Citrus Sinensis ID: 013645

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MESVDSRDEEAPLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccccccccc
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHcccHHHHHcHHHHHHccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
mesvdsrdeeaplvadslqvltpknytrdVHILSCAFLLIFLAYGAaqnlettvntegnlgtISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANlfpswytmvpasLYLGFAASIIWVGEGTYLTAAALSHasnhklhegtvigsfngefwgmfashQFVGNLITLAVlkddkggstsgtTLLFIVFLGVITLGTILMCFLRkeedkgeketadASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEivtpalgvsgvggaMAVYGAFDAICSLAAgrlttglpsitfIVSGGAIAQVVVFLWILINYSvtsgvlgtLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEkafysprs
mesvdsrdeeaplvadslqvltpknYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQvekafysprs
MESVDSRDEEAPLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
***************DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK**********DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFY****
*************************YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK****************YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI***********
************LVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE********ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
***********************KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE************NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK*******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
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MESVDSRDEEAPLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query439 2.2.26 [Sep-21-2011]
Q94AA1464 UNC93-like protein 3 OS=A no no 0.933 0.883 0.733 1e-170
Q86WB7457 Protein unc-93 homolog A no no 0.872 0.838 0.301 3e-38
Q6DDL7460 Protein unc-93 homolog A N/A no 0.858 0.819 0.286 2e-37
Q710D3458 Protein unc-93 homolog A yes no 0.876 0.840 0.293 4e-35
Q5SPF7465 Protein unc-93 homolog A yes no 0.915 0.864 0.277 7e-35
Q9Y115538 UNC93-like protein OS=Dro yes no 0.917 0.749 0.271 5e-34
Q93380705 Putative potassium channe yes no 0.933 0.581 0.268 1e-32
A2VE54457 Protein unc-93 homolog A yes no 0.856 0.822 0.288 3e-32
O43934449 UNC93-like protein MFSD11 no no 0.890 0.870 0.265 2e-22
Q8BJ51449 UNC93-like protein MFSD11 no no 0.856 0.837 0.266 9e-22
>sp|Q94AA1|UN933_ARATH UNC93-like protein 3 OS=Arabidopsis thaliana GN=At3g09470 PE=2 SV=1 Back     alignment and function desciption
 Score =  597 bits (1538), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 306/417 (73%), Positives = 348/417 (83%), Gaps = 7/417 (1%)

Query: 1   MESVDSRDEEAPLVA---DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE 57
           MES +  DEEAPL++   +  +V   K YTRDVHILS +FLLIFLAYGAAQNLETTVN +
Sbjct: 1   MESRN--DEEAPLISASGEDRKVRAGKCYTRDVHILSISFLLIFLAYGAAQNLETTVNKD 58

Query: 58  GNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPA 117
             LGTISLGILY SF   S+VASLVVR++GSKNAL+LGTTGYWLFVAANL PSW+TMVPA
Sbjct: 59  --LGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPA 116

Query: 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177
           SLYLGFAASIIWVG+GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLIT
Sbjct: 117 SLYLGFAASIIWVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLIT 176

Query: 178 LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVS 237
           LA+LKD K GSTSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L S
Sbjct: 177 LALLKDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLAS 236

Query: 238 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFD 297
           L + I T L D+RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA D
Sbjct: 237 LPRMIITPLLDIRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALD 296

Query: 298 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 357
           A+CS+ AGR T+GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGI
Sbjct: 297 AVCSMTAGRFTSGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGI 356

Query: 358 GDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 414
           GDG+LNTQ+SALL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V
Sbjct: 357 GDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLV 413

Arabidopsis thaliana (taxid: 3702)
>sp|Q86WB7|UN93A_HUMAN Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A PE=2 SV=1 Back     alignment and function description
>sp|Q6DDL7|UN93A_XENLA Protein unc-93 homolog A OS=Xenopus laevis GN=unc93a PE=2 SV=1 Back     alignment and function description
>sp|Q710D3|UN93A_MOUSE Protein unc-93 homolog A OS=Mus musculus GN=Unc93a PE=2 SV=1 Back     alignment and function description
>sp|Q5SPF7|UN93A_DANRE Protein unc-93 homolog A OS=Danio rerio GN=unc93a PE=3 SV=1 Back     alignment and function description
>sp|Q9Y115|UN93L_DROME UNC93-like protein OS=Drosophila melanogaster GN=CG4928 PE=2 SV=1 Back     alignment and function description
>sp|Q93380|UNC93_CAEEL Putative potassium channel regulatory protein unc-93 OS=Caenorhabditis elegans GN=unc-93 PE=1 SV=4 Back     alignment and function description
>sp|A2VE54|UN93A_BOVIN Protein unc-93 homolog A OS=Bos taurus GN=UNC93A PE=2 SV=1 Back     alignment and function description
>sp|O43934|MFS11_HUMAN UNC93-like protein MFSD11 OS=Homo sapiens GN=MFSD11 PE=2 SV=2 Back     alignment and function description
>sp|Q8BJ51|MFS11_MOUSE UNC93-like protein MFSD11 OS=Mus musculus GN=Mfsd11 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
359481565444 PREDICTED: UNC93-like protein-like [Viti 1.0 0.988 0.749 0.0
255581050439 conserved hypothetical protein [Ricinus 1.0 1.0 0.744 0.0
30680880437 UNC93-like protein [Arabidopsis thaliana 0.979 0.983 0.720 1e-173
51971130437 unnamed protein product [Arabidopsis tha 0.979 0.983 0.718 1e-173
297833712437 hypothetical protein ARALYDRAFT_317751 [ 0.977 0.981 0.728 1e-172
224087399442 predicted protein [Populus trichocarpa] 0.995 0.988 0.725 1e-172
30680871464 UNC93-like protein [Arabidopsis thaliana 0.933 0.883 0.733 1e-168
449439988430 PREDICTED: UNC93-like protein 3-like [Cu 0.972 0.993 0.693 1e-164
449530173430 PREDICTED: UNC93-like protein 3-like [Cu 0.972 0.993 0.693 1e-164
449439994430 PREDICTED: UNC93-like protein 3-like [Cu 0.972 0.993 0.679 1e-159
>gi|359481565|ref|XP_002273762.2| PREDICTED: UNC93-like protein-like [Vitis vinifera] gi|147782828|emb|CAN76819.1| hypothetical protein VITISV_029718 [Vitis vinifera] gi|297741472|emb|CBI32604.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/439 (74%), Positives = 380/439 (86%)

Query: 1   MESVDSRDEEAPLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNL 60
           M+SVDSRDEE+PLV    Q  T +N+TRDVHILSC+FLLIFLAYGA QNLE++VNT+ +L
Sbjct: 1   MDSVDSRDEESPLVVSDSQSKTLQNHTRDVHILSCSFLLIFLAYGATQNLESSVNTDEDL 60

Query: 61  GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLY 120
           GTI+LGILY SFT FSL+ASLVVR++GSKNALILGTTGYWLF+AANL P W TMVPAS+Y
Sbjct: 61  GTIALGILYLSFTIFSLIASLVVRMMGSKNALILGTTGYWLFMAANLKPRWSTMVPASVY 120

Query: 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180
           LGFAAS+IWVG+GTYLTA A SHA+++ LHEGTVIG+FNGEFWGMFASHQF GNLITLA+
Sbjct: 121 LGFAASVIWVGQGTYLTATARSHANDNNLHEGTVIGNFNGEFWGMFASHQFAGNLITLAL 180

Query: 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSK 240
           LKD   GS  GTTLLFIVFL  +TLGTILM FLR+ ++KGE+ + + +V FYSY VSLSK
Sbjct: 181 LKDGTKGSAGGTTLLFIVFLCSMTLGTILMWFLRRRDNKGEEGSLEPAVGFYSYAVSLSK 240

Query: 241 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC 300
           S+ T L DVRMLLIIPLF YSGLQQAFVWAEFTK IVTPALGVSGVGG+MAV+GAFDAIC
Sbjct: 241 SVITPLFDVRMLLIIPLFVYSGLQQAFVWAEFTKYIVTPALGVSGVGGSMAVFGAFDAIC 300

Query: 301 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 360
           SLAAGRLT+GL SIT+IVSGGA AQV+V LWIL+ Y VTSGVLGT+YPL+MAA+ GIGDG
Sbjct: 301 SLAAGRLTSGLLSITWIVSGGAFAQVIVLLWILLKYRVTSGVLGTIYPLLMAAIWGIGDG 360

Query: 361 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVAL 420
           V NTQ++AL+GILFK+DTEGAFAQ KVWQ ASI+VVFF+ PYISLQAML+VM+  +  A 
Sbjct: 361 VFNTQINALIGILFKNDTEGAFAQYKVWQSASISVVFFLSPYISLQAMLVVMLASLFTAF 420

Query: 421 VGILFLTIQVEKAFYSPRS 439
              LFLT +VE+AF S  S
Sbjct: 421 SAFLFLTHKVERAFSSSTS 439

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255581050|ref|XP_002531341.1| conserved hypothetical protein [Ricinus communis] gi|223529063|gb|EEF31048.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|30680880|ref|NP_850546.1| UNC93-like protein [Arabidopsis thaliana] gi|51971813|dbj|BAD44571.1| unnamed protein product [Arabidopsis thaliana] gi|222423196|dbj|BAH19575.1| AT3G09470 [Arabidopsis thaliana] gi|332641250|gb|AEE74771.1| UNC93-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|51971130|dbj|BAD44257.1| unnamed protein product [Arabidopsis thaliana] gi|51971419|dbj|BAD44374.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297833712|ref|XP_002884738.1| hypothetical protein ARALYDRAFT_317751 [Arabidopsis lyrata subsp. lyrata] gi|297330578|gb|EFH60997.1| hypothetical protein ARALYDRAFT_317751 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224087399|ref|XP_002308151.1| predicted protein [Populus trichocarpa] gi|222854127|gb|EEE91674.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|30680871|ref|NP_187558.2| UNC93-like protein [Arabidopsis thaliana] gi|67462074|sp|Q94AA1.1|UN933_ARATH RecName: Full=UNC93-like protein 3 gi|15146218|gb|AAK83592.1| AT3g09470/F11F8_4 [Arabidopsis thaliana] gi|28460681|gb|AAO43565.1| At3g09470/F11F8_4 [Arabidopsis thaliana] gi|332641249|gb|AEE74770.1| UNC93-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449439988|ref|XP_004137767.1| PREDICTED: UNC93-like protein 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449530173|ref|XP_004172070.1| PREDICTED: UNC93-like protein 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449439994|ref|XP_004137770.1| PREDICTED: UNC93-like protein 3-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
TAIR|locus:2074929464 AT3G09470 "AT3G09470" [Arabido 0.931 0.881 0.737 3.8e-156
UNIPROTKB|Q86WB7457 UNC93A "Protein unc-93 homolog 0.496 0.477 0.309 4.1e-42
ZFIN|ZDB-GENE-041014-304467 unc93a "unc-93 homolog A (C. e 0.526 0.494 0.317 4.8e-40
UNIPROTKB|A2VE54457 UNC93A "Protein unc-93 homolog 0.510 0.490 0.323 1.3e-39
FB|FBgn0027556538 CG4928 [Drosophila melanogaste 0.526 0.429 0.257 2.5e-39
MGI|MGI:1933250458 Unc93a "unc-93 homolog A (C. e 0.346 0.331 0.341 3.2e-37
UNIPROTKB|E2QT36456 UNC93A "Uncharacterized protei 0.476 0.458 0.308 7.2e-37
WB|WBGene00006822705 unc-93 [Caenorhabditis elegans 0.328 0.204 0.394 1.2e-36
UNIPROTKB|Q93380705 unc-93 "Putative potassium cha 0.328 0.204 0.394 1.2e-36
UNIPROTKB|F1MB34455 F1MB34 "Uncharacterized protei 0.501 0.483 0.317 4.7e-34
TAIR|locus:2074929 AT3G09470 "AT3G09470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
 Identities = 306/415 (73%), Positives = 348/415 (83%)

Query:     4 VDSR-DEEAPLVADS---LQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGN 59
             ++SR DEEAPL++ S    +V   K YTRDVHILS +FLLIFLAYGAAQNLETTVN +  
Sbjct:     1 MESRNDEEAPLISASGEDRKVRAGKCYTRDVHILSISFLLIFLAYGAAQNLETTVNKD-- 58

Query:    60 LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASL 119
             LGTISLGILY SF   S+VASLVVR++GSKNAL+LGTTGYWLFVAANL PSW+TMVPASL
Sbjct:    59 LGTISLGILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPSWFTMVPASL 118

Query:   120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179
             YLGFAASIIWVG+GTYLT+ A SHA++H LHEG+VIG FNGEFW MFA HQ  GNLITLA
Sbjct:   119 YLGFAASIIWVGQGTYLTSIARSHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITLA 178

Query:   180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLS 239
             +LKD K GSTSGTTLL +VFL  +TLGTILM F+RK + +  K    + V     L SL 
Sbjct:   179 LLKDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGKGPVGSPVGLVDSLASLP 238

Query:   240 KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAI 299
             + I T L D+RMLLI+PL AYSGLQQAFVWAEFTKEIVTPA+GVSGVGGAMAVYGA DA+
Sbjct:   239 RMIITPLLDIRMLLIVPLLAYSGLQQAFVWAEFTKEIVTPAIGVSGVGGAMAVYGALDAV 298

Query:   300 CSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359
             CS+ AGR T+GL SITFIVSGGA+AQ  VFLW+L+ Y  TSGVLGT YPLIMAA+LGIGD
Sbjct:   299 CSMTAGRFTSGLSSITFIVSGGAVAQASVFLWLLLGYRQTSGVLGTAYPLIMAAILGIGD 358

Query:   360 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 414
             G+LNTQ+SALL +LFKHDTEGAFAQLKVWQ A+IA+VFF+ PYISLQAMLIVM+V
Sbjct:   359 GILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFLSPYISLQAMLIVMLV 413
GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|Q86WB7 UNC93A "Protein unc-93 homolog A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041014-304 unc93a "unc-93 homolog A (C. elegans)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A2VE54 UNC93A "Protein unc-93 homolog A" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0027556 CG4928 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1933250 Unc93a "unc-93 homolog A (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QT36 UNC93A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00006822 unc-93 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q93380 unc-93 "Putative potassium channel regulatory protein unc-93" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1MB34 F1MB34 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94AA1UN933_ARATHNo assigned EC number0.73380.93390.8836nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
pfam05978157 pfam05978, UNC-93, Ion channel regulatory protein 9e-15
>gnl|CDD|114686 pfam05978, UNC-93, Ion channel regulatory protein UNC-93 Back     alignment and domain information 
 Score = 71.2 bits (175), Expect = 9e-15
 Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 20/154 (12%)

Query: 33  LSCAFLLIFLAYGAAQNLETTV----------NTEGNLGTISLGILYTSFTCFSLVASLV 82
           L   FL +F A+ +   +  +V                G  SL I+Y  FT   L A  V
Sbjct: 1   LGFGFLFLFTAFDSQGFILESVIHSLHERDPGTISAYAGYYSLAIIYFFFTVSCLFAPSV 60

Query: 83  VRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142
           V +L  K A+++G   Y  F    LF + Y +  +S  LG  A+ +W G+G YLT     
Sbjct: 61  VDILTPKWAMVIGALCYASFQLGFLFLNSYYLYFSSALLGVGAAFLWTGQGQYLT----E 116

Query: 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176
           +++         I       W +  S    G + 
Sbjct: 117 NSTRET------IERNTSIQWAIGKSSLIFGGIF 144

This family of proteins is a component of a multi-subunit protein complex which is involved in the coordination of muscle contraction. UNC-93 is most likely an ion channel regulatory protein. Length = 157

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 439
KOG3098461 consensus Uncharacterized conserved protein [Funct 99.98
PRK03545390 putative arabinose transporter; Provisional 99.97
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.96
TIGR00897402 2A0118 polyol permease family. This family of prot 99.95
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.95
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.95
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.95
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.95
PRK11663434 regulatory protein UhpC; Provisional 99.95
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.95
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.95
PLN00028476 nitrate transmembrane transporter; Provisional 99.95
PRK09874408 drug efflux system protein MdtG; Provisional 99.95
PRK03699394 putative transporter; Provisional 99.94
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.94
PRK10642490 proline/glycine betaine transporter; Provisional 99.94
PRK03633381 putative MFS family transporter protein; Provision 99.94
PRK12382392 putative transporter; Provisional 99.94
PRK09705393 cynX putative cyanate transporter; Provisional 99.94
PRK12307426 putative sialic acid transporter; Provisional 99.94
PRK10091382 MFS transport protein AraJ; Provisional 99.94
PRK09952438 shikimate transporter; Provisional 99.94
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.94
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.94
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.94
TIGR00893399 2A0114 d-galactonate transporter. 99.94
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.94
PRK05122399 major facilitator superfamily transporter; Provisi 99.94
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.94
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.93
PRK10489417 enterobactin exporter EntS; Provisional 99.93
TIGR00900365 2A0121 H+ Antiporter protein. 99.93
PRK11652394 emrD multidrug resistance protein D; Provisional 99.93
TIGR00891405 2A0112 putative sialic acid transporter. 99.93
PRK10133438 L-fucose transporter; Provisional 99.93
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.93
PRK10504471 putative transporter; Provisional 99.93
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.93
PRK11043401 putative transporter; Provisional 99.93
PRK11195393 lysophospholipid transporter LplT; Provisional 99.93
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.93
PRK11646400 multidrug resistance protein MdtH; Provisional 99.93
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.93
TIGR00895398 2A0115 benzoate transport. 99.93
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.93
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.92
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.92
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.92
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.92
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.92
PRK10054395 putative transporter; Provisional 99.92
PRK15075434 citrate-proton symporter; Provisional 99.92
KOG3097390 consensus Predicted membrane protein [Function unk 99.92
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.92
KOG2533495 consensus Permease of the major facilitator superf 99.91
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.91
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.91
PRK03893496 putative sialic acid transporter; Provisional 99.91
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.91
PRK11010491 ampG muropeptide transporter; Validated 99.91
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.9
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.9
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.9
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.9
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.9
TIGR00898505 2A0119 cation transport protein. 99.9
PRK09528420 lacY galactoside permease; Reviewed 99.9
KOG1330493 consensus Sugar transporter/spinster transmembrane 99.9
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.9
TIGR00896355 CynX cyanate transporter. This family of proteins 99.89
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.89
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.89
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.89
PRK15011393 sugar efflux transporter B; Provisional 99.88
KOG2532466 consensus Permease of the major facilitator superf 99.88
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.87
PRK11902402 ampG muropeptide transporter; Reviewed 99.87
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.87
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.87
TIGR00901356 2A0125 AmpG-related permease. 99.86
KOG0569485 consensus Permease of the major facilitator superf 99.86
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.85
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.85
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.85
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.85
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.85
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.84
PTZ00207591 hypothetical protein; Provisional 99.81
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.8
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.79
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 99.78
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.78
TIGR00805 633 oat sodium-independent organic anion transporter. 99.77
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.77
KOG0254513 consensus Predicted transporter (major facilitator 99.75
KOG2615451 consensus Permease of the major facilitator superf 99.75
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.71
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.7
PRK09669444 putative symporter YagG; Provisional 99.7
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.7
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.68
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.66
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.66
PRK10429473 melibiose:sodium symporter; Provisional 99.65
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.62
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.62
PF13347428 MFS_2: MFS/sugar transport protein 99.61
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.61
PRK09848448 glucuronide transporter; Provisional 99.61
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.59
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.59
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.58
KOG2563480 consensus Permease of the major facilitator superf 99.58
PRK11462460 putative transporter; Provisional 99.57
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.46
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.44
COG2270438 Permeases of the major facilitator superfamily [Ge 99.43
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.4
COG2211467 MelB Na+/melibiose symporter and related transport 99.38
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 99.26
KOG2325488 consensus Predicted transporter/transmembrane prot 99.25
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.24
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.19
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.18
PRK05122399 major facilitator superfamily transporter; Provisi 99.17
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.14
PRK10054 395 putative transporter; Provisional 99.09
PRK15011393 sugar efflux transporter B; Provisional 99.09
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.07
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.07
PRK12382392 putative transporter; Provisional 99.05
TIGR00900 365 2A0121 H+ Antiporter protein. 99.01
PRK10642490 proline/glycine betaine transporter; Provisional 98.98
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.98
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.98
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.97
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.97
PRK09874408 drug efflux system protein MdtG; Provisional 98.97
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.96
PRK03545 390 putative arabinose transporter; Provisional 98.95
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 98.95
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.94
PRK10091 382 MFS transport protein AraJ; Provisional 98.94
PRK10489 417 enterobactin exporter EntS; Provisional 98.93
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 98.92
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.91
PRK11663 434 regulatory protein UhpC; Provisional 98.91
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.9
PRK09528420 lacY galactoside permease; Reviewed 98.88
PRK03699394 putative transporter; Provisional 98.87
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.87
PRK09705 393 cynX putative cyanate transporter; Provisional 98.86
PRK10504 471 putative transporter; Provisional 98.86
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 98.85
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.85
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.84
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.84
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 98.83
TIGR00898505 2A0119 cation transport protein. 98.83
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.82
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 98.82
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.82
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.82
PRK03633 381 putative MFS family transporter protein; Provision 98.82
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 98.8
TIGR00897402 2A0118 polyol permease family. This family of prot 98.79
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.79
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.79
TIGR00895398 2A0115 benzoate transport. 98.78
TIGR00891 405 2A0112 putative sialic acid transporter. 98.77
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.76
PRK11902 402 ampG muropeptide transporter; Reviewed 98.76
PRK10133 438 L-fucose transporter; Provisional 98.76
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.75
KOG3626 735 consensus Organic anion transporter [Secondary met 98.75
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.75
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.74
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.73
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.72
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 98.72
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.72
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.71
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.71
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.71
PRK11043 401 putative transporter; Provisional 98.71
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.71
PRK09952438 shikimate transporter; Provisional 98.7
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 98.68
TIGR00893 399 2A0114 d-galactonate transporter. 98.68
PRK11010 491 ampG muropeptide transporter; Validated 98.68
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.66
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.65
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.65
COG2270438 Permeases of the major facilitator superfamily [Ge 98.65
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 98.65
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.63
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.63
PRK12307 426 putative sialic acid transporter; Provisional 98.63
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.62
PLN00028 476 nitrate transmembrane transporter; Provisional 98.59
PRK03893 496 putative sialic acid transporter; Provisional 98.57
TIGR00901356 2A0125 AmpG-related permease. 98.53
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.53
PRK09848448 glucuronide transporter; Provisional 98.53
TIGR00896355 CynX cyanate transporter. This family of proteins 98.51
PF13347428 MFS_2: MFS/sugar transport protein 98.51
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.51
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.51
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.5
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.48
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 98.48
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.48
PRK10077 479 xylE D-xylose transporter XylE; Provisional 98.47
TIGR00805 633 oat sodium-independent organic anion transporter. 98.46
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.44
PRK15075434 citrate-proton symporter; Provisional 98.44
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.42
PRK10406432 alpha-ketoglutarate transporter; Provisional 98.41
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.35
PRK09669444 putative symporter YagG; Provisional 98.32
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.31
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.31
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.31
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.28
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.26
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.23
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 98.23
PTZ00207 591 hypothetical protein; Provisional 98.21
COG2211467 MelB Na+/melibiose symporter and related transport 98.2
PRK10429473 melibiose:sodium symporter; Provisional 98.16
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.15
PRK11462460 putative transporter; Provisional 98.12
KOG3762618 consensus Predicted transporter [General function 98.08
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.06
KOG2615 451 consensus Permease of the major facilitator superf 98.02
KOG0254 513 consensus Predicted transporter (major facilitator 98.01
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 97.99
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 97.98
TIGR00788468 fbt folate/biopterin transporter. The only functio 97.95
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 97.94
KOG3762618 consensus Predicted transporter [General function 97.92
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 97.9
KOG2325 488 consensus Predicted transporter/transmembrane prot 97.86
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.84
COG0477338 ProP Permeases of the major facilitator superfamil 97.76
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 97.72
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 97.7
KOG0569 485 consensus Permease of the major facilitator superf 97.68
KOG2532 466 consensus Permease of the major facilitator superf 97.65
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 97.62
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 97.52
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.45
KOG3810433 consensus Micronutrient transporters (folate trans 97.38
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 97.3
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.22
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.14
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 97.0
PF1283277 MFS_1_like: MFS_1 like family 96.76
KOG2533 495 consensus Permease of the major facilitator superf 96.74
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 96.71
KOG0637498 consensus Sucrose transporter and related proteins 96.67
KOG0637 498 consensus Sucrose transporter and related proteins 96.44
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 96.19
PF1283277 MFS_1_like: MFS_1 like family 95.64
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 95.62
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 95.6
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 95.6
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 95.21
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 95.17
KOG3626 735 consensus Organic anion transporter [Secondary met 94.8
KOG2816463 consensus Predicted transporter ADD1 (major facili 94.54
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 94.52
COG0477 338 ProP Permeases of the major facilitator superfamil 94.16
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 93.9
KOG2563 480 consensus Permease of the major facilitator superf 93.41
COG3202509 ATP/ADP translocase [Energy production and convers 93.37
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 93.23
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 92.46
KOG3098461 consensus Uncharacterized conserved protein [Funct 92.12
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 92.01
PRK03612 521 spermidine synthase; Provisional 91.87
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 91.78
PRK03612521 spermidine synthase; Provisional 91.64
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 89.95
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 89.35
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 86.79
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 83.0
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 82.5
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
Probab=99.98  E-value=1.2e-29  Score=248.43  Aligned_cols=392  Identities=26%  Similarity=0.406  Sum_probs=289.1

Q ss_pred             CccccchhHHHHHHHHHHHHHHHhhhhhhHhhhc----c------CCCCchHHHHHHHHHHHhhhhhHHHHHHHhchhHH
Q 013645           22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVN----T------EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNA   91 (439)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----~------~~~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~   91 (439)
                      ++++.++++..++++.++.+.++.+...+++.+-    +      +.+-|..+++++|..++++++++|.+.|+.|+|+.
T Consensus         3 ~~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~   82 (461)
T KOG3098|consen    3 PRRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWA   82 (461)
T ss_pred             cccchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHH
Confidence            4556789999999999999999998877766542    2      14567778999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhh
Q 013645           92 LILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQF  171 (439)
Q Consensus        92 l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~  171 (439)
                      |++|..+|..+.++++.+|-+.++++.++.|+|.+..|.+++.|+++++          .++++.++.++.|+....+..
T Consensus        83 lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~s----------t~~tie~Nisi~Wai~~~~li  152 (461)
T KOG3098|consen   83 LVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS----------TRETIERNISIFWAIGQSSLI  152 (461)
T ss_pred             HHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcC----------ChhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999888889999999999999999999999998          678999999999999999999


Q ss_pred             hhhHHHHHhhcCCC-CC--CCCcchHH----------HHHHHHHH---HHHHHHHHhccCCCccccccccccchhhhhhH
Q 013645          172 VGNLITLAVLKDDK-GG--STSGTTLL----------FIVFLGVI---TLGTILMCFLRKEEDKGEKETADASVNFYSYL  235 (439)
Q Consensus       172 iG~~i~~~l~~~~~-~~--~~~w~~~~----------~~~~~~~~---~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  235 (439)
                      +|+.+-..+.++.+ ++  ..+.++..          ...+.++.   .++++...+.|.++...+.+.     . +..+
T Consensus       153 ~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~-----~-~~~~  226 (461)
T KOG3098|consen  153 IGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSS-----S-ETSF  226 (461)
T ss_pred             hhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhh-----c-cccH
Confidence            99887666554332 10  11222111          11111111   122222223333222211111     1 1355


Q ss_pred             HHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccc---cchHHHHHHHHHHHHHHHHhhhhhhcCC
Q 013645          236 VSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGV---SGVGGAMAVYGAFDAICSLAAGRLTTGL  311 (439)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~~~~~i~~~ig~~~~G~l~d~~  311 (439)
                      ++.++...+++++|+++.+.|.+++.|+..+|+.+.||..+. ++..+.   .-.+..+...+++++++....+.++||.
T Consensus       227 ~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~ri  306 (461)
T KOG3098|consen  227 SELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRI  306 (461)
T ss_pred             HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhh
Confidence            677778889999999999999999999999999999998752 112222   2245556678888888888888887665


Q ss_pred             ---CCcceehhhHHHHHHHHHHHHHhhccCCCC---------cc--chHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC
Q 013645          312 ---PSITFIVSGGAIAQVVVFLWILINYSVTSG---------VL--GTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD  377 (439)
Q Consensus       312 ---~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~  377 (439)
                         |++. .+..+.+++.+...++.+..+.+..         ++  ...+..++.++.|++|++++++.+.++++++|++
T Consensus       307 r~fg~~~-~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~  385 (461)
T KOG3098|consen  307 RGFGRKP-TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD  385 (461)
T ss_pred             hhcccCc-chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc
Confidence               4444 4556666665544333333332221         00  1346788999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645          378 TEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV  430 (439)
Q Consensus       378 ~~~a~s~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (439)
                      +.++++++++.|+.+.+++.+..+............+.+.++....+...++.
T Consensus       386 ~~~~fsi~kfyq~~~s~v~~f~~~~~~l~~~~l~~~i~~~i~~~~~~~~~~~~  438 (461)
T KOG3098|consen  386 RAQAFSLFKFYQSVASCVAFFFSPYLLLYIYTLGLPIFCVIATTIFFIVAERT  438 (461)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999998888887766666666666666666666555544

>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 7e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 31/204 (15%), Positives = 54/204 (26%), Gaps = 78/204 (38%)

Query: 131 GEG-TYLTAAALSHASNHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGS 188
           G G T++         ++K+         + + FW            + L          
Sbjct: 160 GSGKTWVALDVCL---SYKVQC-----KMDFKIFW------------LNL-------KNC 192

Query: 189 TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 248
            S  T+L             ++  L  + D      +D S N    + S+   +  LL  
Sbjct: 193 NSPETVL------------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 249 ---VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC-SLAA 304
                 LL+        L    V      +                   AF+  C  L  
Sbjct: 241 KPYENCLLV--------LLN--VQ---NAKAWN----------------AFNLSCKIL-- 269

Query: 305 GRLTTGLPSITFIVSGGAIAQVVV 328
             LTT    +T  +S      + +
Sbjct: 270 --LTTRFKQVTDFLSAATTTHISL 291
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Length = 438 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query439
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.98
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.97
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.94
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.93
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.93
2cfq_A417 Lactose permease; transport, transport mechanism, 99.88
2xut_A524 Proton/peptide symporter family protein; transport 99.86
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.12
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.09
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.04
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.99
2xut_A 524 Proton/peptide symporter family protein; transport 98.88
2cfq_A417 Lactose permease; transport, transport mechanism, 98.84
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 98.63
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=99.98  E-value=1.4e-29  Score=253.54  Aligned_cols=381  Identities=10%  Similarity=-0.003  Sum_probs=253.5

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645           27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF  102 (439)
Q Consensus        27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~  102 (439)
                      ++.++.+.++.++............+.+.++. .+.    ...++......+++++.|+++||+|||+++.++.+++++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~  105 (451)
T 1pw4_A           27 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV  105 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHH
Confidence            34444454555554544444445555555443 322    2355666677888999999999999999999999988776


Q ss_pred             HHh-hh----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH
Q 013645          103 VAA-NL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT  177 (439)
Q Consensus       103 ~~~-~~----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~  177 (439)
                      .+. ..    .++++.++++|++.|++.+..+++..++++|+.          |+++|++++|+.....++|.++|+.++
T Consensus       106 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~g~~~~  175 (451)
T 1pw4_A          106 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW----------SQKERGGIVSVWNCAHNVGGGIPPLLF  175 (451)
T ss_dssp             HHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTC----------TTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             HHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHC----------CchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            654 35    688999999999999999999999999998886          789999999999999999999999998


Q ss_pred             HHhhcCCCCCCCC-cchHHHHHHHHHHHHHHH-HHHhccCCCccccc---cccccc----hhhhhhHHHHHHH--HHHhh
Q 013645          178 LAVLKDDKGGSTS-GTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEK---ETADAS----VNFYSYLVSLSKS--ITTLL  246 (439)
Q Consensus       178 ~~l~~~~~~~~~~-w~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~--~~~~~  246 (439)
                      ..+...     .+ ||..++ +.+++.++..+ ..+++||+++..+.   +..+.+    .....+.+...++  .++.+
T Consensus       176 ~~l~~~-----~g~w~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (451)
T 1pw4_A          176 LLGMAW-----FNDWHAALY-MPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVL  249 (451)
T ss_dssp             HHHHHH-----TCCSTTCTH-HHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTS
T ss_pred             HHHHHH-----hccHHHHHH-HHHHHHHHHHHHHHhhccCCHhhcCCCChhhhcccccccchhhhhcccccccchHHHHH
Confidence            876543     24 887544 44444444333 34567764432110   000000    0000000000011  24567


Q ss_pred             ccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCC--CCcceehhhHHH
Q 013645          247 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSGGAI  323 (439)
Q Consensus       247 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~--~~r~~~~~~g~~  323 (439)
                      ++|+++......+..+........+++.++.+ .+.+....+.+....+++.++++++.|++.||+  ++|+.+ ..+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~~~  328 (451)
T 1pw4_A          250 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT-GVFFM  328 (451)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH-HHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhH-HHHHH
Confidence            88888876665444443332233444544433 345566788888899999999999999999998  877644 34444


Q ss_pred             HHH-HHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHH-HHHHHHHHh
Q 013645          324 AQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA-SIAVVFFIG  400 (439)
Q Consensus       324 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~-g~~i~~~i~  400 (439)
                      +.. +++.  .+.+.++.+   .....++.++.|++.+...+..++++.+.+|++. +.++|+++..+.+ |..+++.+.
T Consensus       329 ~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~  403 (451)
T 1pw4_A          329 TLVTIATI--VYWMNPAGN---PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV  403 (451)
T ss_dssp             HHHHHHHH--HTTSCCTTC---HHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHhcccC---HHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            433 4332  233333222   3556677788899888888888999999999875 5678998888888 888777655


Q ss_pred             hh----hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645          401 PY----ISLQAMLIVMVVGICVALVGILFLTIQV  430 (439)
Q Consensus       401 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (439)
                      +.    .++...+++.+++.+++.+..+++.++.
T Consensus       404 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (451)
T 1pw4_A          404 GYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE  437 (451)
T ss_dssp             HHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            43    3577777777777777777776654443
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query439
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.97
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.89
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.08
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 98.87
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.9e-28  Score=237.73  Aligned_cols=382  Identities=10%  Similarity=-0.005  Sum_probs=233.8

Q ss_pred             HHHHHHHHHHHHHHH---hhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645           30 VHILSCAFLLIFLAY---GAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF  102 (439)
Q Consensus        30 ~~~l~~~~~~~~~~~---~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~  102 (439)
                      |.++...++..+..+   .....+.|.+.++ +...    ...+.....++++++++|+++||+|||+++..+.++.++.
T Consensus        24 w~i~~~~~~~~~~~~~~~~~~~~~~p~~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~  102 (447)
T d1pw4a_          24 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV  102 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence            444444444444443   3334455555432 2222    2456677788899999999999999999999999887665


Q ss_pred             HHhh-h----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH
Q 013645          103 VAAN-L----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT  177 (439)
Q Consensus       103 ~~~~-~----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~  177 (439)
                      .+.. .    .+++..+++.|++.|++.|..+++..++++++.          |+++|++++|++..+..+|..+|+.++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~i~~~~~  172 (447)
T d1pw4a_         103 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW----------SQKERGGIVSVWNCAHNVGGGIPPLLF  172 (447)
T ss_dssp             HHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTC----------TTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             HhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH----------Hhhcccccccccccccchhhhhhhhhh
Confidence            5432 2    257788889999999999999999888888886          889999999999999999999999887


Q ss_pred             HHhhcCCCCCCCCcchHHHHHHHHHHH-HHHHHHHhccCCCcccc----ccccc--cch---hhhhhHHHHHHHHHHhhc
Q 013645          178 LAVLKDDKGGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKGE----KETAD--ASV---NFYSYLVSLSKSITTLLA  247 (439)
Q Consensus       178 ~~l~~~~~~~~~~w~~~~~~~~~~~~~-l~~~~~~~l~~~~~~~~----~~~~~--~~~---~~~~~~~~~~~~~~~~~~  247 (439)
                      .......    .+||..+++ ..++.+ ++++...+++++++...    ++..+  .+.   ..+++........++.++
T Consensus       173 ~~~~~~~----~~w~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (447)
T d1pw4a_         173 LLGMAWF----NDWHAALYM-PAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLP  247 (447)
T ss_dssp             HHHHHHT----CCSTTCTHH-HHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSS
T ss_pred             hhHhhhh----hcccccchh-hhhhHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHc
Confidence            7665432    247765443 343343 34444455665433211    00000  000   000000000112345677


Q ss_pred             cchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHH
Q 013645          248 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV  326 (439)
Q Consensus       248 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~  326 (439)
                      ++.++......++..........+.+.++.+ .+.+.+..+.......++.+++.++.|++.||.+++............
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  327 (447)
T d1pw4a_         248 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTL  327 (447)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred             CchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHH
Confidence            8887776654443333222222334433322 345566778888889999999999999999999876432211111111


Q ss_pred             HHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHH-HHHHHHHHhh---
Q 013645          327 VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCA-SIAVVFFIGP---  401 (439)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~-g~~i~~~i~~---  401 (439)
                      ..............+   .....++.++.|++.+...+..+++..|.+|++.+ .+.|+.+...++ |..+++.+.+   
T Consensus       328 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~  404 (447)
T d1pw4a_         328 VTIATIVYWMNPAGN---PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV  404 (447)
T ss_dssp             HHHHHHHTTSCCTTC---HHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111222222222   35566777888888888888899999999998864 577887777665 4445554433   


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645          402 -YISLQAMLIVMVVGICVALVGILFLTIQV  430 (439)
Q Consensus       402 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (439)
                       ..++...++++.+..+++++....+..+.
T Consensus       405 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (447)
T d1pw4a_         405 DFFGWDGGFMVMIGGSILAVILLIVVMIGE  434 (447)
T ss_dssp             HSSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhChHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             33556666666666666655555444433
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure