Citrus Sinensis ID: 013768

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------
MNQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQMPSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
cccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEcccccccccEEEEEEEEEcccccccccccEEEccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEccccccHHccccccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHccccccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcc
ccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHccccHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccEEEEccccccccccccccccccccccccccccccccccccccccHHHEEEEEEccccccccccHHHHHHHcccccccccccEEEccccccccccccccccEEEccccccccccccccccccccccccHHHccccccHccccccccccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mnqrrsppkhrhdgtsplplgmdwspaprkwngrdtvwphdprtgwsycvtipswvvlpksrdsdpvVFYRVQVglqspegitttRGVLRRFNNFLKLFTDLKkafpkknippappkgllRMKSRALLEERRCSLEEWMTKLLSdidlsrsvsVASFLELEAAARSSFQdvnqnaseanpssnstisslqmpsdsgftligsssvtsdygsdtayetselgtpklgrdngseigvedltldedltspIENLVKYGMSNIDEGLFMGQTILEQlegfprhkahaqqhpnnatgknvnngnvsKALFlsgngmdlfsepepgkvigharklsadsvrsdassirgseisnfgipnssadgspglhrcaevsssreilgnsdlqfsgdaelvipldqrHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
mnqrrsppkhrhdgtsplplgmdWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQvglqspegitttrgvLRRFNNFLKLFTdlkkafpkknippappkgllrmKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQMPSDSGFTLIGSSSVTSDYGSDTayetselgtpklgrdnGSEIGvedltldedlTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHpnnatgknvnngNVSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSirgseisnfgipnssadgsPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLItrlnqemtvkdylmtkv
MNQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQMPSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPnnatgknvnngnvSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
*****************************KWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKK**************************RRCSLEEWMTKLLSDIDLSRSVSVASFLEL*****************************************************************************LTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEG*********************************************************************************************************QFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTV********
***************************************HDPRTGWSYCVTI**************VVFYRVQVGLQS*E**TTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAA****************************************************************************************************************************************************************************************************************************GDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
*************GTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDV*****************LQMPSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFSEPEPGKVIGHARK************IRGSEISNFGIPNSSADGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
******************PLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQ***********************FTLIGSSSVTSDYGSDTAYETSELGTPKL**D*GSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFS***********************************************HR*AEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQMPSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query437
255548876 710 conserved hypothetical protein [Ricinus 0.993 0.611 0.775 0.0
224143168 713 predicted protein [Populus trichocarpa] 0.995 0.610 0.764 0.0
356507680 724 PREDICTED: uncharacterized protein LOC10 0.993 0.599 0.724 0.0
359475826 717 PREDICTED: uncharacterized protein LOC10 0.993 0.605 0.761 0.0
224092502 669 predicted protein [Populus trichocarpa] 0.945 0.617 0.748 0.0
356518242 721 PREDICTED: uncharacterized protein LOC10 0.993 0.601 0.708 0.0
357466161 705 hypothetical protein MTR_3g106770 [Medic 0.993 0.615 0.701 1e-179
449524486 727 PREDICTED: uncharacterized protein LOC10 0.979 0.588 0.705 1e-167
449437156 728 PREDICTED: uncharacterized protein LOC10 0.979 0.587 0.705 1e-167
42567325 723 Phox (PX) domain-containing protein [Ara 0.979 0.591 0.657 1e-158
>gi|255548876|ref|XP_002515494.1| conserved hypothetical protein [Ricinus communis] gi|223545438|gb|EEF46943.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/436 (77%), Positives = 384/436 (88%), Gaps = 2/436 (0%)

Query: 3   QRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPKSR 62
           QRRSPPKHRHDGTSPLPLGMDWSP PRKWNGR+T+WPHDPR+GWSYCV IPSWVVLPKSR
Sbjct: 2   QRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGRNTIWPHDPRSGWSYCVIIPSWVVLPKSR 61

Query: 63  DSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRM 122
           DSDPVVFYRVQ+GLQSPEG+TTTRGVLRRFN+FLKL+TDLK++FPKKN+PPAPPKGLLR+
Sbjct: 62  DSDPVVFYRVQIGLQSPEGVTTTRGVLRRFNDFLKLYTDLKRSFPKKNLPPAPPKGLLRL 121

Query: 123 KSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSS 182
           KSRALLEERRCSLEEWMTKLLSDIDLSRS++VASFLELEAAARSSFQDVNQ  SEA+P++
Sbjct: 122 KSRALLEERRCSLEEWMTKLLSDIDLSRSMAVASFLELEAAARSSFQDVNQQLSEASPAA 181

Query: 183 NSTISSLQMPSDSGFTL-IGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLD 241
           +   SSLQ+P +S  +L +GSSSVTSDYGSDTAYETSELGTP+LGRD   ++G+EDLTLD
Sbjct: 182 DRATSSLQIPLNSTSSLNVGSSSVTSDYGSDTAYETSELGTPRLGRDEQCDVGIEDLTLD 241

Query: 242 EDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVS 301
           EDLT+PIE LVKYGMSNIDEGLFMGQTILEQLEG PRHK HA  H NN TGK+  NGN S
Sbjct: 242 EDLTNPIEKLVKYGMSNIDEGLFMGQTILEQLEGLPRHKPHA-THMNNVTGKDTYNGNAS 300

Query: 302 KALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPG 361
           +  F + NGM+LFSE EPGKV GH RKLS++SV SD SS+RGSEISN G PN S DGS  
Sbjct: 301 RISFPASNGMELFSETEPGKVFGHGRKLSSESVGSDGSSLRGSEISNSGTPNLSGDGSLD 360

Query: 362 LHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLIT 421
           L    +VSS   ILG+++LQFSGDA++++P DQR K++R LLTM+RRLVTAKTDMEDLI 
Sbjct: 361 LPGGVDVSSVAGILGSAELQFSGDAQIILPSDQRQKMNRALLTMQRRLVTAKTDMEDLIA 420

Query: 422 RLNQEMTVKDYLMTKV 437
           RL+QE+ VKDYL TKV
Sbjct: 421 RLHQEIAVKDYLTTKV 436

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224143168|ref|XP_002324868.1| predicted protein [Populus trichocarpa] gi|222866302|gb|EEF03433.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356507680|ref|XP_003522592.1| PREDICTED: uncharacterized protein LOC100792151 [Glycine max] Back     alignment and taxonomy information
>gi|359475826|ref|XP_002285195.2| PREDICTED: uncharacterized protein LOC100267879 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224092502|ref|XP_002309637.1| predicted protein [Populus trichocarpa] gi|222855613|gb|EEE93160.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356518242|ref|XP_003527788.1| PREDICTED: uncharacterized protein LOC100789039 [Glycine max] Back     alignment and taxonomy information
>gi|357466161|ref|XP_003603365.1| hypothetical protein MTR_3g106770 [Medicago truncatula] gi|355492413|gb|AES73616.1| hypothetical protein MTR_3g106770 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449524486|ref|XP_004169253.1| PREDICTED: uncharacterized protein LOC101226924 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449437156|ref|XP_004136358.1| PREDICTED: uncharacterized protein LOC101209349 [Cucumis sativus] Back     alignment and taxonomy information
>gi|42567325|ref|NP_567888.2| Phox (PX) domain-containing protein [Arabidopsis thaliana] gi|332660612|gb|AEE86012.1| Phox (PX) domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query437
TAIR|locus:2116687 723 AT4G32160 [Arabidopsis thalian 0.979 0.591 0.639 1e-139
TAIR|locus:2040030 643 AT2G25350 [Arabidopsis thalian 0.956 0.650 0.591 1.4e-128
TAIR|locus:2093915 755 AT3G15920 [Arabidopsis thalian 0.597 0.345 0.551 7.2e-86
DICTYBASE|DDB_G0271844 1603 DDB_G0271844 "Rho GTPase domai 0.407 0.111 0.261 4.4e-05
TAIR|locus:2116687 AT4G32160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 282/441 (63%), Positives = 332/441 (75%)

Query:     1 MNQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHDPRTGWSYCVTIPSWVVLPK 60
             M QRRSPPKHRHDGTSPLPLGMDWSP PRKWNGRDTVWPHDPRTGWSYCVTIPSW+VLPK
Sbjct:     1 MMQRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGRDTVWPHDPRTGWSYCVTIPSWIVLPK 60

Query:    61 SRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLL 120
             SR+SDPVVFYRVQV +QSPEGITT RGVLRRFN+FLKL TDLK+ FP+K  P APPKGLL
Sbjct:    61 SRNSDPVVFYRVQVSVQSPEGITTMRGVLRRFNDFLKLLTDLKRTFPRKGFPSAPPKGLL 120

Query:   121 RMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANP 180
             RMKSRA+LEERRCSLEEW+TKLLSDI+L+RSV VASFLELEAAARS+ QDV+QNAS++N 
Sbjct:   121 RMKSRAVLEERRCSLEEWITKLLSDIELARSVVVASFLELEAAARSACQDVDQNASDSNN 180

Query:   181 SSNSTISSLQM-PSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLT 239
               +ST SS  + PS S F   G S++TSDYGSDTAYETSE+G+P +G+D+ SEIG EDLT
Sbjct:   181 DRSSTSSSPMVHPSLSLFHA-GGSTLTSDYGSDTAYETSEVGSPSVGQDDISEIGTEDLT 239

Query:   240 LDEDLT--SPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPXXXXXXXXXX 297
             LDEDLT  +PIE LV + MSNIDEGL M +TILEQLE FP+HK  ++ +           
Sbjct:   240 LDEDLTLTNPIEKLVNFSMSNIDEGLSMSETILEQLEDFPKHKVRSR-YVNNILGKDVYN 298

Query:   298 XXXSKALFLSGNGMDLFSEPEPGK-VIGHARKLSADSVRSDASSIRGSEISNFGIPNSSA 356
                SK +FL+ NG  L SEPEP    + H R  SA+       ++   + S  G+  SS 
Sbjct:   299 GNASKGVFLANNGSRLLSEPEPSTHSVMHDRNDSAERF-----ALHTGQTSTSGLLISSR 353

Query:   357 DGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDM 416
             D    L +   VS    ++ N + Q  G A++V+PL+ R+KL+R+LL    RLV AKTDM
Sbjct:   354 DSHLDLRQGPGVSLGTGLVCNPERQ--GSAQIVLPLELRNKLNRILLATNERLVNAKTDM 411

Query:   417 EDLITRLNQEMTVKDYLMTKV 437
             EDLI RLNQE+ VKDYL  KV
Sbjct:   412 EDLIARLNQEIAVKDYLNKKV 432
GO:0005576 "extracellular region" evidence=ISM
GO:0007154 "cell communication" evidence=IEA
GO:0035091 "phosphatidylinositol binding" evidence=IEA;ISS
GO:0007165 "signal transduction" evidence=ISS
TAIR|locus:2040030 AT2G25350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093915 AT3G15920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271844 DDB_G0271844 "Rho GTPase domain containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00180449
hypothetical protein (713 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query437
cd06879138 cd06879, PX_UP1_plant, The phosphoinositide bindin 2e-67
cd06093106 cd06093, PX_domain, The Phox Homology domain, a ph 2e-21
pfam00787109 pfam00787, PX, PX domain 4e-19
smart00312105 smart00312, PX, PhoX homologous domain, present in 5e-16
cd06885104 cd06885, PX_SNX17_31, The phosphoinositide binding 2e-08
cd06897108 cd06897, PX_SNARE, The phosphoinositide binding Ph 4e-08
cd06876133 cd06876, PX_MDM1p, The phosphoinositide binding Ph 9e-08
cd06866105 cd06866, PX_SNX8_Mvp1p_like, The phosphoinositide 1e-07
cd06859114 cd06859, PX_SNX1_2_like, The phosphoinositide bind 2e-07
cd07280120 cd07280, PX_YPT35, The phosphoinositide binding Ph 2e-07
cd06878127 cd06878, PX_SNX25, The phosphoinositide binding Ph 5e-07
cd06869119 cd06869, PX_UP2_fungi, The phosphoinositide bindin 2e-06
cd06873120 cd06873, PX_SNX13, The phosphoinositide binding Ph 6e-06
cd07277118 cd07277, PX_RUN, The phosphoinositide binding Phox 1e-05
cd06865120 cd06865, PX_SNX_like, The phosphoinositide binding 2e-05
cd07281124 cd07281, PX_SNX1, The phosphoinositide binding Pho 5e-05
cd06893132 cd06893, PX_SNX19, The phosphoinositide binding Ph 7e-05
cd06862125 cd06862, PX_SNX9_18_like, The phosphoinositide bin 1e-04
cd06874127 cd06874, PX_KIF16B_SNX23, The phosphoinositide bin 1e-04
cd07295116 cd07295, PX_Grd19, The phosphoinositide binding Ph 1e-04
COG5391524 COG5391, COG5391, Phox homology (PX) domain protei 2e-04
cd06877119 cd06877, PX_SNX14, The phosphoinositide binding Ph 2e-04
cd06875116 cd06875, PX_IRAS, The phosphoinositide binding Pho 3e-04
cd07276110 cd07276, PX_SNX16, The phosphoinositide binding Ph 3e-04
cd06861112 cd06861, PX_Vps5p, The phosphoinositide binding Ph 4e-04
cd06880110 cd06880, PX_SNX22, The phosphoinositide binding Ph 7e-04
cd06886106 cd06886, PX_SNX27, The phosphoinositide binding Ph 7e-04
cd06868120 cd06868, PX_HS1BP3, The phosphoinositide binding P 0.001
cd06871120 cd06871, PX_MONaKA, The phosphoinositide binding P 0.001
cd07279112 cd07279, PX_SNX20_21_like, The phosphoinositide bi 0.001
cd06863118 cd06863, PX_Atg24p, The phosphoinositide binding P 0.002
cd06870109 cd06870, PX_CISK, The phosphoinositide binding Pho 0.002
cd06860116 cd06860, PX_SNX7_30_like, The phosphoinositide bin 0.002
>gnl|CDD|132789 cd06879, PX_UP1_plant, The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins Back     alignment and domain information 
 Score =  211 bits (537), Expect = 2e-67
 Identities = 96/138 (69%), Positives = 102/138 (73%), Gaps = 24/138 (17%)

Query: 48  YCVTIPSWVVLPKSRDSDPVV------------------------FYRVQVGLQSPEGIT 83
           YCV IPSWVVLPKS++SD                           FYRVQVG+QSPEGIT
Sbjct: 1   YCVFIPSWVVLPKSKESDGKAINPKVGNMSVVYSEYQPLNNAVDKFYRVQVGVQSPEGIT 60

Query: 84  TTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLL 143
           T RGVLRRFN+FLKL TDLKK FPKK +P APPKGLLRMK+RALLEERR SLEEWM KLL
Sbjct: 61  TMRGVLRRFNDFLKLHTDLKKLFPKKKLPAAPPKGLLRMKNRALLEERRHSLEEWMGKLL 120

Query: 144 SDIDLSRSVSVASFLELE 161
           SDIDLSRSV VASFLELE
Sbjct: 121 SDIDLSRSVPVASFLELE 138

The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction. Length = 138
>gnl|CDD|132768 cd06093, PX_domain, The Phox Homology domain, a phosphoinositide binding module Back     alignment and domain information
>gnl|CDD|216119 pfam00787, PX, PX domain Back     alignment and domain information
>gnl|CDD|214610 smart00312, PX, PhoX homologous domain, present in p47phox and p40phox Back     alignment and domain information
>gnl|CDD|132795 cd06885, PX_SNX17_31, The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31 Back     alignment and domain information
>gnl|CDD|132807 cd06897, PX_SNARE, The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi Back     alignment and domain information
>gnl|CDD|132786 cd06876, PX_MDM1p, The phosphoinositide binding Phox Homology domain of yeast MDM1p Back     alignment and domain information
>gnl|CDD|132776 cd06866, PX_SNX8_Mvp1p_like, The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p Back     alignment and domain information
>gnl|CDD|132769 cd06859, PX_SNX1_2_like, The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2 Back     alignment and domain information
>gnl|CDD|132813 cd07280, PX_YPT35, The phosphoinositide binding Phox Homology domain of the fungal protein YPT35 Back     alignment and domain information
>gnl|CDD|132788 cd06878, PX_SNX25, The phosphoinositide binding Phox Homology domain of Sorting Nexin 25 Back     alignment and domain information
>gnl|CDD|132779 cd06869, PX_UP2_fungi, The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins Back     alignment and domain information
>gnl|CDD|132783 cd06873, PX_SNX13, The phosphoinositide binding Phox Homology domain of Sorting Nexin 13 Back     alignment and domain information
>gnl|CDD|132810 cd07277, PX_RUN, The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains Back     alignment and domain information
>gnl|CDD|132775 cd06865, PX_SNX_like, The phosphoinositide binding Phox Homology domain of SNX-like proteins Back     alignment and domain information
>gnl|CDD|132814 cd07281, PX_SNX1, The phosphoinositide binding Phox Homology domain of Sorting Nexin 1 Back     alignment and domain information
>gnl|CDD|132803 cd06893, PX_SNX19, The phosphoinositide binding Phox Homology domain of Sorting Nexin 19 Back     alignment and domain information
>gnl|CDD|132772 cd06862, PX_SNX9_18_like, The phosphoinositide binding Phox Homology domain of Sorting Nexins 9 and 18 Back     alignment and domain information
>gnl|CDD|132784 cd06874, PX_KIF16B_SNX23, The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23 Back     alignment and domain information
>gnl|CDD|132828 cd07295, PX_Grd19, The phosphoinositide binding Phox Homology domain of fungal Grd19 Back     alignment and domain information
>gnl|CDD|227680 COG5391, COG5391, Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] Back     alignment and domain information
>gnl|CDD|132787 cd06877, PX_SNX14, The phosphoinositide binding Phox Homology domain of Sorting Nexin 14 Back     alignment and domain information
>gnl|CDD|132785 cd06875, PX_IRAS, The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected Back     alignment and domain information
>gnl|CDD|132809 cd07276, PX_SNX16, The phosphoinositide binding Phox Homology domain of Sorting Nexin 16 Back     alignment and domain information
>gnl|CDD|132771 cd06861, PX_Vps5p, The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps5p Back     alignment and domain information
>gnl|CDD|132790 cd06880, PX_SNX22, The phosphoinositide binding Phox Homology domain of Sorting Nexin 22 Back     alignment and domain information
>gnl|CDD|132796 cd06886, PX_SNX27, The phosphoinositide binding Phox Homology domain of Sorting Nexin 27 Back     alignment and domain information
>gnl|CDD|132778 cd06868, PX_HS1BP3, The phosphoinositide binding Phox Homology domain of HS1BP3 Back     alignment and domain information
>gnl|CDD|132781 cd06871, PX_MONaKA, The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase Back     alignment and domain information
>gnl|CDD|132812 cd07279, PX_SNX20_21_like, The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21 Back     alignment and domain information
>gnl|CDD|132773 cd06863, PX_Atg24p, The phosphoinositide binding Phox Homology domain of yeast Atg24p, an autophagic degradation protein Back     alignment and domain information
>gnl|CDD|132780 cd06870, PX_CISK, The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase Back     alignment and domain information
>gnl|CDD|132770 cd06860, PX_SNX7_30_like, The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 437
cd06879138 PX_UP1_plant The phosphoinositide binding Phox Hom 99.96
cd06877119 PX_SNX14 The phosphoinositide binding Phox Homolog 99.93
cd06861112 PX_Vps5p The phosphoinositide binding Phox Homolog 99.92
cd07280120 PX_YPT35 The phosphoinositide binding Phox Homolog 99.92
cd06865120 PX_SNX_like The phosphoinositide binding Phox Homo 99.91
cd07276110 PX_SNX16 The phosphoinositide binding Phox Homolog 99.91
cd06897108 PX_SNARE The phosphoinositide binding Phox Homolog 99.91
cd06868120 PX_HS1BP3 The phosphoinositide binding Phox Homolo 99.91
cd06873120 PX_SNX13 The phosphoinositide binding Phox Homolog 99.91
cd07281124 PX_SNX1 The phosphoinositide binding Phox Homology 99.9
cd06898113 PX_SNX10 The phosphoinositide binding Phox Homolog 99.9
cd06870109 PX_CISK The phosphoinositide binding Phox Homology 99.9
cd06886106 PX_SNX27 The phosphoinositide binding Phox Homolog 99.9
cd07301112 PX_SNX21 The phosphoinositide binding Phox Homolog 99.9
cd07295116 PX_Grd19 The phosphoinositide binding Phox Homolog 99.9
cd07282124 PX_SNX2 The phosphoinositide binding Phox Homology 99.9
cd06863118 PX_Atg24p The phosphoinositide binding Phox Homolo 99.9
cd07300114 PX_SNX20 The phosphoinositide binding Phox Homolog 99.9
cd06864129 PX_SNX4 The phosphoinositide binding Phox Homology 99.9
cd06881117 PX_SNX15_like The phosphoinositide binding Phox Ho 99.9
cd07279112 PX_SNX20_21_like The phosphoinositide binding Phox 99.9
cd06859114 PX_SNX1_2_like The phosphoinositide binding Phox H 99.9
cd06860116 PX_SNX7_30_like The phosphoinositide binding Phox 99.9
cd06862125 PX_SNX9_18_like The phosphoinositide binding Phox 99.89
cd06894123 PX_SNX3_like The phosphoinositide binding Phox Hom 99.89
cd06867112 PX_SNX41_42 The phosphoinositide binding Phox Homo 99.89
cd07293123 PX_SNX3 The phosphoinositide binding Phox Homology 99.89
cd06876133 PX_MDM1p The phosphoinositide binding Phox Homolog 99.89
cd06878127 PX_SNX25 The phosphoinositide binding Phox Homolog 99.89
cd07286127 PX_SNX18 The phosphoinositide binding Phox Homolog 99.89
cd06875116 PX_IRAS The phosphoinositide binding Phox Homology 99.89
cd07283116 PX_SNX30 The phosphoinositide binding Phox Homolog 99.89
cd06872107 PX_SNX19_like_plant The phosphoinositide binding P 99.89
cd06893132 PX_SNX19 The phosphoinositide binding Phox Homolog 99.89
cd06880110 PX_SNX22 The phosphoinositide binding Phox Homolog 99.89
cd07294132 PX_SNX12 The phosphoinositide binding Phox Homolog 99.89
cd07284116 PX_SNX7 The phosphoinositide binding Phox Homology 99.88
cd06885104 PX_SNX17_31 The phosphoinositide binding Phox Homo 99.87
cd06866105 PX_SNX8_Mvp1p_like The phosphoinositide binding Ph 99.87
cd07285126 PX_SNX9 The phosphoinositide binding Phox Homology 99.87
cd07288118 PX_SNX15 The phosphoinositide binding Phox Homolog 99.87
cd07277118 PX_RUN The phosphoinositide binding Phox Homology 99.87
cd07287118 PX_RPK118_like The phosphoinositide binding Phox H 99.86
cd06871120 PX_MONaKA The phosphoinositide binding Phox Homolo 99.83
cd06883109 PX_PI3K_C2 The phosphoinositide binding Phox Homol 99.83
cd06869119 PX_UP2_fungi The phosphoinositide binding Phox Hom 99.83
cd06093106 PX_domain The Phox Homology domain, a phosphoinosi 99.83
smart00312105 PX PhoX homologous domain, present in p47phox and 99.83
cd06882123 PX_p40phox The phosphoinositide binding Phox Homol 99.82
cd06874127 PX_KIF16B_SNX23 The phosphoinositide binding Phox 99.82
cd06891140 PX_Vps17p The phosphoinositide binding Phox Homolo 99.82
cd06884111 PX_PI3K_C2_68D The phosphoinositide binding Phox H 99.78
PF00787113 PX: PX domain; InterPro: IPR001683 The PX (phox) d 99.77
KOG2527144 consensus Sorting nexin SNX11 [Intracellular traff 99.76
cd07291141 PX_SNX5 The phosphoinositide binding Phox Homology 99.74
cd06892141 PX_SNX5_like The phosphoinositide binding Phox Hom 99.74
cd06895140 PX_PLD The phosphoinositide binding Phox Homology 99.73
cd07289109 PX_PI3K_C2_alpha The phosphoinositide binding Phox 99.73
cd06890112 PX_Bem1p The phosphoinositide binding Phox Homolog 99.71
cd07290109 PX_PI3K_C2_beta The phosphoinositide binding Phox 99.71
cd07292141 PX_SNX6 The phosphoinositide binding Phox Homology 99.7
cd06887118 PX_p47phox The phosphoinositide binding Phox Homol 99.7
cd06888119 PX_FISH The phosphoinositide binding Phox Homology 99.68
KOG2273503 consensus Membrane coat complex Retromer, subunit 99.62
cd07296135 PX_PLD1 The phosphoinositide binding Phox Homology 99.55
KOG2528490 consensus Sorting nexin SNX9/SH3PX1 and related pr 99.54
cd06889121 PX_NoxO1 The phosphoinositide binding Phox Homolog 99.4
KOG1259490 consensus Nischarin, modulator of integrin alpha5 99.3
cd06896101 PX_PI3K_C2_gamma The phosphoinositide binding Phox 99.3
COG5391524 Phox homology (PX) domain protein [Intracellular t 99.25
KOG3784407 consensus Sorting nexin protein SNX27 [General fun 98.96
cd07297130 PX_PLD2 The phosphoinositide binding Phox Homology 98.89
KOG2101362 consensus Intermediate filament-like protein, sort 98.41
KOG09051639 consensus Phosphoinositide 3-kinase [Signal transd 98.28
cd07298115 PX_RICS The phosphoinositide binding Phox Homology 97.68
KOG4773386 consensus NADPH oxidase [Energy production and con 97.36
cd07278114 PX_RICS_like The phosphoinositide binding Phox Hom 96.96
cd07299113 PX_TCGAP The phosphoinositide binding Phox Homolog 96.48
KOG1660399 consensus Sorting nexin SNX6/TFAF2, contains PX do 95.81
PLN02866 1068 phospholipase D 87.21
>cd06879 PX_UP1_plant The phosphoinositide binding Phox Homology domain of uncharacterized plant proteins Back     alignment and domain information 
Probab=99.96  E-value=5.6e-30  Score=229.63  Aligned_cols=114  Identities=84%  Similarity=1.289  Sum_probs=109.0

Q ss_pred             EEEEeCCeEeccCCCCCCCeE------------------------EEEEEEeeecCCCCCcceEEEccchhHHHHHHHHH
Q 013768           48 YCVTIPSWVVLPKSRDSDPVV------------------------FYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLK  103 (437)
Q Consensus        48 y~VsIPSw~~v~~s~~sk~yV------------------------vY~IqV~vqspeg~~~~w~V~RRYSDF~~Lh~~Lk  103 (437)
                      |||.||||.++++++++++.+                        +|.|+|+++++++....|.|.||||||++||++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~VqV~v~~~~~~~~~w~V~RRYSDF~~L~~~L~   80 (138)
T cd06879           1 YCVFIPSWVVLPKSKESDGKAINPKVGNMSVVYSEYQPLNNAVDKFYRVQVGVQSPEGITTMRGVLRRFNDFLKLHTDLK   80 (138)
T ss_pred             CcEeccceeEeccccCCCCccccccccccccceeeeecccCCceEEEEEEEeecCCCCcceeeeeecCchHHHHHHHHHH
Confidence            799999999999998888766                        99999999999998999999999999999999999


Q ss_pred             HHCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHhcccCcCCCHHHHhccCcc
Q 013768          104 KAFPKKNIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELE  161 (437)
Q Consensus       104 k~fp~~~LPpLPpK~l~r~~d~efLEERR~aLE~YLq~LLs~P~L~~S~~V~eFLele  161 (437)
                      +.||...+||+|+|+++++++++|||+||.+||+||++|+++|.+++++.|++||+++
T Consensus        81 ~~~p~~~lPplPpK~~l~~~~~~fiEeRR~gLE~fLq~Ll~~p~l~~s~~v~~FLele  138 (138)
T cd06879          81 KLFPKKKLPAAPPKGLLRMKNRALLEERRHSLEEWMGKLLSDIDLSRSVPVASFLELE  138 (138)
T ss_pred             HHCCCCcCCCCCCcccccCCCHHHHHHHHHHHHHHHHHHHcCccccCCHHHHHHhCCC
Confidence            9999889999999999888899999999999999999999999999999999999986

The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized fungal proteins containing a PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.
>cd06877 PX_SNX14 The phosphoinositide binding Phox Homology domain of Sorting Nexin 14 Back     alignment and domain information
>cd06861 PX_Vps5p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps5p Back     alignment and domain information
>cd07280 PX_YPT35 The phosphoinositide binding Phox Homology domain of the fungal protein YPT35 Back     alignment and domain information
>cd06865 PX_SNX_like The phosphoinositide binding Phox Homology domain of SNX-like proteins Back     alignment and domain information
>cd07276 PX_SNX16 The phosphoinositide binding Phox Homology domain of Sorting Nexin 16 Back     alignment and domain information
>cd06897 PX_SNARE The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi Back     alignment and domain information
>cd06868 PX_HS1BP3 The phosphoinositide binding Phox Homology domain of HS1BP3 Back     alignment and domain information
>cd06873 PX_SNX13 The phosphoinositide binding Phox Homology domain of Sorting Nexin 13 Back     alignment and domain information
>cd07281 PX_SNX1 The phosphoinositide binding Phox Homology domain of Sorting Nexin 1 Back     alignment and domain information
>cd06898 PX_SNX10 The phosphoinositide binding Phox Homology domain of Sorting Nexin 10 Back     alignment and domain information
>cd06870 PX_CISK The phosphoinositide binding Phox Homology Domain of Cytokine-Independent Survival Kinase Back     alignment and domain information
>cd06886 PX_SNX27 The phosphoinositide binding Phox Homology domain of Sorting Nexin 27 Back     alignment and domain information
>cd07301 PX_SNX21 The phosphoinositide binding Phox Homology domain of Sorting Nexin 21 Back     alignment and domain information
>cd07295 PX_Grd19 The phosphoinositide binding Phox Homology domain of fungal Grd19 Back     alignment and domain information
>cd07282 PX_SNX2 The phosphoinositide binding Phox Homology domain of Sorting Nexin 2 Back     alignment and domain information
>cd06863 PX_Atg24p The phosphoinositide binding Phox Homology domain of yeast Atg24p, an autophagic degradation protein Back     alignment and domain information
>cd07300 PX_SNX20 The phosphoinositide binding Phox Homology domain of Sorting Nexin 20 Back     alignment and domain information
>cd06864 PX_SNX4 The phosphoinositide binding Phox Homology domain of Sorting Nexin 4 Back     alignment and domain information
>cd06881 PX_SNX15_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 15-like proteins Back     alignment and domain information
>cd07279 PX_SNX20_21_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 20 and 21 Back     alignment and domain information
>cd06859 PX_SNX1_2_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2 Back     alignment and domain information
>cd06860 PX_SNX7_30_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30 Back     alignment and domain information
>cd06862 PX_SNX9_18_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 9 and 18 Back     alignment and domain information
>cd06894 PX_SNX3_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 and related proteins Back     alignment and domain information
>cd06867 PX_SNX41_42 The phosphoinositide binding Phox Homology domain of fungal Sorting Nexins 41 and 42 Back     alignment and domain information
>cd07293 PX_SNX3 The phosphoinositide binding Phox Homology domain of Sorting Nexin 3 Back     alignment and domain information
>cd06876 PX_MDM1p The phosphoinositide binding Phox Homology domain of yeast MDM1p Back     alignment and domain information
>cd06878 PX_SNX25 The phosphoinositide binding Phox Homology domain of Sorting Nexin 25 Back     alignment and domain information
>cd07286 PX_SNX18 The phosphoinositide binding Phox Homology domain of Sorting Nexin 18 Back     alignment and domain information
>cd06875 PX_IRAS The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected Back     alignment and domain information
>cd07283 PX_SNX30 The phosphoinositide binding Phox Homology domain of Sorting Nexin 30 Back     alignment and domain information
>cd06872 PX_SNX19_like_plant The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins Back     alignment and domain information
>cd06893 PX_SNX19 The phosphoinositide binding Phox Homology domain of Sorting Nexin 19 Back     alignment and domain information
>cd06880 PX_SNX22 The phosphoinositide binding Phox Homology domain of Sorting Nexin 22 Back     alignment and domain information
>cd07294 PX_SNX12 The phosphoinositide binding Phox Homology domain of Sorting Nexin 12 Back     alignment and domain information
>cd07284 PX_SNX7 The phosphoinositide binding Phox Homology domain of Sorting Nexin 7 Back     alignment and domain information
>cd06885 PX_SNX17_31 The phosphoinositide binding Phox Homology domain of Sorting Nexins 17 and 31 Back     alignment and domain information
>cd06866 PX_SNX8_Mvp1p_like The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p Back     alignment and domain information
>cd07285 PX_SNX9 The phosphoinositide binding Phox Homology domain of Sorting Nexin 9 Back     alignment and domain information
>cd07288 PX_SNX15 The phosphoinositide binding Phox Homology domain of Sorting Nexin 15 Back     alignment and domain information
>cd07277 PX_RUN The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains Back     alignment and domain information
>cd07287 PX_RPK118_like The phosphoinositide binding Phox Homology domain of RPK118-like proteins Back     alignment and domain information
>cd06871 PX_MONaKA The phosphoinositide binding Phox Homology domain of Modulator of Na,K-ATPase Back     alignment and domain information
>cd06883 PX_PI3K_C2 The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases Back     alignment and domain information
>cd06869 PX_UP2_fungi The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins Back     alignment and domain information
>cd06093 PX_domain The Phox Homology domain, a phosphoinositide binding module Back     alignment and domain information
>smart00312 PX PhoX homologous domain, present in p47phox and p40phox Back     alignment and domain information
>cd06882 PX_p40phox The phosphoinositide binding Phox Homology domain of the p40phox subunit of NADPH oxidase Back     alignment and domain information
>cd06874 PX_KIF16B_SNX23 The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23 Back     alignment and domain information
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p Back     alignment and domain information
>cd06884 PX_PI3K_C2_68D The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases similar to the Drosophila PI3K_68D protein Back     alignment and domain information
>PF00787 PX: PX domain; InterPro: IPR001683 The PX (phox) domain [] occurs in a variety of eukaryotic proteins and have been implicated in highly diverse functions such as cell signalling, vesicular trafficking, protein sorting and lipid modification [, , ] Back     alignment and domain information
>KOG2527 consensus Sorting nexin SNX11 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd07291 PX_SNX5 The phosphoinositide binding Phox Homology domain of Sorting Nexin 5 Back     alignment and domain information
>cd06892 PX_SNX5_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6 Back     alignment and domain information
>cd06895 PX_PLD The phosphoinositide binding Phox Homology domain of Phospholipase D Back     alignment and domain information
>cd07289 PX_PI3K_C2_alpha The phosphoinositide binding Phox Homology Domain of the Alpha Isoform of Class II Phosphoinositide 3-Kinases Back     alignment and domain information
>cd06890 PX_Bem1p The phosphoinositide binding Phox Homology domain of Bem1p Back     alignment and domain information
>cd07290 PX_PI3K_C2_beta The phosphoinositide binding Phox Homology Domain of the Beta Isoform of Class II Phosphoinositide 3-Kinases Back     alignment and domain information
>cd07292 PX_SNX6 The phosphoinositide binding Phox Homology domain of Sorting Nexin 6 Back     alignment and domain information
>cd06887 PX_p47phox The phosphoinositide binding Phox Homology domain of the p47phox subunit of NADPH oxidase Back     alignment and domain information
>cd06888 PX_FISH The phosphoinositide binding Phox Homology domain of Five SH protein Back     alignment and domain information
>KOG2273 consensus Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd07296 PX_PLD1 The phosphoinositide binding Phox Homology domain of Phospholipase D1 Back     alignment and domain information
>KOG2528 consensus Sorting nexin SNX9/SH3PX1 and related proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd06889 PX_NoxO1 The phosphoinositide binding Phox Homology domain of Nox Organizing protein 1 Back     alignment and domain information
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>cd06896 PX_PI3K_C2_gamma The phosphoinositide binding Phox Homology Domain of the Gamma Isoform of Class II Phosphoinositide 3-Kinases Back     alignment and domain information
>COG5391 Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] Back     alignment and domain information
>KOG3784 consensus Sorting nexin protein SNX27 [General function prediction only; Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd07297 PX_PLD2 The phosphoinositide binding Phox Homology domain of Phospholipase D2 Back     alignment and domain information
>KOG2101 consensus Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s) [Cytoskeleton; Intracellular trafficking, secretion, and vesicular transport; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd07298 PX_RICS The phosphoinositide binding Phox Homology domain of PX-RICS Back     alignment and domain information
>KOG4773 consensus NADPH oxidase [Energy production and conversion] Back     alignment and domain information
>cd07278 PX_RICS_like The phosphoinositide binding Phox Homology domain of PX-RICS-like proteins Back     alignment and domain information
>cd07299 PX_TCGAP The phosphoinositide binding Phox Homology domain of Tc10/Cdc42 GTPase-activating protein Back     alignment and domain information
>KOG1660 consensus Sorting nexin SNX6/TFAF2, contains PX domain [Defense mechanisms] Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query437
2v14_A134 Kinesin-like motor protein C20ORF23; plus-END kine 1e-20
3lui_A115 Sorting nexin-17, SNX17; PX domain, endosome, phos 3e-19
2ett_A128 Sorting nexin-22; PX domain, BC019655, SNX22_human 1e-18
1kmd_A117 VAM7P, vacuolar morphogenesis protein VAM7; PX dom 2e-17
1xte_A154 Serine/threonine-protein kinase SGK3; CISK, PX dom 1e-15
3p0c_A130 Nischarin; structural genomics, structural genomic 1e-15
2iwl_X140 Phosphatidylinositol-4-phosphate 3-kinase C2 domai 2e-13
3iq2_A138 Sorting nexin-7; SNX7, PHOX, protein signalling, S 3e-13
2ar5_A121 Phosphoinositide 3-kinase; PX domain, transferase; 4e-13
4akv_A386 Sorting nexin-33; transport protein, organelle bio 5e-13
3dyt_A366 Sorting nexin-9; 3-helix bundle, BAR domain, PX do 7e-12
2i4k_A128 Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 al 3e-11
2csk_A146 Sorting nexin 12; SNX12, PX domain, structural gen 1e-10
1ocs_A162 Sorting nexin GRD19; sorting protein, PX-domain, y 9e-10
1h6h_A143 Neutrophil cytosol factor 4; PX domain; HET: PIB; 1e-09
1kq6_A141 NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha 2e-09
2wwe_A127 Phosphoinositide-3-kinase, class 2, gamma polypept 5e-09
2l73_A149 NADPH oxidase organizer 1; cell membrane, PX domai 7e-09
2v6v_A156 BUD emergence protein 1; homotypic fusion, regulat 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2v14_A Kinesin-like motor protein C20ORF23; plus-END kinesin complex, transport protein, phosphatidylinositol 3-phosphate binding, nucleotide-binding; 2.20A {Homo sapiens} Length = 134 Back     alignment and structure
 Score = 86.4 bits (214), Expect = 1e-20
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 50  VTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKK 109
           ++IP +V+    +  D    + V++ +           V RR++ F ++   LK  + + 
Sbjct: 8   ISIPRYVL--CGQGKDAHFEFEVKITVLDETWT-----VFRRYSRFREMHKTLKLKYAEL 60

Query: 110 NIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQ 169
                PPK L   K   ++ ERR  LE+++    S +  S +  +         ++ +  
Sbjct: 61  AALEFPPKKLFGNKDERVIAERRSHLEKYLRDFFSVMLQSATSPLHINKVGLTLSKHTIC 120

Query: 170 DV 171
           + 
Sbjct: 121 EF 122
>3lui_A Sorting nexin-17, SNX17; PX domain, endosome, phosphoprotein, P transport, transport; 1.80A {Homo sapiens} PDB: 3fog_A Length = 115 Back     alignment and structure
>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens} Length = 128 Back     alignment and structure
>1kmd_A VAM7P, vacuolar morphogenesis protein VAM7; PX domain, phosphoinositide binding, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: d.189.1.1 Length = 117 Back     alignment and structure
>1xte_A Serine/threonine-protein kinase SGK3; CISK, PX domain, transferase; 1.60A {Mus musculus} SCOP: d.189.1.1 PDB: 1xtn_A Length = 154 Back     alignment and structure
>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens} Length = 130 Back     alignment and structure
>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide; PI3K, PX domain, transferase; 2.6A {Homo sapiens} Length = 140 Back     alignment and structure
>3iq2_A Sorting nexin-7; SNX7, PHOX, protein signalling, SGC, structur genomics consortium, protein transport, transport; 1.70A {Homo sapiens} Length = 138 Back     alignment and structure
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A Length = 121 Back     alignment and structure
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens} Length = 386 Back     alignment and structure
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A* Length = 366 Back     alignment and structure
>2i4k_A Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 alpha helices, proline rich loop, protein transport; NMR {Homo sapiens} Length = 128 Back     alignment and structure
>2csk_A Sorting nexin 12; SNX12, PX domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 146 Back     alignment and structure
>1ocs_A Sorting nexin GRD19; sorting protein, PX-domain, yeast protein; HET: CME; 2.03A {Saccharomyces cerevisiae} SCOP: d.189.1.1 PDB: 1ocu_A* Length = 162 Back     alignment and structure
>1h6h_A Neutrophil cytosol factor 4; PX domain; HET: PIB; 1.7A {Homo sapiens} SCOP: d.189.1.1 Length = 143 Back     alignment and structure
>1kq6_A NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha beta, PX domain, NADPH oxidase, protein binding; HET: MSE; 1.18A {Homo sapiens} SCOP: d.189.1.1 PDB: 1gd5_A 1o7k_A Length = 141 Back     alignment and structure
>2wwe_A Phosphoinositide-3-kinase, class 2, gamma polypeptide; phosphoprotein, nucleotide-binding, PIK3C2G, membrane, PX-domain, transferase, ATP-binding; 1.25A {Homo sapiens} Length = 127 Back     alignment and structure
>2l73_A NADPH oxidase organizer 1; cell membrane, PX domain, oxidoreductase regulator; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>2v6v_A BUD emergence protein 1; homotypic fusion, regulator, PI3P, 3-kinase, PX domain, SH3 domain, cytoskeleton, cell polarity; 1.5A {Saccharomyces cerevisiae} PDB: 2czo_A Length = 156 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query437
3iq2_A138 Sorting nexin-7; SNX7, PHOX, protein signalling, S 99.92
3lui_A115 Sorting nexin-17, SNX17; PX domain, endosome, phos 99.92
2csk_A146 Sorting nexin 12; SNX12, PX domain, structural gen 99.9
2i4k_A128 Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 al 99.9
1ocs_A162 Sorting nexin GRD19; sorting protein, PX-domain, y 99.9
3p0c_A130 Nischarin; structural genomics, structural genomic 99.89
1xte_A154 Serine/threonine-protein kinase SGK3; CISK, PX dom 99.89
1kmd_A117 VAM7P, vacuolar morphogenesis protein VAM7; PX dom 99.88
2v14_A134 Kinesin-like motor protein C20ORF23; plus-END kine 99.88
4az9_A129 Sorting nexin-24; protein transport; 1.75A {Homo s 99.88
1h6h_A143 Neutrophil cytosol factor 4; PX domain; HET: PIB; 99.87
2ar5_A121 Phosphoinositide 3-kinase; PX domain, transferase; 99.85
2ett_A128 Sorting nexin-22; PX domain, BC019655, SNX22_human 99.84
4akv_A386 Sorting nexin-33; transport protein, organelle bio 99.84
3hpc_X161 SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosph 99.83
3dyt_A366 Sorting nexin-9; 3-helix bundle, BAR domain, PX do 99.83
1kq6_A141 NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha 99.83
2iwl_X140 Phosphatidylinositol-4-phosphate 3-kinase C2 domai 99.82
2v6v_A156 BUD emergence protein 1; homotypic fusion, regulat 99.78
2l73_A149 NADPH oxidase organizer 1; cell membrane, PX domai 99.75
2wwe_A127 Phosphoinositide-3-kinase, class 2, gamma polypept 99.72
2dyb_A341 Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid 99.61
>3iq2_A Sorting nexin-7; SNX7, PHOX, protein signalling, SGC, structur genomics consortium, protein transport, transport; 1.70A {Homo sapiens} Back     alignment and structure
Probab=99.92  E-value=3.1e-25  Score=195.43  Aligned_cols=118  Identities=24%  Similarity=0.306  Sum_probs=97.7

Q ss_pred             EEEEeCCeEeccCCCCCCCeEEEEEEEeeecCCCCCcceEEEccchhHHHHHHHHHHHCCCCCCCCCCCCcccC----CC
Q 013768           48 YCVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLR----MK  123 (437)
Q Consensus        48 y~VsIPSw~~v~~s~~sk~yVvY~IqV~vqspeg~~~~w~V~RRYSDF~~Lh~~Lkk~fp~~~LPpLPpK~l~r----~~  123 (437)
                      +.|.|.....+.+  +.++||+|.|.|.+..+.+....|.|.||||||.+||+.|++.||...+|+||+|.+++    .+
T Consensus         9 l~i~V~dp~~~~~--g~~~yv~Y~I~v~t~~~~f~~~~~~V~RRYsdF~~L~~~L~~~~p~~~iP~lP~K~~~~~~~~~~   86 (138)
T 3iq2_A            9 LFITVDEPESHVT--TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERF   86 (138)
T ss_dssp             CEEEEEEEEEEEC--SSCEEEEEEEEEESCSSSSSCCEEEEEEEHHHHHHHHHHHHHHCTTSCCCCCCCCC----CCGGG
T ss_pred             EEEEECCCEEecC--CCCCEEEEEEEEEECCCCcCCCeEEEEcChHHHHHHHHHHHHHCcCcccCCCCcchhhccccccC
Confidence            3444555554433  46789999999977666666789999999999999999999999999999999998654    34


Q ss_pred             CHHHHHHHHHHHHHHHHHHhcccCcCCCHHHHhccCcchhhhhh
Q 013768          124 SRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSS  167 (437)
Q Consensus       124 d~efLEERR~aLE~YLq~LLs~P~L~~S~~V~eFLele~~~Rs~  167 (437)
                      +++|||+||++||.||++|+++|.|++|+.|+.||+.+...++.
T Consensus        87 ~~~fie~Rr~~Le~fL~~l~~~p~l~~s~~~~~FL~~~~~~~~~  130 (138)
T 3iq2_A           87 NDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSS  130 (138)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSTTGGGCHHHHHHHHTTCBC---
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCHhhhcChHHHhhhCCCCCCccc
Confidence            79999999999999999999999999999999999999887764
>3lui_A Sorting nexin-17, SNX17; PX domain, endosome, phosphoprotein, P transport, transport; 1.80A {Homo sapiens} PDB: 3fog_A Back     alignment and structure
>2csk_A Sorting nexin 12; SNX12, PX domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2i4k_A Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 alpha helices, proline rich loop, protein transport; NMR {Homo sapiens} Back     alignment and structure
>1ocs_A Sorting nexin GRD19; sorting protein, PX-domain, yeast protein; HET: CME; 2.03A {Saccharomyces cerevisiae} SCOP: d.189.1.1 PDB: 1ocu_A* Back     alignment and structure
>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens} Back     alignment and structure
>1xte_A Serine/threonine-protein kinase SGK3; CISK, PX domain, transferase; 1.60A {Mus musculus} SCOP: d.189.1.1 PDB: 1xtn_A Back     alignment and structure
>1kmd_A VAM7P, vacuolar morphogenesis protein VAM7; PX domain, phosphoinositide binding, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: d.189.1.1 Back     alignment and structure
>2v14_A Kinesin-like motor protein C20ORF23; plus-END kinesin complex, transport protein, phosphatidylinositol 3-phosphate binding, nucleotide-binding; 2.20A {Homo sapiens} Back     alignment and structure
>4az9_A Sorting nexin-24; protein transport; 1.75A {Homo sapiens} Back     alignment and structure
>1h6h_A Neutrophil cytosol factor 4; PX domain; HET: PIB; 1.7A {Homo sapiens} SCOP: d.189.1.1 Back     alignment and structure
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A Back     alignment and structure
>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens} Back     alignment and structure
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens} Back     alignment and structure
>3hpc_X SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosphatidylinositol, PI(4,5)P2, cell adhesion, protein transport; 1.47A {Rattus norvegicus} PDB: 3hpb_A Back     alignment and structure
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A* Back     alignment and structure
>1kq6_A NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha beta, PX domain, NADPH oxidase, protein binding; HET: MSE; 1.18A {Homo sapiens} SCOP: d.189.1.1 PDB: 1gd5_A 1o7k_A Back     alignment and structure
>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide; PI3K, PX domain, transferase; 2.6A {Homo sapiens} Back     alignment and structure
>2v6v_A BUD emergence protein 1; homotypic fusion, regulator, PI3P, 3-kinase, PX domain, SH3 domain, cytoskeleton, cell polarity; 1.5A {Saccharomyces cerevisiae} PDB: 2czo_A Back     alignment and structure
>2l73_A NADPH oxidase organizer 1; cell membrane, PX domain, oxidoreductase regulator; NMR {Homo sapiens} Back     alignment and structure
>2wwe_A Phosphoinositide-3-kinase, class 2, gamma polypeptide; phosphoprotein, nucleotide-binding, PIK3C2G, membrane, PX-domain, transferase, ATP-binding; 1.25A {Homo sapiens} Back     alignment and structure
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 437
d1xtea_116 d.189.1.1 (A:) Serine/threonine-protein kinase Sgk 4e-16
d1ocsa_132 d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast 2e-14
d1kmda_117 d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces 1e-12
d1h6ha_143 d.189.1.1 (A:) p40phox NADPH oxidase {Human (Homo 5e-11
d1kq6a_140 d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo 6e-10
>d1xtea_ d.189.1.1 (A:) Serine/threonine-protein kinase Sgk3, Cisk {Mouse (Mus musculus) [TaxId: 10090]} Length = 116 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PX domain
superfamily: PX domain
family: PX domain
domain: Serine/threonine-protein kinase Sgk3, Cisk
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.0 bits (176), Expect = 4e-16
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 50  VTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKK 109
           V+IPS               Y+V V +   E       V RR+  F KL+  LKK FP  
Sbjct: 7   VSIPSSDE--HREKKKRFTVYKVLVSVGRSEWF-----VFRRYAEFDKLYNSLKKQFPAM 59

Query: 110 NIPPAPPKGLLRMKSRALLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELE 161
            +     +          +++RR  L E++  L+   +L     V +FL+++
Sbjct: 60  ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMD 111
>d1ocsa_ d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 132 Back     information, alignment and structure
>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 117 Back     information, alignment and structure
>d1h6ha_ d.189.1.1 (A:) p40phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]} Length = 143 Back     information, alignment and structure
>d1kq6a_ d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]} Length = 140 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query437
d1xtea_116 Serine/threonine-protein kinase Sgk3, Cisk {Mouse 99.88
d1ocsa_132 Sorting nexin grd19 {Baker's yeast (Saccharomyces 99.87
d1kmda_117 Vam7p {Baker's yeast (Saccharomyces cerevisiae) [T 99.84
d1h6ha_143 p40phox NADPH oxidase {Human (Homo sapiens) [TaxId 99.8
d1kq6a_140 p47phox NADPH oxidase {Human (Homo sapiens) [TaxId 99.79
>d1xtea_ d.189.1.1 (A:) Serine/threonine-protein kinase Sgk3, Cisk {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PX domain
superfamily: PX domain
family: PX domain
domain: Serine/threonine-protein kinase Sgk3, Cisk
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=2.4e-23  Score=174.30  Aligned_cols=108  Identities=25%  Similarity=0.402  Sum_probs=95.4

Q ss_pred             EEEeCCeEeccCCCCCCCeEEEEEEEeeecCCCCCcceEEEccchhHHHHHHHHHHHCCCCCCCCCCCCcccCCCCHHHH
Q 013768           49 CVTIPSWVVLPKSRDSDPVVFYRVQVGLQSPEGITTTRGVLRRFNNFLKLFTDLKKAFPKKNIPPAPPKGLLRMKSRALL  128 (437)
Q Consensus        49 ~VsIPSw~~v~~s~~sk~yVvY~IqV~vqspeg~~~~w~V~RRYSDF~~Lh~~Lkk~fp~~~LPpLPpK~l~r~~d~efL  128 (437)
                      .|.||++....+  ..++|++|.|.|...     ...|.|.||||||.+||+.|++.||...+|++|+|.+++..+++++
T Consensus         6 ~i~I~~~~~~~~--~~k~~~~Y~I~v~~~-----~~~~~V~rRYsdF~~L~~~L~~~~~~~~~p~~~~~~~~~~~~~~~l   78 (116)
T d1xtea_           6 SVSIPSSDEHRE--KKKRFTVYKVLVSVG-----RSEWFVFRRYAEFDKLYNSLKKQFPAMALKIPAKRIFGDNFDPDFI   78 (116)
T ss_dssp             EEEEEEEEEEEE--TTEEEEEEEEEEEET-----TEEEEEEEEHHHHHHHHHHHHHHCGGGCCCCCCSCCSSCTTCHHHH
T ss_pred             cEEeCCceEecc--CCCCEEEEEEEEEEC-----CcEEEEEeeHHHHHHHHHHHHHHCCCCCCCCCCcccccCccCHHHH
Confidence            488998886544  466899999999643     3699999999999999999999999888887777777777889999


Q ss_pred             HHHHHHHHHHHHHHhcccCcCCCHHHHhccCcchh
Q 013768          129 EERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAA  163 (437)
Q Consensus       129 EERR~aLE~YLq~LLs~P~L~~S~~V~eFLele~~  163 (437)
                      ++||.+||.||+.|+++|.+++++.|++||+++..
T Consensus        79 ~~Rr~~L~~yL~~l~~~~~l~~~~~~~~FL~~d~~  113 (116)
T d1xtea_          79 KQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSP  113 (116)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHTSHHHHHHTTTTCG
T ss_pred             HHHHHHHHHHHHHHHhCHhhhcChHHHhhcCCCCC
Confidence            99999999999999999999999999999999865
>d1ocsa_ d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h6ha_ d.189.1.1 (A:) p40phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kq6a_ d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure