Citrus Sinensis ID: 013672

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MASAFSSSSAITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL
cccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEcccccccEEEEccccccccccccccEEEccccccccHHHHcccccEEEEEccccccccccEEccccccccccccccEEEEEcccccccccEEEEEEEEEEEccEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEcccEEEEccccEEEEEccccEEEEEEEccccccEEEEEEEEEEEEEEEccccEEEEEccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccccEEEEEEEEEccccccEEEEEEccccccEEccccccccccccccccccccccccEEcccccHHHHcccccccccccccEEEEEcccccEEEEEEEEEEEEEccEEEEEcEEEEEEcccccccccccEEEEcccccccEHccccccEEEEEEcccccccccEEEEEccccccccccEEEEEEEEEEccccccEEEEEEcEEEEccEEEEcccccEEEEcccccEEEEEccccEEcccHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccEEEEEEccEcccccHHHEEEEEccccEEEEEccccccEEEEEcHEEccEEEEEEccccEEEEEccccccc
masafsssSAITFLLALATLALCvspafsasagfkVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMslaasdtasdlkssvhagtgeylmdlsigspavsFSAIldtgsdliwtqckpcqvcfdqatpifdpkesssyskipcssalckalpqqecnannaCEYIysygdtsssqgvlatetltfgdvsvpnigfgcgsdnegdgfsqgaglvglgrgplslvsqlkepkfsycltsiDAAKTSTLLMGSLasanssssdqilttpliksplqasfyylplegisvggtrlpidasnfalqedgsggliidsgtTLTYLIDSAFDLVKKEFIsqtklsvtdaadqtgldvcfklpsgstdvevpklvfhfkgadvdlppenymiaDSSMGLACLamgsssgmsifgnVQQQNMLVLYDLAKETlsfiptqcdkl
MASAFSSSSAITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKlsvtdaadqtGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETlsfiptqcdkl
MasafssssaitfllalatlalCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGslasanssssDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL
*********AITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKR***************************AGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFD*******SKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKT*********************TPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIP******
******S*SAITFLLALATLALCVSPAFSASAGFKVK***********************************************VHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQ**C*ANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLT****************S***SSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFIS************TGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL
********SAITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLA**********SVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDP*********PCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGSL**********ILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL
**S*FSSSSAITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCD*L
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASAFSSSSAITFLLALATLALCVSPAFSASAGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query438 2.2.26 [Sep-21-2011]
Q766C3437 Aspartic proteinase nepen N/A no 0.956 0.958 0.532 1e-128
Q766C2438 Aspartic proteinase nepen N/A no 0.945 0.945 0.487 1e-113
Q3EBM5447 Probable aspartic proteas no no 0.865 0.847 0.412 2e-64
Q6XBF8437 Aspartic proteinase CDR1 no no 0.885 0.887 0.386 7e-62
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.803 0.704 0.388 5e-60
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.858 0.8 0.359 2e-56
Q9LZL3453 Aspartic proteinase PCS1 no no 0.742 0.717 0.329 1e-40
Q9S9K4475 Aspartic proteinase-like no no 0.853 0.787 0.283 7e-29
P69476164 Aspartic proteinase nepen N/A no 0.253 0.676 0.426 6e-22
Q0IU52410 Aspartic proteinase Asp1 no no 0.742 0.792 0.262 9e-22
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function desciption
 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/443 (53%), Positives = 312/443 (70%), Gaps = 24/443 (5%)

Query: 7   SSSAITFLLALATLALCVSPAFSAS------------AGFKVKLKSVDFGKKLSTFERVL 54
           +SS  +FLLAL+ + + V+P  S S             GF++ L+ VD GK L+ F+ + 
Sbjct: 2   ASSLYSFLLALSIVYIFVAPTHSTSRTALNHRHEAKVTGFQIMLEHVDSGKNLTKFQLLE 61

Query: 55  HGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSD 114
             ++RG  RLQR  AM     +  S +++SV+AG GEYLM+LSIG+PA  FSAI+DTGSD
Sbjct: 62  RAIERGSRRLQRLEAML----NGPSGVETSVYAGDGEYLMNLSIGTPAQPFSAIMDTGSD 117

Query: 115 LIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGD 174
           LIWTQC+PC  CF+Q+TPIF+P+ SSS+S +PCSS LC+AL    C +NN C+Y Y YGD
Sbjct: 118 LIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTC-SNNFCQYTYGYGD 176

Query: 175 TSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPK 234
            S +QG + TETLTFG VS+PNI FGCG +N+G G   GAGLVG+GRGPLSL SQL   K
Sbjct: 177 GSETQGSMGTETLTFGSVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTK 236

Query: 235 FSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTR 294
           FSYC+T I ++  S LL+GSLA++ ++ S     T LI+S    +FYY+ L G+SVG TR
Sbjct: 237 FSYCMTPIGSSTPSNLLLGSLANSVTAGSPN---TTLIQSSQIPTFYYITLNGLSVGSTR 293

Query: 295 LPIDASNFALQ-EDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLD 353
           LPID S FAL   +G+GG+IIDSGTTLTY +++A+  V++EFISQ  L V + +  +G D
Sbjct: 294 LPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSS-SGFD 352

Query: 354 VCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSS-GMSIFGNV 412
           +CF+ PS  +++++P  V HF G D++LP ENY I+ S+ GL CLAMGSSS GMSIFGN+
Sbjct: 353 LCFQTPSDPSNLQIPTFVMHFDGGDLELPSENYFISPSN-GLICLAMGSSSQGMSIFGNI 411

Query: 413 QQQNMLVLYDLAKETLSFIPTQC 435
           QQQNMLV+YD     +SF   QC
Sbjct: 412 QQQNMLVVYDTGNSVVSFASAQC 434
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|P69476|NEP1_NEPDI Aspartic proteinase nepenthesin-1 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
224060469439 predicted protein [Populus trichocarpa] 0.979 0.977 0.691 1e-167
224126751439 predicted protein [Populus trichocarpa] 0.970 0.968 0.688 1e-164
255563827442 Aspartic proteinase nepenthesin-1 precur 0.931 0.923 0.679 1e-158
356508918453 PREDICTED: aspartic proteinase nepenthes 0.920 0.889 0.654 1e-153
449523529461 PREDICTED: aspartic proteinase nepenthes 0.926 0.880 0.646 1e-153
449453902 716 PREDICTED: LOW QUALITY PROTEIN: aspartic 0.926 0.567 0.646 1e-153
356516413453 PREDICTED: aspartic proteinase nepenthes 0.915 0.885 0.651 1e-151
225438315436 PREDICTED: aspartic proteinase nepenthes 0.972 0.977 0.625 1e-151
147862576436 hypothetical protein VITISV_006338 [Viti 0.972 0.977 0.607 1e-146
225437854436 PREDICTED: aspartic proteinase nepenthes 0.972 0.977 0.602 1e-145
>gi|224060469|ref|XP_002300215.1| predicted protein [Populus trichocarpa] gi|222847473|gb|EEE85020.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/444 (69%), Positives = 362/444 (81%), Gaps = 15/444 (3%)

Query: 5   FSSSSAITFLLALATLALCVSPAFSAS----------AGFKVKLKSVDFGKKLSTFERVL 54
            +S +++ F+LALA   +  SPAFS S           GF+V+LK VD GK L+  ER+ 
Sbjct: 1   MASMTSLCFVLALAMFTIFFSPAFSTSRRALEHPKMQKGFRVRLKHVDSGKNLTKLERIR 60

Query: 55  HGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSD 114
           HG+KRG++RLQR  AM+L AS ++S++++ V  G GE+LM L+IG+P  ++SAILDTGSD
Sbjct: 61  HGVKRGRNRLQRLQAMALVAS-SSSEIEAPVLPGNGEFLMKLAIGTPPETYSAILDTGSD 119

Query: 115 LIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQECNANNACEYIYSYGD 174
           LIWTQCKPC  CF Q+TPIFDPK+SSS+SK+ CSS LC+ALPQ  CN  N CEY+YSYGD
Sbjct: 120 LIWTQCKPCTQCFHQSTPIFDPKKSSSFSKLSCSSQLCEALPQSSCN--NGCEYLYSYGD 177

Query: 175 TSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKEPK 234
            SS+QG+LA+ETLTFG  SVPN+ FGCG+DNEG GFSQGAGLVGLGRGPLSLVSQLKEPK
Sbjct: 178 YSSTQGILASETLTFGKASVPNVAFGCGADNEGSGFSQGAGLVGLGRGPLSLVSQLKEPK 237

Query: 235 FSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTR 294
           FSYCLT++D  KTSTLLMGSLAS N+SSS  I TTPLI SP   SFYYL LEGISVG TR
Sbjct: 238 FSYCLTTVDDTKTSTLLMGSLASVNASSS-AIKTTPLIHSPAHPSFYYLSLEGISVGDTR 296

Query: 295 LPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDV 354
           LPI  S F+LQ+DGSGGLIIDSGTT+TYL +SAF+LV KEF ++  L V D++  TGLDV
Sbjct: 297 LPIKKSTFSLQDDGSGGLIIDSGTTITYLEESAFNLVAKEFTAKINLPV-DSSGSTGLDV 355

Query: 355 CFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQ 414
           CF LPSGST++EVPKLVFHF GAD++LP ENYMI DSSMG+ACLAMGSSSGMSIFGNVQQ
Sbjct: 356 CFTLPSGSTNIEVPKLVFHFDGADLELPAENYMIGDSSMGVACLAMGSSSGMSIFGNVQQ 415

Query: 415 QNMLVLYDLAKETLSFIPTQCDKL 438
           QNMLVL+DL KETLSF+PTQCD L
Sbjct: 416 QNMLVLHDLEKETLSFLPTQCDLL 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224126751|ref|XP_002329464.1| predicted protein [Populus trichocarpa] gi|222870144|gb|EEF07275.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255563827|ref|XP_002522914.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223537841|gb|EEF39457.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356508918|ref|XP_003523200.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|449523529|ref|XP_004168776.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449453902|ref|XP_004144695.1| PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase nepenthesin-1-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|356516413|ref|XP_003526889.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|225438315|ref|XP_002272802.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147862576|emb|CAN79341.1| hypothetical protein VITISV_006338 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225437854|ref|XP_002264056.1| PREDICTED: aspartic proteinase nepenthesin-1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.926 0.880 0.588 1.2e-131
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.799 0.721 0.438 1.1e-71
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.796 0.722 0.428 9.9e-71
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.799 0.724 0.436 2.4e-69
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.906 0.908 0.377 5.6e-68
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.801 0.702 0.387 1.5e-65
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.894 0.909 0.377 2e-65
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.799 0.786 0.422 6.7e-65
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.803 0.748 0.368 4.2e-63
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.867 0.850 0.384 5.5e-61
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
 Identities = 247/420 (58%), Positives = 320/420 (76%)

Query:    32 AGFKVKLKSVDFGKKLSTFERVLHGMKRGQHRLQRFNAMSLAA----SDTASDLKSSVHA 87
             +GF++ L+ VD GK L+  +++  G+ RG HRL R  A+++ A     D  +++K+  H 
Sbjct:    43 SGFRLSLRHVDSGKNLTKIQKIQRGINRGFHRLNRLGAVAVLAVASKPDDTNNIKAPTHG 102

Query:    88 GTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPC 147
             G+GE+LM+LSIG+PAV +SAI+DTGSDLIWTQCKPC  CFDQ TPIFDP++SSSYSK+ C
Sbjct:   103 GSGEFLMELSIGNPAVKYSAIVDTGSDLIWTQCKPCTECFDQPTPIFDPEKSSSYSKVGC 162

Query:   148 SSALCKALPQQECNAN-NACEYIYSYGDTSSSQGVLATETLTFGDV-SVPNIGFGCGSDN 205
             SS LC ALP+  CN + +ACEY+Y+YGD SS++G+LATET TF D  S+  IGFGCG +N
Sbjct:   163 SSGLCNALPRSNCNEDKDACEYLYTYGDYSSTRGLLATETFTFEDENSISGIGFGCGVEN 222

Query:   206 EGDGFSQGAGLVGLGRGPLSLVSQLKEPKFSYCLTSI-DAAKTSTLLMGXXXXXXXXXXD 264
             EGDGFSQG+GLVGLGRGPLSL+SQLKE KFSYCLTSI D+  +S+L +G           
Sbjct:   223 EGDGFSQGSGLVGLGRGPLSLISQLKETKFSYCLTSIEDSEASSSLFIGSLASGIVNKTG 282

Query:   265 QIL------TTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGT 318
               L      T  L+++P Q SFYYL L+GI+VG  RL ++ S F L EDG+GG+IIDSGT
Sbjct:   283 ASLDGEVTKTMSLLRNPDQPSFYYLELQGITVGAKRLSVEKSTFELAEDGTGGMIIDSGT 342

Query:   319 TLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGAD 378
             T+TYL ++AF ++K+EF S+  L V D+   TGLD+CFKLP  + ++ VPK++FHFKGAD
Sbjct:   343 TITYLEETAFKVLKEEFTSRMSLPVDDSGS-TGLDLCFKLPDAAKNIAVPKMIFHFKGAD 401

Query:   379 VDLPPENYMIADSSMGLACLAMGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDKL 438
             ++LP ENYM+ADSS G+ CLAMGSS+GMSIFGNVQQQN  VL+DL KET+SF+PT+C KL
Sbjct:   402 LELPGENYMVADSSTGVLCLAMGSSNGMSIFGNVQQQNFNVLHDLEKETVSFVPTECGKL 461
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q766C3NEP1_NEPGR3, ., 4, ., 2, 3, ., 1, 20.53270.95660.9588N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.963
3rd Layer3.4.23.120.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-115
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-107
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 8e-93
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-55
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 5e-30
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 9e-28
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 5e-25
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 5e-22
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 6e-17
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 6e-16
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 3e-15
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 3e-15
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 7e-12
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 4e-09
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 5e-07
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-05
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 2e-04
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 3e-04
cd05487326 cd05487, renin_like, Renin stimulates production o 3e-04
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  343 bits (881), Expect = e-115
 Identities = 189/458 (41%), Positives = 253/458 (55%), Gaps = 53/458 (11%)

Query: 5   FSSSSAITFLLALATLALCVSPAFSASAGFKVKL------KSVDFGKKLSTFERVLHGMK 58
           FS   A+            +S A +   GF V L      KS  +    +  +R+ +  +
Sbjct: 1   FSVLLALCLFSFS-----ELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFR 55

Query: 59  RGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWT 118
           R   R+  F     + +D  SDL S      GEYLM++SIG+P V   AI DTGSDLIWT
Sbjct: 56  RSISRVNHFRPTDASPNDPQSDLIS----NGGEYLMNISIGTPPVPILAIADTGSDLIWT 111

Query: 119 QCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQE-CNANNACEYIYSYGDTSS 177
           QCKPC  C+ Q +P+FDPK+SS+Y  + C S+ C+AL  Q  C+  N C Y YSYGD S 
Sbjct: 112 QCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSF 171

Query: 178 SQGVLATETLTFGD-----VSVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKE 232
           ++G LA ETLT G      VS P I FGCG +N G    +G+G+VGLG GPLSL+SQL  
Sbjct: 172 TKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGS 231

Query: 233 P---KFSYCL--TSIDAAKTSTLLMGSLASANSSSSDQILTTPLI-KSPLQASFYYLPLE 286
               KFSYCL   S D+  TS +  G+  +A  S S  +++TPL+ K P   +FYYL LE
Sbjct: 232 SIGGKFSYCLVPLSSDSNGTSKINFGT--NAIVSGSG-VVSTPLVSKDP--DTFYYLTLE 286

Query: 287 GISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDA 346
            ISVG  +LP   +  +      G +IIDSGTTLT L          +F S+ + +V +A
Sbjct: 287 AISVGSKKLPY--TGSSKNGVEEGNIIIDSGTTLTLL--------PSDFYSELESAVEEA 336

Query: 347 AD-------QTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLA 399
                    Q  L +C+   S ++D+++P +  HF GADV L P N  +  S   L C A
Sbjct: 337 IGGERVSDPQGLLSLCY---SSTSDIKLPIITAHFTGADVKLQPLNTFVKVSE-DLVCFA 392

Query: 400 MGSSSGMSIFGNVQQQNMLVLYDLAKETLSFIPTQCDK 437
           M  +S ++IFGN+ Q N LV YDL  +T+SF PT C K
Sbjct: 393 MIPTSSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK 430

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 438
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.93
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.91
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.31
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.22
PF1365090 Asp_protease_2: Aspartyl protease 96.73
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.79
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.7
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 95.27
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 94.87
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 93.24
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 93.1
COG3577215 Predicted aspartyl protease [General function pred 91.4
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 90.91
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 90.14
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 89.09
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 86.37
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 83.57
PF1365090 Asp_protease_2: Aspartyl protease 81.38
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.6e-70  Score=547.48  Aligned_cols=396  Identities=43%  Similarity=0.743  Sum_probs=325.1

Q ss_pred             cccCCcceEEEEEecCCC------CCCChHHHHHHHHHhhHHHHHHHhhhccccccCCCccccceecCCccEEEEEEeCC
Q 013672           27 AFSASAGFKVKLKSVDFG------KKLSTFERVLHGMKRGQHRLQRFNAMSLAASDTASDLKSSVHAGTGEYLMDLSIGS  100 (438)
Q Consensus        27 ~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~Y~~~v~iGt  100 (438)
                      ..+...+++++|+|+++.      ++.+..++++++++|+++|.+++.++...    ......++...+++|+++|.|||
T Consensus        18 ~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Y~v~i~iGT   93 (431)
T PLN03146         18 AEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDAS----PNDPQSDLISNGGEYLMNISIGT   93 (431)
T ss_pred             ccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhcccc----CCccccCcccCCccEEEEEEcCC
Confidence            344556799999999863      24556799999999999999888644221    01222234467889999999999


Q ss_pred             CCceeeEEEecCCCcceEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCCC-CCCCCCcceEeeecCCCCeEE
Q 013672          101 PAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQ-ECNANNACEYIYSYGDTSSSQ  179 (438)
Q Consensus       101 P~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~f~p~~Sst~~~~~c~~~~c~~~~~~-~c~~~~~~~~~~~Y~dg~~~~  179 (438)
                      |+|++.|++||||+++||+|.+|..|..+.++.|||++|+||+.++|.++.|...+.. .|..++.|.|.+.|+||+.+.
T Consensus        94 Ppq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i~Ygdgs~~~  173 (431)
T PLN03146         94 PPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTK  173 (431)
T ss_pred             CCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEEEeCCCCcee
Confidence            9999999999999999999999999998888999999999999999999999877654 476666799999999999889


Q ss_pred             EEEEEEEEEECCc-----ccceeEEEeeEcCCCCCcCCcceeeecCCCCCcchhhccC---CeeeEeecCCCC--CcceE
Q 013672          180 GVLATETLTFGDV-----SVPNIGFGCGSDNEGDGFSQGAGLVGLGRGPLSLVSQLKE---PKFSYCLTSIDA--AKTST  249 (438)
Q Consensus       180 G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~sl~~ql~~---~~Fs~~l~~~~~--~~~g~  249 (438)
                      |.+++|+|++++.     .++++.|||++...+.+....+||||||++++|+++|+..   ++|||||.+..+  ...|.
T Consensus       174 G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~~~~~~~~g~  253 (431)
T PLN03146        174 GNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDSNGTSK  253 (431)
T ss_pred             eEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCCCCCCCCcce
Confidence            9999999999973     5889999999987764333679999999999999999653   589999975332  35799


Q ss_pred             EEeCCCccCCCCCC-CCeeeecCccCCCCCcceEEeeeeEEEcCeeeecCCCCcccccCCCCcEEEccccccccccHHHH
Q 013672          250 LLMGSLASANSSSS-DQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLIIDSGTTLTYLIDSAF  328 (438)
Q Consensus       250 l~fGg~d~~~~~~~-g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~  328 (438)
                      |+||+..  +  +. +.+.|+|++.+. .+.+|+|.|++|+||++++.++...+.  ..+.+++||||||++++||+++|
T Consensus       254 l~fG~~~--~--~~~~~~~~tPl~~~~-~~~~y~V~L~gIsVgg~~l~~~~~~~~--~~~~g~~iiDSGTt~t~Lp~~~y  326 (431)
T PLN03146        254 INFGTNA--I--VSGSGVVSTPLVSKD-PDTFYYLTLEAISVGSKKLPYTGSSKN--GVEEGNIIIDSGTTLTLLPSDFY  326 (431)
T ss_pred             EEeCCcc--c--cCCCCceEcccccCC-CCCeEEEeEEEEEECCEECcCCccccc--cCCCCcEEEeCCccceecCHHHH
Confidence            9999953  2  33 358999998642 257999999999999999887666553  24456799999999999999999


Q ss_pred             HHHHHHHHHhccCcccccCCCCCccceeecCCCCCccccceEEEEEcCcEEEeCCCCeEEEecCCCeEEEEEEcCCCcee
Q 013672          329 DLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPENYMIADSSMGLACLAMGSSSGMSI  408 (438)
Q Consensus       329 ~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~~Cl~~~~~~~~~i  408 (438)
                      +++.+++...+...... .....++.||.....   ..+|+|+|+|+|+++.|++++|+++. ..+..|+++.+..+.||
T Consensus       327 ~~l~~~~~~~~~~~~~~-~~~~~~~~C~~~~~~---~~~P~i~~~F~Ga~~~l~~~~~~~~~-~~~~~Cl~~~~~~~~~I  401 (431)
T PLN03146        327 SELESAVEEAIGGERVS-DPQGLLSLCYSSTSD---IKLPIITAHFTGADVKLQPLNTFVKV-SEDLVCFAMIPTSSIAI  401 (431)
T ss_pred             HHHHHHHHHHhccccCC-CCCCCCCccccCCCC---CCCCeEEEEECCCeeecCcceeEEEc-CCCcEEEEEecCCCceE
Confidence            99999998887532222 223346789985422   37899999999999999999999973 45678999887767899


Q ss_pred             ecHhhhcceEEEEECCCCEEEEeeCCCCCC
Q 013672          409 FGNVQQQNMLVLYDLAKETLSFIPTQCDKL  438 (438)
Q Consensus       409 lG~~fl~~~y~vfD~~~~~iGfa~~~c~~~  438 (438)
                      ||+.|||++|++||++++|||||+++|.++
T Consensus       402 lG~~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        402 FGNLAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             ECeeeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            999999999999999999999999999975

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
1htr_B329 Crystal And Molecular Structures Of Human Progastri 3e-11
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 4e-11
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 4e-11
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 5e-11
3vla_A413 Crystal Structure Of Edgp Length = 413 6e-10
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 7e-10
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 1e-09
1j71_A334 Structure Of The Extracellular Aspartic Proteinase 2e-09
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 8e-08
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 2e-07
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 1e-06
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 1e-06
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 1e-06
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 1e-06
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 1e-06
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 1e-06
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 2e-06
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 2e-06
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 2e-06
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 2e-06
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 1e-04
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 2e-04
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 2e-04
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 3e-04
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 3e-04
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 3e-04
3d91_A341 Human Renin In Complex With Remikiren Length = 341 3e-04
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 3e-04
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 3e-04
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 3e-04
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 4e-04
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 4e-04
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 8e-04
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure 
Iteration: 1

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 71/361 (19%)
Query: 92  YLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSAL 151
           Y  ++SIG+P  +F  + DTGS  +W     CQ     +   F+P ESS+YS        
Sbjct: 14  YFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYST------- 66
Query: 152 CKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGF- 210
                       N   +   YG  S + G    +TLT   + VPN  FG   +  G  F 
Sbjct: 67  ------------NGQTFSLQYGSGSLT-GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFV 113
Query: 211 -SQGAGLVGLGRGPLS----------LVSQ--LKEPKFSYCLTSIDAAKTSTLLMGXXXX 257
            +Q  G++GL    LS          +V +  L  P FS  L++   +    ++ G    
Sbjct: 114 YAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFG---- 169
Query: 258 XXXXXXDQILTTPLIKSPLQASFYY-LPLEGISVGGTRLPIDASNFALQEDGSGGLIIDS 316
                   + T  +  +P+    Y+ + +E   +GG      AS +    +G    I+D+
Sbjct: 170 ---GVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGG-----QASGWC--SEGCQA-IVDT 218
Query: 317 GTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTG--LDVCFKLPSGSTDVEVPKLVFHF 374
           GT+L          V ++++S    +     D+ G  L  C  + +      +P L F  
Sbjct: 219 GTSLL--------TVPQQYMSALLQATGAQEDEYGQFLVNCNSIQN------LPSLTFII 264
Query: 375 KGADVDLPPENYMIADS---SMGLACLAMGSSSG--MSIFGNVQQQNMLVLYDLAKETLS 429
            G +  LPP +Y+++++   ++G+    + S +G  + I G+V  ++   +YDL    + 
Sbjct: 265 NGVEFPLPPSSYILSNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVG 324
Query: 430 F 430
           F
Sbjct: 325 F 325
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 3e-98
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 8e-93
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-91
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-28
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-27
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 2e-27
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 6e-27
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-25
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-25
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-25
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 3e-25
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 6e-25
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 9e-25
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 3e-24
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 6e-24
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 6e-24
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-23
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 3e-23
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-23
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 3e-23
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 4e-23
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 5e-23
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 3e-22
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-21
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-21
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 3e-21
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 6e-21
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-20
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-20
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-19
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-19
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 8e-18
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 5e-09
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  299 bits (766), Expect = 3e-98
 Identities = 70/378 (18%), Positives = 129/378 (34%), Gaps = 33/378 (8%)

Query: 86  HAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKI 145
              TG +  +L   +P +    ++D   + +W  C+          P     + S  +  
Sbjct: 17  DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTH 76

Query: 146 PCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGD-----------VSV 194
            C S  C A  +  C+ N       +     +  G L  + L               V+V
Sbjct: 77  QCLS--CPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTV 134

Query: 195 PNIGFGCGSDNEGDG--FSQGAGLVGLGRGPLSLVSQLK-----EPKFSYCLTSIDAAKT 247
           P   F C               G+ GLG  P+SL +QL      + +F+ CL+    +  
Sbjct: 135 PQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTS-K 193

Query: 248 STLLMGSLASANSSSSDQILTTPLIKSPLQAS---FYYLPLEGISVGGTRL-PIDASNFA 303
             ++ G   +      +Q +   L  +PL  +    Y + +  I +    + P++  +  
Sbjct: 194 GAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISST 253

Query: 304 LQEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGST 363
           +    SGG +I + T    L  S +    + F  Q               +CF   +   
Sbjct: 254 IVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQ-VKSVAPFGLCFNS-NKIN 311

Query: 364 DVEVPKLVFHFK-GADVDLPPENYMIADSSMGLACLAMGSSS----GMSIFGNVQQQNML 418
                 LV     G    +  E+ M+  +  G+ CL + +           G  Q +  L
Sbjct: 312 AYPSVDLVMDKPNGPVWRISGEDLMV-QAQPGVTCLGVMNGGMQPRAEITLGARQLEENL 370

Query: 419 VLYDLAKETLSFIPTQCD 436
           V++DLA+  + F  +   
Sbjct: 371 VVFDLARSRVGFSTSSLH 388
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.89
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.7
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.9
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.68
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 94.56
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 87.4
2hs1_A99 HIV-1 protease; ultra-high resolution active site 87.22
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 85.04
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 81.11
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=2.7e-61  Score=475.86  Aligned_cols=304  Identities=24%  Similarity=0.408  Sum_probs=256.3

Q ss_pred             cccccee-cCCccEEEEEEeCCCCceeeEEEecCCCcceEeCCCCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCCC
Q 013672           80 DLKSSVH-AGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKIPCSSALCKALPQQ  158 (438)
Q Consensus        80 ~~~~p~~-~~~~~Y~~~v~iGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~f~p~~Sst~~~~~c~~~~c~~~~~~  158 (438)
                      ....|+. ..+.+|+++|+||||||+|.|++||||+++||+|..|..|.|..++.|||++|+||+...            
T Consensus        45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------  112 (370)
T 3psg_A           45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------  112 (370)
T ss_dssp             SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------
T ss_pred             cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC------------
Confidence            3456777 689999999999999999999999999999999999998777788999999999999875            


Q ss_pred             CCCCCCcceEeeecCCCCeEEEEEEEEEEEECCcccceeEEEeeEcCCCCCc--CCcceeeecCCCCCc----------c
Q 013672          159 ECNANNACEYIYSYGDTSSSQGVLATETLTFGDVSVPNIGFGCGSDNEGDGF--SQGAGLVGLGRGPLS----------L  226 (438)
Q Consensus       159 ~c~~~~~~~~~~~Y~dg~~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~--~~~~GIlGLg~~~~s----------l  226 (438)
                             |.|.+.|++|+ +.|.+++|+|++++..+++|.|||++...+..+  ...+||||||++.++          +
T Consensus       113 -------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l  184 (370)
T 3psg_A          113 -------QELSITYGTGS-MTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNL  184 (370)
T ss_dssp             -------EEEEEESSSCE-EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHH
T ss_pred             -------cEEEEEeCCce-EEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHHH
Confidence                   79999999997 999999999999999999999999998866323  368999999998765          3


Q ss_pred             hhh--ccCCeeeEeecCCCCCcceEEEeCCCccCCCCCCCCeeeecCccCCCCCcceEEeeeeEEEcCeeeecCCCCccc
Q 013672          227 VSQ--LKEPKFSYCLTSIDAAKTSTLLMGSLASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFAL  304 (438)
Q Consensus       227 ~~q--l~~~~Fs~~l~~~~~~~~g~l~fGg~d~~~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~  304 (438)
                      .+|  +.+++||+||.+. ....|.|+|||+|+++  |.|++.|+|+..    ..+|.|.+++|+|+++.+....     
T Consensus       185 ~~qg~i~~~~FS~~L~~~-~~~~G~l~fGg~D~~~--y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~~-----  252 (370)
T 3psg_A          185 WDQGLVSQDLFSVYLSSN-DDSGSVVLLGGIDSSY--YTGSLNWVPVSV----EGYWQITLDSITMDGETIACSG-----  252 (370)
T ss_dssp             HHTTCSSSSEEEEEEC------CEEEEETCCCGGG--BSSCCEEEECSE----ETTEEEEECEEESSSSEEECTT-----
T ss_pred             HHCCCCCCCEEEEEEccC-CCCCeEEEEEeeChHh--cCCcceeecccc----cceeEEEEeEEEECCEEEecCC-----
Confidence            344  6779999999985 2467999999999998  899999999974    5799999999999998765322     


Q ss_pred             ccCCCCcEEEccccccccccHHHHHHHHHHHHHhccCcccccCCCCCccceeecCCCCCccccceEEEEEcCcEEEeCCC
Q 013672          305 QEDGSGGLIIDSGTTLTYLIDSAFDLVKKEFISQTKLSVTDAADQTGLDVCFKLPSGSTDVEVPKLVFHFKGADVDLPPE  384 (438)
Q Consensus       305 ~~~~~~~~iiDTGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~f~f~g~~~~l~~~  384 (438)
                          .+.+||||||+++++|++++++|.+++++...        .   ..+|.++|+.. ..+|+|+|+|+|.+++||++
T Consensus       253 ----~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~--------~---~g~~~v~C~~~-~~lP~i~f~~~g~~~~l~~~  316 (370)
T 3psg_A          253 ----GCQAIVDTGTSLLTGPTSAIANIQSDIGASEN--------S---DGEMVISCSSI-DSLPDIVFTIDGVQYPLSPS  316 (370)
T ss_dssp             ----CEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC--------T---TCCEECCGGGG-GGCCCEEEEETTEEEEECHH
T ss_pred             ----CceEEEcCCCCcEECCHHHHHHHHHHhCCccc--------C---CCcEEEECCCc-ccCCcEEEEECCEEEEECHH
Confidence                24799999999999999999999999976521        1   12366666643 47899999999999999999


Q ss_pred             CeEEEecCCCeEEEE-EEcC------CCceeecHhhhcceEEEEECCCCEEEEeeCC
Q 013672          385 NYMIADSSMGLACLA-MGSS------SGMSIFGNVQQQNMLVLYDLAKETLSFIPTQ  434 (438)
Q Consensus       385 ~y~~~~~~~~~~Cl~-~~~~------~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~  434 (438)
                      +|+++  . ...|+. +++.      +..||||++|||++|+|||++++|||||+++
T Consensus       317 ~yi~~--~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          317 AYILQ--D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             HHEEE--C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             Hhccc--C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence            99997  2 345976 6542      2359999999999999999999999999975
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 438
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 8e-56
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-44
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-41
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-41
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 4e-39
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 5e-39
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-38
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-38
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 3e-38
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-37
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 4e-36
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-35
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 1e-35
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 1e-35
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-35
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 2e-35
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 2e-35
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-34
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-34
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 5e-33
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 9e-31
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-27
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  187 bits (475), Expect = 8e-56
 Identities = 62/376 (16%), Positives = 118/376 (31%), Gaps = 47/376 (12%)

Query: 86  HAGTGEYLMDLSIGSPAVSFSAILDTGSDLIWTQCKPCQVCFDQATPIFDPKESSSYSKI 145
              T  Y +    G+  V     LD    L+W+ C   Q   +          +++Y   
Sbjct: 10  DPATSLYTIPFHDGASLV-----LDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAP 64

Query: 146 PCSSALCKALPQQECNANNACEYIYSYGDTSSSQGVLATETLTFGDVS--------VPNI 197
            C +  C +    + +      Y Y+    + + G L+                     +
Sbjct: 65  GCPAPSCGS----DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGV 120

Query: 198 GFGCGSDNEGDGFSQGA-GLVGLGRGPLSLVSQLK-EPKFSYCLTSIDAAKTS-TLLMGS 254
              C          +G+ G+ GL    L+L +Q+    K +               + G 
Sbjct: 121 LAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGG 180

Query: 255 LASANSSSSDQILTTPLIKSPLQASFYYLPLEGISVGGTRLPIDASNFALQEDGSGGLII 314
                   +  +  TPL+     +  +Y+    I VG TR+P+           +GG+++
Sbjct: 181 GPVPWPQFTQSMPYTPLVTKG-GSPAHYISARSIVVGDTRVPVPEGAL-----ATGGVML 234

Query: 315 DSGTTLTYLIDSAFDLVKKEFISQTKLS-------VTDAADQTGLDVCFKLP---SGSTD 364
            +      L    +  +   F                         VC+      +    
Sbjct: 235 STRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGG 294

Query: 365 VEVPKLVFHFK-GADVDLPPENYMIADSSMGLACLAMGSSSGM---------SIFGNVQQ 414
             VP +      G+D  +  +N M+ D   G AC+A     G+          I G  Q 
Sbjct: 295 YAVPNVQLGLDGGSDWTMTGKNSMV-DVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQM 353

Query: 415 QNMLVLYDLAKETLSF 430
           ++ ++ +D+ K+ L F
Sbjct: 354 EDFVLDFDMEKKRLGF 369
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 84.16
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 82.28
d3ecga199 Human immunodeficiency virus type 2 (HIV-2) protea 81.9
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 80.52
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure