~~~~~PlGVv~~i~p~N---~P~~~~~~~i~~AL~aGN~VVlKps~--~~~~s~~~l~~~~~~~l~~aG~p~~~v~  253 (439)
                      +.....++.|+--|++.+|..   ||- +++...+||-.||..=|+-++|  ..|..   +     -+.+.+|..    .
T Consensus       111 Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l-----~aa~~~Gv~----~  177 (431)
T d1k75a_         111 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---L-----YAAQLCGVQ----D  177 (431)
T ss_dssp             TEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---H-----HHHHHTTCC----E
T ss_pred             CceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcchH---H-----HHHHHcCcc----c
Confidence            345566889999999999975   664 4556688999999876554443  33322   1     112336765    2


Q ss_pred             EEeCCh-hhHHHHHh------CcCEEEEeCChHHHHHHHHHhhccCCceEE-EcCCCce-EEec-CCCCHHHHHHHHHHH
Q 013608          254 VITGFA-ETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL-ELGGKDA-FIVC-DDVDVPHVAQIAVRA  323 (439)
Q Consensus       254 ~v~~~~-~~~~~L~~------~v~~v~f~Gs~~~~~~v~~~aa~~l~pv~l-elgGk~~-~iV~-~daDl~~aa~~i~~~  323 (439)
                      +..-.+ +...+|.-      +||+|+=.|+.-|...=.+-..+.. .|-. -+.|.+= +||. +++|.+.++..++--
T Consensus       178 iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQ  256 (431)
T d1k75a_         178 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ  256 (431)
T ss_dssp             EEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred             eEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHhc
Confidence            333233 55555543      8999999999876544333322211 1211 2334443 3443 348999999888866


Q ss_pred             HHhccCCCCCCCceeEEe--hhhHHHHHHHHHHHHHhC
Q 013608          324 ALQSSGQNCAGAERFYVH--RDIYALFVSQVAKIVKSV  359 (439)
Q Consensus       324 ~f~~~GQ~C~~~~~v~V~--~~i~d~f~~~L~~~~~~l  359 (439)
                      +=+...     .+.++|.  ++..+++.+.+.+.++.+
T Consensus       257 AEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l  289 (431)
T d1k75a_         257 AEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL  289 (431)
T ss_dssp             HTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred             cCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhc
Confidence            555443     3445665  456677777777766654