Citrus Sinensis ID: 013811
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 436 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FJZ3 | 431 | Mannan endo-1,4-beta-mann | yes | no | 0.979 | 0.990 | 0.692 | 1e-172 | |
| Q0JKM9 | 432 | Mannan endo-1,4-beta-mann | yes | no | 0.873 | 0.881 | 0.682 | 1e-159 | |
| Q6YM50 | 414 | Mannan endo-1,4-beta-mann | N/A | no | 0.910 | 0.958 | 0.562 | 1e-134 | |
| Q9FZ03 | 414 | Mannan endo-1,4-beta-mann | N/A | no | 0.910 | 0.958 | 0.562 | 1e-134 | |
| Q6Z310 | 407 | Putative mannan endo-1,4- | no | no | 0.832 | 0.891 | 0.591 | 1e-133 | |
| Q9SG94 | 414 | Mannan endo-1,4-beta-mann | no | no | 0.908 | 0.956 | 0.527 | 1e-133 | |
| Q8L5J1 | 399 | Mannan endo-1,4-beta-mann | N/A | no | 0.848 | 0.927 | 0.576 | 1e-129 | |
| Q9SG95 | 408 | Putative mannan endo-1,4- | no | no | 0.899 | 0.960 | 0.534 | 1e-126 | |
| O48540 | 397 | Mannan endo-1,4-beta-mann | N/A | no | 0.869 | 0.954 | 0.540 | 1e-126 | |
| Q9LW44 | 408 | Putative mannan endo-1,4- | no | no | 0.899 | 0.960 | 0.518 | 1e-121 |
| >sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/432 (69%), Positives = 350/432 (81%), Gaps = 5/432 (1%)
Query: 6 LAFAIFLAFFIHRQSFNV-LHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
LA FLA I + + GF+RT+G F LNG Y+ANGFNAYWLMYVASDP
Sbjct: 4 LALFPFLAIVIQLSCWELGTDALPSGGFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDP 63
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
SQRSK+STAF +A+ HGLTVARTWAFSDGGYR LQ SPGSYNE MF+GLDF +AEAR++G
Sbjct: 64 SQRSKISTAFQDASRHGLTVARTWAFSDGGYRALQYSPGSYNEDMFQGLDFALAEARRHG 123
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IK+ILS ANNY+SFGG+KQYV+WARS+G+ ++S+DDFF + +VK +YKN IK VLNR+NT
Sbjct: 124 IKIILSFANNYESFGGRKQYVDWARSRGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNT 183
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FT +HYKDDPTIMAWELMNEPRC SDPSGR IQAWITEMA++VKS+DRNHLLEAGLEGFY
Sbjct: 184 FTKVHYKDDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFY 243
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304
GQS+PQ K +NP GTDF+ANN IPGIDF TVHSYPD+W S+++ Q+ FLN WLD
Sbjct: 244 GQSSPQSKTLNPPGQFGTDFIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDA 303
Query: 305 HIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364
HIQDA+++L KPI+LAEFGKS K PGY+ QRD++FNTVY KIY SAKRGGAAAGGLFWQ
Sbjct: 304 HIQDAQNVLHKPIILAEFGKSMKKPGYTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQ 363
Query: 365 LLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQ 424
LL G+D F+DGY I+LSQS ST NVI+QQ+ KL IRKIFARM NVE+ KR+RG Q
Sbjct: 364 LLVNGIDNFQDGYGIILSQSSSTVNVISQQSRKLTLIRKIFARMINVEKWKRARG----Q 419
Query: 425 RQGGNRGRHIGN 436
Q G RG I N
Sbjct: 420 GQVGKRGHKINN 431
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 7EC: 8 |
| >sp|Q0JKM9|MAN1_ORYSJ Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/384 (68%), Positives = 314/384 (81%), Gaps = 3/384 (0%)
Query: 32 FIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFS 91
F+R +G+ F+L+GN Y+ANGFNAYWLM +A+DPSQR KVS A EAA HGLTVARTWAFS
Sbjct: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
Query: 92 DGGY-RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
DGG LQ SPG+YNE FKGLDFV++EARKYGIK+ILSL +NYDSFGG+KQYVNWAR+
Sbjct: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
Query: 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD 210
QGQ + SDD+FF NPVVKG+YKN +KTVL R NT TG+ Y+DDPTI+AWELMNEPRC SD
Sbjct: 157 QGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSD 216
Query: 211 PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQR-KRVNPN-LDIGTDFVANN 268
SGRT+Q+WITEMA++VKSIDRNH+LE GLEGFYG S+P R VNP+ +GTDF+ANN
Sbjct: 217 LSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANN 276
Query: 269 LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD 328
+PGIDFATVHSYPDQWLS +D+ QL F+ WLD HI DA+ +LRKP+L+AEFGKS KD
Sbjct: 277 QVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADAQAVLRKPLLIAEFGKSWKD 336
Query: 329 PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTA 388
PGYS+ QRD ++ TVY KIY SA+RGGA GGLFWQLL GMD++RDGYE+V ++PST
Sbjct: 337 PGYSSGQRDALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTT 396
Query: 389 NVITQQAHKLYQIRKIFARMRNVE 412
VIT + +L + K FAR R +
Sbjct: 397 GVITTNSRRLRFLSKAFARARQAQ 420
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Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q6YM50|MAN5_SOLLC Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/400 (56%), Positives = 290/400 (72%), Gaps = 3/400 (0%)
Query: 2 RRLHLAFAIFLAFFIHRQSFNVLHVE--AGD-GFIRTRGSHFLLNGNLYFANGFNAYWLM 58
R + F +FL VL E A D GF+R G+HF LNG+ + NGFN+YWLM
Sbjct: 6 RLISCIFVLFLLSLAFACEARVLLDENNANDQGFVRVNGAHFELNGSPFLFNGFNSYWLM 65
Query: 59 YVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIA 118
+VA++PS+R KVS EA+S GL+V RTWAFSDGG R LQ SPG Y+E++F+GLDFVI+
Sbjct: 66 HVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVIS 125
Query: 119 EARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTV 178
EA+KYGI+LILS NNY+ FGGK QYV WAR+ G + DDDF+ N + K YYKN IK V
Sbjct: 126 EAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKV 185
Query: 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEA 238
+ R+NT TG+ YKDD TIMAWELMNEPR +D SG T+ AW+ EMAS+VKS+D HLLE
Sbjct: 186 VTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEI 245
Query: 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
G+EGFYG S P+RK +NP +GTDF++N+LI IDFAT+H+Y DQWLS +D Q+ F+
Sbjct: 246 GMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFM 305
Query: 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358
W+ +H QDA++IL+KP++LAEFGKS +DPGY+ RD +T+Y IYS AK GG
Sbjct: 306 QKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMG 365
Query: 359 GGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 398
G L WQL+ +GM+ + DGY I L ++PSTA +IT Q+H +
Sbjct: 366 GSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAM 405
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May be involved in weakening of anther wall during pollen development. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9FZ03|MAN2_SOLLC Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/400 (56%), Positives = 290/400 (72%), Gaps = 3/400 (0%)
Query: 2 RRLHLAFAIFLAFFIHRQSFNVLHVE--AGD-GFIRTRGSHFLLNGNLYFANGFNAYWLM 58
R + F +FL VL E A D GF+R G+HF LNG+ + NGFN+YWLM
Sbjct: 6 RLISCIFVLFLLSLAFACEARVLLDENNANDQGFVRVNGAHFELNGSPFLFNGFNSYWLM 65
Query: 59 YVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIA 118
+VA++PS+R KVS EA+S GL+V RTWAFSDGG R LQ SPG Y+E++F+GLDFVI+
Sbjct: 66 HVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVIS 125
Query: 119 EARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTV 178
EA+KYGI+LILS NNY+ FGGK QYV WAR+ G + DDDF+ N + K YYKN IK V
Sbjct: 126 EAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKV 185
Query: 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEA 238
+ R+NT TG+ YKDD TIMAWELMNEPR +D SG T+ AW+ EMAS+VKS+D HLLE
Sbjct: 186 VTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEI 245
Query: 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
G+EGFYG S P+RK +NP +GTDF++N+LI IDFAT+H+Y DQWLS +D Q+ F+
Sbjct: 246 GMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFM 305
Query: 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358
W+ +H QDA++IL+KP++LAEFGKS +DPGY+ RD +T+Y IYS AK GG
Sbjct: 306 QKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMG 365
Query: 359 GGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 398
G L WQL+ +GM+ + DGY I L ++PSTA +IT Q+H +
Sbjct: 366 GSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAM 405
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Possesses endo-beta-mannanase activity in vitro. May be involved in seed germination by weakening the endosperm cap prior to radicle emergence. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q6Z310|MAN9_ORYSJ Putative mannan endo-1,4-beta-mannosidase 9 OS=Oryza sativa subsp. japonica GN=MAN9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/367 (59%), Positives = 275/367 (74%), Gaps = 4/367 (1%)
Query: 32 FIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFS 91
F R G+ F + G +++NGFNAYWLMY+ASDP RSK + +AAS T+ RTWAFS
Sbjct: 39 FARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFS 98
Query: 92 DGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151
DGGYRPLQ+SPG YNE MF GLDFVIAEA+K G+ LILSL NN+D FGGKKQYV WAR Q
Sbjct: 99 DGGYRPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQ 158
Query: 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP 211
G L SDDDFFR+ V K +YKN VL R N TG+ YKDDPTI AWEL+NEPRC SD
Sbjct: 159 GHNLGSDDDFFRSDVTKQFYKN--HAVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDL 216
Query: 212 SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP 271
SG+T+QAW+TEMA YVKS+D NH++E GLEGFYG+S K NP +GTDF+ANNL+P
Sbjct: 217 SGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGES--MHKNFNPGYTVGTDFIANNLVP 274
Query: 272 GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGY 331
+DFAT+HSYPDQW+S ++ +Q++F+ W+ HI+D+ +LRKP+L+ EFG S + GY
Sbjct: 275 AVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGY 334
Query: 332 STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVI 391
+ RD F TVY +Y+SA+ GGA AGGLFWQ++ GM+++ DGYE+VL +S STA+V+
Sbjct: 335 TVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTADVV 394
Query: 392 TQQAHKL 398
Q ++
Sbjct: 395 AHQCARI 401
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Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9SG94|MAN3_ARATH Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 212/402 (52%), Positives = 297/402 (73%), Gaps = 6/402 (1%)
Query: 6 LAFAIFLAFFIHRQSFNV-LHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
L F + LA I + S ++ + + DGF+ +G F+LNG ++ANGFNAYWL Y A+D
Sbjct: 4 LCFVVLLAILIAQNSSDLGVKSASSDGFVSRKGVQFILNGKPFYANGFNAYWLAYEATDS 63
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
+ R K++ F A H LT+ RTW F DGGYR LQ +PG Y+E+ F+GLDF IAEA++ G
Sbjct: 64 TTRFKITYVFQNATIHDLTIVRTWGFRDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLG 123
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IK+I++ NNY FGG+KQYV+WA++ GQ ++SDDDF+ NP+VK YYKN +KT++NR NT
Sbjct: 124 IKMIITFVNNYSDFGGRKQYVDWAKNTGQNVSSDDDFYTNPLVKQYYKNHVKTMVNRVNT 183
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FT + YKD+PTIM WELMNEP+C +DPSG+T+ AW+ EMA YVKS+D HLL GLEGFY
Sbjct: 184 FTKVEYKDEPTIMGWELMNEPQCRADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFY 243
Query: 245 GQSTPQRK-RVNP---NLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNN 300
G S+PQRK +NP N+ +GTDF+AN+ + IDFA++HSYPD W + +++ +L+ L
Sbjct: 244 GDSSPQRKTSLNPVAANV-LGTDFIANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRK 302
Query: 301 WLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGG 360
WL+ H++DA++IL+KP++L EFGK PGY+ QRD +FN + IY SA++GG AAG
Sbjct: 303 WLECHLEDAQNILKKPLILGEFGKPTNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGA 362
Query: 361 LFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIR 402
LFW ++++GM+ F+D IVLS++ +T N+IT+++ KL IR
Sbjct: 363 LFWHVISDGMNNFKDPLSIVLSENSTTVNIITEESRKLGLIR 404
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q8L5J1|MAN4_SOLLC Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 278/375 (74%), Gaps = 5/375 (1%)
Query: 28 AGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVART 87
+ + F+ T G+HF LNG + NGFNAYWLMY+A DPS R KV+ F +A+ + + VART
Sbjct: 28 SNNNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVART 87
Query: 88 WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNW 147
WAFS GG RPLQ +PG YNEQMF+GLDFVI+EA+KYGI LI+SL NN+D+FGGKKQYV W
Sbjct: 88 WAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEW 147
Query: 148 ARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207
A +GQ LTSDDDFF NP+VKG+YKN +K VL R NT T + YKDDPTI++WEL+NEPRC
Sbjct: 148 AVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRC 207
Query: 208 TSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDI-GTDFVA 266
SD SG+T Q W+ EMA Y+KSID NHLLE GLEGFYG ++ NPN I GT+F++
Sbjct: 208 PSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDM---RQYNPNSYIFGTNFIS 264
Query: 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR 326
NN + GIDF T+H YP+QWL Q + + W+ HI D++ +L+KP+L+AEFGKS
Sbjct: 265 NNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSK-MLKKPLLIAEFGKST 323
Query: 327 KDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPS 386
K PGY+ +RD F +Y I++ AK GG GGLFWQ+L +GM +F DGY++VL +SPS
Sbjct: 324 KTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPS 383
Query: 387 TANVITQQAHKLYQI 401
T+ VI Q+ +L ++
Sbjct: 384 TSRVILLQSLRLSKL 398
|
Possesses endo-beta-mannanase and mannan transglycosylase activities. May be involved in cell wall degradation during fruit ripening. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9SG95|MAN4_ARATH Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/397 (53%), Positives = 283/397 (71%), Gaps = 5/397 (1%)
Query: 6 LAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPS 65
L F + LA I QS+ + DGF+ G F+LNG ++ANGFNAYWL Y A+DP+
Sbjct: 4 LCFIVLLAIVI-AQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPT 62
Query: 66 QRSKVSTAFHEAASHGLTVARTWAFSDGG-YRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
R K++ F A S GLT+ARTW F DG YR LQ +PGSY+EQ F+GLDFVIAEA++ G
Sbjct: 63 TRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIG 122
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IKLI+ L NN+D +GGKKQYV+WARS+G+ ++S+DDF+RNPV+K +YKN +KTVLNR NT
Sbjct: 123 IKLIILLVNNWDDYGGKKQYVDWARSKGEVVSSNDDFYRNPVIKDFYKNHVKTVLNRVNT 182
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FT + YKD+P IMAW+LMNEPRC D SG+T+ WI EMA +VKS+D NHLL G EGFY
Sbjct: 183 FTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGFY 242
Query: 245 GQSTPQRKR-VNPNL--DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNW 301
G S+P+RK +NP +G DF+AN+ I IDFA++H D W + +L+F+ W
Sbjct: 243 GDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRW 302
Query: 302 LDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGL 361
L+ HI+DA++IL+KP++LAEFG P Y+ RD +F T Y IY+SA++GG+AAG L
Sbjct: 303 LEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAGAL 362
Query: 362 FWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 398
FW++++EGM F I+LS ST N+I++ A K+
Sbjct: 363 FWEVISEGMSNFAGPSSIILSDKSSTVNIISEHARKM 399
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|O48540|MAN1_SOLLC Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 207/383 (54%), Positives = 280/383 (73%), Gaps = 4/383 (1%)
Query: 21 FNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASH 80
F L EA GFI + SHF LNG+ + NGFN+YWLM+VA+DP++R KV+ +A+
Sbjct: 16 FLALVCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPTERYKVTEVLKDASVA 75
Query: 81 GLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGG 140
GL+V RTWAFSDGG R LQ SPG Y+E++F+GLDFVIAEA+KYGI+LILS N ++ FGG
Sbjct: 76 GLSVCRTWAFSDGGDRALQISPGIYDERVFQGLDFVIAEAKKYGIRLILSFVNQWNDFGG 135
Query: 141 KKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE 200
K QYV WAR+ G +++DD+F+ +P++K Y KN I+ V+ R N+ T + YKDDPTIMAWE
Sbjct: 136 KAQYVWWARNAGAQISNDDEFYTHPMLKKYLKNHIEKVVTRLNSITKVAYKDDPTIMAWE 195
Query: 201 LMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDI 260
LMNEPR +D SG+T+ W+ EMAS+VKS+D HLLE G+EGFYG S P+RK VNP +
Sbjct: 196 LMNEPRDQADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKSVNPGYQV 255
Query: 261 GTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLA 320
GTDF++N+LI IDFAT+H+Y DQW+S +D QL ++ W+ +H +DA +IL+KP++LA
Sbjct: 256 GTDFISNHLINEIDFATIHAYTDQWVSGQSDDAQLVWMEKWITSHWEDARNILKKPLVLA 315
Query: 321 EFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIV 380
EFGKS + G RD+ ++VY +Y+ AK GG AG L WQL+ GM+ + DGY IV
Sbjct: 316 EFGKSSRGQG----SRDIFMSSVYRNVYNLAKEGGTMAGSLVWQLMAHGMENYDDGYCIV 371
Query: 381 LSQSPSTANVITQQAHKLYQIRK 403
L Q+PST +I+ QAH + + +
Sbjct: 372 LGQTPSTTQIISDQAHVMTALAR 394
|
Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9LW44|MANP_ARATH Putative mannan endo-1,4-beta-mannosidase P OS=Arabidopsis thaliana GN=MANP PE=5 SV=3 | Back alignment and function description |
|---|
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/397 (51%), Positives = 279/397 (70%), Gaps = 5/397 (1%)
Query: 6 LAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPS 65
L F + LA I QS+ + DGF+ G F+LNG ++ANGFNAYWL Y A+DP+
Sbjct: 4 LCFIVLLAIVIA-QSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPA 62
Query: 66 QRSKVSTAFHEAASHGLTVARTWAFSDGG-YRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
R K++ F A S GLT+ARTW F +G YR LQ +PGSY+EQ F+GLDF IAEA++ G
Sbjct: 63 TRFKITNVFQNATSLGLTIARTWGFRNGAIYRALQTAPGSYDEQTFQGLDFGIAEAKRVG 122
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IKLI+ L NN+D +GGKKQYV+WARS+G+ ++S+DDF+RNPV+K +YKN +KT+LNR NT
Sbjct: 123 IKLIIPLVNNWDDYGGKKQYVDWARSKGEMVSSNDDFYRNPVIKEFYKNHVKTMLNRVNT 182
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FT + YKD+P MAW+LMNEPRC D SG+T+ AWI EMA +VKS+D NHLL G EGFY
Sbjct: 183 FTKVAYKDEPASMAWQLMNEPRCGVDRSGKTLMAWINEMALFVKSVDPNHLLSTGHEGFY 242
Query: 245 GQSTPQRKR-VNPNL--DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNW 301
G S+P+RK +NP +G DF+AN+ I IDFA++H D W + +L+F+ W
Sbjct: 243 GDSSPERKNSLNPVSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRW 302
Query: 302 LDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGL 361
L+ HI+DA++ L+KP++LAEFG P Y+ RD +F T Y IY S ++GG+AAG L
Sbjct: 303 LEGHIEDAQNNLKKPVILAEFGLGSDTPRYTLANRDDVFTTTYDIIYISTQKGGSAAGAL 362
Query: 362 FWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 398
FW++++EG+ F I+LS ST N+I++Q K+
Sbjct: 363 FWEVISEGVSNFAGPSSIILSDKSSTVNIISEQRRKM 399
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 436 | ||||||
| 225007940 | 433 | endo-beta-mannanase [Actinidia arguta] | 0.988 | 0.995 | 0.805 | 0.0 | |
| 157313310 | 433 | endo-1,4-beta-mannosidase protein 2 [Pru | 0.961 | 0.967 | 0.811 | 0.0 | |
| 225458217 | 433 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.983 | 0.990 | 0.751 | 0.0 | |
| 164470392 | 433 | mannase [Prunus salicina] | 0.961 | 0.967 | 0.795 | 0.0 | |
| 224133806 | 435 | predicted protein [Populus trichocarpa] | 0.963 | 0.965 | 0.829 | 0.0 | |
| 357483557 | 438 | Mannan endo-1,4-beta-mannosidase [Medica | 0.988 | 0.984 | 0.762 | 0.0 | |
| 225430698 | 433 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.947 | 0.953 | 0.794 | 0.0 | |
| 449451545 | 418 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.922 | 0.961 | 0.799 | 0.0 | |
| 356496721 | 431 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.983 | 0.995 | 0.740 | 0.0 | |
| 255637304 | 431 | unknown [Glycine max] | 0.983 | 0.995 | 0.738 | 0.0 |
| >gi|225007940|gb|ACN78662.1| endo-beta-mannanase [Actinidia arguta] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/432 (80%), Positives = 390/432 (90%), Gaps = 1/432 (0%)
Query: 5 HLAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
H A +FLA I +QS +V VEAGD FIRTRG+HF+LNG+ Y+ANGFNAYWLMY A+DP
Sbjct: 3 HWALTLFLALLIGQQSHHV-QVEAGDDFIRTRGTHFMLNGSPYYANGFNAYWLMYFATDP 61
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
SQR KVS AF EA++HGL+VARTWAFSDGGYRPLQ SPG YNEQ FKGLDFV+AEAR+YG
Sbjct: 62 SQRGKVSAAFREASNHGLSVARTWAFSDGGYRPLQFSPGYYNEQAFKGLDFVVAEARRYG 121
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IKL+LSL NNY+SFGGKKQYVNWARSQGQ+L+SDDDFFRNP+VKGYYKN +KTVLNRYNT
Sbjct: 122 IKLVLSLVNNYESFGGKKQYVNWARSQGQYLSSDDDFFRNPLVKGYYKNHVKTVLNRYNT 181
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
TG+ YK+DPTIMAWELMNEPRCTSDPSGRTIQAWI EMASYVKSIDRNHLLEAGLEGFY
Sbjct: 182 MTGVIYKNDPTIMAWELMNEPRCTSDPSGRTIQAWIMEMASYVKSIDRNHLLEAGLEGFY 241
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304
GQ+TPQRK +NP +IGTDF+ANN +P IDFATVHSYPDQWL+SSN+++QLSFLNNWLDT
Sbjct: 242 GQTTPQRKSLNPGFNIGTDFIANNRVPWIDFATVHSYPDQWLTSSNEQNQLSFLNNWLDT 301
Query: 305 HIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364
HIQDA+ +LRKP+LL EFGKS KDPGYSTYQRD++FNTVYYKIYSSAKRGGAAAGGLFWQ
Sbjct: 302 HIQDAQFVLRKPLLLTEFGKSWKDPGYSTYQRDLLFNTVYYKIYSSAKRGGAAAGGLFWQ 361
Query: 365 LLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQ 424
LLTEGMD+FRDGY+IVLS+SPSTANVI QQ+H+LYQIRKIFARMRNVER KR+R RR
Sbjct: 362 LLTEGMDSFRDGYDIVLSESPSTANVIAQQSHRLYQIRKIFARMRNVERWKRARWARRNP 421
Query: 425 RQGGNRGRHIGN 436
NRG+ IGN
Sbjct: 422 WFSRNRGKPIGN 433
|
Source: Actinidia arguta Species: Actinidia arguta Genus: Actinidia Family: Actinidiaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157313310|gb|ABV32548.1| endo-1,4-beta-mannosidase protein 2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/420 (81%), Positives = 383/420 (91%), Gaps = 1/420 (0%)
Query: 17 HRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHE 76
H+Q F + HVEAGDGFIRTRG HFLLNG+ Y+ANGFN YWLMYVASDPSQR KVS+ F E
Sbjct: 15 HQQGFPI-HVEAGDGFIRTRGVHFLLNGSPYYANGFNGYWLMYVASDPSQRYKVSSVFRE 73
Query: 77 AASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136
A SHGLTVARTWAFSDGGYRPLQ SPGSYNEQMFKGLDFVIAEAR+YGIKLILSL NNY+
Sbjct: 74 ATSHGLTVARTWAFSDGGYRPLQYSPGSYNEQMFKGLDFVIAEARRYGIKLILSLVNNYE 133
Query: 137 SFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196
SFGG+KQYVNWARSQGQ+LTSDDDF+RNPVVKGYYKN + TVLNRYN++T +HYKDDPTI
Sbjct: 134 SFGGRKQYVNWARSQGQYLTSDDDFYRNPVVKGYYKNHVTTVLNRYNSYTRVHYKDDPTI 193
Query: 197 MAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNP 256
MAWEL+NEPRCTSDPSGRT+QAWI EMAS+VKSIDRNHLLEAGLEGFYGQ+ PQR R+NP
Sbjct: 194 MAWELINEPRCTSDPSGRTVQAWIMEMASHVKSIDRNHLLEAGLEGFYGQAIPQRMRLNP 253
Query: 257 NLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKP 316
+IGTDF+ANN IPGIDFATVHSYPDQWLSSSND++QLSFLNNWLDTHIQDA++ILRKP
Sbjct: 254 GFNIGTDFIANNRIPGIDFATVHSYPDQWLSSSNDQNQLSFLNNWLDTHIQDAQYILRKP 313
Query: 317 ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376
+ + EFGKS KDPG++TYQRD++FNTVY KIYSSA+RGGAAAGGLFWQLLTEGMD+F DG
Sbjct: 314 VFITEFGKSWKDPGFNTYQRDLLFNTVYSKIYSSARRGGAAAGGLFWQLLTEGMDSFGDG 373
Query: 377 YEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQRQGGNRGRHIGN 436
Y+IVLSQSPSTANVI QQ+HKLYQIRKIFAR+RN + KR+R +RR + N+G+ IGN
Sbjct: 374 YDIVLSQSPSTANVIAQQSHKLYQIRKIFARIRNAQMWKRARAIRRAEWLARNKGKRIGN 433
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458217|ref|XP_002281804.1| PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Vitis vinifera] gi|302142526|emb|CBI19729.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/430 (75%), Positives = 374/430 (86%), Gaps = 1/430 (0%)
Query: 7 AFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQ 66
A A+ + FI +Q N L VEA DGF++T G HF+LNG Y ANGFNAYWLMYVASDPSQ
Sbjct: 5 ALALLVLVFIQKQG-NFLQVEAADGFVKTSGMHFVLNGLPYHANGFNAYWLMYVASDPSQ 63
Query: 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIK 126
RSK+S+AF EAA HGLT+ARTWAFSDGGYRPLQ SPGSYNEQMF+GLDFV++EA KYGIK
Sbjct: 64 RSKISSAFAEAAGHGLTIARTWAFSDGGYRPLQYSPGSYNEQMFQGLDFVVSEAGKYGIK 123
Query: 127 LILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186
L+LSLANNY+SFGGKKQYV+WAR QGQ+LTSDDDFFRN V KGYYKN IKTVL R N+ T
Sbjct: 124 LVLSLANNYESFGGKKQYVDWARGQGQYLTSDDDFFRNSVAKGYYKNHIKTVLTRRNSIT 183
Query: 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQ 246
G+ YKD+PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKS+D NHLLEAGLEGFYGQ
Sbjct: 184 GVVYKDEPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSVDGNHLLEAGLEGFYGQ 243
Query: 247 STPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHI 306
++PQ+++ NPN +GTDF+ANN IPGIDFATVHSYPDQW SSS+D QLSFLN WL HI
Sbjct: 244 TSPQKQQYNPNFQVGTDFIANNQIPGIDFATVHSYPDQWFSSSSDDTQLSFLNEWLKNHI 303
Query: 307 QDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLL 366
QDA+++LRKP+L EFGKS KD GYSTYQRD++FNTVY IYSSA+ GGAA GG+FWQLL
Sbjct: 304 QDAQNVLRKPLLFTEFGKSSKDSGYSTYQRDMLFNTVYSAIYSSARSGGAAVGGMFWQLL 363
Query: 367 TEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQRQ 426
TEGMD+FRDGYEIVLS+SPSTANVI QQ+HKLY +RK++AR+RN+++ KR+R +RR Q
Sbjct: 364 TEGMDSFRDGYEIVLSESPSTANVIAQQSHKLYLLRKMYARLRNIQKWKRARAIRRAQWW 423
Query: 427 GGNRGRHIGN 436
N+G++ GN
Sbjct: 424 NRNKGKNTGN 433
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|164470392|gb|ABY58035.1| mannase [Prunus salicina] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/420 (79%), Positives = 379/420 (90%), Gaps = 1/420 (0%)
Query: 17 HRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHE 76
H+Q + HVEAGDGFIRTRG HFLLNG+ Y+ANGFN YWLMYVASDPSQR KVS+ F E
Sbjct: 15 HQQGLPI-HVEAGDGFIRTRGVHFLLNGSPYYANGFNGYWLMYVASDPSQRYKVSSVFRE 73
Query: 77 AASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136
A SHGLTVARTWAFSDGGYRPLQ SPGSYNEQ+FKGLDFVIAEAR+YGIKLILSL NNY+
Sbjct: 74 ATSHGLTVARTWAFSDGGYRPLQYSPGSYNEQLFKGLDFVIAEARRYGIKLILSLVNNYE 133
Query: 137 SFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196
SFGG+KQYVNW RS+GQ+LTSDDDF+RNPVVKGYYKN + TVLNRYN++T +HYKDDPTI
Sbjct: 134 SFGGRKQYVNWTRSRGQYLTSDDDFYRNPVVKGYYKNHVTTVLNRYNSYTRVHYKDDPTI 193
Query: 197 MAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNP 256
MAWEL+NEPRCTSDPSGRT+QAWI EMAS+VKSIDRNHLLEAGLEGFYGQ+ PQR R+NP
Sbjct: 194 MAWELINEPRCTSDPSGRTVQAWIMEMASHVKSIDRNHLLEAGLEGFYGQAIPQRMRLNP 253
Query: 257 NLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKP 316
+IGTDF+ANN IPGIDFATVHSYPDQWLSSSND++QLSF+NNWL+THIQDA++ILRKP
Sbjct: 254 GFNIGTDFIANNRIPGIDFATVHSYPDQWLSSSNDQNQLSFMNNWLNTHIQDAQYILRKP 313
Query: 317 ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376
+ + EFGKS KDPG++TYQRD+ FNTVY KIYSSA+RGGAAAG LFWQLLTEGMD+F DG
Sbjct: 314 VFITEFGKSWKDPGFNTYQRDLFFNTVYSKIYSSARRGGAAAGALFWQLLTEGMDSFGDG 373
Query: 377 YEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQRQGGNRGRHIGN 436
Y+IVLSQSPSTANVI QQ+HKLYQIRKIFAR+RN + KR+R +RR + N+G+ IGN
Sbjct: 374 YDIVLSQSPSTANVIAQQSHKLYQIRKIFARIRNAQMWKRARAIRRAEWLARNKGKRIGN 433
|
Source: Prunus salicina Species: Prunus salicina Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133806|ref|XP_002327685.1| predicted protein [Populus trichocarpa] gi|118487673|gb|ABK95661.1| unknown [Populus trichocarpa] gi|222836770|gb|EEE75163.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/423 (82%), Positives = 378/423 (89%), Gaps = 3/423 (0%)
Query: 16 IHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFH 75
IH+ F+ HVEAGDGFIRTRG HFLLNG+ Y+ANGFNAYWLMY ASDPSQR KVS AF
Sbjct: 14 IHQGCFH-FHVEAGDGFIRTRGVHFLLNGSPYYANGFNAYWLMYTASDPSQRPKVSAAFR 72
Query: 76 EAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNY 135
EAASHGLTVARTWAFSDGGYRPLQ SPGSYNEQMFKGLDFV+AEAR YGIKLILS ANNY
Sbjct: 73 EAASHGLTVARTWAFSDGGYRPLQYSPGSYNEQMFKGLDFVVAEARSYGIKLILSFANNY 132
Query: 136 DSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT 195
DSFGGKKQYVNWARS+GQ+L+SDDDFFR+PVVKGYYKN IKTVL RYN+FTGI +KDDPT
Sbjct: 133 DSFGGKKQYVNWARSRGQYLSSDDDFFRHPVVKGYYKNHIKTVLYRYNSFTGIRFKDDPT 192
Query: 196 IMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVN 255
IMAWELMNEPRCTSDPSGRTIQAWI EMAS+VKSIDRNHLLEAGLEGFYG STPQR +N
Sbjct: 193 IMAWELMNEPRCTSDPSGRTIQAWIAEMASFVKSIDRNHLLEAGLEGFYGPSTPQRNSLN 252
Query: 256 PNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRK 315
L IGTDF+ANN IP IDFATVH+YPDQWLSSSND++QLSFLNNWLDTHIQDA++ LRK
Sbjct: 253 LGLKIGTDFIANNRIPEIDFATVHAYPDQWLSSSNDQNQLSFLNNWLDTHIQDAQNSLRK 312
Query: 316 PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRD 375
PIL+AEFGKS K PG+STYQRD++FNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD F D
Sbjct: 313 PILIAEFGKSWKYPGFSTYQRDLLFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDNFHD 372
Query: 376 GYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRR--QRQGGNRGRH 433
GYEI+L Q STANVI QQAHKLYQIRKIF RMRNVER KR+R R R +GGN G+
Sbjct: 373 GYEIMLGQPSSTANVIAQQAHKLYQIRKIFLRMRNVERWKRARAARARRVHWRGGNGGKR 432
Query: 434 IGN 436
IGN
Sbjct: 433 IGN 435
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357483557|ref|XP_003612065.1| Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|355513400|gb|AES95023.1| Mannan endo-1,4-beta-mannosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/434 (76%), Positives = 370/434 (85%), Gaps = 3/434 (0%)
Query: 5 HLAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
H A+ LA +H++ FN+ AGDGF+RTRG HF+LNGN Y+ANGFNAYWLMY ASDP
Sbjct: 4 HFAWLFLLAILVHQECFNINVEAAGDGFVRTRGIHFMLNGNPYYANGFNAYWLMYTASDP 63
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
SQR KVS AF EA SHGLTVARTWAFSDGGY PLQ SPG YNEQMFKGLDFVI+EARK+G
Sbjct: 64 SQRFKVSNAFREATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVISEARKHG 123
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYN 183
IKLILSL NNY+SFGGKKQYVNWARS GQ+LTSDDDFFRNPVVKG+Y N +KTVLNRYN
Sbjct: 124 IKLILSLVNNYESFGGKKQYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYN 183
Query: 184 TFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGF 243
+FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQ WITEMAS VKSIDRNHLLEAGLEGF
Sbjct: 184 SFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQGWITEMASLVKSIDRNHLLEAGLEGF 243
Query: 244 YGQSTPQRKRVNPNLD-IGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWL 302
YGQSTPQR + NP ++ IGTDF+ANN IPGIDFATVH YPDQW+ SSN++DQLSFLNNWL
Sbjct: 244 YGQSTPQRTKFNPTINNIGTDFIANNRIPGIDFATVHCYPDQWVQSSNEQDQLSFLNNWL 303
Query: 303 DTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLF 362
H DA++ L+KPIL+AEFGKS KD G+S+ QRD +FNTVYYKIY+SAKRGG A+G LF
Sbjct: 304 SAHFLDAQYALKKPILVAEFGKSFKDSGFSSNQRDQLFNTVYYKIYASAKRGGPASGALF 363
Query: 363 WQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSR-GMR 421
WQLLTEGM++F DGY I+L QS STANVI QQ+HKLY IRKI+A++ N R KR+R R
Sbjct: 364 WQLLTEGMESFDDGYGILLGQSTSTANVIAQQSHKLYLIRKIYAKIANERRWKRARFNGR 423
Query: 422 RRQRQGGNRGRHIG 435
R R GGNRG IG
Sbjct: 424 RSSRDGGNRGGQIG 437
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430698|ref|XP_002264115.1| PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Vitis vinifera] gi|297735122|emb|CBI17484.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/413 (79%), Positives = 371/413 (89%)
Query: 24 LHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLT 83
+ VEAGDGFIRTRG HF++NG+ Y+ANGFNAYWLMY+ASDPSQR+KVS AF EA+SHGLT
Sbjct: 21 VQVEAGDGFIRTRGVHFVMNGSPYYANGFNAYWLMYLASDPSQRAKVSAAFREASSHGLT 80
Query: 84 VARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143
VARTWAFSDGGYRPLQ SPG YN+QMFKGLDFV+AEAR+YGIKLILSL NNY+SFGGKKQ
Sbjct: 81 VARTWAFSDGGYRPLQYSPGFYNQQMFKGLDFVVAEARRYGIKLILSLVNNYESFGGKKQ 140
Query: 144 YVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMN 203
YVNWARS+GQ L+S+DDFFRNPVVKGYYK+ +KTVLNRYN+FTG+ YK+DPTIMAWELMN
Sbjct: 141 YVNWARSRGQHLSSEDDFFRNPVVKGYYKSHVKTVLNRYNSFTGVIYKNDPTIMAWELMN 200
Query: 204 EPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTD 263
EPRCTSDPSGRTIQAWI EMAS+VKSIDRNHLLEAGLEGFYGQ+TP R R+NP IGTD
Sbjct: 201 EPRCTSDPSGRTIQAWIMEMASFVKSIDRNHLLEAGLEGFYGQTTPWRTRLNPGYYIGTD 260
Query: 264 FVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFG 323
F+ANN I GIDFATVHSYPDQWLS SN++ QLSFLNNWL HIQDA++ILRKP+LL EFG
Sbjct: 261 FIANNRIRGIDFATVHSYPDQWLSGSNEQSQLSFLNNWLGAHIQDAQNILRKPVLLTEFG 320
Query: 324 KSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQ 383
KS KDPG+STYQRD +FNTVY +IYSSA+RGGAAAGGLFWQLLTEGMD+FRDGY+IVLS+
Sbjct: 321 KSWKDPGFSTYQRDQLFNTVYNQIYSSARRGGAAAGGLFWQLLTEGMDSFRDGYDIVLSE 380
Query: 384 SPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQRQGGNRGRHIGN 436
SPSTANVI QQ+ K+ QIRKIFARMRN+ + K +R RR + NR + IGN
Sbjct: 381 SPSTANVIAQQSRKIDQIRKIFARMRNMTKWKSARASRRAEWLARNRSKRIGN 433
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449451545|ref|XP_004143522.1| PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Cucumis sativus] gi|449521449|ref|XP_004167742.1| PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/409 (79%), Positives = 366/409 (89%), Gaps = 7/409 (1%)
Query: 7 AFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQ 66
A+ LA FIH V GDGF+RT + FLLNG+ Y+ANGFNAYWLMYVASDPSQ
Sbjct: 5 VLALLLAIFIH-------GVAGGDGFVRTGRTRFLLNGSPYYANGFNAYWLMYVASDPSQ 57
Query: 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIK 126
RSKVS F EA+SHGLTVARTWAFSDGGYRPLQ SPG+YNEQMF+G+DFV+AEAR++GIK
Sbjct: 58 RSKVSAVFREASSHGLTVARTWAFSDGGYRPLQYSPGNYNEQMFQGMDFVVAEARRFGIK 117
Query: 127 LILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186
LILSL NNY++FGGKKQYVNWARS+GQ+L SDDDFFRNPVVKG+YKN I+TVLNRYN FT
Sbjct: 118 LILSLVNNYENFGGKKQYVNWARSKGQYLNSDDDFFRNPVVKGFYKNHIRTVLNRYNRFT 177
Query: 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQ 246
IHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWI EMAS+VKSIDRNHLLEAGLEGFYG
Sbjct: 178 TIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIMEMASFVKSIDRNHLLEAGLEGFYGH 237
Query: 247 STPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHI 306
S+PQR R+NP +IGTDF+ANN IPGIDFAT+HSYPDQWLSSSND+ QLSFLNNW+ THI
Sbjct: 238 SSPQRMRLNPGFNIGTDFIANNRIPGIDFATLHSYPDQWLSSSNDQYQLSFLNNWISTHI 297
Query: 307 QDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLL 366
QDAE ILRKPILL EFGKS K PGYST +RD++FNTVY KIY+SA+RGGAAAGGLFWQLL
Sbjct: 298 QDAESILRKPILLTEFGKSWKVPGYSTNERDLLFNTVYSKIYASARRGGAAAGGLFWQLL 357
Query: 367 TEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRK 415
TEGMD+FRDGYEI+LSQ+PSTANVITQQ+ +LYQIR+I+ARMRN+ER K
Sbjct: 358 TEGMDSFRDGYEIILSQNPSTANVITQQSRRLYQIRRIYARMRNIERWK 406
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496721|ref|XP_003517214.1| PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/432 (74%), Positives = 366/432 (84%), Gaps = 3/432 (0%)
Query: 5 HLAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
H A LA + ++ F+V VEA D F+RTRG HF+LNG Y+ANGFNAYWLMY ASDP
Sbjct: 3 HFALVFLLAILVPQECFHV-SVEARDDFVRTRGIHFMLNGYPYYANGFNAYWLMYTASDP 61
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
SQR KVS AF EAASHGLTVARTWAFSDGGYRPLQ SPG YNEQMF GLDFV++EARKYG
Sbjct: 62 SQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYSPGFYNEQMFTGLDFVVSEARKYG 121
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IKLILSL NNY++FGGKKQYVNWARS GQ+LTSDDDFFR+PVVKGYY N ++TVLNRYN
Sbjct: 122 IKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNR 181
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FTG+HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS++KSIDRNHLLEAGLEGFY
Sbjct: 182 FTGMHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASFLKSIDRNHLLEAGLEGFY 241
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304
GQSTPQRK +NP +IGTDF+ANN IP IDFATVH YPDQW+SSSN + QLSFLNNWL
Sbjct: 242 GQSTPQRKTMNPGFNIGTDFIANNRIPAIDFATVHCYPDQWVSSSNIQYQLSFLNNWLSA 301
Query: 305 HIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364
H DA++ ++KPIL+AEFGKS K G S+Y+RD +FN+VYYKIY+SAKRGGAA+G LFWQ
Sbjct: 302 HFIDAQYHIKKPILVAEFGKSFK--GSSSYERDEVFNSVYYKIYASAKRGGAASGALFWQ 359
Query: 365 LLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQ 424
LLTEGM++F+DGY I+L QS STAN+I +Q+ KLY IRKIFAR+ N+ R +R+R
Sbjct: 360 LLTEGMESFQDGYGIILGQSSSTANLIARQSRKLYLIRKIFARVANMRRWQRARARGFSG 419
Query: 425 RQGGNRGRHIGN 436
GGN GR+I N
Sbjct: 420 SGGGNGGRYIDN 431
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255637304|gb|ACU18982.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/432 (73%), Positives = 365/432 (84%), Gaps = 3/432 (0%)
Query: 5 HLAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP 64
H A LA + ++ F+V VEA D F+R RG HF+LNG Y+ANGFNAYWLMY ASDP
Sbjct: 3 HFALVFLLAILVPQECFHV-SVEARDDFVRARGIHFMLNGYPYYANGFNAYWLMYTASDP 61
Query: 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYG 124
SQR KVS AF EAASHGLTVARTWAFSDGGYRPLQ SPG YNEQMF GLDFV++EARKYG
Sbjct: 62 SQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYSPGFYNEQMFTGLDFVVSEARKYG 121
Query: 125 IKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
IKLILSL NNY++FGGKKQYVNWARS GQ+LTSDDDFFR+PVVKGYY N ++TVLNRYN
Sbjct: 122 IKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNR 181
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
FTG+HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS++KSIDRNHLLEAGLEGFY
Sbjct: 182 FTGMHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASFLKSIDRNHLLEAGLEGFY 241
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304
GQSTPQRK +NP +IGTDF+ANN IP IDFATVH YPDQW+SSSN + QLSFLNNWL
Sbjct: 242 GQSTPQRKTMNPGFNIGTDFIANNRIPAIDFATVHCYPDQWVSSSNIQYQLSFLNNWLSA 301
Query: 305 HIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364
H DA++ ++KPIL+AEFGKS K G S+Y+RD +FN+VYYKIY+SAKRGGAA+G LFWQ
Sbjct: 302 HFIDAQYHIKKPILVAEFGKSFK--GSSSYERDEVFNSVYYKIYASAKRGGAASGALFWQ 359
Query: 365 LLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIRKIFARMRNVERRKRSRGMRRRQ 424
LLTEGM++F+DGY I+L QS STAN+I +Q+ KLY IRKIFAR+ N+ R +R+R
Sbjct: 360 LLTEGMESFQDGYGIILGQSSSTANLIARQSRKLYLIRKIFARVANMRRWQRARARGFSG 419
Query: 425 RQGGNRGRHIGN 436
GGN GR+I N
Sbjct: 420 SGGGNGGRYIDN 431
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 436 | ||||||
| TAIR|locus:2154905 | 431 | MAN7 "AT5G66460" [Arabidopsis | 0.876 | 0.886 | 0.719 | 1.2e-154 | |
| TAIR|locus:2103262 | 414 | AT3G10890 [Arabidopsis thalian | 0.857 | 0.903 | 0.530 | 2.3e-117 | |
| TAIR|locus:2103197 | 408 | AT3G10900 [Arabidopsis thalian | 0.871 | 0.931 | 0.526 | 2.9e-112 | |
| TAIR|locus:2180987 | 448 | MAN6 "endo-beta-mannase 6" [Ar | 0.839 | 0.816 | 0.512 | 1.3e-107 | |
| TAIR|locus:2204878 | 411 | MAN1 "endo-beta-mannanase 1" [ | 0.862 | 0.914 | 0.494 | 3e-101 | |
| TAIR|locus:2051399 | 433 | MAN2 "endo-beta-mannase 2" [Ar | 0.866 | 0.872 | 0.460 | 1.8e-94 | |
| TAIR|locus:2123628 | 431 | MAN5 "endo-beta-mannase 5" [Ar | 0.850 | 0.860 | 0.453 | 3e-92 | |
| UNIPROTKB|G4NI55 | 407 | MGG_11999 "Mannan endo-1,4-bet | 0.616 | 0.660 | 0.326 | 1.8e-32 | |
| ASPGD|ASPL0000003297 | 399 | manC [Emericella nidulans (tax | 0.612 | 0.669 | 0.330 | 7.7e-32 | |
| UNIPROTKB|Q5AZ53 | 399 | manC "Mannan endo-1,4-beta-man | 0.612 | 0.669 | 0.330 | 7.7e-32 |
| TAIR|locus:2154905 MAN7 "AT5G66460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1508 (535.9 bits), Expect = 1.2e-154, P = 1.2e-154
Identities = 275/382 (71%), Positives = 322/382 (84%)
Query: 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAF 90
GF+RT+G F LNG Y+ANGFNAYWLMYVASDPSQRSK+STAF +A+ HGLTVARTWAF
Sbjct: 30 GFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVARTWAF 89
Query: 91 SDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
SDGGYR LQ SPGSYNE MF+GLDF +AEAR++GIK+ILS ANNY+SFGG+KQYV+WARS
Sbjct: 90 SDGGYRALQYSPGSYNEDMFQGLDFALAEARRHGIKIILSFANNYESFGGRKQYVDWARS 149
Query: 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD 210
+G+ ++S+DDFF + +VK +YKN IK VLNR+NTFT +HYKDDPTIMAWELMNEPRC SD
Sbjct: 150 RGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPRCPSD 209
Query: 211 PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI 270
PSGR IQAWITEMA++VKS+DRNHLLEAGLEGFYGQS+PQ K +NP GTDF+ANN I
Sbjct: 210 PSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNPPGQFGTDFIANNRI 269
Query: 271 PGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG 330
PGIDF TVHSYPD+W S+++ Q+ FLN WLD HIQDA+++L KPI+LAEFGKS K PG
Sbjct: 270 PGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFGKSMKKPG 329
Query: 331 YSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANV 390
Y+ QRD++FNTVY KIY SAKR LFWQLL G+D F+DGY I+LSQS ST NV
Sbjct: 330 YTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQLLVNGIDNFQDGYGIILSQSSSTVNV 389
Query: 391 ITQQAHKLYQIRKIFARMRNVE 412
I+QQ+ KL IRKIFARM NVE
Sbjct: 390 ISQQSRKLTLIRKIFARMINVE 411
|
|
| TAIR|locus:2103262 AT3G10890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 201/379 (53%), Positives = 281/379 (74%)
Query: 28 AGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVART 87
+ DGF+ +G F+LNG ++ANGFNAYWL Y A+D + R K++ F A H LT+ RT
Sbjct: 27 SSDGFVSRKGVQFILNGKPFYANGFNAYWLAYEATDSTTRFKITYVFQNATIHDLTIVRT 86
Query: 88 WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNW 147
W F DGGYR LQ +PG Y+E+ F+GLDF IAEA++ GIK+I++ NNY FGG+KQYV+W
Sbjct: 87 WGFRDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRKQYVDW 146
Query: 148 ARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207
A++ GQ ++SDDDF+ NP+VK YYKN +KT++NR NTFT + YKD+PTIM WELMNEP+C
Sbjct: 147 AKNTGQNVSSDDDFYTNPLVKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQC 206
Query: 208 TSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR-VNP---NLDIGTD 263
+DPSG+T+ AW+ EMA YVKS+D HLL GLEGFYG S+PQRK +NP N+ +GTD
Sbjct: 207 RADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANV-LGTD 265
Query: 264 FVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFG 323
F+AN+ + IDFA++HSYPD W + +++ +L+ L WL+ H++DA++IL+KP++L EFG
Sbjct: 266 FIANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFG 325
Query: 324 KSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQ 383
K PGY+ QRD +FN + IY SA++ LFW ++++GM+ F+D IVLS+
Sbjct: 326 KPTNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGALFWHVISDGMNNFKDPLSIVLSE 385
Query: 384 SPSTANVITQQAHKLYQIR 402
+ +T N+IT+++ KL IR
Sbjct: 386 NSTTVNIITEESRKLGLIR 404
|
|
| TAIR|locus:2103197 AT3G10900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 202/384 (52%), Positives = 271/384 (70%)
Query: 19 QSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA 78
QS+ + DGF+ G F+LNG ++ANGFNAYWL Y A+DP+ R K++ F A
Sbjct: 16 QSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPTTRFKITNVFQNAT 75
Query: 79 SHGLTVARTWAFSDGG-YRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137
S GLT+ARTW F DG YR LQ +PGSY+EQ F+GLDFVIAEA++ GIKLI+ L NN+D
Sbjct: 76 SLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIGIKLIILLVNNWDD 135
Query: 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197
+GGKKQYV+WARS+G+ ++S+DDF+RNPV+K +YKN +KTVLNR NTFT + YKD+P IM
Sbjct: 136 YGGKKQYVDWARSKGEVVSSNDDFYRNPVIKDFYKNHVKTVLNRVNTFTKVAYKDEPAIM 195
Query: 198 AWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR-VNP 256
AW+LMNEPRC D SG+T+ WI EMA +VKS+D NHLL G EGFYG S+P+RK +NP
Sbjct: 196 AWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGFYGDSSPERKNSLNP 255
Query: 257 NL--DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILR 314
+G DF+AN+ I IDFA++H D W + +L+F+ WL+ HI+DA++IL+
Sbjct: 256 VSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNILK 315
Query: 315 KPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFR 374
KP++LAEFG P Y+ RD +F T Y IY+SA++ LFW++++EGM F
Sbjct: 316 KPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAGALFWEVISEGMSNFA 375
Query: 375 DGYEIVLSQSPSTANVITQQAHKL 398
I+LS ST N+I++ A K+
Sbjct: 376 GPSSIILSDKSSTVNIISEHARKM 399
|
|
| TAIR|locus:2180987 MAN6 "endo-beta-mannase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 189/369 (51%), Positives = 259/369 (70%)
Query: 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSD 92
++ +G F LNG ++ NGFN YW+M +A+D S R KV+ F +A++ G+TV RTWAF+D
Sbjct: 48 VQRKGMQFTLNGQPFYVNGFNTYWMMTLAADNSTRGKVTEVFQQASAVGMTVGRTWAFND 107
Query: 93 GGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQG 152
G +R LQ+SP Y+E++FK LDFV++EARKY I+LILSL NN+D++GGK QYV W + G
Sbjct: 108 GQWRALQKSPSVYDEEVFKALDFVLSEARKYKIRLILSLVNNWDAYGGKAQYVKWGNASG 167
Query: 153 QFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPS 212
LTSDDDFF NP ++ +Y++ ++TVLNR NTFT I YK+DPTI AWELMNEPRC SDPS
Sbjct: 168 LNLTSDDDFFTNPTLRNFYQSHVRTVLNRVNTFTNITYKNDPTIFAWELMNEPRCPSDPS 227
Query: 213 GRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN---LDIGTDFVANNL 269
G +Q+WI EMA +VKS+D HL+E GLEGFYG S P R R NPN +GTDF+ NN
Sbjct: 228 GDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGTDFIRNNQ 287
Query: 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329
+ GIDFA+VH YPD W+S + L F ++W+ H++DAE L P+L EFG S DP
Sbjct: 288 VLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDAEMYLGMPVLFTEFGVSAHDP 347
Query: 330 GYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTAN 389
G++T RD+M NTVY +S ++ L WQ+ +G + DGY + L+++ + +
Sbjct: 348 GFNTSFRDMMLNTVYKMTLNSTRKGGAGAGSLVWQVFPQGAEFMDDGYAVYLTRAHTASK 407
Query: 390 VITQQAHKL 398
+I+ Q+ +L
Sbjct: 408 IISLQSKRL 416
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| TAIR|locus:2204878 MAN1 "endo-beta-mannanase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 192/388 (49%), Positives = 257/388 (66%)
Query: 22 NVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQ--RSKVSTAFHEAAS 79
N + V GF+ G+ F+LNG + NGFNAYW+M A+D + R+ V+TA +A++
Sbjct: 19 NRICVAVKTGFVGRNGTQFVLNGEQVYLNGFNAYWMMTTAADTASKGRATVTTALRQASA 78
Query: 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139
G+ VAR W F++G Y PLQ SPGSY+E +FKGLDFV+ EA ++ IKLI+SL NN++ +G
Sbjct: 79 VGMNVARIWGFNEGDYIPLQISPGSYSEDVFKGLDFVVYEAGRFNIKLIISLVNNFEDYG 138
Query: 140 GKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199
G+K+YV WA G L D+F+ N VK +YKN +KTVL R NT TG YKDDPTI +W
Sbjct: 139 GRKKYVEWA---G--LDEPDEFYTNSAVKQFYKNHVKTVLTRKNTITGRMYKDDPTIFSW 193
Query: 200 ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD 259
EL+NEPRC + +Q W+ EMASYVKSID NHLLE GLEGFYG+S P+R NP
Sbjct: 194 ELINEPRCNDSTASNILQDWVKEMASYVKSIDSNHLLEIGLEGFYGESIPERTVYNPGGR 253
Query: 260 I--GTDFVANNLIPGIDFATVHSYPDQWL--SSSNDRDQLSFLNNWLDTHIQDAEHILRK 315
+ GTDF+ NN IP IDFAT+H YPD WL SS +Q +F++ W+ HI+D ++I++K
Sbjct: 254 VLTGTDFITNNQIPDIDFATIHIYPDSWLPLQSSRTGEQDTFVDRWIGAHIEDCDNIIKK 313
Query: 316 PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRD 375
P+L+ EFGKS K PG+S +R+ F VY IY SA+ +FWQL T D
Sbjct: 314 PLLITEFGKSSKYPGFSLEKRNKFFQRVYDVIYDSARAGGSCTGGVFWQLTTNRTGLLGD 373
Query: 376 GYEIVLSQSPST-ANVITQQAHKLYQIR 402
GYE+ + P+T A +I Q+ KL ++
Sbjct: 374 GYEVFMQAGPNTTAQLIADQSSKLKNLK 401
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| TAIR|locus:2051399 MAN2 "endo-beta-mannase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 176/382 (46%), Positives = 246/382 (64%)
Query: 24 LHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLT 83
L E F++ G+ F+++G + NG+N+YW M A + R +VS A GLT
Sbjct: 34 LKTEGELAFVKRNGTQFVVDGKALYVNGWNSYWFMDHAVNDHSRHRVSAMLEAGAKMGLT 93
Query: 84 VARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143
V RTWAF+DGGY LQ SPG ++E++FK LD VIAEA+ +G++L+LSL NN ++GGK Q
Sbjct: 94 VCRTWAFNDGGYNALQISPGRFDERVFKALDHVIAEAKTHGVRLLLSLVNNLQAYGGKTQ 153
Query: 144 YVNWARSQGQFLTSDDD-FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELM 202
YVNWA +G L+S +D FF +P ++ Y+KN + +L R N+ TGI Y++DPTI AWEL+
Sbjct: 154 YVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNYLTVLLTRKNSLTGIEYRNDPTIFAWELI 213
Query: 203 NEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL---D 259
NEPRC SD SG T+Q WI EM +++KSID HLL GLEGFYG S+P++ VNP +
Sbjct: 214 NEPRCMSDVSGDTLQDWINEMTAFIKSIDNKHLLTVGLEGFYGPSSPKKLTVNPERWASE 273
Query: 260 IGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILL 319
+G+DFV N+ P IDFA+VH YPD W ++L F+ W+ +HI+D + L+KP+L
Sbjct: 274 LGSDFVRNSDSPNIDFASVHIYPDHWFHDQGFEEKLKFVVKWMLSHIEDGDKELKKPVLF 333
Query: 320 AEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEI 379
EFG S + Y QRD + T++ IY SAKR L WQ L EGM+ F D + I
Sbjct: 334 TEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSAKRKRSGAGTLVWQFLIEGMEGFNDDFGI 393
Query: 380 VLSQSPSTANVITQQAHKLYQI 401
V + S ++ +Q+ +L +I
Sbjct: 394 VPWEQDSIQRLMIEQSCRLSRI 415
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| TAIR|locus:2123628 MAN5 "endo-beta-mannase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 170/375 (45%), Positives = 241/375 (64%)
Query: 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAF 90
GF++ G+ F+++ + NG+N+YW M A D R+ V A GLTV RTWAF
Sbjct: 40 GFVKRNGTQFVVDDKPLYVNGWNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCRTWAF 99
Query: 91 SDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
+DGGY LQ SPG ++E++F+ LD VIAEARK+ ++L+LSL NN ++GGK QYV WA
Sbjct: 100 NDGGYNALQISPGRFDERVFQALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVKWAWQ 159
Query: 151 QGQFLTSDDD-FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209
+G L+S +D FF +P ++ Y+KN +K +L R N+ TGI Y++DPTI AWEL+NEPRCT+
Sbjct: 160 EGVGLSSSNDSFFFDPSIRNYFKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTT 219
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL---DIGTDFVA 266
D SG+T+Q WI EM ++KSID HLL GLEGFYG ++P+ VNP +GTDFV
Sbjct: 220 DVSGKTLQDWIDEMTGFIKSIDDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQ 279
Query: 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR 326
N+ IDFA+VH YPD W + ++L F+ W+ +HI+D L+KP+L EFG S
Sbjct: 280 NSNSSNIDFASVHIYPDHWFHNQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLSN 339
Query: 327 KDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPS 386
++ Y QRD + ++ +Y SAKR L WQL EGM+ F D + IV + S
Sbjct: 340 QNKDYEPSQRDKFYRIIFDVVYKSAKRKKSGAGTLVWQLFMEGMETFNDDFGIVPHEQDS 399
Query: 387 TANVITQQAHKLYQI 401
++ +Q+ +L ++
Sbjct: 400 IYKLMIEQSCRLGKV 414
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| UNIPROTKB|G4NI55 MGG_11999 "Mannan endo-1,4-beta-mannosidase C" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 106/325 (32%), Positives = 152/325 (46%)
Query: 27 EAGDGFIRTRGSHFLLNG-NLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVA 85
+A GF+ G F L+G + YFA G NAY+ + S ++ V +A GL V
Sbjct: 29 QAKSGFVSVEGEKFKLDGKDFYFA-GTNAYYFPFSGS----QTDVENGMTQAKKAGLNVV 83
Query: 86 RTWAFSD------GGYRPLQRSPGSYNEQMFKG----------LDFVIAEARKYGIKLIL 129
RTW F+D G P + + Q F G D V+ A K +KL++
Sbjct: 84 RTWGFNDKNRTTNSGGLPQYSADSNPTFQYFNGNQDSTIDVTPFDKVVNAATKTNMKLVV 143
Query: 130 SLANNYDSFGGKKQY-VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188
+L NN+ +GG Y VN G++ DDF+ P +K +K I+ ++ RY
Sbjct: 144 ALTNNWADYGGMDVYTVNLG---GKY---HDDFYTVPKIKDAFKRYIRAMVTRY------ 191
Query: 189 HYKDDPTIMAWELMNEPRCTSD-----PSGR-----TIQAWITEMASYVKSIDRNHLLEA 238
D P IMAWE+ NEPRC +D P G TI AWI EM++++KSID HL+
Sbjct: 192 --ADSPAIMAWEIANEPRCGADSVRNLPRGPSCTPDTITAWIDEMSTFIKSIDSKHLVTW 249
Query: 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
G EG G + P N G DF +P +DF HSYPD W + + ++
Sbjct: 250 GGEG--GFNIPSNSDGFYNGYDGGDFDKELSLPNVDFGVFHSYPDWWSKT------IDWV 301
Query: 299 NNWLDTHIQDAEHILRKPILLAEFG 323
+ W+ H KP++ E+G
Sbjct: 302 DQWIRDHAASGRKA-GKPVVHEEYG 325
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| ASPGD|ASPL0000003297 manC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 108/327 (33%), Positives = 156/327 (47%)
Query: 28 AGDGFIRTRGSHFLLNG-NLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVAR 86
A GF+ T+G F L+G + YFA G NAY+ + + ++ V A GL V R
Sbjct: 18 ARKGFVTTKGDKFQLDGKDFYFA-GSNAYYFPF----NNNQTDVELGLSAAKKAGLLVFR 72
Query: 87 TWAFSDGGYRPLQRSPGSYN-------EQMFK----G--------LDFVIAEARKYGIKL 127
TW F+D ++ Y E +F+ G D V+ A K GIKL
Sbjct: 73 TWGFNDKNVTYIEDGLPQYGGEGAGTTEVVFQWWQNGTSTIDLEPFDKVVNAAAKTGIKL 132
Query: 128 ILSLANNYDSFGGKKQY-VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186
I++L NN+ +GG Y VN GQ+ DDF+R P +K YK +K ++ RY
Sbjct: 133 IVTLVNNWADYGGMDVYTVNLG---GQY---HDDFYRLPQIKKAYKRYVKEMVTRY---- 182
Query: 187 GIHYKDDPTIMAWELMNEPRCTSD-----PSG-----RTIQAWITEMASYVKSIDRNHLL 236
++ P IMAWEL NEPRC +D P+ + +WI EM++YVK +D +HL+
Sbjct: 183 ----RNSPAIMAWELANEPRCGADGVRNLPASDECTPELLTSWIDEMSTYVKRLDPHHLV 238
Query: 237 EAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLS 296
G EG + + N G DF A + IDF HSYPD W + +
Sbjct: 239 TWGGEGGFNYDSDDWAY---NGSDGGDFEAELKLKNIDFGVFHSYPDWWSKT------VE 289
Query: 297 FLNNWLDTHIQDAEHILRKPILLAEFG 323
+ N W+ H + A + KP++ E+G
Sbjct: 290 WTNKWIVDHARAARRV-GKPVVHEEYG 315
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| UNIPROTKB|Q5AZ53 manC "Mannan endo-1,4-beta-mannosidase C" [Aspergillus nidulans FGSC A4 (taxid:227321)] | Back alignment and assigned GO terms |
|---|
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 108/327 (33%), Positives = 156/327 (47%)
Query: 28 AGDGFIRTRGSHFLLNG-NLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVAR 86
A GF+ T+G F L+G + YFA G NAY+ + + ++ V A GL V R
Sbjct: 18 ARKGFVTTKGDKFQLDGKDFYFA-GSNAYYFPF----NNNQTDVELGLSAAKKAGLLVFR 72
Query: 87 TWAFSDGGYRPLQRSPGSYN-------EQMFK----G--------LDFVIAEARKYGIKL 127
TW F+D ++ Y E +F+ G D V+ A K GIKL
Sbjct: 73 TWGFNDKNVTYIEDGLPQYGGEGAGTTEVVFQWWQNGTSTIDLEPFDKVVNAAAKTGIKL 132
Query: 128 ILSLANNYDSFGGKKQY-VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186
I++L NN+ +GG Y VN GQ+ DDF+R P +K YK +K ++ RY
Sbjct: 133 IVTLVNNWADYGGMDVYTVNLG---GQY---HDDFYRLPQIKKAYKRYVKEMVTRY---- 182
Query: 187 GIHYKDDPTIMAWELMNEPRCTSD-----PSG-----RTIQAWITEMASYVKSIDRNHLL 236
++ P IMAWEL NEPRC +D P+ + +WI EM++YVK +D +HL+
Sbjct: 183 ----RNSPAIMAWELANEPRCGADGVRNLPASDECTPELLTSWIDEMSTYVKRLDPHHLV 238
Query: 237 EAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLS 296
G EG + + N G DF A + IDF HSYPD W + +
Sbjct: 239 TWGGEGGFNYDSDDWAY---NGSDGGDFEAELKLKNIDFGVFHSYPDWWSKT------VE 289
Query: 297 FLNNWLDTHIQDAEHILRKPILLAEFG 323
+ N W+ H + A + KP++ E+G
Sbjct: 290 WTNKWIVDHARAARRV-GKPVVHEEYG 315
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q0JKM9 | MAN1_ORYSJ | 3, ., 2, ., 1, ., 7, 8 | 0.6822 | 0.8738 | 0.8819 | yes | no |
| Q9FUQ6 | MAN3_SOLLC | 3, ., 2, ., 1, ., 7, 8 | 0.5374 | 0.8463 | 0.9201 | N/A | no |
| Q6YM50 | MAN5_SOLLC | 3, ., 2, ., 1, ., 7, 8 | 0.5625 | 0.9105 | 0.9589 | N/A | no |
| Q9FJZ3 | MAN7_ARATH | 3, ., 2, ., 1, ., 7, 8 | 0.6921 | 0.9793 | 0.9907 | yes | no |
| Q8L5J1 | MAN4_SOLLC | 3, ., 2, ., 1, ., 7, 8 | 0.576 | 0.8486 | 0.9273 | N/A | no |
| O48540 | MAN1_SOLLC | 3, ., 2, ., 1, ., 7, 8 | 0.5404 | 0.8692 | 0.9546 | N/A | no |
| Q9FZ03 | MAN2_SOLLC | 3, ., 2, ., 1, ., 7, 8 | 0.5625 | 0.9105 | 0.9589 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.976 |
| 3rd Layer | 3.2.1.78 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00014580001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (433 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 436 | |||
| COG3934 | 587 | COG3934, COG3934, Endo-beta-mannanase [Carbohydrat | 6e-27 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 2e-06 | |
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 0.004 |
| >gnl|CDD|226444 COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 6e-27
Identities = 69/328 (21%), Positives = 109/328 (33%), Gaps = 55/328 (16%)
Query: 40 FLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQ 99
F L N + W ++ A G+ R + DG +
Sbjct: 4 FALGLNRWPRIANIKMWPAI------GNREIKADLEPAGFVGVKDLRLF-ILDG--EDCR 54
Query: 100 RSPGSYNEQ-MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSD 158
G N + +A A +K++++L GG + WA Q S
Sbjct: 55 DKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIVGLKHMGGTNWRIPWAGEQ-----SP 109
Query: 159 DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218
D+ +P +G K ++ ++ Y K DPTI W L NEP + S
Sbjct: 110 DNVIYDPKFRGPGKKYVEDLVKPY--------KLDPTIAGWALRNEPLVEAPISVNNFWD 161
Query: 219 WITEMASYVKSIDRNHLLEAGLEGF-YGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFAT 277
W EM +Y+K +D HL+ G + Q P R +D+A
Sbjct: 162 WSGEMYAYIKWLDDGHLVSVGDPASPWPQYAPYNARFY-----------------VDYAA 204
Query: 278 VHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRD 337
H Y + +S R + ++ + +P+ L EFG S + Q
Sbjct: 205 NHLYR-HYDTSLVSRVSTV----YGKPYLDIPTIMGWQPVNLEEFGFST-----AFGQE- 253
Query: 338 VMFNTVYYKIYSSAKRGGAAAGGLFWQL 365
N+ Y I+ G L W L
Sbjct: 254 ---NSPAYFIWIRLALDTGGDGALIWCL 278
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Length = 587 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 47/287 (16%), Positives = 82/287 (28%), Gaps = 74/287 (25%)
Query: 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSL 131
G V R S GGY P +E +D V+ A G+ +I+
Sbjct: 26 AMIDLVKDWGFNVVRL-PVSWGGYVPNN-PDYLIDENWLNRVDEVVDYAIDNGMYVIIDW 83
Query: 132 ANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191
++ + + K ++K L + RY
Sbjct: 84 HHD-------TWPGDPNGNIDT-------------AKAFFKKLWTQIATRYG-------- 115
Query: 192 DDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVK-------SIDRNHLLEAGLEGFY 244
+ + +ELMNEP W ++ Y + + N+L+ G +
Sbjct: 116 -NNPNVIFELMNEPHGV------DPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWS 168
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPD--------QWLSSSNDRDQLS 296
+PN D +NLI +VH Y +N +L
Sbjct: 169 QNPDGAALN-DPNDD-------DNLI-----YSVHFYAPSHFSGTWFGCEDKTNLAQRLR 215
Query: 297 FLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTV 343
N+ + P+ + EFG D + + +
Sbjct: 216 AAANYALDN--------GIPVFIGEFGGGNADGPCRDE-AEKWLDYL 253
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Length = 269 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 27/133 (20%)
Query: 78 ASHGLTVAR----TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
S G R WA +P K LD I A+K GI +++ L
Sbjct: 83 KSAGFNAVRIPIGYWALQATDGD----NPYLIGLTQLKILDEAINWAKKLGIYVLIDLHG 138
Query: 134 NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193
G + S + + + ++ K + N +K+
Sbjct: 139 YPGGNNG--HEHSGYTSDYKEENENVE---------ATIDIWKFIAN--------RFKNY 179
Query: 194 PTIMAWELMNEPR 206
T++ +EL+NEP
Sbjct: 180 DTVIGFELINEPN 192
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Length = 407 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 436 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 99.97 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.96 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.95 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.9 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.86 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 99.86 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 99.85 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.85 | |
| PLN02998 | 497 | beta-glucosidase | 99.83 | |
| PLN02814 | 504 | beta-glucosidase | 99.82 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 99.82 | |
| PLN02849 | 503 | beta-glucosidase | 99.82 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 99.81 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 99.81 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 99.81 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 99.8 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 99.79 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 99.79 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 99.79 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 99.74 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 99.63 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.61 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 99.54 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 99.52 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 99.5 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 99.5 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 99.44 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.39 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 99.37 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.29 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.11 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 99.11 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 98.95 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.83 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 98.67 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 98.52 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 98.51 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 98.5 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.41 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 98.24 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 98.03 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 97.87 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 97.67 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.3 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 97.13 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 96.64 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 96.52 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 96.47 | |
| PF12891 | 239 | Glyco_hydro_44: Glycoside hydrolase family 44; Int | 96.45 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 96.41 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.29 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 96.26 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.23 | |
| PLN02705 | 681 | beta-amylase | 96.15 | |
| COG3534 | 501 | AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra | 96.08 | |
| PLN02801 | 517 | beta-amylase | 96.07 | |
| PLN02905 | 702 | beta-amylase | 95.99 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 95.98 | |
| PLN02161 | 531 | beta-amylase | 95.94 | |
| PLN02803 | 548 | beta-amylase | 95.89 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 95.77 | |
| PLN00197 | 573 | beta-amylase; Provisional | 95.73 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 95.7 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 95.61 | |
| PLN02960 | 897 | alpha-amylase | 95.54 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 95.31 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 95.24 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 94.91 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 94.68 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 94.62 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 94.3 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 94.27 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 94.21 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 94.06 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 94.01 | |
| COG3664 | 428 | XynB Beta-xylosidase [Carbohydrate transport and m | 93.39 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 93.12 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 93.01 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 92.33 | |
| PLN02361 | 401 | alpha-amylase | 92.24 | |
| PF07488 | 328 | Glyco_hydro_67M: Glycosyl hydrolase family 67 midd | 92.08 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 92.05 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 91.64 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 91.41 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 91.34 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 91.25 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 91.15 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 89.89 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 89.8 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 89.71 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 89.09 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 88.84 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 88.76 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 87.91 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 87.82 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 87.47 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 87.44 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 87.09 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 87.08 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 87.0 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 86.31 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 86.24 | |
| PLN02784 | 894 | alpha-amylase | 86.02 | |
| cd06547 | 339 | GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG | 85.54 | |
| PRK14507 | 1693 | putative bifunctional 4-alpha-glucanotransferase/m | 85.47 | |
| PF00728 | 351 | Glyco_hydro_20: Glycosyl hydrolase family 20, cata | 85.24 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 85.04 | |
| KOG2566 | 518 | consensus Beta-glucocerebrosidase [Carbohydrate tr | 84.48 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 84.26 | |
| cd06570 | 311 | GH20_chitobiase-like_1 A functionally uncharacteri | 83.1 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 82.6 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 82.54 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=246.14 Aligned_cols=264 Identities=25% Similarity=0.429 Sum_probs=186.3
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCc-cCCC-CCChhhhhhHHHHHHHH
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQ-RSPG-SYNEQMFKGLDFVIAEA 120 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq-~~pg-~~~~~~l~~lD~~i~~a 120 (436)
+|+++.+.|+|.+|... ...+++|+.|+++|+|+||+++. |..++ +.|+ .++++.++.||++|++|
T Consensus 4 ~G~~v~~~G~n~~w~~~--------~~~~~~~~~~~~~G~n~VRi~v~----~~~~~~~~~~~~~~~~~~~~ld~~v~~a 71 (281)
T PF00150_consen 4 NGKPVNWRGFNTHWYNP--------SITEADFDQLKALGFNTVRIPVG----WEAYQEPNPGYNYDETYLARLDRIVDAA 71 (281)
T ss_dssp TSEBEEEEEEEETTSGG--------GSHHHHHHHHHHTTESEEEEEEE----STSTSTTSTTTSBTHHHHHHHHHHHHHH
T ss_pred CCCeEEeeeeecccCCC--------CCHHHHHHHHHHCCCCEEEeCCC----HHHhcCCCCCccccHHHHHHHHHHHHHH
Confidence 79999999999986643 26889999999999999999775 33444 4555 48999999999999999
Q ss_pred HHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEE
Q 013811 121 RKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE 200 (436)
Q Consensus 121 ~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~we 200 (436)
+++||+|||++|+.. .|.. ....+...+..++.|.++++.+++| |+++|.|++||
T Consensus 72 ~~~gi~vild~h~~~----------~w~~-------~~~~~~~~~~~~~~~~~~~~~la~~--------y~~~~~v~~~e 126 (281)
T PF00150_consen 72 QAYGIYVILDLHNAP----------GWAN-------GGDGYGNNDTAQAWFKSFWRALAKR--------YKDNPPVVGWE 126 (281)
T ss_dssp HHTT-EEEEEEEEST----------TCSS-------STSTTTTHHHHHHHHHHHHHHHHHH--------HTTTTTTEEEE
T ss_pred HhCCCeEEEEeccCc----------cccc-------cccccccchhhHHHHHhhhhhhccc--------cCCCCcEEEEE
Confidence 999999999999851 1100 0112233455778889999999999 99999999999
Q ss_pred eecCCCCCCCC------ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh-cCCCCc
Q 013811 201 LMNEPRCTSDP------SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN-NLIPGI 273 (436)
Q Consensus 201 L~NEp~~~~~~------~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~-~~~~~i 273 (436)
|+|||...... ..+.+.+|+++++++||+.||+++|++++.++..... ...... ......
T Consensus 127 l~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~~~~~~~~-------------~~~~~~P~~~~~~ 193 (281)
T PF00150_consen 127 LWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGGGWGADPD-------------GAAADNPNDADNN 193 (281)
T ss_dssp SSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEHHHHTBHH-------------HHHHHSTTTTTTS
T ss_pred ecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCCccccccc-------------hhhhcCcccccCc
Confidence 99999986432 2367899999999999999999999998754321100 000011 113567
Q ss_pred ceEEeecCCCCCCC-C-C--ChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 013811 274 DFATVHSYPDQWLS-S-S--NDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 274 D~~s~H~Y~~~w~~-~-~--~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~ 349 (436)
+++++|.|+. +.. . . ...........++..+...+.+ .++||+|+|||....... ...++...+++.+.+
T Consensus 194 ~~~~~H~Y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~pv~~gE~G~~~~~~~----~~~~~~~~~~~~~~~ 267 (281)
T PF00150_consen 194 DVYSFHFYDP-YDFSDQWNPGNWGDASALESSFRAALNWAKK-NGKPVVVGEFGWSNNDGN----GSTDYADAWLDYLEQ 267 (281)
T ss_dssp EEEEEEEETT-TCHHTTTSTCSHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEESSTTTSC----HHHHHHHHHHHHHHH
T ss_pred eeEEeeEeCC-CCcCCccccccchhhhHHHHHHHHHHHHHHH-cCCeEEEeCcCCcCCCCC----cCHHHHHHHHHHHHH
Confidence 8999999985 321 1 0 0111233445566666666665 799999999999844321 223333334433322
Q ss_pred HhhcCCCccceeecccccC
Q 013811 350 SAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~ 368 (436)
...|+++|+|.++
T Consensus 268 ------~~~g~~~W~~~~~ 280 (281)
T PF00150_consen 268 ------NGIGWIYWSWKPN 280 (281)
T ss_dssp ------TTCEEEECEESSS
T ss_pred ------CCCeEEEEecCCC
Confidence 3679999999875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-31 Score=255.72 Aligned_cols=292 Identities=22% Similarity=0.311 Sum_probs=214.1
Q ss_pred EEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhh-hhhHHHHHH
Q 013811 40 FLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQM-FKGLDFVIA 118 (436)
Q Consensus 40 f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~-l~~lD~~i~ 118 (436)
|.++++.+.+.+.+-+|..+. ...++++|+.++.+|++++|+|.. ||.. .....|.-+... +.+++.+++
T Consensus 4 F~Lg~n~wprIanikmw~~~~------~~ei~~dle~a~~vg~k~lR~fiL-DgEd--c~d~~G~~na~s~~~y~~~fla 74 (587)
T COG3934 4 FALGLNRWPRIANIKMWPAIG------NREIKADLEPAGFVGVKDLRLFIL-DGED--CRDKEGYRNAGSNVWYAAWFLA 74 (587)
T ss_pred EEeccccchhhhhhhHHHHhh------hhhhhcccccccCccceeEEEEEe-cCcc--hhhhhceecccccHHHHHHHhh
Confidence 555666666666555565542 257899999999999999999954 4321 122334444443 899999999
Q ss_pred HHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEE
Q 013811 119 EARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMA 198 (436)
Q Consensus 119 ~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~ 198 (436)
.|..++|+|+++|.+.|.++||++++..|++. +++++++-|++.+.-+++|++.+|+. ||.+|+|++
T Consensus 75 ~a~~l~lkvlitlivg~~hmgg~Nw~Ipwag~-----~~pdn~iyD~k~~~~~kkyvedlVk~--------yk~~ptI~g 141 (587)
T COG3934 75 PAGYLDLKVLITLIVGLKHMGGTNWRIPWAGE-----QSPDNVIYDPKFRGPGKKYVEDLVKP--------YKLDPTIAG 141 (587)
T ss_pred hcccCcceEEEEEeecccccCcceeEeecCCC-----CCccccccchhhcccHHHHHHHHhhh--------hccChHHHH
Confidence 99999999999999999999999999999743 25688899999999999999999998 999999999
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCccc-CCCCCccccCCCCCcccchhhhhcCCCCcceEE
Q 013811 199 WELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY-GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFAT 277 (436)
Q Consensus 199 weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~-~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s 277 (436)
|.+.|||.+....+..++..|..+|.++||.+||+|+|++|.+++. ..- -| ......+|+.+
T Consensus 142 w~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hlvsvGD~~sp~~~~-------~p----------yN~r~~vDya~ 204 (587)
T COG3934 142 WALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHLVSVGDPASPWPQY-------AP----------YNARFYVDYAA 204 (587)
T ss_pred HHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCeeecCCcCCccccc-------CC----------cccceeecccc
Confidence 9999999987766788999999999999999999999999997652 111 11 12234789999
Q ss_pred eecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcC-CcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCC
Q 013811 278 VHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILR-KPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGA 356 (436)
Q Consensus 278 ~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~-kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~ 356 (436)
.|.|| .|.... .......|...+++..+. .+ +||+++|||++...+.. +..-+..+....++. +
T Consensus 205 ~hLY~-hyd~sl----~~r~s~~yg~~~l~i~~~-~g~~pV~leefGfsta~g~e----~s~ayfiw~~lal~~-----g 269 (587)
T COG3934 205 NHLYR-HYDTSL----VSRVSTVYGKPYLDIPTI-MGWQPVNLEEFGFSTAFGQE----NSPAYFIWIRLALDT-----G 269 (587)
T ss_pred chhhh-hccCCh----hheeeeeecchhhccchh-cccceeeccccCCccccccc----ccchhhhhhhhHHhh-----c
Confidence 99998 454321 112223345556666665 66 99999999999875321 111122222222332 5
Q ss_pred ccceeecccccCCC------CCCC---CCceEEeCCCc
Q 013811 357 AAGGLFWQLLTEGM------DAFR---DGYEIVLSQSP 385 (436)
Q Consensus 357 ~~G~~~W~~~~~g~------~~~~---dg~~i~~~~d~ 385 (436)
.-|+++||+.+... ..|. .+|+|+-.+.+
T Consensus 270 gdGaLiwclsdf~~gsdd~ey~w~p~el~fgiIradgp 307 (587)
T COG3934 270 GDGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRADGP 307 (587)
T ss_pred CCceEEEEecCCccCCCCCCCccccccceeeeecCCCc
Confidence 67999999998652 1242 47888877554
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-26 Score=240.77 Aligned_cols=290 Identities=16% Similarity=0.221 Sum_probs=191.9
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |+++++.|.+||+|++++|+|.|........+.+.+.+.++|+.||++|+|+||+... | .+
T Consensus 272 ~~GfR~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~-----p--------~~ 338 (604)
T PRK10150 272 RFGIRSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHY-----P--------YS 338 (604)
T ss_pred eeEEEEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccC-----C--------CC
Confidence 4576 7888999999999999999998765543323345678899999999999999999322 1 12
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEeccc--CCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLAN--NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~--~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
.+++++|.++||+|+-.+.. ...+.+.. +. +. ............+|+..+.+.+.++++|.|
T Consensus 339 -------~~~~~~cD~~GllV~~E~p~~~~~~~~~~~--~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r--- 402 (604)
T PRK10150 339 -------EEMLDLADRHGIVVIDETPAVGLNLSFGAG--LE-AG---NKPKETYSEEAVNGETQQAHLQAIRELIAR--- 402 (604)
T ss_pred -------HHHHHHHHhcCcEEEEeccccccccccccc--cc-cc---ccccccccccccchhHHHHHHHHHHHHHHh---
Confidence 26789999999999877642 11111100 00 00 000000011123577888999999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchh
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df 264 (436)
++|||+|++|.++||+... .+....++++|.+.+|++||+|+|+.+...+... +
T Consensus 403 -----~~NHPSIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~~~--------~--------- 456 (604)
T PRK10150 403 -----DKNHPSVVMWSIANEPASR----EQGAREYFAPLAELTRKLDPTRPVTCVNVMFATP--------D--------- 456 (604)
T ss_pred -----ccCCceEEEEeeccCCCcc----chhHHHHHHHHHHHHHhhCCCCceEEEecccCCc--------c---------
Confidence 9999999999999998753 2356788999999999999999999875321100 0
Q ss_pred hhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCC-------CCCCChHHHH
Q 013811 265 VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRK-------DPGYSTYQRD 337 (436)
Q Consensus 265 ~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~-------~~g~~~~~r~ 337 (436)
.....+.+||+++|.|+.++........ ...++...+....+..+||++++|||..+. ...++++.+.
T Consensus 457 -~~~~~~~~Dv~~~N~Y~~wy~~~~~~~~----~~~~~~~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~ 531 (604)
T PRK10150 457 -TDTVSDLVDVLCLNRYYGWYVDSGDLET----AEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQC 531 (604)
T ss_pred -cccccCcccEEEEcccceecCCCCCHHH----HHHHHHHHHHHHHHhcCCCEEEEccCCccccccccCCCCCCCHHHHH
Confidence 0112356899999999874322112211 222333333222222589999999996542 1235678888
Q ss_pred HHHHHHHHHHHHHhhcCCCccceeecccccCCC----CCC-CCCceEEeC
Q 013811 338 VMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM----DAF-RDGYEIVLS 382 (436)
Q Consensus 338 ~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~----~~~-~dg~~i~~~ 382 (436)
.+++..+..+.+ .+.++|.++|++.|... ..+ ++..+++..
T Consensus 532 ~~~~~~~~~~~~----~p~~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~ 577 (604)
T PRK10150 532 AFLDMYHRVFDR----VPAVVGEQVWNFADFATSQGILRVGGNKKGIFTR 577 (604)
T ss_pred HHHHHHHHHHhc----CCceEEEEEEeeeccCCCCCCcccCCCcceeEcC
Confidence 888877665433 35899999999999422 112 245677765
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=196.98 Aligned_cols=158 Identities=17% Similarity=0.291 Sum_probs=113.5
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+|++++|.|||||++++|+|.|........+.+.+.++++|..||++|+|+||+.... .+
T Consensus 1 vev~~~~~~lNGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p-------------~~------ 61 (298)
T PF02836_consen 1 VEVKDGGFYLNGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYP-------------PS------ 61 (298)
T ss_dssp EEEETTEEEETTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS---------------S------
T ss_pred CEEECCEEEECCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEccccc-------------Cc------
Confidence 68999999999999999999976433322223456899999999999999999994431 12
Q ss_pred HHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 113 LDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
.++++.|.++||.|+..+... .+|. |. ..+ .......++...+.+.+.++++|.| ++|
T Consensus 62 -~~~~~~cD~~GilV~~e~~~~--~~~~------~~-~~~----~~~~~~~~~~~~~~~~~~~~~~v~~--------~~N 119 (298)
T PF02836_consen 62 -PRFYDLCDELGILVWQEIPLE--GHGS------WQ-DFG----NCNYDADDPEFRENAEQELREMVRR--------DRN 119 (298)
T ss_dssp -HHHHHHHHHHT-EEEEE-S-B--SCTS------SS-STS----CTSCTTTSGGHHHHHHHHHHHHHHH--------HTT
T ss_pred -HHHHHHHhhcCCEEEEecccc--ccCc------cc-cCC----ccccCCCCHHHHHHHHHHHHHHHHc--------CcC
Confidence 378899999999999887431 0010 00 000 0012345788999999999999999 999
Q ss_pred CCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCC
Q 013811 193 DPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
||+|++|.++||+ ....+++++.+.+|++||+++|+..+
T Consensus 120 HPSIi~W~~gNE~---------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 120 HPSIIMWSLGNES---------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp -TTEEEEEEEESS---------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred cCchheeecCccC---------ccccchhHHHHHHHhcCCCCceeecc
Confidence 9999999999999 35778899999999999999998765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=189.75 Aligned_cols=282 Identities=17% Similarity=0.241 Sum_probs=189.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++||+.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|++|.++||.+|++|+++ + .|
T Consensus 53 y~~y~eDi~l~~~~G~~~~R~si----~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hf-d-------~P 120 (427)
T TIGR03356 53 YHRYEEDVALMKELGVDAYRFSI----AWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHW-D-------LP 120 (427)
T ss_pred HHhHHHHHHHHHHcCCCeEEccc----chhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccC-C-------cc
Confidence 47899999999999999999843 48889887 788999999999999999999999999999864 2 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------C----Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------P----SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~----~~ 213 (436)
.|....|. |.+++..+.|.+|++.+++| |++. |-.|++.|||+.... + +.
T Consensus 121 ~~l~~~gG--------w~~~~~~~~f~~ya~~~~~~--------~~d~--v~~w~t~NEp~~~~~~~y~~G~~~P~~~~~ 182 (427)
T TIGR03356 121 QALEDRGG--------WLNRDTAEWFAEYAAVVAER--------LGDR--VKHWITLNEPWCSAFLGYGLGVHAPGLRDL 182 (427)
T ss_pred HHHHhcCC--------CCChHHHHHHHHHHHHHHHH--------hCCc--CCEEEEecCcceecccchhhccCCCCCccH
Confidence 56543332 67899999999999999999 9995 557999999985421 1 11
Q ss_pred H-HHHH------HHHHHHHHhhccCCCCEEEeCCC--cccCCC-CCcc-------------ccCCCCCcccchhh----h
Q 013811 214 R-TIQA------WITEMASYVKSIDRNHLLEAGLE--GFYGQS-TPQR-------------KRVNPNLDIGTDFV----A 266 (436)
Q Consensus 214 ~-~~~~------w~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~-~~~~-------------~~~np~~~~g~df~----~ 266 (436)
. .++. -..++++.+|+..|+..|.+-.. .++..+ .+.. +..+|.+ .| ++. .
T Consensus 183 ~~~~~~~hnll~Aha~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d~~~-~G-~yP~~~~~ 260 (427)
T TIGR03356 183 RAALQAAHHLLLAHGLAVQALRANGPGAQVGIVLNLTPVYPASDSPEDVAAARRADGLLNRWFLDPLL-KG-RYPEDLLE 260 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeeeCCCCHHHHHHHHHHHHHHhhhhhHHHh-CC-CCCHHHHH
Confidence 1 1111 12445677888888766654222 222221 1100 0001100 00 000 0
Q ss_pred -------------hcCCCCcceEEeecCCCCCCCC------------CChh-H--hHHHHHHHHHHHHHHHHHhcCC-cE
Q 013811 267 -------------NNLIPGIDFATVHSYPDQWLSS------------SNDR-D--QLSFLNNWLDTHIQDAEHILRK-PI 317 (436)
Q Consensus 267 -------------~~~~~~iD~~s~H~Y~~~w~~~------------~~~~-~--~~~~~~~~i~~~~~~a~~~~~k-Pv 317 (436)
......+||+++++|....... ...+ . .......-|+..+....+.+++ ||
T Consensus 261 ~l~~~p~~~~~d~~~l~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~rY~~ppi 340 (427)
T TIGR03356 261 YLGDAPFVQDGDLETIAQPLDFLGINYYTRSVVAADPGTGAGFVEVPEGVPKTAMGWEVYPEGLYDLLLRLKEDYPGPPI 340 (427)
T ss_pred HhccCCCCCHHHHHHhcCCCCEEEEeccccceeccCCCCCCCccccCCCCCcCCCCCeechHHHHHHHHHHHHhcCCCCE
Confidence 0113567999999997432110 0000 0 0111233455556555555787 79
Q ss_pred EEEecCCCCCC---CC-CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 318 LLAEFGKSRKD---PG-YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 318 ~i~EfG~~~~~---~g-~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
+|+|.|+...+ .| ..++.|..|++..+..+.+++.+|..+.|++.|++.|+- +|.+| |++++.
T Consensus 341 ~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--ew~~gy~~rfGl~~V 411 (427)
T TIGR03356 341 YITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDNF--EWAEGYSKRFGLVHV 411 (427)
T ss_pred EEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEeccccccc--chhcccccccceEEE
Confidence 99999997432 11 346789999999999999999999999999999999984 46555 555554
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=206.75 Aligned_cols=234 Identities=20% Similarity=0.277 Sum_probs=159.0
Q ss_pred CCCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCC
Q 013811 28 AGDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSY 105 (436)
Q Consensus 28 ~~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~ 105 (436)
...|| |+++++.|.+||+|++++|+|.|........+.+++.++++|+.||++|+|+||++....
T Consensus 313 ~~~GfR~iei~~~~f~lNGkpi~lrGvnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~sHyP~------------- 379 (1021)
T PRK10340 313 QRVGFRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPN------------- 379 (1021)
T ss_pred eeeEEEEEEEECCEEEECCEEEEEEEeecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEecCCCC-------------
Confidence 34576 788899999999999999999875443322234568899999999999999999954211
Q ss_pred ChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 106 NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 106 ~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
+ ..++++|.++||+|+-... .+ . .|... .+ ....+..+|...+.+.+.++.+|.|
T Consensus 380 ~-------~~fydlcDe~GllV~dE~~-~e-~-~g~~~-------~~----~~~~~~~~p~~~~~~~~~~~~mV~R---- 434 (1021)
T PRK10340 380 D-------PRFYELCDIYGLFVMAETD-VE-S-HGFAN-------VG----DISRITDDPQWEKVYVDRIVRHIHA---- 434 (1021)
T ss_pred C-------HHHHHHHHHCCCEEEECCc-cc-c-cCccc-------cc----ccccccCCHHHHHHHHHHHHHHHHh----
Confidence 1 2678999999999987652 11 0 01000 00 0012245677888899999999999
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~ 265 (436)
++|||+|++|.++||.... .. +++|++.+|++||++||+.....
T Consensus 435 ----drNHPSIi~WslGNE~~~g-----~~----~~~~~~~~k~~DptR~v~~~~~~----------------------- 478 (1021)
T PRK10340 435 ----QKNHPSIIIWSLGNESGYG-----CN----IRAMYHAAKALDDTRLVHYEEDR----------------------- 478 (1021)
T ss_pred ----CCCCCEEEEEECccCcccc-----HH----HHHHHHHHHHhCCCceEEeCCCc-----------------------
Confidence 9999999999999998642 12 37899999999999999754210
Q ss_pred hhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHH
Q 013811 266 ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVY 344 (436)
Q Consensus 266 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~ 344 (436)
.....|+++. +|+.. . .+..+ .....+||++++|||..... +| ...+|..
T Consensus 479 ---~~~~~Dv~~~-~Y~~~-----------~----~~~~~---~~~~~~kP~i~~Ey~hamgn~~g----~~~~yw~--- 529 (1021)
T PRK10340 479 ---DAEVVDVIST-MYTRV-----------E----LMNEF---GEYPHPKPRILCEYAHAMGNGPG----GLTEYQN--- 529 (1021)
T ss_pred ---Cccccceecc-ccCCH-----------H----HHHHH---HhCCCCCcEEEEchHhccCCCCC----CHHHHHH---
Confidence 0135788885 35421 1 12221 11113799999999965432 22 1233332
Q ss_pred HHHHHHhhcCCCccceeecccccCC
Q 013811 345 YKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 345 ~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+.+ .+.+.|.++|.|.|.+
T Consensus 530 -~~~~----~p~l~GgfiW~~~D~~ 549 (1021)
T PRK10340 530 -VFYK----HDCIQGHYVWEWCDHG 549 (1021)
T ss_pred -HHHh----CCceeEEeeeecCccc
Confidence 2222 3578999999999974
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-20 Score=203.61 Aligned_cols=244 Identities=14% Similarity=0.212 Sum_probs=158.7
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||+|++++|+|.|..........+++.++++|+.||++|+|+||+.... .+
T Consensus 330 ~~GfR~iei~~~~f~LNGkpi~lrGvn~h~~~p~~G~a~t~e~~~~di~lmK~~g~NaVR~sHyP-------------~~ 396 (1027)
T PRK09525 330 DVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYP-------------NH 396 (1027)
T ss_pred eEEEEEEEEECCEEEECCEEEEEEEeEccccCcccCccCCHHHHHHHHHHHHHCCCCEEEecCCC-------------CC
Confidence 4566 78889999999999999999987543332223467899999999999999999994321 11
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
.++.++|.++||+|+-...- . .. |+ ++ ......+|...+.+.+.++++|.|
T Consensus 397 -------p~fydlcDe~GilV~dE~~~-e-~h-g~--~~------------~~~~~~dp~~~~~~~~~~~~mV~R----- 447 (1027)
T PRK09525 397 -------PLWYELCDRYGLYVVDEANI-E-TH-GM--VP------------MNRLSDDPRWLPAMSERVTRMVQR----- 447 (1027)
T ss_pred -------HHHHHHHHHcCCEEEEecCc-c-cc-CC--cc------------ccCCCCCHHHHHHHHHHHHHHHHh-----
Confidence 26789999999999876421 1 00 11 00 012345788889999999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
++|||+|++|.++||+.... . ..+|++.+|++||+++|+..+.+. .
T Consensus 448 ---drNHPSIi~WSlgNE~~~g~-----~----~~~l~~~~k~~DptRpV~y~~~~~-~--------------------- 493 (1027)
T PRK09525 448 ---DRNHPSIIIWSLGNESGHGA-----N----HDALYRWIKSNDPSRPVQYEGGGA-D--------------------- 493 (1027)
T ss_pred ---CCCCCEEEEEeCccCCCcCh-----h----HHHHHHHHHhhCCCCcEEECCCCC-C---------------------
Confidence 99999999999999986531 1 468899999999999998643110 0
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~ 346 (436)
....|+++. +|+...............+.+|+.. . ..+||++++|||-.... +...-.+| ++.
T Consensus 494 ---~~~~Dv~~~-my~~~~~~~~~~~~~~~~~~~~~~~----~--~~~kP~i~cEY~Hamgn---~~g~l~~y----w~~ 556 (1027)
T PRK09525 494 ---TAATDIICP-MYARVDEDQPFPAVPKWSIKKWISL----P--GETRPLILCEYAHAMGN---SLGGFAKY----WQA 556 (1027)
T ss_pred ---CCccccccC-CCCCccccccccccchHHHHHHHhc----C--CCCCCEEEEechhcccC---cCccHHHH----HHH
Confidence 123455553 3432111000000000112223221 0 13699999999965432 21222233 333
Q ss_pred HHHHhhcCCCccceeecccccCC
Q 013811 347 IYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 347 i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+. +...+.|.++|.|.|+|
T Consensus 557 ~~----~~~~~~GgfIW~w~Dqg 575 (1027)
T PRK09525 557 FR----QYPRLQGGFIWDWVDQG 575 (1027)
T ss_pred Hh----cCCCeeEEeeEeccCcc
Confidence 32 23578999999999976
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=188.99 Aligned_cols=284 Identities=21% Similarity=0.324 Sum_probs=157.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
+++.+++||+.|+++|+|+||+..+ .|..+||++|.|| |..||++|+.|+++||+|+|.+... ..|
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~---~W~~lEP~eG~yd---F~~lD~~l~~a~~~Gi~viL~~~~~--------~~P 73 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEF---SWSWLEPEEGQYD---FSWLDRVLDLAAKHGIKVILGTPTA--------APP 73 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CC---EHHHH-SBTTB------HHHHHHHHHHHCTT-EEEEEECTT--------TS-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEe---chhhccCCCCeee---cHHHHHHHHHHHhccCeEEEEeccc--------ccc
Confidence 4578999999999999999998655 3667899999999 8889999999999999999987532 235
Q ss_pred hHHhhc----------CCCC---CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-
Q 013811 146 NWARSQ----------GQFL---TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP- 211 (436)
Q Consensus 146 ~W~~~~----------G~~~---~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~- 211 (436)
.|.... |... ......+.+|..++.+.++++.+++| |+++|+|++|+|.|||.+..+.
T Consensus 74 ~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~--------y~~~p~vi~~~i~NE~~~~~~~~ 145 (374)
T PF02449_consen 74 AWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAER--------YGDHPAVIGWQIDNEPGYHRCYS 145 (374)
T ss_dssp HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHH--------HTTTTTEEEEEECCSTTCTS--S
T ss_pred cchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhh--------ccccceEEEEEeccccCcCcCCC
Confidence 565421 1100 01122356789999999999999999 9999999999999999774220
Q ss_pred --------------------------------------------------C-----------hHHHHHHHHHHHHHhhcc
Q 013811 212 --------------------------------------------------S-----------GRTIQAWITEMASYVKSI 230 (436)
Q Consensus 212 --------------------------------------------------~-----------~~~~~~w~~~~~~~Ir~~ 230 (436)
+ .+.+.++++.+++.||+.
T Consensus 146 ~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~ 225 (374)
T PF02449_consen 146 PACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIREY 225 (374)
T ss_dssp HHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 135666778889999999
Q ss_pred CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCC-CCCCCChhHhHHHHHHHHHHHHHHH
Q 013811 231 DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQ-WLSSSNDRDQLSFLNNWLDTHIQDA 309 (436)
Q Consensus 231 Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~-w~~~~~~~~~~~~~~~~i~~~~~~a 309 (436)
+|+++|++...+... .+.|+.. ....+|+++++.||.. +...........+..+.++.
T Consensus 226 ~p~~~vt~n~~~~~~--------------~~~d~~~--~a~~~D~~~~d~Y~~~~~~~~~~~~~~~a~~~dl~R~----- 284 (374)
T PF02449_consen 226 DPDHPVTTNFMGSWF--------------NGIDYFK--WAKYLDVVSWDSYPDGSFDFYDDDPYSLAFNHDLMRS----- 284 (374)
T ss_dssp STT-EEE-EE-TT-----------------SS-HHH--HGGGSSSEEEEE-HHHHHTTTT--TTHHHHHHHHHHH-----
T ss_pred CCCceEEeCcccccc--------------CcCCHHH--HHhhCCcceeccccCcccCCCCCCHHHHHHHHHHHHh-----
Confidence 999999975433200 1123322 2457999999999871 11111111112222222221
Q ss_pred HHhcCCcEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC--CCCCCCCCceEEeCCC-c
Q 013811 310 EHILRKPILLAEFGKSRKDP-GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE--GMDAFRDGYEIVLSQS-P 385 (436)
Q Consensus 310 ~~~~~kPv~i~EfG~~~~~~-g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~--g~~~~~dg~~i~~~~d-~ 385 (436)
.+ .+||.++.|.-.....- ......+...++... +.++.. +..|.+||+|... |.+. -.++|+.-++ +
T Consensus 285 ~~-~~kpf~v~E~~~g~~~~~~~~~~~~pg~~~~~~---~~~~A~--Ga~~i~~~~wr~~~~g~E~--~~~g~~~~dg~~ 356 (374)
T PF02449_consen 285 LA-KGKPFWVMEQQPGPVNWRPYNRPPRPGELRLWS---WQAIAH--GADGILFWQWRQSRFGAEQ--FHGGLVDHDGRE 356 (374)
T ss_dssp HT-TT--EEEEEE--S--SSSSS-----TTHHHHHH---HHHHHT--T-S-EEEC-SB--SSSTTT--TS--SB-TTS--
T ss_pred hc-CCCceEeecCCCCCCCCccCCCCCCCCHHHHHH---HHHHHH--hCCeeEeeeccCCCCCchh--hhcccCCccCCC
Confidence 12 69999999994431110 001111112222222 222222 6779999999764 2222 2356776555 2
Q ss_pred --CHHHHHHHHHHHHHh
Q 013811 386 --STANVITQQAHKLYQ 400 (436)
Q Consensus 386 --~~~~li~~~~~~~~~ 400 (436)
.+..-+.+..++|+.
T Consensus 357 ~~~~~~e~~~~~~~l~~ 373 (374)
T PF02449_consen 357 PTRRYREVAQLGRELKK 373 (374)
T ss_dssp B-HHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHhc
Confidence 223344444454443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-19 Score=183.12 Aligned_cols=284 Identities=15% Similarity=0.220 Sum_probs=186.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.||++|+|+.|+ .. .|++++|. .|.+|++.++.++++|+++.++||..+++|++ |+ .|
T Consensus 81 Yhry~EDi~lmk~lG~~~YRf-SI---sWsRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H-~d-------lP 148 (497)
T PLN02998 81 YHKYKEDVKLMADMGLEAYRF-SI---SWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHH-FD-------LP 148 (497)
T ss_pred HHhhHHHHHHHHHcCCCeEEe-ec---cHHhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecC-CC-------CC
Confidence 578999999999999999998 32 48888884 57799999999999999999999999999986 43 35
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------CChH--
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------PSGR-- 214 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~~~~-- 214 (436)
.|.... |+ |.+++..+.|.+|++.+++| |+|. |-.|...|||++... +.+.
T Consensus 149 ~~L~~~yGG--------W~n~~~v~~F~~YA~~~~~~--------fgdr--Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~ 210 (497)
T PLN02998 149 QALEDEYGG--------WLSQEIVRDFTAYADTCFKE--------FGDR--VSHWTTINEVNVFALGGYDQGITPPARCS 210 (497)
T ss_pred HHHHHhhCC--------cCCchHHHHHHHHHHHHHHH--------hcCc--CCEEEEccCcchhhhcchhhcccCCCccc
Confidence 666543 43 78899999999999999999 9995 568999999996531 1110
Q ss_pred ---------------HHHHHH------HHHHHHhhcc---CCCCEEEeCCC--cccCCC-CCcc-------------ccC
Q 013811 215 ---------------TIQAWI------TEMASYVKSI---DRNHLLEAGLE--GFYGQS-TPQR-------------KRV 254 (436)
Q Consensus 215 ---------------~~~~w~------~~~~~~Ir~~---Dp~~lV~vG~~--g~~~~~-~~~~-------------~~~ 254 (436)
.++.-. .++.+.+|+. +++..|.+-.. .++..+ .+.. +..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~ 290 (497)
T PLN02998 211 PPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYKYKQHGSVGISVYTYGAVPLTNSVKDKQATARVNDFYIGWIL 290 (497)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEEeCCeeecCCCCHHHHHHHHHHHHHHhhhhh
Confidence 112221 2345667765 55555543222 222211 0100 000
Q ss_pred CCC----Cc-ccc--------hhh---hhcCCCCcceEEeecCCCCCCCC---C--C--h--------h----------H
Q 013811 255 NPN----LD-IGT--------DFV---ANNLIPGIDFATVHSYPDQWLSS---S--N--D--------R----------D 293 (436)
Q Consensus 255 np~----~~-~g~--------df~---~~~~~~~iD~~s~H~Y~~~w~~~---~--~--~--------~----------~ 293 (436)
.|. |- ... +|. .......+||+++++|....... . . . . .
T Consensus 291 dp~~~G~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (497)
T PLN02998 291 HPLVFGDYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMALYVKDNSSSLKPNLQDFNTDIAVEMTLVGNTSIEN 370 (497)
T ss_pred hHHhCCCcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEchhcCcccccCCCcCCCCccccccccccccccCCCcCCCC
Confidence 110 00 000 000 01113467999999995432110 0 0 0 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-cEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCC
Q 013811 294 QLSFLNNWLDTHIQDAEHILRK-PILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD 371 (436)
Q Consensus 294 ~~~~~~~~i~~~~~~a~~~~~k-Pv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~ 371 (436)
..+...+-|+..+....+.+++ ||+|+|.|+.... ....+..|.+|++..+..+..++.+|..+.|++.|++.|+.
T Consensus 371 ~w~i~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WSl~Dnf-- 448 (497)
T PLN02998 371 EYANTPWSLQQILLYVKETYGNPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWSLMDVF-- 448 (497)
T ss_pred CCEEChHHHHHHHHHHHHHcCCCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh--
Confidence 0111233455555555555787 6999999997542 22456789999999999999999999999999999999984
Q ss_pred CCCCC----ceEEeC
Q 013811 372 AFRDG----YEIVLS 382 (436)
Q Consensus 372 ~~~dg----~~i~~~ 382 (436)
+|.+| |++++.
T Consensus 449 EW~~Gy~~RfGLv~V 463 (497)
T PLN02998 449 ELFGGYERSFGLLYV 463 (497)
T ss_pred chhccccCccceEEE
Confidence 46554 566664
|
|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-18 Score=176.43 Aligned_cols=284 Identities=15% Similarity=0.202 Sum_probs=186.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.||++|+|+.|+ .. .|++++|. +|.+|+++++.++++|+++.++||..++||++ |+ .|
T Consensus 76 Yhry~EDI~L~k~lG~~ayRf-SI---sWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H-~d-------lP 143 (504)
T PLN02814 76 YHKYKEDVKLMAEMGLESFRF-SI---SWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYH-YD-------LP 143 (504)
T ss_pred HHhhHHHHHHHHHcCCCEEEE-ec---cHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecC-CC-------CC
Confidence 578999999999999999998 32 48888884 67899999999999999999999999999986 43 36
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------C---C-
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------P---S- 212 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~---~- 212 (436)
.|.... |+ |.+++..+.|.+|++.++++ |+|. |-.|...|||++... + +
T Consensus 144 ~~L~~~yGG--------W~n~~~i~~F~~YA~~~f~~--------fgdr--Vk~WiT~NEP~~~~~~gy~~G~~pg~~~~ 205 (504)
T PLN02814 144 QSLEDEYGG--------WINRKIIEDFTAFADVCFRE--------FGED--VKLWTTINEATIFAIGSYGQGIRYGHCSP 205 (504)
T ss_pred HHHHHhcCC--------cCChhHHHHHHHHHHHHHHH--------hCCc--CCEEEeccccchhhhcccccCcCCCCCCc
Confidence 676653 43 78999999999999999999 9995 668999999985421 0 0
Q ss_pred ------------hHHHHHH------HHHHHHHhhcc---CCCCEEEeCCC--cccCCCC-Cc-------------cccCC
Q 013811 213 ------------GRTIQAW------ITEMASYVKSI---DRNHLLEAGLE--GFYGQST-PQ-------------RKRVN 255 (436)
Q Consensus 213 ------------~~~~~~w------~~~~~~~Ir~~---Dp~~lV~vG~~--g~~~~~~-~~-------------~~~~n 255 (436)
.+.++.- ..++++++|+. .|+-.|.+-.. .++..+. ++ ++..+
T Consensus 206 ~~~~~~~~~~~~~~~~~a~hn~llAHa~Av~~~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~~~~~~f~d 285 (504)
T PLN02814 206 NKFINCSTGNSCTETYIAGHNMLLAHASASNLYKLKYKSKQRGSIGLSIFAFGLSPYTNSKDDEIATQRAKAFLYGWMLK 285 (504)
T ss_pred ccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCceeecCCCCHHHHHHHHHHHHHhhhhhhH
Confidence 0112221 13345667764 56555543221 1222111 10 00001
Q ss_pred CC----Cc-ccch--------hh---hhcCCCCcceEEeecCCCCCCCC---C--------Ch------------hH---
Q 013811 256 PN----LD-IGTD--------FV---ANNLIPGIDFATVHSYPDQWLSS---S--------ND------------RD--- 293 (436)
Q Consensus 256 p~----~~-~g~d--------f~---~~~~~~~iD~~s~H~Y~~~w~~~---~--------~~------------~~--- 293 (436)
|. |- ...+ |. .......+||+++++|....... . .. +.
T Consensus 286 p~~~G~YP~~~~~~l~~~lp~~~~~d~~~ikg~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (504)
T PLN02814 286 PLVFGDYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVGIIHYTTFYVTNRPAPSIFPSMNEGFFTDMGAYIISAGNSSFF 365 (504)
T ss_pred HHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEcccccceeccCCCCCcccccCCCcccccccccCCCCCcCCC
Confidence 10 00 0000 00 00112567999999995322110 0 00 00
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-cEEEEecCCCCCCCC-CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCC
Q 013811 294 QLSFLNNWLDTHIQDAEHILRK-PILLAEFGKSRKDPG-YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD 371 (436)
Q Consensus 294 ~~~~~~~~i~~~~~~a~~~~~k-Pv~i~EfG~~~~~~g-~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~ 371 (436)
..+...+-|+..+....+.+++ ||+|+|.|+.....+ ..+..|..|+++.+..+.+++.+|..+.|++.|++.|+.
T Consensus 366 gWei~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WSllDnf-- 443 (504)
T PLN02814 366 EFDATPWGLEGILEHIKQSYNNPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWSMIDLY-- 443 (504)
T ss_pred CCeECcHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh--
Confidence 0011233355555555444766 799999999754322 456899999999999999999999999999999999984
Q ss_pred CCCCC----ceEEeC
Q 013811 372 AFRDG----YEIVLS 382 (436)
Q Consensus 372 ~~~dg----~~i~~~ 382 (436)
+|.+| |++++.
T Consensus 444 EW~~Gy~~RfGLvyV 458 (504)
T PLN02814 444 ELLGGYTTSFGMYYV 458 (504)
T ss_pred chhccccCccceEEE
Confidence 46554 566654
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=179.61 Aligned_cols=284 Identities=17% Similarity=0.227 Sum_probs=189.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++|++.||++|+|+.|+ .. .|++++|. +|.+|++.++.++++|+++.++||..+++|++ |+ .
T Consensus 72 Yhry~eDi~Lm~~lG~~aYRf-SI---sWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H-~d-------l 139 (478)
T PRK09593 72 YHHYKEDIALFAEMGFKTYRM-SI---AWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITH-FD-------C 139 (478)
T ss_pred HHhhHHHHHHHHHcCCCEEEE-ec---chhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecc-cC-------C
Confidence 478999999999999999998 33 48889886 55689999999999999999999999999986 43 3
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC----------CCh
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD----------PSG 213 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~----------~~~ 213 (436)
|.|.... |+ |.+++..+.|.+|++.+++| |++. |-.|...|||++... +.+
T Consensus 140 P~~L~~~~GG--------W~n~~~v~~F~~YA~~~~~~--------fgdr--Vk~WiT~NEP~~~~~~~~~~~g~~~~~g 201 (478)
T PRK09593 140 PMHLIEEYGG--------WRNRKMVGFYERLCRTLFTR--------YKGL--VKYWLTFNEINMILHAPFMGAGLYFEEG 201 (478)
T ss_pred CHHHHhhcCC--------CCChHHHHHHHHHHHHHHHH--------hcCc--CCEEEeecchhhhhcccccccCcccCCC
Confidence 5666543 33 78899999999999999999 9995 568999999985321 111
Q ss_pred -----HHHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccCCC-CCcc------------ccCCCC----Cc-ccc
Q 013811 214 -----RTIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYGQS-TPQR------------KRVNPN----LD-IGT 262 (436)
Q Consensus 214 -----~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~-~~~~------------~~~np~----~~-~g~ 262 (436)
..++.- ...+++.+|+..|+-.|.+-... ++..+ .++. +..+|. |- ...
T Consensus 202 ~~~~~~~~~a~h~~llAHa~A~~~~~~~~~~g~VGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~fld~~~~G~YP~~~~ 281 (478)
T PRK09593 202 ENKEQVKYQAAHHELVASAIATKIAHEVDPENKVGCMLAAGQYYPNTCHPEDVWAAMKEDRENYFFIDVQARGEYPNYAK 281 (478)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeEeCCCCHHHHHHHHHHHHHhhhhhhhhhCCCccHHHH
Confidence 011222 23446778888887655543222 22211 1100 000110 00 000
Q ss_pred h----------hh----hhcCCCCcceEEeecCCCCCCCC-----C----C----h--h---H---hHHHHHHHHHHHHH
Q 013811 263 D----------FV----ANNLIPGIDFATVHSYPDQWLSS-----S----N----D--R---D---QLSFLNNWLDTHIQ 307 (436)
Q Consensus 263 d----------f~----~~~~~~~iD~~s~H~Y~~~w~~~-----~----~----~--~---~---~~~~~~~~i~~~~~ 307 (436)
+ |. .......+||+++++|-...... . . . + . ..+...+-|+..+.
T Consensus 282 ~~~~~~~~~~~~~~~d~~~ik~g~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~gw~i~P~Gl~~~l~ 361 (478)
T PRK09593 282 KRFEREGITIEMTEEDLELLKENTVDFISFSYYSSRVASGDPKVNEKTAGNIFASLKNPYLKASEWGWQIDPLGLRITLN 361 (478)
T ss_pred HHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCCCCccccccCCCcccCCCCCEECHHHHHHHHH
Confidence 0 00 00113567999999996432210 0 0 0 0 0 01122344555565
Q ss_pred HHHHhcCCcEEEEecCCCCCC----CC-CChHHHHHHHHHHHHHHHHHhh-cCCCccceeecccccCCCCCCCCC-----
Q 013811 308 DAEHILRKPILLAEFGKSRKD----PG-YSTYQRDVMFNTVYYKIYSSAK-RGGAAAGGLFWQLLTEGMDAFRDG----- 376 (436)
Q Consensus 308 ~a~~~~~kPv~i~EfG~~~~~----~g-~~~~~r~~~~~~~~~~i~~~~~-~~~~~~G~~~W~~~~~g~~~~~dg----- 376 (436)
...+.+++||+|+|.|+...+ .| ..+..|..|++..+..+..++. +|..+.|++.|++.|+. +|..|
T Consensus 362 ~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~--EW~~G~y~~R 439 (478)
T PRK09593 362 TIWDRYQKPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAINEDGVELLGYTTWGCIDLV--SAGTGEMKKR 439 (478)
T ss_pred HHHHHcCCCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchHhh--cccCCCccCe
Confidence 555558899999999997432 11 3467899999999999999985 88899999999999984 47666
Q ss_pred ceEEeC
Q 013811 377 YEIVLS 382 (436)
Q Consensus 377 ~~i~~~ 382 (436)
|+++..
T Consensus 440 fGl~~V 445 (478)
T PRK09593 440 YGFIYV 445 (478)
T ss_pred eceEEE
Confidence 677664
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-18 Score=176.02 Aligned_cols=284 Identities=15% Similarity=0.203 Sum_probs=186.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.||++|+|+.|+ .. .|++++|. .|.+|++.++.++.+|+++.++||..+++|++ |+ .|
T Consensus 78 YhrY~eDI~Lm~~lG~~aYRf-SI---sWsRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H-~d-------lP 145 (503)
T PLN02849 78 YHKYKEDVKLMVETGLDAFRF-SI---SWSRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFH-YD-------HP 145 (503)
T ss_pred HHhHHHHHHHHHHcCCCeEEE-ec---cHHhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecC-CC-------Cc
Confidence 578999999999999999998 33 48888885 46799999999999999999999999999986 43 36
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------CCh---
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------PSG--- 213 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~~~--- 213 (436)
.|.... |+ |.|++..+.|.+|++.++++ |+|. |-.|...|||++... +.+
T Consensus 146 ~~L~~~yGG--------W~nr~~v~~F~~YA~~~f~~--------fgDr--Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~ 207 (503)
T PLN02849 146 QYLEDDYGG--------WINRRIIKDFTAYADVCFRE--------FGNH--VKFWTTINEANIFTIGGYNDGITPPGRCS 207 (503)
T ss_pred HHHHHhcCC--------cCCchHHHHHHHHHHHHHHH--------hcCc--CCEEEEecchhhhhhchhhhccCCCCccc
Confidence 666653 43 78999999999999999999 9995 568999999986421 100
Q ss_pred -------------HHHHHH------HHHHHHHhhcc---CCCCEEEeCCC--cccCCC-CCcc-------------ccCC
Q 013811 214 -------------RTIQAW------ITEMASYVKSI---DRNHLLEAGLE--GFYGQS-TPQR-------------KRVN 255 (436)
Q Consensus 214 -------------~~~~~w------~~~~~~~Ir~~---Dp~~lV~vG~~--g~~~~~-~~~~-------------~~~n 255 (436)
+.++.- ..++++.+|+. .|+..|.+-.. .++..+ .+.. +..+
T Consensus 208 ~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~D~~AA~~~~~~~~~~f~d 287 (503)
T PLN02849 208 SPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKDMQGGSIGFSLFALGFTPSTSSKDDDIATQRAKDFYLGWMLE 287 (503)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEEECceeecCCCCHHHHHHHHHHHHHhhhhhhH
Confidence 111221 13345667765 25555543221 122211 0100 0001
Q ss_pred CC----Cc-ccch--------hh---hhcCCCCcceEEeecCCCCCCCC----------CCh--------h-H---hHHH
Q 013811 256 PN----LD-IGTD--------FV---ANNLIPGIDFATVHSYPDQWLSS----------SND--------R-D---QLSF 297 (436)
Q Consensus 256 p~----~~-~g~d--------f~---~~~~~~~iD~~s~H~Y~~~w~~~----------~~~--------~-~---~~~~ 297 (436)
|. |- ...+ |. .......+||+++++|....... ... . . ..+.
T Consensus 288 p~~~G~YP~~~~~~l~~~lp~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i 367 (503)
T PLN02849 288 PLIFGDYPDEMKRTIGSRLPVFSKEESEQVKGSSDFIGVIHYLAASVTNIKIKPSLSGNPDFYSDMGVSLGKFSAFEYAV 367 (503)
T ss_pred HHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEeccchhhcccCCCCCCCCCCCccccccCCCCCccCCCCCeE
Confidence 10 00 0000 00 01113467999999995322110 000 0 0 0111
Q ss_pred HHHHHHHHHHHHHHhcCC-cEEEEecCCCCCC--C-CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCC
Q 013811 298 LNNWLDTHIQDAEHILRK-PILLAEFGKSRKD--P-GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~k-Pv~i~EfG~~~~~--~-g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~ 373 (436)
..+-|+..+....+.+++ ||+|+|.|+...+ . ...+..|..|++..+..+.+++.+|..+.|++.|++.|+. +|
T Consensus 368 ~P~Gl~~~L~~~~~rY~~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~Dnf--EW 445 (503)
T PLN02849 368 APWAMESVLEYIKQSYGNPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFMDLY--EL 445 (503)
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh--ch
Confidence 233355555554445787 7999999987532 1 1356789999999999999999999999999999999984 46
Q ss_pred CCC----ceEEeC
Q 013811 374 RDG----YEIVLS 382 (436)
Q Consensus 374 ~dg----~~i~~~ 382 (436)
..| |+++..
T Consensus 446 ~~Gy~~RfGLi~V 458 (503)
T PLN02849 446 LKGYEFSFGLYSV 458 (503)
T ss_pred hccccCccceEEE
Confidence 544 566664
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=177.47 Aligned_cols=282 Identities=16% Similarity=0.208 Sum_probs=189.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|+.|+ .. .|++++|. +|.+|++.++.++.+|+++.++||..+++|++ |+ .|
T Consensus 52 yhry~eDi~L~~~lG~~~yRf-SI---sWsRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H-~d-------lP 119 (467)
T TIGR01233 52 YHKYPVDLELAEEYGVNGIRI-SI---AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FD-------TP 119 (467)
T ss_pred hhhHHHHHHHHHHcCCCEEEE-ec---chhhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccC-CC-------Cc
Confidence 478999999999999999998 32 48888884 57899999999999999999999999999986 43 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------CCh----
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------PSG---- 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~~~---- 213 (436)
.|....|+ |.+++..+.|.+|++.++++ |++ |-.|...|||++... +.+
T Consensus 120 ~~L~~~GG--------W~n~~~v~~F~~YA~~~f~~--------fgd---Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~ 180 (467)
T TIGR01233 120 EALHSNGD--------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 180 (467)
T ss_pred HHHHHcCC--------CCCHHHHHHHHHHHHHHHHH--------hCC---CCEEEEecchhhhhhccchhcccCCCccch
Confidence 67665453 88999999999999999999 983 678999999986421 111
Q ss_pred --HHHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccCCC--CCc-------------cccCCCCCccc------c
Q 013811 214 --RTIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYGQS--TPQ-------------RKRVNPNLDIG------T 262 (436)
Q Consensus 214 --~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~--~~~-------------~~~~np~~~~g------~ 262 (436)
..++.. ..++++.+|+.+|+..|.+-... ++..+ .+. .+-.+|.+ .| .
T Consensus 181 ~~~~~~a~hn~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~~D~~aA~~~~~~~~~~f~d~~~-~G~Yp~~~~ 259 (467)
T TIGR01233 181 LAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATY-LGHYSDKTM 259 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceeEECCCCCHHHHHHHHHHHHHhhhcccchhh-CCCCCHHHH
Confidence 111222 23456778888887666543322 22221 111 00112210 00 0
Q ss_pred h--------------hh----hhcC--CCCcceEEeecCCCCCCCC----------------------C---------Ch
Q 013811 263 D--------------FV----ANNL--IPGIDFATVHSYPDQWLSS----------------------S---------ND 291 (436)
Q Consensus 263 d--------------f~----~~~~--~~~iD~~s~H~Y~~~w~~~----------------------~---------~~ 291 (436)
. +. .... ...+||+++++|-...... . ..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~DFlGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (467)
T TIGR01233 260 EGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYV 339 (467)
T ss_pred HHHHhhhhccCCCCCCCHHHHHHHhccCCCCCEEEEccccceeeccCCCccccccCCccccCcccccCCCcccccCCCCC
Confidence 0 00 0000 2467999999995321100 0 00
Q ss_pred h-H--hHHHHHHHHHHHHHHHHHhcCC--cEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceee
Q 013811 292 R-D--QLSFLNNWLDTHIQDAEHILRK--PILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLF 362 (436)
Q Consensus 292 ~-~--~~~~~~~~i~~~~~~a~~~~~k--Pv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~ 362 (436)
+ . ..+...+-|+..+....+.+++ ||+|+|.|+...+ ....+..|..|++..+..+.+++.+|..+.|++.
T Consensus 340 ~~t~~gw~i~P~Gl~~~L~~~~~~Y~~~ppi~ItENG~~~~d~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~ 419 (467)
T TIGR01233 340 PRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFI 419 (467)
T ss_pred CcCCCCCeeChHHHHHHHHHHHHHcCCCCCEEEeCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 0 0 0112234455556555555776 7999999997432 1134678999999999999999999999999999
Q ss_pred cccccCCCCCCCCC----ceEEeC
Q 013811 363 WQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 363 W~~~~~g~~~~~dg----~~i~~~ 382 (436)
|++.|+. +|..| |+++..
T Consensus 420 WSl~Dn~--Ew~~Gy~~RfGLv~V 441 (467)
T TIGR01233 420 WSLMDVF--SWSNGYEKRYGLFYV 441 (467)
T ss_pred ccchhhh--chhccccCccceEEE
Confidence 9999984 46544 666664
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=176.99 Aligned_cols=284 Identities=16% Similarity=0.170 Sum_probs=188.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
-+++++|++.||++|+|+.|+ .. .|++++|. .+.+|++.++.++++|+++.++||..+++|++ |+ .
T Consensus 66 Yhry~eDi~Lm~~lG~~~yRf-SI---sWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H-~d-------l 133 (476)
T PRK09589 66 YHRYKEDIALFAEMGFKCFRT-SI---AWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSH-FE-------M 133 (476)
T ss_pred HHhhHHHHHHHHHcCCCEEEe-cc---chhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC-------C
Confidence 478999999999999999998 32 48888885 45689999999999999999999999999986 43 3
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC------------C-
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS------------D- 210 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~------------~- 210 (436)
|.|.... |+ |.+++..+.|.+|++.++++ |+|. |-.|...|||++.. .
T Consensus 134 P~~L~~~yGG--------W~n~~~i~~F~~YA~~~f~~--------fgdr--Vk~WiT~NEp~~~~~~~~~~~~~~~~g~ 195 (476)
T PRK09589 134 PYHLVTEYGG--------WRNRKLIDFFVRFAEVVFTR--------YKDK--VKYWMTFNEINNQANFSEDFAPFTNSGI 195 (476)
T ss_pred CHHHHHhcCC--------cCChHHHHHHHHHHHHHHHH--------hcCC--CCEEEEecchhhhhccccccCCcccccc
Confidence 5666543 33 78899999999999999999 9995 66899999998531 0
Q ss_pred --CCh----H-HHHHHH------HHHHHHhhccCCCCEEEeCC--CcccCCC-CCc------------cccCCCC----C
Q 013811 211 --PSG----R-TIQAWI------TEMASYVKSIDRNHLLEAGL--EGFYGQS-TPQ------------RKRVNPN----L 258 (436)
Q Consensus 211 --~~~----~-~~~~w~------~~~~~~Ir~~Dp~~lV~vG~--~g~~~~~-~~~------------~~~~np~----~ 258 (436)
+.+ . .++.-. .++++++|+..|+..|.+-. ..++..+ .+. .+...|. |
T Consensus 196 ~~~pg~~~~~~~~~~~h~~llAha~A~~~~~~~~~~~~iG~~~~~~~~~P~~~~~~d~~aa~~~~~~~~~f~d~~~~G~Y 275 (476)
T PRK09589 196 LYSPGEDREQIMYQAAHYELVASALAVKTGHEINPDFQIGCMIAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHVRGYY 275 (476)
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeCCeeeeCCCCHHHHHHHHHHHHhccceecceeCCCC
Confidence 111 0 112221 33457788888876554322 1222211 110 0001111 0
Q ss_pred c-ccch----------hh----hhcCCCCcceEEeecCCCCCCCC----C------------Ch--hH---hHHHHHHHH
Q 013811 259 D-IGTD----------FV----ANNLIPGIDFATVHSYPDQWLSS----S------------ND--RD---QLSFLNNWL 302 (436)
Q Consensus 259 ~-~g~d----------f~----~~~~~~~iD~~s~H~Y~~~w~~~----~------------~~--~~---~~~~~~~~i 302 (436)
- ...+ |. .......+||+++++|....... . +. +. ..+...+-|
T Consensus 276 P~~~~~~~~~~~~~~~~t~~d~~~l~~g~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl 355 (476)
T PRK09589 276 PQHILNYFARKGFNLDITPEDNAILAEGCVDYIGFSYYMSFATKFHEDNPQLDYVETRDLVSNPYVKASEWGWQIDPAGL 355 (476)
T ss_pred cHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCcccccccccCCCcccCCCCCccCcHHH
Confidence 0 0000 00 00113567999999996533210 0 00 00 012223445
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCC----CC-CChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccCCCCCCCCC
Q 013811 303 DTHIQDAEHILRKPILLAEFGKSRKD----PG-YSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 303 ~~~~~~a~~~~~kPv~i~EfG~~~~~----~g-~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
+..+....+.+++||+|+|.|+...+ .+ ..+..|..|++..+..+..++ .+|..+.|++.|++.|+. +|.+|
T Consensus 356 ~~~L~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~V~GY~~WSl~Dn~--Ew~~G 433 (476)
T PRK09589 356 RYSLNWFWDHYQLPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKAVVEDGVDLMGYTPWGCIDLV--SAGTG 433 (476)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccccccc--cccCC
Confidence 55565555558999999999997432 11 346789999999999999998 789999999999999984 46665
Q ss_pred -----ceEEeC
Q 013811 377 -----YEIVLS 382 (436)
Q Consensus 377 -----~~i~~~ 382 (436)
|++++.
T Consensus 434 ~y~~RfGlv~V 444 (476)
T PRK09589 434 EMKKRYGFIYV 444 (476)
T ss_pred ccccceeeEEE
Confidence 566653
|
|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=178.14 Aligned_cols=283 Identities=15% Similarity=0.215 Sum_probs=186.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+++++|++.||++|+|+.|+ .. .|++++|. +|.+|++.++.++++|+++.++||..+++|++ |+ .|
T Consensus 53 Y~ry~eDi~L~~~lG~~~yRf-SI---sWsRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H-~d-------lP 120 (469)
T PRK13511 53 YHRYPEDLKLAEEFGVNGIRI-SI---AWSRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHH-FD-------TP 120 (469)
T ss_pred hhhhHHHHHHHHHhCCCEEEe-ec---cHhhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC-------Cc
Confidence 478999999999999999998 32 48888884 57799999999999999999999999999986 43 36
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------CCh----
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------PSG---- 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~~~---- 213 (436)
.|....|+ |.+++..+.|.+|++.+++| |+| |-.|...|||++... +.+
T Consensus 121 ~~L~~~GG--------W~n~~~v~~F~~YA~~~~~~--------fgd---Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~ 181 (469)
T PRK13511 121 EALHSNGD--------WLNRENIDHFVRYAEFCFEE--------FPE---VKYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181 (469)
T ss_pred HHHHHcCC--------CCCHHHHHHHHHHHHHHHHH--------hCC---CCEEEEccchhhhhhcchhhcccCCCCCcc
Confidence 67665443 78999999999999999999 998 668999999986531 111
Q ss_pred --HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCC--CCc-------------cccCCCC----Cc----c
Q 013811 214 --RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQS--TPQ-------------RKRVNPN----LD----I 260 (436)
Q Consensus 214 --~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~--~~~-------------~~~~np~----~~----~ 260 (436)
..++.- ..++++.+|+..++-.|.+-.. .++..+ .++ .+-.+|. |- .
T Consensus 182 ~~~~~~~~hn~llAHa~A~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~~~f~dp~~~G~Yp~~~~~ 261 (469)
T PRK13511 182 LAKVFQSHHNMMVAHARAVKLFKDKGYKGEIGVVHALPTKYPIDPDNPEDVRAAELEDIIHNKFILDATYLGYYSEETME 261 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceEeeCCCCCHHHHHHHHHHHHHhhhcccchhhCCCCCHHHHH
Confidence 111222 1344567888777655543222 222211 111 0011111 00 0
Q ss_pred ---------cc--hhhh----hcCC--CCcceEEeecCCCCCCCC------------C-------------------Chh
Q 013811 261 ---------GT--DFVA----NNLI--PGIDFATVHSYPDQWLSS------------S-------------------NDR 292 (436)
Q Consensus 261 ---------g~--df~~----~~~~--~~iD~~s~H~Y~~~w~~~------------~-------------------~~~ 292 (436)
|. .|.. .... ..+||+++++|....... . ..+
T Consensus 262 ~~~~~~~~~~~~l~~t~~d~~~ik~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (469)
T PRK13511 262 GVNHILEANGGSLDIRDEDFEILKAAKDLNDFLGINYYMSDWMRAYDGETEIIHNGTGEKGSSKYQLKGVGERVKPPDVP 341 (469)
T ss_pred HHHHhhhhcCCCCCCCHHHHHHHhcCCCCCCEEEechhhcceeecCCCccccccCCCCccccccccccCccccccCCCCC
Confidence 00 0000 0001 347999999996432100 0 000
Q ss_pred H-h--HHHHHHHHHHHHHHHHHhcCC--cEEEEecCCCCCCC-----CCChHHHHHHHHHHHHHHHHHhhcCCCccceee
Q 013811 293 D-Q--LSFLNNWLDTHIQDAEHILRK--PILLAEFGKSRKDP-----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLF 362 (436)
Q Consensus 293 ~-~--~~~~~~~i~~~~~~a~~~~~k--Pv~i~EfG~~~~~~-----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~ 362 (436)
. . .....+-|...+....+.+++ ||+|+|.|+...+. ...+..|..|+++.+..+.+++.+|..+.|++.
T Consensus 342 ~~~~gw~i~P~Gl~~~l~~~~~~Y~~~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~ 421 (469)
T PRK13511 342 TTDWDWIIYPQGLYDQLMRIKKDYPNYKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVISDAISDGANVKGYFI 421 (469)
T ss_pred cCCCCCeECcHHHHHHHHHHHHHcCCCCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 0 0 011123344445445444765 79999999974321 134678999999999999999999999999999
Q ss_pred cccccCCCCCCCCC----ceEEeC
Q 013811 363 WQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 363 W~~~~~g~~~~~dg----~~i~~~ 382 (436)
|++.|+. +|.+| |+++..
T Consensus 422 WSl~Dnf--EW~~Gy~~RfGl~~V 443 (469)
T PRK13511 422 WSLMDVF--SWSNGYEKRYGLFYV 443 (469)
T ss_pred ccccccc--chhcCccCccceEEE
Confidence 9999984 46555 555554
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.1e-18 Score=168.02 Aligned_cols=283 Identities=19% Similarity=0.240 Sum_probs=190.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCC--CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPG--SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg--~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
-+++++|++.||++|+|+.|+-+ .|+++-|..+ ..|+++++.+|+++++|.++||..+++|+++ + .
T Consensus 58 YhrYkeDi~L~~emG~~~~R~SI----~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hf-d-------~ 125 (460)
T COG2723 58 YHRYKEDIALAKEMGLNAFRTSI----EWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHF-D-------L 125 (460)
T ss_pred hhhhHHHHHHHHHcCCCEEEeee----eEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeccc-C-------C
Confidence 47899999999999999999933 3777777543 5999999999999999999999999999874 3 2
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC------------
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP------------ 211 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~------------ 211 (436)
|.|.... |+ |.|.+..+.|.+|.+.+.+| |+|. |-.|.++|||++....
T Consensus 126 P~~L~~~ygG--------W~nR~~i~~F~~ya~~vf~~--------f~dk--Vk~W~TFNE~n~~~~~~y~~~~~~p~~~ 187 (460)
T COG2723 126 PLWLQKPYGG--------WENRETVDAFARYAATVFER--------FGDK--VKYWFTFNEPNVVVELGYLYGGHPPGIV 187 (460)
T ss_pred cHHHhhccCC--------ccCHHHHHHHHHHHHHHHHH--------hcCc--ceEEEEecchhhhhcccccccccCCCcc
Confidence 4555443 22 78999999999999999999 9985 7799999999976431
Q ss_pred C-hHHHHHHH------HHHHHHhhccCCC-C-EEEeCCCcccCCCC-Ccc--------------------ccCCCCCc--
Q 013811 212 S-GRTIQAWI------TEMASYVKSIDRN-H-LLEAGLEGFYGQST-PQR--------------------KRVNPNLD-- 259 (436)
Q Consensus 212 ~-~~~~~~w~------~~~~~~Ir~~Dp~-~-lV~vG~~g~~~~~~-~~~--------------------~~~np~~~-- 259 (436)
+ ...+++.. ..+.+.+|++.|+ . -++......|..+. |+. .+..|.+.
T Consensus 188 ~~~~~~qa~hh~~lA~A~avk~~~~~~~~~kIG~~~~~~p~YP~s~~p~dv~aA~~~~~~~n~~FlD~~~~G~yp~~~~~ 267 (460)
T COG2723 188 DPKAAYQVAHHMLLAHALAVKAIKKINPKGKVGIILNLTPAYPLSDKPEDVKAAENADRFHNRFFLDAQVKGEYPEYLEK 267 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCCcCceEEEeccCcCCCCCCCHHHHHHHHHHHHHhhhhhcchhhcCcCCHHHHH
Confidence 1 11222222 2345778888886 2 23333333344331 110 11222110
Q ss_pred ----cc-------chhhhhcCCCCcceEEeecCC-CC-----------CCCCCCh--------hH---hHHHHHHHHHHH
Q 013811 260 ----IG-------TDFVANNLIPGIDFATVHSYP-DQ-----------WLSSSND--------RD---QLSFLNNWLDTH 305 (436)
Q Consensus 260 ----~g-------~df~~~~~~~~iD~~s~H~Y~-~~-----------w~~~~~~--------~~---~~~~~~~~i~~~ 305 (436)
.+ .|. .......+||+++++|- .. ++....+ +. ..+...+-|...
T Consensus 268 ~~~~~~~~~~~~~~Dl-~~lk~~~~DfiG~NYY~~s~v~~~~~~~~~~~~~~~~~~~~~~p~~~~sdwGWeI~P~GL~~~ 346 (460)
T COG2723 268 ELEENGILPEIEDGDL-EILKENTVDFIGLNYYTPSRVKAAEPRYVSGYGPGGFFTSVPNPGLEVSDWGWEIYPKGLYDI 346 (460)
T ss_pred HHHhcCCCcccCcchH-HHHhcCCCCeEEEeeeeeeeEeeccCCcCCcccccccccccCCCCCcccCCCceeChHHHHHH
Confidence 00 010 11223459999999997 21 1111000 00 122234445555
Q ss_pred HHHHHHhcCCcEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----c
Q 013811 306 IQDAEHILRKPILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----Y 377 (436)
Q Consensus 306 ~~~a~~~~~kPv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~ 377 (436)
+....+.+++|++|+|.|+...+ .+..+..|.+|++..+..+.+++.+|..+.|++.|++.|.- +|..| |
T Consensus 347 l~~~~~rY~~p~fItENG~G~~d~~~~~~i~DdyRI~Yl~~Hl~~v~~AI~dGv~v~GY~~Ws~iD~~--sw~~gy~kRY 424 (460)
T COG2723 347 LEKLYERYGIPLFITENGLGVKDEVDFDGINDDYRIDYLKEHLKAVKKAIEDGVDVRGYFAWSLIDNY--SWANGYKKRY 424 (460)
T ss_pred HHHHHHHhCCCeEEecCCCCcccccccCCcCchHHHHHHHHHHHHHHHHHHcCCCcccceeccccccc--chhhcccccc
Confidence 55555458999999999976542 22466899999999999999999999999999999999963 45544 5
Q ss_pred eEEeC
Q 013811 378 EIVLS 382 (436)
Q Consensus 378 ~i~~~ 382 (436)
++++.
T Consensus 425 Gli~V 429 (460)
T COG2723 425 GLVYV 429 (460)
T ss_pred ccEEE
Confidence 55554
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=172.17 Aligned_cols=284 Identities=18% Similarity=0.213 Sum_probs=187.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
-+++++|++.|+++|+|+.|+-+ .|+++.|. ++.+|++.++.+|.+|+++.++||.++++|+++ + .
T Consensus 70 Yhry~eDi~l~~~lG~~~yR~si----~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~-~-------~ 137 (474)
T PRK09852 70 YHRYKEDIALMAEMGFKVFRTSI----AWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHF-D-------V 137 (474)
T ss_pred hhhhHHHHHHHHHcCCCeEEeec----eeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-C-------C
Confidence 47899999999999999999833 37788875 456899999999999999999999999999864 2 3
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC----------CCh
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD----------PSG 213 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~----------~~~ 213 (436)
|.|.... |. |.+++..+.|.+|++.+++| |++. |-.|...|||++... +.+
T Consensus 138 P~~l~~~~GG--------W~~~~~~~~F~~ya~~~~~~--------fgd~--Vk~WiTfNEPn~~~~~gy~~~g~~~~p~ 199 (474)
T PRK09852 138 PMHLVTEYGS--------WRNRKMVEFFSRYARTCFEA--------FDGL--VKYWLTFNEINIMLHSPFSGAGLVFEEG 199 (474)
T ss_pred CHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHH--------hcCc--CCeEEeecchhhhhccCccccCcccCCC
Confidence 5565432 32 78899999999999999999 9996 558999999984310 111
Q ss_pred ----H-HHHHHH------HHHHHHhhccCCCCEEEeCCC--cccCCC-CCcc------------ccCCCC----Cc-ccc
Q 013811 214 ----R-TIQAWI------TEMASYVKSIDRNHLLEAGLE--GFYGQS-TPQR------------KRVNPN----LD-IGT 262 (436)
Q Consensus 214 ----~-~~~~w~------~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~-~~~~------------~~~np~----~~-~g~ 262 (436)
. .++.-. .++++++|+..|+-.|.+-.. .++..+ .++. +...|. |- ...
T Consensus 200 ~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~d~~AA~~~~~~~~~~~d~~~~G~YP~~~~ 279 (474)
T PRK09852 200 ENQDQVKYQAAHHELVASALATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSA 279 (474)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeeeCCCCHHHHHHHHHHHHHhhhhcchhhCCCccHHHH
Confidence 0 112221 344566788777755553322 122211 1100 000110 00 000
Q ss_pred hhhh-------------hcCCCCcceEEeecCCCCCCCC---------CC-------h--hH---hHHHHHHHHHHHHHH
Q 013811 263 DFVA-------------NNLIPGIDFATVHSYPDQWLSS---------SN-------D--RD---QLSFLNNWLDTHIQD 308 (436)
Q Consensus 263 df~~-------------~~~~~~iD~~s~H~Y~~~w~~~---------~~-------~--~~---~~~~~~~~i~~~~~~ 308 (436)
.+.. ......+||+++++|....... .. . +. ..+...+-|+..+..
T Consensus 280 ~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~gw~i~P~Gl~~~l~~ 359 (474)
T PRK09852 280 RVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNM 359 (474)
T ss_pred HHHHhcCCCCCCCHHHHHHhcCCCCEEEEccccCeecccCCCCCCCCcCCceecccCCCcccCCCCCeeChHHHHHHHHH
Confidence 0000 0113567999999995422110 00 0 00 012233445555555
Q ss_pred HHHhcCCcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC-----ce
Q 013811 309 AEHILRKPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG-----YE 378 (436)
Q Consensus 309 a~~~~~kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg-----~~ 378 (436)
..+.+++||+|+|.|+...+ ....+..|..|++..+..+.+++.+|..+.|++.|++.|+. +|..| |+
T Consensus 360 ~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn~--Ew~~G~y~~RfG 437 (474)
T PRK09852 360 MYDRYQKPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLV--SASTGEMSKRYG 437 (474)
T ss_pred HHHhcCCCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccc--cccCCCccceee
Confidence 55558999999999997432 11356789999999999999999999999999999999984 46555 66
Q ss_pred EEeC
Q 013811 379 IVLS 382 (436)
Q Consensus 379 i~~~ 382 (436)
++..
T Consensus 438 Lv~V 441 (474)
T PRK09852 438 FVYV 441 (474)
T ss_pred eEEE
Confidence 6664
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=171.77 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=188.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++|++.||++|+|+.|+-+ .|+++.|. .+.+|++.++.++.+|+++.++||.++++|+++ + .
T Consensus 68 Yhry~EDI~Lm~elG~~~yRfSI----sWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~-d-------l 135 (477)
T PRK15014 68 YGHYKEDIKLFAEMGFKCFRTSI----AWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHF-E-------M 135 (477)
T ss_pred ccccHHHHHHHHHcCCCEEEecc----cceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-C-------C
Confidence 46899999999999999999833 38888885 456899999999999999999999999999863 2 3
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCC-----C-----C---
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCT-----S-----D--- 210 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~-----~-----~--- 210 (436)
|.|.... |+ |.+++..+.|.+|++.+++| |++. |-.|...|||+.. . .
T Consensus 136 P~~L~~~yGG--------W~n~~~~~~F~~Ya~~~f~~--------fgdr--Vk~WiT~NEp~~~~~~~~~~~gy~~~g~ 197 (477)
T PRK15014 136 PLHLVQQYGS--------WTNRKVVDFFVRFAEVVFER--------YKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGV 197 (477)
T ss_pred CHHHHHhcCC--------CCChHHHHHHHHHHHHHHHH--------hcCc--CCEEEEecCccccccccccccccccccc
Confidence 5565543 33 78899999999999999999 9996 5689999999742 0 0
Q ss_pred --CCh----H-HHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc-----------c-cCCCC----C
Q 013811 211 --PSG----R-TIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR-----------K-RVNPN----L 258 (436)
Q Consensus 211 --~~~----~-~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~-----------~-~~np~----~ 258 (436)
+.. . .++.- ..++++.+|+..|+..|.+-.. .++..+. ++. . ...|. |
T Consensus 198 ~~~~~~~~~~~~~~~~h~~llAHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~~~~~f~d~~~~G~Y 277 (477)
T PRK15014 198 VYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYY 277 (477)
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCceeccCCCCHHHHHHHHHHHHhcccccccccCCCC
Confidence 110 0 11222 1344677888888766654322 2222211 100 0 01111 0
Q ss_pred c-ccch----------hh----hhcCCCCcceEEeecCCCCCCCC---------------CCh--hH---hHHHHHHHHH
Q 013811 259 D-IGTD----------FV----ANNLIPGIDFATVHSYPDQWLSS---------------SND--RD---QLSFLNNWLD 303 (436)
Q Consensus 259 ~-~g~d----------f~----~~~~~~~iD~~s~H~Y~~~w~~~---------------~~~--~~---~~~~~~~~i~ 303 (436)
- .... +. .......+||+++++|....... .+. +. ..+...+-|+
T Consensus 278 P~~~~~~~~~~~~~~~~~~~d~~~i~~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~ 357 (477)
T PRK15014 278 PSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLR 357 (477)
T ss_pred CHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEcceeCeeeccCCCCCCCccccccccCCCCcccCCCCCccCcHHHH
Confidence 0 0000 00 00113567999999995321100 000 00 0122334455
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCC----CC-CChHHHHHHHHHHHHHHHHHhh-cCCCccceeecccccCCCCCCCCC-
Q 013811 304 THIQDAEHILRKPILLAEFGKSRKD----PG-YSTYQRDVMFNTVYYKIYSSAK-RGGAAAGGLFWQLLTEGMDAFRDG- 376 (436)
Q Consensus 304 ~~~~~a~~~~~kPv~i~EfG~~~~~----~g-~~~~~r~~~~~~~~~~i~~~~~-~~~~~~G~~~W~~~~~g~~~~~dg- 376 (436)
..+....+.+++||+|+|.|+...+ .| ..+..|..|++..+..+..++. +|..+.|++.|++.|+. +|..|
T Consensus 358 ~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~~dGv~v~GY~~WSl~Dnf--Ew~~G~ 435 (477)
T PRK15014 358 YALCELYERYQKPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCV--SFTTGQ 435 (477)
T ss_pred HHHHHHHHhcCCCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh--cccCCC
Confidence 5555555558999999999998532 11 3467899999999999999995 89999999999999984 46555
Q ss_pred ----ceEEeC
Q 013811 377 ----YEIVLS 382 (436)
Q Consensus 377 ----~~i~~~ 382 (436)
|++++.
T Consensus 436 y~~RfGl~~V 445 (477)
T PRK15014 436 YSKRYGFIYV 445 (477)
T ss_pred ccCccceEEE
Confidence 666663
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-19 Score=187.49 Aligned_cols=279 Identities=19% Similarity=0.244 Sum_probs=178.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++||+.||++|+|+.|+-+ .|++++|. .|.+|++.++.++.+|+++.++||++|++|++. ..
T Consensus 57 y~~y~eDi~l~~~lg~~~yRfsi----~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~--------~~ 124 (455)
T PF00232_consen 57 YHRYKEDIALMKELGVNAYRFSI----SWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHF--------DL 124 (455)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEE------HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS----------
T ss_pred hhhhhHHHHHHHhhccceeeeec----chhheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeec--------cc
Confidence 47899999999999999999833 37888887 599999999999999999999999999999874 34
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---------C---C
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---------P---S 212 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---------~---~ 212 (436)
|.|....|. |.+++..+.|.+|++.++++ |++. |-.|...|||..... + +
T Consensus 125 P~~l~~~gg--------w~~~~~~~~F~~Ya~~~~~~--------~gd~--V~~w~T~NEp~~~~~~~y~~g~~~p~~~~ 186 (455)
T PF00232_consen 125 PLWLEDYGG--------WLNRETVDWFARYAEFVFER--------FGDR--VKYWITFNEPNVFALLGYLYGGFPPGRDS 186 (455)
T ss_dssp BHHHHHHTG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--BSEEEEEETHHHHHHHHHTSSSSTTCSST
T ss_pred ccceeeccc--------ccCHHHHHHHHHHHHHHHHH--------hCCC--cceEEeccccceeeccccccccccccccc
Confidence 677765453 78899999999999999999 9986 557999999985321 1 1
Q ss_pred hH-H------HHHHHHHHHHHhhccCCCCEEEeCCCc--ccCCCC-C-cc--------------------ccCCCCC---
Q 013811 213 GR-T------IQAWITEMASYVKSIDRNHLLEAGLEG--FYGQST-P-QR--------------------KRVNPNL--- 258 (436)
Q Consensus 213 ~~-~------~~~w~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~-~-~~--------------------~~~np~~--- 258 (436)
.. . +..-..++.+.+|+..|+..|.+-... ++..+. + .. .+..|..
T Consensus 187 ~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~d~~~Aa~~~~~~~n~~f~dpi~~G~YP~~~~~ 266 (455)
T PF00232_consen 187 LKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGIALNFSPFYPLSPSPEDDVAAAERADEFHNGWFLDPIFKGDYPEEMKE 266 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEEEEEEEEEEESSSSHHHHHHHHHHHHHHHTHHHHHHHHHSSSEHHHHH
T ss_pred cchhhHHHhhHHHHHHHHHHHHhhcccceEEeccccccccCCCCccchhhHHHHHHHHHHhhcccccCchhhcCChHHhh
Confidence 11 1 112234557888888888887653321 122111 0 00 0001100
Q ss_pred ---cc--cchhh---hhcCCCCcceEEeecCCCCCC---C--CC--------Ch-----------hHhHHHHHHHHHHHH
Q 013811 259 ---DI--GTDFV---ANNLIPGIDFATVHSYPDQWL---S--SS--------ND-----------RDQLSFLNNWLDTHI 306 (436)
Q Consensus 259 ---~~--g~df~---~~~~~~~iD~~s~H~Y~~~w~---~--~~--------~~-----------~~~~~~~~~~i~~~~ 306 (436)
.. ...|. .......+||+++++|..... + .. .. +.......+.|+..+
T Consensus 267 ~~~~~~~lp~ft~ed~~~ikg~~DFlGiNYYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L 346 (455)
T PF00232_consen 267 YLGERGILPEFTEEDKELIKGSIDFLGINYYTSRYVRADPNPSSPPSYDSDAPFGQPYNPGGPTTDWGWEIYPEGLRDVL 346 (455)
T ss_dssp HHGGGTSSTTSGHHHHHHHTTTTSEEEEEESEEEEEEESSSSTSSTTHEEEESEEEECETSSEBCTTSTBBETHHHHHHH
T ss_pred ccccccccccccchhhhcccccchhhhhccccceeeccCccccccccccCCccccccccccccccccCcccccchHhhhh
Confidence 00 00000 011256899999999953211 0 00 00 000011123344444
Q ss_pred HHHHHhcC-CcEEEEecCCCCCCC----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCCc
Q 013811 307 QDAEHILR-KPILLAEFGKSRKDP----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 307 ~~a~~~~~-kPv~i~EfG~~~~~~----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~ 377 (436)
....+.++ +||+|+|.|+..... ...+..|..|++..+..+.+++.+|..+.|+++|++.|+. +|.+||
T Consensus 347 ~~l~~~Y~~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn~--Ew~~Gy 420 (455)
T PF00232_consen 347 RYLKDRYGNPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSLLDNF--EWAEGY 420 (455)
T ss_dssp HHHHHHHTSSEEEEEEE---EETTCTTSHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETSB-----BGGGGG
T ss_pred hhhccccCCCcEEEecccccccccccccCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeecccccc--ccccCc
Confidence 44433466 999999999976531 1346899999999999999999999999999999999984 576553
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=151.69 Aligned_cols=276 Identities=20% Similarity=0.297 Sum_probs=136.6
Q ss_pred CCCCCEEeeCCeEE--ECCeEEEEEeecccccccc----cCCc-chhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc
Q 013811 28 AGDGFIRTRGSHFL--LNGNLYFANGFNAYWLMYV----ASDP-SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR 100 (436)
Q Consensus 28 ~~~~fv~v~g~~f~--~nGkp~~~~G~N~~~~~~~----~~~~-~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~ 100 (436)
++...|+++|++|. .+|+.|+++|+.+...... ..|| .+.+.+++|+..|+++|+|+||++....
T Consensus 6 ~~~~pI~ikG~kff~~~~g~~F~ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~vdp-------- 77 (314)
T PF03198_consen 6 AAVPPIEIKGNKFFYSKNGTRFFIKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYSVDP-------- 77 (314)
T ss_dssp TTS--EEEETTEEEETTT--B--EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES---T--------
T ss_pred ccCCCEEEECCEeEECCCCCEEEEeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEEeCC--------
Confidence 34556999999999 5999999999997433321 1245 4668999999999999999999966421
Q ss_pred CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHh
Q 013811 101 SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLN 180 (436)
Q Consensus 101 ~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~ 180 (436)
. ..-|.++.+..+.|||||++|... .+.++.. .+..-| -..+.+....++.
T Consensus 78 ~---------~nHd~CM~~~~~aGIYvi~Dl~~p---~~sI~r~------------~P~~sw-----~~~l~~~~~~vid 128 (314)
T PF03198_consen 78 S---------KNHDECMSAFADAGIYVILDLNTP---NGSINRS------------DPAPSW-----NTDLLDRYFAVID 128 (314)
T ss_dssp T---------S--HHHHHHHHHTT-EEEEES-BT---TBS--TT------------S-----------HHHHHHHHHHHH
T ss_pred C---------CCHHHHHHHHHhCCCEEEEecCCC---CccccCC------------CCcCCC-----CHHHHHHHHHHHH
Confidence 1 123789999999999999999653 1111100 001112 2334445556666
Q ss_pred ccccccccccCCCCcEEEEEeecCCCCCCCC--ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCC-
Q 013811 181 RYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN- 257 (436)
Q Consensus 181 r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~- 257 (436)
. ++..|+++++-.+||-...... .++-+++.++.|.++||+... +.|.||...- ..++.......
T Consensus 129 ~--------fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVGYsaa---D~~~~r~~~a~Y 196 (314)
T PF03198_consen 129 A--------FAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVGYSAA---DDAEIRQDLANY 196 (314)
T ss_dssp H--------HTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEEE------TTTHHHHHHH
T ss_pred H--------hccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceeEEcc---CChhHHHHHHHH
Confidence 6 8888999999999998764321 245678888999999998654 5566665321 01100000000
Q ss_pred CcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHH
Q 013811 258 LDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRD 337 (436)
Q Consensus 258 ~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~ 337 (436)
+..|.+ ...+||++++.|. |...++++.. -.....+.... +..|++++|||+....+.
T Consensus 197 l~Cg~~------~~~iDf~g~N~Y~--WCg~Stf~~S------Gy~~l~~~f~~-y~vPvffSEyGCn~~~pR------- 254 (314)
T PF03198_consen 197 LNCGDD------DERIDFFGLNSYE--WCGDSTFETS------GYDRLTKEFSN-YSVPVFFSEYGCNTVTPR------- 254 (314)
T ss_dssp TTBTT-----------S-EEEEE------SS--HHHH------SHHHHHHHHTT--SS-EEEEEE---SSSS--------
T ss_pred hcCCCc------ccccceeeeccce--ecCCCccccc------cHHHHHHHhhC-CCCCeEEcccCCCCCCCc-------
Confidence 111211 2489999999995 8765544321 12333444554 899999999999865432
Q ss_pred HHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCCceEEeC
Q 013811 338 VMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLS 382 (436)
Q Consensus 338 ~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~~ 382 (436)
.+.++- .++..-.. ....|.+...|..+. ++|++|--
T Consensus 255 -~f~ev~-aly~~~Mt-~v~SGGivYEy~~e~-----n~yGlV~~ 291 (314)
T PF03198_consen 255 -TFTEVP-ALYSPEMT-DVWSGGIVYEYFQEA-----NNYGLVEI 291 (314)
T ss_dssp ---THHH-HHTSHHHH-TTEEEEEES-SB--S-----SS--SEEE
T ss_pred -cchHhH-HhhCccch-hheeceEEEEEeccC-----CceEEEEE
Confidence 111111 12221111 257899999998762 45666663
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.8e-15 Score=158.66 Aligned_cols=156 Identities=16% Similarity=0.237 Sum_probs=122.9
Q ss_pred cCCCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCC
Q 013811 27 EAGDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGS 104 (436)
Q Consensus 27 ~~~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~ 104 (436)
....|| |++..+.|.+||||++++|+|.|..........+.+.++++|+.||++|+|+||++.+.
T Consensus 278 ~~~iGfR~iei~~~~~~iNGkpvf~kGvnrHe~~~~~G~~~~~~~~~~dl~lmk~~n~N~vRtsHyP------------- 344 (808)
T COG3250 278 ALRIGFRTVEIKDGLLLINGKPVFIRGVNRHEDDPILGRVTDEDAMERDLKLMKEANMNSVRTSHYP------------- 344 (808)
T ss_pred EeeeccEEEEEECCeEEECCeEEEEeeeecccCCCccccccCHHHHHHHHHHHHHcCCCEEEecCCC-------------
Confidence 345788 88888999999999999999987665543333345669999999999999999997542
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
++ ..+.+.|.++||+|+-+..-.+. + +..+++.++.....+++||+|
T Consensus 345 ~~-------~~~ydLcDelGllV~~Ea~~~~~---------------~--------~~~~~~~~k~~~~~i~~mver--- 391 (808)
T COG3250 345 NS-------EEFYDLCDELGLLVIDEAMIETH---------------G--------MPDDPEWRKEVSEEVRRMVER--- 391 (808)
T ss_pred CC-------HHHHHHHHHhCcEEEEecchhhc---------------C--------CCCCcchhHHHHHHHHHHHHh---
Confidence 22 26789999999999877532210 1 115678888999999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCc
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEG 242 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g 242 (436)
.||||+|++|.++||...... ...+...||+.||+++|..+...
T Consensus 392 -----~knHPSIiiWs~gNE~~~g~~---------~~~~~~~~k~~d~~r~~~~~~~~ 435 (808)
T COG3250 392 -----DRNHPSIIIWSLGNESGHGSN---------HWALYRWFKASDPTRPVQYEGRG 435 (808)
T ss_pred -----ccCCCcEEEEeccccccCccc---------cHHHHHHHhhcCCccceeccCcc
Confidence 999999999999999886432 25567889999999999887654
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=141.52 Aligned_cols=243 Identities=15% Similarity=0.158 Sum_probs=138.7
Q ss_pred HHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEeccc--CCCCCCChhhhhh
Q 013811 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLAN--NYDSFGGKKQYVN 146 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~--~w~~~gg~~~y~~ 146 (436)
.+..|+.||+.|+|.||+=++.+. . .|..+ ++..-.+...|+++||+|+|+||- .|.+.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRvwv~P-------~~~g~~~---~~~~~~~akrak~~Gm~vlldfHYSD~WaDP-------- 87 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRVWVNP-------YDGGYND---LEDVIALAKRAKAAGMKVLLDFHYSDFWADP-------- 87 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-SS--------TTTTTTS---HHHHHHHHHHHHHTT-EEEEEE-SSSS--BT--------
T ss_pred CCCHHHHHHhcCCCeEEEEeccCC-------cccccCC---HHHHHHHHHHHHHCCCeEEEeecccCCCCCC--------
Confidence 356799999999999999444332 2 24334 566667888899999999999983 23332
Q ss_pred HHhhcCCCCCCCCCCC--CChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCCC------ChHHHH
Q 013811 147 WARSQGQFLTSDDDFF--RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSDP------SGRTIQ 217 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~--~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~~------~~~~~~ 217 (436)
|++. .+..+= +-.++.++..+|.+.+++. +++. -.+-+++++||-+..... .-+.+.
T Consensus 88 -----g~Q~-~P~aW~~~~~~~l~~~v~~yT~~vl~~--------l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a 153 (332)
T PF07745_consen 88 -----GKQN-KPAAWANLSFDQLAKAVYDYTKDVLQA--------LKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLA 153 (332)
T ss_dssp -----TB-B---TTCTSSSHHHHHHHHHHHHHHHHHH--------HHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHH
T ss_pred -----CCCC-CCccCCCCCHHHHHHHHHHHHHHHHHH--------HHHCCCCccEEEeCccccccccCcCCCccCHHHHH
Confidence 2210 111111 2256677778888888887 5554 224468999998865421 346788
Q ss_pred HHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHH
Q 013811 218 AWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSF 297 (436)
Q Consensus 218 ~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~ 297 (436)
++++..+++||+.+|+..|++..+.-... ..+.+--+... ...-..|++++++||. |.. + +..
T Consensus 154 ~ll~ag~~AVr~~~p~~kV~lH~~~~~~~---------~~~~~~f~~l~-~~g~d~DviGlSyYP~-w~~--~----l~~ 216 (332)
T PF07745_consen 154 KLLNAGIKAVREVDPNIKVMLHLANGGDN---------DLYRWFFDNLK-AAGVDFDVIGLSYYPF-WHG--T----LED 216 (332)
T ss_dssp HHHHHHHHHHHTHSSTSEEEEEES-TTSH---------HHHHHHHHHHH-HTTGG-SEEEEEE-ST-TST-------HHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCch---------HHHHHHHHHHH-hcCCCcceEEEecCCC-Ccc--h----HHH
Confidence 88899999999999999999875421100 00000001111 1124568999999996 543 1 122
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEecCCCCCC----------------CC--CChHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013811 298 LNNWLDTHIQDAEHILRKPILLAEFGKSRKD----------------PG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAG 359 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~----------------~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G 359 (436)
+ ...+....+.++|||+|.|.|.+... .+ .+++.+..+++.+++.+.+- . ++.+.|
T Consensus 217 l----~~~l~~l~~ry~K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~-p-~~~g~G 290 (332)
T PF07745_consen 217 L----KNNLNDLASRYGKPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNV-P-NGGGLG 290 (332)
T ss_dssp H----HHHHHHHHHHHT-EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS----TTEEE
T ss_pred H----HHHHHHHHHHhCCeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHh-c-cCCeEE
Confidence 2 22233322348999999999987551 01 25677889999888876442 1 247889
Q ss_pred eeec--cccc
Q 013811 360 GLFW--QLLT 367 (436)
Q Consensus 360 ~~~W--~~~~ 367 (436)
.+|| .|..
T Consensus 291 vfYWeP~w~~ 300 (332)
T PF07745_consen 291 VFYWEPAWIP 300 (332)
T ss_dssp EEEE-TT-GG
T ss_pred EEeecccccc
Confidence 9999 4444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-13 Score=132.24 Aligned_cols=168 Identities=22% Similarity=0.350 Sum_probs=100.7
Q ss_pred CCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCC-------CC--CC-ccCC---
Q 013811 37 GSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGG-------YR--PL-QRSP--- 102 (436)
Q Consensus 37 g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~-------~~--~l-q~~p--- 102 (436)
+.+|+ .||+||++.|-.. |..+... ++++++..|+..++.|+|+||+-++.... ++ ++ ...+
T Consensus 2 ~r~f~~~dG~Pff~lgdT~-W~~~~~~---~~~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~ 77 (289)
T PF13204_consen 2 GRHFVYADGTPFFWLGDTA-WSLFHRL---TREEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQF 77 (289)
T ss_dssp SSSEEETTS-B--EEEEE--TTHHHH-----HHHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT----
T ss_pred CceEecCCCCEEeehhHHH-HHHhhCC---CHHHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCcccc
Confidence 56788 4999999999665 5444321 34788899999999999999996654310 11 11 1111
Q ss_pred --CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh--hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 103 --GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY--VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTV 178 (436)
Q Consensus 103 --g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y--~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~i 178 (436)
..+|++.|+.+|++|+.|.++||.+.|.+. |.. .| ..|... ...+ -.+..++|++.|
T Consensus 78 d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~--wg~-----~~~~~~Wg~~--------~~~m----~~e~~~~Y~~yv 138 (289)
T PF13204_consen 78 DFTRPNPAYFDHLDRRIEKANELGIEAALVPF--WGC-----PYVPGTWGFG--------PNIM----PPENAERYGRYV 138 (289)
T ss_dssp --TT----HHHHHHHHHHHHHHTT-EEEEESS---HH-----HHH---------------TTSS-----HHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEE--ECC-----cccccccccc--------ccCC----CHHHHHHHHHHH
Confidence 237899999999999999999999977664 311 12 123210 0111 245677899999
Q ss_pred HhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCC
Q 013811 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLE 241 (436)
Q Consensus 179 v~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~ 241 (436)
++| |+..|+|+ |.|+||- .. .....+..++|++.||+.||.+|+|+...
T Consensus 139 ~~R--------y~~~~Nvi-W~l~gd~-~~----~~~~~~~w~~~~~~i~~~dp~~L~T~H~~ 187 (289)
T PF13204_consen 139 VAR--------YGAYPNVI-WILGGDY-FD----TEKTRADWDAMARGIKENDPYQLITIHPC 187 (289)
T ss_dssp HHH--------HTT-SSEE-EEEESSS-------TTSSHHHHHHHHHHHHHH--SS-EEEEE-
T ss_pred HHH--------HhcCCCCE-EEecCcc-CC----CCcCHHHHHHHHHHHHhhCCCCcEEEeCC
Confidence 999 99999998 9999999 22 12235556899999999999999987653
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.1e-13 Score=141.58 Aligned_cols=200 Identities=19% Similarity=0.245 Sum_probs=140.2
Q ss_pred chhHHHHHHHHHHHhhcccccccccCCCCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCC
Q 013811 3 RLHLAFAIFLAFFIHRQSFNVLHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGL 82 (436)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 82 (436)
|-+++..+||+||++++++=+-.. ..-|++++..|++||+|+++..-.+|+... .++.++..|+.||++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~d~~~f~idG~p~~i~sG~iHY~R~------~p~~W~d~L~k~Ka~Gl 73 (840)
T PLN03059 3 RGSLVVFLLLFLLFLLSSSWVSHG---SASVSYDHRAFIINGQRRILISGSIHYPRS------TPEMWPDLIQKAKDGGL 73 (840)
T ss_pred ccceehhhHHHHHHHhhhhhhccc---eeEEEEeCCEEEECCEEEEEEEeCcccCcC------CHHHHHHHHHHHHHcCC
Confidence 334444444555555444433111 113899999999999999999999887653 24789999999999999
Q ss_pred CEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhh-cCCCCCC
Q 013811 83 TVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARS-QGQFLTS 157 (436)
Q Consensus 83 N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~-~G~~~~~ 157 (436)
|+|=++++ |+.-||.||.||-+....|.++|++|++.||+||+-.- ..|+ +||. |.|... .+..+.
T Consensus 74 NtV~tYV~----Wn~HEp~~G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~-~GGl---P~WL~~~~~i~~R- 144 (840)
T PLN03059 74 DVIQTYVF----WNGHEPSPGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWN-FGGF---PVWLKYVPGIEFR- 144 (840)
T ss_pred CeEEEEec----ccccCCCCCeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeec-CCCC---chhhhcCCCcccc-
Confidence 99999887 66778999999988889999999999999999999874 3353 5876 566542 121111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---CChHHHHHHHHHHHH
Q 013811 158 DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---PSGRTIQAWITEMAS 225 (436)
Q Consensus 158 ~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---~~~~~~~~w~~~~~~ 225 (436)
-+||...++.++|+.+|+..+-+ .+..+++--.|++.++.||-..... .+...+.+|+++|+.
T Consensus 145 ----s~d~~fl~~v~~~~~~l~~~l~~-~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~ 210 (840)
T PLN03059 145 ----TDNGPFKAAMQKFTEKIVDMMKS-EKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAV 210 (840)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHhh-cceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHH
Confidence 24788888888888888887410 1122455556889999999875421 123456666665553
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.2e-12 Score=129.43 Aligned_cols=282 Identities=17% Similarity=0.244 Sum_probs=173.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CC--CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SP--GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~p--g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+++.|+- . .|+++-| .+ +..|++.++.+..+|++..++||.++++|++ |+.
T Consensus 90 Yh~ykeDv~Lmk~lgv~afRFS-I---sWSRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfH-wDl------ 158 (524)
T KOG0626|consen 90 YHRYKEDVKLMKELGVDAFRFS-I---SWSRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFH-WDL------ 158 (524)
T ss_pred hhhhHHHHHHHHHcCCCeEEEE-e---ehHhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEec-CCC------
Confidence 4689999999999999999983 2 2666655 22 4589999999999999999999999999985 543
Q ss_pred hhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC-------------
Q 013811 144 YVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD------------- 210 (436)
Q Consensus 144 y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~------------- 210 (436)
|.+...+ -.=|-++...+.|++|.+-+.++ |+|. |-.|...|||+....
T Consensus 159 -Pq~LeDe-------YgGwLn~~ivedF~~yA~~CF~~--------fGDr--VK~WiT~NEP~v~s~~gY~~G~~aPGrC 220 (524)
T KOG0626|consen 159 -PQALEDE-------YGGWLNPEIVEDFRDYADLCFQE--------FGDR--VKHWITFNEPNVFSIGGYDTGTKAPGRC 220 (524)
T ss_pred -CHHHHHH-------hccccCHHHHHHHHHHHHHHHHH--------hccc--ceeeEEecccceeeeehhccCCCCCCCC
Confidence 3333321 01167899999999999999999 9996 779999999994321
Q ss_pred ----------CCh-HHH---HHH---HHHHHHHhhcc-CC--CCEEEeCCCc-ccCCCCC--c-------------cccC
Q 013811 211 ----------PSG-RTI---QAW---ITEMASYVKSI-DR--NHLLEAGLEG-FYGQSTP--Q-------------RKRV 254 (436)
Q Consensus 211 ----------~~~-~~~---~~w---~~~~~~~Ir~~-Dp--~~lV~vG~~g-~~~~~~~--~-------------~~~~ 254 (436)
.++ +.+ ... ..++....|+. .+ +=.|.+.... |+-+.++ + +|..
T Consensus 221 s~~~~~c~~g~s~~epYiv~HNllLAHA~Av~~yr~kyk~~Q~G~IGi~~~~~w~eP~~~s~~D~~Aa~Ra~~F~~gw~l 300 (524)
T KOG0626|consen 221 SKYVGNCSAGNSGTEPYIVAHNLLLAHAAAVDLYRKKYKKKQGGKIGIALSARWFEPYDDSKEDKEAAERALDFFLGWFL 300 (524)
T ss_pred CcccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhcCCeEeEEEeeeeeccCCCChHHHHHHHHHHHhhhhhhh
Confidence 011 111 111 12233333332 11 1133322211 2221111 0 0111
Q ss_pred CCCCcccchh---------------h---hhcCCCCcceEEeecCCCCCCCC----C-----------------------
Q 013811 255 NPNLDIGTDF---------------V---ANNLIPGIDFATVHSYPDQWLSS----S----------------------- 289 (436)
Q Consensus 255 np~~~~g~df---------------~---~~~~~~~iD~~s~H~Y~~~w~~~----~----------------------- 289 (436)
.| .. ..|+ . ........||+++++|...+... .
T Consensus 301 ~p-~~-~GdYP~~Mk~~vg~rLP~FT~ee~~~lKGS~DFvGiNyYts~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 378 (524)
T KOG0626|consen 301 EP-LT-FGDYPDEMKERVGSRLPKFTEEESKLLKGSYDFVGINYYTSRYVKHLKPPPDPSQPGWSTDSGVDWTLEGNDLI 378 (524)
T ss_pred cc-cc-cCCcHHHHHHHhcccCCCCCHHHHHHhcCchhhceeehhhhhhhhccCCCCCCCCcccccccceeeeecccccc
Confidence 11 00 0011 1 01224677999999995322100 0
Q ss_pred ---ChhHhHHHHHHHHHHHHHHHHHh-cCCcEEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHhh-cCCCc
Q 013811 290 ---NDRDQLSFLNNWLDTHIQDAEHI-LRKPILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSAK-RGGAA 357 (436)
Q Consensus 290 ---~~~~~~~~~~~~i~~~~~~a~~~-~~kPv~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~~-~~~~~ 357 (436)
.....+.....-|+..+..+++. .+.|++|+|.|+..... ...+..|.+|++..+..+.++++ .+..+
T Consensus 379 ~~~~~~~~~~v~P~Glr~~L~yiK~~Y~np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dgvnv 458 (524)
T KOG0626|consen 379 GPKAGSDWLPVYPWGLRKLLNYIKDKYGNPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDGVNV 458 (524)
T ss_pred cccccccceeeccHHHHHHHHHHHhhcCCCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcCCce
Confidence 00000111122244444444443 36999999999987531 23567899999999999999987 67788
Q ss_pred cceeecccccCCCCCCCCCceEEe
Q 013811 358 AGGLFWQLLTEGMDAFRDGYEIVL 381 (436)
Q Consensus 358 ~G~~~W~~~~~g~~~~~dg~~i~~ 381 (436)
.|++.|++.|+. +|.+||.+.+
T Consensus 459 ~GYf~WSLmDnf--Ew~~Gy~~RF 480 (524)
T KOG0626|consen 459 KGYFVWSLLDNF--EWLDGYKVRF 480 (524)
T ss_pred eeEEEeEcccch--hhhcCccccc
Confidence 999999999984 5777644333
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-12 Score=123.77 Aligned_cols=221 Identities=22% Similarity=0.311 Sum_probs=142.7
Q ss_pred CCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHH
Q 013811 95 YRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNL 174 (436)
Q Consensus 95 ~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~ 174 (436)
|..++|++|.|| ++.+|.+++.|+++||++---.. -|.. +.|.|.... ..++.++.+.+|
T Consensus 3 W~~~ep~~G~~n---~~~~D~~~~~a~~~gi~v~gH~l-~W~~-----~~P~W~~~~-----------~~~~~~~~~~~~ 62 (254)
T smart00633 3 WDSTEPSRGQFN---FSGADAIVNFAKENGIKVRGHTL-VWHS-----QTPDWVFNL-----------SKETLLARLENH 62 (254)
T ss_pred cccccCCCCccC---hHHHHHHHHHHHHCCCEEEEEEE-eecc-----cCCHhhhcC-----------CHHHHHHHHHHH
Confidence 667899999998 88999999999999999832111 1322 346776421 135678899999
Q ss_pred HHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----C--hHHH-HHHHHHHHHHhhccCCCCEEEeCCCcccCCC
Q 013811 175 IKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----S--GRTI-QAWITEMASYVKSIDRNHLLEAGLEGFYGQS 247 (436)
Q Consensus 175 v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~--~~~~-~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~ 247 (436)
++.+++| |++. |..|++.|||...... + .+.+ ..|+..+.+.+|+.||+..+.+.. |+..
T Consensus 63 i~~v~~r--------y~g~--i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Nd---y~~~ 129 (254)
T smart00633 63 IKTVVGR--------YKGK--IYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYND---YNTE 129 (254)
T ss_pred HHHHHHH--------hCCc--ceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEec---cCCc
Confidence 9999999 9875 7789999999864311 0 0001 267888999999999998887753 2221
Q ss_pred CCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 013811 248 TPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFG 323 (436)
Q Consensus 248 ~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG 323 (436)
.+... ...+ .+++... ..-.+|-+++ |.+... .+. . .+.+.++...+ .++||+|+|++
T Consensus 130 ~~~~k--~~~~---~~~v~~l~~~g~~iDgiGlQ~H~~~~~----~~~----~----~~~~~l~~~~~-~g~pi~iTE~d 191 (254)
T smart00633 130 EPNAK--RQAI---YELVKKLKAKGVPIDGIGLQSHLSLGS----PNI----A----EIRAALDRFAS-LGLEIQITELD 191 (254)
T ss_pred CccHH--HHHH---HHHHHHHHHCCCccceeeeeeeecCCC----CCH----H----HHHHHHHHHHH-cCCceEEEEee
Confidence 11000 0000 1122211 1123776666 443211 111 1 24444555554 79999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCC
Q 013811 324 KSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRD 375 (436)
Q Consensus 324 ~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~d 375 (436)
+.... +++.++++++.++..+++. +.+.|.++|.+.|.. .|.+
T Consensus 192 v~~~~---~~~~qA~~~~~~l~~~~~~----p~v~gi~~Wg~~d~~--~W~~ 234 (254)
T smart00633 192 ISGYP---NPQAQAADYEEVFKACLAH----PAVTGVTVWGVTDKY--SWLD 234 (254)
T ss_pred cCCCC---cHHHHHHHHHHHHHHHHcC----CCeeEEEEeCCccCC--cccC
Confidence 98652 3367888888888877664 367899999998863 4644
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.9e-12 Score=124.55 Aligned_cols=168 Identities=15% Similarity=0.225 Sum_probs=110.1
Q ss_pred eEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHH
Q 013811 39 HFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIA 118 (436)
Q Consensus 39 ~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~ 118 (436)
+|++||||+++.+--.|+.... ++.+++.|+.||++|+|+|-++++ |+..++.+|+||-+....|+.+|+
T Consensus 1 ~~~~~g~~~~~~~Ge~hy~r~p------~~~W~~~l~k~ka~G~n~v~~yv~----W~~he~~~g~~df~g~~dl~~f~~ 70 (319)
T PF01301_consen 1 SFLIDGKPFFILSGEFHYFRIP------PEYWRDRLQKMKAAGLNTVSTYVP----WNLHEPEEGQFDFTGNRDLDRFLD 70 (319)
T ss_dssp CEEETTEEE-EEEEEE-GGGS-------GGGHHHHHHHHHHTT-SEEEEE------HHHHSSBTTB---SGGG-HHHHHH
T ss_pred CeEECCEEEEEEEeeeccccCC------hhHHHHHHHHHHhCCcceEEEecc----ccccCCCCCcccccchhhHHHHHH
Confidence 4889999999999888766542 378999999999999999999876 556788999999888889999999
Q ss_pred HHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 119 EARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 119 ~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
.|+++||+||+-+- ..|+ +||. |.|.... +.. ---+|+...++.+++++.|++.+-+ ..+++.
T Consensus 71 ~a~~~gl~vilrpGpyi~aE~~-~gG~---P~Wl~~~~~~~-----~R~~~~~~~~~~~~~~~~~~~~~~~---~~~~~G 138 (319)
T PF01301_consen 71 LAQENGLYVILRPGPYICAEWD-NGGL---PAWLLRKPDIR-----LRTNDPPFLEAVERWYRALAKIIKP---LQYTNG 138 (319)
T ss_dssp HHHHTT-EEEEEEES---TTBG-GGG-----GGGGGSTTS------SSSS-HHHHHHHHHHHHHHHHHHGG---GBGGGT
T ss_pred HHHHcCcEEEecccceeccccc-chhh---hhhhhcccccc-----ccccchhHHHHHHHHHHHHHHHHHh---hhhcCC
Confidence 99999999999863 2232 3664 5666532 111 1124677778888888887777544 336666
Q ss_pred CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCC
Q 013811 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRN 233 (436)
Q Consensus 194 p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~ 233 (436)
-.|++.++.||..... .-.+.++.+.+..++.-+.
T Consensus 139 GpII~vQvENEyg~~~-----~~~~Y~~~l~~~~~~~g~~ 173 (319)
T PF01301_consen 139 GPIIMVQVENEYGSYG-----TDRAYMEALKDAYRDWGID 173 (319)
T ss_dssp SSEEEEEESSSGGCTS-----S-HHHHHHHHHHHHHTT-S
T ss_pred CceehhhhhhhhCCCc-----ccHhHHHHHHHHHHHhhCc
Confidence 6799999999998332 1234444555555544333
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.5e-12 Score=127.58 Aligned_cols=114 Identities=25% Similarity=0.306 Sum_probs=83.7
Q ss_pred HHHHHHHHHHCCCCEEEEccccCCCCCCCcc----CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQR----SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~----~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.++++.++++.|+|+||++.. |-.+++ .|.....+.+..||++|++|.++||+|+|++|... |+.+..
T Consensus 75 ~~~~~~~ik~~G~n~VRiPi~----~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~---~~~~~~- 146 (407)
T COG2730 75 TEEDFDQIKSAGFNAVRIPIG----YWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYP---GGNNGH- 146 (407)
T ss_pred hhhHHHHHHHcCCcEEEcccc----hhhhhccCCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccC---CCCCCc-
Confidence 489999999999999999553 112232 34434345566999999999999999999999752 221110
Q ss_pred hHHhhcCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCC
Q 013811 146 NWARSQGQFLTSDDDFFRN-PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~ 207 (436)
........|.. ...++++.+.++.++.| |++.++|+++++.|||+.
T Consensus 147 --------~~s~~~~~~~~~~~~~~~~~~~w~~ia~~--------f~~~~~VIg~~~~NEP~~ 193 (407)
T COG2730 147 --------EHSGYTSDYKEENENVEATIDIWKFIANR--------FKNYDTVIGFELINEPNG 193 (407)
T ss_pred --------CcccccccccccchhHHHHHHHHHHHHHh--------ccCCCceeeeeeecCCcc
Confidence 00111233333 45678999999999999 999999999999999996
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.5e-13 Score=105.51 Aligned_cols=75 Identities=27% Similarity=0.586 Sum_probs=47.8
Q ss_pred cCCCCcEEEEEeecC-CCCCC--------CCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcc
Q 013811 190 YKDDPTIMAWELMNE-PRCTS--------DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDI 260 (436)
Q Consensus 190 yk~~p~I~~weL~NE-p~~~~--------~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~ 260 (436)
|+++|+|++|+|+|| |.... ....+.+..|+++++++||++||+++|++|..+. ..
T Consensus 5 ~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~~~~---~~------------ 69 (88)
T PF12876_consen 5 FGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGFWGG---DW------------ 69 (88)
T ss_dssp TT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B--S----T------------
T ss_pred hcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeecccC---CH------------
Confidence 999999999999999 66221 1124679999999999999999999999886432 10
Q ss_pred cchhhhhcCCCCcceEEeecC
Q 013811 261 GTDFVANNLIPGIDFATVHSY 281 (436)
Q Consensus 261 g~df~~~~~~~~iD~~s~H~Y 281 (436)
..+ .....+.+||++||.|
T Consensus 70 -~~~-~~~~~~~~DvisfH~Y 88 (88)
T PF12876_consen 70 -EDL-EQLQAENLDVISFHPY 88 (88)
T ss_dssp -THH-HHS--TT-SSEEB-EE
T ss_pred -HHH-HHhchhcCCEEeeecC
Confidence 012 2233589999999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.8e-10 Score=103.25 Aligned_cols=271 Identities=17% Similarity=0.214 Sum_probs=150.0
Q ss_pred EEEeecccccccccCCc---c-hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHc
Q 013811 48 FANGFNAYWLMYVASDP---S-QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKY 123 (436)
Q Consensus 48 ~~~G~N~~~~~~~~~~~---~-~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~ 123 (436)
|+.|+..-++....... . +....+..|+.||++|+|.||+=++.|.....-+.--|..++ +...-++-..|++.
T Consensus 39 FikGaDis~l~~lE~~Gvkf~d~ng~~qD~~~iLK~~GvNyvRlRvwndP~dsngn~yggGnnD--~~k~ieiakRAk~~ 116 (403)
T COG3867 39 FIKGADISSLIELENSGVKFFDTNGVRQDALQILKNHGVNYVRLRVWNDPYDSNGNGYGGGNND--LKKAIEIAKRAKNL 116 (403)
T ss_pred hhccccHHHHHHHHHcCceEEccCChHHHHHHHHHHcCcCeEEEEEecCCccCCCCccCCCcch--HHHHHHHHHHHHhc
Confidence 45666654544321110 0 113445668999999999999854443211111111122221 45555677788999
Q ss_pred CCEEEEeccc--CCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEEE
Q 013811 124 GIKLILSLAN--NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAWE 200 (436)
Q Consensus 124 Gi~vil~l~~--~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~we 200 (436)
||+|++++|- +|.+.+-...--.|.. .. | ...+++...|-+.+++. .++.- .+-+.+
T Consensus 117 GmKVl~dFHYSDfwaDPakQ~kPkaW~~---------l~-f--e~lk~avy~yTk~~l~~--------m~~eGi~pdmVQ 176 (403)
T COG3867 117 GMKVLLDFHYSDFWADPAKQKKPKAWEN---------LN-F--EQLKKAVYSYTKYVLTT--------MKKEGILPDMVQ 176 (403)
T ss_pred CcEEEeeccchhhccChhhcCCcHHhhh---------cC-H--HHHHHHHHHHHHHHHHH--------HHHcCCCccceE
Confidence 9999999983 3443211000011211 00 1 34455556666666666 55542 234679
Q ss_pred eecCCCCCCC-CCh-----HHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCC-CcccchhhhhcCCCCc
Q 013811 201 LMNEPRCTSD-PSG-----RTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN-LDIGTDFVANNLIPGI 273 (436)
Q Consensus 201 L~NEp~~~~~-~~~-----~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~-~~~g~df~~~~~~~~i 273 (436)
++||-+...- +++ +.+.+++++.+.+||+.+|+.+|.+.... + .|++ |.+.-|-.. ...-..
T Consensus 177 VGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~p~ikv~lHla~------g----~~n~~y~~~fd~lt-k~nvdf 245 (403)
T COG3867 177 VGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVSPTIKVALHLAE------G----ENNSLYRWIFDELT-KRNVDF 245 (403)
T ss_pred eccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcCCCceEEEEecC------C----CCCchhhHHHHHHH-HcCCCc
Confidence 9999987643 222 45777788889999999999998875421 0 0221 221111000 112345
Q ss_pred ceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCC---CCC-------------CCC--ChHH
Q 013811 274 DFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKS---RKD-------------PGY--STYQ 335 (436)
Q Consensus 274 D~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~---~~~-------------~g~--~~~~ 335 (436)
|+++.-+||. |... . .- |...+.+....++|-|+|.|.+.. .+. .++ +.+-
T Consensus 246 DVig~SyYpy-Whgt--l----~n----L~~nl~dia~rY~K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQG 314 (403)
T COG3867 246 DVIGSSYYPY-WHGT--L----NN----LTTNLNDIASRYHKDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQG 314 (403)
T ss_pred eEEeeecccc-ccCc--H----HH----HHhHHHHHHHHhcCeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEec
Confidence 7899999997 4332 1 11 122222222348999999999872 110 122 3356
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccceeecc
Q 013811 336 RDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364 (436)
Q Consensus 336 r~~~~~~~~~~i~~~~~~~~~~~G~~~W~ 364 (436)
++.+.+++++.+..-.+ +...|.+||.
T Consensus 315 Qat~vrDvie~V~nvp~--~~GlGvFYWE 341 (403)
T COG3867 315 QATFVRDVIEAVKNVPK--SNGLGVFYWE 341 (403)
T ss_pred hhhHHHHHHHHHHhCCC--CCceEEEEec
Confidence 77888888877644321 2467999996
|
|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.6e-10 Score=116.54 Aligned_cols=175 Identities=19% Similarity=0.341 Sum_probs=124.8
Q ss_pred eeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHH
Q 013811 35 TRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLD 114 (436)
Q Consensus 35 v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD 114 (436)
-++..|.++|+++.+.|..++.... .++.+.++|+.||++|+|+||+-.| .|+.++|..|.|| |..+|
T Consensus 3 ~~~~~~~~dg~~~~l~gG~y~p~~~------p~~~w~ddl~~mk~~G~N~V~ig~f---aW~~~eP~eG~fd---f~~~D 70 (673)
T COG1874 3 YDGYSFIRDGRRILLYGGDYYPERW------PRETWMDDLRKMKALGLNTVRIGYF---AWNLHEPEEGKFD---FTWLD 70 (673)
T ss_pred ccccceeeCCceeEEeccccChHHC------CHHHHHHHHHHHHHhCCCeeEeeeE---EeeccCccccccC---cccch
Confidence 3567788999999999998754332 2378999999999999999999444 3778999999999 44666
Q ss_pred HH-HHHHHHcCCEEEEecccCCCCCCCh-----hhhhhHHhhc--CCC---CCCCCCCCCChHHHHHHHHHHHHHHhccc
Q 013811 115 FV-IAEARKYGIKLILSLANNYDSFGGK-----KQYVNWARSQ--GQF---LTSDDDFFRNPVVKGYYKNLIKTVLNRYN 183 (436)
Q Consensus 115 ~~-i~~a~~~Gi~vil~l~~~w~~~gg~-----~~y~~W~~~~--G~~---~~~~~~f~~~~~~~~~~~~~v~~iv~r~n 183 (436)
.. ++.|.+.||+||+.-.. .|+. ..||+|.... +.. ...+.-.++++-.++....+++.+++|.
T Consensus 71 ~~~l~~a~~~Gl~vil~t~P----~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~- 145 (673)
T COG1874 71 EIFLERAYKAGLYVILRTGP----TGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERL- 145 (673)
T ss_pred HHHHHHHHhcCceEEEecCC----CCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHH-
Confidence 66 99999999999998621 1111 1233333211 100 0122345678877888888888888884
Q ss_pred cccccccCCCCcEEEEEeecCCCCCCC---CChHHHHHHHHHHHHHhhccCC
Q 013811 184 TFTGIHYKDDPTIMAWELMNEPRCTSD---PSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 184 ~~tg~~yk~~p~I~~weL~NEp~~~~~---~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
|+++|+|++|.+-||-.+..+ .+...++.|+++-+..|+.++.
T Consensus 146 ------~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l~~ln~ 191 (673)
T COG1874 146 ------YGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSLDNLNE 191 (673)
T ss_pred ------hccCCceeEEEccCccCCccccccccHHHHHHHHHhCcchHHhhhh
Confidence 999999999999999988422 2345666788776666665543
|
|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.9e-10 Score=116.37 Aligned_cols=283 Identities=16% Similarity=0.192 Sum_probs=129.5
Q ss_pred hhhHHHHHHHHH-HCCCCEEEEcc-ccCCCCCCCc-cCCC--CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh
Q 013811 67 RSKVSTAFHEAA-SHGLTVARTWA-FSDGGYRPLQ-RSPG--SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK 141 (436)
Q Consensus 67 ~~~~~~~l~~l~-~~G~N~vRi~~-~~d~~~~~lq-~~pg--~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~ 141 (436)
+++++..|..++ ++|+..||+|. |+|.---..+ ...| .|| |..+|.++|...++||+.++.|.-.....
T Consensus 38 ~~~~q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~~~~~~Yn---f~~lD~i~D~l~~~g~~P~vel~f~p~~~--- 111 (486)
T PF01229_consen 38 RADWQEQLRELQEELGFRYVRFHGLFSDDMMVYSESDEDGIPPYN---FTYLDQILDFLLENGLKPFVELGFMPMAL--- 111 (486)
T ss_dssp BHHHHHHHHHHHCCS--SEEEES-TTSTTTT-EEEEETTEEEEE-----HHHHHHHHHHHHCT-EEEEEE-SB-GGG---
T ss_pred hHHHHHHHHHHHhccCceEEEEEeeccCchhhccccccCCCCcCC---hHHHHHHHHHHHHcCCEEEEEEEechhhh---
Confidence 467888888887 79999999975 4442111111 1122 166 89999999999999999999985321110
Q ss_pred hhhhhHHhhcCCC-CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEEEeecCCCCCCC---CChHHH
Q 013811 142 KQYVNWARSQGQF-LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAWELMNEPRCTSD---PSGRTI 216 (436)
Q Consensus 142 ~~y~~W~~~~G~~-~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~weL~NEp~~~~~---~~~~~~ 216 (436)
. .+.. .-......+.|.-.+.+.++++++++|.. ++ |+.+. .-..||++|||+.... .+.+.+
T Consensus 112 -------~-~~~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~---~R-YG~~ev~~W~fEiWNEPd~~~f~~~~~~~ey 179 (486)
T PF01229_consen 112 -------A-SGYQTVFWYKGNISPPKDYEKWRDLVRAFARHYI---DR-YGIEEVSTWYFEIWNEPDLKDFWWDGTPEEY 179 (486)
T ss_dssp -------B-SS--EETTTTEE-S-BS-HHHHHHHHHHHHHHHH---HH-HHHHHHTTSEEEESS-TTSTTTSGGG-HHHH
T ss_pred -------c-CCCCccccccCCcCCcccHHHHHHHHHHHHHHHH---hh-cCCccccceeEEeCcCCCcccccCCCCHHHH
Confidence 0 0100 00000111223344555555555544410 00 54321 1125899999998532 234568
Q ss_pred HHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCC--ChhHh
Q 013811 217 QAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSS--NDRDQ 294 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~--~~~~~ 294 (436)
.++++.++++||+.||+..|. +.++-. ...++ .....+|..... -.+||+|+|.|+....... .....
T Consensus 180 ~~ly~~~~~~iK~~~p~~~vG--Gp~~~~-~~~~~------~~~~l~~~~~~~-~~~DfiS~H~y~~~~~~~~~~~~~~~ 249 (486)
T PF01229_consen 180 FELYDATARAIKAVDPELKVG--GPAFAW-AYDEW------CEDFLEFCKGNN-CPLDFISFHSYGTDSAEDINENMYER 249 (486)
T ss_dssp HHHHHHHHHHHHHH-TTSEEE--EEEEET-T-THH------HHHHHHHHHHCT----SEEEEEEE-BESESE-SS-EEEE
T ss_pred HHHHHHHHHHHHHhCCCCccc--Cccccc-cHHHH------HHHHHHHHhcCC-CCCCEEEEEecccccccccchhHHhh
Confidence 889999999999999998763 322100 00000 011122333233 4579999999985432110 00011
Q ss_pred H---H-HHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccc
Q 013811 295 L---S-FLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLL 366 (436)
Q Consensus 295 ~---~-~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~ 366 (436)
+ . .+.+ +....+...+ ..++|+.++||........ .....+.+|+-. .+++... ..+.+..+|.+.
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k---~lL~~~~--~~l~~~sywt~s 323 (486)
T PF01229_consen 250 IEDSRRLFPE-LKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAK---NLLSNDG--AFLDSFSYWTFS 323 (486)
T ss_dssp B--HHHHHHH-HHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH----HHHHGG--GT-SEEEES-SB
T ss_pred hhhHHHHHHH-HHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHH---HHHHhhh--hhhhhhhccchh
Confidence 1 1 1111 2222122222 1368899999987654311 111233333222 1223321 135678899999
Q ss_pred cCCC------CCCCCCceEEeCC
Q 013811 367 TEGM------DAFRDGYEIVLSQ 383 (436)
Q Consensus 367 ~~g~------~~~~dg~~i~~~~ 383 (436)
|-.. ...-.||++....
T Consensus 324 D~Fee~~~~~~pf~ggfGLlt~~ 346 (486)
T PF01229_consen 324 DRFEENGTPRKPFHGGFGLLTKL 346 (486)
T ss_dssp S---TTSS-SSSSSS-S-SEECC
T ss_pred hhhhccCCCCCceecchhhhhcc
Confidence 8432 2234678877653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-08 Score=104.79 Aligned_cols=152 Identities=20% Similarity=0.271 Sum_probs=119.9
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+-++..|.+||+++.+..-..|+... .++.+++.++.+|+.|+|+|-+++| |+-.+|+||.|+=...-.
T Consensus 20 v~yd~~~~~idG~r~~~isGsIHY~R~------~pe~W~~~i~k~k~~Gln~IqtYVf----Wn~Hep~~g~y~FsG~~D 89 (649)
T KOG0496|consen 20 VTYDKRSLLIDGQRFILISGSIHYPRS------TPEMWPDLIKKAKAGGLNVIQTYVF----WNLHEPSPGKYDFSGRYD 89 (649)
T ss_pred EeccccceeecCCeeEEEEeccccccC------ChhhhHHHHHHHHhcCCceeeeeee----cccccCCCCcccccchhH
Confidence 788899999999999999888887754 2478999999999999999999988 666789999998766667
Q ss_pred HHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhc-CCCCCCCCCCC-CChHHHHHHHHHHHHHHhcccccc
Q 013811 113 LDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQ-GQFLTSDDDFF-RNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~-G~~~~~~~~f~-~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
|-++|.+|++.|++|+|.+- ..| ++||.+ -|.... | ..|= +|+..+++++++++.|+...+
T Consensus 90 lvkFikl~~~~GLyv~LRiGPyIcaEw-~~GG~P---~wL~~~pg------~~~Rt~nepfk~~~~~~~~~iv~~mk--- 156 (649)
T KOG0496|consen 90 LVKFIKLIHKAGLYVILRIGPYICAEW-NFGGLP---WWLRNVPG------IVFRTDNEPFKAEMERWTTKIVPMMK--- 156 (649)
T ss_pred HHHHHHHHHHCCeEEEecCCCeEEecc-cCCCcc---hhhhhCCc------eEEecCChHHHHHHHHHHHHHHHHHH---
Confidence 77889999999999999875 335 358875 343321 2 1222 367888999999999998766
Q ss_pred ccccCCCCcEEEEEeecCCCC
Q 013811 187 GIHYKDDPTIMAWELMNEPRC 207 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~ 207 (436)
..-+++---|++-++.||-..
T Consensus 157 ~L~~~qGGPIIl~QIENEYG~ 177 (649)
T KOG0496|consen 157 KLFASQGGPIILVQIENEYGN 177 (649)
T ss_pred HHHhhcCCCEEEEEeechhhH
Confidence 344666666888999999973
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.9e-08 Score=99.37 Aligned_cols=243 Identities=20% Similarity=0.249 Sum_probs=146.5
Q ss_pred HHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCC
Q 013811 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQ 153 (436)
Q Consensus 74 l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~ 153 (436)
...+-..-+|.+=. -.+..|..+++.+|.|+ ++..|.+++.|+++||.|---..- |.. +.|.|....
T Consensus 27 ~~~~~~~~Fn~~t~--eN~~Kw~~~e~~~g~~~---~~~~D~~~~~a~~~g~~vrGH~Lv-W~~-----~~P~w~~~~-- 93 (320)
T PF00331_consen 27 YRELFAKHFNSVTP--ENEMKWGSIEPEPGRFN---FESADAILDWARENGIKVRGHTLV-WHS-----QTPDWVFNL-- 93 (320)
T ss_dssp HHHHHHHH-SEEEE--SSTTSHHHHESBTTBEE----HHHHHHHHHHHHTT-EEEEEEEE-ESS-----SS-HHHHTS--
T ss_pred HHHHHHHhCCeeee--ccccchhhhcCCCCccC---ccchhHHHHHHHhcCcceeeeeEE-Ecc-----cccceeeec--
Confidence 44444556887664 12234667788999888 888999999999999998522110 321 346777532
Q ss_pred CCCCCCCCCCCh---HHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHH-----HHHHH
Q 013811 154 FLTSDDDFFRNP---VVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTI-----QAWIT 221 (436)
Q Consensus 154 ~~~~~~~f~~~~---~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~-----~~w~~ 221 (436)
.-++.. ..++...++++.+++| |++...|.+|++.|||-..... ....+ ..++.
T Consensus 94 ------~~~~~~~~~~~~~~l~~~I~~v~~~--------y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~ 159 (320)
T PF00331_consen 94 ------ANGSPDEKEELRARLENHIKTVVTR--------YKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIA 159 (320)
T ss_dssp ------TTSSBHHHHHHHHHHHHHHHHHHHH--------TTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHH
T ss_pred ------cCCCcccHHHHHHHHHHHHHHHHhH--------hccccceEEEEEeeecccCCCccccccCChhhhcccHhHHH
Confidence 012222 3788999999999999 9988889999999999876420 00111 24778
Q ss_pred HHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceE--EeecCCCCCCCCCChhHhHHH
Q 013811 222 EMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFA--TVHSYPDQWLSSSNDRDQLSF 297 (436)
Q Consensus 222 ~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~--s~H~Y~~~w~~~~~~~~~~~~ 297 (436)
.+.+..|+.||+....+.. |+...+.. . ..-..++..+ ..-.||-+ .-|+-....
T Consensus 160 ~aF~~A~~~~P~a~L~~ND---y~~~~~~k----~--~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~------------ 218 (320)
T PF00331_consen 160 DAFRAAREADPNAKLFYND---YNIESPAK----R--DAYLNLVKDLKARGVPIDGIGLQSHFDAGYP------------ 218 (320)
T ss_dssp HHHHHHHHHHTTSEEEEEE---SSTTSTHH----H--HHHHHHHHHHHHTTHCS-EEEEEEEEETTSS------------
T ss_pred HHHHHHHHhCCCcEEEecc---ccccchHH----H--HHHHHHHHHHHhCCCccceechhhccCCCCC------------
Confidence 8899999999998776643 22211100 0 0000111111 11126654 445543321
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 298 LNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG---YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g---~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+-|.+.++.... ++.||.|+|+.+...... ...+.++++++.++..+++.... .+.|.++|.+.|.
T Consensus 219 -~~~i~~~l~~~~~-~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~--~v~git~Wg~~D~ 288 (320)
T PF00331_consen 219 -PEQIWNALDRFAS-LGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPA--AVEGITWWGFTDG 288 (320)
T ss_dssp -HHHHHHHHHHHHT-TTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHC--TEEEEEESSSBTT
T ss_pred -HHHHHHHHHHHHH-cCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCcc--CCCEEEEECCCCC
Confidence 1224445555555 899999999998876421 12567778888888777665211 5889999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.1e-07 Score=94.08 Aligned_cols=118 Identities=19% Similarity=0.303 Sum_probs=85.6
Q ss_pred EEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHH
Q 013811 40 FLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAE 119 (436)
Q Consensus 40 f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~ 119 (436)
|.+||.|+++.|.|.+-..... +-.+.+.++-.|+..++.|+|++|+|.. |.|.. |++-+.
T Consensus 330 fkin~~pvflkg~nwip~s~f~-dr~t~~~~~~LL~Sv~e~~MN~lRVWGG------------GvYEs------d~FY~l 390 (867)
T KOG2230|consen 330 FKINDEPVFLKGTNWIPVSMFR-DRENIAKTEFLLDSVAEVGMNMLRVWGG------------GVYES------DYFYQL 390 (867)
T ss_pred EEEcCcEEEeecCCccChHHHH-hhHHHHHHHHHHHHHHHhCcceEEEecC------------ccccc------hhHHHH
Confidence 4579999999999943222222 2234467788899999999999999863 22332 678899
Q ss_pred HHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEE
Q 013811 120 ARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~w 199 (436)
|.+.||.| |+++ .+ ++ .-+-+|.+.....+.-++.=+.| .+.||+|+.|
T Consensus 391 ad~lGilV-------WQD~----MF---AC---------AlYPt~~eFl~sv~eEV~yn~~R--------ls~HpSviIf 439 (867)
T KOG2230|consen 391 ADSLGILV-------WQDM----MF---AC---------ALYPTNDEFLSSVREEVRYNAMR--------LSHHPSVIIF 439 (867)
T ss_pred hhhcccee-------hhhh----HH---Hh---------hcccCcHHHHHHHHHHHHHHHHh--------hccCCeEEEE
Confidence 99999998 6553 11 11 11235666666677788888889 9999999999
Q ss_pred EeecCCCC
Q 013811 200 ELMNEPRC 207 (436)
Q Consensus 200 eL~NEp~~ 207 (436)
.--||-..
T Consensus 440 sgNNENEa 447 (867)
T KOG2230|consen 440 SGNNENEA 447 (867)
T ss_pred eCCCccHH
Confidence 99999864
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.7e-05 Score=72.61 Aligned_cols=202 Identities=19% Similarity=0.252 Sum_probs=126.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
.+++..||+.++..+. .||++. +| -..|..++.+|.+.|+++++-+.-.
T Consensus 62 a~~~~sDLe~l~~~t~-~IR~Y~-sD-----------------Cn~le~v~pAa~~~g~kv~lGiw~t------------ 110 (305)
T COG5309 62 ADQVASDLELLASYTH-SIRTYG-SD-----------------CNTLENVLPAAEASGFKVFLGIWPT------------ 110 (305)
T ss_pred HHHHHhHHHHhccCCc-eEEEee-cc-----------------chhhhhhHHHHHhcCceEEEEEeec------------
Confidence 3789999999999998 999976 33 2335678899999999999876210
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHH-HHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHH
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYK-NLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS 225 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~-~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~ 225 (436)
| +...... ..+.++.. |...+.|....++||.-...+.+..++.+.+.....
T Consensus 111 -----------------d-d~~~~~~~til~ay~~---------~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrs 163 (305)
T COG5309 111 -----------------D-DIHDAVEKTILSAYLP---------YNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRS 163 (305)
T ss_pred -----------------c-chhhhHHHHHHHHHhc---------cCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHH
Confidence 0 0111111 12222222 677788999999999988777678889999999999
Q ss_pred HhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHH
Q 013811 226 YVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTH 305 (436)
Q Consensus 226 ~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~ 305 (436)
++++.+-+-+|++-. .| .. ...|| + .+...||+..|.-|. |.........-.|+.+-++ .
T Consensus 164 av~~agy~gpV~T~d-sw-~~-----~~~np------~-----l~~~SDfia~N~~aY-wd~~~~a~~~~~f~~~q~e-~ 223 (305)
T COG5309 164 AVKEAGYDGPVTTVD-SW-NV-----VINNP------E-----LCQASDFIAANAHAY-WDGQTVANAAGTFLLEQLE-R 223 (305)
T ss_pred HHHhcCCCCceeecc-cc-ee-----eeCCh------H-----Hhhhhhhhhcccchh-ccccchhhhhhHHHHHHHH-H
Confidence 999888877776432 22 11 01133 1 234557776665554 5543222222233322222 2
Q ss_pred HHHHHHhcCCcEEEEecCCCCCCC--C---CChHHHHHHHHHHHHHH
Q 013811 306 IQDAEHILRKPILLAEFGKSRKDP--G---YSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 306 ~~~a~~~~~kPv~i~EfG~~~~~~--g---~~~~~r~~~~~~~~~~i 347 (436)
++-+.. .+||++|+|.|.+.++. | .+.+.+..+++.++..+
T Consensus 224 vqsa~g-~~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~~ 269 (305)
T COG5309 224 VQSACG-TKKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNAL 269 (305)
T ss_pred HHHhcC-CCccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhhh
Confidence 333322 34999999999998752 1 25567777777666543
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.7e-06 Score=78.80 Aligned_cols=116 Identities=23% Similarity=0.384 Sum_probs=84.3
Q ss_pred CCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc-CCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHH
Q 013811 94 GYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN-NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYK 172 (436)
Q Consensus 94 ~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~-~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~ 172 (436)
.|..+++++|.|+ |+.-|.+++-|+++||.+-- |+ .|.. +.+.|... ++ .+-+...+.++
T Consensus 68 Kwe~i~p~~G~f~---Fe~AD~ia~FAr~h~m~lhG--HtLvW~~-----q~P~W~~~--------~e-~~~~~~~~~~e 128 (345)
T COG3693 68 KWEAIEPERGRFN---FEAADAIANFARKHNMPLHG--HTLVWHS-----QVPDWLFG--------DE-LSKEALAKMVE 128 (345)
T ss_pred ccccccCCCCccC---ccchHHHHHHHHHcCCeecc--ceeeecc-----cCCchhhc--------cc-cChHHHHHHHH
Confidence 4778899999998 88889999999999998621 11 0321 45666532 11 34467888999
Q ss_pred HHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-------ChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 173 NLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-------SGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 173 ~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-------~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
+++..++.| ||+. +.+|++.|||-..... .+-.-.+|++......|+.||.....+
T Consensus 129 ~hI~tV~~r--------Ykg~--~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~ 191 (345)
T COG3693 129 EHIKTVVGR--------YKGS--VASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVI 191 (345)
T ss_pred HHHHHHHHh--------ccCc--eeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEe
Confidence 999999999 9997 8899999999873221 111234567777888899999876554
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.50 E-value=3e-06 Score=80.31 Aligned_cols=143 Identities=20% Similarity=0.165 Sum_probs=79.9
Q ss_pred EEEEEeecCCCCCCC--CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC-CCC
Q 013811 196 IMAWELMNEPRCTSD--PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL-IPG 272 (436)
Q Consensus 196 I~~weL~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~-~~~ 272 (436)
+-.+..+|||..... .+.+...+..+++.+.+|. ++..|......+-+...+. +..+-.+|..... .-.
T Consensus 66 ~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~sPa~~~~~~~~~~------g~~Wl~~F~~~~~~~~~ 137 (239)
T PF11790_consen 66 SKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLGSPAVAFTNGGTPG------GLDWLSQFLSACARGCR 137 (239)
T ss_pred ccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEECCeecccCCCCCC------ccHHHHHHHHhcccCCC
Confidence 345678899998653 2445555555566666664 4333322111111100000 0112234555443 458
Q ss_pred cceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 013811 273 IDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAK 352 (436)
Q Consensus 273 iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~ 352 (436)
+||+++|.|... ... +..+++...+.++|||+|||||........+.+++..|+++++..+-+
T Consensus 138 ~D~iavH~Y~~~----------~~~----~~~~i~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~~~~~~ld~--- 200 (239)
T PF11790_consen 138 VDFIAVHWYGGD----------ADD----FKDYIDDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLRQALPWLDS--- 200 (239)
T ss_pred ccEEEEecCCcC----------HHH----HHHHHHHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 999999999322 112 233444444457899999999987643345677888888888765422
Q ss_pred cCCCccceeecc
Q 013811 353 RGGAAAGGLFWQ 364 (436)
Q Consensus 353 ~~~~~~G~~~W~ 364 (436)
...+.++.+..
T Consensus 201 -~~~VeryawF~ 211 (239)
T PF11790_consen 201 -QPYVERYAWFG 211 (239)
T ss_pred -CCCeeEEEecc
Confidence 24556666555
|
|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.9e-06 Score=72.51 Aligned_cols=139 Identities=18% Similarity=0.296 Sum_probs=95.9
Q ss_pred chhhhHHHHHHHHHHCCCCEEEE-ccccCC-C-CC-CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCC
Q 013811 65 SQRSKVSTAFHEAASHGLTVART-WAFSDG-G-YR-PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGG 140 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi-~~~~d~-~-~~-~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg 140 (436)
.+.++++++|+.|+++|+++|=+ |.--.+ . ++ .+ .++.+....-+.|+.++++|+++||+|++.|...-
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~--~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~----- 89 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKL--SPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDP----- 89 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccc--cCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCc-----
Confidence 34588999999999999999855 221111 0 11 11 12334444567889999999999999999985321
Q ss_pred hhhhhhHHhhcCCCCCCCCCCCCChHH-HHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHH
Q 013811 141 KKQYVNWARSQGQFLTSDDDFFRNPVV-KGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAW 219 (436)
Q Consensus 141 ~~~y~~W~~~~G~~~~~~~~f~~~~~~-~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w 219 (436)
.|... .+++. .+.-+..++++.++ |++||++-+|=|-.|+..... ...+.
T Consensus 90 -----~~w~~------------~~~~~~~~~~~~v~~el~~~--------yg~h~sf~GWYip~E~~~~~~----~~~~~ 140 (166)
T PF14488_consen 90 -----DYWDQ------------GDLDWEAERNKQVADELWQR--------YGHHPSFYGWYIPYEIDDYNW----NAPER 140 (166)
T ss_pred -----hhhhc------------cCHHHHHHHHHHHHHHHHHH--------HcCCCCCceEEEecccCCccc----chHHH
Confidence 11110 12222 22234577788888 999999999999999987642 33556
Q ss_pred HHHHHHHhhccCCCCEEEeC
Q 013811 220 ITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 220 ~~~~~~~Ir~~Dp~~lV~vG 239 (436)
.+.+.+++|++.|+.+|++.
T Consensus 141 ~~~l~~~lk~~s~~~Pv~IS 160 (166)
T PF14488_consen 141 FALLGKYLKQISPGKPVMIS 160 (166)
T ss_pred HHHHHHHHHHhCCCCCeEEe
Confidence 68888999999998888864
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.3e-08 Score=101.30 Aligned_cols=329 Identities=23% Similarity=0.326 Sum_probs=178.8
Q ss_pred cCCCCCEEeeCCeEE-ECCeE------EEEEeecccccccccCCc--chhhhHHHHHHHHHHCCCCEEEE-ccc---cCC
Q 013811 27 EAGDGFIRTRGSHFL-LNGNL------YFANGFNAYWLMYVASDP--SQRSKVSTAFHEAASHGLTVART-WAF---SDG 93 (436)
Q Consensus 27 ~~~~~fv~v~g~~f~-~nGkp------~~~~G~N~~~~~~~~~~~--~~~~~~~~~l~~l~~~G~N~vRi-~~~---~d~ 93 (436)
-+..+||.++..++. |||++ +...|.|.+++....... .+-..+...+..++.||....|| |.. +|.
T Consensus 32 le~a~~vg~k~lR~fiLDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvlitlivg~~hmgg~Nw~Ipwag~~~pdn 111 (587)
T COG3934 32 LEPAGFVGVKDLRLFILDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIVGLKHMGGTNWRIPWAGEQSPDN 111 (587)
T ss_pred cccccCccceeEEEEEecCcchhhhhceecccccHHHHHHHhhhcccCcceEEEEEeecccccCcceeEeecCCCCCccc
Confidence 355678999887755 89999 677777764443321100 01122223333344444444444 110 000
Q ss_pred -CCCCCccCCC-CCChhhhh--hHHHHHHHHHHcCCE---EEEecccCCCCCCChhhhhhHHhhc-----CCCCC-----
Q 013811 94 -GYRPLQRSPG-SYNEQMFK--GLDFVIAEARKYGIK---LILSLANNYDSFGGKKQYVNWARSQ-----GQFLT----- 156 (436)
Q Consensus 94 -~~~~lq~~pg-~~~~~~l~--~lD~~i~~a~~~Gi~---vil~l~~~w~~~gg~~~y~~W~~~~-----G~~~~----- 156 (436)
-+...-..|+ .|.++.+. ++|-.|..-.-.+.- ...+..+.|++.+++..|.+|.... |.+..
T Consensus 112 ~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hlvsvGD~~sp~~~~ 191 (587)
T COG3934 112 VIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHLVSVGDPASPWPQY 191 (587)
T ss_pred cccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCeeecCCcCCccccc
Confidence 0000000111 23444444 444455554555552 2234445677788999999987531 22211
Q ss_pred --CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----ChHHHHHHHHHHH-----
Q 013811 157 --SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----SGRTIQAWITEMA----- 224 (436)
Q Consensus 157 --~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----~~~~~~~w~~~~~----- 224 (436)
....++.|-.....|..|...++.|+.+.+|.+|.+.|++++|...|++...... .....+.|+..+.
T Consensus 192 ~pyN~r~~vDya~~hLY~hyd~sl~~r~s~~yg~~~l~i~~~~g~~pV~leefGfsta~g~e~s~ayfiw~~lal~~ggd 271 (587)
T COG3934 192 APYNARFYVDYAANHLYRHYDTSLVSRVSTVYGKPYLDIPTIMGWQPVNLEEFGFSTAFGQENSPAYFIWIRLALDTGGD 271 (587)
T ss_pred CCcccceeeccccchhhhhccCChhheeeeeecchhhccchhcccceeeccccCCcccccccccchhhhhhhhHHhhcCC
Confidence 1123344555566677777788899999999999999999999999999876532 2345667766521
Q ss_pred -HHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCC--Ch-----hHhHH
Q 013811 225 -SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSS--ND-----RDQLS 296 (436)
Q Consensus 225 -~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~--~~-----~~~~~ 296 (436)
+.|.-++--|+.+.+++..|.+... . --.++....+.+|+-++|..+..|..-. ++ +...-
T Consensus 272 GaLiwclsdf~~gsdd~ey~w~p~el---------~--fgiIradgpek~~a~~~~~fsn~~kdI~~~Sfq~p~~e~~ei 340 (587)
T COG3934 272 GALIWCLSDFHLGSDDSEYTWGPMEL---------E--FGIIRADGPEKIDAMTLHIFSNNWKDISMCSFQPPTYEAGEI 340 (587)
T ss_pred ceEEEEecCCccCCCCCCCccccccc---------e--eeeecCCCchhhhHHHHHHhccccceeeeecccCccccccee
Confidence 1233333333343333322221110 0 0012334456677778888887664321 00 11000
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 297 FLNNWLDTHIQDAEHILRKPILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 297 ~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.-..++++|+..+.+ +++|+++.+++..-.. ++.++..|+..++.+++.-.-.+.-++.-+|...|.+..
T Consensus 341 kp~~~va~~~fv~e~-~~~~Lf~rv~nl~f~~~~~~~gqpt~~rd~d~~~~l~d~kllmipsgpt~g~Ttw~~ll 414 (587)
T COG3934 341 KPRDYVAQHIFVAER-LNKPLFIRVFNLIFDGRQFTPGQPTTYRDRDYKTMLDDAKLLMIPSGPTAGVTTWAWLL 414 (587)
T ss_pred cchHhhhhceecHhh-hccchhhhcchhHhhhhhhcCCCceEEeccchhhcCCchhheeecCCcccchhHHHHHh
Confidence 112346677777777 8999999999976542 455556677777765543222222234667888888864
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0011 Score=66.13 Aligned_cols=266 Identities=18% Similarity=0.256 Sum_probs=112.4
Q ss_pred HHCCCCEEEEccccC----C-------CC---CCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 78 ASHGLTVARTWAFSD----G-------GY---RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 78 ~~~G~N~vRi~~~~d----~-------~~---~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
+-+|+|.+|.-+-.- + .| +.+.+..|.||-+.=..=..++.+|+++|+..++-+.|..
T Consensus 57 ~GlGLSI~RyNIGgGs~~~~d~~~i~~~~rr~e~f~~~dg~yDW~~D~gQrwfL~~Ak~rGV~~f~aFSNSP-------- 128 (384)
T PF14587_consen 57 KGLGLSIWRYNIGGGSAEQGDSSGIRDPWRRAESFLPADGSYDWDADAGQRWFLKAAKERGVNIFEAFSNSP-------- 128 (384)
T ss_dssp -S---S-EEEE---STTTTTTSS--SSSTT----SB-TTS-B-TTSSHHHHHHHHHHHHTT---EEEE-SSS--------
T ss_pred CCceeeeeeeccccCCcccccCccCCCcccCCccccCCCCCcCCCCCHHHHHHHHHHHHcCCCeEEEeecCC--------
Confidence 469999999955310 0 01 1233445666632222334689999999999888766542
Q ss_pred hhhHHhhcCCCCCCC-CCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC--------CCh
Q 013811 144 YVNWARSQGQFLTSD-DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD--------PSG 213 (436)
Q Consensus 144 y~~W~~~~G~~~~~~-~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~--------~~~ 213 (436)
|-|+...|...... ..---.++..+.|.+|+..++++ |+.+ =.|-..+.+|||..... .+.
T Consensus 129 -P~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~--------~~~~GI~f~~IsP~NEP~~~W~~~~QEG~~~~~ 199 (384)
T PF14587_consen 129 -PWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADVVKH--------YKKWGINFDYISPFNEPQWNWAGGSQEGCHFTN 199 (384)
T ss_dssp --GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHH--------HHCTT--EEEEE--S-TTS-GG--SS-B----H
T ss_pred -CHHHhcCCCCCCCCccccccChhHHHHHHHHHHHHHHH--------HHhcCCccceeCCcCCCCCCCCCCCcCCCCCCH
Confidence 22333223211111 11112356788999999999999 7554 24667889999986521 134
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEeCCCccc----CCCC--Ccc-----ccCCCCCcccchhhhhcCCCCc-ceEEeecC
Q 013811 214 RTIQAWITEMASYVKSIDRNHLLEAGLEGFY----GQST--PQR-----KRVNPNLDIGTDFVANNLIPGI-DFATVHSY 281 (436)
Q Consensus 214 ~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~----~~~~--~~~-----~~~np~~~~g~df~~~~~~~~i-D~~s~H~Y 281 (436)
+.....++.+.+.+++...+..|+++.++-+ .... +.. .-++|. ...++. ..++| .+++-|.|
T Consensus 200 ~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~---s~~yi~--~l~~v~~~i~~HsY 274 (384)
T PF14587_consen 200 EEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPD---SSTYIG--DLPNVPNIISGHSY 274 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTT---STT--T--T-TTEEEEEEE--T
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhhhhhHHhhcCCC---chhhhh--ccccchhheeeccc
Confidence 6778889999999999888888887665432 2100 000 001111 011111 23444 37899999
Q ss_pred CCCCCCCCChhHhHHHHHHHHHHHHHHHHHhc--CCcEEEEecCCCCCCCC---CChHHHHHHHHHHH---HHHHHHhhc
Q 013811 282 PDQWLSSSNDRDQLSFLNNWLDTHIQDAEHIL--RKPILLAEFGKSRKDPG---YSTYQRDVMFNTVY---YKIYSSAKR 353 (436)
Q Consensus 282 ~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~--~kPv~i~EfG~~~~~~g---~~~~~r~~~~~~~~---~~i~~~~~~ 353 (436)
|...+ ...+.- +++.+....+.. +..++.+||.+-.+..+ .....|+-.++..+ ..|..-+-
T Consensus 275 ---wt~~~--~~~l~~----~R~~~~~~~~~~~~~~~~wqtE~~il~~~~~~~~~~g~~~~~~m~~aLy~arviH~DL~- 344 (384)
T PF14587_consen 275 ---WTDSP--WDDLRD----IRKQLADKLDKYSPGLKYWQTEYCILGDNYEIIEGGGYDRDLGMDTALYVARVIHNDLT- 344 (384)
T ss_dssp ---T-SSS--HHHHHH----HHHHHHHHHHTTSS--EEEE----S----TTT-SSS-HHHHHHH--HHHHHHHHHHHHH-
T ss_pred ---ccCCC--HHHHHH----HHHHHHHHHHhhCcCCceeeeeeeeccCCcccccCCCcccchhHHHHHHHHHHHHhhhh-
Confidence 65332 111222 223333332335 78899999998766421 11122444443222 11222222
Q ss_pred CCCccceeecccccCCCCCCCCCc
Q 013811 354 GGAAAGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 354 ~~~~~G~~~W~~~~~g~~~~~dg~ 377 (436)
......|-+|.-... ..|.||.
T Consensus 345 ~anassW~wW~a~~~--~~ykdgl 366 (384)
T PF14587_consen 345 YANASSWQWWTAISP--YDYKDGL 366 (384)
T ss_dssp TS--SEEEEEESEES--S--SSSS
T ss_pred hcccchhHHHHHhcc--ccccCce
Confidence 125667778877654 2467885
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00099 Score=64.72 Aligned_cols=238 Identities=17% Similarity=0.176 Sum_probs=119.2
Q ss_pred hHHHHHHH-HHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhH
Q 013811 69 KVSTAFHE-AASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNW 147 (436)
Q Consensus 69 ~~~~~l~~-l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W 147 (436)
.++..|.. .-++|+..+|+.+-+...+ + .|.+|.. ...| ..-.-+..+|++|+-+..+. |.|
T Consensus 66 ~l~t~Fgng~~~lg~si~Rv~I~~ndfs--l---~g~~d~w-~kel-s~Ak~~in~g~ivfASPWsp----------Pa~ 128 (433)
T COG5520 66 QLETLFGNGANQLGFSILRVPIDSNDFS--L---GGSADNW-YKEL-STAKSAINPGMIVFASPWSP----------PAS 128 (433)
T ss_pred HHHHHhcCCccccCceEEEEEecccccc--c---CCCcchh-hhhc-ccchhhcCCCcEEEecCCCC----------chh
Confidence 34444433 2358999999976422111 1 1222211 1111 11123678999998877432 344
Q ss_pred HhhcCCCCCC-CCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCCC-----ChHHHHHHH
Q 013811 148 ARSQGQFLTS-DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSDP-----SGRTIQAWI 220 (436)
Q Consensus 148 ~~~~G~~~~~-~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~~-----~~~~~~~w~ 220 (436)
++..+.-... ... -.++.-..|.+++...|.. ++++ -.+-+..+.|||....+. +.+...+++
T Consensus 129 Mktt~~~ngg~~g~--Lk~e~Ya~yA~~l~~fv~~--------m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~rF~ 198 (433)
T COG5520 129 MKTTNNRNGGNAGR--LKYEKYADYADYLNDFVLE--------MKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELRFM 198 (433)
T ss_pred hhhccCcCCccccc--cchhHhHHHHHHHHHHHHH--------HHhCCCceeEEeeccCCcccCCCCcccccHHHHHHHH
Confidence 4432210000 001 1234556677777777777 7776 457789999999876321 334444444
Q ss_pred HHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHH
Q 013811 221 TEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNN 300 (436)
Q Consensus 221 ~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~ 300 (436)
+ ++.+++..+.-|.+-. .+. ++|.+.. .-+....+..++|+++.|.|...-... + .
T Consensus 199 ~---qyl~si~~~~rV~~pe-s~~---------~~~~~~d-p~lnDp~a~a~~~ilg~H~Ygg~v~~~---p-------~ 254 (433)
T COG5520 199 R---QYLASINAEMRVIIPE-SFK---------DLPNMSD-PILNDPKALANMDILGTHLYGGQVSDQ---P-------Y 254 (433)
T ss_pred H---HhhhhhccccEEecch-hcc---------ccccccc-ccccCHhHhcccceeEeeecccccccc---h-------h
Confidence 3 3344433333333221 111 1121100 001112345789999999997652211 0 0
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.+ ..+. ..+|-|+++|.=....+++..+ | +.+. +...+.....++ +..|+.+|-+..
T Consensus 255 ~l----ak~~-~~gKdlwmte~y~~esd~~s~d--r-~~~~-~~~hi~~gm~~g-g~~ayv~W~i~~ 311 (433)
T COG5520 255 PL----AKQK-PAGKDLWMTECYPPESDPNSAD--R-EALH-VALHIHIGMTEG-GFQAYVWWNIRL 311 (433)
T ss_pred hH----hhCC-CcCCceEEeecccCCCCCCcch--H-HHHH-HHHHHHhhcccc-CccEEEEEEEee
Confidence 01 1111 2489999999877666554332 2 2222 333343333443 678999998864
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0031 Score=62.11 Aligned_cols=207 Identities=18% Similarity=0.313 Sum_probs=112.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCC--CC-CCccC----CCC-CChhhhhhHHHHHHHHHHcCCEEEEecc-cC-C
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGG--YR-PLQRS----PGS-YNEQMFKGLDFVIAEARKYGIKLILSLA-NN-Y 135 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~--~~-~lq~~----pg~-~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~-w 135 (436)
+++.+++.|+.|+++|+|+|=+-+...|. |+ .+.|. .|. .....++-|..+|++|+++||.|.--+- .. .
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~ 96 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNA 96 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCC
Confidence 45789999999999999988664433221 21 12221 111 1112477899999999999999976541 10 0
Q ss_pred CCCCC-hhhhhhHHh--hcCCCCC----CCCCCCC---ChHHHHHHHHHHHHHHhccccccccccCCC---CcEEEEEe-
Q 013811 136 DSFGG-KKQYVNWAR--SQGQFLT----SDDDFFR---NPVVKGYYKNLIKTVLNRYNTFTGIHYKDD---PTIMAWEL- 201 (436)
Q Consensus 136 ~~~gg-~~~y~~W~~--~~G~~~~----~~~~f~~---~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~---p~I~~weL- 201 (436)
...+. ....+.|.. ..|.... .....|- +|++++...+.+++||++-. +.|+.+-+. |...+++.
T Consensus 97 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIhlDdy~yp~~~~g~~~~ 175 (311)
T PF02638_consen 97 PDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIHLDDYFYPPPSFGYDFP 175 (311)
T ss_pred CchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEEecccccccccCCCCCc
Confidence 00000 112344422 1111110 1223333 57899999999999999821 333322211 11000000
Q ss_pred ----e-c----CCCC-CCC-----CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 202 ----M-N----EPRC-TSD-----PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 202 ----~-N----Ep~~-~~~-----~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
. . +|.. ..+ .-.+.+..+++++.+.||+++|+..+++...|.++.+. +-.+ +|...
T Consensus 176 ~~~~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp~g~~~~~y------~~~~---qD~~~ 246 (311)
T PF02638_consen 176 DVAAYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISPFGIWNSAY------DDYY---QDWRN 246 (311)
T ss_pred cHHHHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeecchhhhh------hhee---ccHHH
Confidence 0 0 0000 000 01356777889999999999999999876555443211 1111 23333
Q ss_pred hcCCCCcceEEeecCC
Q 013811 267 NNLIPGIDFATVHSYP 282 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~ 282 (436)
-.....+|++.+-.|-
T Consensus 247 W~~~G~iD~i~Pq~Y~ 262 (311)
T PF02638_consen 247 WLKEGYIDYIVPQIYW 262 (311)
T ss_pred HHhcCCccEEEeeecc
Confidence 3345789999999993
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.083 Score=51.91 Aligned_cols=272 Identities=16% Similarity=0.226 Sum_probs=139.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCC---CCC---CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGG---YRP---LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~---~~~---lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~g 139 (436)
+.+.+++.|+.+++.|+|+|=|=+-.|.+ |+. +....|. .......+..+++.++++|||+|--+..+-+..-
T Consensus 11 ~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga-~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~l 89 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGA-VKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVL 89 (316)
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhccc-ccccccCHHHHHHHHHHCCCEEEEEEEEecChHH
Confidence 34689999999999999999985544322 110 1011121 1122466889999999999999888765432211
Q ss_pred ChhhhhhHHhh--cCCCC-CCCCCCCCC---hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCC-------
Q 013811 140 GKKQYVNWARS--QGQFL-TSDDDFFRN---PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR------- 206 (436)
Q Consensus 140 g~~~y~~W~~~--~G~~~-~~~~~f~~~---~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~------- 206 (436)
.. ..+.|+.. .|... .....-|.| ++++++..+..+++++. .+.. |. ++-.==|.
T Consensus 90 a~-~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFdE--------Iq-fDYIRFP~~~~~~~l 157 (316)
T PF13200_consen 90 AE-AHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKL--GFDE--------IQ-FDYIRFPDEGRLSGL 157 (316)
T ss_pred hh-hChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CCCE--------EE-eeeeecCCCCccccc
Confidence 10 12445431 12111 112233554 46667667777776653 1111 11 22111111
Q ss_pred -CCCCC----ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecC
Q 013811 207 -CTSDP----SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSY 281 (436)
Q Consensus 207 -~~~~~----~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y 281 (436)
..... ..+.+..+++.+.+.++..+ ..|++..-|+-.... .....|+++.. ..+.+|+++.=.|
T Consensus 158 ~y~~~~~~~~r~~aI~~Fl~~a~~~l~~~~--v~vSaDVfG~~~~~~-------~~~~iGQ~~~~--~a~~vD~IsPMiY 226 (316)
T PF13200_consen 158 DYSENDTEESRVDAITDFLAYAREELHPYG--VPVSADVFGYVAWSP-------DDMGIGQDFEK--IAEYVDYISPMIY 226 (316)
T ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHhHcC--CCEEEEecccccccC-------CCCCcCCCHHH--HhhhCCEEEeccc
Confidence 10000 13578889999999888764 566654433211100 01235677654 3578999999999
Q ss_pred CCCCCCCC-----ChhHhHHHHHHHHHHHHHHHHHhcCCcE---EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhc
Q 013811 282 PDQWLSSS-----NDRDQLSFLNNWLDTHIQDAEHILRKPI---LLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKR 353 (436)
Q Consensus 282 ~~~w~~~~-----~~~~~~~~~~~~i~~~~~~a~~~~~kPv---~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~ 353 (436)
|.+|.++. +..+..+.....+....+......++|+ +|.-|-...... .-..+-.+..+.-+.++.++
T Consensus 227 PSh~~~g~~g~~~P~~~PY~~v~~~~~~~~~~~~~~~~~~~~RPWlQ~Ft~~~~~~-~~~~Yg~~ev~aQI~A~~d~--- 302 (316)
T PF13200_consen 227 PSHYGPGFFGIDKPDLEPYEIVYRSLKRAKERLRGLEGPAIIRPWLQDFTASWLGK-NYKEYGPEEVRAQIQALKDA--- 302 (316)
T ss_pred ccccCcccCCCCCcccChHHHHHHHHHHHHHHhhcCCCCCeEeccccccccccccc-CccccCHHHHHHHHHHHHHc---
Confidence 99987641 1112233344444433333222001222 345554432111 00112223333333444333
Q ss_pred CCCccceeeccccc
Q 013811 354 GGAAAGGLFWQLLT 367 (436)
Q Consensus 354 ~~~~~G~~~W~~~~ 367 (436)
+..||++|.-..
T Consensus 303 --g~~~~llWna~n 314 (316)
T PF13200_consen 303 --GIEGWLLWNASN 314 (316)
T ss_pred --CCCeEEEECCCC
Confidence 788999998653
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.021 Score=59.77 Aligned_cols=253 Identities=17% Similarity=0.183 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcccc-CC---CCCCCccCCC-----CCC--hhhhhhHHHHHHHHHHc--CCEEEEecccC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFS-DG---GYRPLQRSPG-----SYN--EQMFKGLDFVIAEARKY--GIKLILSLANN 134 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~-d~---~~~~lq~~pg-----~~~--~~~l~~lD~~i~~a~~~--Gi~vil~l~~~ 134 (436)
+.++..|. =..+|++.+|+.+.+ |. .| .+...|+ .|+ .+-.+..=-+|.+|.+. +|+++.+.
T Consensus 101 ~ll~~~F~-~~G~g~s~~R~pIgssDfs~~~Y-ty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSp--- 175 (496)
T PF02055_consen 101 ELLRSLFS-EDGIGYSLLRVPIGSSDFSTRPY-TYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASP--- 175 (496)
T ss_dssp HHHHHHHS-TTTT---EEEEEES--SSSSS----ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEE---
T ss_pred HHHHHHhh-cCCceEEEEEeeccCcCCcCCcc-cccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEec---
Confidence 33555555 245899999997642 21 11 1111222 122 11111112355555443 58888776
Q ss_pred CCCCCChhhhhhHHhhcCCCCCCCCCCCC---ChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC
Q 013811 135 YDSFGGKKQYVNWARSQGQFLTSDDDFFR---NPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD 210 (436)
Q Consensus 135 w~~~gg~~~y~~W~~~~G~~~~~~~~f~~---~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~ 210 (436)
|.. |.|++..+.-.. ..... .++..+.|.+|+...++. |+.+ =.|-+..+.|||.....
T Consensus 176 WSp-------P~WMKtn~~~~g--~g~l~g~~~~~y~~~yA~Y~vkfi~a--------Y~~~GI~i~aiT~QNEP~~~~~ 238 (496)
T PF02055_consen 176 WSP-------PAWMKTNGSMNG--GGSLKGSLGDEYYQAYADYFVKFIQA--------YKKEGIPIWAITPQNEPDNGSD 238 (496)
T ss_dssp S----------GGGBTTSSSCS--S-BBSCGTTSHHHHHHHHHHHHHHHH--------HHCTT--ESEEESSSSCCGGGS
T ss_pred CCC-------CHHHccCCcCcC--CCccCCCCCchhHHHHHHHHHHHHHH--------HHHCCCCeEEEeccCCCCCCCC
Confidence 432 667765432110 01111 246778888999999988 8887 34777888999985311
Q ss_pred ---------CChHHHHHHHHH-HHHHhhccCC--CCEEEeCCCcccCCCCCccccCCCCCcccchhhh-hcCCCCcceEE
Q 013811 211 ---------PSGRTIQAWITE-MASYVKSIDR--NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA-NNLIPGIDFAT 277 (436)
Q Consensus 211 ---------~~~~~~~~w~~~-~~~~Ir~~Dp--~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~-~~~~~~iD~~s 277 (436)
.+++....|++. +..++++..+ +.-|.+....... .|.|. ..... ..+...+|-++
T Consensus 239 ~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~~D~n~~~---------~~~~~--~~il~d~~A~~yv~GiA 307 (496)
T PF02055_consen 239 PNYPWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILIYDHNRDN---------LPDYA--DTILNDPEAAKYVDGIA 307 (496)
T ss_dssp TT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEEEEEEGGG---------TTHHH--HHHHTSHHHHTTEEEEE
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCCcc---------cchhh--hhhhcChhhHhheeEEE
Confidence 146778888875 8888988776 4444332221111 11110 00001 12346899999
Q ss_pred eecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC----CChHHHHHHHHHHHHHHHHHhhc
Q 013811 278 VHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG----YSTYQRDVMFNTVYYKIYSSAKR 353 (436)
Q Consensus 278 ~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g----~~~~~r~~~~~~~~~~i~~~~~~ 353 (436)
+|.|.+.- .... |.+ + -.+..+|.++.+|-.......+ ...-.|.+. ....|...+..
T Consensus 308 ~HwY~g~~-----~~~~-------l~~-~--h~~~P~k~l~~TE~~~g~~~~~~~~~~g~w~~~~~---y~~~ii~~lnn 369 (496)
T PF02055_consen 308 FHWYGGDP-----SPQA-------LDQ-V--HNKFPDKFLLFTEACCGSWNWDTSVDLGSWDRAER---YAHDIIGDLNN 369 (496)
T ss_dssp EEETTCS------HCHH-------HHH-H--HHHSTTSEEEEEEEESS-STTS-SS-TTHHHHHHH---HHHHHHHHHHT
T ss_pred EECCCCCc-----hhhH-------HHH-H--HHHCCCcEEEeeccccCCCCcccccccccHHHHHH---HHHHHHHHHHh
Confidence 99996531 0011 111 1 1113689999999754322111 111122221 12223445544
Q ss_pred CCCccceeeccccc--CCCCCC
Q 013811 354 GGAAAGGLFWQLLT--EGMDAF 373 (436)
Q Consensus 354 ~~~~~G~~~W~~~~--~g~~~~ 373 (436)
...||+.|.+.- +|.+.|
T Consensus 370 --~~~gw~~WNl~LD~~GGP~~ 389 (496)
T PF02055_consen 370 --WVSGWIDWNLALDENGGPNW 389 (496)
T ss_dssp --TEEEEEEEESEBETTS---T
T ss_pred --hceeeeeeeeecCCCCCCcc
Confidence 578999999864 333445
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.014 Score=50.04 Aligned_cols=107 Identities=16% Similarity=0.285 Sum_probs=68.5
Q ss_pred HHHHHHHHHHCCCCEEEEccccCCCC---C-CCc-cCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 70 VSTAFHEAASHGLTVARTWAFSDGGY---R-PLQ-RSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d~~~---~-~lq-~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.++.++.+++.|+|+|-+++-+.+++ | .+. ..|+ .. .+.|-++|++|++.||+|++.+.-.|+.. -....
T Consensus 2 ~~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~-L~---~Dllge~v~a~h~~Girv~ay~~~~~d~~-~~~~H 76 (132)
T PF14871_consen 2 PEQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPG-LK---RDLLGEQVEACHERGIRVPAYFDFSWDED-AAERH 76 (132)
T ss_pred HHHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCC-CC---cCHHHHHHHHHHHCCCEEEEEEeeecChH-HHHhC
Confidence 35678899999999999976544332 2 121 1333 12 46678999999999999999986555432 12356
Q ss_pred hhHHhh--cCCCCC----CCCCCC---CChHHHHHHHHHHHHHHhc
Q 013811 145 VNWARS--QGQFLT----SDDDFF---RNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 145 ~~W~~~--~G~~~~----~~~~f~---~~~~~~~~~~~~v~~iv~r 181 (436)
|.|..- .|.+.. ....++ -|...++.....++++++|
T Consensus 77 PeW~~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~ 122 (132)
T PF14871_consen 77 PEWFVRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDR 122 (132)
T ss_pred CceeeECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHc
Confidence 777652 233110 011122 1456778889999999999
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.00099 Score=65.21 Aligned_cols=23 Identities=35% Similarity=0.400 Sum_probs=16.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEecc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.|.+.+-|++-|+++|+.|.
T Consensus 108 ~~rwd~l~~F~~~tG~~liFgLN 130 (319)
T PF03662_consen 108 MSRWDELNNFAQKTGLKLIFGLN 130 (319)
T ss_dssp ----HHHHHHHHHHT-EEEEEE-
T ss_pred hhHHHHHHHHHHHhCCEEEEEec
Confidence 46789999999999999999994
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.057 Score=57.39 Aligned_cols=147 Identities=17% Similarity=0.199 Sum_probs=82.7
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCC------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDG------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA- 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~- 132 (436)
++-..+.+.|+.++++|+|+|=+....+. +|. .+.+.-| ..+.|..+|++|+++||+||+++.
T Consensus 108 G~~~gi~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G-----~~~e~k~lV~~aH~~Gi~VilD~V~ 182 (542)
T TIGR02402 108 GTFDAAIEKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYG-----GPDDLKALVDAAHGLGLGVILDVVY 182 (542)
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCccccccccC-----CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 34456777899999999999999443211 121 1122222 246788999999999999999985
Q ss_pred cCCCCCC-ChhhhhhHHhhcCC-CCCCCCCCCCCh---HHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCC
Q 013811 133 NNYDSFG-GKKQYVNWARSQGQ-FLTSDDDFFRNP---VVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207 (436)
Q Consensus 133 ~~w~~~g-g~~~y~~W~~~~G~-~~~~~~~f~~~~---~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~ 207 (436)
|+....+ ..+.|..|...... .... .-=|.++ .+++.+.+.++..++. |+=|- +-+++......
T Consensus 183 NH~~~~~~~~~~~~~y~~~~~~~~wg~-~~n~~~~~~~~vr~~i~~~~~~W~~e--------~~iDG--fR~D~~~~~~~ 251 (542)
T TIGR02402 183 NHFGPEGNYLPRYAPYFTDRYSTPWGA-AINFDGPGSDEVRRYILDNALYWLRE--------YHFDG--LRLDAVHAIAD 251 (542)
T ss_pred CCCCCccccccccCccccCCCCCCCCC-ccccCCCcHHHHHHHHHHHHHHHHHH--------hCCcE--EEEeCHHHhcc
Confidence 3211101 01111112110000 0000 1113456 8888888888888876 54331 11233222211
Q ss_pred CCCCChHHHHHHHHHHHHHhhccCCC
Q 013811 208 TSDPSGRTIQAWITEMASYVKSIDRN 233 (436)
Q Consensus 208 ~~~~~~~~~~~w~~~~~~~Ir~~Dp~ 233 (436)
. ....+++++.+.+|++.|+
T Consensus 252 ~------~~~~~l~~~~~~~~~~~p~ 271 (542)
T TIGR02402 252 T------SAKHILEELAREVHELAAE 271 (542)
T ss_pred c------cHHHHHHHHHHHHHHHCCC
Confidence 1 1246789999999999887
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0016 Score=60.68 Aligned_cols=120 Identities=16% Similarity=0.200 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHHHcCCEEEEeccc-CCCCC-CC----hhhhh--hHHh---------hcCCCC-CCC-CCCCCChHH---
Q 013811 110 FKGLDFVIAEARKYGIKLILSLAN-NYDSF-GG----KKQYV--NWAR---------SQGQFL-TSD-DDFFRNPVV--- 167 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~~-~w~~~-gg----~~~y~--~W~~---------~~G~~~-~~~-~~f~~~~~~--- 167 (436)
.+..+.+++...+.|.+.|++|.- .|-.- +- ...|+ +|.. ..|-.+ ... ..+-.+|..
T Consensus 23 g~~~~~f~~~~~~~ga~~m~T~pm~G~Vakd~~~~~~~~~fp~~~y~~Q~~~d~~~~~~Gng~~~~~~~~~~~~P~~~~~ 102 (239)
T PF12891_consen 23 GDVADTFIDQNLAAGAYSMMTLPMIGYVAKDANSVSESESFPSWRYGPQQWFDPWNPDCGNGVKPDKTALTSNDPDTPDN 102 (239)
T ss_dssp THHHHHHHHHHHHTT-EEEEEE--SSEEES-BSEGBGGGTSSSTTEEEBS-EETTEEEEE-SEESTSSS--SSSGGSSSS
T ss_pred HHHHHHHHHHhhhcCcceeEeecccceEecCCCCcccccCCChhhcccccccCcCcCCCCccccCCCCCCCCCCCCCCcc
Confidence 456789999999999999999841 11000 00 00111 1110 001000 011 112223430
Q ss_pred HHHHHHHHHHHHhccccccccccCCC---CcEEEEEeecCCCCCCC------C---ChHHHHHHHHHHHHHhhccCCCCE
Q 013811 168 KGYYKNLIKTVLNRYNTFTGIHYKDD---PTIMAWELMNEPRCTSD------P---SGRTIQAWITEMASYVKSIDRNHL 235 (436)
Q Consensus 168 ~~~~~~~v~~iv~r~n~~tg~~yk~~---p~I~~weL~NEp~~~~~------~---~~~~~~~w~~~~~~~Ir~~Dp~~l 235 (436)
..+..++|..|+++ |++. -.|-.|.|-|||..-.. + +.+.+..-.-+++++||++||+..
T Consensus 103 ~~y~~ewV~~l~~~--------~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~a~ 174 (239)
T PF12891_consen 103 PVYMDEWVNYLVNK--------YGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPDAK 174 (239)
T ss_dssp EEEHHHHHHHHHHH--------H--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TTSE
T ss_pred HhHHHHHHHHHHHH--------HhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCCe
Confidence 12223446666666 4443 35889999999985321 1 234555555678999999999987
Q ss_pred EE
Q 013811 236 LE 237 (436)
Q Consensus 236 V~ 237 (436)
|.
T Consensus 175 v~ 176 (239)
T PF12891_consen 175 VF 176 (239)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A .... |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.09 Score=57.95 Aligned_cols=162 Identities=14% Similarity=0.231 Sum_probs=82.8
Q ss_pred HHHHHHHHHHCCCCEEEEccccC----C--CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC--
Q 013811 70 VSTAFHEAASHGLTVARTWAFSD----G--GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY-- 135 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d----~--~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w-- 135 (436)
+++.|+.++++|+|+|=+-...+ . +|. ++.+.-|. .+.|..+|++|+++||+|||++. |+.
T Consensus 268 ~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt-----~~dfk~lV~~~H~~Gi~VilD~V~NH~~~ 342 (726)
T PRK05402 268 ADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGT-----PDDFRYFVDACHQAGIGVILDWVPAHFPK 342 (726)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCC-----HHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 33446999999999999843321 1 121 12222232 46789999999999999999975 321
Q ss_pred CC-----CCChhhhhhHHhhcCCC--CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecC----
Q 013811 136 DS-----FGGKKQYVNWARSQGQF--LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE---- 204 (436)
Q Consensus 136 ~~-----~gg~~~y~~W~~~~G~~--~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NE---- 204 (436)
+. +.|.+.|..-....|.. .....-=|.+|++++.+.+-++..+++. .+.|-.+---..++.++-...
T Consensus 343 ~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~-~iDG~R~D~v~~~~~~~~~~~~g~~ 421 (726)
T PRK05402 343 DAHGLARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEF-HIDGLRVDAVASMLYLDYSRKEGEW 421 (726)
T ss_pred CccchhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHh-CCcEEEECCHHHhhhcccccccccc
Confidence 10 11111110000000000 0000112457899999999999999761 122211100011111111100
Q ss_pred -CCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 205 -PRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 205 -p~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+............+++++.+.||+..|+.++.
T Consensus 422 ~~~~~~~~~~~~~~~fl~~~~~~~~~~~p~~~li 455 (726)
T PRK05402 422 IPNIYGGRENLEAIDFLRELNAVVHEEFPGALTI 455 (726)
T ss_pred ccccccCcCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 111100011235678899999999999986544
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.087 Score=56.92 Aligned_cols=163 Identities=12% Similarity=0.180 Sum_probs=86.4
Q ss_pred hHHHH-HHHHHHCCCCEEEEccccC----C--CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-C
Q 013811 69 KVSTA-FHEAASHGLTVARTWAFSD----G--GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-Y 135 (436)
Q Consensus 69 ~~~~~-l~~l~~~G~N~vRi~~~~d----~--~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w 135 (436)
.+.+. ++.++++|+|+|=+-...+ . +|. .+++.-|. .+.|.++|++|+++||+||+++.-+ .
T Consensus 157 ~i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt-----~~dlk~lV~~~H~~Gi~VilD~V~NH~ 231 (613)
T TIGR01515 157 ELADQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGT-----PDDFMYFVDACHQAGIGVILDWVPGHF 231 (613)
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCC-----HHHHHHHHHHHHHCCCEEEEEecccCc
Confidence 34444 5999999999999933211 1 121 11222221 4578999999999999999998532 1
Q ss_pred CC-------CCChhhhhhHHhhcCCC--CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCC
Q 013811 136 DS-------FGGKKQYVNWARSQGQF--LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR 206 (436)
Q Consensus 136 ~~-------~gg~~~y~~W~~~~G~~--~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~ 206 (436)
.. +.|.+.|..-....+.. ....+--+.+|.+++.+.+-++.++++. .+.|..+-.-+.++.++-.+++.
T Consensus 232 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey-~iDG~R~D~v~~~~~~~~~~~~~ 310 (613)
T TIGR01515 232 PKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFY-HIDGLRVDAVASMLYLDYSRDEG 310 (613)
T ss_pred CCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHh-CCcEEEEcCHHHhhhhccccccc
Confidence 10 11111110000000000 0000112357899999999999999861 12332221112343333333332
Q ss_pred C-----CCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 207 C-----TSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 207 ~-----~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
. ...........+++++.+.||+..|+.++.
T Consensus 311 ~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~li 346 (613)
T TIGR01515 311 EWSPNEDGGRENLEAVDFLRKLNQTVYEAFPGVVTI 346 (613)
T ss_pred cccccccCCcCChHHHHHHHHHHHHHHHHCCCeEEE
Confidence 1 000011235678899999999999986554
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.055 Score=58.28 Aligned_cols=62 Identities=18% Similarity=0.186 Sum_probs=43.6
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-ccCCC---C-----CCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FSDGG---Y-----RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~d~~---~-----~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
|-.-+.+-|+.++++|+|+|=+-. |.... | -.+.|.-| ..+.|+.++++|+++||+||+++.
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~G-----t~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLG-----GDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345678889999999999998833 31111 1 11222222 246788999999999999999985
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.17 Score=54.98 Aligned_cols=161 Identities=13% Similarity=0.218 Sum_probs=82.5
Q ss_pred HHHHHHHHHHCCCCEEEEccccC----C--CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCCCC
Q 013811 70 VSTAFHEAASHGLTVARTWAFSD----G--GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNYDS 137 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d----~--~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~ 137 (436)
+++.|+.++++|+|+|=+....+ . +|. .+.+.-|. .+.|.++|++|+++||+||+++. |+...
T Consensus 173 ~~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt-----~~d~k~lv~~~H~~Gi~VilD~V~nH~~~ 247 (633)
T PRK12313 173 ADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGT-----PEDFMYLVDALHQNGIGVILDWVPGHFPK 247 (633)
T ss_pred HHHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCC-----HHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 44446999999999999843211 1 121 12222232 46789999999999999999975 32110
Q ss_pred -------CCChhhhhhHHhh-cCCC--CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEee--cC-
Q 013811 138 -------FGGKKQYVNWARS-QGQF--LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELM--NE- 204 (436)
Q Consensus 138 -------~gg~~~y~~W~~~-~G~~--~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~--NE- 204 (436)
+.|.+.|. +... .+.. ....+--|.+|++++.+.+-++..++.. .+.|-.+-.-+.++..+-. .|
T Consensus 248 ~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~-~iDG~R~D~~~~~~~~d~~~~~~~ 325 (633)
T PRK12313 248 DDDGLAYFDGTPLYE-YQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEY-HLDGLRVDAVSNMLYLDYDEEGEW 325 (633)
T ss_pred CcccccccCCCccee-ecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHh-CCcEEEEcChhhhhhcccccccCc
Confidence 11111110 0000 0000 0000112457999999999999998761 1222111111111111100 00
Q ss_pred -CCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 205 -PRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 205 -p~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+............+++++.+.||+..|+.++.
T Consensus 326 ~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~li 359 (633)
T PRK12313 326 TPNKYGGRENLEAIYFLQKLNEVVYLEHPDVLMI 359 (633)
T ss_pred CCcccCCCCCcHHHHHHHHHHHHHHHHCCCeEEE
Confidence 110000001134678899999999999986443
|
|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.074 Score=55.61 Aligned_cols=130 Identities=15% Similarity=0.290 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChh--
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKK-- 142 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~-- 142 (436)
+...++..|..||++|+.-|=+-+. |-.++. .|+.|| |..+..+++.+++.||++.+.|.-+ -+||.-
T Consensus 266 ~~~al~a~L~aLK~aGVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlqvVmSFH--qCGGNVGD 336 (681)
T PLN02705 266 DPEGVRQELSHMKSLNVDGVVVDCW----WGIVEGWNPQKYV---WSGYRELFNIIREFKLKLQVVMAFH--EYGGNASG 336 (681)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeEeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEee--ccCCCCCC
Confidence 3577999999999999998887222 333444 688899 8999999999999999986655321 234421
Q ss_pred ----hhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 143 ----QYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 143 ----~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
..|.|..+.|. .+++-||+|..- .++.. -++|-.-++|-....+.-+.+.+
T Consensus 337 ~~~IPLP~WV~e~g~--~nPDifftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTplq~Y~D 391 (681)
T PLN02705 337 NVMISLPQWVLEIGK--DNQDIFFTDREG----------------------RRNTE-CLSWSIDKERVLKGRTGIEVYFD 391 (681)
T ss_pred cccccCCHHHHHhcc--cCCCceeecCCC----------------------Ccccc-eeeeecCcccccCCCCHHHHHHH
Confidence 25678776553 234677876431 23333 35699999997654433355666
Q ss_pred HHHHHHHHhhc
Q 013811 219 WITEMASYVKS 229 (436)
Q Consensus 219 w~~~~~~~Ir~ 229 (436)
|++........
T Consensus 392 FM~SFr~~F~~ 402 (681)
T PLN02705 392 FMRSFRSEFDD 402 (681)
T ss_pred HHHHHHHHHHH
Confidence 66555544444
|
|
| >COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.075 Score=53.72 Aligned_cols=178 Identities=16% Similarity=0.236 Sum_probs=100.7
Q ss_pred HHHHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCC------CChhhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 71 STAFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGS------YNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~------~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
...++.+|++-+-+||.+. |.++ .|. +.+.+|-. ..|..-=...+++++|++.|..+++.+.-.
T Consensus 52 kDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt~EF~~~~e~iGaep~~avN~G--- 128 (501)
T COG3534 52 KDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWGTTETNEFGTHEFMDWCELIGAEPYIAVNLG--- 128 (501)
T ss_pred HHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhcccccccccccccHHHHHHHHHHhCCceEEEEecC---
Confidence 3557889999999999965 2221 121 11222322 223333356789999999999988887422
Q ss_pred CCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---CChH
Q 013811 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---PSGR 214 (436)
Q Consensus 138 ~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---~~~~ 214 (436)
++|.+.-..|..-... ....+|.+ += | -.| ++.-=+|-.|.|+||-..... ...+
T Consensus 129 srgvd~ar~~vEY~n~---pggtywsd-------------lR-~---~~G--~~~P~nvK~w~lGNEm~GpWq~G~~~a~ 186 (501)
T COG3534 129 SRGVDEARNWVEYCNH---PGGTYWSD-------------LR-R---ENG--REEPWNVKYWGLGNEMDGPWQCGHKTAP 186 (501)
T ss_pred CccHHHHHHHHHHccC---CCCChhHH-------------HH-H---hcC--CCCCcccceEEeccccCCCcccccccCH
Confidence 2555555555432110 11222221 11 1 112 233336889999999955432 2445
Q ss_pred HHHHHHHHHHHHhhccCCCC-EEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCC
Q 013811 215 TIQAWITEMASYVKSIDRNH-LLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPD 283 (436)
Q Consensus 215 ~~~~w~~~~~~~Ir~~Dp~~-lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~ 283 (436)
.+-.++.+..++.|=.||.. .|..|+.+--+.. .|.|. +-+-..+...+|++|.|+|-+
T Consensus 187 EY~~~A~e~~k~~k~~d~t~e~~v~g~a~~~n~~-------~~~W~---~~vl~~~~e~vD~ISlH~Y~G 246 (501)
T COG3534 187 EYGRLANEYRKYMKYFDPTIENVVCGSANGANPT-------DPNWE---AVVLEEAYERVDYISLHYYKG 246 (501)
T ss_pred HHHHHHHHHHHHHhhcCccccceEEeecCCCCCC-------chHHH---HHHHHHHhhhcCeEEEEEecC
Confidence 66678889999999889864 4555543211111 12221 112234567799999999943
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.089 Score=54.06 Aligned_cols=129 Identities=12% Similarity=0.278 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChh---
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKK--- 142 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~--- 142 (436)
...++..|+.||++|+.-|=+-+. |-.++. .|++|| |..++++++.+++.||++.+.+.-+ -+||.-
T Consensus 36 ~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFH--qCGGNVGD~ 106 (517)
T PLN02801 36 EEGLEKQLKRLKEAGVDGVMVDVW----WGIVESKGPKQYD---WSAYRSLFELVQSFGLKIQAIMSFH--QCGGNVGDA 106 (517)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeee----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEec--ccCCCCCCc
Confidence 467999999999999998887222 333443 688999 8999999999999999986555322 234421
Q ss_pred ---hhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHH
Q 013811 143 ---QYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAW 219 (436)
Q Consensus 143 ---~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w 219 (436)
..|.|..+.|. .+++-||+|..- .++.. -++|.+-|+|-....+.-+.+.++
T Consensus 107 ~~IpLP~WV~~~g~--~~pDi~ftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTplq~Y~Df 161 (517)
T PLN02801 107 VNIPIPQWVRDVGD--SDPDIFYTNRSG----------------------NRNKE-YLSIGVDNLPLFHGRTAVEMYSDY 161 (517)
T ss_pred ccccCCHHHHHhhc--cCCCceeecCCC----------------------CcCcc-eeeeccCcccccCCCCHHHHHHHH
Confidence 24678766553 244677876431 22322 457889999987654323555666
Q ss_pred HHHHHHHhhc
Q 013811 220 ITEMASYVKS 229 (436)
Q Consensus 220 ~~~~~~~Ir~ 229 (436)
++........
T Consensus 162 m~SFr~~F~~ 171 (517)
T PLN02801 162 MKSFRENMAD 171 (517)
T ss_pred HHHHHHHHHH
Confidence 5555444443
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.087 Score=55.28 Aligned_cols=130 Identities=13% Similarity=0.271 Sum_probs=85.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
+...++..|..||++|+.-|=+-+. |-.++. .|+.|| |..+..+++.+++.||++.+.|.-+ -+||.
T Consensus 284 ~~~al~a~L~aLK~aGVdGVmvDVW----WGiVE~~gP~~Yd---WsgY~~L~~mvr~~GLKlqvVMSFH--qCGGNVGD 354 (702)
T PLN02905 284 DPDGLLKQLRILKSINVDGVKVDCW----WGIVEAHAPQEYN---WNGYKRLFQMVRELKLKLQVVMSFH--ECGGNVGD 354 (702)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEec--ccCCCCCC
Confidence 3467899999999999998887222 333444 688899 8999999999999999986665322 23442
Q ss_pred ---hhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 142 ---KQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
-..|.|....|. .+++-||+|..- .++... ++|-.-|+|-....+.-+.+..
T Consensus 355 ~~~IPLP~WV~e~g~--~nPDifftDrsG----------------------~rn~Ey-LSlg~D~~pvl~GRTplq~Y~D 409 (702)
T PLN02905 355 DVCIPLPHWVAEIGR--SNPDIFFTDREG----------------------RRNPEC-LSWGIDKERILRGRTALEVYFD 409 (702)
T ss_pred cccccCCHHHHHhhh--cCCCceEecCCC----------------------CccCce-eeeecccccccCCCCHHHHHHH
Confidence 125678765543 234667876431 233333 4699999997765433345565
Q ss_pred HHHHHHHHhhc
Q 013811 219 WITEMASYVKS 229 (436)
Q Consensus 219 w~~~~~~~Ir~ 229 (436)
|++........
T Consensus 410 FM~SFr~~F~~ 420 (702)
T PLN02905 410 YMRSFRVEFDE 420 (702)
T ss_pred HHHHHHHHHHH
Confidence 65554444444
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.19 Score=57.84 Aligned_cols=164 Identities=13% Similarity=0.201 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC----C--CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD----G--GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY 135 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w 135 (436)
+..++.++++|++|+|+|=+....+ . +|. ++.++-| ..+.|.++|++|+++||.||+++. |+.
T Consensus 766 ~l~~~lldYlk~LGvt~IeLmPv~e~p~~~swGY~~~~y~ap~~ryG-----t~~dfk~lVd~~H~~GI~VILD~V~nH~ 840 (1224)
T PRK14705 766 ELAKELVDYVKWLGFTHVEFMPVAEHPFGGSWGYQVTSYFAPTSRFG-----HPDEFRFLVDSLHQAGIGVLLDWVPAHF 840 (1224)
T ss_pred HHHHHHHHHHHHhCCCEEEECccccCCCCCCCCCCccccCCcCcccC-----CHHHHHHHHHHHHHCCCEEEEEeccccC
Confidence 3445568999999999999844322 1 121 1122222 256789999999999999999975 321
Q ss_pred CC-------CCChhhhhhHHhhcCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeec---
Q 013811 136 DS-------FGGKKQYVNWARSQGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMN--- 203 (436)
Q Consensus 136 ~~-------~gg~~~y~~W~~~~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~N--- 203 (436)
.. +.|...|-.-....|... ....--|.++++++.+.+-+...+++. .+.|..+---.+++..+-.-
T Consensus 841 ~~d~~~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~ey-hiDGfR~Dav~~mly~Dysr~~g 919 (1224)
T PRK14705 841 PKDSWALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEF-HIDGLRVDAVASMLYLDYSREEG 919 (1224)
T ss_pred CcchhhhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHh-CCCcEEEeehhhhhhcccccccc
Confidence 10 111111100000000000 000101467899999999999999871 12232121112222222211
Q ss_pred --CCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 204 --EPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 204 --Ep~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
.|+............+++++.+.|++..|+.++.
T Consensus 920 ~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~I 955 (1224)
T PRK14705 920 QWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVMI 955 (1224)
T ss_pred cccccccCCccChHHHHHHHHHHHHHHHHCCCeEEE
Confidence 1222211112345778999999999999876544
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.1 Score=53.57 Aligned_cols=129 Identities=14% Similarity=0.288 Sum_probs=83.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEec--ccCCCCCC---C
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSL--ANNYDSFG---G 140 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l--~~~w~~~g---g 140 (436)
...++..|+.||++|+.-|=+-+. |-.+|. .|+.|| |..+.++++.+++.||++.+.+ |..-...| +
T Consensus 116 ~~al~~~L~~LK~~GVdGVmvDVW----WGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGGNvGd~~~ 188 (531)
T PLN02161 116 LKALTVSLKALKLAGVHGIAVEVW----WGIVERFSPLEFK---WSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGG 188 (531)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEee----eeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCCCCccC
Confidence 467899999999999998887222 333444 788899 8999999999999999986655 43111111 1
Q ss_pred hhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHH
Q 013811 141 KKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWI 220 (436)
Q Consensus 141 ~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~ 220 (436)
+ ..|.|..+.|. .+++-||+|..- .++.. -++|.+-|+|-....+.-+.+.+++
T Consensus 189 I-pLP~WV~~~g~--~~pDi~ftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTplq~Y~Dfm 242 (531)
T PLN02161 189 I-SLPLWIREIGD--VNKDIYYRDKNG----------------------FSNND-YLTLGVDQLPLFGGRTAVQCYEDFM 242 (531)
T ss_pred c-cCCHHHHhhhc--cCCCceEEcCCC----------------------Ccccc-eeeeecccchhcCCCCHHHHHHHHH
Confidence 2 35778776553 234678887531 23333 4578899999876543224555555
Q ss_pred HHHHHHhh
Q 013811 221 TEMASYVK 228 (436)
Q Consensus 221 ~~~~~~Ir 228 (436)
+......+
T Consensus 243 ~SFr~~F~ 250 (531)
T PLN02161 243 LSFSTKFE 250 (531)
T ss_pred HHHHHHHH
Confidence 44443333
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.092 Score=54.25 Aligned_cols=130 Identities=13% Similarity=0.236 Sum_probs=84.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
++..++..|+.||++|+.-|=+-+. |-.++. .|+.|| |..+.++++.+++.||++.+.+.-+ -+||.
T Consensus 105 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFH--qCGGNVGD 175 (548)
T PLN02803 105 KPRAMNASLMALRSAGVEGVMVDAW----WGLVEKDGPMKYN---WEGYAELVQMVQKHGLKLQVVMSFH--QCGGNVGD 175 (548)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEee----eeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEec--ccCCCCCC
Confidence 3467899999999999998887222 333444 688999 9999999999999999986665322 23443
Q ss_pred ---hhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 142 ---KQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
-..|.|..+.|. .+++-||+|..- .+|.. -+.+.+-|+|-....+.-+.+.+
T Consensus 176 ~~~IpLP~WV~e~~~--~~pDi~ftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTplq~Y~D 230 (548)
T PLN02803 176 SCSIPLPPWVLEEMS--KNPDLVYTDRSG----------------------RRNPE-YISLGCDSLPVLRGRTPIQVYSD 230 (548)
T ss_pred cccccCCHHHHHhhh--cCCCceEecCCC----------------------Ccccc-eeccccccchhccCCCHHHHHHH
Confidence 125678765543 234667876431 22333 35688889988765432245566
Q ss_pred HHHHHHHHhhc
Q 013811 219 WITEMASYVKS 229 (436)
Q Consensus 219 w~~~~~~~Ir~ 229 (436)
|++......+.
T Consensus 231 fm~SFr~~F~~ 241 (548)
T PLN02803 231 YMRSFRERFKD 241 (548)
T ss_pred HHHHHHHHHHH
Confidence 65544444443
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.25 Score=53.44 Aligned_cols=160 Identities=11% Similarity=0.161 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHCCCCEEEEccccC----CC--CCC---CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCCCC-
Q 013811 69 KVSTAFHEAASHGLTVARTWAFSD----GG--YRP---LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNYDS- 137 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~~d----~~--~~~---lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~- 137 (436)
.+++.++.+|++|+|+|=+....+ .. |.. +.+.+ .|. ..+.|..+|++|+++||+||+++. |+...
T Consensus 169 ~~~~l~~ylk~lG~t~velmPv~e~~~~~~wGY~~~~~~~~~~-~~g--~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~ 245 (639)
T PRK14706 169 LAHRLGEYVTYMGYTHVELLGVMEHPFDGSWGYQVTGYYAPTS-RLG--TPEDFKYLVNHLHGLGIGVILDWVPGHFPTD 245 (639)
T ss_pred HHHHHHHHHHHcCCCEEEccchhcCCCCCCCCcCccccccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEecccccCcc
Confidence 445556899999999999844322 11 110 11111 121 256789999999999999999975 32110
Q ss_pred ------CCChhhh--hhHHhhcCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEE------e
Q 013811 138 ------FGGKKQY--VNWARSQGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE------L 201 (436)
Q Consensus 138 ------~gg~~~y--~~W~~~~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~we------L 201 (436)
+.|.+.| ..+ ..|... .+..-=+.++++++.+.+-++..++.. .+-|.++-.-.+++.++ +
T Consensus 246 ~~~l~~~dg~~~y~~~~~--~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~-~iDG~R~Dav~~~ly~d~~~~~~~ 322 (639)
T PRK14706 246 ESGLAHFDGGPLYEYADP--RKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDF-HVDGLRVDAVASMLYLDFSRTEWV 322 (639)
T ss_pred hhhhhccCCCcceeccCC--cCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHh-CCCeEEEeeehheeecccCccccc
Confidence 0111111 000 001000 000111357899999999999999762 23332222223333222 2
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 202 MNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 202 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
.|+.... .......+++++.+.||+..|+.+++
T Consensus 323 ~~~~gg~---~n~~a~~fl~~ln~~v~~~~p~~~~i 355 (639)
T PRK14706 323 PNIHGGR---ENLEAIAFLKRLNEVTHHMAPGCMMI 355 (639)
T ss_pred ccccCCc---ccHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 2222221 12346678899999999998976544
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.12 Score=53.48 Aligned_cols=127 Identities=14% Similarity=0.261 Sum_probs=82.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
++..++..|+.||++|+.-|=+-+. |-.++. .|+.|| |..+.++++.+++.||++.+.+.-+ -+||.
T Consensus 125 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~p~~Yd---WsgY~~L~~mvr~~GLKlq~VmSFH--qCGGNVGD 195 (573)
T PLN00197 125 RRKAMKASLQALKSAGVEGIMMDVW----WGLVERESPGVYN---WGGYNELLEMAKRHGLKVQAVMSFH--QCGGNVGD 195 (573)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEec--ccCCCCCC
Confidence 3467999999999999998887222 333444 788999 9999999999999999986665322 23442
Q ss_pred ---hhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 142 ---KQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
-..|.|....|. .+++-||+|..- .+|.. -++|-.-|+|-....+.-+.+.+
T Consensus 196 ~~~IpLP~WV~~~g~--~dpDifftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTpiq~Y~D 250 (573)
T PLN00197 196 SCTIPLPKWVVEEVD--KDPDLAYTDQWG----------------------RRNYE-YVSLGCDTLPVLKGRTPVQCYAD 250 (573)
T ss_pred cccccCCHHHHHhhc--cCCCceeecCCC----------------------Ccccc-eeccccccccccCCCCHHHHHHH
Confidence 125678766543 244678887531 22322 35688888887755433344555
Q ss_pred HHHHHHHH
Q 013811 219 WITEMASY 226 (436)
Q Consensus 219 w~~~~~~~ 226 (436)
|++.....
T Consensus 251 FM~SFr~~ 258 (573)
T PLN00197 251 FMRAFRDN 258 (573)
T ss_pred HHHHHHHH
Confidence 55444333
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.034 Score=49.55 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=44.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-C----CCCCCccCC-CCCCh--hhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-G----GYRPLQRSP-GSYNE--QMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-~----~~~~lq~~p-g~~~~--~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
+-..+.+.|+.++++|+|+|-+....+ . .+...++.. -..++ ...+.|+.++++|+++||+||+++.-
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 456788889999999999999844211 1 010011000 00111 12577899999999999999999863
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.32 Score=49.40 Aligned_cols=196 Identities=17% Similarity=0.219 Sum_probs=110.1
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCCC--CC-CCc----cCCCCC-ChhhhhhHHHHHHHHHHcCCEEEEecccCCC
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGG--YR-PLQ----RSPGSY-NEQMFKGLDFVIAEARKYGIKLILSLANNYD 136 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~--~~-~lq----~~pg~~-~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~ 136 (436)
.++..+.+.|+.++++|+|+|=.=+..+|. |+ .+. ..||.. -+..++.|-.+|++|+++||.|+.=+
T Consensus 61 ~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf----- 135 (418)
T COG1649 61 FQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHAWF----- 135 (418)
T ss_pred ccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeeech-----
Confidence 467889999999999999998763333331 21 111 123322 24457778899999999999997633
Q ss_pred CCCChh--------hhhhHHhhcCCC--C-CCC---CCCCCC---hHHHHHHHHHHHHHHhccccccccccCCCCc----
Q 013811 137 SFGGKK--------QYVNWARSQGQF--L-TSD---DDFFRN---PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT---- 195 (436)
Q Consensus 137 ~~gg~~--------~y~~W~~~~G~~--~-~~~---~~f~~~---~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~---- 195 (436)
.++.+. .++.|....... + ... ..+|-| |++++.+.+.+.++|++ |.=|+-
T Consensus 136 ~~~~~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv~evV~~--------YdvDGIQfDd 207 (418)
T COG1649 136 NPYRMAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLVVEVVRN--------YDVDGIQFDD 207 (418)
T ss_pred hhcccCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHHHHHHhC--------CCCCceecce
Confidence 222211 112222111000 0 011 355554 68999999999999988 654431
Q ss_pred EEEEEeecCCCCCCC-------------C-Ch--------HHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCcccc
Q 013811 196 IMAWELMNEPRCTSD-------------P-SG--------RTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253 (436)
Q Consensus 196 I~~weL~NEp~~~~~-------------~-~~--------~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~ 253 (436)
++.| -.+-....+ + +. +...+++.++..+||+..|+..+++.-. +........
T Consensus 208 ~fy~--~~~~gy~~~~~~~y~~et~~~~~~~~~~w~~WRr~~i~~~v~~i~~~VKavKp~v~~svsp~---n~~~~~~f~ 282 (418)
T COG1649 208 YFYY--PIPFGYDPDTVTLYRYETGKGPPSNPDQWTDWRRDNITALVAQISQTVKAVKPNVKFSVSPF---NPLGSATFA 282 (418)
T ss_pred eecc--cCccccCchHHHHHHhhccCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHhhCCCeEEEEccC---CCCCcccee
Confidence 2221 111111000 0 11 2455567888999999999999887541 100100011
Q ss_pred CCCCCcccchhhhhcCCCCcceEEeecC
Q 013811 254 VNPNLDIGTDFVANNLIPGIDFATVHSY 281 (436)
Q Consensus 254 ~np~~~~g~df~~~~~~~~iD~~s~H~Y 281 (436)
|+- ...|+..-.....+|.+-...|
T Consensus 283 y~~---~~qDw~~Wv~~G~iD~l~pqvY 307 (418)
T COG1649 283 YDY---FLQDWRRWVRQGLIDELAPQVY 307 (418)
T ss_pred hhh---hhhhHHHHHHcccHhhhhhhhh
Confidence 111 1234443344688998888888
|
|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.62 Score=51.53 Aligned_cols=161 Identities=11% Similarity=0.172 Sum_probs=89.7
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC----C--CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD----G--GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY 135 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w 135 (436)
+.+++.|+.++++|+|+|=+....+ . +|. ++.+.-|. .+.|..+|++|+++||.|||++. |+.
T Consensus 417 ~~~e~~LdYLk~LGvt~IeLmPv~e~~~~~swGY~~~~yfa~~~~yGt-----p~dfk~LVd~aH~~GI~VILDvV~NH~ 491 (897)
T PLN02960 417 EFTQKVLPHVKKAGYNAIQLIGVQEHKDYSSVGYKVTNFFAVSSRFGT-----PDDFKRLVDEAHGLGLLVFLDIVHSYA 491 (897)
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcccccCC-----HHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 3345679999999999999944321 0 121 11222222 46789999999999999999985 321
Q ss_pred CC--------CCChh-hhhhHHhhcCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe--e
Q 013811 136 DS--------FGGKK-QYVNWARSQGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL--M 202 (436)
Q Consensus 136 ~~--------~gg~~-~y~~W~~~~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL--~ 202 (436)
.. +.|.+ .|-. ....|... ....-=|.++++++.+.+-++..++. =.+.|..+-.-.+++..+- .
T Consensus 492 ~~d~~~~L~~FDG~~~~Yf~-~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~E-yhIDGfR~DAV~sMlY~d~g~~ 569 (897)
T PLN02960 492 AADEMVGLSLFDGSNDCYFH-SGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTE-YRVDGFQFHSLGSMLYTHNGFA 569 (897)
T ss_pred CCccccchhhcCCCccceee-cCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHH-HCCCceeecccceeeeeccCcc
Confidence 11 11110 0100 00001000 00111245789999999999999876 2244544433344443331 1
Q ss_pred cCCC-------CCCCCChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 203 NEPR-------CTSDPSGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 203 NEp~-------~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
+++. ... ......+++++...|++..|+.+++.
T Consensus 570 ~~~G~~~~~~n~~~---d~~Ai~fL~~lN~~v~~~~P~vilIA 609 (897)
T PLN02960 570 SFTGDLDEYCNQYV---DRDALIYLILANEMLHQLHPNIITIA 609 (897)
T ss_pred ccCCcccccCCccC---CchHHHHHHHHHHHHHhhCCCeEEEE
Confidence 1111 111 23467788999999999888775543
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.39 Score=52.48 Aligned_cols=163 Identities=14% Similarity=0.213 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC----C--CCCC---CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc-CCCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD----G--GYRP---LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN-NYDS 137 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~~---lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~-~w~~ 137 (436)
+..++.|+.++++|+|+|=+....+ . +|.. +.+.+ .|. ..+.|..+|++|+++||+||+++.- +...
T Consensus 270 ~la~~ll~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~-~~G--~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~ 346 (730)
T PRK12568 270 TLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTA-RHG--SPDGFAQFVDACHRAGIGVILDWVSAHFPD 346 (730)
T ss_pred HHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCCCcCCccCc-ccC--CHHHHHHHHHHHHHCCCEEEEEeccccCCc
Confidence 3455668999999999999844321 1 1211 11111 111 2467899999999999999999852 2111
Q ss_pred -------CCChhhhhhHHhhcCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEE--------
Q 013811 138 -------FGGKKQYVNWARSQGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE-------- 200 (436)
Q Consensus 138 -------~gg~~~y~~W~~~~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~we-------- 200 (436)
+.|...|.......|... ....-=|.+|++++.+.+-++..+++ -.+.|..+-.-..++..+
T Consensus 347 d~~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~e-yhIDG~R~DAva~mly~d~~r~~g~w 425 (730)
T PRK12568 347 DAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEH-YHLDGLRVDAVASMLYRDYGRAEGEW 425 (730)
T ss_pred cccccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHH-hCceEEEEcCHhHhhhhccccccccc
Confidence 111111210000001000 00011246789999999888888876 123332222112232222
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 201 LMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 201 L~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+-|+-... ..-....+++++.+.||+..|+.++.
T Consensus 426 ~pn~~gg~---en~ea~~Fl~~ln~~v~~~~P~~~~I 459 (730)
T PRK12568 426 VPNAHGGR---ENLEAVAFLRQLNREIASQFPGVLTI 459 (730)
T ss_pred cccccCCc---cChHHHHHHHHHHHHHHHHCCCeEEE
Confidence 11321111 11235678999999999999986554
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.67 Score=46.42 Aligned_cols=143 Identities=16% Similarity=0.184 Sum_probs=79.7
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCCh----hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChh
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYNE----QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKK 142 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~~----~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~ 142 (436)
-+.++-++.+|++|++.+=+-+ +-|| +.-....-..|+- -.-+-+.+++++|+++||++.+.++.. +++- +
T Consensus 91 fD~dqW~~~ak~aGakY~VlTakHHDG-F~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~-dw~~--~ 166 (346)
T PF01120_consen 91 FDADQWAKLAKDAGAKYVVLTAKHHDG-FCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPW-DWHH--P 166 (346)
T ss_dssp --HHHHHHHHHHTT-SEEEEEEE-TT---BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESS-SCCC--T
T ss_pred CCHHHHHHHHHHcCCCEEEeehhhcCc-cccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecch-HhcC--c
Confidence 5678889999999999887733 2232 1111111111221 234667899999999999999987642 2210 0
Q ss_pred hhhhHHhhcCCCCCCCCCCCCC---hH-HHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 143 QYVNWARSQGQFLTSDDDFFRN---PV-VKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 143 ~y~~W~~~~G~~~~~~~~f~~~---~~-~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
.|..- ..+. .....-.. ++ ..+.+...+++|++| | +|.++-++........ .+.
T Consensus 167 ~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~ql~EL~~~--------Y--~~d~lWfDg~~~~~~~------~~~- 224 (346)
T PF01120_consen 167 DYPPD--EEGD---ENGPADGPGNWQRYYNEYWLAQLRELLTR--------Y--KPDILWFDGGWPDPDE------DWD- 224 (346)
T ss_dssp TTTSS--CHCH---HCC--HCCHHHHHHHHHHHHHHHHHHHHC--------S--TESEEEEESTTSCCCT------HHH-
T ss_pred ccCCC--ccCC---cccccccchhhHhHhhhhhHHHHHHHHhC--------C--CcceEEecCCCCcccc------ccC-
Confidence 11000 0000 00000001 12 234778999999999 9 7889988887765221 111
Q ss_pred HHHHHHHHhhccCCCCEEE
Q 013811 219 WITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 219 w~~~~~~~Ir~~Dp~~lV~ 237 (436)
..++.+.||++.|+.+|.
T Consensus 225 -~~~~~~~i~~~qp~~ii~ 242 (346)
T PF01120_consen 225 -SAELYNWIRKLQPDVIIN 242 (346)
T ss_dssp -HHHHHHHHHHHSTTSEEE
T ss_pred -HHHHHHHHHHhCCeEEEe
Confidence 278899999999988875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.47 Score=51.24 Aligned_cols=143 Identities=20% Similarity=0.305 Sum_probs=79.6
Q ss_pred HHHHHHHHCCCCEEEEccccCC--------------CCCCC---ccCCCCC--Ch----hhhhhHHHHHHHHHHcCCEEE
Q 013811 72 TAFHEAASHGLTVARTWAFSDG--------------GYRPL---QRSPGSY--NE----QMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~--------------~~~~l---q~~pg~~--~~----~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+.|+.|+++|+|+|=+....+. +|... .+.+ .| ++ ...+.|..+|++|+++||+||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~~-~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vi 246 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPEG-SYSTNPYDPATRIRELKQMIQALHENGIRVI 246 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcCh-hhhcCCCccchHHHHHHHHHHHHHHCCCEEE
Confidence 5699999999999998432110 11110 1100 01 11 124679999999999999999
Q ss_pred EecccCCCCCCC--hhhhh----hHH---hhcCCCCC---CCCCC-CCChHHHHHHHHHHHHHHhccccccccccCCCCc
Q 013811 129 LSLANNYDSFGG--KKQYV----NWA---RSQGQFLT---SDDDF-FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT 195 (436)
Q Consensus 129 l~l~~~w~~~gg--~~~y~----~W~---~~~G~~~~---~~~~f-~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~ 195 (436)
+++.-+ +.++ ...|. .|. ...|.... -..++ +.+|.+++.+.+.++..+++ |+=|-
T Consensus 247 lDvV~N--H~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e--------~~iDG- 315 (605)
T TIGR02104 247 MDVVYN--HTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKE--------YNIDG- 315 (605)
T ss_pred EEEEcC--CccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHH--------cCCCE-
Confidence 998532 1111 00110 010 00010000 00111 24688999999999999987 54331
Q ss_pred EEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 196 IMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 196 I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+-++++.... ..+++++.+.+|+.+|+..+.
T Consensus 316 -fR~D~~~~~~----------~~~~~~~~~~~~~~~p~~~li 346 (605)
T TIGR02104 316 -FRFDLMGIHD----------IETMNEIRKALNKIDPNILLY 346 (605)
T ss_pred -EEEechhcCC----------HHHHHHHHHHHHhhCCCeEEE
Confidence 2245553221 335678888889998875543
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.45 Score=50.92 Aligned_cols=173 Identities=12% Similarity=0.124 Sum_probs=95.1
Q ss_pred eecccccccccCCc----chhhhHHHHHHHHHHCCCCEEEEccccC----CCC--CC-----CccCCCCCChhhhhhHHH
Q 013811 51 GFNAYWLMYVASDP----SQRSKVSTAFHEAASHGLTVARTWAFSD----GGY--RP-----LQRSPGSYNEQMFKGLDF 115 (436)
Q Consensus 51 G~N~~~~~~~~~~~----~~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~--~~-----lq~~pg~~~~~~l~~lD~ 115 (436)
.+++|.++..+-.+ +..+..++.|.+++++|+|+|=+....+ +.| .. .+.+-|. -+.|.+
T Consensus 144 ~~vIYElHvGs~~~~~~~~~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sryGt-----Pedfk~ 218 (628)
T COG0296 144 PIVIYELHVGSFTPDRFLGYFELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRYGT-----PEDFKA 218 (628)
T ss_pred CceEEEEEeeeccCCCCcCHHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccCCC-----HHHHHH
Confidence 45666665433223 3567889999999999999999955432 112 11 1112221 346789
Q ss_pred HHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh----------cCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccc
Q 013811 116 VIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS----------QGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYN 183 (436)
Q Consensus 116 ~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~----------~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n 183 (436)
+||+|+++||-|||+..-+ +++--..|...... .|... .....++..++++..+..-+...++. =
T Consensus 219 fVD~aH~~GIgViLD~V~~--HF~~d~~~L~~fdg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~-y 295 (628)
T COG0296 219 LVDAAHQAGIGVILDWVPN--HFPPDGNYLARFDGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEE-Y 295 (628)
T ss_pred HHHHHHHcCCEEEEEecCC--cCCCCcchhhhcCCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHH-h
Confidence 9999999999999997522 22211112111100 01000 01233444677788777666666665 2
Q ss_pred cccccccCCCCcEEEE--------EeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCC
Q 013811 184 TFTGIHYKDDPTIMAW--------ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNH 234 (436)
Q Consensus 184 ~~tg~~yk~~p~I~~w--------eL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~ 234 (436)
.+.|..+-.-++++.. .+-||..... .-...++.+++.+.|+..-|+.
T Consensus 296 HiDGlRvDAV~smly~d~~~~~~~~~~n~~ggr~---n~~a~efl~~~n~~i~~~~pg~ 351 (628)
T COG0296 296 HIDGLRVDAVASMLYLDYSRAEGEWVPNEYGGRE---NLEAAEFLRNLNSLIHEEEPGA 351 (628)
T ss_pred CCcceeeehhhhhhccchhhhhhcccccccCCcc---cHHHHHHhhhhhhhhcccCCCc
Confidence 2334333222333322 2334443321 2246677788888888776655
|
|
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.79 Score=44.95 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=90.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC----CCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG----GYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~ 141 (436)
..+.+++.++.|+.+|+|.+-++. .|. ..+.+-..+|.|.+ +.+.++++.|+++||.||+.+-. +|-+
T Consensus 15 ~~~~lk~~id~ma~~k~N~l~lhl-~D~f~~~~~p~~~~~~~~yT~---~ei~ei~~yA~~~gI~vIPeid~----pGH~ 86 (301)
T cd06565 15 KVSYLKKLLRLLALLGANGLLLYY-EDTFPYEGEPEVGRMRGAYTK---EEIREIDDYAAELGIEVIPLIQT----LGHL 86 (301)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEE-ecceecCCCcccccCCCCcCH---HHHHHHHHHHHHcCCEEEecCCC----HHHH
Confidence 347899999999999999999854 221 12223333566774 45678889999999999998743 2322
Q ss_pred hhhhhHHhhcCC-CCC--CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCC---CCCChHH
Q 013811 142 KQYVNWARSQGQ-FLT--SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCT---SDPSGRT 215 (436)
Q Consensus 142 ~~y~~W~~~~G~-~~~--~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~---~~~~~~~ 215 (436)
....+|-.-... ... ...--.++|+..+..++.++++++-. +..-...+.|.. ++++--+.+. .....+.
T Consensus 87 ~~~l~~~~~~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f-~s~~~HIG~DE~---~~~g~~~~~~~~~~~~~~~l 162 (301)
T cd06565 87 EFILKHPEFRHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELH-PSKYIHIGMDEA---YDLGRGRSLRKHGNLGRGEL 162 (301)
T ss_pred HHHHhCcccccccccCCCCCccCCCChhHHHHHHHHHHHHHHhC-CCCeEEECCCcc---cccCCCHHHHHhcCCCHHHH
Confidence 222211000000 000 01122457888888889999988761 100011122211 2222111110 0112456
Q ss_pred HHHHHHHHHHHhhccCCCCEEE
Q 013811 216 IQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 216 ~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+..+++++++.||+..+ .++.
T Consensus 163 ~~~~~~~v~~~v~~~g~-~~~~ 183 (301)
T cd06565 163 YLEHLKKVLKIIKKRGP-KPMM 183 (301)
T ss_pred HHHHHHHHHHHHHHcCC-EEEE
Confidence 78899999999999987 4444
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.28 Score=53.27 Aligned_cols=109 Identities=17% Similarity=0.273 Sum_probs=59.7
Q ss_pred HHHHHHHCCCCEEEEccccCC---------------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 73 AFHEAASHGLTVARTWAFSDG---------------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~---------------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.|+.|+++|+|+|=+-...+. +|. .+++.-|.-.+..++.|..+|++|+++||+||+++.
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDvV 263 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILDVV 263 (658)
T ss_pred chHHHHHcCCCEEEecCcccCCCcccccccccccccCcccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEEc
Confidence 499999999999998332110 121 111111211112456799999999999999999985
Q ss_pred -cCCCCCCChhhhhh----------HHhhcCCCC--C--CCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 133 -NNYDSFGGKKQYVN----------WARSQGQFL--T--SDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 133 -~~w~~~gg~~~y~~----------W~~~~G~~~--~--~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
|+-........+.. |....|... . ..+-=+.+|.+++.+.+-++..++.
T Consensus 264 ~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~~~~~~g~g~~ln~~~p~Vr~~iid~l~~W~~e 327 (658)
T PRK03705 264 FNHSAELDLDGPTLSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDWAIDCLRYWVET 327 (658)
T ss_pred ccCccCcCCCCcchhcccCCCccceEECCCCCcCCCCCccCcccCCCHHHHHHHHHHHHHHHHH
Confidence 32111000000000 100011000 0 0011134788999999999999987
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=94.27 E-value=1.2 Score=48.96 Aligned_cols=163 Identities=13% Similarity=0.225 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHCCCCEEEEccccCC------CCCC---CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc-CCCC-
Q 013811 69 KVSTAFHEAASHGLTVARTWAFSDG------GYRP---LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN-NYDS- 137 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~~d~------~~~~---lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~-~w~~- 137 (436)
..++.|+.++++|+|+|=+....+. +|.. +.+.+ .|. ..+.|.++|++|+++||+||+++.- +...
T Consensus 252 ~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~~-~~G--tp~dlk~LVd~aH~~GI~VilDvV~nH~~~~ 328 (758)
T PLN02447 252 FADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVSS-RSG--TPEDLKYLIDKAHSLGLRVLMDVVHSHASKN 328 (758)
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEecccccccc
Confidence 3567799999999999998443221 1110 11111 111 1367889999999999999999853 2110
Q ss_pred -CCChhhh----hhHHhh--cCCCC--CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEE------ee
Q 013811 138 -FGGKKQY----VNWARS--QGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE------LM 202 (436)
Q Consensus 138 -~gg~~~y----~~W~~~--~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~we------L~ 202 (436)
..|...+ ..|... .|... ....--|.++++++...+-++..+++- .+.|..+-.-.+++... ..
T Consensus 329 ~~~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey-~IDGfRfDaV~smlY~~hg~~~~f~ 407 (758)
T PLN02447 329 TLDGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEY-KFDGFRFDGVTSMLYHHHGLQMAFT 407 (758)
T ss_pred ccccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHh-CcccccccchhhhhccccCcccccc
Confidence 0011111 011100 01000 000111457889999999999999851 13333332223333221 11
Q ss_pred ---cCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 203 ---NEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 203 ---NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
||- ...........+++.+...|++..|+.+.+
T Consensus 408 ~~~~~~--~g~~~d~~a~~fL~~~N~~i~~~~p~~~~I 443 (758)
T PLN02447 408 GNYNEY--FGMATDVDAVVYLMLANDLLHGLYPEAVTI 443 (758)
T ss_pred cCcccc--cCCccChHHHHHHHHHHHHHHHhCCCeEEE
Confidence 221 111112345778899999999999986554
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=94.21 E-value=2.2 Score=45.52 Aligned_cols=62 Identities=18% Similarity=0.310 Sum_probs=43.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccc-cC----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAF-SD----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~-~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+.|+.++++|+|+|=+-.+ .. .+|. .+.|.-| ..+.|+.+|++|+++||+||+++.
T Consensus 25 ~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~G-----t~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFG-----TMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4456778899999999999988332 11 1111 1111112 257789999999999999999985
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.05 Score=52.68 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCC--CCCCccCC-CCCCh--hhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGG--YRPLQRSP-GSYNE--QMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~--~~~lq~~p-g~~~~--~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.-+.+.|++++++|+|+|=+....+.. +...++.. -..++ ...+.|.++|++|+++||+||+++.
T Consensus 4 ~gi~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 4 RGIIDKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp HHHHHTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEeee
Confidence 456777999999999999994432211 11111100 00111 1367889999999999999999985
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=94.01 E-value=1.2 Score=51.03 Aligned_cols=148 Identities=21% Similarity=0.305 Sum_probs=81.3
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-cc----C-------------------CCCCCC---ccCCCCCCh------hhhhhHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FS----D-------------------GGYRPL---QRSPGSYNE------QMFKGLD 114 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~----d-------------------~~~~~l---q~~pg~~~~------~~l~~lD 114 (436)
..+.+.|++|+++|+|+|=+.. +. + -+|.+. .+. +.|.. .....|.
T Consensus 480 ~gl~ekLdYLkeLGVT~I~LmPv~d~~~~~e~~~~~~~~~~~~~~~~ynWGYdp~~yfape-~~Ygtdp~dp~~ri~EfK 558 (1111)
T TIGR02102 480 AAFVEKLDYLQDLGVTHIQLLPVLSYFFVNEFKNKERMLDYASSNTNYNWGYDPQNYFALS-GMYSEDPKDPELRIAEFK 558 (1111)
T ss_pred HHHHHhHHHHHHcCCCEEEEcCccccccccccccccccccccccccccccCCCcCcCcccc-cccccCCcCccccHHHHH
Confidence 3455679999999999999843 21 0 001100 010 11211 1256799
Q ss_pred HHHHHHHHcCCEEEEecc-cCCCC---CCCh-hhhhhHHhhcCCCCC--CCCC-CCCChHHHHHHHHHHHHHHhcccccc
Q 013811 115 FVIAEARKYGIKLILSLA-NNYDS---FGGK-KQYVNWARSQGQFLT--SDDD-FFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 115 ~~i~~a~~~Gi~vil~l~-~~w~~---~gg~-~~y~~W~~~~G~~~~--~~~~-f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
.||++|+++||+||+++. |+-.. +-+. +.|-.+....|.... ...+ -..++.+++.+.+.++..++.
T Consensus 559 ~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e----- 633 (1111)
T TIGR02102 559 NLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE----- 633 (1111)
T ss_pred HHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh-----
Confidence 999999999999999985 32110 0000 011000000111000 0011 124678889999999999987
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
|+=|- +-++++... + ..+++++...+++++|+.++
T Consensus 634 ---y~VDG--FRfDl~g~~------d----~~~~~~~~~~l~~~dP~~~l 668 (1111)
T TIGR02102 634 ---FKVDG--FRFDMMGDH------D----AASIEIAYKEAKAINPNIIM 668 (1111)
T ss_pred ---cCCcE--EEEeccccC------C----HHHHHHHHHHHHHhCcCEEE
Confidence 65442 346776421 1 23456666778888997544
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.39 E-value=1.2 Score=44.71 Aligned_cols=233 Identities=18% Similarity=0.182 Sum_probs=118.5
Q ss_pred HHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCC
Q 013811 75 HEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQF 154 (436)
Q Consensus 75 ~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~ 154 (436)
..-++.|+|-||-++.-. + ..| .+ .|+ +.++|++++..-..|+-.|.. .-.|+.+.-..+ .|-.
T Consensus 12 t~~~Ei~v~yi~~~~v~h--~-~~q-~~-~~~---~t~~d~i~d~~~~~~~~~ie~-~l~~~~l~~~~~--~wq~----- 75 (428)
T COG3664 12 TTDDEIQVNYIRRHGVWH--V-NAQ-KL-FYP---FTYIDEIIDTLLDLGLDLIEL-FLIWNNLNTKEH--QWQL----- 75 (428)
T ss_pred chhhhhceeeehhcceee--e-eec-cc-cCC---hHHHHHHHHHHHHhccHHHHH-hhcccchhhhhh--hccc-----
Confidence 344689999998754311 1 111 11 144 567788888888888443332 222333211111 1211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCC
Q 013811 155 LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRN 233 (436)
Q Consensus 155 ~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~ 233 (436)
.-......++.+..+++.++.| |+-. -+...++..|||+...+ ...+.+.+..++ |+.+|.
T Consensus 76 -----n~~~~~~~~dl~~~fl~h~~~~--------vg~e~v~kw~f~~~~~pn~~ad--~~eyfk~y~~~a---~~~~p~ 137 (428)
T COG3664 76 -----NVDDPKSVFDLIAAFLKHVIRR--------VGVEFVRKWPFYSPNEPNLLAD--KQEYFKLYDATA---RQRAPS 137 (428)
T ss_pred -----ccCCcHhHHHHHHHHHHHHHHH--------hChhheeecceeecCCCCcccc--hHHHHHHHHhhh---hccCcc
Confidence 1111224788889999999999 4422 34556889999998742 233333333333 366665
Q ss_pred CEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCC--ChhH--------hHHHHHHHHH
Q 013811 234 HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSS--NDRD--------QLSFLNNWLD 303 (436)
Q Consensus 234 ~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~--~~~~--------~~~~~~~~i~ 303 (436)
-. +|. . | ||.. -..|.+ ..+.+||++.|.|...-..-+ +.+. .++. .+.+.
T Consensus 138 i~--vg~-~-w----------~~e~--l~~~~k--~~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~~-~r~~~ 198 (428)
T COG3664 138 IQ--VGG-S-W----------NTER--LHEFLK--KADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLED-LRGLK 198 (428)
T ss_pred ee--ecc-c-c----------CcHH--Hhhhhh--ccCcccceeecccccccccccCCCchhhhhhhhhhhhhH-HHHHH
Confidence 33 332 1 1 2210 011222 457899999999953211100 0110 0111 11223
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 304 THIQDAEHILRKPILLAEFGKSRKD--PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 304 ~~~~~a~~~~~kPv~i~EfG~~~~~--~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
+.++.. ..|+|+++.||-..... +-.++..|..++-..+. + .++.+.+.-+|.+.+-
T Consensus 199 d~i~~~--~~~~pl~~~~wntlt~~~~~~n~sy~raa~i~~~Lr---~---~g~~v~a~~yW~~sdl 257 (428)
T COG3664 199 DLIQHH--SLGLPLLLTNWNTLTGPREPTNGSYVRAAYIMRLLR---E---AGSPVDAFGYWTNSDL 257 (428)
T ss_pred HHHHhc--cCCCcceeecccccCCCccccCceeehHHHHHHHHH---h---cCChhhhhhhhhcccc
Confidence 333222 26899999999876543 11122233333222221 1 2456778889999873
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=93.12 E-value=3.8 Score=40.19 Aligned_cols=145 Identities=17% Similarity=0.156 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCc---------cCCCCCChhhhhhHHHHHHHHHHcCCEEEEe
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQ---------RSPGSYNEQMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq---------~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
.+.+++.++.|+..++|++-++.-.+-+| |.+. +..|.|.+ +.+.++++.|+++||.||+.
T Consensus 15 ~~~lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~---~di~elv~yA~~rgI~viPE 91 (303)
T cd02742 15 VESIKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTY---AQLKDIIEYAAARGIEVIPE 91 (303)
T ss_pred HHHHHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECH---HHHHHHHHHHHHcCCEEEEe
Confidence 47899999999999999999865433223 2222 11234553 56688999999999999998
Q ss_pred cccCCCCCCChhhhhhHHhhc------CCCCC--CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe-
Q 013811 131 LANNYDSFGGKKQYVNWARSQ------GQFLT--SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL- 201 (436)
Q Consensus 131 l~~~w~~~gg~~~y~~W~~~~------G~~~~--~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL- 201 (436)
+-. .|.......+..+. +.... ...--.++|++.+..++.+++++.- +. .+. +-|
T Consensus 92 iD~----PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~l--------f~-~~~---iHiG 155 (303)
T cd02742 92 IDM----PGHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAEL--------FP-DRY---LHIG 155 (303)
T ss_pred ccc----hHHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHh--------CC-CCe---EEec
Confidence 742 12221111111000 00000 0112235788888888888888876 52 222 222
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHhhccC
Q 013811 202 MNEPRCTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 202 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
+-|.....+ ..+.+..+++++.+.+++..
T Consensus 156 gDE~~~~~~-~~~l~~~f~~~~~~~v~~~g 184 (303)
T cd02742 156 GDEAHFKQD-RKHLMSQFIQRVLDIVKKKG 184 (303)
T ss_pred ceecCCCCC-HHHHHHHHHHHHHHHHHHcC
Confidence 223322111 23456778899999999876
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=93.01 E-value=2 Score=48.19 Aligned_cols=110 Identities=15% Similarity=0.283 Sum_probs=66.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEecc-cCCCCCCC------hhhhhh-HHhh---cCCCCCC---CCC-CCCChHHHHHHHHH
Q 013811 110 FKGLDFVIAEARKYGIKLILSLA-NNYDSFGG------KKQYVN-WARS---QGQFLTS---DDD-FFRNPVVKGYYKNL 174 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~-~~w~~~gg------~~~y~~-W~~~---~G~~~~~---~~~-f~~~~~~~~~~~~~ 174 (436)
...|+.||++|+++||+||+++. |+-.. +| .+.+.. |... .|. +.+ ..+ -..++.+++.+.+.
T Consensus 403 i~Efk~mV~alH~~Gi~VIlDVVyNHt~~-~g~~~~s~ld~~~P~YY~r~~~~G~-~~n~~~~~d~a~e~~~Vrk~iiDs 480 (898)
T TIGR02103 403 IKEFREMVQALNKTGLNVVMDVVYNHTNA-SGPNDRSVLDKIVPGYYHRLNEDGG-VENSTCCSNTATEHRMMAKLIVDS 480 (898)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeecccccc-cCccCcccccccCcHhhEeeCCCCC-eecCCCCcCCCCCCHHHHHHHHHH
Confidence 56788999999999999999985 33111 11 111111 1110 111 000 011 12368888999999
Q ss_pred HHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcc
Q 013811 175 IKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGF 243 (436)
Q Consensus 175 v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~ 243 (436)
++.+++. |+=|- +-++++.... ..+++++.+++|+++|+.. .+| |+|
T Consensus 481 l~~W~~e--------y~VDG--FRfDlm~~~~----------~~f~~~~~~~l~~i~pdi~-l~G-EgW 527 (898)
T TIGR02103 481 LVVWAKD--------YKVDG--FRFDLMGHHP----------KAQMLAAREAIKALTPEIY-FYG-EGW 527 (898)
T ss_pred HHHHHHH--------cCCCE--EEEechhhCC----------HHHHHHHHHHHHHhCCCEE-EEe-cCC
Confidence 9999987 65542 3467774432 4567888889999999754 344 555
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=92.33 E-value=7.5 Score=38.52 Aligned_cols=145 Identities=16% Similarity=0.205 Sum_probs=86.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCC-------CCc--------------------cCCCCCChhhhhhHHHHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYR-------PLQ--------------------RSPGSYNEQMFKGLDFVIAE 119 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~-------~lq--------------------~~pg~~~~~~l~~lD~~i~~ 119 (436)
.+.+++.++.|+..++|.+-++. +| .|+ .+. ...|.|. -+.+..+++.
T Consensus 16 ~~~ik~~id~ma~~K~N~lhlHl-tD-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT---~~di~eiv~y 90 (326)
T cd06564 16 MDFLKDIIKTMSWYKMNDLQLHL-ND-NLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYT---KEEFKELIAY 90 (326)
T ss_pred HHHHHHHHHHHHHcCCceEEEee-cC-CcccccCCCchhhhhhhhhccccccccccCCCCCCCCccc---HHHHHHHHHH
Confidence 47899999999999999999854 44 231 110 0123354 3567899999
Q ss_pred HHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCC-----CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-C
Q 013811 120 ARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQF-----LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-D 193 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~-----~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-~ 193 (436)
|+++||.||+.+-. .|.......+...-+.. .....--.++|++.+..++.+.+++.- |.. .
T Consensus 91 A~~rgI~vIPEID~----PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~--------f~~~~ 158 (326)
T cd06564 91 AKDRGVNIIPEIDS----PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDG--------FNPKS 158 (326)
T ss_pred HHHcCCeEeccCCC----cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHh--------cCCCC
Confidence 99999999988742 23222111111111110 001111246788888888888888886 442 2
Q ss_pred CcEEEEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 194 PTIMAWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 194 p~I~~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
+. +-| +-|.... ....+.+..+++++.+.|++.+.
T Consensus 159 ~~---~HiGgDE~~~~-~~~~~~~~~f~~~~~~~v~~~gk 194 (326)
T cd06564 159 DT---VHIGADEYAGD-AGYAEAFRAYVNDLAKYVKDKGK 194 (326)
T ss_pred CE---EEecccccccc-CccHHHHHHHHHHHHHHHHHcCC
Confidence 21 223 2222221 11346788899999999999853
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.67 Score=47.30 Aligned_cols=80 Identities=20% Similarity=0.294 Sum_probs=53.4
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhH
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGL 113 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~l 113 (436)
+|..+.+-|+| |-... ..--..+.+.++.|+++|++.|=+....+. +|. .+.+.-| ..+.|
T Consensus 9 ~~~~v~lQ~F~--W~~~~---~~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~G-----t~~el 78 (401)
T PLN02361 9 NGREILLQAFN--WESHK---HDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYG-----SEHLL 78 (401)
T ss_pred CCCcEEEEEEe--ccCCc---cHHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccC-----CHHHH
Confidence 56788889998 33211 111246888999999999999988443221 111 1111112 24578
Q ss_pred HHHHHHHHHcCCEEEEecc
Q 013811 114 DFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 114 D~~i~~a~~~Gi~vil~l~ 132 (436)
+.+|++|+++||+||+++.
T Consensus 79 ~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 79 KSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred HHHHHHHHHcCCEEEEEEc
Confidence 9999999999999999985
|
|
| >PF07488 Glyco_hydro_67M: Glycosyl hydrolase family 67 middle domain; InterPro: IPR011100 Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.62 Score=45.03 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=70.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-CCCCCChhhh
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-YDSFGGKKQY 144 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w~~~gg~~~y 144 (436)
+.+++.+.-+.+++.|+|.+=+ .+. ...+-...++.++.+..+-+..+.+||+|.|++.-. ....||.++
T Consensus 55 ~~~R~~~YARllASiGINgvvl---NNV-----Na~~~~Lt~~~l~~v~~lAdvfRpYGIkv~LSvnFasP~~lggL~T- 125 (328)
T PF07488_consen 55 DLTRYRDYARLLASIGINGVVL---NNV-----NANPKLLTPEYLDKVARLADVFRPYGIKVYLSVNFASPIELGGLPT- 125 (328)
T ss_dssp --HHHHHHHHHHHHTT--EEE----S-S-----S--CGGGSTTTHHHHHHHHHHHHHTT-EEEEEE-TTHHHHTTS-S--
T ss_pred chhHHHHHHHHHhhcCCceEEe---ccc-----ccChhhcCHHHHHHHHHHHHHHhhcCCEEEEEeeccCCcccCCcCc-
Confidence 3478889999999999998887 222 122233567789999999999999999999997311 111233221
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC--ChHHHHHHHHH
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--SGRTIQAWITE 222 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--~~~~~~~w~~~ 222 (436)
.+ --||++++.+++-+.+|-++ -|.+-++-+-=+-.....+ -+....+=.+-
T Consensus 126 -------------aD--Pld~~V~~WW~~k~~eIY~~-----------IPDfgGflVKAdSEGqPGP~~YgRthAdGANm 179 (328)
T PF07488_consen 126 -------------AD--PLDPEVRQWWKDKADEIYSA-----------IPDFGGFLVKADSEGQPGPFTYGRTHADGANM 179 (328)
T ss_dssp -----------------TTSHHHHHHHHHHHHHHHHH------------TT--EEEE--SBTTB--GGGGT--HHHHHHH
T ss_pred -------------CC--CCCHHHHHHHHHHHHHHHHh-----------CCCccceEEEecCCCCCCCcccCCCchhhHHH
Confidence 11 24788888888888777544 5666677664322222111 01122222355
Q ss_pred HHHHhhccC
Q 013811 223 MASYVKSID 231 (436)
Q Consensus 223 ~~~~Ir~~D 231 (436)
++++++-..
T Consensus 180 lA~Al~P~G 188 (328)
T PF07488_consen 180 LARALKPHG 188 (328)
T ss_dssp HHHHHGGGT
T ss_pred HHHHhhccC
Confidence 567776543
|
This family represents the central catalytic domain of alpha-glucuronidase [].; GO: 0046559 alpha-glucuronidase activity, 0045493 xylan catabolic process, 0005576 extracellular region; PDB: 1MQP_A 1K9E_A 1MQQ_A 1L8N_A 1K9D_A 1MQR_A 1K9F_A 1GQL_A 1GQI_B 1GQJ_B .... |
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
Probab=92.05 E-value=7.1 Score=37.08 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
..++.++..|+++|++|++.+.. |.. + .+ .....++..++.|.+-+-.++++ |
T Consensus 46 ~~~~~~~~~~~~~~~kvl~sigg-~~~-~---~~--------------~~~~~~~~~r~~fi~~lv~~~~~--------~ 98 (253)
T cd06545 46 SELNSVVNAAHAHNVKILISLAG-GSP-P---EF--------------TAALNDPAKRKALVDKIINYVVS--------Y 98 (253)
T ss_pred HHHHHHHHHHHhCCCEEEEEEcC-CCC-C---cc--------------hhhhcCHHHHHHHHHHHHHHHHH--------h
Confidence 35678899999999999999853 211 0 00 11345788888888888788877 6
Q ss_pred CCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCC
Q 013811 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
.=+---+-||-... ..+.+..+++++.+.+++. +.++++..
T Consensus 99 ~~DGIdiDwE~~~~-------~~~~~~~fv~~Lr~~l~~~--~~~lt~av 139 (253)
T cd06545 99 NLDGIDVDLEGPDV-------TFGDYLVFIRALYAALKKE--GKLLTAAV 139 (253)
T ss_pred CCCceeEEeeccCc-------cHhHHHHHHHHHHHHHhhc--CcEEEEEc
Confidence 54444445553211 1356888999999888764 34666543
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=91.64 E-value=1.7 Score=44.84 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCC----CCCC---CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDG----GYRP---LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~~---lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.+.|+.|+++|+++|=+....+. +|.. ....+..|. ..+.|+.+|++|+++||+||+++.
T Consensus 44 ~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fG--t~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 44 NFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYG--NEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCC--CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 55888999999999999888432211 1211 011111121 135688999999999999999974
|
|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.64 Score=49.57 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=43.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+.|+.++++|+++|=+-.+.. .+|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 31 dl~gi~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~G-----t~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYG-----TLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred CHHHHHHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 445677889999999999998843211 1121 1111112 246789999999999999999985
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.56 Score=49.91 Aligned_cols=66 Identities=14% Similarity=0.208 Sum_probs=44.0
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC-----CCCCCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD-----GGYRPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+.|+.++++|+|+|=+-.+-+ .+|.... .-..++. ..+.++.+|++|+++||+||+++.
T Consensus 25 Gdl~gi~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~d--y~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~V 97 (539)
T TIGR02456 25 GDFPGLTSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSD--YRAILPEFGTIDDFKDFVDEAHARGMRVIIDLV 97 (539)
T ss_pred cCHHHHHHhHHHHHHCCCCEEEECCCcCCCCCCCCCCccc--ccccChhhCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4556788889999999999998833211 1111000 0011221 246788999999999999999985
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=91.25 E-value=7.2 Score=38.75 Aligned_cols=143 Identities=14% Similarity=0.171 Sum_probs=85.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCcc----------CCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQR----------SPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq~----------~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.+.+++.++.|+..++|++-++.-.+-+| |.+.. ..|.|. -+.+..+++-|+++||.||+
T Consensus 17 ~~~lk~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT---~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 17 VAEVKRYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYT---QEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCC---HHHHHHHHHHHHHcCCEEEE
Confidence 47899999999999999999865433223 22221 113355 35678999999999999999
Q ss_pred ecccCCCCCCChh----hhhhHHhhcCCCC--------CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEE
Q 013811 130 SLANNYDSFGGKK----QYVNWARSQGQFL--------TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197 (436)
Q Consensus 130 ~l~~~w~~~gg~~----~y~~W~~~~G~~~--------~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~ 197 (436)
.+-.. |... .|+.-.. .+... ....--.++|+..+..++.+++++.- +.. +.
T Consensus 94 EiD~P----GH~~a~~~~~p~l~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~--------f~~-~~-- 157 (329)
T cd06568 94 EIDMP----GHTNAALAAYPELNC-DGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAAL--------TPG-PY-- 157 (329)
T ss_pred ecCCc----HHHHHHHHhChhhcc-CCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHh--------CCC-Ce--
Confidence 87421 2221 2222111 11100 00111235788888888888888765 422 21
Q ss_pred EEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 198 AWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 198 ~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
+.| +-|.... ..+.+..+++++++.+++...
T Consensus 158 -iHiGgDE~~~~---~~~~~~~f~~~~~~~v~~~Gk 189 (329)
T cd06568 158 -IHIGGDEAHST---PHDDYAYFVNRVRAIVAKYGK 189 (329)
T ss_pred -EEEecccCCCC---chHHHHHHHHHHHHHHHHCCC
Confidence 233 2333322 235677889999999998763
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=91.15 E-value=5 Score=40.78 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCCh----hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYNE----QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK 141 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~~----~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~ 141 (436)
.-+.++-.+.+|++|++.+=+-+ +-|| +.-.......|+- -.-+-+..+.++|+++||++-+.+.- ++++-
T Consensus 80 ~fD~~~Wa~~~k~AGakY~vlTaKHHDG-F~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~Y~S~-~DW~~-- 155 (384)
T smart00812 80 KFDPEEWADLFKKAGAKYVVLTAKHHDG-FCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGLYHSL-FDWFN-- 155 (384)
T ss_pred hCCHHHHHHHHHHcCCCeEEeeeeecCC-ccccCCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEEEcCH-HHhCC--
Confidence 35677889999999999887733 1122 1100001111111 02466789999999999999997542 32210
Q ss_pred hhhhhHHhhcCCCCCCCCCCCCChHHHHHH---HHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 142 KQYVNWARSQGQFLTSDDDFFRNPVVKGYY---KNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 142 ~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~---~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
+.|.. ......+-.+.+...+++ ...+++|+++ |+. .++-++...+-.. ..+
T Consensus 156 p~y~~-------~~~~~~~~~~~~~~~~y~~~~~~Ql~ELit~--------Ygp--d~lWfD~~~~~~~------~~~-- 210 (384)
T smart00812 156 PLYAG-------PTSSDEDPDNWPRFQEFVDDWLPQLRELVTR--------YKP--DLLWFDGGWEAPD------DYW-- 210 (384)
T ss_pred Ccccc-------ccccccccccchhHHHHHHHHHHHHHHHHhc--------CCC--ceEEEeCCCCCcc------chh--
Confidence 11110 000001111223444555 8999999999 975 6776776543111 111
Q ss_pred HHHHHHHHhhccCCCC
Q 013811 219 WITEMASYVKSIDRNH 234 (436)
Q Consensus 219 w~~~~~~~Ir~~Dp~~ 234 (436)
-..++.+.||++.|+.
T Consensus 211 ~~~~l~~~~~~~qP~~ 226 (384)
T smart00812 211 RSKEFLAWLYNLSPVK 226 (384)
T ss_pred cHHHHHHHHHHhCCCC
Confidence 1467899999999987
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=89.89 E-value=1 Score=47.12 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-ccC--CC-CCCCccC----------CCCCChh--hhhhHHHHHHHHHHcCCEEEEec
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FSD--GG-YRPLQRS----------PGSYNEQ--MFKGLDFVIAEARKYGIKLILSL 131 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~d--~~-~~~lq~~----------pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l 131 (436)
..+.+-|+.++++|+|+|=+-. +.. +. +...++. +|..|+. ..+.|+.+|++|+++||+||+++
T Consensus 22 ~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~ 101 (479)
T PRK09441 22 NRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADV 101 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4577889999999999988733 211 00 0111110 0111221 25678999999999999999998
Q ss_pred c
Q 013811 132 A 132 (436)
Q Consensus 132 ~ 132 (436)
.
T Consensus 102 V 102 (479)
T PRK09441 102 V 102 (479)
T ss_pred C
Confidence 5
|
|
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=89.80 E-value=1.2 Score=48.71 Aligned_cols=66 Identities=12% Similarity=0.217 Sum_probs=41.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccC--C-------------CCCCCcc-CCCCCChh--hhhhHHHHHHHHHHcCCEE
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSD--G-------------GYRPLQR-SPGSYNEQ--MFKGLDFVIAEARKYGIKL 127 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d--~-------------~~~~lq~-~pg~~~~~--~l~~lD~~i~~a~~~Gi~v 127 (436)
-.-+.+-|++++++|+|+|=+-. +.. + .+....+ ..-..|+. ..+.|+.+|++|+++||+|
T Consensus 229 l~Gi~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~V 308 (683)
T PRK09505 229 LRGLTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRI 308 (683)
T ss_pred HHHHHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEE
Confidence 34477889999999999998732 211 0 0000000 00011221 3567899999999999999
Q ss_pred EEecc
Q 013811 128 ILSLA 132 (436)
Q Consensus 128 il~l~ 132 (436)
|+++.
T Consensus 309 ilD~V 313 (683)
T PRK09505 309 LFDVV 313 (683)
T ss_pred EEEEC
Confidence 99975
|
|
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Probab=89.71 E-value=10 Score=37.70 Aligned_cols=127 Identities=19% Similarity=0.270 Sum_probs=77.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
.+.+.+.++.+++.|+.+==+|. |..|.. ....-.+|++.+-....++++.++.|++|++.++.....-.+.+.|..
T Consensus 23 ~~ev~~~~~~~~~~~iP~d~i~l--D~~~~~-~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e 99 (339)
T cd06603 23 QEDVKEVDAGFDEHDIPYDVIWL--DIEHTD-GKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKE 99 (339)
T ss_pred HHHHHHHHHHHHHcCCCceEEEE--ChHHhC-CCCceEeCcccCCCHHHHHHHHHHCCCEEEEEecCceecCCCCHHHHH
Confidence 46789999999999988655543 211210 011224677778888999999999999999988643221111233432
Q ss_pred HHhhcC--------CCC-----C---CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCC
Q 013811 147 WARSQG--------QFL-----T---SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207 (436)
Q Consensus 147 W~~~~G--------~~~-----~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~ 207 (436)
+.+.| ... + ...| |+||++++.|.+.++.+... .+.+....|.=+|||..
T Consensus 100 -~~~~g~~vk~~~g~~~~~~~w~g~~~~~D-ftnp~a~~ww~~~~~~~~~~---------~~~g~~g~w~D~~Ep~~ 165 (339)
T cd06603 100 -AKDKGYLVKNSDGGDFEGWCWPGSSSWPD-FLNPEVRDWWASLFSYDKYK---------GSTENLYIWNDMNEPSV 165 (339)
T ss_pred -HHHCCeEEECCCCCEEEEEECCCCcCCcc-CCChhHHHHHHHHHHHHhhc---------ccCCCceEEeccCCccc
Confidence 11111 000 0 1123 57899999999999887632 12233455777999864
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. |
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.09 E-value=23 Score=34.35 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=41.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEE-ccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 66 QRSKVSTAFHEAASHGLTVART-WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi-~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
+.+.+++.++.+++.|++++=+ |.-- | .+ .|... =.-|-+.++.|.+.||+|++-|.-
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~y-G------~~--~fg~~-~g~La~~l~~A~~~Gl~v~vGL~~ 94 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRY-G------DA--DFGGQ-RGWLAKRLAAAQQAGLKLVVGLYA 94 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeec-c------CC--Ccccc-hHHHHHHHHHHHHcCCEEEEcccC
Confidence 3578999999999999999887 4311 1 00 11111 234678899999999999999963
|
|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
Probab=88.84 E-value=1.4 Score=51.03 Aligned_cols=98 Identities=9% Similarity=0.067 Sum_probs=60.8
Q ss_pred CEEeeCCeEEECC-eEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEcc-ccCC----CCC---CCccCC
Q 013811 32 FIRTRGSHFLLNG-NLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA-FSDG----GYR---PLQRSP 102 (436)
Q Consensus 32 fv~v~g~~f~~nG-kp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~-~~d~----~~~---~lq~~p 102 (436)
++.|. ..|.+|| +.+-+.|++..-.-. ---+.-..+++.|+.++++|+|+|=+-. +.-+ .|. .++-.|
T Consensus 98 y~~V~-P~L~i~~~~~lPl~~i~iqTvls--K~mG~~~~w~~~L~~ik~lGyN~IhftPI~~~G~SnS~Ysi~Dyl~idP 174 (1464)
T TIGR01531 98 YFVVL-PMLYINADKFLPLDSIALQTVLA--KLLGPLSEWEPRLRVAKEKGYNMIHFTPLQELGGSNSCYSLYDQLQLNQ 174 (1464)
T ss_pred EEEeC-CeeEECCCcccCcCceeeeeehh--hhcCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCccccchhhcCh
Confidence 44444 6777888 888888888631100 0001225799999999999999999833 2111 111 111122
Q ss_pred CCCC-hhhhhhHHHHHHHHHHc-CCEEEEecc
Q 013811 103 GSYN-EQMFKGLDFVIAEARKY-GIKLILSLA 132 (436)
Q Consensus 103 g~~~-~~~l~~lD~~i~~a~~~-Gi~vil~l~ 132 (436)
--+. +...+.+..+|++|++. ||++|+++.
T Consensus 175 ~~~~~~~~~~d~~~lV~~~h~~~Gm~~ilDvV 206 (1464)
T TIGR01531 175 HFKSQKDGKNDVQALVEKLHRDWNVLSITDIV 206 (1464)
T ss_pred hhcccCCcHHHHHHHHHHHHHhcCCEEEEEee
Confidence 1110 12346788999999995 999999985
|
glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground. |
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.52 Score=47.56 Aligned_cols=118 Identities=15% Similarity=0.317 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh-----
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK----- 141 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~----- 141 (436)
..++..|+.||++|+.-|=+-+. |-.++. .|++|| |..++++++.+++.||++.+.+.-+ -+||.
T Consensus 16 ~~~~~~L~~LK~~GV~GVmvdvW----WGiVE~~~p~~yd---Ws~Y~~l~~~vr~~GLk~~~vmsfH--~cGgNvgD~~ 86 (402)
T PF01373_consen 16 NALEAQLRALKSAGVDGVMVDVW----WGIVEGEGPQQYD---WSGYRELFEMVRDAGLKLQVVMSFH--QCGGNVGDDC 86 (402)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEE----HHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S---BSSSTTSSS
T ss_pred HHHHHHHHHHHHcCCcEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEeee--cCCCCCCCcc
Confidence 47899999999999998887221 222343 478898 8999999999999999997665321 22432
Q ss_pred -hhhhhHHhhcCCC--C--CCC---------CCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeec
Q 013811 142 -KQYVNWARSQGQF--L--TSD---------DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMN 203 (436)
Q Consensus 142 -~~y~~W~~~~G~~--~--~~~---------~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~N 203 (436)
-..|.|..+.+.. + .+. ...+.... .+.|.++++.+.++ |++. ..|...+++=
T Consensus 87 ~IpLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt-~~~Y~dfm~sF~~~--------f~~~~~~I~~I~vgl 154 (402)
T PF01373_consen 87 NIPLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRT-LQCYSDFMRSFRDN--------FSDYLSTITEIQVGL 154 (402)
T ss_dssp EB-S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBC-HHHHHHHHHHHHHH--------CHHHHTGEEEEEE--
T ss_pred CCcCCHHHHhccccCCcEEECCCCCcCcceeecccCCch-HHHHHHHHHHHHHH--------HHHHHhhheEEEecc
Confidence 1346787542211 0 000 01222334 78888888888887 4443 3455555543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=87.91 E-value=1.4 Score=48.69 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=43.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-cc--CC---CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FS--DG---GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~--d~---~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-..+.+.+++++++|+++|=+-. +. .+ +|. .+.+.-| ..+.|+.++++|+++||+||+++.
T Consensus 14 tf~~~~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lG-----t~edf~~Lv~aah~~Gm~vIlDiV 86 (825)
T TIGR02401 14 TFDDAAALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELG-----GEEGLRRLSEAARARGLGLIVDIV 86 (825)
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCC-----CHHHHHHHHHHHHHCCCEEEEEec
Confidence 346788999999999999998733 21 11 111 1222222 256789999999999999999985
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.82 E-value=1.4 Score=48.96 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC---C---CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD---G---GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d---~---~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
-..+.+.+++++++|+|+|=+-.+.. + +|. .+.+.-| ..+.|+.++++|+++||+||+++.
T Consensus 19 f~~~~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lG-----t~e~f~~Lv~aah~~Gi~VIlDiV 90 (879)
T PRK14511 19 FDDAAELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELG-----GEEGLRRLAAALRAHGMGLILDIV 90 (879)
T ss_pred HHHHHHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCC-----CHHHHHHHHHHHHHCCCEEEEEec
Confidence 46789999999999999998833211 1 111 1222222 246789999999999999999986
|
|
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Probab=87.47 E-value=9.9 Score=37.93 Aligned_cols=156 Identities=19% Similarity=0.206 Sum_probs=87.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhH--HHHHHHHHHcCCEEEEecccCCCCC---CCh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGL--DFVIAEARKYGIKLILSLANNYDSF---GGK 141 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~l--D~~i~~a~~~Gi~vil~l~~~w~~~---gg~ 141 (436)
.+.+.+.++.+++.|+.+==+|. |..|.. ....-.+|++.+-.. +.+|+++++.|++|++.++-+.... ...
T Consensus 23 ~~~v~~~~~~~r~~~iP~d~i~l--D~~~~~-~~~~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~~ 99 (339)
T cd06602 23 VDEVKEVVENMRAAGIPLDVQWN--DIDYMD-RRRDFTLDPVRFPGLKMPEFVDELHANGQHYVPILDPAISANEPTGSY 99 (339)
T ss_pred HHHHHHHHHHHHHhCCCcceEEE--Cccccc-CccceecccccCCCccHHHHHHHHHHCCCEEEEEEeCccccCcCCCCC
Confidence 46789999999999988655543 222311 001234677777777 8999999999999999875432210 111
Q ss_pred hhhhhHHhh-------cCCCC-----C---CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCC
Q 013811 142 KQYVNWARS-------QGQFL-----T---SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR 206 (436)
Q Consensus 142 ~~y~~W~~~-------~G~~~-----~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~ 206 (436)
..|.+-... .|.+. + ...+ |+||++++.|.+.++.++.. ++-+ ..|.=+|||.
T Consensus 100 ~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~D-ftnp~a~~ww~~~~~~~~~~--------~Gvd---g~w~D~~Ep~ 167 (339)
T cd06602 100 PPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPD-FLNPNTQEWWTDEIKDFHDQ--------VPFD---GLWIDMNEPS 167 (339)
T ss_pred HHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcC-CCCHHHHHHHHHHHHHHHhc--------CCCc---EEEecCCCCc
Confidence 222211110 11110 0 1123 68899999999999887764 2222 3477799996
Q ss_pred CCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 207 CTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 207 ~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
.......-....+.+.+.+.+++....+++.
T Consensus 168 ~~~~~hN~y~~~~~~~~~~~~~~~~~~r~~~ 198 (339)
T cd06602 168 NFYDVHNLYGLSEAIATYKALQSIPGKRPFV 198 (339)
T ss_pred hHhhhcchhhHHHHHHHHHHHHhcCCCCCEE
Confidence 4310000111233455566777652233443
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of |
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=87.44 E-value=27 Score=34.99 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=63.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCcc-----CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQR-----SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN 134 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq~-----~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~ 134 (436)
.+.+++.++.|+..++|++-++.-.+-+| |.+.. ..|.|. -+.+..+++-|+++||.||+.+-..
T Consensus 17 ~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~~~~YT---~~di~eiv~yA~~rgI~vIPEID~P 93 (348)
T cd06562 17 VDSIKRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSPSEVYT---PEDVKEIVEYARLRGIRVIPEIDTP 93 (348)
T ss_pred HHHHHHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCCCceEC---HHHHHHHHHHHHHcCCEEEEeccCc
Confidence 47899999999999999999865433233 22211 012344 4567899999999999999987421
Q ss_pred CCCCCC-hhhhhhHHhhc-------CCCCCCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 135 YDSFGG-KKQYVNWARSQ-------GQFLTSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 135 w~~~gg-~~~y~~W~~~~-------G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
.+.+. ...|+.-.... +.......--.++|++.+..++.++++++-
T Consensus 94 -GH~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~l 147 (348)
T cd06562 94 -GHTGSWGQGYPELLTGCYAVWRKYCPEPPCGQLNPTNPKTYDFLKTLFKEVSEL 147 (348)
T ss_pred -hhhHHHHHhChhhhCCCCccccccccCCCCccccCCChhHHHHHHHHHHHHHHh
Confidence 11110 01111110000 000000011134678888888888888875
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=87.09 E-value=24 Score=35.47 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=64.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCcc----C-----------------CCCCChhhhhhHHHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQR----S-----------------PGSYNEQMFKGLDFVIA 118 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq~----~-----------------pg~~~~~~l~~lD~~i~ 118 (436)
.+.+++.++.|+..++|++-++...+-+| |.|.. + .|.|. -+.+..+++
T Consensus 17 ~~~ik~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT---~~di~eiv~ 93 (357)
T cd06563 17 VDEVKRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYT---QEEIREIVA 93 (357)
T ss_pred HHHHHHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceEC---HHHHHHHHH
Confidence 47899999999999999999866433223 22210 0 13344 456789999
Q ss_pred HHHHcCCEEEEecccCCCCCCChhh----hhhHHhhcCCC--------CCCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 119 EARKYGIKLILSLANNYDSFGGKKQ----YVNWARSQGQF--------LTSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 119 ~a~~~Gi~vil~l~~~w~~~gg~~~----y~~W~~~~G~~--------~~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
.|+++||.||+.+-. .|.... |+.-.. .+.. .....--.++|+..+..++.++++++-
T Consensus 94 yA~~rgI~VIPEID~----PGH~~a~l~~~pel~~-~~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~l 163 (357)
T cd06563 94 YAAERGITVIPEIDM----PGHALAALAAYPELGC-TGGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAEL 163 (357)
T ss_pred HHHHcCCEEEEecCC----chhHHHHHHhCccccC-CCCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 999999999998742 122211 111100 0000 000111235678888888888888875
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=87.08 E-value=18 Score=36.87 Aligned_cols=178 Identities=18% Similarity=0.263 Sum_probs=91.4
Q ss_pred EEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC----ccCCC--CCChhhh-hhHHHHHHHH
Q 013811 48 FANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL----QRSPG--SYNEQMF-KGLDFVIAEA 120 (436)
Q Consensus 48 ~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l----q~~pg--~~~~~~l-~~lD~~i~~a 120 (436)
...|+|.|+.... + .+.+.+.+.++.++++|++.+=+ .| +|..- ...-| ..|++.| ..|..+++.+
T Consensus 41 ~pv~~nsW~~~~~--d-~~e~~i~~~a~~~~~~G~e~fvi---DD-GW~~~r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i 113 (394)
T PF02065_consen 41 PPVGWNSWEAYYF--D-ITEEKILELADAAAELGYEYFVI---DD-GWFGGRDDDNAGLGDWEPDPKKFPNGLKPLADYI 113 (394)
T ss_dssp --EEEESHHHHTT--G---HHHHHHHHHHHHHHT-SEEEE----S-SSBCTESTTTSTTSBECBBTTTSTTHHHHHHHHH
T ss_pred CceEEEcccccCc--C-CCHHHHHHHHHHHHHhCCEEEEE---cC-ccccccCCCcccCCceeEChhhhCCcHHHHHHHH
Confidence 4467887533221 2 24578899999999999996655 33 34210 00112 1233333 4689999999
Q ss_pred HHcCCEEEEecccCC--CCCCChhhhhhHHhhc-CCCCC-CCC---CCCCChHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 121 RKYGIKLILSLANNY--DSFGGKKQYVNWARSQ-GQFLT-SDD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 121 ~~~Gi~vil~l~~~w--~~~gg~~~y~~W~~~~-G~~~~-~~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
++.||+.-|-+--.- ..+.=...++.|.... +.... ..+ --+++|+++++..+.+..+++. ++ -
T Consensus 114 ~~~Gmk~GlW~ePe~v~~~S~l~~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~--------~g-i 184 (394)
T PF02065_consen 114 HSLGMKFGLWFEPEMVSPDSDLYREHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLRE--------WG-I 184 (394)
T ss_dssp HHTT-EEEEEEETTEEESSSCHCCSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHH--------TT--
T ss_pred HHCCCeEEEEeccccccchhHHHHhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHh--------cC-C
Confidence 999999977652100 0000011245665321 11100 111 1257899999999999888876 32 1
Q ss_pred CcEEEEEeecCCCCCCCCC-hHHHHHHH---HHHHHHhhccCCCCEEEeCCCc
Q 013811 194 PTIMAWELMNEPRCTSDPS-GRTIQAWI---TEMASYVKSIDRNHLLEAGLEG 242 (436)
Q Consensus 194 p~I~~weL~NEp~~~~~~~-~~~~~~w~---~~~~~~Ir~~Dp~~lV~vG~~g 242 (436)
.-+=|+..-......... ++.+.+.. -++.+.+|+.-|+.+|...+.|
T Consensus 185 -dYiK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~L~~~~P~v~iE~CssG 236 (394)
T PF02065_consen 185 -DYIKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLDRLRARFPDVLIENCSSG 236 (394)
T ss_dssp -SEEEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHHHHHHTTTSEEEE-BTT
T ss_pred -CEEEeccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCcEEEeccCC
Confidence 123366533333222211 12233322 3577888999999998866544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=87.00 E-value=2.1 Score=42.23 Aligned_cols=157 Identities=15% Similarity=0.146 Sum_probs=78.7
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC---------CC-----------CCC---------CccCCCCCC----hhhhh
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD---------GG-----------YRP---------LQRSPGSYN----EQMFK 111 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d---------~~-----------~~~---------lq~~pg~~~----~~~l~ 111 (436)
++-+++++.|+.|+=.|+|..=.+.-.+ -+ .|+ ++.--|... ++.++
T Consensus 16 WdW~rWEreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~ 95 (333)
T PF05089_consen 16 WDWERWEREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAE 95 (333)
T ss_dssp --HHHHHHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHH
Confidence 3557999999999999999887654211 00 011 111112122 23333
Q ss_pred hHHHHHHHHHHcCCEEEEecccCCCCCCC-hhhhh--------hHHhhcCCCCCCCCCC--CCChHHHHHHHHHHHHHHh
Q 013811 112 GLDFVIAEARKYGIKLILSLANNYDSFGG-KKQYV--------NWARSQGQFLTSDDDF--FRNPVVKGYYKNLIKTVLN 180 (436)
Q Consensus 112 ~lD~~i~~a~~~Gi~vil~l~~~w~~~gg-~~~y~--------~W~~~~G~~~~~~~~f--~~~~~~~~~~~~~v~~iv~ 180 (436)
.=.++++.+++.||..||.=+..--. .. ...|| .|.. . ....| .+||-..+.-+.++++..+
T Consensus 96 Lq~kIl~RmreLGm~PVLPaF~G~VP-~~~~~~~P~a~i~~~~~W~~---f---~~~~~L~P~dplF~~i~~~F~~~q~~ 168 (333)
T PF05089_consen 96 LQKKILDRMRELGMTPVLPAFAGHVP-RAFKRKYPNANITRQGNWNG---F---CRPYFLDPTDPLFAEIAKLFYEEQIK 168 (333)
T ss_dssp HHHHHHHHHHHHT-EEEEE--S-EE--TTHHHHSTT--EE---EETT---E---E--EEE-SS--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccCCCcCCCCC-hHHHhcCCCCEEeeCCCcCC---C---CCCceeCCCCchHHHHHHHHHHHHHH
Confidence 34689999999999999975421000 00 01111 1110 0 00011 1456666777788888888
Q ss_pred ccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 181 RYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 181 r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
. |+ ...+.+-+..||-..... ..+.+.+-.+.+.+.+++.||+..-.+
T Consensus 169 ~--------yG-~~~~Y~~D~FnE~~p~~~-~~~~l~~~s~~v~~am~~~dp~AvWvm 216 (333)
T PF05089_consen 169 L--------YG-TDHIYAADPFNEGGPPSG-DPEYLANVSKAVYKAMQAADPDAVWVM 216 (333)
T ss_dssp H--------H----SEEE--TTTTS---TT-S---HHHHHHHHHHHHHHH-TT-EEEE
T ss_pred h--------cC-CCceeCCCccCCCCCCCC-chHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 7 88 667999999999987653 234477788889999999999986554
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=86.31 E-value=1.9 Score=47.31 Aligned_cols=59 Identities=19% Similarity=0.295 Sum_probs=38.7
Q ss_pred HHHHHHHCCCCEEEEccccCC---------------CCCCC---ccCCCCCCh-hhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 73 AFHEAASHGLTVARTWAFSDG---------------GYRPL---QRSPGSYNE-QMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~---------------~~~~l---q~~pg~~~~-~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.|+.||++|+|+|=+-...+. +|.+. .+.| .|.. ...+.|..+|++|+++||+||+++.
T Consensus 189 ~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~-~y~~~g~~~efk~LV~~~H~~GI~VIlDvV 266 (688)
T TIGR02100 189 MIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEP-RYLASGQVAEFKTMVRALHDAGIEVILDVV 266 (688)
T ss_pred hhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccccCh-hhcCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 489999999999998332111 11110 1111 1210 1256799999999999999999985
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.24 E-value=1.5 Score=45.87 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=42.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCC-----CCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGY-----RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~-----~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+-|++++++|+++|=+-.+-. .+| ..+.+.- ..++.++.++++|+++||+||+++.
T Consensus 27 dl~Gi~~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~-----Gt~~d~~~li~~~H~~gi~vi~D~V 98 (505)
T COG0366 27 DLKGITEKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHF-----GTEEDFKELVEEAHKRGIKVILDLV 98 (505)
T ss_pred cHHhHHHhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCccc-----CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 334566899999999999997732211 111 1112211 2367788999999999999999985
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=86.02 E-value=4.8 Score=44.67 Aligned_cols=81 Identities=21% Similarity=0.208 Sum_probs=52.7
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhH
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGL 113 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~l 113 (436)
+|..+.+-|++. -... +..--..+.+.++.++++|+++|=+...... +|. .+.+.-| ..+.|
T Consensus 500 ~~~eVmlQgF~W--ds~~--dg~w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yG-----T~~EL 570 (894)
T PLN02784 500 SGFEILCQGFNW--ESHK--SGRWYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYG-----TIDEL 570 (894)
T ss_pred CCceEEEEeEEc--CcCC--CCchHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcC-----CHHHH
Confidence 567788889883 2211 1001246788899999999999988543211 121 1111111 24578
Q ss_pred HHHHHHHHHcCCEEEEecc
Q 013811 114 DFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 114 D~~i~~a~~~Gi~vil~l~ 132 (436)
..+|++|+++||+||+++.
T Consensus 571 k~LI~a~H~~GIkVIlDiV 589 (894)
T PLN02784 571 KDLVKSFHEVGIKVLGDAV 589 (894)
T ss_pred HHHHHHHHHCCCEEEEEEC
Confidence 9999999999999999974
|
|
| >cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins | Back alignment and domain information |
|---|
Probab=85.54 E-value=2.7 Score=41.91 Aligned_cols=95 Identities=15% Similarity=0.228 Sum_probs=64.0
Q ss_pred HHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 115 FVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRN-PVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 115 ~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
.+++.|+++|++|+-+++..|. ++. .|.. .+..+ ++.+..+.+-+-+|++. |+=+
T Consensus 50 ~~idaAHknGV~Vlgti~~e~~--~~~----~~~~----------~lL~~~~~~~~~~a~kLv~lak~--------yGfD 105 (339)
T cd06547 50 DWINAAHRNGVPVLGTFIFEWT--GQV----EWLE----------DFLKKDEDGSFPVADKLVEVAKY--------YGFD 105 (339)
T ss_pred HHHHHHHhcCCeEEEEEEecCC--Cch----HHHH----------HHhccCcccchHHHHHHHHHHHH--------hCCC
Confidence 5788999999999999887654 222 2221 23334 66667777778888887 6555
Q ss_pred CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 194 p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+|.|-=|-........+.+.+|++++.+..|+..|+-.|.
T Consensus 106 ----Gw~iN~E~~~~~~~~~~~l~~F~~~L~~~~~~~~~~~~v~ 145 (339)
T cd06547 106 ----GWLINIETELGDAEKAKRLIAFLRYLKAKLHENVPGSLVI 145 (339)
T ss_pred ----ceEeeeeccCCcHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Confidence 3444333333111135789999999999999999987775
|
The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod |
| >PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=85.47 E-value=1.9 Score=51.30 Aligned_cols=62 Identities=16% Similarity=0.254 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC---C---CC-----CCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD---G---GY-----RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d---~---~~-----~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
-..+.+.|++++++|+|+|=+-.+.. + +| ..+.|.-| ..+.|+.++++|+++||+||+++.-
T Consensus 757 f~~~~~~l~Yl~~LGv~~i~lsPi~~a~~gs~hGYdv~D~~~idp~lG-----~~edf~~Lv~~ah~~Gi~vilDiV~ 829 (1693)
T PRK14507 757 FADAEAILPYLAALGISHVYASPILKARPGSTHGYDIVDHSQINPEIG-----GEEGFERFCAALKAHGLGQLLDIVP 829 (1693)
T ss_pred HHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCCCCCCCCCCccCcccC-----CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 35788999999999999997732211 1 11 12222222 3667899999999999999999863
|
|
| >PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 | Back alignment and domain information |
|---|
Probab=85.24 E-value=2.7 Score=41.87 Aligned_cols=150 Identities=18% Similarity=0.244 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-------CCC---------CCChhhhhhHHHHHHHHHHcCCEEEEe
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-------SPG---------SYNEQMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-------~pg---------~~~~~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
.+.+++.++.|+..++|++-++.-.+-.|+ ++. ..| .|. -+.++.+++.|+++||.||+.
T Consensus 17 ~~~ik~~id~ma~~k~N~lhlhl~D~~~~~-~~~~~~p~l~~~ga~~~~~~~~~yT---~~di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 17 VDTIKRLIDQMAYYKLNVLHLHLSDDQGFR-LESKSYPELTEKGAYRPSDAGGYYT---KEDIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp HHHHHHHHHHHHHTT-SEEEEEEESSTCB--BEBSTSTHHHHTTTESTTCTESEBE---HHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEecCCCCc-cccCCCccccccCccccccccccCC---HHHHHHHHHHHHHcCCceeee
Confidence 478999999999999999998654332232 111 112 344 356789999999999999998
Q ss_pred cccCCCCCCChhhhhhHHhhcCCC-------C--C---C---CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCc
Q 013811 131 LANNYDSFGGKKQYVNWARSQGQF-------L--T---S---DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT 195 (436)
Q Consensus 131 l~~~w~~~gg~~~y~~W~~~~G~~-------~--~---~---~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~ 195 (436)
+-. .|.......+...-+.. . . . ..-..++|++.+..++.+++++.- +. .+.
T Consensus 93 id~----PGH~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~--------f~-~~~ 159 (351)
T PF00728_consen 93 IDT----PGHAEAWLKAYPELGCSAWPEDKSWPNSTCWYPDNGVLDPSNPETYEFLKDLLDEVADL--------FP-SKY 159 (351)
T ss_dssp EEE----SSS-HHHHHHHHHHCCCHTTCSSSCEEEETTSEEEEEE-TTSHHHHHHHHHHHHHHHHH--------HT-SSE
T ss_pred ccC----chHHHHHHHhCchhhccccccccccccccccCCCcccCCCCcHHHHHHHHHHHHHHHhh--------CC-CCe
Confidence 743 23222222221111110 0 0 0 011235688888888899998877 55 332
Q ss_pred EEEEEe-ecCCCCC---CCC------------C-hHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 196 IMAWEL-MNEPRCT---SDP------------S-GRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 196 I~~weL-~NEp~~~---~~~------------~-~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+.| +-|.... .++ + .+....+++++.+.+++.... ++.
T Consensus 160 ---iHiGgDEv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~v~~~g~~-~~~ 214 (351)
T PF00728_consen 160 ---IHIGGDEVNYNCWNNSPECQAWMKQNGLTDPNDLFQYFVNRLADIVKKHGKK-PII 214 (351)
T ss_dssp ---EEEE-TSTTTHHHHCHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTTSE-EEE
T ss_pred ---EEeCCcccccccccCCHHHhhHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-EEE
Confidence 345 4555421 000 0 123445678889999987665 444
|
2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C .... |
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=85.04 E-value=2 Score=50.12 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=39.5
Q ss_pred HHHHHHHHCCCCEEEEcc-ccCCC--------------CCCC---ccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 72 TAFHEAASHGLTVARTWA-FSDGG--------------YRPL---QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~-~~d~~--------------~~~l---q~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+.|+++|++|+|+|=+-. +.... |... .+.| .|.....+.+..+|++|+++||+||+++.
T Consensus 191 ~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp-~yg~~~~~efk~lV~~~H~~GI~VILDvV 268 (1221)
T PRK14510 191 EAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDP-RLAPGGEEEFAQAIKEAQSAGIAVILDVV 268 (1221)
T ss_pred hhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcCh-hhccCcHHHHHHHHHHHHHCCCEEEEEEc
Confidence 568899999999999833 21100 1110 1111 12112456899999999999999999975
|
|
| >KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.48 E-value=42 Score=33.86 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe--ecCCCCCCCC---------ChHHHHHHHHHH-HHHhhccCC-
Q 013811 166 VVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL--MNEPRCTSDP---------SGRTIQAWITEM-ASYVKSIDR- 232 (436)
Q Consensus 166 ~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL--~NEp~~~~~~---------~~~~~~~w~~~~-~~~Ir~~Dp- 232 (436)
.+-+.|.+|.-.+++. |..+ .|..|.| .|||....+. +++.-+.+++.- --++++...
T Consensus 226 ~yhqtya~YfvkFlea--------Y~~~-gi~FWglt~qNEPstG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa~s~~~ 296 (518)
T KOG2566|consen 226 IYHQTYARYFVKFLEA--------YAKH-GIQFWGLTTQNEPSTGSDKKWKWQTLGFTAETQRDFIKKDLGPALASSKTT 296 (518)
T ss_pred hhHHHHHHHHHHHHHH--------HHhc-CceEEeecccCCCCcCcccCCceeecccCHHHHHHHHHHhcchhhhcCCcC
Confidence 3445666666666666 7766 4666876 8999987653 345555555432 233333211
Q ss_pred -CCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHH
Q 013811 233 -NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEH 311 (436)
Q Consensus 233 -~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~ 311 (436)
+.-|.+-..+ . ..-|.|.. .-+....+..+++=+.+|.|.+-..+.. |+....+
T Consensus 297 knvkllilDD~-R--------g~LP~Wad-tvlnDpeAakYv~GIaVHwY~df~~pa~---------------~L~eTh~ 351 (518)
T KOG2566|consen 297 KNVKLLILDDQ-R--------GLLPHWAD-TVLNDPEAAKYVHGIAVHWYQDFLEPAK---------------HLDETHR 351 (518)
T ss_pred CceEEEEecCC-c--------cCCCccch-hhccChhhhhhccceEEEeeccccChhh---------------hhhhHHh
Confidence 2222221111 0 01122210 0011123457888889999987322211 1111111
Q ss_pred -hcCCcEEEEecCCC--CCC-C---CCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc--CCCCCCCCCc
Q 013811 312 -ILRKPILLAEFGKS--RKD-P---GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT--EGMDAFRDGY 377 (436)
Q Consensus 312 -~~~kPv~i~EfG~~--~~~-~---g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~--~g~~~~~dg~ 377 (436)
..++=|+=+|-..- ..+ + .++ ...+|-.++++. +.. -+.||.=|.+.- .|.++|-++|
T Consensus 352 ~hP~~fifgTEAc~Gy~~~d~v~~Gswd--rae~yasdii~d----lnn--~vtGWtdwNl~Ld~~GGP~wv~nf 418 (518)
T KOG2566|consen 352 KHPNTFIFGTEACAGYKSKDGVDLGSWD--RAEQYASDIITD----LNN--HVTGWTDWNLILDAQGGPNWVSNF 418 (518)
T ss_pred hCCCeEEEeehhccccccccCccccchh--hHHHHHHHHHHh----hhh--hccceeeeeeEecCcCCchhHhcc
Confidence 24555666664321 111 1 122 222343444433 322 578999999874 3456775554
|
|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
Probab=84.26 E-value=31 Score=34.01 Aligned_cols=70 Identities=19% Similarity=0.302 Sum_probs=46.4
Q ss_pred CChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 163 RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 163 ~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
.+++.++.+.++++.++++ -+.|.-+ .++=+|+..+|.........+.+.++++++++++|+..|+.+|.
T Consensus 141 ~~~~W~~il~~rl~~l~~k--GfDGvfL---D~lDsy~~~~~~~~~~~~~~~~m~~~i~~Ia~~ar~~~P~~~II 210 (315)
T TIGR01370 141 WDPEWKAIAFSYLDRVIAQ--GFDGVYL---DLIDAFEYWAENGDNRPGAAAEMIAFVCEIAAYARAQNPQFVII 210 (315)
T ss_pred ccHHHHHHHHHHHHHHHHc--CCCeEee---ccchhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4678888888888887765 3444311 23445676666543211134568889999999999999987665
|
Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. |
| >cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=83.10 E-value=23 Score=34.94 Aligned_cols=63 Identities=25% Similarity=0.309 Sum_probs=45.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCcc--C-CCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQR--S-PGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq~--~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+++.++.|+..++|++-++.-.+-+| |.+.. + .|.|.. +.+..+++-|+++||.||+.+-
T Consensus 17 ~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT~---~di~elv~yA~~rgI~vIPEId 89 (311)
T cd06570 17 VAVIKRQLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKASDGLYYTQ---EQIREVVAYARDRGIRVVPEID 89 (311)
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEecCCCceeecCCCccccccCCCCCccCH---HHHHHHHHHHHHcCCEEEEeec
Confidence 47899999999999999999865433233 22211 1 124553 4667899999999999999874
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.60 E-value=3.4 Score=45.02 Aligned_cols=58 Identities=28% Similarity=0.470 Sum_probs=40.4
Q ss_pred HHHHHHCCCCEEEEcc-c--cCC------------CCCCC---ccCCCCCC-----hhhhhhHHHHHHHHHHcCCEEEEe
Q 013811 74 FHEAASHGLTVARTWA-F--SDG------------GYRPL---QRSPGSYN-----EQMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 74 l~~l~~~G~N~vRi~~-~--~d~------------~~~~l---q~~pg~~~-----~~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
|+.+|++|+++|.+.. + .+. +|+++ -|. +.|. ...+..++.+|.+++++||.||++
T Consensus 206 i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~-~~Yss~p~p~~~i~EfK~mV~~lHkaGI~VILD 284 (697)
T COG1523 206 IDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPE-GRYASNPEPATRIKEFKDMVKALHKAGIEVILD 284 (697)
T ss_pred HHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCC-ccccCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999999933 2 110 12221 111 1222 235788999999999999999999
Q ss_pred cc
Q 013811 131 LA 132 (436)
Q Consensus 131 l~ 132 (436)
+.
T Consensus 285 VV 286 (697)
T COG1523 285 VV 286 (697)
T ss_pred Ee
Confidence 85
|
|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Probab=82.54 E-value=10 Score=38.15 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 114 DFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 114 D~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
+.++..|+++|++|++.-. .+ .....++..++.|.+-+-.++++ |.=+
T Consensus 67 ~~~~~~A~~~~v~v~~~~~--------~~----------------~~~l~~~~~R~~fi~siv~~~~~--------~gfD 114 (358)
T cd02875 67 DELLCYAHSKGVRLVLKGD--------VP----------------LEQISNPTYRTQWIQQKVELAKS--------QFMD 114 (358)
T ss_pred HHHHHHHHHcCCEEEEECc--------cC----------------HHHcCCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 3788999999999987521 00 11245788899898888888887 5444
Q ss_pred CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeC
Q 013811 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 194 p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG 239 (436)
---+-||--+.. ...+.+.+..+++++.+.+++..++-+|++.
T Consensus 115 GIdIDwE~p~~~---~~~d~~~~t~llkelr~~l~~~~~~~~Lsva 157 (358)
T cd02875 115 GINIDIEQPITK---GSPEYYALTELVKETTKAFKKENPGYQISFD 157 (358)
T ss_pred eEEEcccCCCCC---CcchHHHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 334456633221 1123567889999999999988777777764
|
Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 436 | ||||
| 1rh9_A | 373 | Family Gh5 Endo-Beta-Mannanase From Lycopersicon Es | 1e-126 | ||
| 3pz9_A | 383 | Native Structure Of Endo-1,4-Beta-D-Mannanase From | 1e-47 | ||
| 4awe_A | 387 | The Crystal Structure Of Chrysonilia Sitophila Endo | 4e-33 | ||
| 1qno_A | 344 | The 3-d Structure Of A Trichoderma Reesei B-mannana | 2e-32 | ||
| 1uuq_A | 440 | Exo-mannosidase From Cellvibrio Mixtus Length = 440 | 1e-28 |
| >pdb|1RH9|A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) Length = 373 | Back alignment and structure |
|
| >pdb|3PZ9|A Chain A, Native Structure Of Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila Rku-1 Length = 383 | Back alignment and structure |
|
| >pdb|4AWE|A Chain A, The Crystal Structure Of Chrysonilia Sitophila Endo-Beta-D- 1,4-Mannanase Length = 387 | Back alignment and structure |
|
| >pdb|1QNO|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From Glycoside Hydrolase Family 5 Length = 344 | Back alignment and structure |
|
| >pdb|1UUQ|A Chain A, Exo-mannosidase From Cellvibrio Mixtus Length = 440 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 388 bits (998), Expect = e-134
Identities = 213/374 (56%), Positives = 273/374 (72%), Gaps = 3/374 (0%)
Query: 28 AGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVART 87
+ + F+ T G+HF LNG + NGFNAYWLMY+A DPS R KV+ F +A+ + + VART
Sbjct: 2 SNNNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVART 61
Query: 88 WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNW 147
WAFS GG RPLQ +PG YNEQMF+GLDFVI+EA+KYGI LI+SL NN+D+FGGKKQYV W
Sbjct: 62 WAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEW 121
Query: 148 ARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207
A +GQ LTSDDDFF NP+VKG+YKN +K VL R NT T + YKDDPTI++WEL+NEPRC
Sbjct: 122 AVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRC 181
Query: 208 TSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN 267
SD SG+T Q W+ EMA Y+KSID NHLLE GLEGFYG Q + GT+F++N
Sbjct: 182 PSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYI--FGTNFISN 239
Query: 268 NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRK 327
N + GIDF T+H YP+QWL Q + + W+ HI D+ +L+KP+L+AEFGKS K
Sbjct: 240 NQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDS-KMLKKPLLIAEFGKSTK 298
Query: 328 DPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPST 387
PGY+ +RD F +Y I++ AK GG GGLFWQ+L +GM +F DGY++VL +SPST
Sbjct: 299 TPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPST 358
Query: 388 ANVITQQAHKLYQI 401
+ VI Q+ +L ++
Sbjct: 359 SRVILLQSLRLSKL 372
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 313 bits (802), Expect = e-103
Identities = 97/422 (22%), Positives = 167/422 (39%), Gaps = 63/422 (14%)
Query: 28 AGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVAS--DPSQRSKVSTAFHEAASHGLTVA 85
A + F+R G HF L G Y G N ++ Y+ + + R +++ + G+
Sbjct: 20 AHEHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNL 79
Query: 86 RTWAFSDGGYRP------LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139
R A S+ + G+Y+E + +GLD+++ E K + ++L N + G
Sbjct: 80 RVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSG 139
Query: 140 GKKQYVNWARSQ-----------GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188
G QY+ W + F+ F+R+ + Y+ ++ ++ R N+ G
Sbjct: 140 GMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGK 199
Query: 189 HYKDDPTIMAWELMNEPRCTSD----PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
Y DD TIM+W+L NEPR + + W+ A+Y+K++D +HL+ +G EG
Sbjct: 200 AYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEM 259
Query: 245 GQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRD------QLSFL 298
G F+ + P ID+ T H + W +
Sbjct: 260 GSVND-----------MQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKA 308
Query: 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYS----TYQRDVMFNTVYYKIYSSAKRG 354
N++ HI A L KP++L EFG R Y+ T RD F V+ + +S ++G
Sbjct: 309 QNYMRAHIDVA-KQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQG 367
Query: 355 GAAAGGLFWQLLTEGMDAFRD------------------GYEIVLSQSPSTANVITQQAH 396
+AG W G + G V ST ++ +
Sbjct: 368 EPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAIMKEFNA 427
Query: 397 KL 398
+
Sbjct: 428 RF 429
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 306 bits (785), Expect = e-101
Identities = 124/402 (30%), Positives = 184/402 (45%), Gaps = 53/402 (13%)
Query: 25 HVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTV 84
H G +LNG + G N Y++ Y ++ + + A G+ V
Sbjct: 7 HHHHSSGL--VPRGSHMLNGKEFRFIGSNNYYMHYKSNR-----MIDSVLESARDMGIKV 59
Query: 85 ARTWAFSDG------GYRPLQRSPGSYN--------EQMFKGLDFVIAEARKYGIKLILS 130
R W F DG + PG + + F+ LD+ IA+A++ GIKLI+
Sbjct: 60 LRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIV 119
Query: 131 LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190
L NN+D FGG QYV W T DDF+R+ +K YK + ++N N +TG+ Y
Sbjct: 120 LVNNWDDFGGMNQYVRWFGG-----THHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPY 174
Query: 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQ 250
+++PTIMAWEL NE RC +D SG T+ W+ EM+SY+KS+D NHL+ G EGF+
Sbjct: 175 REEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEGFFSNYEGF 234
Query: 251 RKRVNP-----NLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTH 305
+ N G D+ I +DF T H YP W S + + W++ H
Sbjct: 235 KPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGVSPE--NYAQWGAKWIEDH 292
Query: 306 IQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL 365
I+ A+ + KP++L E+G + P R ++ +Y G +FW L
Sbjct: 293 IKIAKE-IGKPVVLEEYGIPKSAPVN----RTAIYRLWNDLVYDL-----GGDGAMFWML 342
Query: 366 LTEGMDAFR---------DGYEIVLSQSPSTANVITQQAHKL 398
G + R DG+ IV SP A +I + A
Sbjct: 343 AGIGEGSDRDERGYYPDYDGFRIVNDDSP-EAELIREYAKLF 383
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 270 bits (690), Expect = 1e-87
Identities = 94/384 (24%), Positives = 151/384 (39%), Gaps = 55/384 (14%)
Query: 29 GDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTW 88
F+ G+ F ++G + + G N YW ++ + + V + F +S GL V R W
Sbjct: 1 ASSFVTISGTQFNIDGKVGYFAGTNCYWCSFLTN----HADVDSTFSHISSSGLKVVRVW 56
Query: 89 AFSDGGYRP-----------LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137
F+D +P S + + LD+V+ A ++ +KLI+ NN+
Sbjct: 57 GFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSD 116
Query: 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197
+GG YVN + ++ N + Y+ ++ V++R Y + I
Sbjct: 117 YGGINAYVNAFGG------NATTWYTNTAAQTQYRKYVQAVVSR--------YANSTAIF 162
Query: 198 AWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN 257
AWEL NEPRC S I W T ++ YVKS+D NHL+ G EG +
Sbjct: 163 AWELGNEPRCN-GCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYTYG 221
Query: 258 LDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPI 317
GTDF N I +DF T H YPD W + ++ N W+ TH KP
Sbjct: 222 E--GTDFAKNVQIKSLDFGTFHLYPDSWGT------NYTWGNGWIQTHAAACL-AAGKPC 272
Query: 318 LLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ---LLTEGMDAFR 374
+ E+G + +++ G +FWQ G +
Sbjct: 273 VFEEYGAQQNPCTN------------EAPWQTTSLTTRGMGGDMFWQWGDTFANGAQSNS 320
Query: 375 DGYEIVLSQSPSTANVITQQAHKL 398
D Y + + S ++ +
Sbjct: 321 DPYTVWYNSSNWQC-LVKNHVDAI 343
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 238 bits (608), Expect = 2e-75
Identities = 62/398 (15%), Positives = 117/398 (29%), Gaps = 80/398 (20%)
Query: 29 GDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVA-----SDPSQRSKVSTAFHEAASHGLT 83
+ G++ NG+ F +G N W+ Y +S + + SHG
Sbjct: 1 AAVRLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGN 60
Query: 84 VARTWAFSDGGYRPLQRSPGSY---NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGG 140
R W +G P + G + + + + A+++ I + +L N
Sbjct: 61 SVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGA----- 115
Query: 141 KKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE 200
Q + ++ Y + +K + N K++ + W+
Sbjct: 116 --------VKQSTHYRLNGLMVDTRKLQSYIDHALKPMANA--------LKNEKALGGWD 159
Query: 201 LMNEPRCTSDP--------------------------SGRTIQAWITEMASYVKSIDRNH 234
+MNEP P S + I ++ A+ +K +D
Sbjct: 160 IMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGA 219
Query: 235 LLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQ 294
++ G + N D + F VH+Y Q
Sbjct: 220 MVTVGSWNMKADTDAMGFH-NLYSDHCLVKAGGKQSGTLSFYQVHTYDWQN--------- 269
Query: 295 LSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRG 354
F N H + L+KP+++ EF + + MF Y K Y
Sbjct: 270 -HFGNESPFKH-SFSNFRLKKPMVIGEFNQEHGAGMS----SESMFEWAYTKGY------ 317
Query: 355 GAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVIT 392
+G W + G + + S++
Sbjct: 318 ---SGAWTWSRTDVSWNNQLRGMQHLKSRTDHGQVQFG 352
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 94.3 bits (234), Expect = 2e-21
Identities = 55/358 (15%), Positives = 102/358 (28%), Gaps = 57/358 (15%)
Query: 28 AGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDP--SQRSKVSTAFHEAASHGLTV 84
AG G+ T G L N G N + + + S G
Sbjct: 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNT 60
Query: 85 ARTWAFSD--------GGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136
R D Q + + +D ++A A + G+++IL
Sbjct: 61 IRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDC 120
Query: 137 SFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196
S ++ + V + + + ++ + RY K +PT+
Sbjct: 121 SGQS------------------ALWYTSSVSEATWISDLQALAQRY--------KGNPTV 154
Query: 197 MAWELMNEPRCTSDPSGRT----IQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRK 252
+ ++L NEP + + + V S++ N L+ Y +
Sbjct: 155 VGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWG 214
Query: 253 RVNPNLDIGTDF-----VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQ 307
NL + V N L+ YP W S + + W
Sbjct: 215 G---NLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMP--GIWNKNWGY 269
Query: 308 DAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL 365
P+ L EFG + + T+ + ++ Y + + FW
Sbjct: 270 LFNQ-NIAPVWLGEFGTTLQSTTDQTWLKTLV---QYLRPTAQYGADS--FQWTFWSW 321
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 87.3 bits (215), Expect = 8e-19
Identities = 50/344 (14%), Positives = 94/344 (27%), Gaps = 38/344 (11%)
Query: 27 EAGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVA 85
S+ +G GFN A D + + E A G
Sbjct: 24 SGSGSGTALTPSYLKDDDGRSLILRGFNTASSAKSAPDGMPQFTEADLAREYADMGTNFV 83
Query: 86 RTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSL-ANNYDSFGGKKQY 144
R + S +R ++ +PG Y++Q ++ + + G K++L + + Y +
Sbjct: 84 R-FLIS---WRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGN 139
Query: 145 VNWARSQG-------QFLTSDDDFFRNPVVKGYYKNLIKTVL--NRYNTFTGI------- 188
P + YY N +NT
Sbjct: 140 SGNGAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHY 199
Query: 189 ---------HYKDDPTIMAWELMNEPRCTS----DPSGRTIQAWITEMASYVKSIDRNHL 235
+ D+ ++A++LMNEP S + A ++ +D++
Sbjct: 200 AKAWRAVADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTW 259
Query: 236 LEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQL 295
+ + G + + D + +
Sbjct: 260 VCVAPQA-IGVNQGLPSGLTKIDDPRAG--QQRIAYCPHLYPLPLDIGDGHEGLARTLTD 316
Query: 296 SFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVM 339
++ W A + PI+L FG PG Y V
Sbjct: 317 VTIDAWRANTAHTARVLGDVPIILGSFGLDTTLPGARDYIERVY 360
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 2e-10
Identities = 43/285 (15%), Positives = 83/285 (29%), Gaps = 54/285 (18%)
Query: 74 FHEAASHGLTVAR----TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
F A R +SD G +P E F+ +D VI KYGI + +
Sbjct: 42 FLWMAQWDFNFVRIPMCHLLWSDRG------NPFIIREDFFEKIDRVIFWGEKYGIHICI 95
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDD-DFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188
+ G + + +++ + + + + RY
Sbjct: 96 ----SLHRAPG---------YSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYK----- 137
Query: 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAW---ITEMASYVKSIDRNHLLEAGLEGFYG 245
T +++ L+NEP DP +++ I + ++ ID L+ ++G
Sbjct: 138 --GISSTHLSFNLINEPPFP-DPQIMSVEDHNSLIKRTITEIRKIDPERLI--IIDGLGY 192
Query: 246 QSTPQRKRVNPNLDI--------GTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQL-S 296
+ P N + DF +R++L
Sbjct: 193 GNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLE 252
Query: 297 FLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYST--YQRDVM 339
W+ + + E G K P + D++
Sbjct: 253 HYLTWIKLRQKGI------EVFCGEMGAYNKTPHDVVLKWLEDLL 291
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 6e-09
Identities = 36/265 (13%), Positives = 72/265 (27%), Gaps = 53/265 (20%)
Query: 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161
P + ++ +I +A GI ++L +Y G W +DF
Sbjct: 125 PDLRGLDSLQIMEKIIKKAGDLGIFVLL----DYHRIGCTHIEPLWY---------TEDF 171
Query: 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTI----- 216
+ N V R+ ++ +L NEP + P
Sbjct: 172 SEE-----DFINTWIEVAKRF--------GKYWNVIGADLKNEPHSVTSPPAAYTDGTGA 218
Query: 217 -----------QAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265
+ + + + L+ F T + N G + +
Sbjct: 219 TWGMGNPATDWNLAAERIGKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLM 278
Query: 266 ANNLIPGIDFA-----TVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRK---PI 317
A P + H + + F +N D ++ + +
Sbjct: 279 AVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNLPDIWYHHFGYVKLELGYSV 338
Query: 318 LLAEFG---KSRKDPGYSTYQRDVM 339
++ EFG DP +Q ++
Sbjct: 339 VIGEFGGKYGHGGDPRDVIWQNKLV 363
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 4e-08
Identities = 35/268 (13%), Positives = 68/268 (25%), Gaps = 71/268 (26%)
Query: 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
STA A G R SDGG + + + VI A + + ++
Sbjct: 33 ASTAIPAIAEQGANTIRI-VLSDGGQ---------WEKDDIDTIREVIELAEQNKMVAVV 82
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189
+ G+ SD + + + +
Sbjct: 83 ----------------EVHDATGRDSRSDLN---------RAVDYWIEMKDA-------- 109
Query: 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSI---DRNHLLEAGLEGFYGQ 246
+ + NE + D S AW + + H L + G
Sbjct: 110 LIGKEDTVIINIANEWYGSWDGS-----AWADGYIDVIPKLRDAGLTHTL---MVDAAGW 161
Query: 247 STPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHI 306
+ + D+ N + ++H Y ++ R + + +
Sbjct: 162 GQYPQSIHDYGQDVFNADPLKNTM-----FSIHMYEYAGGDANTVRSNIDRVIDQ----- 211
Query: 307 QDAEHILRKPILLAEFGKSRKDPGYSTY 334
+++ EFG D T
Sbjct: 212 -------DLALVIGEFGHRHTDVDEDTI 232
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 35/167 (20%)
Query: 74 FHEAASHGLTVART----WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
A G R + G Y E +D + +KY + L+L
Sbjct: 34 IETIAEAGFDHVRLPFDYPIIESDD------NVGEYKEDGLSYIDRCLEWCKKYNLGLVL 87
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189
+ G + Q + F +P + + ++ + + R
Sbjct: 88 ----DMHHAPG---------YRFQDFKT-STLFEDPNQQKRFVDIWRFLAKR-------- 125
Query: 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236
Y ++ +A+EL+N+ +P + E ++ ID L
Sbjct: 126 YINEREHIAFELLNQVV---EPDSTRWNKLMLECIKAIREIDSTMWL 169
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 40/238 (16%)
Query: 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161
G+ + D ++ G I+ + N+AR G +
Sbjct: 75 GGNLDSTSISKYDQLVQGCLSLGAYCIVDI-------------HNYARWNGGIIGQGG-- 119
Query: 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIT 221
+ +L + ++Y + + +MNEP D + T A +
Sbjct: 120 ----PTNAQFTSLWSQLASKY--------ASQSRVW-FGIMNEPH---DVNINTWAATVQ 163
Query: 222 EMASYVKSID-RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF--VANNLIPGIDFATV 278
E+ + +++ + + + L T+ NLI V
Sbjct: 164 EVVTAIRNAGATSQFISLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLI-----FDV 218
Query: 279 HSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQR 336
H Y D S ++ + ++ + +L E G +
Sbjct: 219 HKYLDSDNSGTHAECTTNNIDGAFSPLATWLRQN-NRQAILTETGGGNVQSCIQDMCQ 275
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 40/311 (12%), Positives = 79/311 (25%), Gaps = 86/311 (27%)
Query: 24 LHVEAGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLT 83
+V+ G+ G F++ G + + STA A G
Sbjct: 25 FYVD-GNTLYDANGQPFVMKGINHGHAWYKDTA--------------STAIPAIAEQGAN 69
Query: 84 VARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143
R SDGG + + + VI A + + ++
Sbjct: 70 TIRI-VLSDGGQ---------WEKDDIDTVREVIELAEQNKMVAVV-------------- 105
Query: 144 YVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMN 203
+ G+ SD D + + + + + N
Sbjct: 106 --EVHDATGRDSRSDLD---------RAVDYWIEMKDA--------LIGKEDTVIINIAN 146
Query: 204 EPRCTSDPSGRTIQAWITEMASYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDI 260
E + D + AW + + H L + G + + D+
Sbjct: 147 EWYGSWDGA-----AWADGYIDVIPKLRDAGLTHTL---MVDAAGWGQYPQSIHDYGQDV 198
Query: 261 GTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLA 320
N I ++H Y ++ R + + + +++
Sbjct: 199 FNADPLKNTI-----FSIHMYEYAGGDANTVRSNIDRVIDQ------------DLALVIG 241
Query: 321 EFGKSRKDPGY 331
EFG D
Sbjct: 242 EFGHRHTDGDV 252
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 3e-07
Identities = 34/228 (14%), Positives = 80/228 (35%), Gaps = 56/228 (24%)
Query: 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRN 164
+++ + VI+ ++ + +L +D+ G +Q + A + Q + D++
Sbjct: 59 WSKNGPSDVANVISLCKQNRLICML---EVHDTTGYGEQ--SGASTLDQAV----DYWIE 109
Query: 165 PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMA 224
+K+ + + + + NEP T+ AW T+ +
Sbjct: 110 ----------LKS-----------VLQGEEDYVLINIGNEP---YGNDSATVAAWATDTS 145
Query: 225 SYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSY 281
+ ++ + H L +GQ R N + +D N + ++H Y
Sbjct: 146 AAIQRLRAAGFEHTLVVDAPN-WGQDWTNTMRNNADQVYASD-PTGNTV-----FSIHMY 198
Query: 282 PDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329
+S+ + ++L+ + P+++ EFG D
Sbjct: 199 GVYSQAST--------ITSYLEHFVNA-----GLPLIIGEFGHDHSDG 233
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 5e-07
Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 55/251 (21%)
Query: 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161
P ++ FK +D VI A K G+ +++++ + + +++ + + +
Sbjct: 65 PYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIAD---- 120
Query: 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIT 221
YKD P + +E++N P + + +
Sbjct: 121 ---------------------------RYKDYPETLFFEILNAPHG--NLTPEKWNELLE 151
Query: 222 EMASYVKSIDRNHLLEAGLEGF-YGQSTPQRKRVNPNLDIGTDFVANNLI-------PGI 273
E ++SID+ H + + +G + K P + N I P
Sbjct: 152 EALKVIRSIDKKHTI--IIGTAEWGGISALEKLSVPKWE-------KNSIVTIHYYNPFE 202
Query: 274 DFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRK---PILLAEFGKSRKDPG 330
+ + + L E +K PI + EFG RK
Sbjct: 203 FTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADL 262
Query: 331 YS--TYQRDVM 339
S + V+
Sbjct: 263 ESRIKWTSFVV 273
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Length = 463 | Back alignment and structure |
|---|
Score = 50.9 bits (121), Expect = 5e-07
Identities = 50/367 (13%), Positives = 99/367 (26%), Gaps = 82/367 (22%)
Query: 31 GFIR--TRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVART 87
G + G + NG +F G + L + + G V +
Sbjct: 16 GKLVVSEEGRYLKHENGTPFFWLGETGWLLPERLNRDEAEYYLEQC----KRRGYNVIQV 71
Query: 88 --------------WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
++ +DG + + +D++I A K G+ + +
Sbjct: 72 QTLNNVPSMNIYGQYSMTDGY--NFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCIW 129
Query: 134 NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193
V+ + D Y F YKD+
Sbjct: 130 GS--------PVSHGE-----MNVDQA-------------------KAYGKFLAERYKDE 157
Query: 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253
P I+ W + D G A +A+ +K+ID+NHL+ ++
Sbjct: 158 PNII-WFIGG------DIRGDVKTAEWEALATSIKAIDKNHLM--TFHPRGRTTSATWFN 208
Query: 254 VNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHIL 313
P LD F + H Q + + + + +
Sbjct: 209 NAPWLDFNM------------FQSGHRRYGQRFGDGDYPIEENTEEDNWRFVERSMAMKP 256
Query: 314 RKPILLAE-----FGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368
KP++ E D ++ + Y+ +++ + G Q +
Sbjct: 257 MKPVIDGEPIYEEIPHGLHDENELLWKDYDVRRYAYWSVFAGS-FGHTYGHNSIMQFIKP 315
Query: 369 GMDAFRD 375
G+
Sbjct: 316 GVGGAYG 322
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 30/260 (11%), Positives = 72/260 (27%), Gaps = 65/260 (25%)
Query: 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
+TA A+ G R SDGG + + + + +I+ A + +L
Sbjct: 41 ATTAIEGIANTGANTVRI-VLSDGGQ---------WTKDDIQTVRNLISLAEDNNLVAVL 90
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189
G + R+ D++ +++
Sbjct: 91 ----EVHDATGYDSIASLNRAV--------DYWIE----------MRS-----------A 117
Query: 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTP 249
+ + NE + D + + +++ N+ L + G
Sbjct: 118 LIGKEDTVIINIANEWFGSWDGA--AWADGYKQAIPRLRNAGLNNTL---MIDAAGWGQF 172
Query: 250 QRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDA 309
+ + ++ N + ++H Y ++S R + + N
Sbjct: 173 PQSIHDYGREVFNADPQRNTM-----FSIHMYEYAGGNASQVRTNIDRVLNQ-------- 219
Query: 310 EHILRKPILLAEFGKSRKDP 329
+++ EFG +
Sbjct: 220 ----DLALVIGEFGHRHTNG 235
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 4e-06
Identities = 37/301 (12%), Positives = 85/301 (28%), Gaps = 72/301 (23%)
Query: 31 GFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA 89
G ++ G+ +GN G + + + + + S+ A + R +
Sbjct: 9 GKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDHCLTD----SSLDALAYDWKADIIR-LS 63
Query: 90 FSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149
+ + + +I A G+ +I+ ++ + N R
Sbjct: 64 MY-----IQEDGYETNPRGFTDRMHQLIDMATARGLYVIV----DWHILTPGDPHYNLDR 114
Query: 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209
++ FF + ++ +E+ NEP +
Sbjct: 115 AK--------TFFAEIAQ---------------------RHASKTNVL-YEIANEP---N 141
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269
S +I+++ E+ ++ D + ++ G G+ + G +A N
Sbjct: 142 GVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGV--------SEGSGPAEIAANP 193
Query: 270 IPGI-DFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD 328
+ H Y N + L + P+ + EFG
Sbjct: 194 VNASNIMYAFHFYAASH--RDNYLNALREASELF-------------PVFVTEFGTETYT 238
Query: 329 P 329
Sbjct: 239 G 239
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 4e-06
Identities = 40/297 (13%), Positives = 93/297 (31%), Gaps = 75/297 (25%)
Query: 28 AGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVAR 86
A +G + +G+ + +G G +++ L + ++ + G+TV R
Sbjct: 32 AKNGQLSIKGTQLVNRDGKAVQLKGISSHGLQWYGEYVNK----DSLKWLRDDWGITVFR 87
Query: 87 TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146
A N + + + A++ GI +I+ ++
Sbjct: 88 -AAMYTA------DGGYIDNPSVKNKVKEAVEAAKELGIYVII----DWHILND------ 130
Query: 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR 206
G + + K ++K + Y + P ++ +E+ NEP
Sbjct: 131 -----GNPNQNKEKA------KEFFKEMSS------------LYGNTPNVI-YEIANEPN 166
Query: 207 CTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266
+ I+ + E+ S ++ D ++++ G + + N
Sbjct: 167 GDVNWKR-DIKPYAEEVISVIRKNDPDNIIIVGTGTWSQ---------DVNDAADDQLKD 216
Query: 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFG 323
N++ +H Y FL + + + PI + E+G
Sbjct: 217 ANVM-----YALHFYAG---------THGQFLRDKANYALSK-----GAPIFVTEWG 254
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 3e-05
Identities = 35/298 (11%), Positives = 72/298 (24%), Gaps = 69/298 (23%)
Query: 74 FHEAASHGLTVAR---TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS 130
G R +W + + S ++ + V+ + +IL
Sbjct: 67 IDAIKQKGFNTVRIPVSW------HPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVIL- 119
Query: 131 LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190
N V Q++ S + + +
Sbjct: 120 ---NTHHDVD---KVKGYFPSSQYMASSKKYITS-----------------VWAQIAARF 156
Query: 191 KDDPTIMAWELMNEPRCTSDPS--------------GRTIQAWITEMASYVKSIDRNHLL 236
+ + +E MNEPR + I + + V++ +
Sbjct: 157 ANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNAS 216
Query: 237 EAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLS 296
+ Y S + N +I +VH+Y + D
Sbjct: 217 RYLMCPGYVASPDGATNDYFRMPNDISGNNNKII-----VSVHAYCPWNFAGLAMAD--G 269
Query: 297 FLNNWLDTHIQDAEHILRK-------------PILLAEFGKSRKDPGYS--TYQRDVM 339
N W +D + P+++ E G K+ + Y +
Sbjct: 270 GTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYV 327
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 3e-05
Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 35/184 (19%)
Query: 74 FHEAASHGLTVART----WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
F AS G + R WAF P + LD I AR +K+ +
Sbjct: 79 FANIASQGFNLVRIPIGYWAFQILDDDPY------VSGLQESYLDQAIGWARNNSLKVWV 132
Query: 130 SL-----ANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184
L + N G + + +T N++ +L +Y+
Sbjct: 133 DLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVT---------------INVLNYILKKYS- 176
Query: 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFY 244
+ ++ EL+NEP + ++ Y+++ ++ + + F
Sbjct: 177 ----AEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQ 232
Query: 245 GQST 248
+
Sbjct: 233 PYNY 236
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 40/306 (13%), Positives = 84/306 (27%), Gaps = 76/306 (24%)
Query: 31 GFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA 89
G + + G G +++ L + Q + G+ V R A
Sbjct: 10 GQLSISNGELVNERGEQVQLKGMSSHGLQWY----GQFVNYESMKWLRDDWGINVFR-AA 64
Query: 90 FSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149
+ + + + + A I +I+ ++ +
Sbjct: 65 MYTSS------GGYIDDPSVKEKVKEAVEAAIDLDIYVII----DWHILSDNDPNIYKEE 114
Query: 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209
++ DFF Y D P ++ +E+ NEP +
Sbjct: 115 AK--------DFF---------------------DEMSELYGDYPNVI-YEIANEPNGSD 144
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269
G I+ + E+ +++ D N+++ G A+N
Sbjct: 145 VTWGNQIKPYAEEVIPIIRNNDPNNIIIVG---------------TGTWSQDVHHAADNQ 189
Query: 270 IPGIDFA-TVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD 328
+ + H Y N RDQ+ + + I ++E+G S
Sbjct: 190 LADPNVMYAFHFYAGTH--GQNLRDQVDYALDQ------------GAAIFVSEWGTSAAT 235
Query: 329 PGYSTY 334
+
Sbjct: 236 GDGGVF 241
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 41/299 (13%), Positives = 82/299 (27%), Gaps = 73/299 (24%)
Query: 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAF 90
+ G+ L G G + +W + T T+ R A
Sbjct: 3 EKLTVSGNQILAGGENTSFAGPSLFWSNTGWGAEKFYTA-ETVAKAKTEFNATLIR-AAI 60
Query: 91 SDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
G S E LD V+ A + +I+ ++
Sbjct: 61 GHGTSTG--GSLNFDWEGNMSRLDTVVNAAIAEDMYVII----------------DFHSH 102
Query: 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD 210
+ T R +++++ Y ++ +E+ NEP S
Sbjct: 103 EAH--TDQATAVR------FFEDVAT------------KYGQYDNVI-YEIYNEPLQISW 141
Query: 211 PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI 270
+ I+ + + +++ID ++L+ G P D + N I
Sbjct: 142 VN--DIKPYAETVIDKIRAIDPDNLIVVG---------------TPTWSQDVDVASQNPI 184
Query: 271 PGI-DFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD 328
T+H Y S + + ++ + + E+G D
Sbjct: 185 DRANIAYTLHFYAGTHGQS------------YRNKAQTALDNGI--ALFATEWGTVNAD 229
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 7e-05
Identities = 37/258 (14%), Positives = 76/258 (29%), Gaps = 70/258 (27%)
Query: 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161
P ++ + V+ A K + +I++ + + + +Y
Sbjct: 73 PYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKY----------------- 115
Query: 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWIT 221
+ K V +KD P + +E+ NEP P+ W
Sbjct: 116 ------GPVLVEIWKQVAQA--------FKDYPDKLFFEIFNEPAQNLTPT-----KWNE 156
Query: 222 EMASYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATV 278
+ I + + ++ ++ + + + D N+I +
Sbjct: 157 LYPKVLGEIRKTNPSRIV--IIDVPNWSNYSYVRELKLVDD-------KNII-----VSF 202
Query: 279 HSYPD--------QWLSSSNDRDQLSFLNNW----LDTHIQDAEHILRK---PILLAEFG 323
H Y +W+S + +W + H + +K PI L EFG
Sbjct: 203 HYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKYVSEWAKKNNVPIFLGEFG 262
Query: 324 KSRKDPGYST--YQRDVM 339
K S + + V
Sbjct: 263 AYSKADMESRVKWTKTVR 280
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 28/248 (11%), Positives = 70/248 (28%), Gaps = 57/248 (22%)
Query: 99 QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSD 158
+ + N ++ + I A ++ + +I+ ++ + F
Sbjct: 78 GENGYATNPEVKDLVYEGIELAFEHDMYVIV----DWHVHAPGDPRADVYSGAYDFFEEI 133
Query: 159 DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRT--- 215
D +++ + WEL NEP ++
Sbjct: 134 ADHYKD--------------------------HPKNHYIIWELANEPSPNNNGGPGLTND 167
Query: 216 ------IQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269
++ + + ++ N +L + Q P+L A N+
Sbjct: 168 EKGWEAVKEYAEPIVEMLREKGDNMILVGN--PNWSQ--------RPDLSADNPIDAENI 217
Query: 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRK--PILLAEFGKSRK 327
+ +VH Y +S+ ++ + + + L + E+G S+
Sbjct: 218 M-----YSVHFYTG-SHGASHIGYPEGTPSSERSNVMANVRYALDNGVAVFATEWGTSQA 271
Query: 328 DPGYSTYQ 335
+ Y
Sbjct: 272 NGDGGPYF 279
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 1e-04
Identities = 32/262 (12%), Positives = 74/262 (28%), Gaps = 53/262 (20%)
Query: 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161
+ N + V+ A G+ +I+++ + G W +
Sbjct: 101 NYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD----GYNSVQGGWL---------LVNG 147
Query: 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR--CTSDPSGRTIQAW 219
+K YK + + + + + + + +E MNE +P+
Sbjct: 148 GNQTAIKEKYKKVWQQIATK--------FSNYNDRLIFESMNEVFDGNYGNPNSAYYTNL 199
Query: 220 ITEMASYVKSI------DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGI 273
+V ++ + L T N + TD ++ IP
Sbjct: 200 NAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTV----GNYGFTLPTDNYRSSAIPSS 255
Query: 274 D---FATVHSYPDQWLSSSNDRDQLSFL--------------NNWLDTHIQDAEHILRK- 315
+ H Y + + + + ++L++ +
Sbjct: 256 QKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQFKSMYDKFVTQ 315
Query: 316 --PILLAEFGKSRKDPGYSTYQ 335
P+++ EFG K S+
Sbjct: 316 GYPVVIGEFGSIDKTSYDSSNN 337
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 33/289 (11%), Positives = 79/289 (27%), Gaps = 67/289 (23%)
Query: 74 FHEAASHGLTVAR---TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS 130
++ G R TW + ++ K ++ + A + +I++
Sbjct: 48 INKIKEAGFNTLRLPVTWD-----GHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIIN 102
Query: 131 LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190
L + + + VK + + N +
Sbjct: 103 LHHENEWLK-------------------PFYANEAQVKAQLTKVWTQIANNF-------- 135
Query: 191 KDDPTIMAWELMNEPRCTSDP---------SGRTIQAWITEMASYVKSIDRN---HLLEA 238
K + +E MNEPR + + + + +++ N +
Sbjct: 136 KKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMV 195
Query: 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
ST V PN D + +I ++H Y + + +
Sbjct: 196 PTLAASAMSTTINDLVIPNND-------SKVI-----VSLHMYSPYFFAMDINGTSSWGS 243
Query: 299 NNWLDTHIQDAEHILRK------PILLAEFGKSRKDPGYS--TYQRDVM 339
+ + + + + K +++ E G K+ + T+
Sbjct: 244 DYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTAARVTHAEYYA 292
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Length = 503 | Back alignment and structure |
|---|
Score = 41.9 bits (97), Expect = 4e-04
Identities = 42/302 (13%), Positives = 82/302 (27%), Gaps = 37/302 (12%)
Query: 88 WAFSD--GGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145
SD G YR ++ F +D ++ I+ +
Sbjct: 55 GLLSDDVGIYREVEIDGEMKPFYNFTYIDRIVDSYLALNIRPFIEFGFM----------P 104
Query: 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEP 205
S Q + P +++LI V++ + + ++ +E+ NEP
Sbjct: 105 KALASGDQTVFYWKGNVTPPKDYNKWRDLIVAVVSHF---IERYGIEEVRTWLFEVWNEP 161
Query: 206 RCTSDPSGRTIQAWITEMASYVKSIDR-NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264
+ Q + +++ + L+ G G S + + F
Sbjct: 162 NLVNFWKDANKQEYFKLYEVTARAVKSVDPHLQVGGPAICGGS-------DEWITDFLHF 214
Query: 265 VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQ--------DAEHILRKP 316
A +P +DF + H+Y + L D Q P
Sbjct: 215 CAERRVP-VDFVSRHAYTSKAPHKKTFEYYYQELEPPEDMLEQFKTVRALIRQSPFPHLP 273
Query: 317 ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376
+ + E+ S D N Y I GG + ++ +
Sbjct: 274 LHITEYNTS---YSPINPVHDTALNAAY--IARILSEGGDYVDSFSYWTFSDVFEEMDVP 328
Query: 377 YE 378
Sbjct: 329 KA 330
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 31/179 (17%), Positives = 54/179 (30%), Gaps = 18/179 (10%)
Query: 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
GL+ R F+ + L+ PG + LD IA G+K++L
Sbjct: 20 ARRMREAGLSHVRIGEFA---WALLEPEPGRLE---WGWLDEAIATLAAEGLKVVLGTPT 73
Query: 134 NYDSFGGKKQY--VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191
+Y + +G+ Y + R T Y
Sbjct: 74 ATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYRE-----EARRIVTLLAERYG 128
Query: 192 DDPTIMAWELMNEPRC---TSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQS 247
+ ++ NE C R +A+ + + +I+ L EA F+ Q
Sbjct: 129 GLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEA--LNEAWGTAFWSQR 185
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Length = 500 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 4e-04
Identities = 42/309 (13%), Positives = 82/309 (26%), Gaps = 36/309 (11%)
Query: 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
H + + R YN F +D + + GI+ + +
Sbjct: 53 GHGLLCDDVGIYREDV-------VGDEVKPFYN---FTYIDRIFDSFLEIGIRPFVEIGF 102
Query: 134 NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193
S Q + + P + +L+K VL+ + + GI
Sbjct: 103 M----------PKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLK 152
Query: 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253
W NEP + + K+I + + G
Sbjct: 153 WPFEIW---NEPNLKEFWKDADEKEYFKLYKVTAKAI-KEVNENLKVGGPAICGG----- 203
Query: 254 VNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDR--DQLSFLNNWLDTHIQDAEH 311
+ ++ +F +P +DF + H+Y + + ++ L+ E
Sbjct: 204 ADYWIEDFLNFCYEENVP-VDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFKTVREI 262
Query: 312 ILRKPILLAEFGKSRKDPGY--STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369
I F + + Y D FN Y I GG + ++
Sbjct: 263 IKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAY--IARILSEGGDYVDSFSYWTFSDV 320
Query: 370 MDAFRDGYE 378
+
Sbjct: 321 FEERDVPRS 329
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 8e-04
Identities = 63/398 (15%), Positives = 114/398 (28%), Gaps = 130/398 (32%)
Query: 55 Y-WLM-YVASDPSQRSKVSTAFHEAASHGLTVARTW----AFSDGGYRPLQRSPGSYNEQ 108
Y +LM + ++ Q S ++ + E R + F+ + R Q
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIE------QRDRLYNDNQVFAK---YNVSR------LQ 135
Query: 109 MFKGLDFVIAEARK------YGIK------LILSLANNYD---SFGGKKQYVNWARSQGQ 153
+ L + E R G+ + L + +Y K + W +
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK---IFWL-NLKN 191
Query: 154 FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSG 213
+ + +++ + Y+ DP + +S+
Sbjct: 192 CNSPET--------------VLEMLQKLL-------YQIDP-----NWTSRSDHSSNIKL 225
Query: 214 RT--IQAWITEM---ASYVKSI-------DRNHLLEAGLEGFYGQS----TPQRKRVNPN 257
R IQA + + Y + + F T + K+V
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW-----NAFNLSCKILLTTRFKQV--- 277
Query: 258 LDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQD--AEHILRK 315
TDF++ T H D + + S L +LD QD E +
Sbjct: 278 ----TDFLSAA-------TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 316 PILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSSAK-------RGGAAAGGLFWQLLT 367
P L+ +S +D + V + + I SS R +F +L
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR------KMFDRLSV 380
Query: 368 EGMDAFRDGYEI---VLS-----QSPSTANVITQQAHK 397
F I +LS S V+ + HK
Sbjct: 381 -----FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 8e-04
Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 22/148 (14%)
Query: 302 LDTHIQDAEHILRK--PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAG 359
+D + ++ + + F + + ++ I S +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV-SGTL 65
Query: 360 GLFWQLLTEGM--------DAFRDGYEIVLSQ------SPSTANVI-TQQAHKLYQIRKI 404
LFW LL++ + R Y+ ++S PS + +Q +LY ++
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 405 FARMRNVERRKRSRGMRR---RQRQGGN 429
FA+ NV R + +R+ R N
Sbjct: 126 FAK-YNVSRLQPYLKLRQALLELRPAKN 152
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 436 | |||
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 100.0 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 100.0 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 100.0 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 100.0 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 100.0 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 100.0 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 99.98 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.98 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 99.97 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.97 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 99.97 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.97 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 99.97 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 99.96 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 99.96 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 99.96 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 99.96 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 99.96 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.96 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 99.96 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.95 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 99.95 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 99.95 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.94 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 99.94 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.94 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.94 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 99.94 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 99.94 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.94 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 99.94 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 99.92 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 99.92 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 99.92 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 99.91 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.9 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.89 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.88 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.88 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.88 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.88 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.88 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.87 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.87 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.87 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.87 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.87 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.87 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.86 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.85 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.85 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.84 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.84 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.83 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.83 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.83 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.82 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 99.82 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.81 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 99.81 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 99.81 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 99.8 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 99.8 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.8 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.8 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 99.8 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 99.8 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 99.8 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 99.8 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 99.79 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 99.79 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 99.79 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.78 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.78 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 99.78 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 99.78 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.78 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 99.77 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.77 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 99.77 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.76 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.76 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 99.76 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.76 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.74 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.69 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.69 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.67 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.65 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.65 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.64 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.62 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.62 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 99.58 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 99.56 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.56 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 99.56 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 99.55 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 99.55 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 99.55 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.54 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.54 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.52 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.5 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 99.47 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 99.46 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 99.43 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 99.41 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 99.36 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 99.29 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 99.29 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.08 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 99.03 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 99.01 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.93 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.89 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.86 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.64 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.56 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 98.53 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 98.53 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 98.51 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.49 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.47 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 98.35 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 98.33 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 98.32 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 98.19 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 98.09 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 98.08 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 98.06 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 97.99 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.98 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 97.98 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 97.82 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 97.76 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 97.7 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 97.65 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 97.59 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 97.55 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 97.1 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.92 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 96.69 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 96.61 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 96.61 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 96.59 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 96.58 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 96.42 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 96.27 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 96.24 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 96.17 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 96.05 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 96.03 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 95.84 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 95.72 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 95.64 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 95.53 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 95.5 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 95.49 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 95.27 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 95.22 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 95.0 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 94.98 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 94.78 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 94.69 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 94.54 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 94.53 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 94.09 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 94.0 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 93.77 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 93.28 | |
| 1yht_A | 367 | DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact | 93.26 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 93.18 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 93.09 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 93.02 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 92.86 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 92.62 | |
| 1jak_A | 512 | Beta-N-acetylhexosaminidase; glycoside hydrolase, | 92.36 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 92.32 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 92.27 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 92.26 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 92.19 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 92.18 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 92.17 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 92.01 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 92.01 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 91.8 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 91.8 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 91.7 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 91.7 | |
| 3gza_A | 443 | Putative alpha-L-fucosidase; NP_812709.1, structur | 91.64 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 91.59 | |
| 3cbw_A | 353 | YDHT protein; structural genomics, unknown functio | 91.53 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 91.51 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 91.42 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 91.4 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 91.35 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 91.29 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 91.23 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 91.11 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 91.0 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 90.87 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 90.66 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 90.57 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 90.54 | |
| 3gh5_A | 525 | HEX1, beta-hexosaminidase; beta-N-acetylhexosamini | 89.9 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 89.81 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 89.52 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 89.24 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 89.13 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 89.07 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 88.69 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 88.46 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 88.42 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 87.9 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 87.73 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 87.67 | |
| 1gqi_A | 708 | Alpha-glucuronidase; (alpha-beta)8 barrel, glycosi | 87.13 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 86.62 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 86.58 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 86.45 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 86.32 | |
| 1l8n_A | 679 | Alpha-D-glucuronidase; hydrolase; HET: GCW XYP; 1. | 86.23 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 86.1 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 85.94 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 85.67 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 85.6 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 85.29 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 85.19 | |
| 2v5d_A | 737 | O-GLCNACASE NAGJ; family 32 carbohydrate binding m | 84.43 | |
| 2v5c_A | 594 | O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol | 83.53 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 83.35 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 82.81 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 81.2 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 81.19 |
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-65 Score=509.45 Aligned_cols=341 Identities=34% Similarity=0.660 Sum_probs=283.3
Q ss_pred EeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCC------CCCCccCCCCCC-
Q 013811 34 RTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGG------YRPLQRSPGSYN- 106 (436)
Q Consensus 34 ~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~------~~~lq~~pg~~~- 106 (436)
-++|++|++|||||+|.|+|.||+++. +++.++++|+.||++|+|+||+|+|+++. |+.+|+.||.|+
T Consensus 14 ~~~g~~F~ldGkp~~f~G~N~y~~~~~-----~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~ 88 (383)
T 3pzg_A 14 LVPRGSHMLNGKEFRFIGSNNYYMHYK-----SNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGV 88 (383)
T ss_dssp -------------CCEEEEECSCTTTS-----CHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSS
T ss_pred cccCCEEEECCEEEEEEEEEecccccC-----CHHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccc
Confidence 478999999999999999999999763 34789999999999999999999998764 567899999999
Q ss_pred -------hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 013811 107 -------EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVL 179 (436)
Q Consensus 107 -------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv 179 (436)
++.|+.||++|++|+++||+|||+|++.|+.+||++.|+.|... .....||++|.+++.++++++.|+
T Consensus 89 ~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~g~-----~~~~~f~~dp~~~~~~~~~~~~l~ 163 (383)
T 3pzg_A 89 PEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGG-----THHDDFYRDERIKEEYKKYVSFLI 163 (383)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHTTC-----CSTTHHHHCHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCccchhhhcCC-----CccccccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998631 134679999999999999999999
Q ss_pred hccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCcc-ccCCCCC
Q 013811 180 NRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQR-KRVNPNL 258 (436)
Q Consensus 180 ~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~-~~~np~~ 258 (436)
+|+|||||++|+++|+|++|+|+|||.+..+.+++.+.+|+++|+++||++||+|||++|++|+++.+.+.. ...++.|
T Consensus 164 ~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~ 243 (383)
T 3pzg_A 164 NHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEW 243 (383)
T ss_dssp TCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGG
T ss_pred hhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEEEcccccccccccccccCCCCcc
Confidence 999999999999999999999999999986655688999999999999999999999999999987544310 0001112
Q ss_pred ----cccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChH
Q 013811 259 ----DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTY 334 (436)
Q Consensus 259 ----~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~ 334 (436)
..|.||.+++..+.|||+|+|.||++|.. +.+..+++..+||++|++.|++ ++|||+|+|||.+.. +.+
T Consensus 244 ~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~w~~--~~~~~~~~~~~wi~~h~~~a~~-~gKPvv~eEfG~~~~----~~~ 316 (383)
T 3pzg_A 244 AYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGV--SPENYAQWGAKWIEDHIKIAKE-IGKPVVLEEYGIPKS----APV 316 (383)
T ss_dssp GTBTTTSCCHHHHHTCTTCCSEEEEECHHHHTC--CGGGHHHHHHHHHHHHHHHHHH-HTCCEEEEEECCCTT----SSS
T ss_pred ccccccCCChHhhcCCCCCCEEEEEecccccCc--ChHHHHHHHHHHHHHHHHHHHh-cCCCEEEEecCCCCC----Chh
Confidence 36889999999999999999999999973 3455678999999999999997 999999999999865 245
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCC---------CCCCceEEeCCCcCHHHHHHHHHHH
Q 013811 335 QRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDA---------FRDGYEIVLSQSPSTANVITQQAHK 397 (436)
Q Consensus 335 ~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~---------~~dg~~i~~~~d~~~~~li~~~~~~ 397 (436)
.|+++++.+++.++++ ..+|++||||.+.+.+. -.|||+|+.+ ++++.+||.+|+++
T Consensus 317 ~r~~~~~~~~~~~~~~-----~~~g~~~Wq~~~~~~g~~~~~~~~~~~~dg~~i~~~-~~~~~~~~~~~~~~ 382 (383)
T 3pzg_A 317 NRTAIYRLWNDLVYDL-----GGDGAMFWMLAGIGEGSDRDERGYYPDYDGFRIVND-DSPEAELIREYAKL 382 (383)
T ss_dssp CHHHHHHHHHHHHHHT-----TCCEEEESCBCCBCBTTBCCTTSBCCCSSSCCBCSS-SSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh-----CCcceEEEEecCcCCCCcCCCCCcccCCCCeEEEeC-CccHHHHHHHHHhh
Confidence 7999999999998875 46899999999874311 1379998886 78999999999864
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-64 Score=502.64 Aligned_cols=369 Identities=58% Similarity=1.067 Sum_probs=318.8
Q ss_pred CCCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChh
Q 013811 29 GDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQ 108 (436)
Q Consensus 29 ~~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~ 108 (436)
..|||+|+|++|++||||++++|+|.||+...+.++.+++.++++|+.||++|+|+||+|+++++.|..+|+.||.|+++
T Consensus 3 ~~g~v~v~g~~~~~nG~p~~~~G~n~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~ 82 (373)
T 1rh9_A 3 NNNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQ 82 (373)
T ss_dssp -CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHH
T ss_pred CCCcEEEeCCEEEECCEEEEEEEEccccccccccCCccHHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHH
Confidence 45899999999999999999999999998765444446789999999999999999999998887788899999999999
Q ss_pred hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 109 MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 109 ~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
.|+.||++|++|+++||+||++||+.|.++||.+.|+.|....|........||+++..++.++++++.|++|+|+|||+
T Consensus 83 ~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~ 162 (373)
T 1rh9_A 83 MFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKV 162 (373)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHhhcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCc
Confidence 99999999999999999999999999988999999999997766544445679999999999999999999999999999
Q ss_pred ccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCC-Ccccchhhhh
Q 013811 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN-LDIGTDFVAN 267 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~-~~~g~df~~~ 267 (436)
+|+++|+|++|+|+|||.+..+++++.+.+|+++++++||++||+|+|++|.+++++...+ ..||. |..+.|+...
T Consensus 163 ~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~g~~~~~~~---~~~~~~~~~~~d~~~~ 239 (373)
T 1rh9_A 163 AYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMR---QYNPNSYIFGTNFISN 239 (373)
T ss_dssp BGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGG---GGSGGGCCCSCCHHHH
T ss_pred cccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhhCCCceEEeCcccccCCCCC---cCCccccccccchhhh
Confidence 9999999999999999998765456789999999999999999999999998887654321 11332 3345566655
Q ss_pred cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 013811 268 NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 268 ~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i 347 (436)
...+.+||+++|.|+..|.+..+.+....+..+|+..+++.+++ .+||++|+|||......+++++.|+.|++.+++.+
T Consensus 240 ~~~~~~D~~s~H~Y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~ 318 (373)
T 1rh9_A 240 NQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKM-LKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTI 318 (373)
T ss_dssp HTSTTCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHH-HTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHH
T ss_pred ccCCCcCeEEEeeCCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 66788999999999987765444455566778889888877665 79999999999987666678889999999999998
Q ss_pred HHHhhcCCCccceeecccccCCCCCCCCCceEEeCCCcCHHHHHHHHHHHHHhh
Q 013811 348 YSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQI 401 (436)
Q Consensus 348 ~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~~~d~~~~~li~~~~~~~~~~ 401 (436)
+++++++..+.|+++|+|.+++++.|.|||+|++.++++|.++|++|+++|+.|
T Consensus 319 ~~~~~~~~~~~G~~~W~~~~~~~~~~~d~f~i~~~~~~~~~~~~~~~~~~~~~~ 372 (373)
T 1rh9_A 319 FNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKL 372 (373)
T ss_dssp HHHHHTTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTC
T ss_pred HHHhhcCCCceeEeeeecCCCCCCCCCCCcEEEcCCChhHHHHHHHHHHHhhcc
Confidence 888877667899999999999887788999999998899999999999999876
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=467.41 Aligned_cols=361 Identities=26% Similarity=0.492 Sum_probs=295.4
Q ss_pred CCCCCEEeeCCeEEECCeEEEEEeecccccccccCCc--chhhhHHHHHHHHHHCCCCEEEEccccCC-------CCCCC
Q 013811 28 AGDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDP--SQRSKVSTAFHEAASHGLTVARTWAFSDG-------GYRPL 98 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~--~~~~~~~~~l~~l~~~G~N~vRi~~~~d~-------~~~~l 98 (436)
+..|||+++|++|++||||++++|+|+||.......+ .+++.++++|+.||++|+|+||++ +.++ -|+.+
T Consensus 20 ~~~gfv~v~g~~f~~nG~p~~~~G~N~~~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~ 98 (440)
T 1uuq_A 20 AHEHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAV 98 (440)
T ss_dssp --CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCS
T ss_pred CCCCCEEeeCCEEEECCeEEEEEeEccCchhhhccCcccCCHHHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccc
Confidence 4568999999999999999999999988877653222 367899999999999999999998 4332 15678
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCC-----------CCCCCCChHH
Q 013811 99 QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTS-----------DDDFFRNPVV 167 (436)
Q Consensus 99 q~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~-----------~~~f~~~~~~ 167 (436)
++.||.|+++.|+.||++|++|+++||+|||+|+++|..+||+++|+.|....+.+++. ...||+++..
T Consensus 99 ~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 178 (440)
T 1uuq_A 99 TNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKA 178 (440)
T ss_dssp BSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchhhHHHhccCCCCCCcccccccchhhhhhhhccCHHH
Confidence 99999999999999999999999999999999999999999999999998543221111 1468999999
Q ss_pred HHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcc
Q 013811 168 KGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTIQAWITEMASYVKSIDRNHLLEAGLEGF 243 (436)
Q Consensus 168 ~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~ 243 (436)
++.++++++.|++|+|+|||++||++|+|++|+|+|||.+..+. +.+.+.+|+++|+++||++||+|||++|.+|+
T Consensus 179 ~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~ 258 (440)
T 1uuq_A 179 QQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGE 258 (440)
T ss_dssp HHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSG
T ss_pred HHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcccccchHHHHHHHHHHHHHHHhhCCCCeEEECCccc
Confidence 99999999999999999999999999999999999999986421 34678999999999999999999999999887
Q ss_pred cCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCC--hh----HhHHHHHHHHHHHHHHHHHhcCCcE
Q 013811 244 YGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSN--DR----DQLSFLNNWLDTHIQDAEHILRKPI 317 (436)
Q Consensus 244 ~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~--~~----~~~~~~~~~i~~~~~~a~~~~~kPv 317 (436)
++...+ ..+|......+.+||+++|.|+..|.+... .. ....+..+|+..+++.+++ .+|||
T Consensus 259 ~~~~~~-----------~~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~kPv 326 (440)
T 1uuq_A 259 MGSVND-----------MQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQ-LNKPL 326 (440)
T ss_dssp GGTTTC-----------HHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HTCCE
T ss_pred cCCCCc-----------chhhHHhccCCCCCEEEEEeCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHH-hCCCE
Confidence 654321 124555667789999999999988764321 11 2235678888888887775 89999
Q ss_pred EEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCC-----------CC-CC------
Q 013811 318 LLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD-----------AF-RD------ 375 (436)
Q Consensus 318 ~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~-----------~~-~d------ 375 (436)
+|+|||..... ++.+++.+++|++.+++.+.+++++++.++|+++|+|.|.+.. ++ +|
T Consensus 327 il~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~d~~~~~~~~~~~~~g~d~~~d~~~~~~ 406 (440)
T 1uuq_A 327 VLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQ 406 (440)
T ss_dssp EEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCT
T ss_pred EEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEeeecCCCCcccccccccCCccccCCcccccC
Confidence 99999998652 2457789999999999988887776667899999999875432 11 22
Q ss_pred CceEEeCCCcCHHHHHHHHHHHHHhh
Q 013811 376 GYEIVLSQSPSTANVITQQAHKLYQI 401 (436)
Q Consensus 376 g~~i~~~~d~~~~~li~~~~~~~~~~ 401 (436)
|+.+++.+++++.++|++++++|+.+
T Consensus 407 G~~~~~~~~~~~~~~i~~~~~~~~~~ 432 (440)
T 1uuq_A 407 GMYGVFDTDTSTIAIMKEFNARFQPK 432 (440)
T ss_dssp TSSCEETTCHHHHHHHHHHHHHHCC-
T ss_pred CcccccCCChHHHHHHHHHHHhcCcc
Confidence 88899999999999999999999875
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=397.12 Aligned_cols=343 Identities=30% Similarity=0.560 Sum_probs=264.8
Q ss_pred CCCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--------
Q 013811 29 GDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-------- 100 (436)
Q Consensus 29 ~~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-------- 100 (436)
..|||+|+|++|++||||++++|+|.||++.. ++++++++|+.||++|+|+||+|++.++.......
T Consensus 3 p~GFv~~~g~~f~~nG~~~~~~G~N~~~~~~~-----~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~ 77 (387)
T 4awe_A 3 PKGFVTTEGDHFKLDGKDFYFAGSNAYYFPFN-----DQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNE 77 (387)
T ss_dssp --CCCEEETTEEEETTEECCEEEEECTTGGGS-----CHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCC
T ss_pred CCcCEEEECCEEEECCEEEEEEEEccCcCCCC-----CHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhcc
Confidence 36899999999999999999999999998753 35789999999999999999999876542211100
Q ss_pred -------------CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHH
Q 013811 101 -------------SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVV 167 (436)
Q Consensus 101 -------------~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~ 167 (436)
.+..+++..++.+|+++++|+++||+|++++++.|..++|.+.|..|... .....||+++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~ 152 (387)
T 4awe_A 78 GAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIVALTNNWADYGGMDVYTVNLGG-----KYHDDFYTVPKI 152 (387)
T ss_dssp TTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEEECCBSSSTTCCHHHHHHHTTC-----CSTTHHHHCHHH
T ss_pred ccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEEeecccccccCCCccccccccc-----ccccccccCHHH
Confidence 12234456788999999999999999999999999999999988877532 234688999999
Q ss_pred HHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----------ChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 168 KGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----------SGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 168 ~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----------~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
++.++++++.+++| ||++|+|++|+|+|||.+.... ..+.+..|+++++++||++||+|||
T Consensus 153 ~~~~~~~~~~~~~r--------~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp~~lv 224 (387)
T 4awe_A 153 KEAFKRYVKAMVTR--------YRDSEAILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDGNHLV 224 (387)
T ss_dssp HHHHHHHHHHHHHH--------HTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHhh--------cCCCcceeEeccCCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCCCCcE
Confidence 99999999999999 9999999999999999986532 3568899999999999999999999
Q ss_pred EeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCc
Q 013811 237 EAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKP 316 (436)
Q Consensus 237 ~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kP 316 (436)
++|.++++....+....... .....++......+.+|++++|.||+.|... ..+...|+..+...+.. .+||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~y~~~~~~~------~~~~~~~~~~~~~~~~~-~~kp 296 (387)
T 4awe_A 225 TWGGEGGFNRGEDEEDGFYN-GADGGDFDRELGLRNVDFGTMHLYPDWWSKS------IEWSNQWIHDHAASGRA-ANKP 296 (387)
T ss_dssp ECCCCCCCBCCC--CCTTTB-TTTSCCHHHHHTCTTCCCEEEEECHHHHTCC------HHHHHHHHHHHHHHHHH-HTCC
T ss_pred EEcccccccCCCcccccccc-ccccccchhcccCCccceeeecccccccchh------hhhhHHHHHHHHHHHHh-cCCC
Confidence 99998876654332110000 1223345566778999999999999766432 34566777777777776 8999
Q ss_pred EEEEecCCCCCC------CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCC---CCCCCCceEEeCCCcCH
Q 013811 317 ILLAEFGKSRKD------PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM---DAFRDGYEIVLSQSPST 387 (436)
Q Consensus 317 v~i~EfG~~~~~------~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~---~~~~dg~~i~~~~d~~~ 387 (436)
++++|||..... .....+.+..++..+...... ..++|+++|+|.+++. ..+.|||+|+.. |+++
T Consensus 297 ~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~G~~~W~~~~~~~~~~~~~~dg~~i~~~-d~~~ 370 (387)
T 4awe_A 297 VVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQKIAIQ-----EKLAGDMYWQFGYGGYSYGRNHDDSFTIYLE-DDEA 370 (387)
T ss_dssp EEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHHHHHH-----HTCSEEEESCEECSCBTTBSCCCCSCCEETT-STTH
T ss_pred eeeccccccccCCCccchhhhhHHHHHHHHHHHHHHHhC-----CCCeEEEEEEEcCCCCCCCCccCCCCEEECC-CCCH
Confidence 999999987642 112233455555555443333 2678999999998764 245689999876 6679
Q ss_pred HHHHHHHHHHHHhhhh
Q 013811 388 ANVITQQAHKLYQIRK 403 (436)
Q Consensus 388 ~~li~~~~~~~~~~~~ 403 (436)
..+|++|+++|++|+.
T Consensus 371 ~~~i~~~a~~~~~l~~ 386 (387)
T 4awe_A 371 KELVYKHAKKVQKLNE 386 (387)
T ss_dssp HHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999964
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=383.74 Aligned_cols=327 Identities=29% Similarity=0.581 Sum_probs=255.2
Q ss_pred CCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCC-C-----CCccCCC
Q 013811 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGY-R-----PLQRSPG 103 (436)
Q Consensus 30 ~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-~-----~lq~~pg 103 (436)
.+||+|+|++|++||+|++++|+|.||+.... +++.++++|+.||++|+|+||+|++.++.+ | .+|+.|+
T Consensus 2 ~~~v~~~g~~~~~nG~~~~~~G~n~~~~~~~~----~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~ 77 (344)
T 1qnr_A 2 SSFVTISGTQFNIDGKVGYFAGTNCYWCSFLT----NHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSA 77 (344)
T ss_dssp CCCCEEETTEEEETTEESCEEEEECGGGGGCC----CHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCT
T ss_pred CCcEEEECCEEEECCEEEEEEEEecccccccC----CHHHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCC
Confidence 57999999999999999999999999987642 458899999999999999999987754211 1 2455554
Q ss_pred ---CCC--hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 104 ---SYN--EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTV 178 (436)
Q Consensus 104 ---~~~--~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~i 178 (436)
.|+ ++.|+.||++|++|+++||+||+++|+.|.++||.+.|..|... ....+|+++..++.++++++.|
T Consensus 78 ~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~ 151 (344)
T 1qnr_A 78 TGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGG------NATTWYTNTAAQTQYRKYVQAV 151 (344)
T ss_dssp TCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCS------CTTGGGGCHHHHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccCCHHHHHHHhCC------ChhhhcCCHHHHHHHHHHHHHH
Confidence 355 88899999999999999999999999999888999889888632 2467899999999999999999
Q ss_pred HhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcc-cCCCCCccccCCCC
Q 013811 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGF-YGQSTPQRKRVNPN 257 (436)
Q Consensus 179 v~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~-~~~~~~~~~~~np~ 257 (436)
++| |+++|+|++|+|+|||.+..+ +.+.+.+|+++++++||++||+++|++|.+++ ++.+.. .+|.
T Consensus 152 ~~r--------~~~~p~v~~w~l~NEp~~~~~-~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~~~~~~~~~~----~~~~ 218 (344)
T 1qnr_A 152 VSR--------YANSTAIFAWELGNEPRCNGC-STDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDG----AYPY 218 (344)
T ss_dssp HHH--------HTTCTTEEEEESCBSCCCTTC-CTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCC----CGGG
T ss_pred HHH--------hCCCCcEEEEEcccCcccCCC-ChHHHHHHHHHHHHHHHhcCCCCEEEECCccccCCCCCc----cCCc
Confidence 999 999999999999999998532 35779999999999999999999999998775 222111 1120
Q ss_pred -CcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHH
Q 013811 258 -LDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQR 336 (436)
Q Consensus 258 -~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r 336 (436)
...|.||......+.+||+++|.||..|.... .+..+|+..+++.+++ .+|||+|+|||..... . ...
T Consensus 219 ~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~~~~~------~~~~~~~~~~~~~~~~-~~kPv~l~E~G~~~~~---~-~~~ 287 (344)
T 1qnr_A 219 TYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNY------TWGNGWIQTHAAACLA-AGKPCVFEEYGAQQNP---C-TNE 287 (344)
T ss_dssp SSSSSCCHHHHHTCTTCCSEEEEECHHHHTCCS------THHHHHHHHHHHHHHH-TTSCEEEEEECCSSCH---H-HHH
T ss_pred cccccCcHHHHhCCCCCCeEEeeeCCCccCccc------hHHHHHHHHHHHHHHH-cCCCEEEeecCCCCCC---C-chH
Confidence 11345666666778999999999998776432 2456778888777665 7999999999987642 1 111
Q ss_pred HHHHHHHHHHHHHHhhcCCCccceeecccccC---CCCCCCCCceEEeCCCcCHHHHHHHHHHHHH
Q 013811 337 DVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE---GMDAFRDGYEIVLSQSPSTANVITQQAHKLY 399 (436)
Q Consensus 337 ~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~---g~~~~~dg~~i~~~~d~~~~~li~~~~~~~~ 399 (436)
..+ +..+. +..++.|+++|+|.+. +.....+||+|+.. |.++.+||++|+++|+
T Consensus 288 ~~~----~~~~~----~~~~~~g~~~W~~~d~~~~g~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~ 344 (344)
T 1qnr_A 288 APW----QTTSL----TTRGMGGDMFWQWGDTFANGAQSNSDPYTVWYN-SSNWQCLVKNHVDAIN 344 (344)
T ss_dssp HHH----HHHHH----TSTTEEEEEESCEECBCTTSCBCCCCTTCEETT-SHHHHHHTHHHHHHHC
T ss_pred HHH----HHHHH----hcCCCCceEEEeccCCCCCCCccCCCCcEEEeC-CccHHHHHHHHHHhcC
Confidence 222 22221 2235789999999884 22346689999987 4567799999999974
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=314.64 Aligned_cols=291 Identities=22% Similarity=0.315 Sum_probs=204.2
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCC-----cchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-----CC
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASD-----PSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-----SP 102 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~-----~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-----~p 102 (436)
|+|+|++|++||||++++|+|++|....... ..+++.++++|+.||++|+|+||+|++.++...+... .+
T Consensus 2 v~v~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~ 81 (351)
T 3vup_A 2 LHIQNGHFVLNGQRVFLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTG 81 (351)
T ss_dssp CEEETTEEEETTEEBCEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEE
T ss_pred EEEECCEEEECCEEEEEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCccccccccccc
Confidence 7999999999999999999999887643211 1356889999999999999999999987653321111 12
Q ss_pred CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcc
Q 013811 103 GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRY 182 (436)
Q Consensus 103 g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~ 182 (436)
..++++.++.+|+++++|+++||+||++||+.+...++...+..+ +++++..++.+.++++.+|+|
T Consensus 82 ~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~r- 147 (351)
T 3vup_A 82 PDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNRLDGL-------------IKDQHKLQSYIDKALKPIVNH- 147 (351)
T ss_dssp SCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGHHHHH-------------HHCHHHHHHHHHHTHHHHHHH-
T ss_pred ccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCccccc-------------cCCcHHHHHHHHHHHHHHHHH-
Confidence 345678999999999999999999999999887655544333222 234456677889999999999
Q ss_pred ccccccccCCCCcEEEEEeecCCCCCCCC--------------------------ChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 183 NTFTGIHYKDDPTIMAWELMNEPRCTSDP--------------------------SGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 183 n~~tg~~yk~~p~I~~weL~NEp~~~~~~--------------------------~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
||+||+|++|+|+|||.+.... ..+.+.+|+++|+++||++||+|||
T Consensus 148 -------~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~dp~~lv 220 (351)
T 3vup_A 148 -------VKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDILRFLNWQADAIKTTDPGALV 220 (351)
T ss_dssp -------TTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred -------hcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhhHHHHHHHHHHHhhccCCCCee
Confidence 9999999999999999754221 2367899999999999999999999
Q ss_pred EeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCc
Q 013811 237 EAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKP 316 (436)
Q Consensus 237 ~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kP 316 (436)
++|.++++........ .+.......++......+.+|++++|.|+.......... +...+ ... ..+||
T Consensus 221 ~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~~~~~~~----~~~~~------~~~-~~~kP 288 (351)
T 3vup_A 221 TMGVWNPKSNTDHFNM-NNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGKWDEVAP----FTHQA------SDY-GLHKP 288 (351)
T ss_dssp EEEESSGGGSCSSTTC-CCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTBCCTTCG----GGSCG------GGG-CCSSC
T ss_pred EecCcccccccCcccc-ccccccccccccccccccccceeeeeccCcccccchhhh----HHHHH------Hhc-CCCCc
Confidence 9998877554332110 000001122344455678899999999984332221110 00000 111 26899
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 317 ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 317 v~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
|+|+|||....... ...+++. .+++. +.+|+++|+|.+.+
T Consensus 289 vii~Efg~~~~~~~----~~~~~~~----~~~~~-----~~~G~~~W~~~d~~ 328 (351)
T 3vup_A 289 IVVGEFWEQDGGGM----TITQMFN----YVYNH-----GYAGAWSWHLVQRG 328 (351)
T ss_dssp EEEEECCGGGSTTC----CHHHHHH----HHHHT-----TCSEEEEECHHHHH
T ss_pred EEEEeCCCCCCCCc----CHHHHHH----HHHhc-----CCeEEEEEeeecCC
Confidence 99999997654321 1233333 33332 57899999999864
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=283.85 Aligned_cols=287 Identities=18% Similarity=0.326 Sum_probs=188.9
Q ss_pred CCCEEeeCCeEEECCeEEEEEeecccccccccC-C--cch--hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCC
Q 013811 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVAS-D--PSQ--RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGS 104 (436)
Q Consensus 30 ~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~-~--~~~--~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~ 104 (436)
.+||+|+|++|++||+|++++|+|++|..+... . ..+ .+.++++|+.||++|+|+||++++.++...+....+|.
T Consensus 2 ~~~v~v~g~~~~~nG~~~~~~GvN~~w~~~~~~~~~~~~~~~~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~ 81 (353)
T 2c0h_A 2 AVRLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGY 81 (353)
T ss_dssp CCCEEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSC
T ss_pred CceEEEeCCEEEECCeEEEEEEEEHHhhhccccccCCccccchHHHHHHHHHHHHcCCCEEEEceecCCccCccccCCCc
Confidence 479999999999999999999999988764311 1 112 67899999999999999999987754321111123442
Q ss_pred ---CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChH-HHHHHHHHHHHHHh
Q 013811 105 ---YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPV-VKGYYKNLIKTVLN 180 (436)
Q Consensus 105 ---~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~-~~~~~~~~v~~iv~ 180 (436)
.++..|+.+|++|+.|+++||+||++|++.|....|... + ..++.++. .++.+++.++.|++
T Consensus 82 ~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~~~~~~g~~~---~-----------~~~~~~~~~~~~~~~~~~~~~a~ 147 (353)
T 2c0h_A 82 VTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYR---L-----------NGLMVDTRKLQSYIDHALKPMAN 147 (353)
T ss_dssp EEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHH---H-----------HHHHHCHHHHHHHHHHTHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEccCccccCCCccc---c-----------cceEeCHHHHHHHHHHHHHHHHH
Confidence 345789999999999999999999999765532222111 0 12344554 44555688899999
Q ss_pred ccccccccccCCCCcEEEEEeecCCCCCCC--------------------------CChHHHHHHHHHHHHHhhccCCCC
Q 013811 181 RYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------------------------PSGRTIQAWITEMASYVKSIDRNH 234 (436)
Q Consensus 181 r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------------------------~~~~~~~~w~~~~~~~Ir~~Dp~~ 234 (436)
| ||++|+|++|+|+|||.+... ...+.+.+|+++++++||++||+|
T Consensus 148 r--------y~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~Ir~~dp~~ 219 (353)
T 2c0h_A 148 A--------LKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGA 219 (353)
T ss_dssp H--------HTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred H--------hCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHHHHHHHHHHHHHHhhCCCC
Confidence 9 999999999999999987510 012678999999999999999999
Q ss_pred EEEeCCCcccCCCCCccccCCCCCcccchhhh--hcCCCCcceEEeecCCCC--CCCCCChhHhHHHHHHHHHHHHHHHH
Q 013811 235 LLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA--NNLIPGIDFATVHSYPDQ--WLSSSNDRDQLSFLNNWLDTHIQDAE 310 (436)
Q Consensus 235 lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~--~~~~~~iD~~s~H~Y~~~--w~~~~~~~~~~~~~~~~i~~~~~~a~ 310 (436)
+|++|..+.+....... ..+. +. ...+.. ....+.+||+++|.|+.. |......... .. ..
T Consensus 220 ~V~~~~~~~~~~~~~~~-~~~~-~~-d~~l~~~~~~~~~~~D~~s~H~Y~~~~~~~~~~~~~~~-----------~~-~~ 284 (353)
T 2c0h_A 220 MVTVGSWNMKADTDAMG-FHNL-YS-DHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKHS-----------FS-NF 284 (353)
T ss_dssp CEEEEESCGGGBCSSTT-CCBT-TS-HHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTSSC-----------GG-GG
T ss_pred eEEECCccccCCCcccC-cCCC-Cc-chhhhhhccccCCCCCEEEEeeCCCcccccccCcccch-----------HH-Hh
Confidence 99998643221111000 0000 00 000000 123578999999999832 2111111000 00 00
Q ss_pred HhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 311 HILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 311 ~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
+ .+||++|+|||...... .++..+++.+.+ .+..|+++|+|.+
T Consensus 285 ~-~~~P~~i~E~G~~~~~~--------~~~~~~~~~~~~-----~g~~g~~~W~~~d 327 (353)
T 2c0h_A 285 R-LKKPMVIGEFNQEHGAG--------MSSESMFEWAYT-----KGYSGAWTWSRTD 327 (353)
T ss_dssp C-CSSCEEEEECCGGGSTT--------CCHHHHHHHHHH-----TTCSEEEESCSSS
T ss_pred c-CCCCEEEEecCCCCCCC--------ccHHHHHHHHHH-----CCCcEEEEEEEcC
Confidence 1 58999999999876321 123334443333 2468999999998
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=281.95 Aligned_cols=306 Identities=19% Similarity=0.240 Sum_probs=196.4
Q ss_pred CCCCEEeeCCeEEE-CCeEEEEEeecccccccccC--CcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCC
Q 013811 29 GDGFIRTRGSHFLL-NGNLYFANGFNAYWLMYVAS--DPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPG 103 (436)
Q Consensus 29 ~~~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~--~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg 103 (436)
+.+||+|+|++|+. ||+|++++|+|.+....... +......++++|+.||++|+|+||+++. |..+++ .|+
T Consensus 2 ~~~~l~v~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~~~----~~~~~~~~~~~ 77 (358)
T 1ece_A 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYS----DDILKPGTMPN 77 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEE----GGGGSTTCCCC
T ss_pred CCCCEEEcCCEEEcCCCCEEEEEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEeecc----HHHhcCCCCCc
Confidence 45799999999996 99999999999532211110 1111245799999999999999999754 222333 245
Q ss_pred CCChh----------hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHH
Q 013811 104 SYNEQ----------MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKN 173 (436)
Q Consensus 104 ~~~~~----------~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~ 173 (436)
.+++. .++.||++|++|.++||+|||++|+. ..++ ....|++++..++.+.+
T Consensus 78 ~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~~--~~~~----------------~~~~w~~~~~~~~~~~~ 139 (358)
T 1ece_A 78 SINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRP--DCSG----------------QSALWYTSSVSEATWIS 139 (358)
T ss_dssp SCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEES--BTTB----------------CCSSSCCSSSCHHHHHH
T ss_pred cccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCCC--CCCC----------------CCCCCcCCCccHHHHHH
Confidence 55543 89999999999999999999999962 1100 12356677778899999
Q ss_pred HHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCC
Q 013811 174 LIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTP 249 (436)
Q Consensus 174 ~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~ 249 (436)
+++.|++| |+++|+|++|+|+|||.+.... ....+..++++++++||+.||+|+|++++.++... .+
T Consensus 140 ~~~~ia~r--------~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~-~~ 210 (358)
T 1ece_A 140 DLQALAQR--------YKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNG-DS 210 (358)
T ss_dssp HHHHHHHH--------TTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETT-EE
T ss_pred HHHHHHHH--------hcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCC-CC
Confidence 99999999 9999999999999999976321 23567888999999999999999999976543100 00
Q ss_pred ccccCCCCCcccchhhhhcCCCCcceEEeecCCCC-----CCCCCChhHhHH--HHHHHHHHHHHHHHHhcCCcEEEEec
Q 013811 250 QRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQ-----WLSSSNDRDQLS--FLNNWLDTHIQDAEHILRKPILLAEF 322 (436)
Q Consensus 250 ~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~-----w~~~~~~~~~~~--~~~~~i~~~~~~a~~~~~kPv~i~Ef 322 (436)
.++..+ +....+..........+++++|.|+.. |......+..+. +...|. ..+.+ .++||+||||
T Consensus 211 ~~w~~~--~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~~~~~-~g~Pv~igEf 283 (358)
T 1ece_A 211 YWWGGN--LQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWG----YLFNQ-NIAPVWLGEF 283 (358)
T ss_dssp CSTTTB--CTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTH----HHHHT-TSSCEEEEEC
T ss_pred CccCCc--CCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHHHHHHHHHH----HHHhc-CCCCEEEecc
Confidence 000000 000000000011134569999999753 322212222111 112221 12233 6899999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCCceEEe
Q 013811 323 GKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVL 381 (436)
Q Consensus 323 G~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~ 381 (436)
|..... ..+..+++.+++.+.+.++......|+++|++.++. ++.++++.
T Consensus 284 G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~~----~d~~Gl~~ 333 (358)
T 1ece_A 284 GTTLQS-----TTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS----GDTGGILK 333 (358)
T ss_dssp CCCCCS-----HHHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSCC----TTTCCSBC
T ss_pred CCCCCC-----CccHHHHHHHHHHHHHhhhcccCCceeeEEcccCCC----CCCCceec
Confidence 997642 234566666655432211111134699999998753 24455554
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=266.24 Aligned_cols=254 Identities=14% Similarity=0.187 Sum_probs=178.4
Q ss_pred CCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCCCCh-
Q 013811 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGSYNE- 107 (436)
Q Consensus 30 ~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~~~~- 107 (436)
.++|+|+|++|++||+|++++|+|.+|... +..+ .....+++|+.|+ ++|+|+||+++..+ ...+...++
T Consensus 2 ~~~l~v~g~~~~~nG~~~~l~Gvn~~~~~~-~~~~-~~~~~~~d~~~l~~~~G~N~vR~~~~~~------~~~~~~~~~~ 73 (291)
T 1egz_A 2 VEPLSVNGNKIYAGEKAKSFAGNSLFWSNN-GWGG-EKFYTADTVASLKKDWKSSIVRAAMGVQ------ESGGYLQDPA 73 (291)
T ss_dssp CCCEEEETTEEEETTEECCCEEEEEEECCT-TSSG-GGGCSHHHHHHHHHTTCCCEEEEEEECS------STTSTTTCHH
T ss_pred CCcEEecCCEEEECCCEEEEEEEeeccccc-ccCC-CccCCHHHHHHHHHHcCCCEEEEecccc------ccCCCcCCHH
Confidence 458999999999999999999999887641 1110 1223578999999 89999999965421 111112354
Q ss_pred hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccc
Q 013811 108 QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTG 187 (436)
Q Consensus 108 ~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg 187 (436)
..++.||.+|++|.++||+|||++|+. ++ +..++.+.+++++|++|
T Consensus 74 ~~~~~ld~~v~~a~~~Gi~vild~h~~----~~------------------------~~~~~~~~~~~~~ia~r------ 119 (291)
T 1egz_A 74 GNKAKVERVVDAAIANDMYAIIGWHSH----SA------------------------ENNRSEAIRFFQEMARK------ 119 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECS----CG------------------------GGGHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCC----Cc------------------------chhHHHHHHHHHHHHHH------
Confidence 579999999999999999999999863 10 22357888999999999
Q ss_pred cccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh-h
Q 013811 188 IHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV-A 266 (436)
Q Consensus 188 ~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~-~ 266 (436)
|+++|+|+ |+|+|||.+... .+.+.+|+++++++||+.||+|+|++|+.++ +... +.. .
T Consensus 120 --~~~~p~V~-~el~NEP~~~~~--~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~-~~~~--------------~~~~~ 179 (291)
T 1egz_A 120 --YGNKPNVI-YEIYNEPLQVSW--SNTIKPYAEAVISAIRAIDPDNLIIVGTPSW-SQNV--------------DEASR 179 (291)
T ss_dssp --HTTSTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHHHCSSSCEEECCHHH-HTCH--------------HHHHT
T ss_pred --hCCCCcEE-EEecCCCCCCch--HHHHHHHHHHHHHHHHhcCCCCEEEECCCCc-cccc--------------chhhc
Confidence 99999998 999999997531 3468999999999999999999999986543 1100 000 0
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-C-CChHHHHHHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-G-YSTYQRDVMFNTVY 344 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-g-~~~~~r~~~~~~~~ 344 (436)
+......+++++|.|+... . +++.++++.+.+ .++||+|+|||.....+ + .+.+.+..+++
T Consensus 180 ~p~~~~~~~~s~H~Y~~~~------~-------~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~g~~~~~~~~~~~~--- 242 (291)
T 1egz_A 180 DPINAKNIAYTLHFYAGTH------G-------ESLRNKARQALN-NGIALFVTEWGTVNADGNGGVNQTETDAWVT--- 242 (291)
T ss_dssp SCCCSSSEEEEEEEETTTC------C-------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCCCHHHHHHHHH---
T ss_pred CCCCCCCEEEEEEecCCCC------h-------HHHHHHHHHHHH-CCCcEEEecccCcCCCCCCCcCHHHHHHHHH---
Confidence 0001124589999997531 0 123444555554 79999999999976532 1 23333444432
Q ss_pred HHHHHHhhcCCCccceeecccccCC
Q 013811 345 YKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 345 ~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+ ++ ...|+++|+|.+.+
T Consensus 243 -~~----~~--~~~g~~~W~~~~~~ 260 (291)
T 1egz_A 243 -FM----RD--NNISNANWALNDKN 260 (291)
T ss_dssp -HH----HH--TTCCEEEEEECCSS
T ss_pred -HH----HH--CCCeEEEEecCCCC
Confidence 22 22 23799999999853
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-33 Score=287.58 Aligned_cols=297 Identities=19% Similarity=0.255 Sum_probs=205.9
Q ss_pred CEEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHH-HHHHHCCCCEEEEccccCCCCCCCccCCCCCChhh
Q 013811 32 FIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAF-HEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQM 109 (436)
Q Consensus 32 fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l-~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~ 109 (436)
.++++|++|+. +|++++++|+|.++....... ......+++| +.||++|+|+||+++. |..+++.||.|+++.
T Consensus 29 ~~~~~g~~i~d~~G~~~~l~GvN~~~~~~~~~~-g~~~~~~~di~~~l~~~G~N~VRl~v~----w~~~~p~~g~~~~~~ 103 (481)
T 2osx_A 29 GTALTPSYLKDDDGRSLILRGFNTASSAKSAPD-GMPQFTEADLAREYADMGTNFVRFLIS----WRSVEPAPGVYDQQY 103 (481)
T ss_dssp ----CCCCCBCTTCCEECCEEEEECGGGGTCTT-SCCSCCHHHHHHHHHHHCCCEEEEEEC----HHHHCSBTTBCCHHH
T ss_pred ccccCCCeEECCCCCEEEeeeEecCCCCCCCCC-CCccccHHHHHHHHHHCCCCEEEEeCc----HHHcCCCCCCcCHHH
Confidence 47999999997 899999999998765432211 1235678999 9999999999999653 556788899999999
Q ss_pred hhhHHHHHHHHHHcCCEEEEeccc-CCCC-------------CCChhhhhhHHhhc-CCCCCCC----------------
Q 013811 110 FKGLDFVIAEARKYGIKLILSLAN-NYDS-------------FGGKKQYVNWARSQ-GQFLTSD---------------- 158 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~~-~w~~-------------~gg~~~y~~W~~~~-G~~~~~~---------------- 158 (436)
|+.||++|++|+++||+|||++|+ .|.. +|| +.++.|.... |.+....
T Consensus 104 l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ng~~~gg-~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 182 (481)
T 2osx_A 104 LDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIG-NGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAF 182 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSBTTBCSSS-BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccccccccccccccccCC-CCCccceeccCCCCccccccchhhccchhhHHHH
Confidence 999999999999999999999996 3332 133 2456776421 1111000
Q ss_pred CCCC----CChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHHHHHHHHHHHHhhcc
Q 013811 159 DDFF----RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTIQAWITEMASYVKSI 230 (436)
Q Consensus 159 ~~f~----~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~ 230 (436)
..|| +++..++.+.++++.|++| ||++|+|++|+|+|||.+.... +.+.+.+|+++++++||+.
T Consensus 183 ~~f~~~~~~~~~~~~~~~~~~~~la~r--------yk~~p~Vi~~el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~ 254 (481)
T 2osx_A 183 DNFWNTTGKHPELVEHYAKAWRAVADR--------FADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQV 254 (481)
T ss_dssp HHHTTTTSSCTHHHHHHHHHHHHHHHH--------HTTCTTEEEEECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCCHHHHHHHHHHHHHHHHH--------hcCCCcEEEEEeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhh
Confidence 1345 5678899999999999999 9999999999999999986421 1346888999999999999
Q ss_pred CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCC----CCcceEEeecCCCC------CCCCCChhHhHHHHHH
Q 013811 231 DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI----PGIDFATVHSYPDQ------WLSSSNDRDQLSFLNN 300 (436)
Q Consensus 231 Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~----~~iD~~s~H~Y~~~------w~~~~~~~~~~~~~~~ 300 (436)
||+++|+++...+... + . .+ ..+.. ... ...+++++|.|+.. |... ........+..
T Consensus 255 dp~~~I~v~~~~~~~~----~-~-~~-----~~l~~-~~~p~~~~~~~v~s~H~Y~~~~~~~~~~~~~-~~~~~~~~~~~ 321 (481)
T 2osx_A 255 DQDTWVCVAPQAIGVN----Q-G-LP-----SGLTK-IDDPRAGQQRIAYCPHLYPLPLDIGDGHEGL-ARTLTDVTIDA 321 (481)
T ss_dssp CSSSEEEECCCSTTGG----G-T-CC-----CCCCC-CCCCSSSSCCEEECCBCCCHHHHHTTSSSHH-HHHHHHHHHHH
T ss_pred CCCcEEEEcCcccccc----c-C-CC-----CCCcc-cCCCcccCCCEEEEEEecCcccccCCccCcc-chhhHHHHHHH
Confidence 9999999987543110 0 0 00 00100 111 23569999999742 2110 00001123455
Q ss_pred HHHHHHHHHHHhc-CCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 301 WLDTHIQDAEHIL-RKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 301 ~i~~~~~~a~~~~-~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
|+..+.+.+++ . ++||+|+|||...+. ..+.+|++.+++.+.+. ..|+++|++.+
T Consensus 322 ~~~~~~~~~~~-~~g~Pv~igEfG~~~~~-----~~~~~~~~~~~~~~~~~------~ig~~~W~~~~ 377 (481)
T 2osx_A 322 WRANTAHTARV-LGDVPIILGSFGLDTTL-----PGARDYIERVYGTAREM------GAGVSYWSSDP 377 (481)
T ss_dssp HHHHHHHHHHH-TTSCCBEECBCCCCTTS-----TTHHHHHHHHHHHHHHH------TCEEEESCCSS
T ss_pred HHHHHHHHHHH-hcCCCEEEeccCCCCCc-----hHHHHHHHHHHHHHHHc------CCCeEEECCCC
Confidence 66666555655 7 999999999975432 24667888777654332 36999999976
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=264.74 Aligned_cols=253 Identities=17% Similarity=0.200 Sum_probs=178.9
Q ss_pred CCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCCC---
Q 013811 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGSY--- 105 (436)
Q Consensus 30 ~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~~--- 105 (436)
.++|+|+|++|+.||+|++++|+|.+|....-.. .....+++|+.|+ ++|+|+||+.+..+ +.++.|
T Consensus 2 l~~l~v~g~~i~~nG~~v~l~Gvn~~~~~~~~~~--~~~~~~~di~~~~~~~G~N~vRi~~~~~-------~~~~~~~~~ 72 (293)
T 1tvn_A 2 VEKLTVSGNQILAGGENTSFAGPSLFWSNTGWGA--EKFYTAETVAKAKTEFNATLIRAAIGHG-------TSTGGSLNF 72 (293)
T ss_dssp CCCEEEETTEEEETTEECCCEEEEECCCCTTSSC--GGGCSHHHHHHHHHHHCCSEEEEEEECC-------TTSTTSTTT
T ss_pred CCcEEecCCEEEeCCCEEEEEeeeecccccccCC--CCCCCHHHHHHHHHhcCCCEEEEecccc-------CCCCCcccc
Confidence 4689999999999999999999999876421111 1123478999999 59999999965321 222323
Q ss_pred C-hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 106 N-EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 106 ~-~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
+ +..++.||++|++|.++||+|||++|+.. + .+.++.+.+++++|++|
T Consensus 73 ~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~----~------------------------~~~~~~~~~~~~~~a~r--- 121 (293)
T 1tvn_A 73 DWEGNMSRLDTVVNAAIAEDMYVIIDFHSHE----A------------------------HTDQATAVRFFEDVATK--- 121 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEECSC----G------------------------GGCHHHHHHHHHHHHHH---
T ss_pred ChHHHHHHHHHHHHHHHHCCCEEEEEcCCCC----c------------------------cccHHHHHHHHHHHHHH---
Confidence 4 47899999999999999999999998641 1 01256788999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchh
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df 264 (436)
||++|+|+ |+|+|||.+... .+.+.+|+++++++||+.||+|+|++|+.++... . +.
T Consensus 122 -----~~~~p~V~-~el~NEP~~~~~--~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~-~--------------~~ 178 (293)
T 1tvn_A 122 -----YGQYDNVI-YEIYNEPLQISW--VNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD-V--------------DV 178 (293)
T ss_dssp -----HTTCTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTC-H--------------HH
T ss_pred -----hCCCCeEE-EEccCCCCCCch--HHHHHHHHHHHHHHHHhhCCCCEEEECCCCcccc-c--------------ch
Confidence 99999998 999999987531 2468899999999999999999999986543111 0 01
Q ss_pred h-hhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-C-CChHHHHHHHH
Q 013811 265 V-ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-G-YSTYQRDVMFN 341 (436)
Q Consensus 265 ~-~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-g-~~~~~r~~~~~ 341 (436)
. .+......+++++|.|+..+. +++.++++.+.+ .++||+|+|||.....+ + .+.+.+..+++
T Consensus 179 ~~~~p~~~~n~v~s~H~Y~~~~~-------------~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~g~~~~~~~~~~~~ 244 (293)
T 1tvn_A 179 ASQNPIDRANIAYTLHFYAGTHG-------------QSYRNKAQTALD-NGIALFATEWGTVNADGNGGVNINETDAWMA 244 (293)
T ss_dssp HHHSCCCSSSEEEEEEEETTTCC-------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCCCHHHHHHHHH
T ss_pred hccCCCCCCCEEEEEEeCCCCch-------------HHHHHHHHHHHH-CCCcEEEEcccCcCCCCCCCCCHHHHHHHHH
Confidence 0 010111346899999986421 123444545554 79999999999976532 1 23334444443
Q ss_pred HHHHHHHHHhhcCCCccceeecccccCC
Q 013811 342 TVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 342 ~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+ +. ...|+++|+|.+.+
T Consensus 245 ----~~-~~-----~~~g~~~W~~~~~~ 262 (293)
T 1tvn_A 245 ----FF-KT-----NNISHANWALNDKN 262 (293)
T ss_dssp ----HH-HH-----HTCCEEEEEESCSS
T ss_pred ----HH-HH-----CCCeeEEEecCCCC
Confidence 22 21 23799999999853
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=277.39 Aligned_cols=304 Identities=13% Similarity=0.139 Sum_probs=192.6
Q ss_pred CCCCCEEeeCCeEEE----CC--eEEEEEeecccccccccCCc--chhhhHHHHHHHHHHCCCCEEEEccccC----CCC
Q 013811 28 AGDGFIRTRGSHFLL----NG--NLYFANGFNAYWLMYVASDP--SQRSKVSTAFHEAASHGLTVARTWAFSD----GGY 95 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~----nG--kp~~~~G~N~~~~~~~~~~~--~~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~ 95 (436)
+..+||+|+|++|+. || +|++++|+|.++..+....+ .....++++|+.|+++|+|+||++...+ ...
T Consensus 36 ~~~~~l~v~G~~iv~~~~~~G~~~~v~l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRipi~~~~l~~~~~ 115 (458)
T 3qho_A 36 PTGIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTESVKPGTQ 115 (458)
T ss_dssp SSSEEEEEETTEEEEEETTTCCEEECCCEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEETGGGSTTCC
T ss_pred CCCCeEEEECCEEEEecCCCCCcceEEEEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEeeeHHHhCCCCC
Confidence 456899999999998 88 99999999976554321111 1234588999999999999999954311 000
Q ss_pred C---CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHH
Q 013811 96 R---PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYK 172 (436)
Q Consensus 96 ~---~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~ 172 (436)
+ .++..|..++++.|+.||++|++|.++||+|||++|+.- ++. ....|+++...++.+.
T Consensus 116 p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~---~~~---------------~~~~W~~~~~~~~~~~ 177 (458)
T 3qho_A 116 PIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIG---CTH---------------IEPLWYTEDFSEEDFI 177 (458)
T ss_dssp CCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESS---SSS---------------CCSSSCBTTBCHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCC---Ccc---------------CCCccCCchhhHHHHH
Confidence 0 012233334567899999999999999999999999752 110 0123344444578899
Q ss_pred HHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC----------------CChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 173 NLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD----------------PSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 173 ~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~----------------~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
++++.|++| ||++|+|++|+|+|||..... .+...+..++++++++||+.||+++|
T Consensus 178 ~~w~~lA~r--------yk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~dp~~lI 249 (458)
T 3qho_A 178 NTWIEVAKR--------FGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPHWLI 249 (458)
T ss_dssp HHHHHHHHH--------HTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHH--------hCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 999999999 999999999999999996310 12346888899999999999999999
Q ss_pred EeCCCcccCCCCCc--cccCCCCCcccchhhh--hcC--C-CCcceEEeecCCCCCCCC-----C-ChhHhHHHHHHHHH
Q 013811 237 EAGLEGFYGQSTPQ--RKRVNPNLDIGTDFVA--NNL--I-PGIDFATVHSYPDQWLSS-----S-NDRDQLSFLNNWLD 303 (436)
Q Consensus 237 ~vG~~g~~~~~~~~--~~~~np~~~~g~df~~--~~~--~-~~iD~~s~H~Y~~~w~~~-----~-~~~~~~~~~~~~i~ 303 (436)
.+++..+....... ...++..| |.++.. +.. . .+--++++|.|...-... . .++..+ .+...
T Consensus 250 iv~G~~w~~~~~~~~~~~~~~~ww--g~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~~~~---~~~w~ 324 (458)
T 3qho_A 250 FVEGTQFTNPKTDSSYKWGYNAWW--GGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNL---PDIWY 324 (458)
T ss_dssp EECCBSCCCHHHHHTSTTTTCCCT--TCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTTTTH---HHHHH
T ss_pred EEcCCcccCccccccccccccCcC--CCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchHHHH---HHHHH
Confidence 99987653310000 00011111 222221 111 1 123378999998542111 0 111111 11122
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 304 THIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 304 ~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+.....+..+.||+|+|||......+.+ . ...|+..+.+-+.+ . ++.++++|+|.++.
T Consensus 325 ~~~g~l~~~~~~Pl~igEfG~~~~~g~~~-~-~~~w~~~~~~yl~~----~-~i~~w~~W~~np~s 383 (458)
T 3qho_A 325 HHFGYVKLELGYSVVIGEFGGKYGHGGDP-R-DVIWQNKLVDWMIE----N-KFCDFFYWSWNPDS 383 (458)
T ss_dssp HHTTHHHHTTCCCBCBCBCCCCTTSSSCT-H-HHHHHHHHHHHHHH----T-TCCCEEESCSSSCC
T ss_pred hhhhhHhhcCCCcEEEEecCCCcCCCCCc-c-hHHHHHHHHHHHHh----c-CCCCEEEEecCCCC
Confidence 22222221268999999999986432211 1 23455555443322 1 46789999999863
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=264.20 Aligned_cols=258 Identities=18% Similarity=0.258 Sum_probs=178.8
Q ss_pred CCCCCEEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHH-HHCCCCEEEEccccCCCCCCCccCCC-C
Q 013811 28 AGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEA-ASHGLTVARTWAFSDGGYRPLQRSPG-S 104 (436)
Q Consensus 28 ~~~~fv~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l-~~~G~N~vRi~~~~d~~~~~lq~~pg-~ 104 (436)
+..|+|+|+|++|+ .||+|++++|+|.|+....+. ..-+++|+.| +++|+|+||+.+..+ .++ .
T Consensus 32 ~~~g~l~v~G~~l~d~nG~~v~l~Gvn~h~~~~~~~-----~~~~~~~~~l~~~~G~N~VRi~~~~~--------~~~~~ 98 (327)
T 3pzt_A 32 AKNGQLSIKGTQLVNRDGKAVQLKGISSHGLQWYGE-----YVNKDSLKWLRDDWGITVFRAAMYTA--------DGGYI 98 (327)
T ss_dssp --CCSCEEETTEEECTTSCBCCCEEEEESCHHHHGG-----GCSHHHHHHHHHHTCCSEEEEEEESS--------TTSTT
T ss_pred CcCCcEEEeCCEEECCCCCEEEEEEEcCCchhhcCC-----CCCHHHHHHHHHhcCCCEEEEEeEEC--------CCCcc
Confidence 45789999999999 499999999999887654421 2234578888 689999999966432 112 2
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
.+++.++.||++|++|.++||+|||++|... +|. .+...+.+.++++.|++|
T Consensus 99 ~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~---~~~----------------------~~~~~~~~~~~w~~~a~r--- 150 (327)
T 3pzt_A 99 DNPSVKNKVKEAVEAAKELGIYVIIDWHILN---DGN----------------------PNQNKEKAKEFFKEMSSL--- 150 (327)
T ss_dssp TCGGGHHHHHHHHHHHHHHTCEEEEEEECSS---SCS----------------------TTTTHHHHHHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEeccCC---CCC----------------------chHHHHHHHHHHHHHHHH---
Confidence 4788899999999999999999999998641 110 112356788999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchh
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df 264 (436)
||++|+|+ |+|+|||..... ..+.+.+++++++++||+.||+++|++|...+ +... ..+
T Consensus 151 -----~k~~p~Vi-~el~NEp~~~~~-w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w-~~~~-------------~~~ 209 (327)
T 3pzt_A 151 -----YGNTPNVI-YEIANEPNGDVN-WKRDIKPYAEEVISVIRKNDPDNIIIVGTGTW-SQDV-------------NDA 209 (327)
T ss_dssp -----HTTCTTEE-EECCSCCCSSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHH-HTCH-------------HHH
T ss_pred -----hCCCCcEE-EEeccCCCCCcc-cHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcc-cccc-------------hhh
Confidence 99999999 999999986432 12468899999999999999999999987433 2110 001
Q ss_pred hhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 013811 265 VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVY 344 (436)
Q Consensus 265 ~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~ 344 (436)
.........+++++|.|+... . +.+...++.+.+ .++|++|+|||.....+..+. . .++++.++
T Consensus 210 ~~~~~~~~n~v~s~H~Y~~~~------~-------~~~~~~~~~~~~-~g~Pv~igEfG~~~~~g~g~~-~-~~~~~~~l 273 (327)
T 3pzt_A 210 ADDQLKDANVMYALHFYAGTH------G-------QFLRDKANYALS-KGAPIFVTEWGTSDASGNGGV-F-LDQSREWL 273 (327)
T ss_dssp HTSCCCCTTEEEEEEEETTTC------C-------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCC-C-HHHHHHHH
T ss_pred hhCCCCCCCeEEEEEecCCCc------h-------HHHHHHHHHHHH-cCCcEEEEccCCCCCCCCCcc-c-HHHHHHHH
Confidence 111111234688999997531 1 123334444554 789999999998865421111 1 12334444
Q ss_pred HHHHHHhhcCCCccceeecccccCC
Q 013811 345 YKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 345 ~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+.+.+ ..+|+++|+|.+..
T Consensus 274 ~~~~~------~~i~w~~W~~~d~~ 292 (327)
T 3pzt_A 274 KYLDS------KTISWVNWNLSDKQ 292 (327)
T ss_dssp HHHHH------TTCCEEEEEESCCS
T ss_pred HHHHH------cCCeeEEEEecCCC
Confidence 43322 34799999999864
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-32 Score=270.08 Aligned_cols=275 Identities=17% Similarity=0.178 Sum_probs=184.9
Q ss_pred cCCCCCEEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCC
Q 013811 27 EAGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSY 105 (436)
Q Consensus 27 ~~~~~fv~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~ 105 (436)
++..++|+|+|++|+ .||+||+++|+|.++...... .....+++|+.||++|+|+||+.+.. ..+++. .
T Consensus 46 ~~~~~~l~v~G~~~~d~nG~~~~l~Gvn~~~~~~~~~---~g~~~~~di~~ik~~G~N~VRi~~~~----~~~~~~---~ 115 (359)
T 4hty_A 46 TRQLPLIKVEGNRFVDEQGKTIVFRGVNISDPDKIDK---DKRFSKKHFEVIRSWGANVVRVPVHP----RAWKER---G 115 (359)
T ss_dssp CCCCCCCEEETTEEECTTCCEECCEEEEECCHHHHHH---TTCCSHHHHHHHHHTTCSEEEEEECH----HHHHHH---H
T ss_pred CCCCCcEEEeCCEEECCCCCEEEEEEEecCCcccCCC---CCCcCHHHHHHHHhcCCCEEEEeccH----HHhhcc---C
Confidence 345688999999999 799999999999876543210 11234789999999999999996432 122221 2
Q ss_pred ChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChH---HHHHHHHHHHHHHhcc
Q 013811 106 NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPV---VKGYYKNLIKTVLNRY 182 (436)
Q Consensus 106 ~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~---~~~~~~~~v~~iv~r~ 182 (436)
++..|+.||++|++|.++||+|||++|... +. ...+|.++. .++.+.+++++|++|
T Consensus 116 ~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~----~~----------------~~~~~~~~~~~~~~~~~~~~~~~la~r- 174 (359)
T 4hty_A 116 VKGYLELLDQVVAWNNELGIYTILDWHSIG----NL----------------KSEMFQNNSYHTTKGETFDFWRRVSER- 174 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECCEE----ET----------------TTTEESSGGGCCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCCC----CC----------------CcccccCCcchhHHHHHHHHHHHHHHH-
Confidence 467899999999999999999999998641 10 012344443 368889999999999
Q ss_pred ccccccccCCCCcEEEEEeecCCCCCCC----CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCC
Q 013811 183 NTFTGIHYKDDPTIMAWELMNEPRCTSD----PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL 258 (436)
Q Consensus 183 n~~tg~~yk~~p~I~~weL~NEp~~~~~----~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~ 258 (436)
||++|+|++|+|+|||..... .+.+.+.+++++++++||+.||+++|++|...+ +...
T Consensus 175 -------yk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w-~~~~---------- 236 (359)
T 4hty_A 175 -------YNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNW-AYDL---------- 236 (359)
T ss_dssp -------TTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHH-HTCC----------
T ss_pred -------hCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCccc-cccc----------
Confidence 999999999999999986421 234678999999999999999999999986432 2110
Q ss_pred cccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-CC--ChHH
Q 013811 259 DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-GY--STYQ 335 (436)
Q Consensus 259 ~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-g~--~~~~ 335 (436)
..+..........++++|.|+.... .. +...|... .... . .++||+|+|||...... +. +...
T Consensus 237 ---~~~~~~p~~~~n~~ys~H~Y~~~~~--~~------~~~~~~~~-~~~~-~-~~~Pv~vtEfG~~~~~g~g~~~~~~~ 302 (359)
T 4hty_A 237 ---KEAAANPIDRQNIAYVSHPYPQKVG--AP------YQANWERD-FGFM-A-DKYPVFATEIGYQRATDKGAHIPVID 302 (359)
T ss_dssp ---HHHHHSCCSSSSEEEECCCCTTSSC--SS------HHHHHHHH-TGGG-G-GTSCEEEEEECCBCTTSTTCCTTSBC
T ss_pred ---chhhcCCCCCCCEEEEEEeCCCCCC--cc------hHHHHHHH-HHHH-h-cCCCEEEecccCCCCCCCCccccccc
Confidence 0010000011223789999986421 11 11223221 1111 1 48999999999876431 11 1112
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccceeecccccCCC
Q 013811 336 RDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 336 r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~ 370 (436)
+.+|.+.+++.+.+ ..+|+++|+|.++..
T Consensus 303 ~~~y~~~~~~~~~~------~~i~~~~Ws~~~~~~ 331 (359)
T 4hty_A 303 DGSYGPRITDYFNS------KGISWVAWVFDPDWS 331 (359)
T ss_dssp CSTHHHHHHHHHHH------HTCEEEEEEESSSSS
T ss_pred HHHHHHHHHHHHHH------cCCeEEEEEeCCCCc
Confidence 34555555544333 246999999998653
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=257.22 Aligned_cols=259 Identities=15% Similarity=0.187 Sum_probs=179.5
Q ss_pred CCCCCEEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCC-C
Q 013811 28 AGDGFIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPG-S 104 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg-~ 104 (436)
+..|.++|+|++|+. ||+|++++|+|.+++.... ...-+++|+.|+ ++|+|+||+.+..+ .++ .
T Consensus 7 ~~~g~l~v~G~~l~d~nG~~v~lrGvn~~~~~~~~-----~~~~~~~~~~l~~~~G~N~VRip~~~~--------~~~~~ 73 (303)
T 7a3h_A 7 EEHGQLSISNGELVNERGEQVQLKGMSSHGLQWYG-----QFVNYESMKWLRDDWGINVFRAAMYTS--------SGGYI 73 (303)
T ss_dssp HHHCSCEEETTEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHHHTCCCEEEEEEESS--------TTSTT
T ss_pred CCCCeEEEeCCEEECCCCCEEEEEEeccCcccccc-----ccCCHHHHHHHHHhcCCCEEEEEEEeC--------CCCcc
Confidence 345789999999995 9999999999987665432 122357889997 79999999966421 112 2
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
.+++.++.||++|++|.++||+|||++|+.. |+. .....+.+.++++.|++|
T Consensus 74 ~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~---~~~----------------------~~~~~~~~~~~w~~ia~r--- 125 (303)
T 7a3h_A 74 DDPSVKEKVKEAVEAAIDLDIYVIIDWHILS---DND----------------------PNIYKEEAKDFFDEMSEL--- 125 (303)
T ss_dssp TCTTHHHHHHHHHHHHHHHTCEEEEEEECSS---SCS----------------------TTTTHHHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecccC---CCC----------------------chHHHHHHHHHHHHHHHH---
Confidence 3778899999999999999999999999741 110 011245678999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchh
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df 264 (436)
|+++|+|+ |+|+|||........+.+..++++++++||+.||+++|++|...+ +... ..+
T Consensus 126 -----~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w-~~~~-------------~~~ 185 (303)
T 7a3h_A 126 -----YGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTW-SQDV-------------HHA 185 (303)
T ss_dssp -----HTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHH-HTBH-------------HHH
T ss_pred -----hCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCc-ccch-------------hhH
Confidence 99999998 999999997422112468899999999999999999999986543 1100 001
Q ss_pred hhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHH
Q 013811 265 VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVY 344 (436)
Q Consensus 265 ~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~ 344 (436)
..........++++|.|+... . ++++..++.+.+ .++|++|+|||.....+..+. -..+++.++
T Consensus 186 ~~~p~~~~n~v~s~H~Y~~~~------~-------~~~~~~~~~~~~-~g~P~~igEfG~~~~~~~g~~--~~~~~~~~l 249 (303)
T 7a3h_A 186 ADNQLADPNVMYAFHFYAGTH------G-------QNLRDQVDYALD-QGAAIFVSEWGTSAATGDGGV--FLDEAQVWI 249 (303)
T ss_dssp HTSCCSCTTEEEEEEEETTSC------C-------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCC--CHHHHHHHH
T ss_pred hhCCCCCCCEEEEEEecCCCc------h-------HHHHHHHHHHHH-cCCCEEEECCCCCCCCCCCcc--cHHHHHHHH
Confidence 100111233578999997531 0 124444555554 799999999999865421111 112334444
Q ss_pred HHHHHHhhcCCCccceeecccccCC
Q 013811 345 YKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 345 ~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+.+ ++ ...|+++|+|.+.+
T Consensus 250 ~~~----~~--~~i~w~~W~~~~~~ 268 (303)
T 7a3h_A 250 DFM----DE--RNLSWANWSLTHKD 268 (303)
T ss_dssp HHH----HH--TTCCEEEEEESCCS
T ss_pred HHH----Hh--cCCceEEEEecCCC
Confidence 433 22 35789999999864
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=251.02 Aligned_cols=254 Identities=17% Similarity=0.211 Sum_probs=175.4
Q ss_pred CCCCEEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCCh
Q 013811 29 GDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNE 107 (436)
Q Consensus 29 ~~~fv~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~ 107 (436)
..+ |+|+|++|+ .||+|++++|+| ||..... ...+++|+.|+++|+|+||+.+. + .+.|++
T Consensus 22 ~~~-l~V~G~~l~d~nG~~~~lrGvn-~~~~~~~------~~~~~~i~~lk~~G~N~VRip~~-~---------~~~~~~ 83 (345)
T 3jug_A 22 SSG-FYVDGNTLYDANGQPFVMKGIN-HGHAWYK------DTASTAIPAIAEQGANTIRIVLS-D---------GGQWEK 83 (345)
T ss_dssp -CC-CEEETTEEECTTSCBCCCEEEE-ECGGGCG------GGHHHHHHHHHHTTCSEEEEEEC-C---------SSSSCC
T ss_pred CCC-eEEECCEEEccCCCEEEEeccc-ccccccC------hHHHHHHHHHHHcCCCEEEEEec-C---------CCccCH
Confidence 344 899999999 699999999999 5554321 34568999999999999999543 2 134667
Q ss_pred hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccc
Q 013811 108 QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTG 187 (436)
Q Consensus 108 ~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg 187 (436)
+.++.||++|++|.++||+|||++|+.. |+ .+....+.+.++|+.|++|
T Consensus 84 ~~l~~ld~~v~~a~~~GiyVIlDlH~~~---g~----------------------~~~~~~~~~~~~w~~iA~r------ 132 (345)
T 3jug_A 84 DDIDTVREVIELAEQNKMVAVVEVHDAT---GR----------------------DSRSDLDRAVDYWIEMKDA------ 132 (345)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECTTT---TC----------------------CCHHHHHHHHHHHHHTHHH------
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeccCC---CC----------------------CcHHHHHHHHHHHHHHHHH------
Confidence 7899999999999999999999999741 10 1233578899999999999
Q ss_pred cccCCC-CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 188 IHYKDD-PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 188 ~~yk~~-p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
||++ +.| +|+|+|||.... +...+.+.+++++++||+.||+++|++|..++ +.... ... ..+.++..
T Consensus 133 --yk~~~~~V-i~el~NEP~~~~--~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w-~~~~~-~~~-----~~~~~~~~ 200 (345)
T 3jug_A 133 --LIGKEDTV-IINIANEWYGSW--DGAAWADGYIDVIPKLRDAGLTHTLMVDAAGW-GQYPQ-SIH-----DYGQDVFN 200 (345)
T ss_dssp --HTTCTTTE-EEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTBTH-HHH-----HHHHHHHH
T ss_pred --HcCCCCeE-EEEecCCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCc-cccch-hhc-----cchhhhcc
Confidence 9999 566 599999998732 34567778899999999999999999987553 21100 000 00011111
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~ 346 (436)
......+++++|.|. |... . .+.+...++.+.+ .++||+|+|||....... . .++.+++.
T Consensus 201 -~dp~~nlvys~H~Y~--~~g~-~--------~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~-~------~~~~~l~~ 260 (345)
T 3jug_A 201 -ADPLKNTIFSIHMYE--YAGG-D--------ANTVRSNIDRVID-QDLALVIGEFGHRHTDGD-V------DEDTILSY 260 (345)
T ss_dssp -TCTTCCEEEEEEEST--TTTS-S--------HHHHHHHHHHHHT-TTCCEEEEEECCCCCC---C------CHHHHHHH
T ss_pred -cCCccceEEEEEecC--CCCC-C--------HHHHHHHHHHHHH-cCCcEEEECcCCCCCCCC-H------HHHHHHHH
Confidence 111234588999994 3221 1 1234455555554 799999999999865321 1 12333332
Q ss_pred HHHHhhcCCCccceeecccccCC
Q 013811 347 IYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 347 i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+ ++ ..+||++|+|.+.+
T Consensus 261 ~----~~--~~i~w~~W~~~~~~ 277 (345)
T 3jug_A 261 S----EE--TGTGWLAWSWKGNS 277 (345)
T ss_dssp H----HH--HTCEEEESCSSCCC
T ss_pred H----HH--cCCEEEEEEEECCC
Confidence 2 22 35799999999875
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-30 Score=250.20 Aligned_cols=265 Identities=20% Similarity=0.264 Sum_probs=185.5
Q ss_pred CCeEEEEEeeccc-ccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHH
Q 013811 43 NGNLYFANGFNAY-WLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAE 119 (436)
Q Consensus 43 nGkp~~~~G~N~~-~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~ 119 (436)
||++++++|+|.. |+........+....+++|+.||++|+|+||+.+. |..+++. ++.++++.++.+|.+|+.
T Consensus 7 ~g~~~~~~GvN~~~~~~~~~~~~w~~~~~~~d~~~l~~~G~n~vR~~i~----w~~~~~~~~~~~~~~~~~~~~d~~v~~ 82 (317)
T 3aof_A 7 ERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIR----WSTHAYAFPPYKIMDRFFKRVDEVING 82 (317)
T ss_dssp HHHHHHCEEEECCSSTTSSSTTTTSCCCCTHHHHHHHHHTCSEEEECCC----GGGGBCSSTTCCBCHHHHHHHHHHHHH
T ss_pred hhcccccccCcccccccCCCCCcCCCCCCHHHHHHHHHcCCCEEEEecc----HHHhcCCCCCCcCCHHHHHHHHHHHHH
Confidence 7899999999986 55321000112234588999999999999999643 4344443 446779999999999999
Q ss_pred HHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEE
Q 013811 120 ARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~w 199 (436)
|.++||+|||++|+. +.|. .+++..++.+.++++.|++| |+++|+|++|
T Consensus 83 a~~~Gi~vild~h~~----------~~~~-------------~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~~ 131 (317)
T 3aof_A 83 ALKRGLAVVINIHHY----------EELM-------------NDPEEHKERFLALWKQIADR--------YKDYPETLFF 131 (317)
T ss_dssp HHHTTCEEEEECCCC----------HHHH-------------HCHHHHHHHHHHHHHHHHHH--------HTTSCTTEEE
T ss_pred HHHCCCEEEEEecCC----------cccc-------------CCcHHHHHHHHHHHHHHHHH--------hcCCCCeEEE
Confidence 999999999999864 1121 12456789999999999999 9999999999
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEee
Q 013811 200 ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVH 279 (436)
Q Consensus 200 eL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H 279 (436)
+|+|||.+.. +.+.+.+++++++++||+.||+++|++|+.++..... . .++.. ......+++++|
T Consensus 132 el~NEP~~~~--~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~~~~~~~---------~---~~~~~-p~~~~~~v~~~H 196 (317)
T 3aof_A 132 EILNAPHGNL--TPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISA---------L---EKLSV-PKWEKNSIVTIH 196 (317)
T ss_dssp ECCSSCCTTS--CHHHHHHHHHHHHHHHHHHCSSSCEEECCSGGGSSTT---------G---GGCCC-CTTCCSEEEEEE
T ss_pred EeccCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCEEEECCCCcCcHhH---------H---hhCcC-CCCCCCEEEEEe
Confidence 9999999743 4578899999999999999999999998754422100 0 01100 011245799999
Q ss_pred cCCC--------CCCCCCC--------hhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHH
Q 013811 280 SYPD--------QWLSSSN--------DRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTV 343 (436)
Q Consensus 280 ~Y~~--------~w~~~~~--------~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~ 343 (436)
.|+. .|..... .......+.+.+....+.+++ .++||+|+|||..... +.+.+..|++.+
T Consensus 197 ~Y~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~~~~~ 272 (317)
T 3aof_A 197 YYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKK-NKRPIYIGEFGAYRKA---DLESRIKWTSFV 272 (317)
T ss_dssp CCCSHHHHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEECCCCTTS---CHHHHHHHHHHH
T ss_pred ccCCcccccCCCCCcCcccccCCcCcCcHHHHHHHHHHHHHHHHHHHH-cCCCEEEeeccccCCC---CHHHHHHHHHHH
Confidence 9974 2432100 011122334445554444554 7999999999997642 456778888877
Q ss_pred HHHHHHHhhcCCCccceeeccccc
Q 013811 344 YYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 344 ~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
++.+.+ ...|+++|++.+
T Consensus 273 ~~~~~~------~~ig~~~W~~~~ 290 (317)
T 3aof_A 273 VREMEK------RRWSLAYWEFCS 290 (317)
T ss_dssp HHHHHH------TTCEEEESCSSS
T ss_pred HHHHHH------cCCEEEEEeCCC
Confidence 765433 236999999975
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=245.78 Aligned_cols=255 Identities=15% Similarity=0.206 Sum_probs=170.4
Q ss_pred CEEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhh
Q 013811 32 FIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF 110 (436)
Q Consensus 32 fv~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l 110 (436)
.++|+|++|+ .||+|++++|+|.+ .... + ...++|+.||++|+|+||+++..+..| ....+
T Consensus 3 ~l~v~G~~i~d~nG~~~~l~Gvn~~-~~w~---~----~~~~~~~~lk~~G~N~VRi~~~~~~~w----------~~~~~ 64 (302)
T 1bqc_A 3 GLHVKNGRLYEANGQEFIIRGVSHP-HNWY---P----QHTQAFADIKSHGANTVRVVLSNGVRW----------SKNGP 64 (302)
T ss_dssp CSEEETTEEECTTSCBCCCEEEEEC-TTTC---T----TCTTHHHHHHHTTCSEEEEEECCSSSS----------CCCCH
T ss_pred ceEEeCCEEECCCCCEEEEEEeecc-cccC---c----chHHHHHHHHHcCCCEEEEEccCCccc----------CCCCH
Confidence 3799999999 59999999999953 1111 1 112789999999999999965321112 22347
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
+.+|++|++|.++||+|||++|+.. |. +. . +++...+.+.+++++|++| |
T Consensus 65 ~~ld~~v~~a~~~Gi~Vild~h~~~----~~----------~~---~-----~~~~~~~~~~~~w~~ia~~--------~ 114 (302)
T 1bqc_A 65 SDVANVISLCKQNRLICMLEVHDTT----GY----------GE---Q-----SGASTLDQAVDYWIELKSV--------L 114 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEGGGT----TT----------TT---S-----TTCCCHHHHHHHHHHTHHH--------H
T ss_pred HHHHHHHHHHHHCCCEEEEEeccCC----CC----------CC---C-----CchhhHHHHHHHHHHHHHH--------h
Confidence 8999999999999999999998642 10 00 0 2234567889999999999 9
Q ss_pred CCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCc--ccchhhhhc
Q 013811 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD--IGTDFVANN 268 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~--~g~df~~~~ 268 (436)
|++|+|++|+|+|||........+.+..++++++++||+.||+++|++|+.++ +.... ... .+.++....
T Consensus 115 k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~-~~~~~-------~~~~~~~~~~~~~~ 186 (302)
T 1bqc_A 115 QGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNW-GQDWT-------NTMRNNADQVYASD 186 (302)
T ss_dssp TTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTT-TTCTT-------CHHHHHHHHHHHTC
T ss_pred cCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCcc-ccCch-------hhhhccchhccccC
Confidence 99999999999999987532111237788999999999999999999986543 21100 000 001111111
Q ss_pred CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 013811 269 LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIY 348 (436)
Q Consensus 269 ~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~ 348 (436)
. ...+++++|.|+.. .. . +.++++++.+.+ .++||+|+|||....... . . ++.+++.+
T Consensus 187 ~-~~~~v~s~H~Y~~~-~~----~-------~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~-~--~----~~~~~~~~- 244 (302)
T 1bqc_A 187 P-TGNTVFSIHMYGVY-SQ----A-------STITSYLEHFVN-AGLPLIIGEFGHDHSDGN-P--D----EDTIMAEA- 244 (302)
T ss_dssp T-TCCEEEEEEESGGG-CS----H-------HHHHHHHHHHHH-HTCCEEEEEECCTTSTTC-C--C----HHHHHHHH-
T ss_pred C-CCCEEEEEEEccCC-CC----H-------HHHHHHHHHHHH-CCCCEEEEeecCCCCCCc-h--H----HHHHHHHH-
Confidence 1 23458899999853 11 1 123334444444 699999999999876421 1 1 23333322
Q ss_pred HHhhcCCCccceeecccccCC
Q 013811 349 SSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 349 ~~~~~~~~~~G~~~W~~~~~g 369 (436)
++ ...|+++|+|.+.+
T Consensus 245 ---~~--~~i~~~~W~~~~~~ 260 (302)
T 1bqc_A 245 ---ER--LKLGYIGWSWSGNG 260 (302)
T ss_dssp ---HH--HTCEEEESCSSCCC
T ss_pred ---HH--cCCEEEEeeccCCC
Confidence 22 24799999999864
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-29 Score=244.85 Aligned_cols=257 Identities=15% Similarity=0.181 Sum_probs=173.7
Q ss_pred CCCCEEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGFIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..++|+|+|++|+. ||+|++++|+|.++...... ...+++|+.|+ ++|+|+||+.+..+ .....++
T Consensus 7 ~~~~l~v~G~~i~d~~G~~v~l~Gvn~~~~~w~~~-----~~~~~d~~~l~~~~G~N~vRi~~~~~-------~~~~~~~ 74 (306)
T 2cks_A 7 RYGKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDH-----CLTDSSLDALAYDWKADIIRLSMYIQ-------EDGYETN 74 (306)
T ss_dssp HHCSCEEETTEEECTTSCBCCCEEEECCCHHHHGG-----GCSHHHHHHHHHTSCCSEEEEEEESS-------TTSGGGC
T ss_pred CCCeEEEECCEEECCCCCEEEEEEEecCcccccCc-----CCCHHHHHHHHHHcCCCEEEEEeeec-------CCCcccC
Confidence 34789999999974 99999999999875543311 12357888886 69999999965421 0112356
Q ss_pred hh-hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 107 EQ-MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 107 ~~-~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
++ .++.||++|++|.++||+|||++|+.. +|.+ ....+.+.+++++|++|
T Consensus 75 ~~~~l~~ld~~v~~a~~~Gl~vild~h~~~---~g~~----------------------~~~~~~~~~~~~~ia~~---- 125 (306)
T 2cks_A 75 PRGFTDRMHQLIDMATARGLYVIVDWHILT---PGDP----------------------HYNLDRAKTFFAEIAQR---- 125 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCS---SCCG----------------------GGGHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEecCCC---CCCc----------------------ccCHHHHHHHHHHHHHH----
Confidence 65 789999999999999999999998741 1110 01246788899999999
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~ 265 (436)
||++|+|+ |+|+|||... +...+.+++++++++||+.||+|+|+++...+-.... + .+.+..
T Consensus 126 ----y~~~~~V~-~el~NEP~~~---~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~---------~-~~~~~~ 187 (306)
T 2cks_A 126 ----HASKTNVL-YEIANEPNGV---SWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGV---------S-EGSGPA 187 (306)
T ss_dssp ----HTTCSSEE-EECCSCCCSS---CHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHSTTG---------G-GTCCTH
T ss_pred ----hCCCCcEE-EEcCCCCCCC---CHHHHHHHHHHHHHHHHHhCCCCEEEECCCCcccccc---------c-cccchh
Confidence 99999998 9999999874 2456788999999999999999999998754311100 0 011211
Q ss_pred hhcCCC---CcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-C-CChHHHHHHH
Q 013811 266 ANNLIP---GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-G-YSTYQRDVMF 340 (436)
Q Consensus 266 ~~~~~~---~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-g-~~~~~r~~~~ 340 (436)
.....| ..+++++|.|+.... . .+.+.++.+. .++||+|+|||.....+ + .+.+.+..
T Consensus 188 ~~~~~p~~~~~~v~s~H~Y~~~~~---------~----~~~~~~~~~~--~~~Pv~igEfG~~~~~g~~~~~~~~~~~-- 250 (306)
T 2cks_A 188 EIAANPVNASNIMYAFHFYAASHR---------D----NYLNALREAS--ELFPVFVTEFGTETYTGDGANDFQMADR-- 250 (306)
T ss_dssp HHHHSCCSCSSEEEEEEEETTTCC---------H----HHHHHHHHHH--HHSCEEEEEEESSCTTSCSCCCHHHHHH--
T ss_pred hhhcCCCCcCCeEEEEeeCCCCcc---------H----HHHHHHHHHh--cCCcEEEEcccCCcCCCCCCcCHHHHHH--
Confidence 111112 245899999986421 1 1122333333 48999999999976431 1 22233333
Q ss_pred HHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 341 NTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 341 ~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+++.+.+ ...|+++|+|.+.+
T Consensus 251 --~~~~~~~------~~ig~~~W~~~~~~ 271 (306)
T 2cks_A 251 --YIDLMAE------RKIGWTKWNYSDDF 271 (306)
T ss_dssp --HHHHHHH------HTCCEEEECCSCCS
T ss_pred --HHHHHHH------cCCCeEEEecCCCC
Confidence 3333222 24699999998864
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=236.41 Aligned_cols=248 Identities=18% Similarity=0.220 Sum_probs=170.1
Q ss_pred EEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhh
Q 013811 33 IRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFK 111 (436)
Q Consensus 33 v~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~ 111 (436)
++|+|++|+. ||+|++++|+|.. ..+. + ...+++|+.||++|+|+||+++. ++ +.|+++.++
T Consensus 2 l~v~G~~i~d~~G~~~~lrGvn~~-~~w~---~---~~~~~~~~~i~~~G~N~VRi~~~-~~---------~~~~~~~~~ 64 (294)
T 2whl_A 2 FSVDGNTLYDANGQPFVMRGINHG-HAWY---K---DTASTAIPAIAEQGANTIRIVLS-DG---------GQWEKDDID 64 (294)
T ss_dssp CEEETTEEECTTSCBCCCEEEEEC-GGGC---G---GGHHHHHHHHHHTTCSEEEEEEC-CS---------SSSCCCCHH
T ss_pred eEEECCEEECCCCCEEEEEEeecc-cccC---C---cchHHHHHHHHHcCCCEEEEEec-CC---------CccCccHHH
Confidence 5899999996 9999999999952 2111 1 23678999999999999999543 21 235566799
Q ss_pred hHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccC
Q 013811 112 GLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191 (436)
Q Consensus 112 ~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk 191 (436)
.||++|++|.++||+|||++|+.. | +.+....+.+.+++++|++| |+
T Consensus 65 ~ld~~v~~a~~~Gi~Vild~H~~~----~---------------------~~~~~~~~~~~~~w~~ia~~--------y~ 111 (294)
T 2whl_A 65 TIREVIELAEQNKMVAVVEVHDAT----G---------------------RDSRSDLNRAVDYWIEMKDA--------LI 111 (294)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTT----T---------------------CCCHHHHHHHHHHHHHTHHH--------HT
T ss_pred HHHHHHHHHHHCCCEEEEEeccCC----C---------------------CCcchhHHHHHHHHHHHHHH--------Hc
Confidence 999999999999999999998641 1 01224577889999999999 99
Q ss_pred CC-CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCC
Q 013811 192 DD-PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI 270 (436)
Q Consensus 192 ~~-p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~ 270 (436)
++ |.| +|+|+|||... .+.+.+..++++++++||+.||+++|++|..++ +. .... ....+.++. ...
T Consensus 112 ~~~~~v-~~el~NEP~~~--~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~-~~-~~~~-----~~~~~~~~~--~~d 179 (294)
T 2whl_A 112 GKEDTV-IINIANEWYGS--WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGW-GQ-YPQS-----IHDYGQDVF--NAD 179 (294)
T ss_dssp TCTTTE-EEECCTTCCCS--SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TT-BTHH-----HHHHHHHHH--HTC
T ss_pred CCCCeE-EEEecCCCCCC--CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC-CC-Cchh-----hhhhhhccc--cCC
Confidence 99 555 69999999874 234567778889999999999999999986543 11 0000 000000111 111
Q ss_pred C-CcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 013811 271 P-GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 271 ~-~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~ 349 (436)
+ ..+++++|.|+.. + . . .+.+..+++.+.+ .++||+|+|||.... + . +++.+++.+.+
T Consensus 180 ~~~n~v~s~H~Y~~~-~-~-~--------~~~~~~~~~~~~~-~~~Pv~igEfG~~~~-~-~-------~~~~~~~~~~~ 238 (294)
T 2whl_A 180 PLKNTMFSIHMYEYA-G-G-D--------ANTVRSNIDRVID-QDLALVIGEFGHRHT-D-V-------DEDTILSYSEE 238 (294)
T ss_dssp TTCCEEEEEEESTTT-T-S-S--------HHHHHHHHHHHHT-TTCCEEEEEECCCCC-C-C-------CHHHHHHHHHH
T ss_pred CcCCEEEEEEeccCC-C-C-c--------HHHHHHHHHHHHH-CCCCEEEEccCCCCC-C-c-------cHHHHHHHHHH
Confidence 1 2347899999532 1 1 1 1224445555554 799999999998765 1 1 12333333222
Q ss_pred HhhcCCCccceeecccccCC
Q 013811 350 SAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g 369 (436)
...||++|+|.+.+
T Consensus 239 ------~~i~w~~W~~~~~~ 252 (294)
T 2whl_A 239 ------TGTGWLAWSWKGNS 252 (294)
T ss_dssp ------HTCEEEESCSSCCC
T ss_pred ------cCCeEEEEEecCCC
Confidence 24699999999864
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=242.53 Aligned_cols=268 Identities=17% Similarity=0.236 Sum_probs=183.5
Q ss_pred EEEeeccc-cccc-ccCCc--chhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHH
Q 013811 48 FANGFNAY-WLMY-VASDP--SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEAR 121 (436)
Q Consensus 48 ~~~G~N~~-~~~~-~~~~~--~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~ 121 (436)
+++|+|+- |+.. ..... .+....+++|+.||++|+|+||+++. |..+++. +|.++++.++.||++|+.|.
T Consensus 4 ~~~G~Nlg~~~~~~~~~~~~~~~~~~~~~d~~~i~~~G~n~vRi~i~----~~~~~~~~~~g~~~~~~~~~l~~~v~~a~ 79 (343)
T 1ceo_A 4 FKAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFD----YPIIESDDNVGEYKEDGLSYIDRCLEWCK 79 (343)
T ss_dssp CSEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEE----GGGTBCSSSTTCBCHHHHHHHHHHHHHHH
T ss_pred ccceeehhhhhccCCccchhhhhcccCHHHHHHHHHcCCCEEEecCC----HHHhccccCCCcccHHHHHHHHHHHHHHH
Confidence 46899974 4332 10111 12234588999999999999999654 3345543 48899999999999999999
Q ss_pred HcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 122 KYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 122 ~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
++||+|||++|+.. |+ + |.. .+ ...+|+++..++.+.++++.|++| |+++|+|++|+|
T Consensus 80 ~~Gi~vildlh~~~---g~--~---~~~-~~-----~~~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~~el 137 (343)
T 1ceo_A 80 KYNLGLVLDMHHAP---GY--R---FQD-FK-----TSTLFEDPNQQKRFVDIWRFLAKR--------YINEREHIAFEL 137 (343)
T ss_dssp HTTCEEEEEEEECC---C-------------------CCTTTCHHHHHHHHHHHHHHHHH--------TTTCCSSEEEEC
T ss_pred HCCCEEEEEecCCC---cc--c---cCC-CC-----cccCcCCHHHHHHHHHHHHHHHHH--------hcCCCCeEEEEe
Confidence 99999999999752 21 1 211 01 136889999999999999999999 999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecC
Q 013811 202 MNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSY 281 (436)
Q Consensus 202 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y 281 (436)
+|||.... .+.+.+++++++++||+.||+++|++++.++... .. + ..+. .... ...++++|.|
T Consensus 138 ~NEP~~~~---~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~~~~~-~~--------~---~~~~-~~~~-~~~v~~~H~Y 200 (343)
T 1ceo_A 138 LNQVVEPD---STRWNKLMLECIKAIREIDSTMWLYIGGNNYNSP-DE--------L---KNLA-DIDD-DYIVYNFHFY 200 (343)
T ss_dssp CSCCCCSS---SHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHCG-GG--------G---GGSC-CCCC-SSEEEEEEEC
T ss_pred ccCCCCcc---hHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcCCH-HH--------H---hhcC-cCCC-CCEEEEeecc
Confidence 99999863 4678999999999999999999999987543211 00 0 0111 1112 2347899999
Q ss_pred CC--------CCCCC-------CChhH--------------------------hHHHHHHHHHHHHHHHHHhcCCcEEEE
Q 013811 282 PD--------QWLSS-------SNDRD--------------------------QLSFLNNWLDTHIQDAEHILRKPILLA 320 (436)
Q Consensus 282 ~~--------~w~~~-------~~~~~--------------------------~~~~~~~~i~~~~~~a~~~~~kPv~i~ 320 (436)
.. .|... ...+. ...++.+.+....+.+.+ .++||+|+
T Consensus 201 ~~~~ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~Pv~ig 279 (343)
T 1ceo_A 201 NPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREK-KKCKLYCG 279 (343)
T ss_dssp CSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHH-HCCEEEEE
T ss_pred CccccCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhccccccCHHHHHHHHHHHHHHHHH-hCCCEEec
Confidence 63 23210 00000 012233344444444554 79999999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 321 EFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 321 EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
|||..... +.+.+..|++.+++.+.+ ...|+++|++.++
T Consensus 280 EfG~~~~~---~~~~~~~~~~~~~~~~~~------~~ig~~~W~~~~~ 318 (343)
T 1ceo_A 280 EFGVIAIA---DLESRIKWHEDYISLLEE------YDIGGAVWNYKKM 318 (343)
T ss_dssp EECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCSBST
T ss_pred ccccccCC---ChHHHHHHHHHHHHHHHH------cCCCeEEeecCCC
Confidence 99998653 445677888877765433 2479999999873
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=242.67 Aligned_cols=270 Identities=17% Similarity=0.212 Sum_probs=182.9
Q ss_pred ECCeEEEEEeeccc-ccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHH
Q 013811 42 LNGNLYFANGFNAY-WLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIA 118 (436)
Q Consensus 42 ~nGkp~~~~G~N~~-~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~ 118 (436)
.++.+..++|+|+- |+.. .+. ....+++|+.||++|+|+||+.+. |..+++ .|+.++++.++.||++|+
T Consensus 13 ~~~~~~~~~GvNlg~~~~~---~~~-~~~~~~d~~~i~~~G~n~vRi~i~----~~~~~~~~~p~~~~~~~~~~ld~~v~ 84 (341)
T 1vjz_A 13 MNNTIPRWRGFNLLEAFSI---KST-GNFKEEDFLWMAQWDFNFVRIPMC----HLLWSDRGNPFIIREDFFEKIDRVIF 84 (341)
T ss_dssp ----CCCCEEEECCTTSST---TCC-CCCCHHHHHHHHHTTCCEEEEEEE----GGGTSCSSCTTCCCGGGHHHHHHHHH
T ss_pred hcccccccceecccccccC---CCC-CCCCHHHHHHHHHcCCCEEEeeCC----HHHhcCCCCCCcCCHHHHHHHHHHHH
Confidence 45667788999973 3322 111 246789999999999999999653 223444 378899999999999999
Q ss_pred HHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEE
Q 013811 119 EARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIM 197 (436)
Q Consensus 119 ~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~ 197 (436)
+|.++||+|||++|+.... ++ ..+. .....+|.++..++.+.++++.|++| |+++ |+|+
T Consensus 85 ~a~~~Gi~vildlh~~pg~-----~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~r--------y~~~~~~v~ 144 (341)
T 1vjz_A 85 WGEKYGIHICISLHRAPGY-----SV-----NKEV--EEKTNLWKDETAQEAFIHHWSFIARR--------YKGISSTHL 144 (341)
T ss_dssp HHHHHTCEEEEEEEEETTE-----ES-----CTTS--CCSSCTTTCHHHHHHHHHHHHHHHHH--------HTTSCTTTE
T ss_pred HHHHcCCEEEEEecCCCCc-----cc-----ccCC--CccccccCCHHHHHHHHHHHHHHHHH--------HhcCCCCeE
Confidence 9999999999999873110 00 0111 01246888999999999999999999 9999 9999
Q ss_pred EEEeecCCCCCCCC--ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcce
Q 013811 198 AWELMNEPRCTSDP--SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDF 275 (436)
Q Consensus 198 ~weL~NEp~~~~~~--~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~ 275 (436)
+|+|+|||.+.... +.+.+.+++++++++||+.||+++|++++..+ +. .. + .... ....+
T Consensus 145 ~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~~-~~-~~--------------~-~~l~-~~n~v 206 (341)
T 1vjz_A 145 SFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGY-GN-IP--------------V-DDLT-IENTV 206 (341)
T ss_dssp EEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHH-HT-BC--------------C-TTCC-CSSEE
T ss_pred EEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCcC-Cc-cc--------------c-cccC-CCCeE
Confidence 99999999986421 23678899999999999999999999976432 21 10 0 0111 23348
Q ss_pred EEeecCCC--------CCCCC-----CChhH--------hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChH
Q 013811 276 ATVHSYPD--------QWLSS-----SNDRD--------QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTY 334 (436)
Q Consensus 276 ~s~H~Y~~--------~w~~~-----~~~~~--------~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~ 334 (436)
+++|.|.. .|... ...+. ....+.+.+....+ ..+ .++||+|||||..... +.+
T Consensus 207 ~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~-~~~-~g~Pv~igEfG~~~~~---~~~ 281 (341)
T 1vjz_A 207 QSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIK-LRQ-KGIEVFCGEMGAYNKT---PHD 281 (341)
T ss_dssp EEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHG-GGG-GTCEEEEEEECCCTTS---CHH
T ss_pred EEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHHH-HHH-hCCCeEEeccccccCC---ChH
Confidence 99999953 23321 00100 01222222332221 222 6899999999987652 345
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 335 QRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 335 ~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+..|++.+++.+.+ ...|+++|++.++
T Consensus 282 ~~~~~~~~~~~~~~~------~~~g~~~W~~~~~ 309 (341)
T 1vjz_A 282 VVLKWLEDLLEIFKT------LNIGFALWNFRGP 309 (341)
T ss_dssp HHHHHHHHHHHHHHH------TTCEEEESCSBST
T ss_pred HHHHHHHHHHHHHHH------cCCceEEEecCCC
Confidence 666777777665422 2469999999874
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-28 Score=247.67 Aligned_cols=256 Identities=17% Similarity=0.231 Sum_probs=174.6
Q ss_pred CCCCCEEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 28 AGDGFIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
+..++|+|+|++|+. ||+|++++|+|. ..... ....+++|+.||++|+|+||+++. ++ +.|+
T Consensus 5 ~~~~~l~v~G~~i~d~nG~~v~lrGvN~-~~~W~------~~~~~~di~~ik~~G~N~VRipv~-~g---------~~~~ 67 (464)
T 1wky_A 5 NANSGFYVSGTTLYDANGNPFVMRGINH-GHAWY------KDQATTAIEGIANTGANTVRIVLS-DG---------GQWT 67 (464)
T ss_dssp C--CCCEEETTEEECTTSCBCCCEEEEE-CGGGC------GGGHHHHHHHHHTTTCSEEEEEEC-CS---------SSSC
T ss_pred CCCCCeEEeCCEEECCCCCEEEEEEEEe-CcccC------CcchHHHHHHHHHCCCCEEEEEcC-CC---------CccC
Confidence 355789999999997 999999999995 22111 134678999999999999999553 21 1255
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
++.++.||++|++|.++||+|||++|+. .| +.++...+.+.+++++|++|
T Consensus 68 ~~~l~~ld~vv~~a~~~Gl~VIlDlH~~----~g---------------------~~~~~~~~~~~~~w~~iA~r----- 117 (464)
T 1wky_A 68 KDDIQTVRNLISLAEDNNLVAVLEVHDA----TG---------------------YDSIASLNRAVDYWIEMRSA----- 117 (464)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECTT----TT---------------------CCCHHHHHHHHHHHHHTGGG-----
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecCC----CC---------------------CCChHHHHHHHHHHHHHHHH-----
Confidence 6679999999999999999999999864 11 11235678899999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
|+++|..++|||+|||... .+.+.+.+++++++++||+.||+|+|+++...+ +... . ..-..+.++..
T Consensus 118 ---yk~~~~~Vi~eL~NEP~~~--~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w-~~~~-~-----~~~~~~~~l~~ 185 (464)
T 1wky_A 118 ---LIGKEDTVIINIANEWFGS--WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGW-GQFP-Q-----SIHDYGREVFN 185 (464)
T ss_dssp ---TTTCTTTEEEECCTTCCCS--SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTBT-H-----HHHHHHHHHHH
T ss_pred ---HcCCCCeEEEEeccCCCCC--CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCc-Cccc-c-----cccccchhccc
Confidence 9999443479999999874 234567788899999999999999999986543 1100 0 00000001111
Q ss_pred hcCCC-CcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 013811 267 NNLIP-GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYY 345 (436)
Q Consensus 267 ~~~~~-~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~ 345 (436)
..| ...++++|.|+.. +. . .++++.+++.+.+ .++||+|+|||........ .. +.+++
T Consensus 186 --~dp~~niv~s~H~Y~~~-g~--~--------~~~i~~~~~~~~~-~g~Pv~igEfG~~~~~~~~---~~----~~~~~ 244 (464)
T 1wky_A 186 --ADPQRNTMFSIHMYEYA-GG--N--------ASQVRTNIDRVLN-QDLALVIGEFGHRHTNGDV---DE----STIMS 244 (464)
T ss_dssp --TCTTCCEEEEEEESTTT-SS--S--------HHHHHHHHHHHHT-TTCCEEEEEECSEETTEEC---CH----HHHHH
T ss_pred --cCCCCCEEEEEEEECCC-CC--C--------HHHHHHHHHHHHH-cCCCEEEECccCCCCCCcH---HH----HHHHH
Confidence 111 3458999999632 11 1 1234455555554 7999999999998643111 11 22332
Q ss_pred HHHHHhhcCCCccceeecccccCC
Q 013811 346 KIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 346 ~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
. +++ ...|+++|+|.+.+
T Consensus 245 ~----~~~--~~igw~~W~~~~~~ 262 (464)
T 1wky_A 245 Y----SEQ--RGVGWLAWSWKGNG 262 (464)
T ss_dssp H----HHH--TTCEEEESCSSCCC
T ss_pred H----HHH--cCCeEEEEEEcCCC
Confidence 2 222 34799999999864
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=233.24 Aligned_cols=237 Identities=15% Similarity=0.202 Sum_probs=170.0
Q ss_pred hHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 69 KVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
..+++|+.||++|+|+||+.+. |..+++ .++.++++.++.+|++|+.|.++||+|||++|+.- .
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~----w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~----------~ 107 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIR----WSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE----------E 107 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCC----GGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCH----------H
T ss_pred CCHHHHHHHHHCCCCEEEEeee----hHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCc----------c
Confidence 4589999999999999999542 444543 45678999999999999999999999999998641 0
Q ss_pred HHhhcCCCCCCCCCCCCCh-HHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHH
Q 013811 147 WARSQGQFLTSDDDFFRNP-VVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS 225 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~-~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~ 225 (436)
++.++ ..++.+.+++++|++| |+++|+|++|+|+|||.... +.+.+.++++++++
T Consensus 108 --------------~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~vv~~~l~NEP~~~~--~~~~~~~~~~~~~~ 163 (320)
T 3nco_A 108 --------------LYQAPDKYGPVLVEIWKQVAQA--------FKDYPDKLFFEIFNEPAQNL--TPTKWNELYPKVLG 163 (320)
T ss_dssp --------------HHHCHHHHHHHHHHHHHHHHHH--------HTTSCTTEEEECCSCCCTTS--CHHHHHHHHHHHHH
T ss_pred --------------cccCcHHHHHHHHHHHHHHHHH--------HcCCCceEEEEeccCCCCCC--CHHHHHHHHHHHHH
Confidence 12344 5788999999999999 99999999999999999753 35678999999999
Q ss_pred HhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCC--------CCCCCCC-------
Q 013811 226 YVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPD--------QWLSSSN------- 290 (436)
Q Consensus 226 ~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~--------~w~~~~~------- 290 (436)
+||+.||+++|++|...+ +... . . ..+. ......+++++|.|.. .|.....
T Consensus 164 ~IR~~dp~~~i~v~~~~~-~~~~--~------~---~~~~--~~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~w~ 229 (320)
T 3nco_A 164 EIRKTNPSRIVIIDVPNW-SNYS--Y------V---RELK--LVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIGVKWE 229 (320)
T ss_dssp HHHHHCSSCCEEEECSGG-GBGG--G------G---GGCC--CCSCTTEEEEEEECCSHHHHTTTCTTSSSCCCSCCCCC
T ss_pred HHHhcCCCcEEEECCCCc-Cchh--H------H---hcCC--CCCCCCeEEEEEecCCeeeEeccccccCCCCCCCCCCC
Confidence 999999999999986433 1100 0 0 0000 0113456899999964 2322110
Q ss_pred -hhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 291 -DRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 291 -~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.+.....+.+.+....+.+.+ .++||+|+|||+.... +.+.|..|++.+.+.+.+ ...|+++|++.+
T Consensus 230 g~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~~------~gi~~~~W~~~~ 297 (320)
T 3nco_A 230 GKDWEVEQIRNHFKYVSEWAKK-NNVPIFLGEFGAYSKA---DMESRVKWTKTVRRIAEE------FGFSLAYWEFCA 297 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCSSG
T ss_pred CchhhHHHHHHHHHHHHHHHHH-cCCCEEEeeeeeecCC---CHHHHHHHHHHHHHHHHH------cCCeEEEEecCC
Confidence 001123333444444444554 7999999999987643 456788888877765433 347999999864
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-27 Score=247.51 Aligned_cols=287 Identities=16% Similarity=0.224 Sum_probs=197.3
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||+|++++|+|.|..........+.+.++++|+.||++|+|+||+... + .+
T Consensus 270 ~~G~R~v~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~di~l~k~~g~N~vR~~hy-----p--------~~ 336 (605)
T 3lpf_A 270 RVGIRSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHY-----P--------YA 336 (605)
T ss_dssp EECCCCEEEETTEEEETTEECCEEEEEECSCCTTTTTCCCHHHHHHHHHHHHHHTCCEEEECSS-----C--------CC
T ss_pred eeeeEEEEEcCCEEEECCEEEEEEeeecCcCcccccccCCHHHHHHHHHHHHHCCCcEEEecCC-----C--------Cc
Confidence 3465 8889999999999999999998765543322345678999999999999999999432 1 12
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCC-CCChhhhhhHHhhcCCCCCCCCCCC----CChHHHHHHHHHHHHHHhc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDS-FGGKKQYVNWARSQGQFLTSDDDFF----RNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~-~gg~~~y~~W~~~~G~~~~~~~~f~----~~~~~~~~~~~~v~~iv~r 181 (436)
++++++|.++||+|+.++...... ..|. .|. .+. .....| .+++.++.+.+.++++|+|
T Consensus 337 -------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~----~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~r 400 (605)
T 3lpf_A 337 -------EEMLDWADEHGIVVIDETAAVGFNLSLGI----GFE--AGN---KPKELYSEEAVNGETQQAHLQAIKELIAR 400 (605)
T ss_dssp -------HHHHHHHHHHTCEEEEECSCBCCCSSCCC----SCC--CCC---CCSCSSSTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhcCCEEEEecccccccccccc----ccc--ccc---CccccccccccCHHHHHHHHHHHHHHHHH
Confidence 478899999999999998642100 0000 000 000 111223 2678999999999999999
Q ss_pred cccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCccc
Q 013811 182 YNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIG 261 (436)
Q Consensus 182 ~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g 261 (436)
++|||+|++|.++||+.... +....++++|++.||++||+|||+.+...+... +
T Consensus 401 --------~~NHPSIi~Ws~gNE~~~~~----~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~-----------~--- 454 (605)
T 3lpf_A 401 --------DKNHPSVVMWSIANEPDTRP----QGAREYFAPLAEATRKLDPTRPITCVNVMFCDA-----------H--- 454 (605)
T ss_dssp --------HTTCTTEEEEEEEESCCCCS----TTHHHHHHHHHHHHHHHCSSSCEEEEEETTSCT-----------T---
T ss_pred --------cCCCCeEEEEecCccccccc----chHHHHHHHHHHHHHHHCCCCcEEEeccccCcc-----------c---
Confidence 99999999999999997542 235678999999999999999999764322110 0
Q ss_pred chhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-------CCCChH
Q 013811 262 TDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-------PGYSTY 334 (436)
Q Consensus 262 ~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-------~g~~~~ 334 (436)
.+...+.+|++++|.|..++......+. ..+++.+.+....+..+|||+++|||..... ..++++
T Consensus 455 ----~d~~~~~~Dvig~N~Y~gwY~~~g~~~~----~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~~~~~sEe 526 (605)
T 3lpf_A 455 ----TDTISDLFDVLCLNRYYGWYVQSGDLET----AEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEE 526 (605)
T ss_dssp ----TCSSGGGSSSEEEECCBTTTBSTTCHHH----HHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSSCCTTSHH
T ss_pred ----ccccccccceeeeccccccccCCCchHH----HHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCCCCCCCHH
Confidence 0112346899999999875433222222 2233333322212226999999999976432 236888
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCC--CC---CCCceEEeC
Q 013811 335 QRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD--AF---RDGYEIVLS 382 (436)
Q Consensus 335 ~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~--~~---~dg~~i~~~ 382 (436)
++..+++..+..+.+ ...+.|.++|.|.|.... .| .+..+++..
T Consensus 527 yq~~~~~~~~~~~~~----~~~~~G~~iW~~~Df~~~~~~~~~~~n~kGl~t~ 575 (605)
T 3lpf_A 527 YQCAWLDMYHRVFDR----VSAVVGEQVWNFADFATSQGILRVGGNKKGIFTR 575 (605)
T ss_dssp HHHHHHHHHHHHHTT----CTTEEEEEEEEEECBCBCCBTTBSSSBCCEEECT
T ss_pred HHHHHHHHHHHHHhc----CCcEEEEEEEEeeeecCccCCccccCCCCccccC
Confidence 898888877765432 347899999999997542 12 246788875
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-29 Score=247.34 Aligned_cols=272 Identities=14% Similarity=0.160 Sum_probs=176.7
Q ss_pred CCCCCEEeeCC-eEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCC
Q 013811 28 AGDGFIRTRGS-HFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGS 104 (436)
Q Consensus 28 ~~~~fv~v~g~-~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~ 104 (436)
.+.+||+|+|+ +|+. +|+|++++|+|.++..... ....+++|+.|+ ++|+|+||+++..+ ..+..
T Consensus 16 ~~~~~~~v~G~~~lvd~~G~~~~lrGvn~~~~~~~~-----~~~~~~d~~~l~~~~G~N~VRip~~~~-------~~~~~ 83 (364)
T 1g01_A 16 GALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFG-----EIVNENAFVALSNDWGSNMIRLAMYIG-------ENGYA 83 (364)
T ss_dssp CSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHTTSCCSEEEEEEESS-------SSSTT
T ss_pred CCCCcEEecCCeeEECCCCCEEEEEEEecCcccccC-----CccCHHHHHHHHHHCCCCEEEEEeeeC-------CCCCc
Confidence 35578999999 6775 8999999999987654321 123458899986 99999999966421 12345
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
++++.|+.||++|++|.++||+|||++|+.. .|+.+ ..+ .+.+.+++++|++|
T Consensus 84 ~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~--~g~~~----------------~~~------~~~~~~~w~~ia~~--- 136 (364)
T 1g01_A 84 TNPEVKDLVYEGIELAFEHDMYVIVDWHVHA--PGDPR----------------ADV------YSGAYDFFEEIADH--- 136 (364)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCEEEEEEECCS--SSCTT----------------SGG------GTTHHHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEeccCC--CCCCC----------------hHH------HHHHHHHHHHHHHH---
Confidence 7889999999999999999999999999742 12110 011 12467899999999
Q ss_pred ccccccC---CCCcEEEEEeecCCCCCCC-----C-Ch---HHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccc
Q 013811 185 FTGIHYK---DDPTIMAWELMNEPRCTSD-----P-SG---RTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRK 252 (436)
Q Consensus 185 ~tg~~yk---~~p~I~~weL~NEp~~~~~-----~-~~---~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~ 252 (436)
|+ ++|+|+ |+|+|||.+... . +. +.+..++++++++||+.| +|+|++|..++ +...
T Consensus 137 -----y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v~~~~w-~~~~---- 204 (364)
T 1g01_A 137 -----YKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILVGNPNW-SQRP---- 204 (364)
T ss_dssp -----HTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCHHH-HTCH----
T ss_pred -----hhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCCc-cccc----
Confidence 99 789997 999999987521 0 12 346778999999999999 99999986543 2110
Q ss_pred cCCCCCcccchhhhh-cCCCCcceEEeecCCCCCCCC-CChhH-hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC
Q 013811 253 RVNPNLDIGTDFVAN-NLIPGIDFATVHSYPDQWLSS-SNDRD-QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329 (436)
Q Consensus 253 ~~np~~~~g~df~~~-~~~~~iD~~s~H~Y~~~w~~~-~~~~~-~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~ 329 (436)
++... .......++++|.|+...... ...+. ......+.+..+++.+.+ .++||+|+|||.....+
T Consensus 205 ----------~~~~~~p~~~~niv~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~ 273 (364)
T 1g01_A 205 ----------DLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALD-NGVAVFATEWGTSQANG 273 (364)
T ss_dssp ----------HHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHHHHHHHHHH-TTCCEEEEEEESSBTTT
T ss_pred ----------chhhcCCCCCCCEEEEEEecCCccCCCCCCCCCCchHHHHHHHHHHHHHHHH-CCCeEEEEccccccCCC
Confidence 11110 011233488999998643211 00100 000011223344445554 79999999999976432
Q ss_pred CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 330 GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 330 g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.... . .++++.+++.+ ++ ..+|+++|+|.+..
T Consensus 274 ~~~~-~-~~~~~~~~~~~----~~--~~ig~~~W~~~~~~ 305 (364)
T 1g01_A 274 DGGP-Y-FDEADVWLNFL----NK--HNISWANWSLTNKN 305 (364)
T ss_dssp BSCC-C-HHHHHHHHHHH----HH--TTCCEEEEEECCSS
T ss_pred CCCc-C-HHHHHHHHHHH----HH--CCCceEEEeCCCCC
Confidence 1111 1 12333344322 22 24799999998853
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-27 Score=248.62 Aligned_cols=275 Identities=18% Similarity=0.247 Sum_probs=190.1
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||+|++++|+|.|..........+.+.++++|+.||++|+|+||+... + .+
T Consensus 303 ~~G~R~i~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~h~-----p--------~~ 369 (613)
T 3hn3_A 303 PVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHY-----P--------YA 369 (613)
T ss_dssp EECCCCEEECSSCEEETTEEECEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTTS-----C--------CC
T ss_pred ccCceEEEEECCEEEECCEEeeeceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEccCC-----C--------Ch
Confidence 3465 8888999999999999999998754433222235688999999999999999998332 1 12
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.++++|.++||+|+.+++.... .+ ..++ ++...+.+.+.+++++.|
T Consensus 370 -------~~~~~~cD~~Gi~V~~e~~~~~~------~~--------------~~~~-~~~~~~~~~~~~~~~v~r----- 416 (613)
T 3hn3_A 370 -------EEVMQMCDRYGIVVIDECPGVGL------AL--------------PQFF-NNVSLHHHMQVMEEVVRR----- 416 (613)
T ss_dssp -------HHHHHHHHHHTCEEEEECSCBCC------CS--------------GGGC-CHHHHHHHHHHHHHHHHH-----
T ss_pred -------HHHHHHHHHCCCEEEEecccccc------cc--------------cccc-ChHHHHHHHHHHHHHHHH-----
Confidence 37889999999999999764210 01 1122 466778899999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
++|||+|++|+++|||.... +....+++++++.||++||+|+|+.++.+-+. .
T Consensus 417 ---~~nhPSIi~W~~~NE~~~~~----~~~~~~~~~l~~~~k~~DptRpv~~~~~~~~~--------------------~ 469 (613)
T 3hn3_A 417 ---DKNHPAVVMWSVANEPASHL----ESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYA--------------------A 469 (613)
T ss_dssp ---HTTCTTEEEEEEEESCCTTS----HHHHHHHHHHHHHHHHHCTTSCEEEEECSCTT--------------------T
T ss_pred ---hCCCCeEEEEecccCccccc----chHHHHHHHHHHHHHHhCCCCCEEEEcccCcc--------------------c
Confidence 99999999999999998642 34778999999999999999999985422110 0
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-------CCCChHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-------PGYSTYQRDVM 339 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-------~g~~~~~r~~~ 339 (436)
....+.+|++++|.|+.++......+.. .............+ .+||++++|||..... ..+++++|..+
T Consensus 470 ~~~~~~~Dv~~~n~Y~~wy~~~~~~~~~---~~~l~~~~~~~~~~-~~kPi~isE~G~~~~~g~~~~~~~~~seeyQ~~~ 545 (613)
T 3hn3_A 470 DKGAPYVDVICLNSYYSWYHDYGHLELI---QLQLATQFENWYKK-YQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSL 545 (613)
T ss_dssp CSSGGGCSSEEEECCBTTTBSTTCGGGH---HHHHHHHHHHHHHH-HCSCEEEEECCCCBCTTCCCSSCCTBSHHHHHHH
T ss_pred cccccccceeEEeccccccCCCccHHHH---HHHHHHHHHHHHHh-cCCCEEEEeeCCCCCCCcccCCCCCCCHHHHHHH
Confidence 1123457999999999855432222211 11111121111222 6999999999997532 12467888888
Q ss_pred HHHHHHHHHHHhhcCCCccceeecccccCCCC--CCC---CCceEEeC
Q 013811 340 FNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD--AFR---DGYEIVLS 382 (436)
Q Consensus 340 ~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~--~~~---dg~~i~~~ 382 (436)
++..+..+-+. .. ..++|+++|++.|.... .+. +-++++..
T Consensus 546 ~~~~~~~~~~~-~~-~~~~G~~~W~~~Df~~~~~~~~~~~n~kGl~~~ 591 (613)
T 3hn3_A 546 LEQYHLGLDQK-RR-KYVVGELIWNFADFMTEQSPTRVLGNKKGIFTR 591 (613)
T ss_dssp HHHHHHHHHTT-TT-TTEEEEEESCSBCBCCCCBTTBSSSBCCCSBCT
T ss_pred HHHHHHHHHhh-cc-cceEEEEEEEeeecccccCCCcCCCCcCceECC
Confidence 88766544222 22 36899999999997542 121 34666653
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=229.30 Aligned_cols=250 Identities=12% Similarity=0.119 Sum_probs=168.1
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHH
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWA 148 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 148 (436)
+++|+.||++|+|+||+.+. |..+++ .+|.++++.++.||++|++|.++||+|||++|+.-. |.
T Consensus 34 ~~di~~~~~~G~n~vRi~i~----w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~----------~~ 99 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFM----MERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGR----------YY 99 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEEC----HHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTE----------ET
T ss_pred HHHHHHHHHCCCCEEEeccc----HHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEecccccc----------cc
Confidence 78999999999999999542 444555 367899999999999999999999999999997411 11
Q ss_pred hhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhh
Q 013811 149 RSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVK 228 (436)
Q Consensus 149 ~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir 228 (436)
|. ...+ ++.+.++++.|++| |+++|.| +|+|+|||.+. +.+.+..++++++++||
T Consensus 100 ---g~-------~~~~---~~~~~~~~~~ia~~--------~~~~~~V-~~~l~NEP~~~---~~~~w~~~~~~~~~~IR 154 (305)
T 1h1n_A 100 ---NS-------IISS---PSDFETFWKTVASQ--------FASNPLV-IFDTDNEYHDM---DQTLVLNLNQAAIDGIR 154 (305)
T ss_dssp ---TE-------ECCC---HHHHHHHHHHHHHT--------STTCTTE-EEECCSCCCSS---CHHHHHHHHHHHHHHHH
T ss_pred ---CC-------cCCc---HHHHHHHHHHHHHH--------hCCCCeE-EEeccCCCCCC---CHHHHHHHHHHHHHHHH
Confidence 10 0112 67899999999999 9999999 99999999986 35678899999999999
Q ss_pred ccCC-CCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCC-CcceEEeecCCCCCCCCCChh-HhHHHHHHHHHHH
Q 013811 229 SIDR-NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP-GIDFATVHSYPDQWLSSSNDR-DQLSFLNNWLDTH 305 (436)
Q Consensus 229 ~~Dp-~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~-~iD~~s~H~Y~~~w~~~~~~~-~~~~~~~~~i~~~ 305 (436)
+.|| +++|.+++.++-.... |....+.......| +..++++|.|+..+....... .......+.+...
T Consensus 155 ~~~~~~~~I~v~g~~~~~~~~---------~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~~~~~~~~~~~ 225 (305)
T 1h1n_A 155 SAGATSQYIFVEGNSWTGAWT---------WTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQERITSA 225 (305)
T ss_dssp HTTCCSSCEEEECTGGGBSTT---------HHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCTTHHHHHHHHH
T ss_pred hcCCCccEEEEccccccCccc---------ccccCcccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCcchHHHHHHHH
Confidence 9999 9999997655421100 00000001111112 244889999986543211000 0001223344555
Q ss_pred HHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcC-CCccceeecccccCCCCCCCC-CceEEeCC
Q 013811 306 IQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRG-GAAAGGLFWQLLTEGMDAFRD-GYEIVLSQ 383 (436)
Q Consensus 306 ~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~-~~~~G~~~W~~~~~g~~~~~d-g~~i~~~~ 383 (436)
.+.+.+ .++||+|||||...+ ..+..+++.+++. +++. ....|+++|++++. |++ .|++.+.+
T Consensus 226 ~~~~~~-~g~Pv~igEfG~~~~------~~~~~~~~~~~~~----~~~~~~~~ig~~~W~~g~~----~~~y~~~~~~~~ 290 (305)
T 1h1n_A 226 TQWLRA-NGKKGIIGEFAGGAD------NVCETAITGMLDY----MAQNTDVWTGAIWWAAGPW----WGDYIFSMEPDN 290 (305)
T ss_dssp HHHHHH-TTCCEEEEEEECCSS------HHHHHHHHHHHHH----HHTCTTTEEEEEEEEECTT----CTTCTTCCCTTT
T ss_pred HHHHHH-cCCcEEEEeccCCCC------hHHHHHHHHHHHH----HHHcCCeeEEEEEECCCCC----CCCCeeeEECCC
Confidence 545554 799999999998742 3455666666543 3321 22379999998764 222 36666643
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-27 Score=235.54 Aligned_cols=274 Identities=15% Similarity=0.199 Sum_probs=170.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCC-CCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYR-PLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~-~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
...+++|+.||++|+|+||+++. |. .+++ .++.++++.++.||++|+.|.++||+|||++|+. .++. ...
T Consensus 69 ~~~~~d~~~l~~~G~n~vRl~i~----w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~--~~~~--~~g 140 (395)
T 2jep_A 69 TVTPELIKKVKAAGFKSIRIPVS----YLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD--GYNS--VQG 140 (395)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCC----CGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG--GCTT--STT
T ss_pred cCcHHHHHHHHHcCCCEEEEeee----eccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc--cccC--CCC
Confidence 34778999999999999999653 31 2444 4678999999999999999999999999999974 1110 001
Q ss_pred hHHhhcCCCCCCCCCCCCC-hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--CCh---HHHHHH
Q 013811 146 NWARSQGQFLTSDDDFFRN-PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--PSG---RTIQAW 219 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--~~~---~~~~~w 219 (436)
.|.. .+ ..+ +..++.+.++++.|++| |+++|+|++|+|+|||.+... ++. +.+.+|
T Consensus 141 ~w~~---------~~-~~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~ 202 (395)
T 2jep_A 141 GWLL---------VN-GGNQTAIKEKYKKVWQQIATK--------FSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAY 202 (395)
T ss_dssp CCCC---------TT-CSCHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHH
T ss_pred cccc---------CC-cccHHHHHHHHHHHHHHHHHH--------hCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHH
Confidence 1110 00 112 45789999999999999 999999999999999987431 112 468889
Q ss_pred HHHHHHHhhcc---CCCCEEEeCCCcccCCCCCccc-cC-CCCCcccchhhhhcCCCCcceEEeecCCC-----------
Q 013811 220 ITEMASYVKSI---DRNHLLEAGLEGFYGQSTPQRK-RV-NPNLDIGTDFVANNLIPGIDFATVHSYPD----------- 283 (436)
Q Consensus 220 ~~~~~~~Ir~~---Dp~~lV~vG~~g~~~~~~~~~~-~~-np~~~~g~df~~~~~~~~iD~~s~H~Y~~----------- 283 (436)
+++++++||+. ||+|+|.+++... +....... .. .|.-..+ .+.. .....-.++++|.|+.
T Consensus 203 ~~~~~~aIR~~~~~np~~~I~v~g~~~-~~~~~~~~~~~~~p~d~~~-~~~i-~~~~~~~v~s~H~Y~~~~~~~~~~~~~ 279 (395)
T 2jep_A 203 NQIFVDTVRQTGGNNNARWLLVPGWNT-NIDYTVGNYGFTLPTDNYR-SSAI-PSSQKRIMISAHYYSPWDFAGEENGNI 279 (395)
T ss_dssp HHHHHHHHHTSSGGGGTSCEEEECGGG-CHHHHHSSSSCCCCCCTTS-CTTS-CTTCCCEEEEEEECCSHHHHTCSSSSC
T ss_pred HHHHHHHHHHhCCCCCCcEEEECCCcc-CcccccccccccCCCCccc-cccC-CCCCCCEEEEEEecCCccccCcccccc
Confidence 99999999999 5689999865221 00000000 00 0100000 0000 0001233899999985
Q ss_pred -CCCCCCChhH------hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC--CCChHHHHHHHHHHHHHHHHHhhcC
Q 013811 284 -QWLSSSNDRD------QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP--GYSTYQRDVMFNTVYYKIYSSAKRG 354 (436)
Q Consensus 284 -~w~~~~~~~~------~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~--g~~~~~r~~~~~~~~~~i~~~~~~~ 354 (436)
.|+.....+. ....+...+......+.+ .++||+|||||.....+ ..+.+.+..|++.+++.+.+
T Consensus 280 ~~W~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 353 (395)
T 2jep_A 280 TQWGATSTNPAKKSTWGQEDYLESQFKSMYDKFVT-QGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKK----- 353 (395)
T ss_dssp CBCSTTCSCGGGBCSSCSHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHH-----
T ss_pred cccccccCCcccccccCcHHHHHHHHHHHHHHHHH-cCCCEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHH-----
Confidence 3433111010 002222233333333333 68999999999986542 12345666777776664433
Q ss_pred CCccceeecccccCCCCCCCCCceEEe
Q 013811 355 GAAAGGLFWQLLTEGMDAFRDGYEIVL 381 (436)
Q Consensus 355 ~~~~G~~~W~~~~~g~~~~~dg~~i~~ 381 (436)
...|+++|++.+.+. ++|+++.
T Consensus 354 -~~i~~~~W~~~~~~~----~~~gl~~ 375 (395)
T 2jep_A 354 -YKMVPVYWDNGHNGQ----HGFALFN 375 (395)
T ss_dssp -TTCEEEEEECSCCST----TCCCSEE
T ss_pred -CCCeEEEECCCCCCC----CCcceee
Confidence 247999999987632 3455554
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-26 Score=234.74 Aligned_cols=271 Identities=16% Similarity=0.201 Sum_probs=174.9
Q ss_pred CCCEEeeCCeEEE--CCeEEEEEeecccc-----ccccc--------CCc-chhhhHHHHHHHHHHCCCCEEEEccccCC
Q 013811 30 DGFIRTRGSHFLL--NGNLYFANGFNAYW-----LMYVA--------SDP-SQRSKVSTAFHEAASHGLTVARTWAFSDG 93 (436)
Q Consensus 30 ~~fv~v~g~~f~~--nGkp~~~~G~N~~~-----~~~~~--------~~~-~~~~~~~~~l~~l~~~G~N~vRi~~~~d~ 93 (436)
...|+|+|++|++ ||+||+++|+|+|. .+..+ .++ .+++.+++|++.||++|+|+||+|..
T Consensus 33 ~r~I~VkG~~f~~~~NG~~f~lkGVny~p~~~~~~~~~G~~~~~~~~~d~l~~~e~~~rDi~LmK~~GiN~VRvy~~--- 109 (555)
T 2w61_A 33 TPAIKIVGNKFFDSESGEQFFIKGIAYQLQRSEEELSNANGAFETSYIDALADPKICLRDIPFLKMLGVNTLRVYAI--- 109 (555)
T ss_dssp SCCEEEETTEEEETTTCCBCCEEEEECCCCCC------CTTTTCCSSCCGGGCHHHHHHHHHHHHHHTCSEEEECCC---
T ss_pred CceEEEECCEEEECCCCeEEEEEEEECCCcccccccccCCccccccccccCCCHHHHHHHHHHHHHcCCCEEEEecc---
Confidence 3459999999999 99999999999876 21101 122 35789999999999999999999742
Q ss_pred CCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHH
Q 013811 94 GYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKN 173 (436)
Q Consensus 94 ~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~ 173 (436)
+|..+. |+++++|.++||+||+++++.-. .. ...+|...+.+.+
T Consensus 110 -----~P~~~~---------d~~ldl~~~~GIyVIle~~~p~~---~i-------------------~~~~P~~~~~~~~ 153 (555)
T 2w61_A 110 -----DPTKSH---------DICMEALSAEGMYVLLDLSEPDI---SI-------------------NRENPSWDVHIFE 153 (555)
T ss_dssp -----CTTSCC---------HHHHHHHHHTTCEEEEESCBTTB---SC-------------------CTTSCCCCHHHHH
T ss_pred -----CCCCCh---------HHHHHHHHhcCCEEEEeCCCCCc---cc-------------------ccCCHHHHHHHHH
Confidence 122221 78899999999999999865310 00 0134555667788
Q ss_pred HHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC--ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCcc
Q 013811 174 LIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQR 251 (436)
Q Consensus 174 ~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~ 251 (436)
+++.+|+| |++||+|++|.++||+...... ....+.+-++++.++||+.|+.+ |.||.+.. ...
T Consensus 154 r~~~~V~r--------y~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~-IpVgy~~a---d~~-- 219 (555)
T 2w61_A 154 RYKSVIDA--------MSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRK-IPVGYSTN---DDA-- 219 (555)
T ss_dssp HHHHHHHH--------HTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCC-CCEEEEEC---CCT--
T ss_pred HHHHHHHH--------cCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCc-ceeecccc---ccc--
Confidence 99999999 9999999999999999874321 12345666788999999998654 55554431 000
Q ss_pred ccCCCCCc-ccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC
Q 013811 252 KRVNPNLD-IGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG 330 (436)
Q Consensus 252 ~~~np~~~-~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g 330 (436)
.+. ...+|... ..+.+||+++|+|+ |.....+.. ..+.+..+.+.+ .+|||+++|||.....++
T Consensus 220 -----~~r~~la~yl~c-~~~~~D~~~~N~Y~--w~g~s~f~~------sg~~~~~~~~~~-~~~Pi~vsEyG~~~~~pg 284 (555)
T 2w61_A 220 -----MTRDNLARYFVC-GDVKADFYGINMYE--WCGYSTYGT------SGYRERTKEFEG-YPIPVFFSEFGCNLVRPR 284 (555)
T ss_dssp -----TTHHHHHHHTTB-TTCCCSCEEEEECC--CCSSCCHHH------HSHHHHHHHHTT-CSSCEEEEEECCCSSSSC
T ss_pred -----hhhHHHHHHhcc-CCCCcCEEEEeCCc--ccccccccc------hhHHHHHHHhhC-CCCCEEEEeCCCccCCCC
Confidence 000 00011110 03679999999997 543222221 111222223333 689999999999886555
Q ss_pred CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCCceEEeCC
Q 013811 331 YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQ 383 (436)
Q Consensus 331 ~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~~~ 383 (436)
.-.+..+.|.+. +. ....|.++|.|.++. ..|+++..+
T Consensus 285 ~~~E~~a~y~~~--------m~--~~~sGG~Ife~~dE~-----nnyGLv~~d 322 (555)
T 2w61_A 285 PFTEVSALYGNK--------MS--SVWSGGLAYMYFEEE-----NEYGVVKIN 322 (555)
T ss_dssp CCTHHHHHTSHH--------HH--TTCCEEEESCSBCCT-----TCCCSEEEC
T ss_pred chHHHHHHHhhc--------cc--ccccceEEEEEeccc-----CCccceeec
Confidence 333333332221 11 146788999999962 235566543
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-25 Score=219.64 Aligned_cols=260 Identities=13% Similarity=0.148 Sum_probs=174.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
...+++|+.|+++|+|+||+.+. |..+.+. ++.++++.++.||++|+.|.++||+|||+||+.- |
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi~----w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~----~----- 108 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPVT----WDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHEN----E----- 108 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCC----CTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCT----T-----
T ss_pred CCcHHHHHHHHHCCCCEEEEeee----hHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCcc----c-----
Confidence 45689999999999999999653 5445443 6789999999999999999999999999999751 1
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---C---C---hHHH
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---P---S---GRTI 216 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---~---~---~~~~ 216 (436)
|. ...++..+..++.+.++++.|++| |+++|.+++|+|+|||..... . + .+.+
T Consensus 109 -w~---------~~~~~~~~~~~~~~~~~w~~iA~~--------y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l 170 (345)
T 3ndz_A 109 -WL---------KPFYANEAQVKAQLTKVWTQIANN--------FKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVV 170 (345)
T ss_dssp -TC---------CCSTTTHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHH
T ss_pred -cc---------cccccchHHHHHHHHHHHHHHHHH--------HcCCCCceEEEeccCCCCCCcccccCCCCchhHHHH
Confidence 21 012455677899999999999999 999988889999999997521 1 1 2467
Q ss_pred HHHHHHHHHHhhcc---CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCC-C-----CC
Q 013811 217 QAWITEMASYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQ-W-----LS 287 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~---Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~-w-----~~ 287 (436)
.+++++++++||+. ||+|+|.+++..+ +.... .-..+..... ..-.++++|.|... + +.
T Consensus 171 ~~~~~~~i~aIR~~g~~np~~~Iiv~g~~~-~~~~~----------~~~~~~~P~~-~~n~v~s~H~Y~p~~f~~~~~g~ 238 (345)
T 3ndz_A 171 NRYNLTAVNAIRATGGNNATRYIMVPTLAA-SAMST----------TINDLVIPNN-DSKVIVSLHMYSPYFFAMDINGT 238 (345)
T ss_dssp HHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CCSHH----------HHHHCCCGGG-CTTEEEEEECCCSHHHHTCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCCcEEEECCCcc-Ccccc----------hhhcccCCCC-CCcEEEEEEecCchhcccCCCCC
Confidence 78999999999999 7889999976433 11100 0001110001 23348899999641 0 00
Q ss_pred -CCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccc
Q 013811 288 -SSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLL 366 (436)
Q Consensus 288 -~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~ 366 (436)
....+.....+.+.+....+.+.+ .++||+|||||..... +.+.|..|++.+.+.. ++ ...|+++|+++
T Consensus 239 ~~w~~~~~~~~~~~~~~~~~~~~~~-~g~pv~iGEfG~~~~~---~~~~~~~~~~~~~~~~----~~--~gi~~~~W~~g 308 (345)
T 3ndz_A 239 SSWGSDYDKSSLDSEFDAVYNKFVK-NGRAVVIGEMGSINKN---NTAARVTHAEYYAKSA----KA--RGLTPIWWDNG 308 (345)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHH----HT--TTCEEEEEECS
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHH-cCCcEEEEeecCCCCC---CHHHHHHHHHHHHHHH----HH--CCCeEEEECCC
Confidence 000011112222223333333333 6899999999997653 4566777877766543 22 45799999998
Q ss_pred cCCCCCCCCCceEEe
Q 013811 367 TEGMDAFRDGYEIVL 381 (436)
Q Consensus 367 ~~g~~~~~dg~~i~~ 381 (436)
.... .-+++|+++-
T Consensus 309 ~~~~-~~~~~fG~~d 322 (345)
T 3ndz_A 309 YSVA-GKAETFGIFN 322 (345)
T ss_dssp CCCT-TSTTCCCCEE
T ss_pred CCCC-CCCcccceEE
Confidence 6421 1135677764
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-25 Score=236.77 Aligned_cols=251 Identities=13% Similarity=0.166 Sum_probs=180.0
Q ss_pred CCCC--EEee-CCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCC
Q 013811 29 GDGF--IRTR-GSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSY 105 (436)
Q Consensus 29 ~~~f--v~v~-g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~ 105 (436)
..|| |+++ +..|.+||+|++++|+|.|..........+++.++++|+.||++|+|+||++... .
T Consensus 276 ~~GfR~ie~~~~~~f~lNG~~i~l~G~n~h~~~~~~G~~~~~e~~~~dl~l~k~~G~N~iR~~h~p-------------~ 342 (692)
T 3fn9_A 276 PLGVRKYEIVAGKGFFLNGEKYSMYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRFAHYQ-------------Q 342 (692)
T ss_dssp EECCCCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEETTSC-------------C
T ss_pred EecceEEEEECCCceEECCeeeeeeccccCCCcccccccccHHHHHHHHHHHHHCCCCEEEecCCC-------------C
Confidence 3465 7887 5689999999999999987543321223356889999999999999999996431 1
Q ss_pred ChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 106 NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 106 ~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
+ ++++++|.++||+|+.++...+ .+.+|. .+.+.+.++.++.|
T Consensus 343 ~-------~~~~dlcDe~Gi~V~~E~~~~~-------------------------~~~~~~-~~~~~~~~~~~v~r---- 385 (692)
T 3fn9_A 343 S-------DYLYSRCDTLGLIIWAEIPCVN-------------------------RVTGYE-TENAQSQLRELIRQ---- 385 (692)
T ss_dssp C-------HHHHHHHHHHTCEEEEECCCBS-------------------------CCCSSC-HHHHHHHHHHHHHH----
T ss_pred c-------HHHHHHHHHCCCEEEEcccccC-------------------------CCCCHH-HHHHHHHHHHHHHH----
Confidence 1 5889999999999988864210 023455 77888999999999
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~ 265 (436)
++|||+|++|.++||+... ++...+++++|.+.+|++||+++|+.++... .. .
T Consensus 386 ----~rNHPSIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~-~~-~----------------- 438 (692)
T 3fn9_A 386 ----SFNHPSIYVWGLHNEVYQP----HEYTAALTRSLHDLAKTEDPDRYTVSVNGYG-HM-D----------------- 438 (692)
T ss_dssp ----HTTCTTEEEEEEEESCCSS----HHHHHHHHHHHHHHHHHHCTTSEEEEEESSS-CT-T-----------------
T ss_pred ----hcCCCcceEEEeccccCcc----cccHHHHHHHHHHHHHHHCCCCCEEEeCCCc-cc-c-----------------
Confidence 9999999999999999863 3556789999999999999999999876321 00 0
Q ss_pred hhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-------------CC--
Q 013811 266 ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-------------PG-- 330 (436)
Q Consensus 266 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-------------~g-- 330 (436)
.......|++++|.|+.++... .+. +..|+.... +...+||++++|||..... .+
T Consensus 439 -~~~~~~~Dv~~~n~Y~gWY~~~--~~~----~~~~~~~~~---~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~~~~~ 508 (692)
T 3fn9_A 439 -HPVNLNADIQGMNRYFGWYEKK--IQD----IKPWVEQLE---KDYPYQKLMLTEYGADANLAHQTEYLGDALNWGKPF 508 (692)
T ss_dssp -CTTCSSSSEEEEECCBTTTBSC--GGG----HHHHHHHHH---HHCTTCCEEEEECCCCCBTTCCCSCCCSCCCSSSSC
T ss_pred -ccccccCCcccccccccccCCc--hHH----HHHHHHHHH---HHhcCccEEEEEEcCCcccccccccccccccccCCC
Confidence 0012468999999998733222 111 223333221 1125899999999985221 11
Q ss_pred CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCC
Q 013811 331 YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 331 ~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~ 370 (436)
++++.+..+++..++.+. +.+.++|.++|++.|.+.
T Consensus 509 ~see~Q~~~~~~~~~~~~----~~p~~~G~fvW~~~D~~~ 544 (692)
T 3fn9_A 509 YPETFQTKTHEYQWSIIK----DHPYIIASYLWNMFDFAV 544 (692)
T ss_dssp CBHHHHHHHHHHHHHHHH----HCTTSCEEEESCSBCEEE
T ss_pred CCHHHHHHHHHHHHHHHh----cCCCeEEEEEEEeeecCC
Confidence 466667777776666543 345789999999999764
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-25 Score=238.03 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=179.5
Q ss_pred CCCC--EEee-CCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCC
Q 013811 29 GDGF--IRTR-GSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSY 105 (436)
Q Consensus 29 ~~~f--v~v~-g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~ 105 (436)
..|| |+++ ++.|.+||||++++|+|.+..........+++.++++|+.||++|+|+||++... .
T Consensus 262 ~~G~R~i~~~~~~~f~lNGk~~~l~G~n~h~~~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~h~p-------------~ 328 (667)
T 3cmg_A 262 PLGLRYYHTDPDKGFFLNGKHLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLAHYP-------------Q 328 (667)
T ss_dssp EECCCCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEETTSC-------------C
T ss_pred eeeeEEEEEeCCCcEEECCEEEEEEEEEcCcCccccccCCCHHHHHHHHHHHHHCCCCEEEecCCC-------------C
Confidence 3465 7777 6789999999999999986543221122356899999999999999999996421 1
Q ss_pred ChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 106 NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 106 ~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
+ +.++++|.++||+|+..+.... .+| | ....+..++...+.+++.++.+|+|
T Consensus 329 ~-------~~~~~~cD~~Gl~V~~e~~~~~--~~~------~---------~~~~~~~~~~~~~~~~~~~~~~v~r---- 380 (667)
T 3cmg_A 329 A-------TYMYDLMDKHGIVTWAEIPFVG--PGG------Y---------ADKGFVDQASFRENGKQQLIELIRQ---- 380 (667)
T ss_dssp C-------HHHHHHHHHHTCEEEEECCCBC--CTT------S---------SSCSCCCSHHHHHHHHHHHHHHHHH----
T ss_pred C-------HHHHHHHHHCCCEEEEcccccC--cCc------c---------ccccccCCHHHHHHHHHHHHHHHHH----
Confidence 1 4788999999999999875321 111 1 0123456788899999999999999
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~ 265 (436)
++|||+|++|.++||+.... +....++++|.+.||++||+++|+.++. + . . .+
T Consensus 381 ----~rNHPSIi~W~~gNE~~~~~----~~~~~~~~~l~~~vk~~DptRpvt~~~~-~-~--~--------------~~- 433 (667)
T 3cmg_A 381 ----HYNHPSICFWGLFNELKEVG----DNPVEYVKELNALAKQEDPTRPTTSASN-Q-D--G--------------NL- 433 (667)
T ss_dssp ----HTTCTTEEEEEEEESCCSSS----SCCHHHHHHHHHHHHHHCTTSCEEEEEC-C-C--S--------------GG-
T ss_pred ----cCCCCEEEEEecccCCCccc----hhHHHHHHHHHHHHHHHCCCCcEEEeCC-C-C--C--------------cc-
Confidence 99999999999999997642 2246788999999999999999998752 1 0 0 00
Q ss_pred hhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-----------C-C--C
Q 013811 266 ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-----------P-G--Y 331 (436)
Q Consensus 266 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-----------~-g--~ 331 (436)
.+..|++++|.|+. |..... ..+..|+.+.. +...+||++++|||..... . + .
T Consensus 434 ----~~~~Dv~~~n~Y~~-wy~~~~-----~~~~~~~~~~~---~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~~~ 500 (667)
T 3cmg_A 434 ----NFITENIAWNRYDG-WYGSTP-----KTLATFLDRTH---KKHPELRIGISEYGAGASIYHQQDSLKQPSASGWWH 500 (667)
T ss_dssp ----GGSSSSEEEECCTT-TSSSCT-----HHHHHHHHHHH---HHCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSSCC
T ss_pred ----ccccCEEEeccccc-cccCch-----hhhHHHHHHHH---HHCCCCcEEEEEECCCCCcccccccccccccccccC
Confidence 24579999999998 432211 12233443332 1125899999999975421 0 1 2
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 332 STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 332 ~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+++.+..++...++. +++.+.++|.++|++.|..
T Consensus 501 ~e~~q~~~~~~~~~~----~~~~~~~~G~fvW~~~D~~ 534 (667)
T 3cmg_A 501 PENWQTYYHMENWKI----IAERPFVWGTFVWNMFDFG 534 (667)
T ss_dssp BHHHHHHHHHHHHHH----HHTCTTCCCEEESCSBCEE
T ss_pred cHHHHHHHHHHHHHH----HhcCCCcEEEEEeeeeccC
Confidence 344555555555443 3444678999999999864
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-25 Score=222.12 Aligned_cols=256 Identities=19% Similarity=0.224 Sum_probs=171.1
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCC-CCChh-hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHH
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPG-SYNEQ-MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWA 148 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg-~~~~~-~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 148 (436)
+++|+.||++|+|+||+.+. |..+++.+| .|... .++.||++|+.|+++||+|||++|.......|.+
T Consensus 76 e~d~~~i~~~G~N~VRipi~----~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~------ 145 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIG----YWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFD------ 145 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCG------
T ss_pred HHHHHHHHHCCCCEEEccCC----HHHcccCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCcc------
Confidence 78999999999999999653 223333333 25544 8999999999999999999999997421111111
Q ss_pred hhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC---CcEEEEEeecCCCCCCCCChHHHH-HHHHHHH
Q 013811 149 RSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD---PTIMAWELMNEPRCTSDPSGRTIQ-AWITEMA 224 (436)
Q Consensus 149 ~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~---p~I~~weL~NEp~~~~~~~~~~~~-~w~~~~~ 224 (436)
..|. ....+|.++..++.+.++++.|++| |+++ |+|++|+|+|||.+.. .+.+.+. +|+++++
T Consensus 146 -~sG~---~~~~~w~~~~~~~~~~~~w~~ia~r--------y~~~~y~~~Vi~~el~NEP~~~~-~~~~~~~~~~~~~~~ 212 (408)
T 1h4p_A 146 -NSGL---RDSYKFLEDSNLAVTINVLNYILKK--------YSAEEYLDIVIGIELINEPLGPV-LDMDKMKNDYLAPAY 212 (408)
T ss_dssp -GGSS---TTCCCTTSHHHHHHHHHHHHHHHHH--------TTSHHHHTTEEEEESCSCCCGGG-SCHHHHHHHTHHHHH
T ss_pred -CCCC---CCCCCCCCHHHHHHHHHHHHHHHHH--------HcccCCCCeEEEEEeccCCCCCC-CCHHHHHHHHHHHHH
Confidence 0121 1234677889999999999999999 9999 9999999999999742 2356788 9999999
Q ss_pred HHhhcc-CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc-CCCCcceEEeecCCCCCCCC---CChhHhHHHHH
Q 013811 225 SYVKSI-DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN-LIPGIDFATVHSYPDQWLSS---SNDRDQLSFLN 299 (436)
Q Consensus 225 ~~Ir~~-Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~-~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~~~ 299 (436)
++||+. +|+++|+++. |+.+... |. ++.... ..+++ ++++|.|.. |... .+..+.+....
T Consensus 213 ~~IR~~~~~~~~iii~d-g~~~~~~---------w~---~~l~~~~~~~nv-v~s~H~Y~~-~~~~~~~~~~~~~i~~~~ 277 (408)
T 1h4p_A 213 EYLRNNIKSDQVIIIHD-AFQPYNY---------WD---DFMTENDGYWGV-TIDHHHYQV-FASDQLERSIDEHIKVAC 277 (408)
T ss_dssp HHHHHTTCCCCCEEEEC-TTCCTTG---------GG---GSSCGGGTCCSE-EEEEEECSC-SSHHHHTCCHHHHHHHHH
T ss_pred HHHHhhcCCCCceEeee-cccCchh---------hh---hhccccCCCCCE-EEEeeeccC-CCCccccCCHHHHHHHHH
Confidence 999998 9988777752 3321110 10 111111 12233 679999985 3321 11222233333
Q ss_pred HHHHHHHHHHHHhcCCcEEEEecCCCCCCC-------------------------------------CCChHHHHHHHHH
Q 013811 300 NWLDTHIQDAEHILRKPILLAEFGKSRKDP-------------------------------------GYSTYQRDVMFNT 342 (436)
Q Consensus 300 ~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-------------------------------------g~~~~~r~~~~~~ 342 (436)
.|.... .+ .++|++|+|||....+. .++ +.+.+.++.
T Consensus 278 ~~~~~~----~~-~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~c~~~~~~~~~~-~~~k~~~~~ 351 (408)
T 1h4p_A 278 EWGTGV----LN-ESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWS-DERKENTRR 351 (408)
T ss_dssp HHHHHH----TT-CSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCC-HHHHHHHHH
T ss_pred HHHHHH----hh-cCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCcccCCCChhhcc-HHHHHHHHH
Confidence 443321 22 57899999999875420 012 245567777
Q ss_pred HHHHHHHHhhcCCCccceeecccccCCCCCC
Q 013811 343 VYYKIYSSAKRGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 343 ~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~ 373 (436)
..++..++... ..||+||+|..+..+.|
T Consensus 352 ~~~aq~~~~~~---~~Gw~fWt~K~e~~~~W 379 (408)
T 1h4p_A 352 YVEAQLDAFEM---RGGWIIWCYKTESSLEW 379 (408)
T ss_dssp HHHHHHHHHTT---TTEEEESCSCCSSCSTT
T ss_pred HHHHHHHHHhh---cCCeEEEeEecCCCCCC
Confidence 77776676643 34999999999865556
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=233.17 Aligned_cols=261 Identities=14% Similarity=0.214 Sum_probs=166.4
Q ss_pred CCCCCEEeeCCeEEE-CCeEEEEEee--cccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCC-CCCCCccCCC
Q 013811 28 AGDGFIRTRGSHFLL-NGNLYFANGF--NAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDG-GYRPLQRSPG 103 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~-nGkp~~~~G~--N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~-~~~~lq~~pg 103 (436)
...++|+|+|++|+. ||+| ++|+ |.+|..+ ..+++|+.||++|+|+||+++.... .+ +.++
T Consensus 7 ~~~~~l~v~G~~ivd~~G~~--lrGv~~~~~w~~~---------~~~~d~~~i~~~G~N~VRipv~~~~~~~----~~~~ 71 (491)
T 2y8k_A 7 RGRPRLNAARTTFVGDNGQP--LRGPYTSTEWTAA---------APYDQIARVKELGFNAVHLYAECFDPRY----PAPG 71 (491)
T ss_dssp CCCCEECTTSSSEECTTSCB--CEEEEEECSSSCC---------CCHHHHGGGGGGTCCEEEEEEEECCTTT----TSTT
T ss_pred CCCceEEeCCCEEECCCCCE--eecccccCCcCCC---------CCHHHHHHHHHcCCCEEEECceeecccc----cCCC
Confidence 345689999999995 9999 7888 8777653 1237889999999999999664211 12 1233
Q ss_pred CCChh-hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcc
Q 013811 104 SYNEQ-MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRY 182 (436)
Q Consensus 104 ~~~~~-~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~ 182 (436)
.+++. .|+.||++|++|.++||+|||++|+. +. .+..+ ++.++++|++|++|
T Consensus 72 ~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~-----~~------------------~~~~~---~~~~~~~w~~iA~r- 124 (491)
T 2y8k_A 72 SKAPGYAVNEIDKIVERTRELGLYLVITIGNG-----AN------------------NGNHN---AQWARDFWKFYAPR- 124 (491)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHTCEEEEEEECT-----TC------------------TTCCC---HHHHHHHHHHHHHH-
T ss_pred ccChhHHHHHHHHHHHHHHHCCCEEEEECCCC-----CC------------------Ccccc---HHHHHHHHHHHHHH-
Confidence 45553 48999999999999999999999853 00 01122 47788999999999
Q ss_pred ccccccccCCCCcEEEEEeecCCCCCCCCCh------HHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCC--CCccccC
Q 013811 183 NTFTGIHYKDDPTIMAWELMNEPRCTSDPSG------RTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQS--TPQRKRV 254 (436)
Q Consensus 183 n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~------~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~--~~~~~~~ 254 (436)
||++|+|+ |+|+|||.....+.. +.+.+++++++++||+.||+++|++|...+++.. .+.+..
T Consensus 125 -------yk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~~~~g~~~~~~~~~- 195 (491)
T 2y8k_A 125 -------YAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALK- 195 (491)
T ss_dssp -------HTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEEEESCCCHHHHHHHHHH-
T ss_pred -------hCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEecccccCCCcccchhhc-
Confidence 99999998 999999985321111 2389999999999999999999999764211100 000000
Q ss_pred CCCCcccchhhhhcC-CCCc-ceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCC
Q 013811 255 NPNLDIGTDFVANNL-IPGI-DFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYS 332 (436)
Q Consensus 255 np~~~~g~df~~~~~-~~~i-D~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~ 332 (436)
+ .....++..... .+.. .++++|.|+... ++.+.++.+.+ .++||+|+|||......+..
T Consensus 196 ~--l~~~~~~~~~~~~~~~~n~v~s~H~Y~~~~---------------~~~~~l~~~~~-~g~Pv~igEfG~~~~~~~~~ 257 (491)
T 2y8k_A 196 D--IRAFNKAVFGNENAVWTNEAVAFHGYAGWQ---------------ETTIAVEELLK-AGYPCFMTEYAGGAWGSGMG 257 (491)
T ss_dssp H--HHHHHHHHHSSTTCCCSSEEEEEESTTCHH---------------HHHHHHHHHHH-TTCCEEEEECCCC--CCSCS
T ss_pred c--cccccccccccCCCCCCceeEEEeeCCCCc---------------ccHHHHHHHHH-cCCCEEEEeecccccCCCCc
Confidence 0 000000110010 1112 368999997531 12334444444 79999999999765111101
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 333 TYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 333 ~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
. ....++ +. ++. ..+||++|+|.++
T Consensus 258 ~-~~~~~~----~~-~~~-----~~i~w~~W~~~~~ 282 (491)
T 2y8k_A 258 G-LDVELT----YE-LER-----LGVSWLTFQYIPP 282 (491)
T ss_dssp S-CCHHHH----HH-HHH-----HTCEEEEEEECTT
T ss_pred c-hhHHHH----HH-HHh-----cCcceEEEeccCC
Confidence 0 011222 21 121 2479999999864
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-25 Score=221.41 Aligned_cols=262 Identities=13% Similarity=0.116 Sum_probs=170.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
...+++|+.||++|+|+||+.+. |..+++ .++.++++.++.||++|+.|.++||+|||++|+...
T Consensus 61 ~~~~~di~~i~~~G~n~vRipv~----w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~---------- 126 (380)
T 1edg_A 61 KTTKQMIDAIKQKGFNTVRIPVS----WHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVD---------- 126 (380)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCC----CGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBC----------
T ss_pred cccHHHHHHHHHcCCCEEEeccc----HHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchh----------
Confidence 35688999999999999999652 444554 356789999999999999999999999999997421
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHH-HHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---C----C-h----
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYY-KNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---P----S-G---- 213 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~-~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---~----~-~---- 213 (436)
|.. + ...+..++..++.| .++++.|++| ||++|+|++|+|+|||.+... . . +
T Consensus 127 w~~--~-----~~~~~~~~~~~~~~~~~~w~~ia~~--------~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~ 191 (380)
T 1edg_A 127 KVK--G-----YFPSSQYMASSKKYITSVWAQIAAR--------FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVD 191 (380)
T ss_dssp TTT--S-----BCSSGGGHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHH
T ss_pred hhc--C-----CCCccccHHHHHHHHHHHHHHHHHH--------hCCCCCEEEEEecCCCCcCCCCcccccccCCCchHH
Confidence 211 0 00123456788999 9999999999 999999999999999997532 0 0 1
Q ss_pred --HHHHHHHHHHHHHhhcc---CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCC-C--CcceEEeecCCCC-
Q 013811 214 --RTIQAWITEMASYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI-P--GIDFATVHSYPDQ- 284 (436)
Q Consensus 214 --~~~~~w~~~~~~~Ir~~---Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~-~--~iD~~s~H~Y~~~- 284 (436)
+.+.+|+++++++||+. ||+++|.+++..+ +.... ... .+...... + +-.++++|.|+..
T Consensus 192 ~~~~l~~~~~~~~~~IR~~g~~np~~~Iiv~g~~~-~~~~~---~~~-------~~~~p~d~~~~~~n~v~s~H~Y~~~~ 260 (380)
T 1edg_A 192 SINCINQLNQDFVNTVRATGGKNASRYLMCPGYVA-SPDGA---TND-------YFRMPNDISGNNNKIIVSVHAYCPWN 260 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CHHHH---HST-------TCCCCCCCTTCCSCEEEEEECCCSHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEECCCcC-Ccccc---ccc-------cccCCCCCccccCcEEEEEeecCCcc
Confidence 45688999999999999 5899998865332 10000 000 11100000 1 2348999999752
Q ss_pred CCC-------CCCh----hHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhc
Q 013811 285 WLS-------SSND----RDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKR 353 (436)
Q Consensus 285 w~~-------~~~~----~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~ 353 (436)
+.. .... +.....+...+..+...+.+ .++||+|+|||..... +.+.+.+|++.+++.+.+
T Consensus 261 f~~~~~~~~g~~~w~~~~~~~~~~i~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~~---- 332 (380)
T 1edg_A 261 FAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTS-RGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAKA---- 332 (380)
T ss_dssp HHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHH----
T ss_pred cccccccCCCCCccCCCchhhHHHHHHHHHHHHHHHHH-cCCCEEEEeccCCCCC---ChHHHHHHHHHHHHHHHH----
Confidence 000 0000 11112222222222223333 6899999999998653 345677777777665433
Q ss_pred CCCccceeecccccCCCCCCCCCceEEe
Q 013811 354 GGAAAGGLFWQLLTEGMDAFRDGYEIVL 381 (436)
Q Consensus 354 ~~~~~G~~~W~~~~~g~~~~~dg~~i~~ 381 (436)
...|+++|++++...+ +++|+++-
T Consensus 333 --~gig~~~W~~g~~~g~--~e~~g~~~ 356 (380)
T 1edg_A 333 --RGILCILWDNNNFSGT--GELFGFFD 356 (380)
T ss_dssp --TTCEEEECCCCCCSSS--SCCCCCEE
T ss_pred --CCCceEEECCCCCCCC--CcceeEEE
Confidence 2479999998764211 13466654
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-23 Score=209.21 Aligned_cols=253 Identities=16% Similarity=0.182 Sum_probs=164.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
...+++|+.||++|+|+||+.+. |..+.+ .++.++++.++.||++|+.|.++||+|||++|+. .+...
T Consensus 62 ~~~~~di~~i~~~G~N~vRipi~----w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~~-~~~~~----- 131 (376)
T 3ayr_A 62 KTTEDMFKVLIDNQFNVFRIPTT----WSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHHE-TWNHA----- 131 (376)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCC----CTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC-SSCCS-----
T ss_pred cCcHHHHHHHHHcCCCEEEEeeE----ChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc-ccccc-----
Confidence 34678999999999999999542 434443 3567899999999999999999999999999974 11000
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC------Ch---HHH
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP------SG---RTI 216 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~------~~---~~~ 216 (436)
.+ . ..+..++.|.++++.|++| |+++|.+++|+|+|||.+.... +. +.+
T Consensus 132 -----~~------~---~~~~~~~~~~~~w~~ia~~--------~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l 189 (376)
T 3ayr_A 132 -----FS------E---TLDTAKEILEKIWSQIAEE--------FKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAV 189 (376)
T ss_dssp -----CT------T---THHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHH
T ss_pred -----cc------c---chHHHHHHHHHHHHHHHHH--------HcCCCceeeEEeecCCCcCCCccccCCccHHHHHHH
Confidence 00 0 1256788999999999999 9999999999999999986421 11 346
Q ss_pred HHHHHHHHHHhhcc---CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCC---CcceEEeecCCCCCC----
Q 013811 217 QAWITEMASYVKSI---DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP---GIDFATVHSYPDQWL---- 286 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~---Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~---~iD~~s~H~Y~~~w~---- 286 (436)
.+|+++++++||+. +|+++|.++.... +. ++ ........| .-.++++|.|+....
T Consensus 190 ~~~~~~~~~aIR~~g~~np~~~Iiv~g~~~-~~--------~~------~~~~~~~~p~~~~n~v~s~H~Y~~~~~~~~~ 254 (376)
T 3ayr_A 190 NAMNAVFLKTVRSAGGNNPKRHLMIPPYAA-AC--------NE------NSFNNFIFPEDDDKVIASVHAYAPYNFALNN 254 (376)
T ss_dssp HHHHHHHHHHHHTSSTTGGGCCEEECCGGG-BC--------SH------HHHHTCCCCTTCTTEEEEEECCCSHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEECCCcc-Cc--------cc------cccccccCCCCCCCEEEEEeecCchhccccC
Confidence 77899999999998 4557888874211 10 00 000111122 334899999986211
Q ss_pred ---CCCChhH----hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013811 287 ---SSSNDRD----QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAG 359 (436)
Q Consensus 287 ---~~~~~~~----~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G 359 (436)
.....+. .+....+++.+ ...+ .++||+|||||..... +.+.+..|++.+.+.+ ++ ...|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~g~Pv~igEfG~~~~~---~~~~~~~w~~~~~~~~----~~--~~ig 321 (376)
T 3ayr_A 255 GEGAVDKFDAAGKRDLEWNINLMKK---RFVD-QGIPMILGEYGAMNRD---NEEDRATWAEFYMEKV----TA--MGVP 321 (376)
T ss_dssp STTCCSSCCHHHHHHHHHHHHHHHH---HTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHH----HT--TTCC
T ss_pred CCCcccccChhhhhHHHHHHHHHHH---HHHH-cCCcEEEEccccCCCC---CcHHHHHHHHHHHHHH----HH--CCCc
Confidence 0011111 11111112211 1222 6899999999998653 3456777777665433 22 3479
Q ss_pred eeecccccCCCCCCCCCceEEeC
Q 013811 360 GLFWQLLTEGMDAFRDGYEIVLS 382 (436)
Q Consensus 360 ~~~W~~~~~g~~~~~dg~~i~~~ 382 (436)
+++|++++... .+++|+++..
T Consensus 322 ~~~W~~g~~~g--~~~~~g~~d~ 342 (376)
T 3ayr_A 322 QIWWDNGVFEG--TGERFGLLDR 342 (376)
T ss_dssp EEEEECSCCSS--SSCCCCCEET
T ss_pred EEEECCCCCCC--CCccceeEeC
Confidence 99999876311 1245777653
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=212.09 Aligned_cols=249 Identities=12% Similarity=0.130 Sum_probs=161.2
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.-.++.++.|+++|+|+||+.+. |..+++ .+|.++++.|+.||++|++|.++||+|||++|+.-. +.|.
T Consensus 43 ~~t~~m~~~i~~~G~N~vRipi~----w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~-~~g~---- 113 (340)
T 3qr3_A 43 DGIGQMQHFVNEDGMTIFRLPVG----WQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYAR-WNGG---- 113 (340)
T ss_dssp CHHHHHHHHHHHHCCCEEEEEEC----HHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTE-ETTE----
T ss_pred ccHHHHHHHHHHCCCCEEEEEee----HHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcc-cCCc----
Confidence 34677788999999999999552 444554 467899999999999999999999999999997521 1110
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHH
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS 225 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~ 225 (436)
. +-+++..++.+.++++.|++| |+++|.|+ |+|+|||... +.+.+.++++++++
T Consensus 114 --------~------~~~~~~~~~~~~~~w~~iA~r--------yk~~~~Vi-~el~NEP~~~---~~~~w~~~~~~~i~ 167 (340)
T 3qr3_A 114 --------I------IGQGGPTNAQFTSLWSQLASK--------YASQSRVW-FGIMNEPHDV---NINTWAATVQEVVT 167 (340)
T ss_dssp --------E------TTTTSSCHHHHHHHHHHHHHH--------HTTCTTEE-EECCSCCCSS---CHHHHHHHHHHHHH
T ss_pred --------c------cCCCHHHHHHHHHHHHHHHHH--------hCCCCcEE-EEecCCCCCC---CHHHHHHHHHHHHH
Confidence 0 001233578899999999999 99999996 9999999976 36788999999999
Q ss_pred HhhccCCC-CEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCC----CcceEEeecCCCCCCCCCChhHhHHHHHH
Q 013811 226 YVKSIDRN-HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP----GIDFATVHSYPDQWLSSSNDRDQLSFLNN 300 (436)
Q Consensus 226 ~Ir~~Dp~-~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~----~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~ 300 (436)
+||+.||+ ++|.+++.++-+... + ..+. ..+.......| .--++++|.|..........+.......+
T Consensus 168 aIR~~~~~~~~Iiv~g~~w~~~~~--w--~~~~---~~~~l~~l~dP~~~~~nlvys~H~Y~~~~~sgt~~~~~~~~i~~ 240 (340)
T 3qr3_A 168 AIRNAGATSQFISLPGNDWQSAGA--F--ISDG---SAAALSQVTNPDGSTTNLIFDVHKYLDSDNSGTHAECTTNNIDG 240 (340)
T ss_dssp HHHHTTCCSSCEEEECSGGGBTTT--T--TTTS---HHHHHTTCCCTTSCCTTEEEEEECCCSTTSSSCSSSCCCCSTTT
T ss_pred HHHhhCCCccEEEEeCCccccccc--c--cccc---cchhhcccCCCCCCCCCEEEEEEeCCCCCCCCCCcccchhhHHH
Confidence 99999999 899998755422100 0 0000 00000111222 23378999998532211110000000001
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.++...+.+.+ .++|++|+|||.... ....++++.+++.+-+ ......||.+|..++.
T Consensus 241 ~~~~~~~~~~~-~g~pv~iGEfG~~~~------~~~~~~~~~~l~~~~~---~~~~~~gw~~W~~G~~ 298 (340)
T 3qr3_A 241 AFSPLATWLRQ-NNRQAILTETGGGNV------QSCIQDMCQQIQYLNQ---NSDVYLGYVGWGAGSF 298 (340)
T ss_dssp THHHHHHHHHH-TTCCEEEEEECCCSS------HHHHHHHHHHHHHHHT---TTTTEEEEEEEEEETC
T ss_pred HHHHHHHHHHH-cCCcEEEeCccCCCC------hHHHHHHHHHHHHHHH---cCCcceEEEEecCCCC
Confidence 12223333343 799999999998632 2334556655554322 2235678999988764
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-23 Score=208.14 Aligned_cols=256 Identities=17% Similarity=0.208 Sum_probs=170.1
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCC-CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPG-SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg-~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~ 149 (436)
+++|+.||++|+|+|||.+. |..+++.++ .|....++.||++|+.|+++||+|||+||... |+.+.+.
T Consensus 76 e~D~~~ik~~G~N~VRipi~----~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~p---G~qng~~---- 144 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIG----YWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAP---GSQNGFD---- 144 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECT---TCSSCCG----
T ss_pred HHHHHHHHHcCCCEEEEccc----HHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCCC---ccccccc----
Confidence 78999999999999999664 223444333 25445799999999999999999999999642 2211110
Q ss_pred hcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC---CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHH
Q 013811 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD---PTIMAWELMNEPRCTSDPSGRTIQAWITEMASY 226 (436)
Q Consensus 150 ~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~---p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~ 226 (436)
..|. .....|.++..++.+.++++.|++| |+++ |+|++|+|.|||..... +.+.+..|+++++++
T Consensus 145 ~sG~---~~~~~w~~~~~~~~~~~~w~~iA~r--------y~~~~y~~~V~~~el~NEP~~~~~-~~~~~~~~~~~a~~~ 212 (399)
T 3n9k_A 145 NSGL---RDSYNFQNGDNTQVTLNVLNTIFKK--------YGGNEYSDVVIGIELLNEPLGPVL-NMDKLKQFFLDGYNS 212 (399)
T ss_dssp GGSS---TTCCCTTSTTHHHHHHHHHHHHHHH--------HSSGGGTTTEEEEESCSCCCGGGS-CHHHHHHHHHHHHHH
T ss_pred CCCC---CCCCCCCCHHHHHHHHHHHHHHHHH--------hhcccCCCceEEEEeccCCCCCCC-CHHHHHHHHHHHHHH
Confidence 1121 1123456666899999999999999 9999 99999999999997521 357899999999999
Q ss_pred hhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc-CCCCcceEEeecCCCCCCCC---CChhHhHHHHHHHH
Q 013811 227 VKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN-LIPGIDFATVHSYPDQWLSS---SNDRDQLSFLNNWL 302 (436)
Q Consensus 227 Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~-~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~~~~~i 302 (436)
||+.||+++|+++. ++.... .|. .|.... ..+++ ++++|.|.. +... .+..+.+.....|.
T Consensus 213 IR~~~p~~~Iii~d-g~~~~~---------~W~---~~l~~~~~~~nv-v~d~H~Y~~-f~~~~~~~~~~~~i~~~c~~~ 277 (399)
T 3n9k_A 213 LRQTGSVTPVIIHD-AAQVFG---------YWN---NFLTVAEGQWNV-VVDHHHYQV-FSGGELSRNINDHISVACNWG 277 (399)
T ss_dssp HHHTTCCCCEEEEC-TTCCTT---------TTT---TSSCGGGTCCSE-EEEEECCSC-SSHHHHTSCHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEeC-CCCChH---------HHH---hhcccccCCCCE-EEEeccccC-CCcccccCCHHHHHHHHHHHH
Confidence 99999999999974 442211 011 111111 12333 789999974 3211 11112222222221
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCCC-----------------------C----------CChHHHHHHHHHHHHHHHH
Q 013811 303 DTHIQDAEHILRKPILLAEFGKSRKDP-----------------------G----------YSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 303 ~~~~~~a~~~~~kPv~i~EfG~~~~~~-----------------------g----------~~~~~r~~~~~~~~~~i~~ 349 (436)
. ...+ .+.|++||||....+++ | ++ +.+.++++...++..+
T Consensus 278 ~----~~~~-~~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~-~~~k~~~~~f~~aQ~~ 351 (399)
T 3n9k_A 278 W----DAKK-ESHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWS-DEHKTDTRRYIEAQLD 351 (399)
T ss_dssp H----HHHT-CSSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCC-HHHHHHHHHHHHHHHH
T ss_pred H----HHhc-CCCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCcCcCcccccc-HHHHHHHHHHHHHHHH
Confidence 1 1122 46899999998764310 0 12 3456777777777666
Q ss_pred HhhcCCCccceeecccccCCCCCC
Q 013811 350 SAKRGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g~~~~ 373 (436)
+... ..||+||+|..+..+.|
T Consensus 352 ~~e~---~~Gw~fWtwK~e~~~~W 372 (399)
T 3n9k_A 352 AFEY---TGGWVFWSWKTENAPEW 372 (399)
T ss_dssp HHHT---TTEEEESCSCCSSCGGG
T ss_pred HHHc---CCcEEEeeeecCCCCCC
Confidence 6654 35999999998765556
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=223.83 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=165.6
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||||++++|+|.|..........+++.++++|+.||++|+|+||++.. + .+
T Consensus 308 ~~GfR~ve~~~~~f~lNGkpi~l~Gvn~h~~~p~~G~~~~~e~~~~dl~lmK~~G~N~VR~~hy-----p--------~~ 374 (1024)
T 1yq2_A 308 RLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHY-----P--------PH 374 (1024)
T ss_dssp EECCCCEEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTS-----C--------CC
T ss_pred eeceEEEEEeCCEEEECCceEEEEEEEccCCccccccCCCHHHHHHHHHHHHHcCCCEEEecCC-----C--------CC
Confidence 3466 8889999999999999999998643322222235689999999999999999999642 1 11
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.++++|.++||+|+..+. .+. .|+ .|..|. .....+|+.++.+.+.++.+|+|
T Consensus 375 -------~~fydlcDe~Gi~V~~E~~-~~~--~g~-~~~~w~----------~~~~~~p~~~~~~~~~~~~mV~r----- 428 (1024)
T 1yq2_A 375 -------PRLLDLADEMGFWVILECD-LET--HGF-EAGGWV----------ENPSDVPAWRDALVDRMERTVER----- 428 (1024)
T ss_dssp -------HHHHHHHHHHTCEEEEECS-CBC--GGG-TTTTTT----------TCGGGCGGGHHHHHHHHHHHHHH-----
T ss_pred -------HHHHHHHHHCCCEEEEcCC-ccc--CCc-cccccc----------ccCCCCHHHHHHHHHHHHHHHHH-----
Confidence 4788999999999998872 111 121 122231 11235788899999999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
++|||+|++|.++||+.+. .++++|++.||++||+|+|+.++ ++
T Consensus 429 ---~rNHPSIi~WslgNE~~~g---------~~~~~l~~~ik~~DptRpv~~~~-~~----------------------- 472 (1024)
T 1yq2_A 429 ---DKNHPSIVMWSLGNESGTG---------SNLAAMAAWAHARDSSRPVHYEG-DY----------------------- 472 (1024)
T ss_dssp ---HTTCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECTT-CT-----------------------
T ss_pred ---cCCCCeEEEEECCcCcchH---------HHHHHHHHHHHHhCCCceEEeCC-cc-----------------------
Confidence 9999999999999999863 24788999999999999998653 10
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHH----------HHHHHHHhcCCcEEEEecCCCCCCCCCChHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT----------HIQDAEHILRKPILLAEFGKSRKDPGYSTYQR 336 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~----------~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r 336 (436)
..+.+|++++ +|+.. ..+.+|+.. ....... .+||++++|||...... ...-
T Consensus 473 --~~~~~Dv~s~-~Y~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kP~i~~Eygha~gn~---~g~~ 534 (1024)
T 1yq2_A 473 --TGAYTDVYSR-MYSSI-----------PETDSIGRNDSHALLLGCDSAESARQ-RTKPFILCEYVHAMGNG---PGAM 534 (1024)
T ss_dssp --TCSSCSSEEE-ESCCH-----------HHHHHHHCSSCCCCCTTCCHHHHHHH-TTSCEEEEEESCCCSSC---CCCH
T ss_pred --cCCccceecc-CCCCH-----------HHHHHHHhcccccccccccchhhccC-CCCceEEEeeccccCCC---ccCH
Confidence 1245889998 67631 122233210 0000122 58999999999754221 1112
Q ss_pred HHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 337 DVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 337 ~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+|+ +.+.+ ...++|.++|+|.|.+
T Consensus 535 ~~y~----~~~~~----~~~~~G~fiW~~~D~~ 559 (1024)
T 1yq2_A 535 DQYE----ALVDK----YPRLHGGFVWEWRDHG 559 (1024)
T ss_dssp HHHH----HHHHH----CTTEEEEEESCSBCCC
T ss_pred HHHH----HHHHh----CCcceEEEEeeccccc
Confidence 2332 22222 3478999999999975
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.3e-22 Score=217.90 Aligned_cols=248 Identities=17% Similarity=0.221 Sum_probs=164.9
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||||++++|+|.|..........+.+.++++|+.||++|+|+||++...+ +
T Consensus 334 ~~GfR~iei~~~~f~lNGkpi~lkGvn~H~~~p~~G~a~~~e~~~~Di~lmK~~g~NaVRtsHyp~-------------~ 400 (1032)
T 3oba_A 334 HVGFRQVELKDGNITVNGKDILFRGVNRHDHHPRFGRAVPLDFVVRDLILMKKFNINAVRNSHYPN-------------H 400 (1032)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCC-------------C
T ss_pred EeccEEEEEeCCEEEECCeEEEEeccCcCccCcccCcCCCHHHHHHHHHHHHHcCCcEEEecCCCC-------------h
Confidence 3466 888999999999999999999875443322223568999999999999999999964321 1
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc-CCCCC----------CCCC-CCCChHHHHHHHHH
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ-GQFLT----------SDDD-FFRNPVVKGYYKNL 174 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~-G~~~~----------~~~~-f~~~~~~~~~~~~~ 174 (436)
++++++|.++||+|+-...- . ..|+ ..|.... +..+. .... .-.+|+.++.+.+.
T Consensus 401 -------~~fydlCDe~Gi~V~dE~~~--e-~hG~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~ 467 (1032)
T 3oba_A 401 -------PKVYDLFDKLGFWVIDEADL--E-THGV---QEPFNRHTNLEAEYPDTKNKLYDVNAHYLSDNPEYEVAYLDR 467 (1032)
T ss_dssp -------TTHHHHHHHHTCEEEEECSC--B-CGGG---GHHHHHHTTCCCCCTTTTHHHHTTTGGGTTTCGGGHHHHHHH
T ss_pred -------HHHHHHHHHCCCEEEEcccc--c-cCCc---cccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 26789999999999987521 1 1121 1121100 00000 0011 13468889999999
Q ss_pred HHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccC
Q 013811 175 IKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRV 254 (436)
Q Consensus 175 v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~ 254 (436)
++.+|+| ++|||+|++|.++||+... . .+++|++.+|++||+|+|+..+ .+
T Consensus 468 ~~~mV~R--------drNHPSIi~WslgNE~~~g-----~----~~~~~~~~~k~~DptRpv~~e~--~~---------- 518 (1032)
T 3oba_A 468 ASQLVLR--------DVNHPSIIIWSLGNEACYG-----R----NHKAMYKLIKQLDPTRLVHYEG--DL---------- 518 (1032)
T ss_dssp HHHHHHH--------HTTCTTEEEEECCBSCCCC-----H----HHHHHHHHHHHHCTTSEEECTT--CT----------
T ss_pred HHHHHHH--------hcCCCeEEEEECccCCccc-----h----hHHHHHHHHHHhCCCCcEEecc--Cc----------
Confidence 9999999 9999999999999998653 1 3578999999999999998542 10
Q ss_pred CCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChH
Q 013811 255 NPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTY 334 (436)
Q Consensus 255 np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~ 334 (436)
.....||++. +|+.. ..+.+++....... ...+||++++|||.....+ ..
T Consensus 519 --------------~~~~~Di~s~-mY~~~-----------~~i~~~~~~~~~~~-~~~~kP~i~~Ey~Hamgn~---~g 568 (1032)
T 3oba_A 519 --------------NALSADIFSF-MYPTF-----------EIMERWRKNHTDEN-GKFEKPLILCEYGHAMGNG---PG 568 (1032)
T ss_dssp --------------TCTTCSSEEE-ESCCH-----------HHHHHHHHHHBCTT-SCBSSCEEEEEESCCCSSC---CC
T ss_pred --------------Ccccceeeec-cCCCH-----------HHHHHHHhhCcccc-cccCCCEEEEeccccccCC---CC
Confidence 1245788886 78642 22233332210000 0128999999999765432 11
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 335 QRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 335 ~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.-.+|. +.+.+ .+.+.|.++|.|.|++
T Consensus 569 ~l~~yw----~~~~~----~p~~~GgfiWdw~Dq~ 595 (1032)
T 3oba_A 569 SLKEYQ----ELFYK----EKFYQGGFIWEWANHG 595 (1032)
T ss_dssp CHHHHH----HHHHH----CTTEEEEEESCSBCCC
T ss_pred CHHHHH----HHHHh----CCCeeEEEEEeccccc
Confidence 223333 33323 3578999999999976
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=217.38 Aligned_cols=232 Identities=15% Similarity=0.247 Sum_probs=161.9
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||||++++|+|.|.....+ ...+.+.++++|+.||++|+|+||++.. + .+
T Consensus 332 ~~GfR~ie~~~~~f~lNGk~i~lrGvn~h~~~~~G-~~~~~e~~~~dl~lmK~~G~N~IR~~hy-----p--------~~ 397 (1010)
T 3bga_A 332 EVGFRTSEIKDGRFCINGVPVLVKGTNRHEHSQLG-RTVSKELMEQDIRLMKQHNINMVRNSHY-----P--------TH 397 (1010)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEEECCCBTTB-SCCCHHHHHHHHHHHHHTTCCEEEETTS-----C--------CC
T ss_pred eeCceEEEEeCCEEEECCceEEEECcccCCccccc-CcCCHHHHHHHHHHHHHCCCCEEEeCCC-----C--------CC
Confidence 3466 88899999999999999999986443222 2346689999999999999999999642 1 11
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.++++|.++||+|+..+.. + . .|+. | + ......+|+..+.+.+.++.+|+|
T Consensus 398 -------~~~ydlcDe~Gi~V~~E~~~-~-~-~g~~-~-------~-----~~~~~~~~~~~~~~~~~~~~mV~r----- 449 (1010)
T 3bga_A 398 -------PYWYQLCDRYGLYMIDEANI-E-S-HGMG-Y-------G-----PASLAKDSTWLTAHMDRTHRMYER----- 449 (1010)
T ss_dssp -------HHHHHHHHHHTCEEEEECSC-B-C-GGGC-S-------S-----TTCTTTCGGGHHHHHHHHHHHHHH-----
T ss_pred -------HHHHHHHHHCCCEEEEccCc-c-c-cCcc-c-------c-----CCcCCCCHHHHHHHHHHHHHHHHH-----
Confidence 37889999999999988732 1 1 1110 1 0 011235678889999999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
++|||+|++|.++||+... ..+++|++.||++||+|+|+.+..+ .
T Consensus 450 ---~rNHPSIi~WslgNE~~~g---------~~~~~l~~~ik~~DptRpV~~~~~~---------------------~-- 494 (1010)
T 3bga_A 450 ---SKNHPAIVIWSQGNEAGNG---------INFERTYDWLKSVEKGRPVQYERAE---------------------L-- 494 (1010)
T ss_dssp ---HTTCTTEEEEECCSSSCCS---------HHHHHHHHHHHHHCSSSCEECGGGT---------------------T--
T ss_pred ---hCCCCEEEEEECccCcCcH---------HHHHHHHHHHHHHCCCCcEEeCCCC---------------------c--
Confidence 9999999999999999763 2467899999999999999865421 0
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~ 346 (436)
.. .+|++++ .|+.. ..+.+| .+ .. ..+||++++|||..... +...-.+|++ .
T Consensus 495 --~~-~~Di~~~-~Y~~~-----------~~~~~~----~~-~~-~~~kP~i~sEyg~a~gn---~~g~~~~y~~----~ 546 (1010)
T 3bga_A 495 --NY-NTDIYCR-MYRSV-----------DEIKAY----VG-KK-DIYRPFILCEYLHAMGN---SCGGMKEYWE----V 546 (1010)
T ss_dssp --SS-SCSSBCC-TTCCH-----------HHHHHH----HT-ST-TCCSCEEEEEESCCCSS---CCTTHHHHHH----H
T ss_pred --cc-cccEeec-cCCCh-----------HHHHhh----hh-cc-CCCCcEEEEEccccCCC---CCcCHHHHHH----H
Confidence 02 4778887 67631 112222 21 11 25899999999975322 1112223322 2
Q ss_pred HHHHhhcCCCccceeecccccCC
Q 013811 347 IYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 347 i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+.+...+.|.++|.|.|.+
T Consensus 547 ----~~~~p~~~G~fiW~~~D~~ 565 (1010)
T 3bga_A 547 ----FENEPMAQGGCIWDWVDQN 565 (1010)
T ss_dssp ----HTTCTTEEEEEESCSBCCC
T ss_pred ----HHhCCcceEEEeEeeEcce
Confidence 2223468999999999975
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=197.09 Aligned_cols=284 Identities=17% Similarity=0.233 Sum_probs=187.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 58 Y~~~~eDi~lm~~~G~~~~R~si----~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h-~d-------~P 125 (453)
T 3ahx_A 58 YHRYKEDVQLLKSLGIKSYRFSI----AWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYH-WD-------LP 125 (453)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred HHHHHHHHHHHHHhCCCeEeccc----CHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC-------cc
Confidence 46799999999999999999933 48889998 99999999999999999999999999999985 32 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....| -|.+++..+.|.+|++.+++| |++. |..|.+.|||.+.. .+ +.
T Consensus 126 ~~l~~~g--------gw~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 187 (453)
T 3ahx_A 126 QKLQDIG--------GWANPQVADYYVDYANLLFRE--------FGDR--VKTWITHNEPWVASYLGYALGVHAPGIKDM 187 (453)
T ss_dssp HHHHTTT--------GGGSHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCH
T ss_pred HhHhhCC--------CCCCchHHHHHHHHHHHHHHH--------hCCc--cceEEEccCcchhhccccccCcCCCCcccH
Confidence 6665433 267899999999999999999 9987 78999999998631 01 11
Q ss_pred -HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc--------------------ccCCCCC-----
Q 013811 214 -RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR--------------------KRVNPNL----- 258 (436)
Q Consensus 214 -~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~--------------------~~~np~~----- 258 (436)
..++.- ...+.+.+|+.+|+..|.+-.. ..+..+. +.. ....|..
T Consensus 188 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~ 267 (453)
T 3ahx_A 188 KMALLAAHNILLSHFKAVKAYRELEQDGQIGITLNLSTCYSNSADEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIF 267 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEECCCEEESSSSHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCceeecCCCCHHHHHHHHHHHHHHhHHHhHHhhCCCCCHHHHHHH
Confidence 111111 2355678899999876543221 2222211 100 0111110
Q ss_pred -ccc--chhh---hhcCCCCcceEEeecCCCCCCC---CC---------Chh-H--hHHHHHHHHHHHHHHHHHhcC-Cc
Q 013811 259 -DIG--TDFV---ANNLIPGIDFATVHSYPDQWLS---SS---------NDR-D--QLSFLNNWLDTHIQDAEHILR-KP 316 (436)
Q Consensus 259 -~~g--~df~---~~~~~~~iD~~s~H~Y~~~w~~---~~---------~~~-~--~~~~~~~~i~~~~~~a~~~~~-kP 316 (436)
..+ .+|. .......+||+++++|...... .. ..+ . ..+...+-|+..+....+.++ +|
T Consensus 268 ~~~~~~p~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~rY~~~P 347 (453)
T 3ahx_A 268 SDTNIMPELPKELFTEVFETSDFLGINYYTRQVVKNNSEAFIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHRDYGNID 347 (453)
T ss_dssp HHTTCCCCCCTTTTTTTCCCCSEEEEECCCCEEEEECTTSGGGEEECCCSSCBCTTCCBCCHHHHHHHHHHHHHHHTTCE
T ss_pred HhcCCCCCCCHHHHHHhhcCCCEEEeccccceEEecCCCCCCCccccCCCCCcCCCCCccChHHHHHHHHHHHHHcCCCC
Confidence 000 0000 0112245899999999642110 00 000 0 000012223333333333365 89
Q ss_pred EEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 317 ILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 317 v~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
|+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++.
T Consensus 348 i~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~--eW~~gy~~RfGl~~V 420 (453)
T 3ahx_A 348 LYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDNF--EWAEGYEKRFGIVHV 420 (453)
T ss_dssp EEEEEECCCCCCCCCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGGGGCCCCSEEE
T ss_pred EEEEecCCCCCCccccCCCcCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCCcccc--ccccCccCcCCeEEE
Confidence 999999997543 12346789999999999999999999899999999999985 36543 555553
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=200.11 Aligned_cols=270 Identities=14% Similarity=0.159 Sum_probs=180.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
.+.+++|++.|+++|+|++|+-+ .|+.++|.+|.+|++.++.+|.+|++|.++||+++++|++. + .|.
T Consensus 49 Y~~~~eDi~lm~~~G~~~~R~si----~W~ri~P~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~-d-------~P~ 116 (423)
T 1vff_A 49 WELYRDDIQLMTSLGYNAYRFSI----EWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLHHF-T-------SPL 116 (423)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC----CHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------CBH
T ss_pred hhccHHHHHHHHHcCCCEEEeec----CHHHhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEccCC-c-------ccH
Confidence 46789999999999999999943 48889999999999999999999999999999999999863 2 356
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch-
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG- 213 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~- 213 (436)
|....| -|.+++.++.|.+|++.+++| |++ |..|++.|||.+.. .+ +.
T Consensus 117 ~l~~~g--------gw~~~~~~~~f~~ya~~~~~r--------~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~ 177 (423)
T 1vff_A 117 WFMKKG--------GFLREENLKHWEKYIEKVAEL--------LEK---VKLVATFNEPMVYVMMGYLTAYWPPFIRSPF 177 (423)
T ss_dssp HHHHTT--------GGGSGGGHHHHHHHHHHHHHH--------TTT---CCEEEEEECHHHHHHHHHTSCSSTTCCCCHH
T ss_pred HHHhcC--------CCCCHHHHHHHHHHHHHHHHH--------hCC---CceEEEecCcchhhhccccccccCCCccchH
Confidence 665433 267899999999999999999 999 77999999998531 01 11
Q ss_pred HHHHH---HH---HHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCC----cccch-----hhhh-----------
Q 013811 214 RTIQA---WI---TEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL----DIGTD-----FVAN----------- 267 (436)
Q Consensus 214 ~~~~~---w~---~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~----~~g~d-----f~~~----------- 267 (436)
..++. .+ ..+.+.+|+ +...-+++.....+..+. +|.- ....+ |...
T Consensus 178 ~~~~a~h~ll~Aha~Av~~~r~-~~~iG~~~~~~~~~P~~~------~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~ 250 (423)
T 1vff_A 178 KAFKVAANLLKAHAIAYELLHG-KFKVGIVKNIPIILPASD------KERDRKAAEKADNLFNWHFLDAIWSGKYRGVFK 250 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECCEEEESSS------SHHHHHHHHHHHHHHTHHHHHHHHHCEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCceEEEEeCCceecCCC------CHHHHHHHHHHHHHHHHHHhhHhhccccchhcC
Confidence 11111 11 334566777 443333333322232211 1100 00000 0000
Q ss_pred ---cCCCCcceEEeecCCCCCCC---------------CC--Ch-hHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 013811 268 ---NLIPGIDFATVHSYPDQWLS---------------SS--ND-RDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR 326 (436)
Q Consensus 268 ---~~~~~iD~~s~H~Y~~~w~~---------------~~--~~-~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~ 326 (436)
.....+||+++|+|...... .. .. ....+...+-|+..+... +.+++||+|+|+|+..
T Consensus 251 ~~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~L~~~-~rY~~Pi~ITENG~~~ 329 (423)
T 1vff_A 251 TYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKKA-SRYGRPLYITENGIAT 329 (423)
T ss_dssp EEECCCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHHHHHHH-GGGCSCEEEEECCCCC
T ss_pred ccHhhcCCCCEEEEccccceeeeccCCCCCccccccCCCCCCCCCCCCCccCHHHHHHHHHHH-HHcCCCEEEEeCCCCC
Confidence 01356899999999632110 00 00 000000112244444444 3488899999999975
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCC----CceEEe
Q 013811 327 KDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRD----GYEIVL 381 (436)
Q Consensus 327 ~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~d----g~~i~~ 381 (436)
. .++.|.+|++..+..+.+++++|..+.|++.|++.|+. +|.. .|++++
T Consensus 330 ~----dD~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~gy~~RfGl~~ 382 (423)
T 1vff_A 330 L----DDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNY--EWKEGFGPRFGLVE 382 (423)
T ss_dssp S----CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGTTCCCCCSEE
T ss_pred C----ccHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCccc--ccccCCCCCCcEEE
Confidence 4 26899999999999999999888889999999999985 3544 355555
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=216.33 Aligned_cols=244 Identities=14% Similarity=0.206 Sum_probs=161.1
Q ss_pred CCCC--EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGF--IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~f--v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|| |++++++|.+||||++++|+|.|..........+.+.++++|+.||++|+|+||++.. + .+
T Consensus 329 ~~GfR~ie~~~~~f~lNGkpi~lrGvn~h~~~p~~G~~~~~e~~~~dl~lmK~~g~N~vR~~hy-----p--------~~ 395 (1023)
T 1jz7_A 329 DVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHY-----P--------NH 395 (1023)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTS-----C--------CC
T ss_pred EEeeEEEEEeCCEEEECCEEEEEEEeeccccCcccccCCCHHHHHHHHHHHHHcCCCEEEecCC-----C--------CC
Confidence 3466 8889999999999999999998643322222245689999999999999999999632 1 11
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.++++|.++||+|+..+.. + . .|+ |. ......+|+..+.+.+.++.+|+|
T Consensus 396 -------~~~~dlcDe~Gi~V~~E~~~-~-~-~g~-----~~---------~~~~~~~p~~~~~~~~~~~~mV~r----- 446 (1023)
T 1jz7_A 396 -------PLWYTLCDRYGLYVVDEANI-E-T-HGM-----VP---------MNRLTDDPRWLPAMSERVTRMVQR----- 446 (1023)
T ss_dssp -------HHHHHHHHHHTCEEEEECSC-B-C-TTS-----SS---------TTTTTTCGGGHHHHHHHHHHHHHH-----
T ss_pred -------HHHHHHHHHCCCEEEECCCc-c-c-CCc-----cc---------cCcCCCCHHHHHHHHHHHHHHHHH-----
Confidence 37889999999999988732 1 1 111 10 011234688889999999999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
++|||+|++|.++||+... ..+++|++.||++||+|+|+.+..+.
T Consensus 447 ---~rNHPSIi~WslgNE~~~~---------~~~~~l~~~ik~~DptRpv~~~~~~~----------------------- 491 (1023)
T 1jz7_A 447 ---DRNHPSVIIWSLGNESGHG---------ANHDALYRWIKSVDPSRPVQYEGGGA----------------------- 491 (1023)
T ss_dssp ---HTTCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECCTTTS-----------------------
T ss_pred ---hCCCCEEEEEECccCCcch---------HHHHHHHHHHHHhCCCCeEEecCCCC-----------------------
Confidence 9999999999999999753 24678999999999999998654211
Q ss_pred hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 267 NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 267 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~ 346 (436)
..+.+|++++| |+......... .+.+|+...-..... .+||++++|||..... +.....+|+ +.
T Consensus 492 --~~~~~Dv~s~~-Y~~~~~~~p~~-----~~~~~~~~~~~~~~~-~~kP~i~~Eygha~gn---s~~~~~~y~----~~ 555 (1023)
T 1jz7_A 492 --DTTATDIICPM-YARVDEDQPFP-----AVPKWSIKKWLSLPG-ETRPLILCEYAHAMGN---SLGGFAKYW----QA 555 (1023)
T ss_dssp --SSTTCSSBCCB-SCCSSCCBCCS-----SSCBCCHHHHHTSTT-CCCCEEEEEESCCCSS---CCTTHHHHH----HH
T ss_pred --CCccccEeecc-cCchhhcchhH-----HHHHHHhcccccccC-CCccEEEEEECCCCCC---CcccHHHHH----HH
Confidence 02457788875 54321000000 000011000000001 5799999999975422 111222332 22
Q ss_pred HHHHhhcCCCccceeecccccCC
Q 013811 347 IYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 347 i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+.+ .+.+.|.++|.|.|.+
T Consensus 556 ~~~----~p~~~G~fiW~~~D~~ 574 (1023)
T 1jz7_A 556 FRQ----YPRLQGGFVWDWVDQS 574 (1023)
T ss_dssp HHH----CTTEEEEEESCSBCCC
T ss_pred HHh----CCccceeeeeeeeccc
Confidence 222 3468899999999974
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=198.98 Aligned_cols=280 Identities=13% Similarity=0.211 Sum_probs=184.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 80 Y~~~~eDi~lm~~~G~~~~R~si----~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d-------~P 147 (468)
T 2j78_A 80 YNRWKEDIEIIEKLGVKAYRFSI----SWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYH-WD-------LP 147 (468)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred cccCHHHHHHHHHcCCCEEEecc----CHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccC-CC-------Cc
Confidence 35789999999999999999943 48888988 89999999999999999999999999999986 32 25
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....| -|.+++..+.|.+|++.+++| |++ .|..|+++|||.+.. .+ +.
T Consensus 148 ~~l~~~g--------gw~~~~~~~~F~~ya~~~~~~--------~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 209 (468)
T 2j78_A 148 FALQLKG--------GWANREIADWFAEYSRVLFEN--------FGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDI 209 (468)
T ss_dssp HHHHTTT--------GGGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred hhhhhcC--------CCCChHHHHHHHHHHHHHHHH--------hCC--ccceEEEccccchhhccccccccCCCCcccH
Confidence 5654433 267889999999999999999 999 577899999998531 01 11
Q ss_pred -HHHHH---H---HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc---------------------ccCCCC-----
Q 013811 214 -RTIQA---W---ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR---------------------KRVNPN----- 257 (436)
Q Consensus 214 -~~~~~---w---~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~---------------------~~~np~----- 257 (436)
..++. . ...+.+.||+.+|+..|.+-.. ..+..+. +.. ....|.
T Consensus 210 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~~f~dp~~~G~YP~~~~~~ 289 (468)
T 2j78_A 210 YVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEF 289 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEEEEEESSSCHHHHHHHHHHHHHHSTHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCCeeecCCCCHHHHHHHHHHHHHhhhceeehheeccccChHHHHH
Confidence 11111 1 2445678889999876543221 1222111 100 001110
Q ss_pred -------CcccchhhhhcCCCCcceEEeecCCCCCC--------------CCCChh-HhHHHHHHHHHHHHHHHHHhcC-
Q 013811 258 -------LDIGTDFVANNLIPGIDFATVHSYPDQWL--------------SSSNDR-DQLSFLNNWLDTHIQDAEHILR- 314 (436)
Q Consensus 258 -------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~--------------~~~~~~-~~~~~~~~~i~~~~~~a~~~~~- 314 (436)
+..+ |. ......+||+++++|..... +..... ...+...+-|+..+....+.++
T Consensus 290 ~~~~~p~~~~~-d~--~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~rY~~ 366 (468)
T 2j78_A 290 AREYLPENYKD-DM--SEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNP 366 (468)
T ss_dssp HGGGSCTTGGG-GH--HHHTCCCSEEEEEEEEEEEEEECTTC-CCEEEECCSSCBCTTCCBCCTHHHHHHHHHHHHHHCC
T ss_pred HHhhCCCCCHH-HH--HHhcCCCCEEEeccccCeEEecCCCCCccccccCCCCccCCCCCccCHHHHHHHHHHHHHHcCC
Confidence 0000 10 01134589999999953210 000000 0000011123333333333355
Q ss_pred CcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEe
Q 013811 315 KPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVL 381 (436)
Q Consensus 315 kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~ 381 (436)
+||+|+|+|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++
T Consensus 367 ~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~gy~~RfGli~ 440 (468)
T 2j78_A 367 PEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNF--EWAEGYSKRFGIVY 440 (468)
T ss_dssp SCEEEEEECCCCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGGGGCCCCSEE
T ss_pred CCEEEEecCCCCCCccccCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEccCcccc--cccCCcccCCceEE
Confidence 89999999997543 12346799999999999999999988889999999999985 36443 55555
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=208.33 Aligned_cols=306 Identities=15% Similarity=0.179 Sum_probs=184.3
Q ss_pred EeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 50 NGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 50 ~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.|+++|-.. ++++.+++||+.||++|+|+||+.+|+ |..++|.||.|+ ++.||++|++|+++||+||+
T Consensus 2 ~G~~y~pe~------w~~~~~~~dl~~mk~~G~N~vR~~if~---W~~~eP~~g~~d---~~~ld~~ld~a~~~Gi~vil 69 (645)
T 1kwg_A 2 LGVCYYPEH------WPKERWKEDARRMREAGLSHVRIGEFA---WALLEPEPGRLE---WGWLDEAIATLAAEGLKVVL 69 (645)
T ss_dssp EEEECCGGG------SCHHHHHHHHHHHHHHTCCEEEECTTC---HHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcCCccc------CCHHHHHHHHHHHHHcCCCEEEEeeec---hhhcCCCCCccC---hHHHHHHHHHHHHCCCEEEE
Confidence 578764322 135889999999999999999996553 667889999998 67889999999999999999
Q ss_pred ecccCCCCCCChhhhhhHHhh--cCCCCC---CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecC
Q 013811 130 SLANNYDSFGGKKQYVNWARS--QGQFLT---SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE 204 (436)
Q Consensus 130 ~l~~~w~~~gg~~~y~~W~~~--~G~~~~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NE 204 (436)
++...-...--...|+.|... .|.... .....+++|..++..+++++.+++| |+++|+|++|+|.||
T Consensus 70 ~~~~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~r--------y~~~p~V~~w~i~NE 141 (645)
T 1kwg_A 70 GTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAER--------YGGLEAVAGFQTDNE 141 (645)
T ss_dssp ECSTTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHH--------HTTCTTEEEEECSSS
T ss_pred eCCCCCCChhHhhcCCceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHH--------hCCCCcEEEEEecCc
Confidence 984320000001123333211 121110 1123367899999999999999999 999999999999999
Q ss_pred CCCCC---CCC---h-----------------------------------------------------------HHHHHH
Q 013811 205 PRCTS---DPS---G-----------------------------------------------------------RTIQAW 219 (436)
Q Consensus 205 p~~~~---~~~---~-----------------------------------------------------------~~~~~w 219 (436)
|.+.. +.+ . +.+..+
T Consensus 142 ~~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~ 221 (645)
T 1kwg_A 142 YGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAF 221 (645)
T ss_dssp TTTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHhcCHHHHHHHhCccccccccCcHhhcCCCCccCCCCChHHHHHHHHHHHHHHHHH
Confidence 98631 111 0 235556
Q ss_pred HHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCC--CChhHhHHH
Q 013811 220 ITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSS--SNDRDQLSF 297 (436)
Q Consensus 220 ~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~--~~~~~~~~~ 297 (436)
++.+++.||++||+++|++...+.+. +.|... ..+.+||+++|.||..+... ...+.+..|
T Consensus 222 ~~~~~~~ir~~~p~~pvt~n~~~~~~---------------~~d~~~--~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~ 284 (645)
T 1kwg_A 222 NRLQVEILRAHAPGKFVTHNFMGFFT---------------DLDAFA--LAQDLDFASWDSYPLGFTDLMPLPPEEKLRY 284 (645)
T ss_dssp HHHHHHHHHHHSTTCEEECEECTTCC---------------SSCHHH--HGGGSSSEEEEECHHHHHHHSCCCHHHHHHT
T ss_pred HHHHHHHHHHhCCCCcEEEeECcCCC---------------CcCHHH--HHhcCcEEEECCCCccccccccccccccccc
Confidence 67788999999999999976543211 112211 23679999999998632110 000000000
Q ss_pred -------HHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC-
Q 013811 298 -------LNNWLDTHIQDAEHILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE- 368 (436)
Q Consensus 298 -------~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~- 368 (436)
...+..+. .+...+||++|.|||..... ..+....+..+++... +.++.. +..|.+||+|.+.
T Consensus 285 ~r~~~~~~~~~~~dl---~r~~~~kP~~i~E~~~~~~~w~~~~~~~~pg~~r~~~---~~~~a~--Ga~~~~~f~w~~~~ 356 (645)
T 1kwg_A 285 ARTGHPDVAAFHHDL---YRGVGRGRFWVMEQQPGPVNWAPHNPSPAPGMVRLWT---WEALAH--GAEVVSYFRWRQAP 356 (645)
T ss_dssp TTTCCTTHHHHHHHH---HHHHTTTCEEEEEECCSCCSSSSSCCCCCTTHHHHHH---HHHHHT--TCSCEEEECSBCCS
T ss_pred cccCchhHHHHHHHH---HHhhcCCCEEEecCCCCCCCCccCCCCCCccHHHHHH---HHHHhc--CCCEEEEeeeccCC
Confidence 01111111 11113699999999865421 1111112222333221 223333 4678899999875
Q ss_pred -CCCCCCCCceEEeCCC--cCHHHHHHHHHHHHHhhh
Q 013811 369 -GMDAFRDGYEIVLSQS--PSTANVITQQAHKLYQIR 402 (436)
Q Consensus 369 -g~~~~~dg~~i~~~~d--~~~~~li~~~~~~~~~~~ 402 (436)
+.+.+. ++++..++ .....-+.+..+.+++++
T Consensus 357 ~~~E~~~--~g~l~~~g~~~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 357 FAQEQMH--AGLHRPDSAPDQGFFEAKRVAEELAALA 391 (645)
T ss_dssp SSTTTTS--CCSBCTTSCBCHHHHHHHHHHHHHHTCC
T ss_pred CCccccc--ccccCCCCCcCHHHHHHHHHHHHHHhhc
Confidence 223332 33444433 234455666677777664
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=194.28 Aligned_cols=280 Identities=15% Similarity=0.180 Sum_probs=186.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 56 Y~~~~eDi~lm~~~G~~~~R~si----~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H-~d-------~P 123 (431)
T 1ug6_A 56 YRRYEEDIALMQSLGVRAYRFSV----AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYH-WD-------LP 123 (431)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhhHHHHHHHHHcCCCEEEccc----CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------CC
Confidence 46789999999999999999943 488899987 9999999999999999999999999999986 32 25
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....| -|.+++..+.|.+|++.+++| |++. |..|.++|||.+.. .+ +.
T Consensus 124 ~~l~~~g--------gw~~~~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 185 (431)
T 1ug6_A 124 LALEERG--------GWRSRETAFAFAEYAEAVARA--------LADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNL 185 (431)
T ss_dssp HHHHTTT--------GGGSHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred cchhhcC--------CCCChHHHHHHHHHHHHHHHH--------hcCC--CceEEEecCcchhhccccccccCCCCccch
Confidence 5655433 267899999999999999999 9985 66899999998621 01 11
Q ss_pred -HHHHH---H---HHHHHHHhhccCCCCEEEeCCCc--ccCCCCCc-----------------cccCCCCC-cc------
Q 013811 214 -RTIQA---W---ITEMASYVKSIDRNHLLEAGLEG--FYGQSTPQ-----------------RKRVNPNL-DI------ 260 (436)
Q Consensus 214 -~~~~~---w---~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~~~-----------------~~~~np~~-~~------ 260 (436)
..++. . ...+.+.+|+ +|+..|.+-... .+. .+.. -....|.. ..
T Consensus 186 ~~~~~a~h~~llAha~Av~~~r~-~~~~~iG~~~~~~~~~P-~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~p 263 (431)
T 1ug6_A 186 EAALRAAHHLLLGHGLAVEALRA-AGARRVGIVLNFAPAYG-EDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPVP 263 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEECCEEC-SCHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCCCCCh-HHHHHHHHHHHHHHHhhhHHHhCCCCCHHHHHhcccCC
Confidence 11111 1 2455688899 898765432211 111 0000 00112210 00
Q ss_pred --cchhhhhcCCCCcceEEeecCCCCCCC------------C-CChh-HhHHHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q 013811 261 --GTDFVANNLIPGIDFATVHSYPDQWLS------------S-SNDR-DQLSFLNNWLDTHIQDAEHILRKPILLAEFGK 324 (436)
Q Consensus 261 --g~df~~~~~~~~iD~~s~H~Y~~~w~~------------~-~~~~-~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~ 324 (436)
-.|. ......+||+++++|...... . .... ...+....-|+..+....+.+++||+|+|.|+
T Consensus 264 ~~~~d~--~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~rY~~Pi~ITENG~ 341 (431)
T 1ug6_A 264 ILSRDL--ELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGA 341 (431)
T ss_dssp CCTTHH--HHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTTCCBCCHHHHHHHHHHHHHHCSSCEEEEEECC
T ss_pred CCHHHH--HHhccCCCEEEEeccccceeccCCCCCccccCCCCCCcCCCCCccChHHHHHHHHHHHHHhCCCEEEEeccC
Confidence 0011 111245899999999642110 0 0000 00001122244444444444788999999999
Q ss_pred CCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 325 SRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 325 ~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++.
T Consensus 342 ~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~gy~~RfGl~~V 406 (431)
T 1ug6_A 342 AYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNF--EWAFGYTRRFGLYYV 406 (431)
T ss_dssp CCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCCC--CGGGGGGSCCCSEEE
T ss_pred CcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEecCcccc--ccccCCCCCccEEEe
Confidence 7543 11346899999999999999999999999999999999984 35443 555553
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-21 Score=193.88 Aligned_cols=280 Identities=14% Similarity=0.184 Sum_probs=186.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 57 Y~~~~eDi~lm~~~G~~~~R~si----~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h-~d-------~P 124 (449)
T 1qox_A 57 YHRVEEDVQLLKDLGVKVYRFSI----SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYH-WD-------LP 124 (449)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhhHHHHHHHHhcCCCeEEecC----cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCC-Cc-------cc
Confidence 36799999999999999999833 48889998 99999999999999999999999999999975 32 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....| -|.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+ +.
T Consensus 125 ~~l~~~g--------gw~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 186 (449)
T 1qox_A 125 QALQDQG--------GWGSRITIDAFAEYAELMFKE--------LGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDL 186 (449)
T ss_dssp HHHHTTT--------GGGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred HHHHhcC--------CCCCchHHHHHHHHHHHHHHH--------hCCC--CceEEEccCCcceeccccccCccCCCcccH
Confidence 6665433 267889999999999999999 9997 78999999998631 01 11
Q ss_pred -HHHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccCCCC-Ccc--------------------ccCCCC------
Q 013811 214 -RTIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYGQST-PQR--------------------KRVNPN------ 257 (436)
Q Consensus 214 -~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~-~~~--------------------~~~np~------ 257 (436)
..++.- ...+.+.+|+.+|+..|.+-... ++..+. +.. ....|.
T Consensus 187 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~ 266 (449)
T 1qox_A 187 QLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWY 266 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEECCCCEEEESSSCHHHHHHHHHHHHTTTHHHHHHHHTSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeecCceeecCCCCHHHHHHHHHHHHHHhHHHhHHhhCCCCChHHHHHH
Confidence 112221 24556788999998766543322 222211 100 011110
Q ss_pred --------CcccchhhhhcCCCCcceEEeecCCCCCCC---C---C---------Chh-H--hHHHHHHHHHHHHHHHHH
Q 013811 258 --------LDIGTDFVANNLIPGIDFATVHSYPDQWLS---S---S---------NDR-D--QLSFLNNWLDTHIQDAEH 311 (436)
Q Consensus 258 --------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~---~---~---------~~~-~--~~~~~~~~i~~~~~~a~~ 311 (436)
+..+ |. ......+||+++++|...... . . ..+ . ..+...+-|+..+....+
T Consensus 267 ~~~~~~p~~~~~-d~--~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~~ 343 (449)
T 1qox_A 267 ENLGYKPPIVDG-DM--ELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRYTAD 343 (449)
T ss_dssp HHHTCCCCCCTT-HH--HHHCCCCSEEEEECSCEEEEEECSSGGGTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHHHH
T ss_pred HhcCCCCCCCHH-HH--HHhccCCCEEEeecCcCeEEecCCCcCCCCCcccccCCCCCcCCCCCccChHHHHHHHHHHHH
Confidence 0000 00 011234899999999532100 0 0 000 0 000011223333433333
Q ss_pred hcCC-cEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEe
Q 013811 312 ILRK-PILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVL 381 (436)
Q Consensus 312 ~~~k-Pv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~ 381 (436)
.+++ ||+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++
T Consensus 344 rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~gy~~RfGlv~ 421 (449)
T 1qox_A 344 KYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNF--EWAEGYGMRFGLVH 421 (449)
T ss_dssp HTTSCCEEEEECCCCCCCCCCTTSSCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGTTSSCCCSEE
T ss_pred HcCCCcEEEEeccCCCCCCcCCCCccCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCCcccc--cccccccCCCCcEE
Confidence 4666 9999999997543 12346789999999999999999999999999999999985 35443 55555
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=194.72 Aligned_cols=280 Identities=14% Similarity=0.164 Sum_probs=188.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 57 Yh~y~eDi~lm~~~G~~~~R~si----~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~P 124 (447)
T 1e4i_A 57 YHRYEEDIRLMKELGIRTYRFSV----SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYH-WD-------LP 124 (447)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhccHHHHHHHHHcCCCeEEecC----cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------cc
Confidence 46799999999999999999833 48889998 99999999999999999999999999999975 33 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|. |.+++..+.|.+|++.+++| |++. |..|.+.|||.+.. .+ +.
T Consensus 125 ~~l~~~gg--------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 186 (447)
T 1e4i_A 125 QALQDAGG--------WGNRRTIQAFVQFAETMFRE--------FHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNL 186 (447)
T ss_dssp HHHHHTTT--------TSSTHHHHHHHHHHHHHHHH--------TBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred HHHHhcCC--------CCCchhHHHHHHHHHHHHHH--------hCCc--ceeEEEecCccccccccccccccCCCccch
Confidence 66654332 67899999999999999999 9997 88999999998631 01 11
Q ss_pred -HHHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccCCCC-Ccc--------------------ccCCCC------
Q 013811 214 -RTIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYGQST-PQR--------------------KRVNPN------ 257 (436)
Q Consensus 214 -~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~-~~~--------------------~~~np~------ 257 (436)
..++.- ...+.+.+|+.+|+..|.+-... .+..+. ++. ....|.
T Consensus 187 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~ 266 (447)
T 1e4i_A 187 QTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWF 266 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEECBCCCEEESSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCceeecCCCCHHHHHHHHHHHHHHhhhhhhhhcCCCCCHHHHHHH
Confidence 111111 24556788999998766543322 222211 100 001110
Q ss_pred --------CcccchhhhhcCCCCcceEEeecCCCCCCC------C-------CChh-H--hHHHHHHHHHHHHHHHHHhc
Q 013811 258 --------LDIGTDFVANNLIPGIDFATVHSYPDQWLS------S-------SNDR-D--QLSFLNNWLDTHIQDAEHIL 313 (436)
Q Consensus 258 --------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~------~-------~~~~-~--~~~~~~~~i~~~~~~a~~~~ 313 (436)
+.. .|.. .....+||+++++|...... . ...+ . ..+....-|+..+.... .+
T Consensus 267 ~~~~~~~p~~~-~d~~--~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~-rY 342 (447)
T 1e4i_A 267 AEQGATVPIQD-GDMD--IIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQ-KY 342 (447)
T ss_dssp HHTTCCCCCCT-THHH--HHTCCCSEEEEECCCCEEEEECTTSTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHGG-GG
T ss_pred hhccccCCCCH-HHHH--HhcCCCCeeEeccccCeEeecCCCCCCCcccccCCCCCCCCcCCcCChHHHHHHHHHHH-hc
Confidence 000 0100 11235899999999642110 0 0000 0 00001122444444444 36
Q ss_pred -CCcEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 314 -RKPILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 314 -~kPv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
++||+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++.
T Consensus 343 ~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~gy~~RfGl~~V 418 (447)
T 1e4i_A 343 GNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNF--EWAEGYNMRFGMIHV 418 (447)
T ss_dssp CSCCEEEEEECCCCCCCCBTTBCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGGGGSCCCSEEE
T ss_pred CCCCEEEEecCCCcccccccCCcccHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCCcccc--ccccCccCCCCeEEe
Confidence 489999999997543 12346889999999999999999999999999999999984 36443 555553
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=196.33 Aligned_cols=284 Identities=18% Similarity=0.263 Sum_probs=189.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+|.+|++.++.+|.+|+++.++||.++++|++ |+ .|.
T Consensus 66 Y~~~~eDi~lm~~~G~~~~R~si----sWsRi~P~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~P~ 133 (454)
T 2o9p_A 66 FHHFKEDVQLMKQLGFLHYRFSV----AWPRIMPAAGIINEEGLLFYEHLLDEIELAGLIPMLTLYH-WD-------LPQ 133 (454)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEC----CHHHHCSSTTCCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------CBH
T ss_pred HHHHHHHHHHHHhcCCceEEecc----cHHhhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC-------ccH
Confidence 46799999999999999999943 4888999999999999999999999999999999999985 32 366
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch-
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG- 213 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~- 213 (436)
|....|. |.+++..+.|.+|++.+++| |++. |..|.+.|||.+.. .+ +.
T Consensus 134 ~L~~~gg--------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~ 195 (454)
T 2o9p_A 134 WIEDEGG--------WTQRETIQHFKTYASVIMDR--------FGER--INWWNTINEPYCASILGYGTGEHAPGHENWR 195 (454)
T ss_dssp HHHHTTG--------GGSTHHHHHHHHHHHHHHHH--------SSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCHH
T ss_pred HHHhcCC--------CCCcchHHHHHHHHHHHHHH--------hCCc--ceeEEEecCcceecccccccCcCCCCcccHH
Confidence 7655442 67899999999999999999 9987 77999999998631 01 11
Q ss_pred HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc--------------------ccCCCCC--c-cc
Q 013811 214 RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR--------------------KRVNPNL--D-IG 261 (436)
Q Consensus 214 ~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~--------------------~~~np~~--~-~g 261 (436)
+.++.- ...+.+.+|+.+|+..|.+-.. ..+..+. +.. ....|.. . .+
T Consensus 196 ~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~ 275 (454)
T 2o9p_A 196 EAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYG 275 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEECCEEEESSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEeecCceeecCCCCHHHHHHHHHHHHHHhhhhhHHhhCCCCChHHHHHHH
Confidence 112221 2455678899999876654222 1222211 100 0112210 0 00
Q ss_pred c-----h-hhh---hcCCCCcceEEeecCCCCCCC----CC---------Chh-H--hHHHHHHHHHHHHHHHHHhcC--
Q 013811 262 T-----D-FVA---NNLIPGIDFATVHSYPDQWLS----SS---------NDR-D--QLSFLNNWLDTHIQDAEHILR-- 314 (436)
Q Consensus 262 ~-----d-f~~---~~~~~~iD~~s~H~Y~~~w~~----~~---------~~~-~--~~~~~~~~i~~~~~~a~~~~~-- 314 (436)
. + |.. ......+||+++++|...... .. ..+ . ..+...+-|+..+....+.++
T Consensus 276 ~~~p~~~~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~~rY~~~ 355 (454)
T 2o9p_A 276 TYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSKG 355 (454)
T ss_dssp GGGGGGTTCCTTHHHHHCCCTTEEEEECCCEEEEEECCSSSSSCEEECCCCSSBCTTSCBCCHHHHHHHHHHHHHTTTTT
T ss_pred hhcCcccCCCHHHHHHhcCCCCEEEEccccceEEeccCCCCCCcccccCCCCccCCCCCccChHHHHHHHHHHHHHhCCC
Confidence 0 0 000 011235899999999642110 00 000 0 001112234444444444476
Q ss_pred CcEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 315 KPILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 315 kPv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
+||+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+. +|..| |++++.
T Consensus 356 ~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~--eW~~gy~~RfGl~~V 429 (454)
T 2o9p_A 356 LPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNF--EWAWGYSKRFGIVHI 429 (454)
T ss_dssp SCEEEEEECCCCCCCEETTEECCHHHHHHHHHHHHHHHHHTTTTCCEEEEEEECSBCCC--CGGGGGGSCCCSEEE
T ss_pred CCEEEEeccCCccCCCCCCCcCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCccccc--ccccCccCcCceEEE
Confidence 89999999997542 11345799999999999999999988889999999999984 36543 555553
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.3e-21 Score=205.70 Aligned_cols=211 Identities=14% Similarity=0.175 Sum_probs=146.0
Q ss_pred CCCC--EEee-CCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCC
Q 013811 29 GDGF--IRTR-GSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSY 105 (436)
Q Consensus 29 ~~~f--v~v~-g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~ 105 (436)
..|| |+++ +..|.+||||++++|+|.|..........+.+.++++|+.||++|+|+||++...+
T Consensus 265 ~~GfR~ie~~~~~~f~LNGk~i~lkGvn~h~d~~~~G~a~~~~~~~~dl~~~K~~G~N~iR~~h~p~------------- 331 (801)
T 3gm8_A 265 PVGFRQLEFNPVSGFLLNGKSLKIKGVCDHHTVGAVGAAVPDDLLHYRLKLLKDMGCNAIRTSHNPF------------- 331 (801)
T ss_dssp EECBCCEEEETTTEEEETTEECCEEEEEECSCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEETTSCC-------------
T ss_pred ecCceEEEEecCCeeEECCEEeEEEccCcCCCCcccCccCCHHHHHHHHHHHHHCCCcEEEecCCCC-------------
Confidence 3465 7777 67899999999999999865433222233568899999999999999999964311
Q ss_pred ChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 106 NEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 106 ~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
+ ++++++|.++||+|+..+...|... +. ..+ + ++...+...+.++.++.|
T Consensus 332 ~-------~~~~dlcDe~GilV~~E~~~~w~~~-~~----------------~~~-~-~~~~~~~~~~~~~~mv~r---- 381 (801)
T 3gm8_A 332 S-------PAFYNLCDTMGIMVLNEGLDGWNQP-KA----------------ADD-Y-GNYFDEWWQKDMTDFIKR---- 381 (801)
T ss_dssp C-------HHHHHHHHHHTCEEEEECCSSSSSC-SS----------------TTS-G-GGTHHHHHHHHHHHHHHH----
T ss_pred c-------HHHHHHHHHCCCEEEECCchhhcCC-CC----------------ccc-c-cHHHHHHHHHHHHHHHHh----
Confidence 1 5789999999999999886655321 00 001 1 234556667889999999
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhh
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV 265 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~ 265 (436)
++|||+|++|.++||+... ...++++|.+.+|++||+++|+.|+..... .. . ..+.
T Consensus 382 ----~rNHPSIi~Ws~gNE~~g~-------~~~~~~~l~~~~k~~DptRpvt~~~~~~~~-~~------~------~~~~ 437 (801)
T 3gm8_A 382 ----DRNHPSIIMWSIGNEVTGA-------TPEIQHNLVSLFHQLDPDRPVTQGGTDPTR-GM------K------TDYQ 437 (801)
T ss_dssp ----HTTCTTEEEEEEEESCSSC-------CHHHHHHHHHHHHHHCTTSCEEEETCCC----------------------
T ss_pred ----cCCCCeEEEEECccCCCCc-------HHHHHHHHHHHHHHHCCCCCEEEccccccc-cc------c------cchh
Confidence 9999999999999999432 146789999999999999999987643200 00 0 0010
Q ss_pred hhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 013811 266 ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKS 325 (436)
Q Consensus 266 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~ 325 (436)
...+.+|++++++|...+. . +.... ++..+||++++|||..
T Consensus 438 --~~~~~~Dv~g~ny~~~~y~---------~-----~~~~~---~~~p~kpi~~sE~~~~ 478 (801)
T 3gm8_A 438 --KKFNYLDIIGFNGNGEEIG---------E-----LEHFH---KNYPTLCAIATEVPHT 478 (801)
T ss_dssp -----CCCSEEEECGGGGSTT---------H-----HHHHH---HHCTTSEEEESSCCBB
T ss_pred --hcccccCEEEeccchhhhh---------h-----hHHHH---HhCCCCcEEEEeCCCc
Confidence 1123489999999865321 0 11111 1126899999999865
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=192.03 Aligned_cols=276 Identities=16% Similarity=0.173 Sum_probs=184.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|. +|.+|++.|+.+|.+|+++.++||.++++|++ |+ .
T Consensus 70 Y~~~~eDi~lm~~~G~~~~R~si----sW~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d-------~ 137 (479)
T 2xhy_A 70 YGHYKEDIKLFAEMGFKCFRTSI----AWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSH-FE-------M 137 (479)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhhhHHHHHHHHHcCCCEEEeeC----CHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCC-CC-------C
Confidence 36789999999999999999943 37788887 78999999999999999999999999999986 32 2
Q ss_pred hhHHhh-cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC--C-C---------
Q 013811 145 VNWARS-QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS--D-P--------- 211 (436)
Q Consensus 145 ~~W~~~-~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~--~-~--------- 211 (436)
|.|... .| -|.+++.++.|.+|++.+++| |++. |..|.++|||.+.. . .
T Consensus 138 P~~l~~~~g--------gw~~~~~~~~F~~ya~~~~~~--------~gd~--V~~w~t~NEp~~~~~~~~gy~~~~~~G~ 199 (479)
T 2xhy_A 138 PLHLVQQYG--------SWTNRKVVDFFVRFAEVVFER--------YKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGV 199 (479)
T ss_dssp BHHHHHHSC--------GGGSTHHHHHHHHHHHHHHHH--------TTTT--CCEEEEETTTTGGGSTTSTTHHHHHHSC
T ss_pred CHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHH--------hCCC--CCcEEEecCcchhhhccccccccccccc
Confidence 556543 22 277899999999999999999 9995 66899999998753 0 0
Q ss_pred --Ch------HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc-------------------ccCC
Q 013811 212 --SG------RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR-------------------KRVN 255 (436)
Q Consensus 212 --~~------~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~-------------------~~~n 255 (436)
.+ ..++.- ...+.+.+|+.+|+..|.+-.. ..+..+. ++. ....
T Consensus 200 ~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IG~~~~~~~~~P~~~~p~D~~aa~~~~~~~~~f~d~~~~G~Y 279 (479)
T 2xhy_A 200 VYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYY 279 (479)
T ss_dssp CGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECCCEEESBSCHHHHHHHHHHTHHHHHHHHHHHHCSC
T ss_pred cCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceeeCCCCCHHHHHHHHHHHHhccchhhheeCCCC
Confidence 00 111111 1345677899999877653221 2222111 100 0111
Q ss_pred CCCcccchhhh--------------hcCCCCcceEEeecCCCCCCCC-----CCh------------h-H--hHHHHHHH
Q 013811 256 PNLDIGTDFVA--------------NNLIPGIDFATVHSYPDQWLSS-----SND------------R-D--QLSFLNNW 301 (436)
Q Consensus 256 p~~~~g~df~~--------------~~~~~~iD~~s~H~Y~~~w~~~-----~~~------------~-~--~~~~~~~~ 301 (436)
|.. ...+.. ....+.+||+++++|....... ... + . ..+....-
T Consensus 280 P~~--~~~~~~~~~~~p~~~~~d~~~i~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~p~~~~t~~gW~i~P~G 357 (479)
T 2xhy_A 280 PSY--VLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVG 357 (479)
T ss_dssp CHH--HHHHHHHHTCCCCCCTTHHHHHHHTCCSSEEEECCCCEEECSSSCC------CTTEECCTTCEECTTCCEECHHH
T ss_pred CHH--HHHHHHhcCCCCCCCHHHHHHHHhcCCCEEEeccccceEeecCCCCCCcccccccccCCCCCCcCCCCCeeccHH
Confidence 100 000000 0011458999999997532110 000 0 0 00001233
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccCCCCCCCC
Q 013811 302 LDTHIQDAEHILRKPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTEGMDAFRD 375 (436)
Q Consensus 302 i~~~~~~a~~~~~kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~g~~~~~d 375 (436)
|+..+....+.+++||+|+|.|+...+ ....+..|.+|++..+..+.+++ .+|..+.|++.|++.|+. +|..
T Consensus 358 l~~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~Wsl~Dn~--eW~~ 435 (479)
T 2xhy_A 358 LRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCV--SFTT 435 (479)
T ss_dssp HHHHHHHHHHHHCSCEEEEECCCCBCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCCEEEECCBTSBCCC--CSSS
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCccCCcCcCCccCcHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccc--cccc
Confidence 444444444458999999999997542 12356899999999999999999 888889999999999984 4655
Q ss_pred C
Q 013811 376 G 376 (436)
Q Consensus 376 g 376 (436)
|
T Consensus 436 G 436 (479)
T 2xhy_A 436 G 436 (479)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=189.42 Aligned_cols=280 Identities=16% Similarity=0.214 Sum_probs=187.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|++|+-+ .|++++|.+ |..|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 70 Yh~y~eDi~lm~~lG~~~yRfsI----sWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------~P 137 (479)
T 1gnx_A 70 YHRWREDVALMAELGLGAYRFSL----AWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYH-WD-------LP 137 (479)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC----CHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhcCHHHHHHHHHcCCCEEEecc----cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------cc
Confidence 47799999999999999999833 488888875 8899999999999999999999999999986 43 36
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|. |.+++..+.|.+|++.+++| |++. |..|.+.|||++.. .+ +.
T Consensus 138 ~~L~~~GG--------w~~r~~v~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 199 (479)
T 1gnx_A 138 QELENAGG--------WPERATAERFAEYAAIAADA--------LGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDP 199 (479)
T ss_dssp HHHHHTTC--------TTSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred HHHHhcCC--------CCCHHHHHHHHHHHHHHHHH--------hCCc--ceeEEEecCcchhhhhhhccCcCCCCccCh
Confidence 66655442 67899999999999999999 9985 77999999998631 01 11
Q ss_pred -HHHHH---H---HHHHHHHhhccC-CCCEEEeCC--CcccCCCC-Ccc--------------------ccCCCC-----
Q 013811 214 -RTIQA---W---ITEMASYVKSID-RNHLLEAGL--EGFYGQST-PQR--------------------KRVNPN----- 257 (436)
Q Consensus 214 -~~~~~---w---~~~~~~~Ir~~D-p~~lV~vG~--~g~~~~~~-~~~--------------------~~~np~----- 257 (436)
..++. . ...+.+.+|+.+ |+..|.+-. ...+..+. ++. ....|.
T Consensus 200 ~~~~~a~h~lllAha~Av~~~r~~~~~~~~IGi~l~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~ 279 (479)
T 1gnx_A 200 VAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKD 279 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEEECCCEEESSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCeEEEeecCceeeeCCCCHHHHHHHHHHHHHHhHHHHHHHhCCCCCHHHHHH
Confidence 11111 1 235567788888 876554322 22222211 110 011120
Q ss_pred ---------CcccchhhhhcCCCCcceEEeecCCCCCCC----------------CC-----Ch---------h-H--hH
Q 013811 258 ---------LDIGTDFVANNLIPGIDFATVHSYPDQWLS----------------SS-----ND---------R-D--QL 295 (436)
Q Consensus 258 ---------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~----------------~~-----~~---------~-~--~~ 295 (436)
+..+ |. ......+||+++++|...... .. .. + . ..
T Consensus 280 ~~~~~~~p~~~~~-d~--~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW 356 (479)
T 1gnx_A 280 TAGLTDWSFVRDG-DL--RLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGW 356 (479)
T ss_dssp TTTTCCCTTSCTT-HH--HHHCCCCSCEEEECSCCEEEC----------------CCCSSTTCTTCCEECCSSCBCTTCC
T ss_pred HHhcCCCCCCCHH-HH--HHhcCCCCEEEEecccCeEEecCCCccccccccccccccccccccccccccCCCCCcCCCCC
Confidence 0000 00 011246899999999642110 00 00 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHhc-CCcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 296 SFLNNWLDTHIQDAEHIL-RKPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 296 ~~~~~~i~~~~~~a~~~~-~kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
+...+-|+..+....+.+ ++||+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|++.|+.
T Consensus 357 ~i~P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~ 436 (479)
T 1gnx_A 357 AVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNF 436 (479)
T ss_dssp BCCHHHHHHHHHHHHHHCTTSCEEEEEECCCCCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC
T ss_pred ccChHHHHHHHHHHHHhcCCCCEEEEcccCCcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEEEecCcccc
Confidence 111223444444444447 899999999987542 12346799999999999999999999999999999999984
Q ss_pred CCCCCCC----ceEEe
Q 013811 370 MDAFRDG----YEIVL 381 (436)
Q Consensus 370 ~~~~~dg----~~i~~ 381 (436)
+|..| |++++
T Consensus 437 --eW~~Gy~~RfGli~ 450 (479)
T 1gnx_A 437 --EWAHGYSKRFGAVY 450 (479)
T ss_dssp --CGGGGGGCCCCSEE
T ss_pred --chhccccCCCCeEE
Confidence 45443 45554
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=191.12 Aligned_cols=282 Identities=16% Similarity=0.189 Sum_probs=187.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+++++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 53 Yh~y~eDi~lm~~~G~~~~R~si----sWsRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~P 120 (468)
T 1pbg_A 53 YHKYPVDLELAEEYGVNGIRISI----AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FD-------TP 120 (468)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------CB
T ss_pred cccCHHHHHHHHHhCCCEEEecc----CHhhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------cC
Confidence 47899999999999999999833 48888887 58999999999999999999999999999976 33 35
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC----C
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP----S 212 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~----~ 212 (436)
.|....|. |.+++..+.|.+|++.+++| |++ |..|.+.|||.+.. .+ +
T Consensus 121 ~~L~~~gg--------w~~r~~~~~F~~ya~~~~~~--------~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 181 (468)
T 1pbg_A 121 EALHSNGD--------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181 (468)
T ss_dssp HHHHHTTG--------GGSTHHHHHHHHHHHHHHHH--------CTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSC
T ss_pred HHHHhcCC--------CCChHHHHHHHHHHHHHHHH--------hCC---CCEEEEecCchhhhcccccccccCCccccc
Confidence 66654442 67889999999999999999 998 88999999998531 01 1
Q ss_pred h-HHHHHH------HHHHHHHhhccCCCCEEEe--CCCcccC-CC-CCcc--------------------ccCCCCC--c
Q 013811 213 G-RTIQAW------ITEMASYVKSIDRNHLLEA--GLEGFYG-QS-TPQR--------------------KRVNPNL--D 259 (436)
Q Consensus 213 ~-~~~~~w------~~~~~~~Ir~~Dp~~lV~v--G~~g~~~-~~-~~~~--------------------~~~np~~--~ 259 (436)
. ..++.- ...+.+.+|+.+|+..|.+ .....+. .+ .++. ....|.. .
T Consensus 182 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~l~~~~~~P~~~~~p~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~ 261 (468)
T 1pbg_A 182 LAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTME 261 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCCEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcccccCCCCCHHHHHHHHHHHHHHHhhhhhHhhCCCCCHHHHH
Confidence 1 111111 2355678889999876643 2222233 21 1110 0111210 0
Q ss_pred -ccc-----h----hhh----hcC--CCCcceEEeecCCCCCCCC----C-------C--------h------------h
Q 013811 260 -IGT-----D----FVA----NNL--IPGIDFATVHSYPDQWLSS----S-------N--------D------------R 292 (436)
Q Consensus 260 -~g~-----d----f~~----~~~--~~~iD~~s~H~Y~~~w~~~----~-------~--------~------------~ 292 (436)
.+. . |.. ... .+.+||+++++|....... . . . +
T Consensus 262 ~~~~~~~~p~~~~~~~~~d~~~i~~~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (468)
T 1pbg_A 262 GVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVP 341 (468)
T ss_dssp HHHHHHHHHCCCCCCCHHHHHHHHHHTTCCCEEEEECSCCEEEECCCCCCBC-----------CCEETTTEEECCCTTCC
T ss_pred HHHhcccCcccccCCCHHHHHHHhCCCCCCCEEEEecccCeEeecccCccccccCCCcccccccccccccccccCCCCCC
Confidence 000 0 000 001 1236999999996431100 0 0 0 0
Q ss_pred -HhH--HHHHHHHHHHHHHHHHhc--CCcEEEEecCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeec
Q 013811 293 -DQL--SFLNNWLDTHIQDAEHIL--RKPILLAEFGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFW 363 (436)
Q Consensus 293 -~~~--~~~~~~i~~~~~~a~~~~--~kPv~i~EfG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W 363 (436)
... +....-|+..+....+.+ ++||+|+|.|+...+ ....+..|.+|++..+..+.+++++|..+.|++.|
T Consensus 342 ~t~~gW~i~P~Gl~~~L~~~~~rY~~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~W 421 (468)
T 1pbg_A 342 RTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIW 421 (468)
T ss_dssp -----CCCCTHHHHHHHHHHHHHCTTCCCEEEEECCCCBCCCEETTEECCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCcccccChHHHHHHHHHHHHHcCCCCCEEEEeCCCCCcCcccCCCcCcHHHHHHHHHHHHHHHHHHHcCCCEEEEEEe
Confidence 000 001233555555554457 899999999997542 11345799999999999999999999999999999
Q ss_pred ccccCCCCCCCCC----ceEEe
Q 013811 364 QLLTEGMDAFRDG----YEIVL 381 (436)
Q Consensus 364 ~~~~~g~~~~~dg----~~i~~ 381 (436)
++.|+. +|..| |++++
T Consensus 422 Sl~Dn~--eW~~Gy~~RfGl~~ 441 (468)
T 1pbg_A 422 SLMDVF--SWSNGYEKRYGLFY 441 (468)
T ss_dssp CSBCCC--BTTTBTTSBCCSEE
T ss_pred cccccc--chhcCCCCCcceEE
Confidence 999984 46544 45555
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=190.26 Aligned_cols=285 Identities=15% Similarity=0.165 Sum_probs=181.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCC------------------CCC------------hhhhhhHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPG------------------SYN------------EQMFKGLDFV 116 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg------------------~~~------------~~~l~~lD~~ 116 (436)
-+.+++|++.|+++|+|++|+-+ .|++++|.+| .+| ++.++.+|.+
T Consensus 59 Y~~y~eDi~lm~~~G~~~~R~si----sWsRi~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~~ 134 (481)
T 1qvb_A 59 WNLNQNDHDLAEKLGVNTIRVGV----EWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEM 134 (481)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccEecc----chhhhCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHHH
Confidence 46789999999999999999832 4888999888 899 9999999999
Q ss_pred HHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCC----CCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 117 IAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQ----FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 117 i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~----~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
|+.+.++||.++++|.+ |+ .|.|....|. .......=|.+++..+.|.+|.+.+++| |++
T Consensus 135 id~l~~~Gi~p~vtL~H-~~-------lP~~L~~~~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~--------~gd 198 (481)
T 1qvb_A 135 YKDWVERGRKLILNLYH-WP-------LPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWK--------MGE 198 (481)
T ss_dssp HHHHHTTTCEEEEESCC-SC-------CBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHH--------HTT
T ss_pred HHHHHHCCCEEEEEeCC-CC-------CCHHHHhcCCcccccccccCCCcCCchHHHHHHHHHHHHHHH--------hCC
Confidence 99999999999999975 32 2344332110 0000111267888999999999999999 998
Q ss_pred CCcEEEEEeecCCCCCC----------C-C---Ch-HHHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccCCCCC
Q 013811 193 DPTIMAWELMNEPRCTS----------D-P---SG-RTIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYGQSTP 249 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~----------~-~---~~-~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~~ 249 (436)
. |..|.++|||++.. . + +. ..++.- ...+++.+|+.+|+ .|.+-... ++..+.+
T Consensus 199 ~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~~llAHa~A~~~~r~~~~~-~IGi~~~~~~~~P~~~d 275 (481)
T 1qvb_A 199 L--PVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKK-PVGLIYAFQWFELLEGP 275 (481)
T ss_dssp S--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CEEEEEECCEEECSSSC
T ss_pred C--ccEEEEecccchhhcccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC-cEEEEeeCCeeecCCCC
Confidence 7 77999999998531 0 1 11 111111 23456778888888 44432211 1221110
Q ss_pred -cc-----ccCCCCCcc----c-----chhhhhcCCCCcceEEeecCCCCCCC----------C----------C--Chh
Q 013811 250 -QR-----KRVNPNLDI----G-----TDFVANNLIPGIDFATVHSYPDQWLS----------S----------S--NDR 292 (436)
Q Consensus 250 -~~-----~~~np~~~~----g-----~df~~~~~~~~iD~~s~H~Y~~~w~~----------~----------~--~~~ 292 (436)
.. ...|-.+.. | ..|... ....+||+++++|...... . . ..+
T Consensus 276 ~~aa~~~~~~~~~~fld~~~~G~yp~~~~~~~~-~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (481)
T 1qvb_A 276 AEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRD-LANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENP 354 (481)
T ss_dssp CSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTT-TSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCB
T ss_pred HHHHHHHHHHHhhhhhHHHhCCCCCCCCCCCHH-HcCCCceEEEecccceEEeccCcccccCCccccccccccccCCCCC
Confidence 00 000000000 0 000000 2346899999999632110 0 0 000
Q ss_pred -H--hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 293 -D--QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 293 -~--~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
. ..+...+-|+..+....+.+++||+|+|.|+... .+..|..|++..+..+.+++++|..+.|++.|++.|+.
T Consensus 355 ~t~~gW~i~P~GL~~~L~~~~~rY~~Pi~ITENG~~~~----~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~ 430 (481)
T 1qvb_A 355 CSDFGWEVYPEGLYLLLKELYNRYGVDLIVTENGVSDS----RDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNY 430 (481)
T ss_dssp BCTTCCBCCTHHHHHHHHHHHHHHCCEEEEEECCCCCT----TCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC
T ss_pred cCCCCCccchHHHHHHHHHHHHHhCCCEEEEeCCCCcc----ccHHHHHHHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence 0 0011122344444444444799999999999754 34589999999999999999998899999999999984
Q ss_pred CCCCCCC----ceEEe
Q 013811 370 MDAFRDG----YEIVL 381 (436)
Q Consensus 370 ~~~~~dg----~~i~~ 381 (436)
+|..| |++++
T Consensus 431 --EW~~Gy~~RfGLv~ 444 (481)
T 1qvb_A 431 --EWAQGFRQKFGLVM 444 (481)
T ss_dssp --CGGGTTSSCCCSEE
T ss_pred --cccCCCCCCceEEE
Confidence 35443 45555
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=186.73 Aligned_cols=284 Identities=16% Similarity=0.183 Sum_probs=185.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|++|+-+ .|++++|.. |.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 57 Yhry~eDi~l~~~lG~~~~R~si----~W~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------lP 124 (444)
T 4hz8_A 57 YHRYEQDLDLMRQLGLKTYRFSI----AWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYH-WD-------LP 124 (444)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhHHHHHHHHHhcCCCEEEEec----cHHHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------CC
Confidence 47899999999999999999833 488888875 8899999999999999999999999999976 43 25
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---C-
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---S- 212 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~- 212 (436)
.|....|+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+ +
T Consensus 125 ~~L~~~GG--------W~nr~~v~~F~~Ya~~~~~~--------~gdr--Vk~W~T~NEp~~~~~~gy~~g~~~Pg~~~~ 186 (444)
T 4hz8_A 125 QWVEDEGG--------WLSRESASRFAEYTHALVAA--------LGDQ--IPLWVTHNEPMVTVWAGYHMGLFAPGLKDP 186 (444)
T ss_dssp HHHHHTTG--------GGSTHHHHHHHHHHHHHHHH--------HGGG--CSEEEEEECHHHHHHHHHTSCSSTTCCCCG
T ss_pred HHHhhCcC--------CCChHHHHHHHHHHHHHHHH--------hCcc--CCeEEEccCcchhhhccccccccccccCCH
Confidence 66655443 78899999999999999999 9985 67899999998531 01 1
Q ss_pred hHHHHHH------HHHHHHHhhccCCC-CEEEeCCC--cccCCCC-Ccc--------------------ccCCCCC---c
Q 013811 213 GRTIQAW------ITEMASYVKSIDRN-HLLEAGLE--GFYGQST-PQR--------------------KRVNPNL---D 259 (436)
Q Consensus 213 ~~~~~~w------~~~~~~~Ir~~Dp~-~lV~vG~~--g~~~~~~-~~~--------------------~~~np~~---~ 259 (436)
...++.- ...+.+.+|+..|+ ..|.+-.. ..+..+. +.. ....|.. .
T Consensus 187 ~~~~~~~h~~llAha~Av~~~r~~~~~~~~iG~~~~~~~~~P~~~~p~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~ 266 (444)
T 4hz8_A 187 TLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMA 266 (444)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEEECCEEESSSCHHHHHHHHHHHHHHHHTTHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEecCcceeeCCCCHHHHHHHHHHHHHHhHHHHHHHhCCCCCHHHHHH
Confidence 1222222 23456778888888 55543221 1222111 100 0111110 0
Q ss_pred cc---chhh---hhcCCCCcceEEeecCCCCCC-------------CCCCh-hHhHHHHHHHHHHHHHHHHHhcC-CcEE
Q 013811 260 IG---TDFV---ANNLIPGIDFATVHSYPDQWL-------------SSSND-RDQLSFLNNWLDTHIQDAEHILR-KPIL 318 (436)
Q Consensus 260 ~g---~df~---~~~~~~~iD~~s~H~Y~~~w~-------------~~~~~-~~~~~~~~~~i~~~~~~a~~~~~-kPv~ 318 (436)
.+ ..|. .......+||+++++|..... +.... +-..+...+-|+..+....+.++ +||+
T Consensus 267 ~~~~~p~~~~~d~~~i~~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~~rY~~~Pi~ 346 (444)
T 4hz8_A 267 YPNLPEFIAPEDMQTISAPIDFLGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIY 346 (444)
T ss_dssp CTTGGGGCCTTHHHHHTSCCSEEEEEESCCEEEEECSSTTSEEEECCCSSBCTTCCBCCHHHHHHHHHHHHHHHCSCCEE
T ss_pred HHhcCCCCCHHHHHHhcCCCCEEEEECCcCceeccCCCCCcccccCCCCCCCCCccccChHHHHHHHHHHHHHcCCCCEE
Confidence 00 0000 000123589999999953210 00000 00000111223333433333366 5999
Q ss_pred EEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEeC
Q 013811 319 LAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVLS 382 (436)
Q Consensus 319 i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~ 382 (436)
|+|.|+...+ ....+..|.+|++..+..+.+++.+|..+.|++.|++.|+. +|..| |++++.
T Consensus 347 ItENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~Gy~~RfGlv~V 417 (444)
T 4hz8_A 347 ITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNF--EWAEGYSKRFGIIYV 417 (444)
T ss_dssp EEEECCCCCCCCCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGGGGCCCCSEEE
T ss_pred EecCCCCcCCCcCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEecCcccc--chhhcccCcCCeEEE
Confidence 9999997542 11346799999999999999999999999999999999984 46544 555553
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-21 Score=194.83 Aligned_cols=282 Identities=14% Similarity=0.142 Sum_probs=182.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCC---CCC---------------------------hhhhhhHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPG---SYN---------------------------EQMFKGLDFV 116 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg---~~~---------------------------~~~l~~lD~~ 116 (436)
-+.+++|++.|+++|+|++|+-+ .|++++|.+| .+| ++.++.+|.+
T Consensus 59 Y~~y~eDi~l~~~lG~~~~R~si----~WsRI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~~ 134 (473)
T 3apg_A 59 WHLYKQDHDIAEKLGMDCIRGGI----EWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKI 134 (473)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCCEEEEec----chhhccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHHH
Confidence 46789999999999999999832 4888999999 899 9999999999
Q ss_pred HHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCC----CCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 117 IAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQ----FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 117 i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~----~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
|+.++++||+++++|.+ |+ .|.|....|. .......=|.+++....|.+|.+.+++| |++
T Consensus 135 id~l~~~Gi~pivtL~H-~~-------lP~wl~d~~~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~--------~gd 198 (473)
T 3apg_A 135 YSDWKERGKTFILNLYH-WP-------LPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYH--------LDD 198 (473)
T ss_dssp HHHHHTTTCEEEEESCC-SC-------CCTTTBCHHHHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHH--------HGG
T ss_pred HHHHHHCCCEEEEEeCC-CC-------CCHHHHhCCCccccccCCccCCCCCccHHHHHHHHHHHHHHH--------hCC
Confidence 99999999999999975 32 2444432210 0001122377899999999999999999 998
Q ss_pred CCcEEEEEeecCCCCCC----------C-C---Ch-HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCCC
Q 013811 193 DPTIMAWELMNEPRCTS----------D-P---SG-RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQSTP 249 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~----------~-~---~~-~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~~ 249 (436)
. |..|.++|||.+.. . + +. ..++.- ...+++.||+.. ...|.+-.. .++..+ +
T Consensus 199 ~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~lllAHa~A~~~~r~~~-~~~IGi~~~~~~~~P~~-~ 274 (473)
T 3apg_A 199 L--VDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYS-EKSVGVIYAFAWHDPLA-E 274 (473)
T ss_dssp G--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTSC-CSEEEEEEECCEEEESS-G
T ss_pred c--ceEEEEecCcchhhcccccccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeeCCeeecCC-C
Confidence 7 77999999997531 0 1 11 111111 234567788874 444432221 112111 0
Q ss_pred ccccCCCCCcc----cchhhhhcC--CCCcceEEeecCCCCCCC----------C------------CChhH---hHHHH
Q 013811 250 QRKRVNPNLDI----GTDFVANNL--IPGIDFATVHSYPDQWLS----------S------------SNDRD---QLSFL 298 (436)
Q Consensus 250 ~~~~~np~~~~----g~df~~~~~--~~~iD~~s~H~Y~~~w~~----------~------------~~~~~---~~~~~ 298 (436)
. +|.-.. ..+|..+.. ...+||+++++|...... . ...+. ..+..
T Consensus 275 ~----~~~d~~aa~~~~~~~~dp~~d~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~ 350 (473)
T 3apg_A 275 E----YKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMY 350 (473)
T ss_dssp G----GHHHHHHHHHHHHHHHHHHHHTTCCSCEEEECCCEEEEEESSSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCC
T ss_pred C----CHHHHHHHHHHhhhcCceeEecCCCCeeEEcCccceEEecCCccccCCCCcccccccccccCCCCCcCCCCCccc
Confidence 0 110000 000100000 346899999999632110 0 00000 00111
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC--
Q 013811 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG-- 376 (436)
Q Consensus 299 ~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg-- 376 (436)
.+-|+..+....+.+++||+|+|.|+... .+..|..|++..+..+.+++++|..+.|++.|++.|+. +|..|
T Consensus 351 P~GL~~~L~~~~~rY~~Pi~ITENG~~~~----~D~~Ri~yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn~--EW~~Gy~ 424 (473)
T 3apg_A 351 PEGLENLLKYLNNAYELPMIITENGMADA----ADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNY--EWAQGFR 424 (473)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECCCCCT----TCSSHHHHHHHHHHHHHHHHTTTCCEEEEEESCSBCCC--CGGGGGG
T ss_pred HHHHHHHHHHHHHHhCCeEEEEecCCCCC----CchHHHHHHHHHHHHHHHHHHcCCCEEEEEEecccccC--ccccccc
Confidence 23344444444444788999999998754 34579999999999999999999899999999999984 36544
Q ss_pred --ceEEeC
Q 013811 377 --YEIVLS 382 (436)
Q Consensus 377 --~~i~~~ 382 (436)
|+++..
T Consensus 425 ~RfGL~~V 432 (473)
T 3apg_A 425 MRFGLVYV 432 (473)
T ss_dssp SCCCSEEE
T ss_pred CcCCeEEe
Confidence 555553
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-20 Score=185.97 Aligned_cols=275 Identities=15% Similarity=0.220 Sum_probs=182.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.||++|+|++|+-+ .|++++|.. |.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 65 Yhry~eDi~Lm~elG~~~yRfSI----sWsRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H-~d-------lP 132 (458)
T 3ta9_A 65 YHLYREDIELMKEIGIRSYRFST----SWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYH-WD-------LP 132 (458)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred HHhHHHHHHHHHHcCCCEEEecC----cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecC-CC-------CC
Confidence 47899999999999999999832 488888876 8999999999999999999999999999976 43 25
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+ +.
T Consensus 133 ~~L~~~GG--------W~nr~~v~~F~~YA~~~f~~--------fgdr--Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~ 194 (458)
T 3ta9_A 133 QALQDKGG--------WTNRDTAKYFAEYARLMFEE--------FNGL--VDLWVTHNEPWVVAFEGHAFGNHAPGTKDF 194 (458)
T ss_dssp HHHHTTTG--------GGSHHHHHHHHHHHHHHHHH--------TTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred HhHHhcCC--------CCCHHHHHHHHHHHHHHHHH--------hcCc--CCEEEEecCcchhhcccccccccCCCcCCH
Confidence 55554343 78999999999999999999 9986 67899999998531 01 11
Q ss_pred -HHHHHH------HHHHHHHhhccCCCCEEEeCCC--cccCCCC-Ccc--------------------ccCCCC------
Q 013811 214 -RTIQAW------ITEMASYVKSIDRNHLLEAGLE--GFYGQST-PQR--------------------KRVNPN------ 257 (436)
Q Consensus 214 -~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~--g~~~~~~-~~~--------------------~~~np~------ 257 (436)
+.++.- ...+.+.+|+..|+..|.+-.. .++..+. ++. ....|.
T Consensus 195 ~~~~~~~h~~llAha~Av~~~r~~~~~~~IG~~~~~~~~~P~~~~p~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~ 274 (458)
T 3ta9_A 195 KTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIY 274 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEECCCEEESSSCHHHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCCceecCCCCHHHHHHHHHHHHHhhchhhhhhhCCCCCHHHHHHH
Confidence 112221 2344677888888776653221 1222111 110 011110
Q ss_pred --------CcccchhhhhcCCCCcceEEeecCCCCCCC----------------CCChhH-hHHHHHHHHHHHHHHHHHh
Q 013811 258 --------LDIGTDFVANNLIPGIDFATVHSYPDQWLS----------------SSNDRD-QLSFLNNWLDTHIQDAEHI 312 (436)
Q Consensus 258 --------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~----------------~~~~~~-~~~~~~~~i~~~~~~a~~~ 312 (436)
+..+ |. ......+||+++++|...... ...... ..+...+-|+..+....+.
T Consensus 275 ~~~~~~p~~~~~-d~--~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~~r 351 (458)
T 3ta9_A 275 EQNLGAFTTQPG-DM--DIISRDIDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKE 351 (458)
T ss_dssp HHHSCCCCCCTT-HH--HHHTCCCSEEEEECCCCEEEEECCCSSSSCEEECCCC-CCBCTTCCBCCTHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCHH-HH--HHhCCCCCEEEEECCcCeEEecCCCCCCCCCccccCCCCCcCCCCCeecHHHHHHHHHHHHHH
Confidence 0000 00 011246799999999632100 000000 0001112233334333334
Q ss_pred cC-CcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC
Q 013811 313 LR-KPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 313 ~~-kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
++ +||+|+|.|+...+ ....+..|.+|++..+..+.+++.+|..+.|++.|++.|+. +|..|
T Consensus 352 Y~~~Pi~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~--eW~~G 419 (458)
T 3ta9_A 352 YTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNF--EWAYG 419 (458)
T ss_dssp TCCSCEEEEEECCCBCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHSSCCEEEEEEECSBCCC--BGGGB
T ss_pred cCCCCEEEecCCCCcCCccccCCCcCCHHHHHHHHHHHHHHHHHHHcCCeEEEEEeeeccccc--chhhc
Confidence 65 89999999997542 12346899999999999999999999999999999999974 45443
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=181.19 Aligned_cols=176 Identities=12% Similarity=0.175 Sum_probs=120.3
Q ss_pred HHHHHHhhccccccc-ccCCCCCEEeeCCeE--EECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEE
Q 013811 11 FLAFFIHRQSFNVLH-VEAGDGFIRTRGSHF--LLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVART 87 (436)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~fv~v~g~~f--~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi 87 (436)
|+.+|+++.+.++.. +......++++++++ ++||||+++.|.+.|.... . ....+++++.||++|+|+||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~---y---~r~~~~~W~~mKa~G~NtVr~ 92 (552)
T 3u7v_A 19 LALALVCGPLASGAHAADAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSSA---W---PSQMAKVWPAIEKVGANTVQV 92 (552)
T ss_dssp -----------------CCCCCEEEEETTEEEEEETTEEECEEEEECCTTCC---S---GGGHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhhccccccccccccCCeEEEECCeEEEEECCEEEEEEEEEeCCCCC---c---hhhhHHHHHHHHHhCCCEEEE
Confidence 333444444444322 223456788988876 7899999999999874421 1 145678888999999999999
Q ss_pred ccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCC---CCC-----
Q 013811 88 WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLT---SDD----- 159 (436)
Q Consensus 88 ~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~---~~~----- 159 (436)
.+. |..++|.||+|| |+.||++|+.|+++||+||+.++..|. .||....|.|........+ +.+
T Consensus 93 ~V~----W~~hEP~~G~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~-~ggta~~P~WL~~d~~~~P~vrt~dG~~~~ 164 (552)
T 3u7v_A 93 PIA----WEQIEPVEGQFD---FSYLDLLLEQARERKVRLVLLWFGTWK-NSSPSYAPEWVKLDDKRFPRLIKDDGERSY 164 (552)
T ss_dssp EEE----HHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEEEEE-TTBCTTSCHHHHTCTTTSCEEECTTSCEEE
T ss_pred Eeh----hhccCCCCCccC---hhhHHHHHHHHHHCCCEEEEEeccccc-cCCCcCCCchhhcCcccCceeECCCCcEee
Confidence 763 667899999999 677999999999999999999877775 4665456889863211000 000
Q ss_pred -CCCCChHH----HHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCC
Q 013811 160 -DFFRNPVV----KGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCT 208 (436)
Q Consensus 160 -~f~~~~~~----~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~ 208 (436)
..+.+|.. ++++.+.++.|++| |+++|+|++|++.||+.+.
T Consensus 165 ~~sp~~p~yl~a~r~~~~~l~~~La~r--------~~~~p~VI~wQIeNEyG~~ 210 (552)
T 3u7v_A 165 SMSPLAKSTLDADRKAFVALMTHLKAK--------DAAQKTVIMVQVENETGTY 210 (552)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHHHHHH--------HTTTCCEEEEEEEESCSBS
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHH--------hCCCCcEEEEEecccCCCC
Confidence 11234544 67777777788888 9999999999999999865
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=183.81 Aligned_cols=281 Identities=15% Similarity=0.174 Sum_probs=187.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++|++.|+++|+|++|+-+ .|++++|. +|.+|++.++.+|.+|+++.++||.++++|++ |+ .
T Consensus 54 Yhry~eDi~lm~~lG~~~~Rfsi----~W~Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H-~d-------l 121 (479)
T 4b3l_A 54 YHQIESDLTLLASLGHNSYRTSI----QWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHH-FD-------L 121 (479)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEC----CHHHHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCS-SC-------C
T ss_pred HHHHHHHHHHHHHcCCCEEEeec----CHHHhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecC-CC-------c
Confidence 47899999999999999999832 48889998 78999999999999999999999999999986 43 2
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP--- 211 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~--- 211 (436)
|.|.... |+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+
T Consensus 122 P~~L~~~yGG--------W~nr~~vd~F~~YA~~~f~~--------fgdr--Vk~WiT~NEp~~~~~~gy~~G~~~Pg~~ 183 (479)
T 4b3l_A 122 PIALYQAYGG--------WESKHVVDLFVAFSKVCFEQ--------FGDR--VKDWFVHNEPMVVVEGSYLMQFHYPAIV 183 (479)
T ss_dssp BHHHHHHHCG--------GGCHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCC
T ss_pred CHHHHHhcCC--------cCCHHHHHHHHHHHHHHHHH--------hCcc--CCeEEEccCcchhhhccccccccCCCCC
Confidence 5666544 43 78999999999999999999 9985 67899999998531 11
Q ss_pred Ch-HHHHHH------HHHHHHHhhccC---CCCEEEeCCCc--ccCCCC-Ccc--------------------ccCCCCC
Q 013811 212 SG-RTIQAW------ITEMASYVKSID---RNHLLEAGLEG--FYGQST-PQR--------------------KRVNPNL 258 (436)
Q Consensus 212 ~~-~~~~~w------~~~~~~~Ir~~D---p~~lV~vG~~g--~~~~~~-~~~--------------------~~~np~~ 258 (436)
+. ..++.- ...+.+.+|+.. |+-.|.+-... ++..+. ++. ....|..
T Consensus 184 ~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~~~D~~Aa~~~~~~~~~~f~dp~~~G~YP~~ 263 (479)
T 4b3l_A 184 DGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQSEADMAAAHFAELWNNDLFMEAAVHGKFPEE 263 (479)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSSSEEEEEECCCCEEESSSSHHHHHHHHHHHHHHTHHHHHHHHHSSCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCceeecCCCCHHHHHHHHHHHHHhhhhHHHHHhCCCCCHH
Confidence 11 112222 234467788887 77666543221 222111 110 0011100
Q ss_pred cccchhhhh--------------cCCCCcceEEeecCCCCCC------C--C--------------CChh-HhH---HHH
Q 013811 259 DIGTDFVAN--------------NLIPGIDFATVHSYPDQWL------S--S--------------SNDR-DQL---SFL 298 (436)
Q Consensus 259 ~~g~df~~~--------------~~~~~iD~~s~H~Y~~~w~------~--~--------------~~~~-~~~---~~~ 298 (436)
...+... ...+.+||+++++|..... . . ...+ ... +..
T Consensus 264 --~~~~~~~~~~~p~~~~~d~~~ik~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~t~~~gW~i~ 341 (479)
T 4b3l_A 264 --LVAVLKKDGVLWQSTPEELALIAENRVDYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIY 341 (479)
T ss_dssp --HHHHHHHTTCCCCCCHHHHHHHHHCCCSEEEEECSSCEEEECCSCCCSCCSSCCGGGSCEECCCTTCCEEGGGTEECC
T ss_pred --HHHHHHhcCCCCCCCHHHHHHhhCCCCCEEEEECCcCcEeecCCCCcccCCCcccccccccccCCCCCcCCCCCCeec
Confidence 0000000 0113589999999963210 0 0 0000 001 111
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEecCCCCCC--------CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 299 NNWLDTHIQDAEHIL-RKPILLAEFGKSRKD--------PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 299 ~~~i~~~~~~a~~~~-~kPv~i~EfG~~~~~--------~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
..-|+..+....+.+ ++||+|+|.|+...+ ....+..|.+|++..+..+.+++.+|..+.|++.|++.|+.
T Consensus 342 P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~~~~g~i~D~~Ri~yl~~hl~~v~~Ai~dGv~v~GY~~WSl~Dnf 421 (479)
T 4b3l_A 342 PEAVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIEAGSNCFGYHVWTPIDGW 421 (479)
T ss_dssp THHHHHHHHHHHHHSTTCCEEEEEECCCBSCGGGGBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBCCC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEeCCCCCCCccccccccCCcCCHHHHHHHHHHHHHHHHHHHcCCCEEEEEEecccccc
Confidence 222455555444447 899999999997431 12356789999999999999999999999999999999984
Q ss_pred CCCCCCC----ceEEe
Q 013811 370 MDAFRDG----YEIVL 381 (436)
Q Consensus 370 ~~~~~dg----~~i~~ 381 (436)
+|..| |++++
T Consensus 422 --eW~~Gy~~RfGlv~ 435 (479)
T 4b3l_A 422 --SWLNAYKNRYGLVE 435 (479)
T ss_dssp --CGGGTTSSBCCSEE
T ss_pred --hhhhcccCCCCeEE
Confidence 45544 45554
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=184.90 Aligned_cols=301 Identities=19% Similarity=0.255 Sum_probs=184.8
Q ss_pred EEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCE
Q 013811 47 YFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIK 126 (436)
Q Consensus 47 ~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~ 126 (436)
-++.|+++|-... .++.+++||+.||++|+|+||+.+| .|..++|.+|.|+ |+.||++|++|+++||+
T Consensus 8 ~~~~G~~y~pe~w------~~~~~~~Dl~~mk~~G~n~vr~~if---~W~~~eP~~g~~~---f~~ld~~i~~~~~~Gi~ 75 (675)
T 3tty_A 8 KIWYGGDYNPEQW------DKATMEEDMRMFNLAGIDVATVNVF---SWAKIQRDEVSYD---FTWLDDIIERLTKENIY 75 (675)
T ss_dssp SCEEEEECCGGGS------CHHHHHHHHHHHHHHTCCEEEECSS---CHHHHBSSSSCBC---CHHHHHHHHHHHHTTCE
T ss_pred CceEeeeCChhhC------CHHHHHHHHHHHHHcCCCEEEEeee---chhhhCCcCCccC---HHHHHHHHHHHHHCCCE
Confidence 3667888653322 3578999999999999999999765 3778899999998 88999999999999999
Q ss_pred EEEecccCCCCCCChhhhhhHHhh--cCCCC---CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 127 LILSLANNYDSFGGKKQYVNWARS--QGQFL---TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 127 vil~l~~~w~~~gg~~~y~~W~~~--~G~~~---~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
|||.+.+.....--...|+.|... .|... ......+++|..++++.++++.+++| |+++|+|++|++
T Consensus 76 vil~~~~~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~r--------y~~~p~Vi~w~v 147 (675)
T 3tty_A 76 LCLATSTGAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAER--------YKDHPQIVMWHV 147 (675)
T ss_dssp EEEECCTTSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHH--------TTTCTTEEEEEC
T ss_pred EEEeCCCCCCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHH--------hCCCCcEEEEEE
Confidence 999986531000000122333211 12211 12234578999999999999999999 999999999999
Q ss_pred ecCCCCCC-C------------------------------------------C---C---------------------hH
Q 013811 202 MNEPRCTS-D------------------------------------------P---S---------------------GR 214 (436)
Q Consensus 202 ~NEp~~~~-~------------------------------------------~---~---------------------~~ 214 (436)
.||+.+.. + + . .+
T Consensus 148 ~NE~g~~~y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~ 227 (675)
T 3tty_A 148 SNEYGGYCYCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSD 227 (675)
T ss_dssp SSSCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHH
T ss_pred ccccCCCcCCHHHHHHHHHHHHHHhcCHHHHHHHhCcccccCccCCHHHhcCCccccccccccccCChHHHHHHHHHHHH
Confidence 99998531 0 0 0 01
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHh
Q 013811 215 TIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQ 294 (436)
Q Consensus 215 ~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~ 294 (436)
.+.++++.+.+.||+.+|+++|++...+.+. +.|+.. ....+||++.+.||.... . ...
T Consensus 228 ~~~~~~~~~~d~iR~~~P~~pvt~N~~~~~~---------------~~D~~~--~a~~~Dvvs~D~Yp~~~~---~-~~~ 286 (675)
T 3tty_A 228 SLLECFKMERDELKRWTPDIPVTTNLMGFYP---------------ELDYFK--WAKEMDVVSWDNYPSMDT---P-FSF 286 (675)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCEECEECTTCT---------------TSCHHH--HHTTCSSCEEECCCCTTS---C-HHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEccccccC---------------CcCHHH--HhhcCCEEEECCCCCcCC---C-HHH
Confidence 2444556778889999999999976544321 123222 135689999999996421 1 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC--CCC
Q 013811 295 LSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE--GMD 371 (436)
Q Consensus 295 ~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~--g~~ 371 (436)
..+..+.++ +.+ .+||.++.|....... .......+...++... ++++.. +..+.+||+|... +.+
T Consensus 287 ~a~~~dl~R-----~~~-~g~p~~~mE~~~~~~~w~~~~~~~~pg~~r~~~---~~~~A~--Ga~~v~~f~wr~~~~g~E 355 (675)
T 3tty_A 287 TAMAHNLMR-----GLK-SGQPFMLMEQTPGVQNWQPYNSAKRPGVMRLWS---YQAVAH--GADTVMFFQLRRSVGACE 355 (675)
T ss_dssp HHHHHHHHH-----HTT-TTCCEEEEECCSSCCTTSSBCCCCCTTHHHHHH---HHHHHT--TEEEEEESCSBCCCSGGG
T ss_pred HHHHHHHHH-----hhc-CCCCeEEecCCCCCCCCcCCCCCCCccHHHHHH---HHHHhc--ccCeEeeeeccCCCCchh
Confidence 122211111 111 3699999999553211 0000001111222111 122222 5678899999763 222
Q ss_pred CCCCCceEEeCC---CcCHHHHHHHHHHHHHhh
Q 013811 372 AFRDGYEIVLSQ---SPSTANVITQQAHKLYQI 401 (436)
Q Consensus 372 ~~~dg~~i~~~~---d~~~~~li~~~~~~~~~~ 401 (436)
.+. .+++..+ |..+..-+.+-.+.++++
T Consensus 356 ~~h--~g~~~~~g~~~~r~~~ev~~~~~~l~~l 386 (675)
T 3tty_A 356 KYH--GAVIEHVGHEHTRVFRECAELGKELQQL 386 (675)
T ss_dssp TTS--CCSBCTTCSSCSHHHHHHHHHHHHHHHH
T ss_pred hhh--ccccCCCCCCCchHHHHHHHHHHHHHHh
Confidence 221 2233322 233456667777777777
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-19 Score=181.11 Aligned_cols=276 Identities=15% Similarity=0.188 Sum_probs=183.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 77 Y~~~~eDi~lm~~~G~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 144 (512)
T 1v08_A 77 YHMYKTDVRLLKEMGMDAYRFSI----SWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFH-WD------- 144 (512)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC----CHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEeccc----CHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------
Confidence 46899999999999999999833 488899988 9999999999999999999999999999975 33
Q ss_pred hhhHHhhc-CCCCCCCCCCCCCh---HHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------C
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNP---VVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------D 210 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~---~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~ 210 (436)
.|.|.... |. |.++ ...+.|.+|++.+++| |+++ |..|.+.|||.+.. .
T Consensus 145 ~P~~L~~~ygg--------w~~r~~c~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~ 206 (512)
T 1v08_A 145 VPQALEEKYGG--------FLDKSHKSIVEDYTYFAKVCFDN--------FGDK--VKNWLTFNDPQTFTSFSYGTGVFA 206 (512)
T ss_dssp CBHHHHHHHCG--------GGCTTSSHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCST
T ss_pred CCHHHHhhCCC--------CCCccccchHHHHHHHHHHHHHH--------hCCc--ceEEEEcccchhhhhccccccccC
Confidence 25565543 32 5677 8999999999999999 9997 88999999997531 0
Q ss_pred C---C-------------hHHHHHHH------HHHHHHhhcc--CCCCEEEeCCC--cccCCCC-Ccc------------
Q 013811 211 P---S-------------GRTIQAWI------TEMASYVKSI--DRNHLLEAGLE--GFYGQST-PQR------------ 251 (436)
Q Consensus 211 ~---~-------------~~~~~~w~------~~~~~~Ir~~--Dp~~lV~vG~~--g~~~~~~-~~~------------ 251 (436)
+ + .+.++.-. ..+.+.+|+. +|+-.|.+-.. .++..+. ++.
T Consensus 207 Pg~~~~~~~~~c~~g~~~~~~~~a~H~~llAHa~Av~~~r~~~~~~~g~IGi~l~~~~~~P~~~~~~D~~Aa~~~~~~~~ 286 (512)
T 1v08_A 207 PGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINL 286 (512)
T ss_dssp TCBCCTTSSSSBTTSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHT
T ss_pred CccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCeeecCCCCHHHHHHHHHHHHHHh
Confidence 0 0 12222222 3345666775 67655543221 1222211 100
Q ss_pred --------ccCCCC------------CcccchhhhhcCCCCcceEEeecCCCCCCC---------CCCh-----------
Q 013811 252 --------KRVNPN------------LDIGTDFVANNLIPGIDFATVHSYPDQWLS---------SSND----------- 291 (436)
Q Consensus 252 --------~~~np~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~---------~~~~----------- 291 (436)
....|. +..+ |. ......+||+++++|...... ....
T Consensus 287 ~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~-d~--~~i~g~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (512)
T 1v08_A 287 GWFLEPVVRGDYPFSMRSLARERLPFFKDE-QK--EKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVN 363 (512)
T ss_dssp HHHHHHHHHSSCCHHHHHHHGGGSCCCCHH-HH--HHHTTCCSCEEEECCCEEEEEECCCCTTCCCSSGGGGGCEEEESB
T ss_pred HhhhhHhhCCcCCHHHHHhhHhcCCCCCHH-HH--HHhCCCCCEEEEecccCcEeecCCccccCCCcccccccccccccc
Confidence 011111 0000 00 011246899999999632100 0000
Q ss_pred --------h-HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC---------CChHHHHHHHHHHHHHHHH
Q 013811 292 --------R-DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG---------YSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 292 --------~-~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g---------~~~~~r~~~~~~~~~~i~~ 349 (436)
+ ... .....-|+..+....+.+++| |+|+|.|+...+.. ..+..|.+|++..+..+.+
T Consensus 364 ~~~~~p~~~~t~~gW~~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~~~g~v~D~~Ri~Yl~~hl~~~~~ 443 (512)
T 1v08_A 364 GPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKE 443 (512)
T ss_dssp CTTSCBSSCBCSSSSCBCCTHHHHHHHHHHHHTSCCCCEEEEECCCCEECCSSSCCCHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcCCCCCcccCcHHHHHHHHHHHHHcCCCcEEEEecCCCcccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 0 000 112233555555555558886 99999999753211 1357899999999999999
Q ss_pred HhhcCCCccceeecccccCCCCCCCCCc
Q 013811 350 SAKRGGAAAGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g~~~~~dg~ 377 (436)
++++|..+.|++.|++.|+. +|..||
T Consensus 444 Ai~dGv~V~GY~~WSliDnf--eW~~Gy 469 (512)
T 1v08_A 444 SIDLGSNVQGYFAWSLLDNF--EWFAGF 469 (512)
T ss_dssp HHHTTCCEEEEEEECSBCCC--CGGGTT
T ss_pred HHHCCCCEEEEEECcCcccc--chhccc
Confidence 99999999999999999984 476654
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=177.96 Aligned_cols=278 Identities=17% Similarity=0.189 Sum_probs=182.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC--CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP--GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p--g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++|++.||++|+|+.|+-+ .|++++|.. |.+|++.++.+|++|+++.++||.++++|++ |+ .
T Consensus 73 Yhry~eDi~Lm~elG~~~yRfSI----sWsRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~D-------l 140 (481)
T 3qom_A 73 YHRYPEDIELFAEMGFKCFRTSI----AWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAH-FE-------M 140 (481)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHHHHHHHHHHHHcCCCEEEecC----cHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEcc-CC-------C
Confidence 47899999999999999999832 488888875 6899999999999999999999999999976 43 2
Q ss_pred hhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC-------------
Q 013811 145 VNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD------------- 210 (436)
Q Consensus 145 ~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~------------- 210 (436)
|.|.... |+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++...
T Consensus 141 P~~L~~~yGG--------W~nr~~v~~F~~YA~~~f~~--------fgdr--Vk~W~T~NEp~~~~~~g~~~~~y~~~G~ 202 (481)
T 3qom_A 141 PYHLVKQYGG--------WRNRKLIQFYLNFAKVCFER--------YRDK--VTYWMTFNEINNQTNFESDGAMLTDSGI 202 (481)
T ss_dssp BHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------TTTT--CCEEEEETTGGGGGSTTCHHHHHHHHCC
T ss_pred CHHHHhhcCC--------CCCHHHHHHHHHHHHHHHHH--------hCCc--CCEEEEccCccHHhhcCccccccccccc
Confidence 4555432 43 78899999999999999999 9984 678999999986310
Q ss_pred --CCh-----HHHHHH------HHHHHHHhhccCCCCEEEeCC--CcccCCCC-Ccc-------------------ccCC
Q 013811 211 --PSG-----RTIQAW------ITEMASYVKSIDRNHLLEAGL--EGFYGQST-PQR-------------------KRVN 255 (436)
Q Consensus 211 --~~~-----~~~~~w------~~~~~~~Ir~~Dp~~lV~vG~--~g~~~~~~-~~~-------------------~~~n 255 (436)
+.+ +.++.- ...+.+.+|+..|+..|.+-. ...+..+. ++. ....
T Consensus 203 ~~p~~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~f~d~~~~G~Y 282 (481)
T 3qom_A 203 IHQPGENRERWMYQAAHYELVASAAAVQLGHQINPDFQIGCMIAMCPIYPLTAAPADVLFAQRAMQTRFYFADVHCNGTY 282 (481)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECCCEEESSSCHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHhCcccceeEEeecceeecCCCCHHHHHHHHHHHHHhhHHHHHHhCCCC
Confidence 110 111111 134456778888877664322 12222111 110 0111
Q ss_pred CCC-----c-cc--chhh----hhcCCCCcceEEeecCCCCCCCC---------------CChh-Hh--HHHHHHHHHHH
Q 013811 256 PNL-----D-IG--TDFV----ANNLIPGIDFATVHSYPDQWLSS---------------SNDR-DQ--LSFLNNWLDTH 305 (436)
Q Consensus 256 p~~-----~-~g--~df~----~~~~~~~iD~~s~H~Y~~~w~~~---------------~~~~-~~--~~~~~~~i~~~ 305 (436)
|.. . .+ ..|. .......+||+++++|....... ...+ .. .+....-|+..
T Consensus 283 P~~~~~~~~~~~~~p~~~~~d~~~i~~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~p~~~~t~~gw~i~P~Gl~~~ 362 (481)
T 3qom_A 283 PQWLRNRFESEHFNLDITAEDLKILQAGTVDYIGFSYYMSFTVKDTGKLAYNEEHDLVKNPYVKASDWGWQVDPVGLRYA 362 (481)
T ss_dssp CHHHHHHHHHTTCCCCCCHHHHHHHHHCCCSEEEEEESCCEEECCCSSSCCCTTTSEECCTTSCBCTTSCBCCSHHHHHH
T ss_pred CHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEeCCcCeEeecCCCCCCCccccccCCCCCCcCCCcceeccHHHHHH
Confidence 100 0 00 0000 00012568999999996421100 0000 00 00011224444
Q ss_pred HHHHHHhcCCcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccCCCCCCCCC
Q 013811 306 IQDAEHILRKPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 306 ~~~a~~~~~kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
+....+.+++||+|+|.|+...+ ....+..|..|++..+..+.+++ .+|..+.|++.|++.|+. +|..|
T Consensus 363 L~~i~~rY~~Pi~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dnf--eW~~G 437 (481)
T 3qom_A 363 MNWFTDRYHLPLFIVENGLGAIDKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGVDLIGYTPWGCIDLV--AASTG 437 (481)
T ss_dssp HHHHHHHHCCCEEEEEECCCBCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCCEEEECCBTSBCCC--CTTTC
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCcCcCCCcCCHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeeccccc--ccccC
Confidence 44444447899999999997532 12346789999999999999999 888899999999999984 46555
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.7e-19 Score=178.54 Aligned_cols=282 Identities=15% Similarity=0.223 Sum_probs=184.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC--CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP--GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p--g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+ .
T Consensus 58 Y~~~~eDi~lm~~~G~~~~R~si----sWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H-~d-------~ 125 (464)
T 1wcg_A 58 YHKYKEDVAIIKDLNLKFYRFSI----SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH-WD-------L 125 (464)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHhhHHHHHHHHHhCCCeEEecc----cHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------C
Confidence 47799999999999999999833 488899987 9999999999999999999999999999975 43 2
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC--------CC--C--
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS--------DP--S-- 212 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~--------~~--~-- 212 (436)
|.|....|. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+ .
T Consensus 126 P~~L~~~gg--------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~gy~~G~~~Pg~~~~ 187 (464)
T 1wcg_A 126 PQYLQDLGG--------WVNPIMSDYFKEYARVLFTY--------FGDR--VKWWITFNEPIAVCKGYSIKAYAPNLNLK 187 (464)
T ss_dssp BHHHHHTTG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHSSSSTTCCCCH
T ss_pred CcchhhcCC--------CCChhHHHHHHHHHHHHHHH--------hCCc--CcEEEEccccchhhcccccCccCCCcccc
Confidence 556554332 67788999999999999999 9987 78999999998531 01 1
Q ss_pred -hHHHHHH------HHHHHHHhhcc---CCCCEEEeCC--CcccCC-CC-Ccc--------------------ccCCCCC
Q 013811 213 -GRTIQAW------ITEMASYVKSI---DRNHLLEAGL--EGFYGQ-ST-PQR--------------------KRVNPNL 258 (436)
Q Consensus 213 -~~~~~~w------~~~~~~~Ir~~---Dp~~lV~vG~--~g~~~~-~~-~~~--------------------~~~np~~ 258 (436)
...++.- ...+.+.+|+. +|+-.|.+-. ..++.. +. +.. ....|..
T Consensus 188 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~ 267 (464)
T 1wcg_A 188 TTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPI 267 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEECCCEEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHTSSSCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEeeCCeeeeCCCCCHHHHHHHHHHHHHHhHHhhhhhhCCCCCHH
Confidence 1112221 13345666765 5655554322 122222 11 110 0111110
Q ss_pred -----c-----c----cc--hhh---hhcCCCCcceEEeecCCCCCCC-------C----------CCh--h-H-hH---
Q 013811 259 -----D-----I----GT--DFV---ANNLIPGIDFATVHSYPDQWLS-------S----------SND--R-D-QL--- 295 (436)
Q Consensus 259 -----~-----~----g~--df~---~~~~~~~iD~~s~H~Y~~~w~~-------~----------~~~--~-~-~~--- 295 (436)
. . .. .|. .......+||+++++|...... . ... + . ..
T Consensus 268 ~~~~~~~~s~~~G~~~~~~p~~~~~d~~~i~~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~gW~ 347 (464)
T 1wcg_A 268 MKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLKPNETPYI 347 (464)
T ss_dssp HHHHHHHHHHHTTCSSCSSCCCCHHHHHHHTTCCSSEEEECCCEEEEEESCCSSTTSCGGGCEEEECCGGGCCSSCCCSS
T ss_pred HHHHHHhhhhhcccccccCCCCCHHHHHHhcCCCCEEEEcCccCeEeecCCCCcccccCCcCccccCCCCCCcccCCCCc
Confidence 0 0 00 000 0001246899999999642110 0 000 0 0 01
Q ss_pred HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCccceeecccccCCCCCC
Q 013811 296 SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAK-RGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 296 ~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~-~~~~~~G~~~W~~~~~g~~~~ 373 (436)
.....-|+..+....+.+++| |+|+|.|+..+ ....+..|..|++..+..+.+++. +|..+.|++.|++.|+. +|
T Consensus 348 ~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~-g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~--eW 424 (464)
T 1wcg_A 348 IPVPEGLRKLLIWLKNEYGNPQLLITENGYGDD-GQLDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNF--EW 424 (464)
T ss_dssp CCCHHHHHHHHHHHHHHHTSCCEEEEEECCCBS-CCSSCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECSBCCC--CG
T ss_pred ccCcHHHHHHHHHHHHHhCCCCEEEecCCCCCC-CCcCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccccc--cc
Confidence 112333555555554457776 99999999742 224568999999999999999999 89999999999999984 36
Q ss_pred CCC----ceEEe
Q 013811 374 RDG----YEIVL 381 (436)
Q Consensus 374 ~dg----~~i~~ 381 (436)
..| |++++
T Consensus 425 ~~gy~~RfGliy 436 (464)
T 1wcg_A 425 FYGYSIHFGLVK 436 (464)
T ss_dssp GGGGGSBCCSEE
T ss_pred ccccCCCCceEE
Confidence 554 45555
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-18 Score=169.42 Aligned_cols=243 Identities=17% Similarity=0.161 Sum_probs=158.8
Q ss_pred HHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC--CCCCCChhhhhhH
Q 013811 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN--YDSFGGKKQYVNW 147 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~--w~~~gg~~~y~~W 147 (436)
.+++++.||++|+|+||+-++ .+|.+|.++ ++.++.++..|+++||+|+|+||.. |.+ |.|
T Consensus 29 ~~~~~~ilk~~G~n~vRlri~-------v~P~~g~~d---~~~~~~~~~~ak~~Gl~v~ld~hysd~wad-------P~~ 91 (334)
T 1fob_A 29 TQALETILADAGINSIRQRVW-------VNPSDGSYD---LDYNLELAKRVKAAGMSLYLDLHLSDTWAD-------PSD 91 (334)
T ss_dssp BCCHHHHHHHHTCCEEEEEEC-------SCCTTCTTC---HHHHHHHHHHHHHTTCEEEEEECCSSSCCB-------TTB
T ss_pred CchHHHHHHHcCCCEEEEEEE-------ECCCCCccC---HHHHHHHHHHHHHCCCEEEEEeccCCCCCC-------ccc
Confidence 346799999999999999332 234567666 7788899999999999999999753 322 111
Q ss_pred HhhcCCCCCCCCCCCC--ChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEEEeecCCCCCCC------CChHHHHH
Q 013811 148 ARSQGQFLTSDDDFFR--NPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAWELMNEPRCTSD------PSGRTIQA 218 (436)
Q Consensus 148 ~~~~G~~~~~~~~f~~--~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~weL~NEp~~~~~------~~~~~~~~ 218 (436)
. ..+..|-. -++..+.+.+|.+.++++ +++.. .+-+|+++||++.... ...+.+.+
T Consensus 92 q-------~~p~~W~~~~~~~~~~~~~~yt~~v~~~--------l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~ 156 (334)
T 1fob_A 92 Q-------TTPSGWSTTDLGTLKWQLYNYTLEVCNT--------FAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGA 156 (334)
T ss_dssp C-------BCCTTSCSSCHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHH
T ss_pred c-------cCccccccCChHHHHHHHHHHHHHHHHH--------HHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHH
Confidence 0 01112222 245788899999999988 77743 3557999999986432 12467888
Q ss_pred HHHHHHHHhhccC--CCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC---CCCcceEEeecCCCCCCCCCChhH
Q 013811 219 WITEMASYVKSID--RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL---IPGIDFATVHSYPDQWLSSSNDRD 293 (436)
Q Consensus 219 w~~~~~~~Ir~~D--p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~---~~~iD~~s~H~Y~~~w~~~~~~~~ 293 (436)
++++.+++||+.+ |+..|++....-.. . ..+..-.|-..... ...+||+++|+||. |......+
T Consensus 157 ~~~~a~~avr~~~~~p~~~v~~h~~~~~~--~-------~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~-w~~~~~~~- 225 (334)
T 1fob_A 157 LLHSGAWGVKDSNLATTPKIMIHLDDGWS--W-------DQQNYFYETVLATGELLSTDFDYFGVSYYPF-YSASATLA- 225 (334)
T ss_dssp HHHHHHHHHHTSCCSSCCEEEEEESCTTC--H-------HHHHHHHHHHHHTSSSCGGGCCEEEEECCSS-SCTTCCHH-
T ss_pred HHHHHHHHHHHhccCCCCeEEEEcCCcCc--h-------HHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC-cCCCCCHH-
Confidence 9999999999999 98888765431000 0 00000000000111 12689999999997 54322211
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC-------------CChHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 294 QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG-------------YSTYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 294 ~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g-------------~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
. +...++...+.++|||+|+|+|.+....+ .+++.|..|++.+++.+.+ ...+.|.
T Consensus 226 ---~----l~~~l~~~~~rygKpv~itEtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~----~~~~~G~ 294 (334)
T 1fob_A 226 ---S----LKTSLANLQSTYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEA----TTDGLGV 294 (334)
T ss_dssp ---H----HHHHHHHHHHHHCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STTEEEE
T ss_pred ---H----HHHHHHHHHHHHCCCEEEEEcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHh----cCCceEE
Confidence 1 22333333234899999999999864321 3577889999988877653 2357899
Q ss_pred eecccc
Q 013811 361 LFWQLL 366 (436)
Q Consensus 361 ~~W~~~ 366 (436)
++|++.
T Consensus 295 f~We~~ 300 (334)
T 1fob_A 295 YYWEPA 300 (334)
T ss_dssp EEECTT
T ss_pred EEECcc
Confidence 999974
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-18 Score=169.77 Aligned_cols=274 Identities=15% Similarity=0.152 Sum_probs=168.3
Q ss_pred EEEeecccccccc---cCCcch-hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHH
Q 013811 48 FANGFNAYWLMYV---ASDPSQ-RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARK 122 (436)
Q Consensus 48 ~~~G~N~~~~~~~---~~~~~~-~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~ 122 (436)
+++|++..|+... +..-.+ ....+..|+.||++|+|+||+-++.+..+..-++ .+|.+| ++.+..+++.|++
T Consensus 24 f~~G~Dis~~~~~e~~G~~y~~~~G~~~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d---~~~~~~~a~~Ak~ 100 (399)
T 1ur4_A 24 FIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNND---LEKAIQIGKRATA 100 (399)
T ss_dssp CEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCC---HHHHHHHHHHHHH
T ss_pred eEEEEehhhhHHHHHcCCeeeCCCCccchHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCC---HHHHHHHHHHHHH
Confidence 6789987666331 100000 1223467999999999999984332211111011 124344 7788889999999
Q ss_pred cCCEEEEecccC--CCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEE
Q 013811 123 YGIKLILSLANN--YDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAW 199 (436)
Q Consensus 123 ~Gi~vil~l~~~--w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~w 199 (436)
+||+|+|+||-. |.+.|....-..|.. .+.++..+.+.+|.+.++++ ++++. .+-+|
T Consensus 101 ~GLkVlldfHysD~WadPg~Q~~P~aW~~------------~~~~~l~~~~~~yt~~~l~~--------l~~~g~~~~~v 160 (399)
T 1ur4_A 101 NGMKLLADFHYSDFWADPAKQKAPKAWAN------------LNFEDKKTALYQYTKQSLKA--------MKAAGIDIGMV 160 (399)
T ss_dssp TTCEEEEEECSSSSCCSSSCCCCCGGGTT------------CCHHHHHHHHHHHHHHHHHH--------HHHTTCCEEEE
T ss_pred CCCEEEEEeccCCccCCcccccCcccccc------------CCHHHHHHHHHHHHHHHHHH--------HHhcCCCCcEE
Confidence 999999999843 332211000001210 12356677888888888888 76664 35689
Q ss_pred EeecCCCCCCC--CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEE
Q 013811 200 ELMNEPRCTSD--PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFAT 277 (436)
Q Consensus 200 eL~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s 277 (436)
+++||+..... ...+.+.+++++.+++||+.+|+++|++....-.. +..+.+-.|.... ....+|+++
T Consensus 161 qvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~---------~~~~~~~~d~l~~-~g~d~DvIG 230 (399)
T 1ur4_A 161 QVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET---------SGRYAWIAETLHR-HHVDYDVFA 230 (399)
T ss_dssp EESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS---------TTHHHHHHHHHHH-TTCCCSEEE
T ss_pred EEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc---------hHHHHHHHHHHHH-cCCCcCeEe
Confidence 99999987442 13467888899999999999999998775432111 0001000111111 235799999
Q ss_pred eecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC------------------CCChHHHHHH
Q 013811 278 VHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP------------------GYSTYQRDVM 339 (436)
Q Consensus 278 ~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~------------------g~~~~~r~~~ 339 (436)
+|+||. |... +.. +.+.++...+.++|||+|+|+|.+.... ..+++.|.+|
T Consensus 231 ~syYp~-W~~~------l~~----l~~~l~~l~~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~ 299 (399)
T 1ur4_A 231 SSYYPF-WHGT------LKN----LTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANA 299 (399)
T ss_dssp EEECTT-TSCC------HHH----HHHHHHHHHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHH
T ss_pred EecCcc-chhh------HHH----HHHHHHHHHHHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCCHHHHHHH
Confidence 999997 5421 122 2333333332389999999999986321 0256789999
Q ss_pred HHHHHHHHHHHhhcCCCccceeecc--cccC
Q 013811 340 FNTVYYKIYSSAKRGGAAAGGLFWQ--LLTE 368 (436)
Q Consensus 340 ~~~~~~~i~~~~~~~~~~~G~~~W~--~~~~ 368 (436)
++.+++.+.+. ++.+.|.++|. |.+.
T Consensus 300 l~~l~~~v~~~---~~~g~GvfyWep~w~~~ 327 (399)
T 1ur4_A 300 VRDVIQAVSDV---GEAGIGVFYWEPAWIPV 327 (399)
T ss_dssp HHHHHHHHHTT---CTTEEEEEEECTTCCCS
T ss_pred HHHHHHHHHhc---cCceEEEEEEccceecc
Confidence 99988866432 23578999998 5553
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=177.92 Aligned_cols=280 Identities=14% Similarity=0.184 Sum_probs=186.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 61 Y~~y~eDi~lm~~~G~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 128 (465)
T 2e3z_A 61 YNRWREDVQLLKSYGVKAYRFSL----SWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYH-WD------- 128 (465)
T ss_dssp TTTHHHHHHHHHHTTCSEEEEEC----CHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------
T ss_pred HHHhHHHHHHHHHhCCCceeccc----chHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------
Confidence 46799999999999999999833 488899987 8999999999999999999999999999975 32
Q ss_pred hhhHHhhc-CCCCCCCCCCCCC-hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC-
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRN-PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~- 211 (436)
.|.|.... |. |.+ ++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 129 ~P~~L~~~ygg--------w~~~~~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg 190 (465)
T 2e3z_A 129 LPQALDDRYGG--------WLNKEEAIQDFTNYAKLCFES--------FGDL--VQNWITFNEPWVISVMGYGNGIFAPG 190 (465)
T ss_dssp CBHHHHHHHCG--------GGSHHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTBCSSTTC
T ss_pred CCHHHHhhcCC--------CCCCcchHHHHHHHHHHHHHH--------hCCC--ceEEEEccCchHhhhhhhhcCccCcc
Confidence 35666543 42 678 99999999999999999 9997 78999999998531 01
Q ss_pred ---ChHHHHHHH------HHHHHHhhcc---CCCCEEEe--CCCcccCCCC-Ccc--------------------ccCCC
Q 013811 212 ---SGRTIQAWI------TEMASYVKSI---DRNHLLEA--GLEGFYGQST-PQR--------------------KRVNP 256 (436)
Q Consensus 212 ---~~~~~~~w~------~~~~~~Ir~~---Dp~~lV~v--G~~g~~~~~~-~~~--------------------~~~np 256 (436)
....++.-. ..+.+.+|+. +|+-.|.+ ....++..+. ++. ....|
T Consensus 191 ~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP 270 (465)
T 2e3z_A 191 HVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYP 270 (465)
T ss_dssp CBCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHHHHHHHSSCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEecCCeeecCCCCHHHHHHHHHHHHHHHHhhhhheecccCC
Confidence 112222222 3345666775 56555543 2212222211 110 01112
Q ss_pred C------------CcccchhhhhcCCCCcceEEeecCCCCCCC-----------------C-CC---hhHhH---HHHHH
Q 013811 257 N------------LDIGTDFVANNLIPGIDFATVHSYPDQWLS-----------------S-SN---DRDQL---SFLNN 300 (436)
Q Consensus 257 ~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~-----------------~-~~---~~~~~---~~~~~ 300 (436)
. +.. .|. ... ...+||+++++|...... . .. ..... +....
T Consensus 271 ~~~~~~~~~~~p~~~~-~d~-~~i-~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~~t~~gW~~i~P~ 347 (465)
T 2e3z_A 271 PRIKKILGDRLPEFTP-EEI-ELV-KGSSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGP 347 (465)
T ss_dssp HHHHHHHGGGSCCCCH-HHH-HHH-TTCCSSEEEECCCEEEEEECCCCGGGTSEEEESBCTTSCBSSCBBSSTTCBCCHH
T ss_pred HHHHHHHHhhCCCCCH-HHH-HHh-CCCCCEEEEeeccceEEecCCCCCCCcccccccccccCCCCCCCCCCCCCccccH
Confidence 1 000 000 011 245899999999642110 0 00 00001 11233
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccCCCCC
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTEGMDA 372 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~g~~~ 372 (436)
-|+..+....+.+++||+|+|.|+...+. ...+..|.+|++..+..+.+++ ++|..+.|++.|++.|+. +
T Consensus 348 Gl~~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~--e 425 (465)
T 2e3z_A 348 GFRWLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRGYFGWSLLDNF--E 425 (465)
T ss_dssp HHHHHHHHHHHHHCSCEEEEEECCCBTTGGGSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSSCCC--C
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCccCccccccccCcCCHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeccccccc--c
Confidence 35555555555589999999999975431 1345789999999999999999 889999999999999984 3
Q ss_pred CCCC----ceEEe
Q 013811 373 FRDG----YEIVL 381 (436)
Q Consensus 373 ~~dg----~~i~~ 381 (436)
|..| |++++
T Consensus 426 W~~gy~~RfGli~ 438 (465)
T 2e3z_A 426 WAEGYKVRFGVTH 438 (465)
T ss_dssp GGGTTSSCCCSEE
T ss_pred hhcCcCCCCCeEE
Confidence 6444 45554
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=177.44 Aligned_cols=280 Identities=13% Similarity=0.199 Sum_probs=182.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 72 YhrykeDi~lm~elG~~~yRfsI----sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~d-------lP 139 (481)
T 3f5l_A 72 YHRYKEDVNLMKSLNFDAYRFSI----SWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH-YD-------LP 139 (481)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCS-SC-------CB
T ss_pred hhhHHHHHHHHHHcCCCEEEecC----cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------CC
Confidence 47899999999999999999833 488899887 8899999999999999999999999999986 43 25
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC----
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---- 211 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---- 211 (436)
.|.... |+ |.+++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+
T Consensus 140 ~~L~~~yGG--------W~nr~~v~~F~~Ya~~~~~~--------fgd~--Vk~W~T~NEp~~~~~~gy~~G~~aPg~~~ 201 (481)
T 3f5l_A 140 LALEKKYGG--------WLNAKMADLFTEYADFCFKT--------FGNR--VKHWFTFNQPRIVALLGYDQGTNPPKRCT 201 (481)
T ss_dssp HHHHHHHCG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCCT
T ss_pred HHHHHHhCC--------CCCHHHHHHHHHHHHHHHHH--------hCCC--CCeEEEccCchHHHHhcccccccCCcccc
Confidence 565533 43 77899999999999999999 9985 67899999997531 00
Q ss_pred --------ChHHHHHHH------HHHHHHhhccC---CCCEEEeCC--CcccCCCC-Ccc--------------------
Q 013811 212 --------SGRTIQAWI------TEMASYVKSID---RNHLLEAGL--EGFYGQST-PQR-------------------- 251 (436)
Q Consensus 212 --------~~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~--~g~~~~~~-~~~-------------------- 251 (436)
..+.++.-. ..+.+.+|+.. |+-.|.+-. ..++..+. ++.
T Consensus 202 ~~~~g~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~~~~~~~~P~~~~p~D~~Aa~~~~~~~~~~f~dp~~ 281 (481)
T 3f5l_A 202 KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLI 281 (481)
T ss_dssp TCTTCCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCCceecCCCCHHHHHHHHHHHHHhhhhhhhhhc
Confidence 012222222 23355677765 354444321 11222111 100
Q ss_pred ccCCCCC-----c-ccchhh---hhcCCCCcceEEeecCCCCCC---CC---C--Ch-------------------hHhH
Q 013811 252 KRVNPNL-----D-IGTDFV---ANNLIPGIDFATVHSYPDQWL---SS---S--ND-------------------RDQL 295 (436)
Q Consensus 252 ~~~np~~-----~-~g~df~---~~~~~~~iD~~s~H~Y~~~w~---~~---~--~~-------------------~~~~ 295 (436)
....|.. . ....|. .......+||+++++|..... .. . .. ....
T Consensus 282 ~G~YP~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 361 (481)
T 3f5l_A 282 NGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANS 361 (481)
T ss_dssp HSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSSEEEECCCEEEEECCCCCCCCCCCHHHHTCCEEESEETTEESSCBCSS
T ss_pred CCCCCHHHHHHHhhcCCCCCHHHHHHhcCCCcEEEEecccceEeccCCCCCcCCCCccccCcceeecccCCCCCCCcCCC
Confidence 0111100 0 000000 001124689999999963210 00 0 00 0000
Q ss_pred HH---HHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-----CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccc
Q 013811 296 SF---LNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-----YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLL 366 (436)
Q Consensus 296 ~~---~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-----~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~ 366 (436)
.| ..+-|+..+....+.+++| |+|+|.|+...+.- ..+..|.+|++..+..+.+++.+|..+.|++.|++.
T Consensus 362 gW~~i~P~GL~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~g~v~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~ 441 (481)
T 3f5l_A 362 NWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAGYFAWSLL 441 (481)
T ss_dssp TTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEESSCCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSB
T ss_pred CCceecHHHHHHHHHHHHHHcCCCcEEEecCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccc
Confidence 11 2233555555554447776 99999999754310 125789999999999999999999999999999999
Q ss_pred cCCCCCCCCCce
Q 013811 367 TEGMDAFRDGYE 378 (436)
Q Consensus 367 ~~g~~~~~dg~~ 378 (436)
|+. +|..||.
T Consensus 442 Dnf--eW~~Gy~ 451 (481)
T 3f5l_A 442 DNF--EWLSGYT 451 (481)
T ss_dssp CCC--CGGGGGG
T ss_pred chh--hhhcccc
Confidence 984 5766643
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=184.38 Aligned_cols=276 Identities=14% Similarity=0.199 Sum_probs=184.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|.+ |+ .|
T Consensus 127 Y~~y~eDi~lm~~lG~~~~RfsI----sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------~P 194 (565)
T 2dga_A 127 YHLYEEDVKALKDMGMKVYRFSI----SWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWH-WD-------TP 194 (565)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred HHHHHHHHHHHHHhCCCeEEecc----cHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------Cc
Confidence 46899999999999999999833 488899988 9999999999999999999999999999975 43 25
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---C
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---S 212 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~ 212 (436)
.|.... |. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+ +
T Consensus 195 ~~L~~~ygg--------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~aPg~~~ 256 (565)
T 2dga_A 195 QALEDKYGG--------FLNRQIVDDYKQFAEVCFKN--------FGDR--VKNWFTFNEPHTYCCFSYGEGIHAPGRCS 256 (565)
T ss_dssp HHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCBCC
T ss_pred HHHHHhcCC--------CCCchHHHHHHHHHHHHHHH--------hCCC--CceEEEeccchhhhhcccccCccCccccc
Confidence 565543 32 67889999999999999999 9987 88999999997531 00 0
Q ss_pred -------------hHHHHHHH------HHHHHHhhccC---CCCEEEeCCC--cccCCCC-Ccc----------------
Q 013811 213 -------------GRTIQAWI------TEMASYVKSID---RNHLLEAGLE--GFYGQST-PQR---------------- 251 (436)
Q Consensus 213 -------------~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~~--g~~~~~~-~~~---------------- 251 (436)
.+.++.-. ..+.+.+|+.. |+-.|.+-.. .++..+. ++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~a~HhlllAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~s~~p~D~~AA~r~~~~~~~~fl 336 (565)
T 2dga_A 257 PGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFL 336 (565)
T ss_dssp TTSSSSBCCSCTTTHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCEEEEEEEEEEEEESSSSHHHHHHHHHHHHHHTHHHH
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCceecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12222222 33456667753 5555543221 1222111 100
Q ss_pred ----ccCCCC------------CcccchhhhhcCCCCcceEEeecCCCCCC---C------CCCh---------------
Q 013811 252 ----KRVNPN------------LDIGTDFVANNLIPGIDFATVHSYPDQWL---S------SSND--------------- 291 (436)
Q Consensus 252 ----~~~np~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~---~------~~~~--------------- 291 (436)
....|. +..+ |. ... ...+||+++++|..... . ....
T Consensus 337 Dp~~~G~YP~~~~~~l~~~lp~~t~~-d~-~~i-kg~~DFiGiNYY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (565)
T 2dga_A 337 EPVVRGDYPFSMRSLIGDRLPMFTKE-EQ-EKL-ASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDG 413 (565)
T ss_dssp HHHHHSSCCHHHHHHHGGGSCCCCHH-HH-HHH-TTCCSEEEEEEEEEEEEEECCCSTTCCCCSGGGGGCEEEESBCTTS
T ss_pred HHHhCCCCCHHHHHHHHhhCCCCCHH-HH-HHh-CCCCCEEEEccCcCceeecCCcccccCCccccccccccccccccCC
Confidence 011111 0000 00 011 24689999999953210 0 0000
Q ss_pred ----h-HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCC------CCCChHHHHHHHHHHHHHHHHHhhcCCC
Q 013811 292 ----R-DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKD------PGYSTYQRDVMFNTVYYKIYSSAKRGGA 356 (436)
Q Consensus 292 ----~-~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~------~g~~~~~r~~~~~~~~~~i~~~~~~~~~ 356 (436)
+ ... .....-|+..+....+.+++| |+|+|.|+...+ ....+..|..|++..+..+.+++++|..
T Consensus 414 ~p~~~~t~~gWl~I~P~GLr~~L~~i~~rY~~PpI~ITENG~~~~d~~~~~~g~i~D~~RI~Yl~~hL~~v~~AI~dGVd 493 (565)
T 2dga_A 414 NDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGAD 493 (565)
T ss_dssp CBSSCBCSSTTCBCCHHHHHHHHHHHHHTSCCCCEEEEECCCCEETTCTTCCSTTCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCcCCCCCcccChHHHHHHHHHHHHHcCCCCEEEecCCCCCCCcccCcCCccCCHHHHHHHHHHHHHHHHHHHCCCC
Confidence 0 001 112334566665555568887 999999987522 1245689999999999999999999999
Q ss_pred ccceeecccccCCCCCCCCCc
Q 013811 357 AAGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 357 ~~G~~~W~~~~~g~~~~~dg~ 377 (436)
+.|++.|++.|+. +|..||
T Consensus 494 V~GY~~WSliDnf--EW~~Gy 512 (565)
T 2dga_A 494 VRGHFTWGLIDNF--EWSLGY 512 (565)
T ss_dssp EEEEEEECSBCCC--CGGGGG
T ss_pred EEEEEECcccccc--chhcCc
Confidence 9999999999984 476653
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=179.16 Aligned_cols=279 Identities=15% Similarity=0.196 Sum_probs=183.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 129 Yh~y~eDi~lm~~lG~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H-~d------- 196 (565)
T 1v02_A 129 YHMYAEDVRLLKEMGMDAYRFSI----SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFH-WD------- 196 (565)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC----CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEEccc----CHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------
Confidence 46799999999999999999833 488899987 9999999999999999999999999999975 43
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 197 ~P~~L~~~ygg--------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~ 258 (565)
T 1v02_A 197 TPQALVDAYGG--------FLDERIIKDYTDFAKVCFEK--------FGKT--VKNWLTFNEPETFCSVSYGTGVLAPGR 258 (565)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCB
T ss_pred CCHHHHhhcCC--------CCCchHHHHHHHHHHHHHHH--------hCCc--ceEEEEccCchhhhhhhhccCcCCCcc
Confidence 25565543 32 67889999999999999999 9987 88999999997521 00
Q ss_pred -C-------------hHHHHHHH------HHHHHHhhcc--CCCCEEEeCCC--cccCCCC-Ccc---------------
Q 013811 212 -S-------------GRTIQAWI------TEMASYVKSI--DRNHLLEAGLE--GFYGQST-PQR--------------- 251 (436)
Q Consensus 212 -~-------------~~~~~~w~------~~~~~~Ir~~--Dp~~lV~vG~~--g~~~~~~-~~~--------------- 251 (436)
+ .+.++.-. ..+++.+|+. +|+-.|.+-.. .++..+. ++.
T Consensus 259 ~~~~~~~~c~~g~~~~~~~~a~HhlllAHa~Av~~~r~~~~~~~g~IGi~l~~~~~~P~s~~p~D~~AA~r~~~~~~~~f 338 (565)
T 1v02_A 259 CSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWF 338 (565)
T ss_dssp CCTTSCSSBCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCTTTCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCCeeecCCCCHHHHHHHHHHHHHHhhhh
Confidence 0 12222222 3345567775 66655543221 1222211 100
Q ss_pred -----ccCCCCC-----cc-cchhh---hhcCCCCcceEEeecCCCCCCC---------CCCh-----------------
Q 013811 252 -----KRVNPNL-----DI-GTDFV---ANNLIPGIDFATVHSYPDQWLS---------SSND----------------- 291 (436)
Q Consensus 252 -----~~~np~~-----~~-g~df~---~~~~~~~iD~~s~H~Y~~~w~~---------~~~~----------------- 291 (436)
....|.. .. ...|. .......+||+++++|...... ....
T Consensus 339 lDp~~~G~YP~~~~~~~~~~lp~~t~~d~~~ikg~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 418 (565)
T 1v02_A 339 LEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNA 418 (565)
T ss_dssp HHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCSTTCCCCSGGGGGCEEEESBCTTSCB
T ss_pred hhhhcCCCCCHHHHHHHHhhCCCCCHHHHHHhCCCCCEEEEecccCcEEecCCCcccCCCccccccccccccccccCCCC
Confidence 0111110 00 00000 0011246899999999632110 0000
Q ss_pred --h-HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-------CChHHHHHHHHHHHHHHHHHhhcCCCc
Q 013811 292 --R-DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-------YSTYQRDVMFNTVYYKIYSSAKRGGAA 357 (436)
Q Consensus 292 --~-~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-------~~~~~r~~~~~~~~~~i~~~~~~~~~~ 357 (436)
+ ... ....+-|+..+....+.+++| |+|+|.|+...+.. ..+..|.+|++..+..+.+++++|..+
T Consensus 419 ~~~~t~~gWl~i~P~GLr~~L~~i~~rY~~PpI~ITENG~~~~d~~~~~~~g~v~D~~RI~Yl~~hL~~v~~AI~dGVdV 498 (565)
T 1v02_A 419 IGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLGADV 498 (565)
T ss_dssp SSCBCSSSSCBCCTHHHHHHHHHHHHHSCCCCEEEEEECCCEECSSCCCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCcCCCCCcccChHHHHHHHHHHHHhcCCCceEEeccCCCcccccccCccccccChHHHHHHHHHHHHHHHHHHCCCCE
Confidence 0 000 112233555555555558886 99999999753210 245789999999999999999999999
Q ss_pred cceeecccccCCCCCCCCCc
Q 013811 358 AGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 358 ~G~~~W~~~~~g~~~~~dg~ 377 (436)
.|++.|++.|+. +|.+||
T Consensus 499 ~GY~~WSllDnf--EW~~Gy 516 (565)
T 1v02_A 499 RGYFAWSLLDNF--EWSSGY 516 (565)
T ss_dssp EEEEEECSBCCC--CGGGGG
T ss_pred EEEEECcCcccc--ccccCC
Confidence 999999999984 476654
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=177.01 Aligned_cols=276 Identities=15% Similarity=0.200 Sum_probs=183.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 72 Y~~~~eDi~lm~~~G~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 139 (490)
T 1cbg_A 72 YHRYKEDIGIMKDMNLDAYRFSI----SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFH-WD------- 139 (490)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEEecc----cHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------
Confidence 46899999999999999999833 488899987 8999999999999999999999999999975 33
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 140 ~P~~L~~~ygg--------w~~~~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~ 201 (490)
T 1cbg_A 140 VPQALEDEYRG--------FLGRNIVDDFRDYAELCFKE--------FGDR--VKHWITLNEPWGVSMNAYAYGTFAPGR 201 (490)
T ss_dssp CBHHHHHHHCG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CCHhHHhhcCC--------cCCchHHHHHHHHHHHHHHH--------hCCc--ceEEEEccCchhhhhcccccCccCCcc
Confidence 25565543 42 67788999999999999999 9997 78999999997531 00
Q ss_pred -C-------------hHHHHHHH------HHHHHHhhccC---CCCEEEe--CCCcccCCCC-Ccc--------------
Q 013811 212 -S-------------GRTIQAWI------TEMASYVKSID---RNHLLEA--GLEGFYGQST-PQR-------------- 251 (436)
Q Consensus 212 -~-------------~~~~~~w~------~~~~~~Ir~~D---p~~lV~v--G~~g~~~~~~-~~~-------------- 251 (436)
+ .+.++.-. ..+.+.+|+.. |+-.|.+ ....++..+. ++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~h~~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~~~~p~D~~aa~~~~~~~~~~ 281 (490)
T 1cbg_A 202 CSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGW 281 (490)
T ss_dssp CCGGGCSCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHH
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEEecCCceecCCCCHHHHHHHHHHHHHHHHH
Confidence 0 12222222 33456667653 5544433 2212222211 110
Q ss_pred ------ccCCCC------------CcccchhhhhcCCCCcceEEeecCCCCCCC------C--CCh--------------
Q 013811 252 ------KRVNPN------------LDIGTDFVANNLIPGIDFATVHSYPDQWLS------S--SND-------------- 291 (436)
Q Consensus 252 ------~~~np~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~------~--~~~-------------- 291 (436)
....|. +.. .|. ... ...+||+++++|...... . ...
T Consensus 282 f~dp~~~G~YP~~~~~~~~~~~p~~~~-~d~-~~i-~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (490)
T 1cbg_A 282 FMHPLTKGRYPESMRYLVRKRLPKFST-EES-KEL-TGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNG 358 (490)
T ss_dssp HHHHHHHSSCCHHHHHHHGGGSCCCCH-HHH-HHH-TTCCSEEEEECCCEEEEEECCCCTTCCCCHHHHTCEEEESEETT
T ss_pred HHHHhhCCCCCHHHHHHHHhcCCCCCH-HHH-HHh-CCCCCEEEEecCcCeEEecCCCCCccccccccCCccccccccCC
Confidence 011111 000 000 011 246899999999642110 0 000
Q ss_pred ----h-HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-------CChHHHHHHHHHHHHHHHHHhhcCC
Q 013811 292 ----R-DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-------YSTYQRDVMFNTVYYKIYSSAKRGG 355 (436)
Q Consensus 292 ----~-~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-------~~~~~r~~~~~~~~~~i~~~~~~~~ 355 (436)
+ ... ....+-|+..+....+.+++| |+|+|.|+...+.. ..+..|.+|++..+..+.+++++|.
T Consensus 359 ~~~~~~t~~gWl~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv 438 (490)
T 1cbg_A 359 KPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIGDGV 438 (490)
T ss_dssp EESSCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEECCTTSCHHHHHCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCCCCCCccChHHHHHHHHHHHHhcCCCcEEEEcCCcCcccccccccccccCCHHHHHHHHHHHHHHHHHHHCCC
Confidence 0 000 112233555555555558887 99999999753210 1357899999999999999999999
Q ss_pred CccceeecccccCCCCCCCCCc
Q 013811 356 AAAGGLFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 356 ~~~G~~~W~~~~~g~~~~~dg~ 377 (436)
.+.|++.|++.|+. +|.+||
T Consensus 439 ~V~GY~~WSllDnf--eW~~Gy 458 (490)
T 1cbg_A 439 NVKGYFAWSLFDNM--EWDSGY 458 (490)
T ss_dssp CEEEEEESCSBCCC--CGGGTT
T ss_pred CEEEEEeccccccc--chhccc
Confidence 99999999999984 476654
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=177.52 Aligned_cols=277 Identities=15% Similarity=0.215 Sum_probs=181.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+++++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+ .|
T Consensus 69 YhrY~eDi~lm~elG~~~yRfsI----~WsRI~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~d-------lP 136 (488)
T 3gnp_A 69 YHRFEEDIQLMADMGMDAYRFSI----AWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH-WD-------LP 136 (488)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC----CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhHHHHHHHHHHcCCCEEEecc----cHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCC-CC-------CC
Confidence 47899999999999999999832 488899987 8999999999999999999999999999986 43 25
Q ss_pred hHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---C
Q 013811 146 NWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---S 212 (436)
Q Consensus 146 ~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~ 212 (436)
.|.... |+ |.+++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+ +
T Consensus 137 ~~L~~~yGG--------W~n~~~v~~F~~Ya~~~~~~--------fgd~--Vk~W~T~NEp~~~~~~gy~~G~~~Pg~~~ 198 (488)
T 3gnp_A 137 QALEDKYKG--------WLDRQIVDDFAAYAETCFRE--------FGDR--VKHWITLNEPHTVAIQGYDAGLQAPGRCS 198 (488)
T ss_dssp HHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCCC
T ss_pred HHHHHHhCC--------CCCHHHHHHHHHHHHHHHHH--------hCCC--CCEEEEccCcchhhhhchhcccCCccccc
Confidence 565542 43 77899999999999999999 9984 67899999997421 00 0
Q ss_pred -------------hHHHHHHH------HHHHHHhhccC---CCCEEEeCC--CcccCCCC-Ccc----------------
Q 013811 213 -------------GRTIQAWI------TEMASYVKSID---RNHLLEAGL--EGFYGQST-PQR---------------- 251 (436)
Q Consensus 213 -------------~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~--~g~~~~~~-~~~---------------- 251 (436)
.+.++.-. ..+++.+|+.. |+-.|.+-. ..++..+. ++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~~~D~~Aa~~~~~~~~~~f~ 278 (488)
T 3gnp_A 199 VLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFA 278 (488)
T ss_dssp TTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHH
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCcceecCCcCHHHHHHHHHHHHHhhhhhh
Confidence 12233322 23345567665 455554322 11222111 100
Q ss_pred ----ccCCCC------------CcccchhhhhcCCCCcceEEeecCCCCCC---CCC--C--h-----------------
Q 013811 252 ----KRVNPN------------LDIGTDFVANNLIPGIDFATVHSYPDQWL---SSS--N--D----------------- 291 (436)
Q Consensus 252 ----~~~np~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~---~~~--~--~----------------- 291 (436)
....|. +.. .|. ......+||+++++|..... ... . .
T Consensus 279 dp~~~G~YP~~~~~~~~~~~p~~~~-~d~--~~i~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (488)
T 3gnp_A 279 DPFFFGDYPATMRARVGERLPRFTA-DEA--AVVKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNG 355 (488)
T ss_dssp HHHHHSSCCHHHHHHHGGGSCCCCH-HHH--HHHTTCCSEEEEECCCEEEEEECCCCCCTGGGCCHHHHHTEEEESEETT
T ss_pred cceeCcccCHHHHHHHHhcCCCCCH-HHH--HhcCCCCCEEEEecccCceeccCCCCcccccccccccCcccccccccCC
Confidence 011110 000 000 01125789999999953210 000 0 0
Q ss_pred ----h-HhHH---HHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHh-hcC
Q 013811 292 ----R-DQLS---FLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSA-KRG 354 (436)
Q Consensus 292 ----~-~~~~---~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~-~~~ 354 (436)
+ .... ...+-|+..+....+.+++| |+|+|.|+...+. ...+..|.+|++..+..+.+++ ++|
T Consensus 356 ~~~~~~t~~~W~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dG 435 (488)
T 3gnp_A 356 KPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDG 435 (488)
T ss_dssp EESSCBCSSTTCBCCTHHHHHHHHHHHHHHTSCCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCCCCCceEcHHHHHHHHHHHHHHcCCCCEEEECCCcCcCCCccccccCccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 0001 11222444444444447765 9999999975431 1236789999999999999999 889
Q ss_pred CCccceeecccccCCCCCCCCCce
Q 013811 355 GAAAGGLFWQLLTEGMDAFRDGYE 378 (436)
Q Consensus 355 ~~~~G~~~W~~~~~g~~~~~dg~~ 378 (436)
..+.|++.|++.|+. +|..||.
T Consensus 436 v~v~GY~~WSl~Dnf--eW~~Gy~ 457 (488)
T 3gnp_A 436 CDVRGYFAWSLLDNW--EWAAGYS 457 (488)
T ss_dssp CCEEEEEEECSBCCC--CGGGGGG
T ss_pred CCEEEEEecccchhh--hhhcccc
Confidence 999999999999984 5766643
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-19 Score=182.06 Aligned_cols=276 Identities=14% Similarity=0.130 Sum_probs=182.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 96 Y~~y~eDi~lm~~lG~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H-~d------- 163 (532)
T 2jf7_A 96 YHMYKEDIKIMKQTGLESYRFSI----SWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFH-WD------- 163 (532)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHcCCCeEeccc----cHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------
Confidence 46799999999999999999833 488899987 9999999999999999999999999999975 33
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 164 ~P~~L~~~ygg--------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~ 225 (532)
T 2jf7_A 164 LPQALEDEYGG--------FLSHRIVDDFCEYAEFCFWE--------FGDK--IKYWTTFNEPHTFAVNGYALGEFAPGR 225 (532)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HGGG--CSEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CCHHHHhhcCC--------CCCchHHHHHHHHHHHHHHH--------hCCc--CceEEEccCchhhhcccccccccCCcc
Confidence 25565542 32 67889999999999999999 9987 78999999997521 00
Q ss_pred ---------ChHHHHHHH------HHHHHHhhccC---CCCEEEe--CCCcccCCCC-Ccc-------------c-----
Q 013811 212 ---------SGRTIQAWI------TEMASYVKSID---RNHLLEA--GLEGFYGQST-PQR-------------K----- 252 (436)
Q Consensus 212 ---------~~~~~~~w~------~~~~~~Ir~~D---p~~lV~v--G~~g~~~~~~-~~~-------------~----- 252 (436)
....++.-. ..+.+.+|+.. |+-.|.+ ....++..+. +.. +
T Consensus 226 ~s~~~~~~~~~~~~~a~Hh~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~~~~p~D~~AA~~~~~~~~~~fldp~ 305 (532)
T 2jf7_A 226 GGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGWFLEPL 305 (532)
T ss_dssp SSTTCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHHTHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEecCCeeecCCCCHHHHHHHHHHHHHHHHHhhhHh
Confidence 111222222 33456667753 5544433 2212222211 100 0
Q ss_pred --cCCCC------------CcccchhhhhcCCCCcceEEeecCCCCCCC---C--C---Ch------------------h
Q 013811 253 --RVNPN------------LDIGTDFVANNLIPGIDFATVHSYPDQWLS---S--S---ND------------------R 292 (436)
Q Consensus 253 --~~np~------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~---~--~---~~------------------~ 292 (436)
...|. +.. .|. ... ...+||+++++|...... . . .. +
T Consensus 306 ~~G~YP~~~~~~~~~~lp~~~~-~d~-~~i-~~~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 382 (532)
T 2jf7_A 306 TTGDYPKSMRELVKGRLPKFSA-DDS-EKL-KGCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKPIGH 382 (532)
T ss_dssp HHSSCCHHHHHHHGGGSCCCCH-HHH-HHH-TTCCSCEEEEECCEEEEEECCC-----CCHHHHSCEEEESBSSSCBSSE
T ss_pred hCCCCCHHHHHHHHhcCCCCCH-HHH-HHh-cCCCCEEEEccCcCcEeecCCCCccccccccCCCccccccccCCCCCCC
Confidence 11111 000 000 011 246899999999642110 0 0 00 0
Q ss_pred -HhHHH---HHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 293 -DQLSF---LNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 293 -~~~~~---~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
....| ...-|+..+....+.+++| |+|+|.|+...+. ...+..|.+|++..+..+.+++.+|..+.|+
T Consensus 383 ~t~~gW~~I~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~g~v~D~~RI~Yl~~hl~~~~~Ai~dGv~V~GY 462 (532)
T 2jf7_A 383 ALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGVNVKGY 462 (532)
T ss_dssp ECTTSSCEECHHHHHHHHHHHHHHHCCSCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCcccCcHHHHHHHHHHHHhcCCCeEEEEecCCCCcccccccccCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 00011 2333555555555457887 9999999975321 1245789999999999999999999999999
Q ss_pred eecccccCCCCCCCCCc
Q 013811 361 LFWQLLTEGMDAFRDGY 377 (436)
Q Consensus 361 ~~W~~~~~g~~~~~dg~ 377 (436)
+.|++.|+. +|.+||
T Consensus 463 ~~WSliDnf--eW~~Gy 477 (532)
T 2jf7_A 463 FVWSFFDNF--EWNLGY 477 (532)
T ss_dssp EEECSBCCC--CGGGTT
T ss_pred EeccCcccc--chhccc
Confidence 999999984 476654
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=173.51 Aligned_cols=277 Identities=15% Similarity=0.192 Sum_probs=180.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|++|+++.++||.++++|.+ |+
T Consensus 61 Y~~y~eDi~lm~~lG~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 128 (473)
T 3ahy_A 61 YNRTAEDIALLKSLGAKSYRFSI----SWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFH-WD------- 128 (473)
T ss_dssp GGCHHHHHHHHHHHTCSEEEEEC----CHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEEccc----cHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------
Confidence 47899999999999999999833 488899987 8999999999999999999999999999975 32
Q ss_pred hhhHHhhc-CCCCCCCCCCCCC-hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC-
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRN-PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~- 211 (436)
.|.|.... |. |.+ ++..+.|.+|++.+++| | +. |..|.+.|||.+.. .+
T Consensus 129 ~P~~L~~~ygg--------w~~~~~~~~~f~~ya~~~~~~--------~-dr--V~~W~t~NEp~~~~~~gy~~G~~~Pg 189 (473)
T 3ahy_A 129 LPEGLHQRYGG--------LLNRTEFPLDFENYARVMFRA--------L-PK--VRNWITFNEPLCSAIPGYGSGTFAPG 189 (473)
T ss_dssp CBHHHHHHHCG--------GGCTTHHHHHHHHHHHHHHHH--------C-TT--CCEEEEEECHHHHHHHHHTTCCSTTC
T ss_pred CCHHHHhhcCC--------CcCchhhHHHHHHHHHHHHHH--------h-Cc--CCEEEecCchhhhhccccccccCCCc
Confidence 35666543 32 667 89999999999999999 9 64 78999999998531 01
Q ss_pred --C-hHHHHHH------HHHHHHHhhccCC----CCEEEe--CCCcccCCC--CCcc--------------------ccC
Q 013811 212 --S-GRTIQAW------ITEMASYVKSIDR----NHLLEA--GLEGFYGQS--TPQR--------------------KRV 254 (436)
Q Consensus 212 --~-~~~~~~w------~~~~~~~Ir~~Dp----~~lV~v--G~~g~~~~~--~~~~--------------------~~~ 254 (436)
+ ...++.- ...+.+.+|+..| +-.|.+ ....++..+ .++. ...
T Consensus 190 ~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~~IGi~l~~~~~~P~~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~ 269 (473)
T 3ahy_A 190 RQSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYLGD 269 (473)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHTCCTTSCCEEEEEEECCEEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHHSS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEEeCCeeeeCCCCCHHHHHHHHHHHHHhhhhhcchhccCC
Confidence 1 1222222 2344567787654 434432 222222221 1110 011
Q ss_pred CCCC--c-ccc---hhhh---hcCCCCcceEEeecCCCCCCC--------C---C-------Ch------h-HhHHH---
Q 013811 255 NPNL--D-IGT---DFVA---NNLIPGIDFATVHSYPDQWLS--------S---S-------ND------R-DQLSF--- 297 (436)
Q Consensus 255 np~~--~-~g~---df~~---~~~~~~iD~~s~H~Y~~~w~~--------~---~-------~~------~-~~~~~--- 297 (436)
.|.. . .+. .|.. ......+||+++++|...... . . .. + ....|
T Consensus 270 YP~~~~~~~~~~~p~~~~~d~~~i~~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~~i 349 (473)
T 3ahy_A 270 YPASMRKQLGDRLPTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRP 349 (473)
T ss_dssp CCHHHHHHHGGGSCCCCHHHHHHHTTCCSSEEEECCCEEEEEECSSCCCTTCCSSSEEEESBCTTCCBSCCCCSSTTCCC
T ss_pred CCHHHHHHHHhhCCCCCHHHHHHhcCCCCEEEEecccCeEEecCCCCCCcccCCCcccccccccCCCCCCCcCCCCCccc
Confidence 1110 0 000 0000 011246899999999632100 0 0 00 0 00111
Q ss_pred HHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccC
Q 013811 298 LNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~ 368 (436)
..+-|+..+....+.+++| |+|+|.|+...+. ...+..|.+|++..+..+.+++ ++|..+.|++.|++.|+
T Consensus 350 ~P~GL~~~L~~~~~rY~~Ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn 429 (473)
T 3ahy_A 350 CAAGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFAWSLMDN 429 (473)
T ss_dssp CHHHHHHHHHHHHHHHTSCCEEEEEECCCCTTGGGSCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSSCC
T ss_pred CcHHHHHHHHHHHHhcCCCcEEEEecCccccCccccccccccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECcCccc
Confidence 2333555555555457887 9999999975321 0235789999999999999999 88999999999999998
Q ss_pred CCCCCCCC
Q 013811 369 GMDAFRDG 376 (436)
Q Consensus 369 g~~~~~dg 376 (436)
. +|..|
T Consensus 430 f--eW~~G 435 (473)
T 3ahy_A 430 F--EWADG 435 (473)
T ss_dssp C--CGGGT
T ss_pred c--ccccC
Confidence 4 36544
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=179.71 Aligned_cols=280 Identities=15% Similarity=0.201 Sum_probs=172.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC----------------------------CCCChhhhhhHHHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP----------------------------GSYNEQMFKGLDFVIA 118 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p----------------------------g~~~~~~l~~lD~~i~ 118 (436)
-+++++|++.||++|+|+.|+-+ .|+++.|.. |..|++.++.++++|+
T Consensus 60 Yh~y~eDi~l~~elG~~~yRfSI----sWsRI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid 135 (489)
T 1uwi_A 60 WGNYKTFHNNAQKMGLKIARLNS----EWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFK 135 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCCCEEEEeC----cHHHCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 36789999999999999999832 255555432 5689999999999999
Q ss_pred HHHHcCCEEEEecccCCCCCCChhhhhhHHhh-----cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 119 EARKYGIKLILSLANNYDSFGGKKQYVNWARS-----QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 119 ~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~-----~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
++.++||..+++|++ |+. |.|... .|. . ....=|.|++..+.|.+|.+.+.+| |++.
T Consensus 136 ~Ll~~GIeP~VTL~H-~Dl-------P~~L~d~y~~~~g~-~-~~~GGW~n~~~v~~F~~YA~~~f~~--------fgdr 197 (489)
T 1uwi_A 136 DLKSRGLYFIQNMYH-WPL-------PLWLHDPIRVRRGD-F-TGPSGWLSTRTVYEFARFSAYTAWK--------FDDL 197 (489)
T ss_dssp HHHHTTCEEEEESCC-SCC-------BGGGBCHHHHHTTC-C-SSCBGGGSHHHHHHHHHHHHHHHHH--------HTTT
T ss_pred HHHHcCCcceEEeec-CCc-------cHHHHHhhhhcccc-c-ccCCCcCCHHHHHHHHHHHHHHHHH--------hCCc
Confidence 999999999999976 432 444321 010 0 0011278999999999999999999 9995
Q ss_pred CcEEEEEeecCCCCCC-----------CC---ChH-HHHH------HHHHHHHHhhccCCCCE-EEeCCCcccCCCC-Cc
Q 013811 194 PTIMAWELMNEPRCTS-----------DP---SGR-TIQA------WITEMASYVKSIDRNHL-LEAGLEGFYGQST-PQ 250 (436)
Q Consensus 194 p~I~~weL~NEp~~~~-----------~~---~~~-~~~~------w~~~~~~~Ir~~Dp~~l-V~vG~~g~~~~~~-~~ 250 (436)
|-.|...|||++.. .+ +.. ..+. -...+.+.+|+..+..+ |++....++..+. +.
T Consensus 198 --Vk~W~T~NEp~~~~~~gy~~~~~~~~pg~~~~~~~~~a~h~~llAha~a~~~~r~~~~~~iGi~~~~~~~~P~~~~d~ 275 (489)
T 1uwi_A 198 --VDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDM 275 (489)
T ss_dssp --CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEESSTTCH
T ss_pred --cCeEEEecCchheccccccccccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHhcccccceeeeeccccccCCCccCH
Confidence 66899999997521 01 111 1111 12334566777765532 1121111222111 00
Q ss_pred c-----------ccCCCC----Cc-ccchhhhhcCCCCcceEEeecCCCCC--------------CCCC--------Chh
Q 013811 251 R-----------KRVNPN----LD-IGTDFVANNLIPGIDFATVHSYPDQW--------------LSSS--------NDR 292 (436)
Q Consensus 251 ~-----------~~~np~----~~-~g~df~~~~~~~~iD~~s~H~Y~~~w--------------~~~~--------~~~ 292 (436)
. +..+|. +. ....+........+||+++++|.... .... ..+
T Consensus 276 ~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~g~~DFiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (489)
T 1uwi_A 276 EAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSVSLAGLP 355 (489)
T ss_dssp HHHHHHHHHHTHHHHHHHHTCEEEETTEEEECTTTTTCCSCEEEEEEEEEEEEEETTEEEECTTSTTSSCTTSBCTTSCB
T ss_pred HHHHHHHhhhcccccCccccCccccccceeeecccCCccCcceeccceeeeeecCCCcccCCCCcCcccccccccCCCcc
Confidence 0 000000 00 00011112234578999999994110 0000 000
Q ss_pred -H--hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 293 -D--QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 293 -~--~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
. ..+...+-|+..+....+.+++||+|+|.|+... .+..|..|++..+..+.+++++|..+.|++.|++.|+.
T Consensus 356 ~t~~gW~i~P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~----~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dnf 431 (489)
T 1uwi_A 356 TSDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADD----ADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNY 431 (489)
T ss_dssp BCTTCCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCS----SCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC
T ss_pred ccCCCCeechHHHHHHHHHHHHhhCCCEEEecCCCCCC----CchHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchHhh
Confidence 0 0011112233333333334799999999999754 34579999999999999999999999999999999984
Q ss_pred CCCCCCC
Q 013811 370 MDAFRDG 376 (436)
Q Consensus 370 ~~~~~dg 376 (436)
+|..|
T Consensus 432 --EW~~G 436 (489)
T 1uwi_A 432 --EWASG 436 (489)
T ss_dssp --CGGGG
T ss_pred --Chhhh
Confidence 46554
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=174.66 Aligned_cols=280 Identities=16% Similarity=0.246 Sum_probs=182.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+++++|++.||++|+|+.|+- . .|++++|.. |.+|++.++.+|++|+++.++||.++++|++ |+
T Consensus 87 YhrykEDi~Lm~elG~~~yRfS-I---sWsRI~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~H-wD------- 154 (505)
T 3ptm_A 87 YHLYKEDVRLMKDMGMDAYRFS-I---SWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFH-WD------- 154 (505)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-C---CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHcCCCEEEee-c---cHHHcCcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC-------
Confidence 4789999999999999999983 2 488888876 7899999999999999999999999999976 43
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++.. .+
T Consensus 155 lP~~L~~~yGG--------W~nr~~v~~F~~YA~~~f~~--------fgDr--Vk~W~T~NEp~~~~~~gy~~G~~~Pg~ 216 (505)
T 3ptm_A 155 SPQALEDKYNG--------FLSPNIINDFKDYAEICFKE--------FGDR--VKNWITFNEPWTFCSNGYATGLFAPGR 216 (505)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CcHHHHHhcCC--------cCCHHHHHHHHHHHHHHHHH--------hCcc--CceEEEecCcchhhhccccccccCCcc
Confidence 25565542 43 78899999999999999999 9985 67899999997421 00
Q ss_pred -C-------------hHHHHHHH------HHHHHHhhccC---CCCEEEeCC--CcccCCCC-Ccc--------------
Q 013811 212 -S-------------GRTIQAWI------TEMASYVKSID---RNHLLEAGL--EGFYGQST-PQR-------------- 251 (436)
Q Consensus 212 -~-------------~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~--~g~~~~~~-~~~-------------- 251 (436)
+ .+.++.-. ..+++.+|+.. |+-.|.+-. ..++..+. ++.
T Consensus 217 ~~~~~~~~~~~g~~~~~~~~a~hh~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~~~~~~D~~Aa~~~~~~~~~~ 296 (505)
T 3ptm_A 217 CSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGW 296 (505)
T ss_dssp CCTTSTTCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHH
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEecCceeecCCCCHHHHHHHHHHHHHHhhh
Confidence 0 12222222 23355667665 455554322 11222111 100
Q ss_pred ------ccCCCCC-c--cc---chhh---hhcCCCCcceEEeecCCCCCC---CC-C----Ch-----------------
Q 013811 252 ------KRVNPNL-D--IG---TDFV---ANNLIPGIDFATVHSYPDQWL---SS-S----ND----------------- 291 (436)
Q Consensus 252 ------~~~np~~-~--~g---~df~---~~~~~~~iD~~s~H~Y~~~w~---~~-~----~~----------------- 291 (436)
....|.. . .+ ..|. .......+||+++++|..... .. . ..
T Consensus 297 f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~ik~~~DFiGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (505)
T 3ptm_A 297 FMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPI 376 (505)
T ss_dssp HHHHHHTSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCCCSSCCCHHHHTCEEEESEETTEES
T ss_pred hhhheecccCCHHHHHHHhhcCCCCCHHHHHHhcCCCCEEEEeccccceEecCCCCCccccCccccccceeecccCCCcC
Confidence 0111100 0 00 0000 001125689999999953210 00 0 00
Q ss_pred -h-HhHHH---HHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCC-------CCChHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013811 292 -R-DQLSF---LNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDP-------GYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358 (436)
Q Consensus 292 -~-~~~~~---~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~~i~~~~~~~~~~~ 358 (436)
+ ....| ..+-|+..+....+.+++| |+|+|.|+...+. ...+..|.+|++..+..+.+++.+|..+.
T Consensus 377 ~~~t~~~W~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~~~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~ 456 (505)
T 3ptm_A 377 GPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVK 456 (505)
T ss_dssp SCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCcCCCCCceeCHHHHHHHHHHHHHHcCCCcEEEeCCCCCcCCCcccCccCccCCHHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 0 00011 1223455555554457776 9999999975431 12357899999999999999999999999
Q ss_pred ceeecccccCCCCCCCCCce
Q 013811 359 GGLFWQLLTEGMDAFRDGYE 378 (436)
Q Consensus 359 G~~~W~~~~~g~~~~~dg~~ 378 (436)
|++.|++.|+. +|..||.
T Consensus 457 GY~~WSl~Dnf--eW~~Gy~ 474 (505)
T 3ptm_A 457 GYFAWSLLDNF--EWSNGYT 474 (505)
T ss_dssp EEEEECSBCCC--CGGGTTS
T ss_pred EEEEeeccccc--hhhcCcC
Confidence 99999999984 5766643
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-18 Score=175.24 Aligned_cols=280 Identities=16% Similarity=0.178 Sum_probs=183.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 76 Y~~~~eDi~lm~~lG~~~~R~si----sWsRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H-~d------- 143 (501)
T 1e4m_M 76 FSYWQKDIDVLDELNATGYRFSI----AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFH-WD------- 143 (501)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEEccc----cHHhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------
Confidence 47899999999999999999833 488899987 8999999999999999999999999999975 43
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 144 ~P~~L~~~ygg--------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~ 205 (501)
T 1e4m_M 144 LPQTLQDEYEG--------FLDPQIIDDFKDYADLCFEE--------FGDS--VKYWLTINQLYSVPTRGYGSALDAPGR 205 (501)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEESCTTHHHHHHHTSCSSTTCC
T ss_pred CCHHHHHhcCC--------CCCchHHHHHHHHHHHHHHH--------hCCC--CCEEEEecCchhhhccccccCccCCcc
Confidence 35566543 32 67889999999999999999 9987 78999999998531 00
Q ss_pred -C-------------hHHHHHHH------HHHHHHhhccCC--CCEEEeCCC--cccCCC-CC-cc--------------
Q 013811 212 -S-------------GRTIQAWI------TEMASYVKSIDR--NHLLEAGLE--GFYGQS-TP-QR-------------- 251 (436)
Q Consensus 212 -~-------------~~~~~~w~------~~~~~~Ir~~Dp--~~lV~vG~~--g~~~~~-~~-~~-------------- 251 (436)
+ ...++.-. ..+.+.+|+..| +-.|.+-.. .++..+ .+ ..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~a~hh~llAha~Av~~~r~~~~~~~~~IGi~l~~~~~~P~~~~~~~D~~aa~r~~~~~~~~ 285 (501)
T 1e4m_M 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGW 285 (501)
T ss_dssp CCTTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHSGGGCCEEECEEEEEEEEESSTTCHHHHHHHHHHHHHHTHH
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCCeeecCCCCcHHHHHHHHHHHHHHHHH
Confidence 0 12222222 334566777654 444432111 122211 11 10
Q ss_pred ------ccCCCCC--c-ccc---hhhh---hcCCCCcceEEeecCCCCCC---CC----CC----h--------------
Q 013811 252 ------KRVNPNL--D-IGT---DFVA---NNLIPGIDFATVHSYPDQWL---SS----SN----D-------------- 291 (436)
Q Consensus 252 ------~~~np~~--~-~g~---df~~---~~~~~~iD~~s~H~Y~~~w~---~~----~~----~-------------- 291 (436)
....|.. . .+. .|.. ......+||+++++|..... .. .. .
T Consensus 286 fldp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~~~~DFiGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (501)
T 1e4m_M 286 FMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGH 365 (501)
T ss_dssp HHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSSEEEEEEEEEEEEECCCCTTSTTCCGGGGGCEEEESBCTTSC
T ss_pred hhhHhhCCCCCHHHHHHHHhhCCCCCHHHHHHhCCCCCEEEEECccCeEEecCCCccccCcccccCCCCccccccccCCC
Confidence 0111110 0 000 0000 01124689999999953210 00 00 0
Q ss_pred ---h-HhH------HH---HHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-----CChHHHHHHHHHHHHHHHHHhh
Q 013811 292 ---R-DQL------SF---LNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-----YSTYQRDVMFNTVYYKIYSSAK 352 (436)
Q Consensus 292 ---~-~~~------~~---~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-----~~~~~r~~~~~~~~~~i~~~~~ 352 (436)
+ ... .| ...-|+..+....+.+++| |+|+|.|+...+.. ..+..|..|++..+..+.++++
T Consensus 366 ~~~~~~~~~~~~~~~W~~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~g~v~D~~Ri~Yl~~hl~~~~~Ai~ 445 (501)
T 1e4m_M 366 YIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIK 445 (501)
T ss_dssp BCSSEEECCSSCGGGCEECCTHHHHHHHHHHHHHTTSCCEEEEECCCCEETTSCHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccccccCCCceeCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCcCccCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 0 000 11 1233555555555558887 99999999754210 1357899999999999999999
Q ss_pred -cCCCccceeecccccCCCCCCCCCce
Q 013811 353 -RGGAAAGGLFWQLLTEGMDAFRDGYE 378 (436)
Q Consensus 353 -~~~~~~G~~~W~~~~~g~~~~~dg~~ 378 (436)
+|..+.|++.|++.|+. +|..||.
T Consensus 446 ~dGv~v~GY~~WSliDnf--eW~~Gy~ 470 (501)
T 1e4m_M 446 EKDVNVKGYLAWALGDNY--EFNKGFT 470 (501)
T ss_dssp HHCCCEEEEEEECSBCCC--BTTTBTS
T ss_pred hcCCCeEEEEEccccccc--chhcccc
Confidence 89999999999999984 4766643
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-18 Score=172.21 Aligned_cols=281 Identities=15% Similarity=0.192 Sum_probs=182.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+++++|++.||++|+|+.|+- . .|+++.|. +|.+|++.++.++++|+++.++||.++++|++ |+ .
T Consensus 65 Yhry~EDi~Lm~elG~~~yRfS-I---sWsRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H-~D-------l 132 (487)
T 3vii_A 65 YHLYKEDVKILKELGAQVYRFS-I---SWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH-WD-------L 132 (487)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-C---CHHHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHHHHHHHHHHHHcCCCEEEee-C---CHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEec-CC-------C
Confidence 4789999999999999999983 2 48888887 78999999999999999999999999999976 43 2
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC----------CC---
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS----------DP--- 211 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~----------~~--- 211 (436)
|.|....|+ |.|++..+.|.+|++.+++| |++. |-.|.+.||| +.. .+
T Consensus 133 P~~L~~~GG--------W~nr~~v~~F~~YA~~~f~~--------fgdr--Vk~W~T~NEp-~~~~~gy~~g~~~~Pg~~ 193 (487)
T 3vii_A 133 PQALQDLGG--------WPNLVLAKYSENYARVLFKN--------FGDR--VKLWLTFNEP-LTFMDGYASEIGMAPSIN 193 (487)
T ss_dssp BHHHHTTTS--------TTSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECH-HHHGGGGBCTTSSTTCCB
T ss_pred cHHHHHcCC--------CCCHHHHHHHHHHHHHHHHH--------hcCC--CCeEEEecCc-hhhhcccccccccCCccc
Confidence 455544343 78899999999999999999 9985 6789999999 521 01
Q ss_pred -Ch-HHHHHHH------HHHHHHhhccC---CCCEEEeCC--CcccCCCC-Ccc----------------------ccCC
Q 013811 212 -SG-RTIQAWI------TEMASYVKSID---RNHLLEAGL--EGFYGQST-PQR----------------------KRVN 255 (436)
Q Consensus 212 -~~-~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~--~g~~~~~~-~~~----------------------~~~n 255 (436)
+. +.++.-. ..+.+.+|+.. |+-.|.+-. ..++..+. ++. ....
T Consensus 194 ~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~p~D~~Aa~~~~~~~~~~f~dpi~~~~G~Y 273 (487)
T 3vii_A 194 TPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDY 273 (487)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSCHHHHHHHHHHHHHHTHHHHHHHHSSSCSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCccCCCCcCHHHHHHHHHHHHHhhhhhhhhHhccCCCC
Confidence 11 1222222 33456677765 354443322 11222111 100 0112
Q ss_pred CCC-----c-----cc------chhh---hhcCCCCcceEEeecCCCCCC---CC---CCh--------------h-HhH
Q 013811 256 PNL-----D-----IG------TDFV---ANNLIPGIDFATVHSYPDQWL---SS---SND--------------R-DQL 295 (436)
Q Consensus 256 p~~-----~-----~g------~df~---~~~~~~~iD~~s~H~Y~~~w~---~~---~~~--------------~-~~~ 295 (436)
|.. . .| ..|. .......+||+++++|..... .. ... + ...
T Consensus 274 P~~~~~~~~~~~~~~g~~~~~~p~~~~~d~~~i~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 353 (487)
T 3vii_A 274 PAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISAS 353 (487)
T ss_dssp CHHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHTTCCSCEEEECCCEEEEESSCCSCSSCHHHHHTCEEECCTTSCCCSS
T ss_pred CHHHHHHHHhhccccccccccCCCCCHHHHHHhcCCCcEEEEecccceeeccCCCCCCCCcccccccccccCCCCCCCcC
Confidence 210 0 00 0000 001124689999999963210 00 000 0 000
Q ss_pred ---HHHHHHHHHHHHHHHHhc-CCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHh-hcCCCccceeecccccCCC
Q 013811 296 ---SFLNNWLDTHIQDAEHIL-RKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSA-KRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 296 ---~~~~~~i~~~~~~a~~~~-~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~-~~~~~~~G~~~W~~~~~g~ 370 (436)
+...+-|+..+....+.+ ++||+|+|.|+..+. ...+..|..|++..+..+.+++ .+|..+.|++.|++.|+.
T Consensus 354 gW~~i~P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~g-~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dnf- 431 (487)
T 3vii_A 354 SWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNF- 431 (487)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHTSCCEEEEECCCCBSS-CSCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSBCCC-
T ss_pred cccccCHHHHHHHHHHHHHHcCCCCEEEecCCCCCCC-CcCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccc-
Confidence 112233444444444446 489999999997532 2457899999999999999999 788999999999999984
Q ss_pred CCCCCC----ceEEe
Q 013811 371 DAFRDG----YEIVL 381 (436)
Q Consensus 371 ~~~~dg----~~i~~ 381 (436)
+|..| |++++
T Consensus 432 -eW~~Gy~~RfGlvy 445 (487)
T 3vii_A 432 -EWLRGYSEKFGIYA 445 (487)
T ss_dssp -CGGGTTSSBCCSEE
T ss_pred -hhhcccccccCeEE
Confidence 46544 45555
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=99.77 E-value=7e-18 Score=172.25 Aligned_cols=279 Identities=16% Similarity=0.197 Sum_probs=182.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC--CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP--GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p--g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
.+.+++|++.|+++|+|++|+-+ .|++++|.+ |.+|++.++.+|.+|+++.++||.++++|++ |+ .
T Consensus 56 Y~~~~eDi~lm~~~G~~~~R~si----sWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~ 123 (469)
T 2e9l_A 56 YTLWEEDLKCIKQLGLTHYRFSL----SWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYH-FD-------L 123 (469)
T ss_dssp TTCHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHHHHHHHHHHHHhCCCeEEccc----cHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------C
Confidence 46799999999999999999833 488899987 9999999999999999999999999999975 43 3
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC----
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---- 211 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---- 211 (436)
|.|....|. |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. .+
T Consensus 124 P~~l~~~gg--------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 185 (469)
T 2e9l_A 124 PQTLEDQGG--------WLSEAIIESFDKYAQFCFST--------FGDR--VKQWITINEANVLSVMSYDLGMFPPGIPH 185 (469)
T ss_dssp BHHHHHTTG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEESCHHHHHHHHHTSCCSTTCCCC
T ss_pred CcchhhcCC--------CCCchHHHHHHHHHHHHHHH--------hcCc--CCEEEEccCcchhhcccccccccCCCcCc
Confidence 566654442 67899999999999999999 9987 78999999998531 01
Q ss_pred C-hHHHHHHH------HHHHHHhhccC---CCCEEEeCC--CcccCCC--CCcc--------------------c-cCCC
Q 013811 212 S-GRTIQAWI------TEMASYVKSID---RNHLLEAGL--EGFYGQS--TPQR--------------------K-RVNP 256 (436)
Q Consensus 212 ~-~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~--~g~~~~~--~~~~--------------------~-~~np 256 (436)
. .+.++.-. ..+.+.+|+.. |+-.|.+-. ...+..+ .++. . ...|
T Consensus 186 ~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~P~~~~~p~D~~aa~~~~~~~~~~f~dp~~~~G~YP 265 (469)
T 2e9l_A 186 FGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYP 265 (469)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEECEEEEEEEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHTTSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCCcccCCCCCCHHHHHHHHHHHHHHhhHHHHHHhcCCCCC
Confidence 1 12222222 33456667654 444443211 1122211 1110 0 1122
Q ss_pred CC-----cc-----c------chhh---hhcCCCCcceEEeecCCCCCCC-------CCChh-------------HhH--
Q 013811 257 NL-----DI-----G------TDFV---ANNLIPGIDFATVHSYPDQWLS-------SSNDR-------------DQL-- 295 (436)
Q Consensus 257 ~~-----~~-----g------~df~---~~~~~~~iD~~s~H~Y~~~w~~-------~~~~~-------------~~~-- 295 (436)
.. .. | ..|. .......+||+++++|...... ..... ...
T Consensus 266 ~~~~~~~~~~~~~~g~~~~~~p~~~~~d~~~i~~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~t~~gW 345 (469)
T 2e9l_A 266 EVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSWKNVDW 345 (469)
T ss_dssp HHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHTTCCSSEEEEEEEEEEEEECCCTTCCCSHHHHHTEEEECCTTCCEETT
T ss_pred HHHHHHHHHhhhhcccccccCCCCCHHHHHHhcCCCCEEEeecccceEEecCCCCCCCCCccCCcccccccCCCCCCCCc
Confidence 10 00 0 0000 0001246899999999532110 00000 000
Q ss_pred -HHHHHHHHHHHHHHHHhcCC-cEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHHhh-cCCCccceeecccccCCCC
Q 013811 296 -SFLNNWLDTHIQDAEHILRK-PILLAEFGKSRKDP-GYSTYQRDVMFNTVYYKIYSSAK-RGGAAAGGLFWQLLTEGMD 371 (436)
Q Consensus 296 -~~~~~~i~~~~~~a~~~~~k-Pv~i~EfG~~~~~~-g~~~~~r~~~~~~~~~~i~~~~~-~~~~~~G~~~W~~~~~g~~ 371 (436)
.....-|+..+....+.+++ ||+|+|.|+..+.. ...+..|..|++..+..+.++++ +|..+.|++.|++.|+.
T Consensus 346 ~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~d~~~~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~-- 423 (469)
T 2e9l_A 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNF-- 423 (469)
T ss_dssp EECCTHHHHHHHHHHHHHTTSCCEEEEEECCCEESSCCSSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSBCCC--
T ss_pred cccChHHHHHHHHHHHHHhCCCCEEEEecCCCCCcccccCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeccccccc--
Confidence 11223355555555545777 59999999973211 23567999999999999999999 89999999999999984
Q ss_pred CCCCCc
Q 013811 372 AFRDGY 377 (436)
Q Consensus 372 ~~~dg~ 377 (436)
+|..||
T Consensus 424 eW~~gy 429 (469)
T 2e9l_A 424 EWNQGY 429 (469)
T ss_dssp CGGGGG
T ss_pred chhccc
Confidence 476654
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=179.67 Aligned_cols=285 Identities=17% Similarity=0.231 Sum_probs=175.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC-----------------------------CCCChhhhhhHHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP-----------------------------GSYNEQMFKGLDFVI 117 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p-----------------------------g~~~~~~l~~lD~~i 117 (436)
-+.+++|++.||++|+|+.|+-+ .|+++.|.. |..|++.++.++++|
T Consensus 60 yh~y~eDi~l~~~mG~~~yRfSI----sWsRI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~li 135 (489)
T 4ha4_A 60 WGNYRKFHDAAQAMGLTAARIGV----EWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMF 135 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeec----cHHhcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 36789999999999999999832 366666642 346999999999999
Q ss_pred HHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc-----CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 118 AEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ-----GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 118 ~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~-----G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
+++.++||..+++|++ |+. |.|.... | .+.. ..=|.|++..+.|.+|.+.+.+| |++
T Consensus 136 d~Ll~~GIeP~VTL~H-~Dl-------P~~L~d~~~~~~g-~~~~-~GGW~n~~~v~~F~~YA~~~f~~--------fgd 197 (489)
T 4ha4_A 136 SDLRSRGITFILNLYH-WPL-------PLWLHDPIAIRRG-NLSA-PSGWLDVRTVIEFAKFSAYVAWK--------LDD 197 (489)
T ss_dssp HHHHHTTCEEEEESCS-SCC-------BTTTBCHHHHHTT-CTTS-CBGGGSHHHHHHHHHHHHHHHHH--------HGG
T ss_pred HHHHHcCCeeeEeecC-CCc-------hHHHhhhhccccc-cccc-CCCCCCHHHHHHHHHHHHHHHHH--------hCC
Confidence 9999999999999986 432 3333210 0 0000 12278899999999999999999 988
Q ss_pred CCcEEEEEeecCCCCCC-----------CC---ChH-H------HHHHHHHHHHHhhccCCCCEEEe-CCCcccCCCC-C
Q 013811 193 DPTIMAWELMNEPRCTS-----------DP---SGR-T------IQAWITEMASYVKSIDRNHLLEA-GLEGFYGQST-P 249 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~-----------~~---~~~-~------~~~w~~~~~~~Ir~~Dp~~lV~v-G~~g~~~~~~-~ 249 (436)
. |-.|...|||++.. .+ +.. . +..-..++.+.+|+..++.+-.+ ....++..+. +
T Consensus 198 r--Vk~W~T~NEp~~~~~~gy~~~~~~~~p~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~iGi~~~~~~~~P~~~~d 275 (489)
T 4ha4_A 198 L--VYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGRAMKNLVQAHARAYDAVKAITKKPVGVIYANSDFTPLTDAD 275 (489)
T ss_dssp G--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSGGG
T ss_pred c--cceEEEeccchhhhcccccccccCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeeccccccccchh
Confidence 5 66899999997421 01 111 1 11122345577888877643221 1111221111 0
Q ss_pred cc-----------ccCCCCC-cccchhhhhcCCCCcceEEeecCCCC--------------CCCC--------CChh-H-
Q 013811 250 QR-----------KRVNPNL-DIGTDFVANNLIPGIDFATVHSYPDQ--------------WLSS--------SNDR-D- 293 (436)
Q Consensus 250 ~~-----------~~~np~~-~~g~df~~~~~~~~iD~~s~H~Y~~~--------------w~~~--------~~~~-~- 293 (436)
.. ....|.. ..-...........+||+++++|... +... ...+ .
T Consensus 276 ~~aa~~~~~~~~~~f~d~~~~g~~p~~~~~~lk~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 355 (489)
T 4ha4_A 276 REAAERAKFDNRWAFFDAVVRGQLGGSTRDDLKGRLDWIGVNYYTRQVVRARGSGYEIVPGYGHGCEPNGVSPAGRPCSD 355 (489)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHCEETTEECTTTTTCCSCEEEEEEEEEEEEEETTEEEECTTSTTSSCTTCBCTTSCBBCT
T ss_pred HHHHHHHHHhhcccccChhhcCcCCcccchhccccccccccccccceeeecCCCccccCccccccccccccccCCCccCC
Confidence 00 0000000 00000001123467899999999311 0000 0000 0
Q ss_pred -hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCC
Q 013811 294 -QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDA 372 (436)
Q Consensus 294 -~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~ 372 (436)
..+....-|+..+....+.+++||+|+|.|+... .+..|..|++..+..+.+++++|..+.|++.|++.|+. +
T Consensus 356 ~gw~i~P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~----~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dnf--E 429 (489)
T 4ha4_A 356 FGWEFYPEGLYNVLKEYWDRYHLPLLVTENGIADE----GDYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNY--E 429 (489)
T ss_dssp TSCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCT----TCSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBCCC--C
T ss_pred CCceeccHHHHHHHHHHHhhcCCCEEEecCCCCCC----CChHHHHHHHHHHHHHHHHHHCCCCEEEEeecCchhhh--c
Confidence 0001112233333333334799999999999755 24579999999999999999999999999999999984 4
Q ss_pred CCCC----ceEEe
Q 013811 373 FRDG----YEIVL 381 (436)
Q Consensus 373 ~~dg----~~i~~ 381 (436)
|..| |++++
T Consensus 430 W~~Gy~~RfGliy 442 (489)
T 4ha4_A 430 WASGFSKRFGLLM 442 (489)
T ss_dssp GGGGGGSCCCSEE
T ss_pred hhhccccccceEE
Confidence 6554 55555
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-18 Score=176.01 Aligned_cols=111 Identities=17% Similarity=0.248 Sum_probs=95.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC---CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS---PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~---pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
-+++++|++.|+++|+|+.|+-+ .|+++.|. .|.+|++.++.++++|+++.++||..+++|++ |+
T Consensus 75 Yhry~EDi~Lm~elG~~~yRfSI----sWsRI~P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~d------- 142 (540)
T 4a3y_A 75 YHLYKEDVNILKNLGLDAYRFSI----SWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFH-WD------- 142 (540)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred hHhhHHHHHHHHHcCCCEEEeec----cHhhcccCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccC-CC-------
Confidence 47899999999999999999832 37788885 58899999999999999999999999999986 43
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCC
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC 207 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~ 207 (436)
.|.|.... |+ |.|++..+.|.+|++.+++| |++. |-.|...|||++
T Consensus 143 lP~~L~~~yGG--------W~nr~~v~~F~~Ya~~~f~~--------fgdr--Vk~W~T~NEP~~ 189 (540)
T 4a3y_A 143 VPQALEDEYGG--------FLSPRIVDDFCEYAELCFWE--------FGDR--VKHWMTLNEPWT 189 (540)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHH
T ss_pred CcHHHHhccCC--------cCChHHHHHHHHHHHHHHHH--------hccc--cCEeeEccccHH
Confidence 25566543 43 88999999999999999999 9996 668999999964
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-18 Score=176.79 Aligned_cols=180 Identities=16% Similarity=0.217 Sum_probs=138.0
Q ss_pred CCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhh
Q 013811 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF 110 (436)
Q Consensus 31 ~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l 110 (436)
..|++++..|++||||+.+.|.+.|+... .++.++++|+.||++|+|+||+.++ |..++|.||.||.+.+
T Consensus 6 r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~------~~e~w~~dl~~mK~~G~N~Vrt~v~----W~~hEP~~G~ydf~gl 75 (612)
T 3d3a_A 6 GTFEVGKNTFLLNGEPFVVKAAEIHYPRI------PKEYWEHRIKMCKALGMNTICLYVF----WNFHEPEEGRYDFAGQ 75 (612)
T ss_dssp CCEEECSSSEEETTEEECCEEEEECGGGS------CGGGHHHHHHHHHHHTCCEEEEECC----HHHHCSSTTCCCCSGG
T ss_pred ceEEEeCCEEEECCEEEEEEEEEecCccC------CHHHHHHHHHHHHHcCCCEEEEcCh----HHhcCCCCCccChhHH
Confidence 35899999999999999999999986642 2479999999999999999999876 6678999999999999
Q ss_pred hhHHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.++++++.|+++||+||+.+. ..|+ +||. |.|...... ...--.+|..+++++++++.|++|..
T Consensus 76 ~~l~~fl~la~e~GL~VIl~~gpyi~~ew~-~gG~---P~Wl~~~~~----~~~r~~dp~y~~~~~~~~~~l~~r~~--- 144 (612)
T 3d3a_A 76 KDIAAFCRLAQENGMYVIVRPGPYVCAEWE-MGGL---PWWLLKKKD----IKLREQDPYYMERVKLFLNEVGKQLA--- 144 (612)
T ss_dssp GCHHHHHHHHHHTTCEEEEECCSCCCTTBG-GGGC---CGGGGGSTT----CCSSSCCHHHHHHHHHHHHHHHHHHG---
T ss_pred HHHHHHHHHHHHCCCEEEEecCcccccccc-cCCC---chhhccCCC----ceecCCCHHHHHHHHHHHHHHHHHHh---
Confidence 9999999999999999999874 2243 3554 567543210 01112468899999999999999922
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccC-CCCEE
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSID-RNHLL 236 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D-p~~lV 236 (436)
+..+.++|+|++|+|.||+.+... . .+.++.+.+.+|+.| ++.+.
T Consensus 145 ~~~~~n~p~II~wqIeNEyg~yg~--~---~~y~~~l~~~l~~~g~~~vp~ 190 (612)
T 3d3a_A 145 DLQISKGGNIIMVQVENEYGAFGI--D---KPYISEIRDMVKQAGFTGVPL 190 (612)
T ss_dssp GGBGGGTSSEEEEECSSCGGGTCC--C---HHHHHHHHHHHHHHTCCSSCE
T ss_pred hhhhccCCCEEEEeecccccccCc--h---HHHHHHHHHHHHHcCCCchhh
Confidence 122346999999999999976421 1 344566677788876 45544
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.3e-17 Score=161.21 Aligned_cols=238 Identities=15% Similarity=0.143 Sum_probs=151.9
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC--CCCCCChhhhhhHH
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN--YDSFGGKKQYVNWA 148 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~--w~~~gg~~~y~~W~ 148 (436)
++.++.||++|+|+||+-+. .+|.+|.++ ++.++.+++.|+++||+|+|+||-. |.+.
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w-------~~P~~g~~~---~~~~~~~~~~A~~~GlkV~ld~Hysd~WadP---------- 89 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVW-------VNPADGNYN---LDYNIAIAKRAKAAGLGVYIDFHYSDTWADP---------- 89 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEEC-------SSCTTCTTS---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBT----------
T ss_pred ccHHHHHHHCCCCEEEEeee-------eCCCCCcCC---HHHHHHHHHHHHHCCCEEEEEeccCCCcCCc----------
Confidence 35789999999999999443 233456555 6788999999999999999999843 3221
Q ss_pred hhcCCCCCCCCCCCCC--hHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC------CChHHHHHH
Q 013811 149 RSQGQFLTSDDDFFRN--PVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD------PSGRTIQAW 219 (436)
Q Consensus 149 ~~~G~~~~~~~~f~~~--~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~------~~~~~~~~w 219 (436)
|.+ ..+.. |.+ +...+.+.+|.+.++++ +++. ..+.+++++||+..... ...+.+.++
T Consensus 90 ---g~Q-~~p~~-W~~~~~~~~~~~~~yt~~vl~~--------l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l 156 (332)
T 1hjs_A 90 ---AHQ-TMPAG-WPSDIDNLSWKLYNYTLDAANK--------LQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARL 156 (332)
T ss_dssp ---TBC-BCCTT-CCCSHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHH
T ss_pred ---ccc-CCccc-cccchHHHHHHHHHHHHHHHHH--------HHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHH
Confidence 111 01122 333 44566666777777766 4422 22346899999986321 134678899
Q ss_pred HHHHHHHhhccC--CCCEEEeCCCcccCCCCCccccCCCCCcccchh-hhhcC-----CCCcceEEeecCCCCCCCCCCh
Q 013811 220 ITEMASYVKSID--RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF-VANNL-----IPGIDFATVHSYPDQWLSSSND 291 (436)
Q Consensus 220 ~~~~~~~Ir~~D--p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df-~~~~~-----~~~iD~~s~H~Y~~~w~~~~~~ 291 (436)
+++.++.||+.+ |+..|++....... +..+ ..| ..... ...+|++++|+||. |......
T Consensus 157 ~~~~~~avR~~~~~p~~~v~ih~~~~~~---------~~~~---~~~~d~~~~~g~~~~~~~DvIG~syYp~-w~~~~~~ 223 (332)
T 1hjs_A 157 LHSAAWGIKDSSLSPKPKIMIHLDNGWD---------WGTQ---NWWYTNVLKQGTLELSDFDMMGVSFYPF-YSSSATL 223 (332)
T ss_dssp HHHHHHHHHTSCCSSCCEEEEEESCTTC---------HHHH---HHHHHHHHTTSSSCGGGCCEEEEECCSS-SCTTCCH
T ss_pred HHHHHHHHHHhccCCCCeEEEEeCCccc---------hHHH---HHHHHHHHhcCCCCCCCcCEEEEecCcc-cCCCCCH
Confidence 999999999999 99888875431100 0000 001 11111 23799999999996 5422221
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC-------------CChHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013811 292 RDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG-------------YSTYQRDVMFNTVYYKIYSSAKRGGAAA 358 (436)
Q Consensus 292 ~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g-------------~~~~~r~~~~~~~~~~i~~~~~~~~~~~ 358 (436)
+. +...++...+.++|||+|+|+|.+....+ .+++.|.+|++.+++.+.+. ..+.
T Consensus 224 ----~~----l~~~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~----~~~~ 291 (332)
T 1hjs_A 224 ----SA----LKSSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSV----SRGV 291 (332)
T ss_dssp ----HH----HHHHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS----TTEE
T ss_pred ----HH----HHHHHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhc----CCeE
Confidence 22 22233333323799999999999764211 35778899999888766443 2478
Q ss_pred ceeecccc
Q 013811 359 GGLFWQLL 366 (436)
Q Consensus 359 G~~~W~~~ 366 (436)
|.++|...
T Consensus 292 G~fyWep~ 299 (332)
T 1hjs_A 292 GLFYWEPA 299 (332)
T ss_dssp EEEEECTT
T ss_pred EEEEEccc
Confidence 99999854
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-18 Score=176.73 Aligned_cols=283 Identities=14% Similarity=0.189 Sum_probs=182.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC---CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP---GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p---g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+++++|++.||++|+|+.|+-+ .|++++|.. |.+|++.++.+|.+|+++.++||.++++|++ |+
T Consensus 75 YhrYkEDi~Lm~elG~~~yRfSI----sWsRI~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H-~d------- 142 (513)
T 4atd_A 75 YHLYKEDVNILKNLGLDAYRFSI----SWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFH-WD------- 142 (513)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHcCCCEEEEeC----cHHHcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC-------
Confidence 47899999999999999999832 488888876 7899999999999999999999999999976 43
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC------------C
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS------------D 210 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~------------~ 210 (436)
.|.|.... |+ |.|++..+.|.+|++.+++| |++. |-.|.+.|||++.. .
T Consensus 143 lP~~L~~~yGG--------W~nr~~v~~F~~YA~~~f~~--------fgdr--Vk~WiT~NEp~~~~~~gy~~G~~aPg~ 204 (513)
T 4atd_A 143 VPQALEDEYGG--------FLSPRIVDDFCEYAELCFWE--------FGDR--VKHWMTLNEPWTFSVHGYATGLYAPGR 204 (513)
T ss_dssp CBHHHHHHHCG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CcHHHHHHcCC--------cCCHHHHHHHHHHHHHHHHH--------hcCc--CceEEEccCcchhhccccccccCCCCc
Confidence 25565543 43 78899999999999999999 9985 67899999997421 0
Q ss_pred ----------------C--------------ChHHHHHHH------HHHHHHhhccC---CCCEEEeCCC--cccC-CC-
Q 013811 211 ----------------P--------------SGRTIQAWI------TEMASYVKSID---RNHLLEAGLE--GFYG-QS- 247 (436)
Q Consensus 211 ----------------~--------------~~~~~~~w~------~~~~~~Ir~~D---p~~lV~vG~~--g~~~-~~- 247 (436)
. ..+.++.-. ..+++.+|+.. |+-.|.+-.. .++. .+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~H~~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~~~~ 284 (513)
T 4atd_A 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDEN 284 (513)
T ss_dssp CCC-------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEEEEEEEESSTT
T ss_pred ccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCCceEEEEeecceeccCCCC
Confidence 0 011222222 23345566654 4444443221 1222 11
Q ss_pred CCcc--------------------ccCCCCC-c--cc---chhh---hhcCCCCcceEEeecCCCCCC---CC---C---
Q 013811 248 TPQR--------------------KRVNPNL-D--IG---TDFV---ANNLIPGIDFATVHSYPDQWL---SS---S--- 289 (436)
Q Consensus 248 ~~~~--------------------~~~np~~-~--~g---~df~---~~~~~~~iD~~s~H~Y~~~w~---~~---~--- 289 (436)
.++. ....|.. . .+ ..|. .......+||+++++|..... .. .
T Consensus 285 ~~~D~~Aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~ik~~~DFiGiNyYts~~v~~~~~~~~~~~~ 364 (513)
T 4atd_A 285 SASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNN 364 (513)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEEEEEEEEEEECC-------C
T ss_pred CHHHHHHHHHHHHHhhhccccceeccccCHHHHHHHHhcCCCCCHHHHHhccCCCcEEEEeccccceeccCCCCcccccc
Confidence 1110 0111100 0 00 0000 001124689999999952210 00 0
Q ss_pred -Ch------------------h-HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-------CChHHHHH
Q 013811 290 -ND------------------R-DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-------YSTYQRDV 338 (436)
Q Consensus 290 -~~------------------~-~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-------~~~~~r~~ 338 (436)
.. + ... +....-|+..+....+.+++| |+|+|.|+...+.. ..+..|.+
T Consensus 365 ~~~~~~~~~~~~~~~~g~p~~~~t~~gW~~i~P~GL~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~~~i~D~~Ri~ 444 (513)
T 4atd_A 365 FSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444 (513)
T ss_dssp CCHHHHTCEEEECEETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHHCCSSEEEEEECCCCCCCTTCCHHHHTCCHHHHH
T ss_pred CCcccccceeeecccCCCCCCCcCCCCCCeecHHHHHHHHHHHHHHcCCCcEEEeCCCCCccCccccCCCCccccHhHHH
Confidence 00 0 000 111223555555444447776 99999999764311 23578999
Q ss_pred HHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEe
Q 013811 339 MFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVL 381 (436)
Q Consensus 339 ~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~ 381 (436)
|++..+..+.+++.+|..+.|++.|++.|+. +|..| |++++
T Consensus 445 Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dnf--EW~~Gy~~RfGliy 489 (513)
T 4atd_A 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNF--EWGEGYGVRFGIIH 489 (513)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEESCSBCCC--CGGGTTSSCCCSEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEcccccch--hhhccccCccceEE
Confidence 9999999999999999999999999999984 45544 44544
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=183.72 Aligned_cols=162 Identities=17% Similarity=0.206 Sum_probs=118.7
Q ss_pred CCCC--EEeeCC--------eEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC
Q 013811 29 GDGF--IRTRGS--------HFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL 98 (436)
Q Consensus 29 ~~~f--v~v~g~--------~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l 98 (436)
..|| |+++++ +|.+||+|++++|+|++....... ..+++.++++|+.||++|+|+||+|.... +
T Consensus 304 ~~G~R~i~~~~~~d~~G~~f~f~lNG~~v~l~G~n~~~~~~~~~-~~~~~~~~~~l~~~k~~g~N~iR~wgg~~--y--- 377 (848)
T 2je8_A 304 RIGLRTIRVVNEKDKDGESFYFEVNGIPMFAKGANYIPQDALLP-NVTTERYQTLFRDMKEANMNMVRIWGGGT--Y--- 377 (848)
T ss_dssp EECCCCEEEECCEETTEECCEEEETTEEECEEEEEECCSCSSGG-GCCHHHHHHHHHHHHHTTCCEEEECTTSC--C---
T ss_pred eEEeEEEEEEecCCCCCceEEEEECCEEeEEEeEeecCchhccc-CCCHHHHHHHHHHHHHcCCcEEEeCCCcc--C---
Confidence 3455 677665 799999999999999753221111 13568899999999999999999974211 1
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 013811 99 QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTV 178 (436)
Q Consensus 99 q~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~i 178 (436)
.+ +.++++|.++||+|+.++.... ..+..++..++.+++.++++
T Consensus 378 -------~~------~~~~d~cD~~GilV~~e~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~ 421 (848)
T 2je8_A 378 -------EN------NLFYDLADENGILVWQDFMFAC-----------------------TPYPSDPTFLKRVEAEAVYN 421 (848)
T ss_dssp -------CC------HHHHHHHHHHTCEEEEECSCBS-----------------------SCCCCCHHHHHHHHHHHHHH
T ss_pred -------CC------HHHHHHHHHcCCEEEECccccc-----------------------CCCCCCHHHHHHHHHHHHHH
Confidence 11 4789999999999988764210 01124688889999999999
Q ss_pred HhccccccccccCCCCcEEEEEeecCCCCC-------CCCCh----HHH----HHHHHHHHHHhhccCCCCEEEeCC
Q 013811 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCT-------SDPSG----RTI----QAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 179 v~r~n~~tg~~yk~~p~I~~weL~NEp~~~-------~~~~~----~~~----~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
++| ++|||+|++|.+.||+... .+.+. ... ..+.+.+.+.||++||+++|+.++
T Consensus 422 v~r--------~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~v~~~S 490 (848)
T 2je8_A 422 IRR--------LRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSS 490 (848)
T ss_dssp HHH--------HTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSB
T ss_pred HHH--------hcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Confidence 999 9999999999999999532 00011 111 125567899999999999998875
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=181.27 Aligned_cols=210 Identities=13% Similarity=0.129 Sum_probs=157.0
Q ss_pred CEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhh
Q 013811 32 FIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFK 111 (436)
Q Consensus 32 fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~ 111 (436)
-|+.++..|++||||+++.|..+|+.... .++.++++|+.||++|+|+|++++| |+..||.||+||-+...
T Consensus 5 ~v~~d~~~~~idG~p~~l~sG~~hy~r~p-----~~~~W~d~l~kmka~G~NtV~~yvf----W~~hEP~~G~fdF~g~~ 75 (971)
T 1tg7_A 5 YVTWDEHSIFVNGERLMIFSGEVHPYRLP-----VASLYIDIFEKVKALGFNCVSFYVD----WALLEGNPGHYSAEGIF 75 (971)
T ss_dssp SEEECSSCEEETTEEECEEEEECCGGGSC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCCCGGG
T ss_pred eEEEcCCEEEECCeEEEEEEEEECcccCC-----chHHHHHHHHHHHHcCCCEEEEecc----HHHhCCCCCeecccchH
Confidence 48999999999999999999998765431 1378999999999999999999887 77789999999966666
Q ss_pred hHHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccc
Q 013811 112 GLDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTG 187 (436)
Q Consensus 112 ~lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg 187 (436)
.||++|+.|+++||+|||..- ..|. +|| .|.|...... .--.+||..+++.++++++|+++
T Consensus 76 dL~~fl~~a~e~Gl~ViLr~GPyi~aE~~-~GG---~P~WL~~~p~-----~lR~~~p~y~~~~~~~~~~l~~~------ 140 (971)
T 1tg7_A 76 DLQPFFDAAKEAGIYLLARPGPYINAEVS-GGG---FPGWLQRVDG-----ILRTSDEAYLKATDNYASNIAAT------ 140 (971)
T ss_dssp CSHHHHHHHHHHTCEEEEECCSCCCTTBG-GGG---CCGGGGGCSS-----CTTSSCHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHcCCEEEEecCCcccceec-CCC---cceeecccCC-----EecCCCHHHHHHHHHHHHHHHHH------
Confidence 799999999999999999763 2232 355 4667654211 11246899999999999999999
Q ss_pred cccCCC-----CcEEEEEeecCCCCCC-CCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCccc
Q 013811 188 IHYKDD-----PTIMAWELMNEPRCTS-DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIG 261 (436)
Q Consensus 188 ~~yk~~-----p~I~~weL~NEp~~~~-~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g 261 (436)
++.+ +.|++|++.||..+.. +.-++...++++.+++.+|+.+++.++++...+..... .|
T Consensus 141 --~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~-------~~----- 206 (971)
T 1tg7_A 141 --IAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHN-------AP----- 206 (971)
T ss_dssp --HHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTT-------CT-----
T ss_pred --HhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCCeeEEEecCcccccc-------cc-----
Confidence 5555 4899999999997642 11112356777888888899999998887643321110 11
Q ss_pred chhhhhcCCCCcceEEeecCCCC
Q 013811 262 TDFVANNLIPGIDFATVHSYPDQ 284 (436)
Q Consensus 262 ~df~~~~~~~~iD~~s~H~Y~~~ 284 (436)
......+|++++..||..
T Consensus 207 -----~~~~g~ldv~~~D~Yp~g 224 (971)
T 1tg7_A 207 -----GTGAGAVDIYGHDSYPLG 224 (971)
T ss_dssp -----TSCTTCCSBCEEEECTTC
T ss_pred -----ccccCceeEEecCCCccc
Confidence 012357889999999853
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=163.94 Aligned_cols=266 Identities=15% Similarity=0.146 Sum_probs=147.1
Q ss_pred hhhHHHHHHHHH-HCCCCEEEEccc-cCC-CCCCCcc--CCC--CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCC
Q 013811 67 RSKVSTAFHEAA-SHGLTVARTWAF-SDG-GYRPLQR--SPG--SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139 (436)
Q Consensus 67 ~~~~~~~l~~l~-~~G~N~vRi~~~-~d~-~~~~lq~--~pg--~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~g 139 (436)
+++++++|+.|+ ++|+|++|++.. +|+ ..-...+ .+| .|+ +..+|.+++.|+++||+++++|...
T Consensus 32 r~~~~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n---~~~~D~~~~~~~~~Gi~p~v~l~~~----- 103 (503)
T 1w91_A 32 QKEYLDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYN---FTYIDRIVDSYLALNIRPFIEFGFM----- 103 (503)
T ss_dssp BHHHHHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEEC---CHHHHHHHHHHHHTTCEEEEEECSB-----
T ss_pred CHHHHHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeec---cHHHHHHHHHHHHCCCEEEEEEcCC-----
Confidence 578999999997 899999999652 221 1101111 234 454 7789999999999999999998642
Q ss_pred ChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEE--EEEeecCCCCCCC---CChH
Q 013811 140 GKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM--AWELMNEPRCTSD---PSGR 214 (436)
Q Consensus 140 g~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~--~weL~NEp~~~~~---~~~~ 214 (436)
|.|..........-..-+++|+..+.|.++++.+++++- ..|+.. .|. .|+++|||+.... .+.+
T Consensus 104 -----P~~~~~~~~~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~----~ryg~~-~V~~W~wev~NEp~~~~~~~~~~~~ 173 (503)
T 1w91_A 104 -----PKALASGDQTVFYWKGNVTPPKDYNKWRDLIVAVVSHFI----ERYGIE-EVRTWLFEVWNEPNLVNFWKDANKQ 173 (503)
T ss_dssp -----CGGGBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHH----HHHCHH-HHHTSEEEECSCTTSTTTSGGGCHH
T ss_pred -----cHHHhCCCCceeecCCCCCCccCHHHHHHHHHHHHHHHH----hhcCch-hhceeeEEEeeCCCCccCCCCCCHH
Confidence 223211000000000112345555666666655554310 005532 265 7899999997421 1456
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCCCC--
Q 013811 215 TIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSN-- 290 (436)
Q Consensus 215 ~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~-- 290 (436)
.+.+++++++++||++||+..|. +.+.... .+.| -..|... .....+||+++|.|+..+....+
T Consensus 174 ~y~~~~~~~~~~ik~~~P~~~vg--gp~~~~~--------~~~w--~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~~~~ 241 (503)
T 1w91_A 174 EYFKLYEVTARAVKSVDPHLQVG--GPAICGG--------SDEW--ITDFLHFCAERRVPVDFVSRHAYTSKAPHKKTFE 241 (503)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEE--EEEECSS--------CTHH--HHHHHHHHHHTTCCCCEEEEEEECBCSCSEECSS
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE--eeeccCC--------chHH--HHHHHHHHHhCCCCCCEEEEeecCCCcccccccc
Confidence 78888999999999999998873 2221100 0001 1122221 12236999999999876530000
Q ss_pred --hh--HhHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccceee
Q 013811 291 --DR--DQLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLF 362 (436)
Q Consensus 291 --~~--~~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~ 362 (436)
.. .....+.+-+..+.+...+ ..++||+|+|||.+..... .++..++.|+-..+ .... ..+.+..+
T Consensus 242 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l---~~~~---~~v~~~~~ 315 (503)
T 1w91_A 242 YYYQELEPPEDMLEQFKTVRALIRQSPFPHLPLHITEYNTSYSPINPVHDTALNAAYIARIL---SEGG---DYVDSFSY 315 (503)
T ss_dssp CEECCBCCHHHHHHHHHHHHHHHHTSSSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHH---HHGG---GTCSEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHH---HHHh---hhhheEEE
Confidence 00 0011122222222222222 1379999999999764211 12233455543333 2221 13567899
Q ss_pred cccccC
Q 013811 363 WQLLTE 368 (436)
Q Consensus 363 W~~~~~ 368 (436)
|++.|.
T Consensus 316 w~~~D~ 321 (503)
T 1w91_A 316 WTFSDV 321 (503)
T ss_dssp SCSBSC
T ss_pred EEEecc
Confidence 999874
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-16 Score=151.40 Aligned_cols=286 Identities=10% Similarity=0.063 Sum_probs=162.4
Q ss_pred EEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC--CCCC-hhhhhhHHHHHHHHHH
Q 013811 46 LYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP--GSYN-EQMFKGLDFVIAEARK 122 (436)
Q Consensus 46 p~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p--g~~~-~~~l~~lD~~i~~a~~ 122 (436)
..+++|+++.... .....+.+..+..|+.|+++|+|+||+-+..+... +.... ..++ ....+.+..+++.|++
T Consensus 33 ~~~i~Gis~~~~~--~~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~--~~~~~~~~~~~~t~~~~~v~~~~~~Ak~ 108 (343)
T 3civ_A 33 LGFIRGMTFGFVG--QHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEH--PGDPAIAYGPPVTVSDDEIASMAELAHA 108 (343)
T ss_dssp SCCEEEEEESTTC--BTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESS--TTCCCCBCSTTTBCCHHHHHHHHHHHHH
T ss_pred ccceeeEEecccc--CCCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCC--CCCCcccccCCCCCCHHHHHHHHHHHHH
Confidence 3578999974322 11222334567999999999999999943321110 11000 0111 1136788899999999
Q ss_pred cCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHH---HHHHHHHHHHHhccccccccccCCCCcEEEE
Q 013811 123 YGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVK---GYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199 (436)
Q Consensus 123 ~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~---~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~w 199 (436)
+||+|+|.+|-. ..-| .|...- ...+. +-..+++.. ..|++++..++. .+++..|.+|
T Consensus 109 ~GL~V~l~p~i~-~~~g------~w~g~i--~~~~~-~~~~~~~w~~~f~~y~~~i~~~a~---------~a~~~~V~~~ 169 (343)
T 3civ_A 109 LGLKVCLKPTVN-CRDG------TWRGEI--RFEKE-HGPDLESWEAWFGSYSDMMAHYAH---------VAKRTGCEMF 169 (343)
T ss_dssp TTCEEEEEEEEE-ETTC------CCGGGC--CCSBS-CCTTSSBHHHHHHHHHHHHHHHHH---------HHHHTTCSEE
T ss_pred CCCEEEEEEEee-ccCC------cccccc--cccCc-CCcchHHHHHHHHHHHHHHHHHHH---------HccCCCceEE
Confidence 999999987632 1101 121100 00000 001122222 333344333321 1333457899
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEee
Q 013811 200 ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVH 279 (436)
Q Consensus 200 eL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H 279 (436)
.++||+..... ....++++++.+|++||. +||..... +.. . + .. ..+.+||+++|
T Consensus 170 ~IGNE~~~~~~-----~~~~~~~Li~~vR~~~~g-~VTya~~~-~~~-~------~------~~-----lw~~~DvIgin 224 (343)
T 3civ_A 170 CVGCEMTTAEP-----HEAMWRETIARVRTEYDG-LVTYNCNH-GRE-E------H------VR-----FWDAVDLISSS 224 (343)
T ss_dssp EEEESCTTTTT-----CHHHHHHHHHHHHHHCCS-EEEEEEET-TCT-T------T------CS-----CGGGSSEEEEE
T ss_pred EECCCCCCCCc-----hHHHHHHHHHHHHhhCCC-CEEEEecC-ccc-c------c------cc-----ccccCCEEEEe
Confidence 99999988632 244557789999999997 88875421 110 0 0 01 12579999999
Q ss_pred cCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC------------CCChHHHHHHHHHHHHHH
Q 013811 280 SYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP------------GYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 280 ~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~------------g~~~~~r~~~~~~~~~~i 347 (436)
.|+. |.. .... .+.++...+..+|||+|+|||+++... ..+++.|.++|+.+++.+
T Consensus 225 ~Y~~-~~~-------w~~~----~~~l~~~~~~~~KPIiitE~G~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~~~ 292 (343)
T 3civ_A 225 AYYP-IDR-------WRDR----VPVLREVAEAHEKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAAM 292 (343)
T ss_dssp CCCC-GGG-------HHHH----HHHHHHHHHHHTCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHHS
T ss_pred ccCC-chh-------HHHH----HHHHHHHHHHhCCCEEEEeeCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHH
Confidence 9976 310 1111 122222222379999999999986431 146778888888776543
Q ss_pred HHHhhcCCCccceeecccccCCCCC---C-CCCceEEeCCCcCHHHHHHHHHHHH
Q 013811 348 YSSAKRGGAAAGGLFWQLLTEGMDA---F-RDGYEIVLSQSPSTANVITQQAHKL 398 (436)
Q Consensus 348 ~~~~~~~~~~~G~~~W~~~~~g~~~---~-~dg~~i~~~~d~~~~~li~~~~~~~ 398 (436)
.+.+.+.|.++|.|.+..... . ..+|+ ...+++..+|++.-.++
T Consensus 293 ----~~~~~~~G~~vW~w~~~~~~r~~~~~~~~ft---~~~KpA~~vlr~~y~~~ 340 (343)
T 3civ_A 293 ----PDEPWFKGYMLWEWPWKLYPREAASEDGSYC---IYGKPAEDVVARAFSAI 340 (343)
T ss_dssp ----CCCTTEEEEEEEEECSSCCCGGGGGGCCSSC---CTTSHHHHHHHHHHHHH
T ss_pred ----hcCCCccEEEEEEECCCCccccCcccCCCcC---CCCChHHHHHHHHHHHh
Confidence 223357899999998842111 1 12455 22466888888776554
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.8e-16 Score=151.12 Aligned_cols=238 Identities=16% Similarity=0.236 Sum_probs=157.1
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
.++..+.+.++|.+++= .+..|..+||++|.|+ +..+|.+++.|+++||+|.....- |.. +.|.|...
T Consensus 27 ~~~~~~~~~~fn~~t~e--n~~kW~~~ep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~lv-W~~-----~~P~W~~~- 94 (302)
T 1nq6_A 27 AAYASTLDAQFGSVTPE--NEMKWDAVESSRNSFS---FSAADRIVSHAQSKGMKVRGHTLV-WHS-----QLPGWVSP- 94 (302)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE-EST-----TCCTTTTT-
T ss_pred HHHHHHHHhcCCeEEEc--CceeeccccCCCCcCC---cHHHHHHHHHHHHCCCEEEEEecc-cCC-----CCChhhhc-
Confidence 45667777899999971 1234778899999999 788999999999999998633210 221 34666521
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---ChHHH-----HHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SGRTI-----QAWITEM 223 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~~~~-----~~w~~~~ 223 (436)
++++..++.++++++.+++| |++ .|.+|++.|||...... ....+ ..|++.+
T Consensus 95 ----------~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~a 154 (302)
T 1nq6_A 95 ----------LAATDLRSAMNNHITQVMTH--------YKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEA 154 (302)
T ss_dssp ----------SCHHHHHHHHHHHHHHHHHH--------TTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHH--------cCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHH
Confidence 46688899999999999999 997 68899999999875310 00011 3478899
Q ss_pred HHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCccc-chhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHhHHHH
Q 013811 224 ASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIG-TDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQLSFL 298 (436)
Q Consensus 224 ~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g-~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~ 298 (436)
.+++|+.||+..+.+.. |+...+ +.-..+ .+++... ....+|.+++ |.+... +. .+
T Consensus 155 f~~Ar~~dP~a~L~~Nd---y~~~~~------~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~--~~--~~------ 215 (302)
T 1nq6_A 155 FRTARTVDADAKLCYND---YNTDGQ------NAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNS--PV--PS------ 215 (302)
T ss_dssp HHHHHHHCTTSEEEEEE---SSCSSS------SHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB--CC--CT------
T ss_pred HHHHHHhCCCCEEEecc---cccccC------chHHHHHHHHHHHHHHCCCCcceEEEEEeecCCC--CC--HH------
Confidence 99999999998776642 221110 000000 0122111 1224899999 655321 11 01
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCC
Q 013811 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFR 374 (436)
Q Consensus 299 ~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~ 374 (436)
.+.+.++...+ +++||+|+|+|+.. +++.|.++|+.++..+.+ ...+.|.++|.+.|.. +|.
T Consensus 216 --~~~~~l~~~a~-~g~pi~iTE~di~~-----~~~~qa~~~~~~~~~~~~----~~~v~git~Wg~~D~~--sW~ 277 (302)
T 1nq6_A 216 --DFQANLQRFAD-LGVDVQITELDIEG-----SGSAQAANYTKVVNACLA----VTRCTGITVWGVTDKY--SWR 277 (302)
T ss_dssp --THHHHHHHHHT-TTCEEEEEEEEECC-----CHHHHHHHHHHHHHHHHT----STTEEEEEESCSCGGG--CTT
T ss_pred --HHHHHHHHHHh-cCCcEEEeeCCCCC-----chHHHHHHHHHHHHHHHh----CCCceEEEEEcCCCCC--CcC
Confidence 12333333334 89999999999974 356788888888765544 3468899999999963 464
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.3e-16 Score=153.11 Aligned_cols=241 Identities=14% Similarity=0.179 Sum_probs=158.6
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
.++..+.+.++|.+++= .+-.|..+||++|.|+ +..+|++++.|+++||+|..... .|.. +.|.|...
T Consensus 27 ~~~~~~~~~~fn~~t~e--n~~kW~~~ep~~g~~~---~~~~D~~~~~a~~~gi~v~ghtl-~W~~-----~~P~W~~~- 94 (315)
T 3cui_A 27 AQYKAIADSEFNLVVAE--NAMKWDATEPSQNSFS---FGAGDRVASYAADTGKELYGHTL-VWHS-----QLPDWAKN- 94 (315)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEE-EESS-----SCCHHHHT-
T ss_pred HHHHHHHHhcCCEEEEC--CcccHHHhCCCCCcCC---hHHHHHHHHHHHHCCCEEEEEee-ecCC-----CCCHHHhc-
Confidence 56777778899999981 1234777899999999 88999999999999999865321 1322 34678742
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC-CC-ChHHH-----HHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS-DP-SGRTI-----QAWITEMA 224 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~-~~-~~~~~-----~~w~~~~~ 224 (436)
++.+..++.++++++.+++| |++. |.+|++.|||.... .. ....+ ..|++.+.
T Consensus 95 ----------~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af 154 (315)
T 3cui_A 95 ----------LNGSAFESAMVNHVTKVADH--------FEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAF 154 (315)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHH--------cCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHHH
Confidence 35678899999999999999 9985 88999999998753 10 00011 46888999
Q ss_pred HHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHH
Q 013811 225 SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWL 302 (436)
Q Consensus 225 ~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i 302 (436)
+++|+.||+..|.+.. |+...+ +..-..-.+++... ..-.+|.++++.+........ .+
T Consensus 155 ~~Ar~~dP~a~l~~nd---y~~~~~-----~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~-----------~~ 215 (315)
T 3cui_A 155 RAARAADPTAKLCIND---YNVEGI-----NAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQVPG-----------DF 215 (315)
T ss_dssp HHHHHHCSSSEEEEEE---SSCSSS-----SHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTCCCT-----------TH
T ss_pred HHHHhhCCCCEEEECC---ccccCc-----chHHHHHHHHHHHHHHCCCcccEEEeeeecCCCCCHH-----------HH
Confidence 9999999999887642 221110 00000001111111 112489988865532111111 13
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 303 DTHIQDAEHILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 303 ~~~~~~a~~~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+.++.... +++||+|+|+|+....++ .+++.+.++|+.++..+.+. ..+.|.++|.+.|.
T Consensus 216 ~~~l~~~a~-~g~pv~iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~----~~v~git~Wg~~D~ 278 (315)
T 3cui_A 216 RQNLQRFAD-LGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQV----TRCQGVTVWGITDK 278 (315)
T ss_dssp HHHHHHHHT-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTS----TTEEEEEESCSBTT
T ss_pred HHHHHHHHh-cCCceEEEecccccCCCCChHHHHHHHHHHHHHHHHHHhC----CCceEEEEEeCCCC
Confidence 333444444 899999999998743222 23456778888877765442 46789999999986
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-16 Score=161.37 Aligned_cols=277 Identities=15% Similarity=0.157 Sum_probs=151.8
Q ss_pred hhhHHHHHHHHH-HCCCCEEEEccc-cCCCCC-CCcc--CCC--CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCC
Q 013811 67 RSKVSTAFHEAA-SHGLTVARTWAF-SDGGYR-PLQR--SPG--SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139 (436)
Q Consensus 67 ~~~~~~~l~~l~-~~G~N~vRi~~~-~d~~~~-~lq~--~pg--~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~g 139 (436)
+++++++|+.|+ ++|+|++|++.. +++-.. ...+ .+| .|+ +..+|.+++.|+++||+++++|...
T Consensus 32 ~~~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~~---~~~~D~~~~~~~~~Gi~p~v~l~~~----- 103 (500)
T 1uhv_A 32 QKEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYN---FTYIDRIFDSFLEIGIRPFVEIGFM----- 103 (500)
T ss_dssp BHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEEC---CHHHHHHHHHHHHHTCEECEEECCC-----
T ss_pred CHHHHHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEEe---hhHHHHHHHHHHHCCCEEEEEEccC-----
Confidence 478999999998 999999999652 221000 0111 234 444 7899999999999999999999642
Q ss_pred ChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHH----hccccccccccCCCCcEE--EEEeecCCCCCCC---
Q 013811 140 GKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVL----NRYNTFTGIHYKDDPTIM--AWELMNEPRCTSD--- 210 (436)
Q Consensus 140 g~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv----~r~n~~tg~~yk~~p~I~--~weL~NEp~~~~~--- 210 (436)
|.|..........-..-+++|+....|.++++.++ +| |++. .|. .|+++|||+....
T Consensus 104 -----P~~~~~~~~~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~r--------yg~~-~V~~W~~~~~NEpn~~~~~~~ 169 (500)
T 1uhv_A 104 -----PKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISR--------YGIE-EVLKWPFEIWNEPNLKEFWKD 169 (500)
T ss_dssp -----CTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHH--------HCHH-HHTTCCEEESSCTTSTTTSGG
T ss_pred -----hHHHhCCCCceeecCCCCCCCcCHHHHHHHHHHHHHHHHHh--------cCcc-ceeeeeEEEeeCCCCcccCCC
Confidence 22221100000000011234443444555555544 55 5542 254 5799999997421
Q ss_pred CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCC
Q 013811 211 PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSS 288 (436)
Q Consensus 211 ~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~ 288 (436)
.+.+.+.+++.+++++||+.||+..|. +.+.-+. ...| -..|... .....+||+++|.|+......
T Consensus 170 ~~~~~y~~~~~~~~~~ik~~~P~~~vg--gp~~~~~--------~~~w--~~~~l~~~~~~~~~~D~is~H~Y~~~~~~~ 237 (500)
T 1uhv_A 170 ADEKEYFKLYKVTAKAIKEVNENLKVG--GPAICGG--------ADYW--IEDFLNFCYEENVPVDFVSRHAYTSKQGEY 237 (500)
T ss_dssp GCHHHHHHHHHHHHHHHHHHCTTSCEE--EEEECTT--------CTHH--HHHHHHHHHHHTCCCSEEEEEEECBCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEE--CcccCCC--------chHH--HHHHHHHHHhCCCCCcEEEEeecCCCcccc
Confidence 145668888999999999999998773 2221000 0001 1122211 112469999999998654211
Q ss_pred CC---hh--HhHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013811 289 SN---DR--DQLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAG 359 (436)
Q Consensus 289 ~~---~~--~~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G 359 (436)
.. .. .....+.+-+....+...+ ..++||+|+|||.+..... .++..+..|+...+. ... ..+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~---~~~---~~v~~ 311 (500)
T 1uhv_A 238 TPHLIYQEIMPSEYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILS---EGG---DYVDS 311 (500)
T ss_dssp CSSCCCCCBCCHHHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHH---HGG---GTCSE
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHH---HHH---hhhhh
Confidence 00 00 0111222222222222222 1479999999999864321 123345555443332 221 13567
Q ss_pred eeecccccCCCC------CCCCCceEEeCC
Q 013811 360 GLFWQLLTEGMD------AFRDGYEIVLSQ 383 (436)
Q Consensus 360 ~~~W~~~~~g~~------~~~dg~~i~~~~ 383 (436)
..+|++.|.... .+..+|+++..+
T Consensus 312 ~~~W~l~D~~e~~~~~~~~~~~~fGL~~~d 341 (500)
T 1uhv_A 312 FSYWTFSDVFEERDVPRSQFHGGFGLVALN 341 (500)
T ss_dssp EEESCSBSCCCTTSSCCSSCSCCSCSEETT
T ss_pred eeeeEEechhhccCCCCccccCCcccCCCC
Confidence 899999874211 122367877653
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=9.2e-16 Score=151.75 Aligned_cols=244 Identities=16% Similarity=0.200 Sum_probs=160.3
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
.+...|.+.++|.+++= .+..|..++|++|.|+ +..+|++++.|+++||+|+....- |.. +.|.|....
T Consensus 53 ~~~~~~~~~~fn~vt~e--n~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv-W~~-----q~P~W~~~~ 121 (347)
T 1xyz_A 53 PTYNSILQREFSMVVCE--NEMKFDALQPRQNVFD---FSKGDQLLAFAERNGMQMRGHTLI-WHN-----QNPSWLTNG 121 (347)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTS
T ss_pred HHHHHHHHhcCCEEEEC--CcccHHHhcCCCCcCC---hHHHHHHHHHHHHCCCEEEEEeee-ccc-----cCcHHHhcC
Confidence 56777778899999981 1224667899999999 788999999999999998643211 322 357887531
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----Ch--HHH-HHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SG--RTI-QAWITEMA 224 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~--~~~-~~w~~~~~ 224 (436)
-++.+..++.++++++.+++| |+++ |.+|++.|||...... +. ..+ ..+++.+.
T Consensus 122 ---------~~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af 182 (347)
T 1xyz_A 122 ---------NWNRDSLLAVMKNHITTVMTH--------YKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAF 182 (347)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHH
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHH--------hCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHHHH
Confidence 246678999999999999999 9986 8899999999874211 10 111 36788999
Q ss_pred HHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHhHHHHHH
Q 013811 225 SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQLSFLNN 300 (436)
Q Consensus 225 ~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~ 300 (436)
+++|+.||+..+.++. |+...+ ++--..-.+++... ..-.||.+++ |.... + +.+ .+ .
T Consensus 183 ~~Ar~~dP~a~L~~Nd---yn~~~~-----~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~-~----~~~-~~----~ 244 (347)
T 1xyz_A 183 RYAREADPDALLFYND---YNIEDL-----GPKSNAVFNMIKSMKERGVPIDGVGFQCHFING-M----SPE-YL----A 244 (347)
T ss_dssp HHHHHHCTTSEEEEEE---SSCSSS-----SHHHHHHHHHHHHHHHTTCCCCEEEECCEEESS-C----CHH-HH----H
T ss_pred HHHHhhCCCCEEEecc---Cccccc-----cchHHHHHHHHHHHHHCCCCcceEEEeeecCCC-C----Cch-hH----H
Confidence 9999999998887653 222110 00000001122111 1224899888 54322 1 111 00 1
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCCCCCC---hHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKDPGYS---TYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
-+.+.++...+ +++||+|+|+++....+..+ ++.+.++|+.++..+.+. ..+.|.++|.+.|.
T Consensus 245 ~~~~~l~~~a~-~G~pi~iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~----~~v~git~Wg~~D~ 310 (347)
T 1xyz_A 245 SIDQNIKRYAE-IGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLAN----PNCNTFVMWGFTDK 310 (347)
T ss_dssp HHHHHHHHHHH-TTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHC----TTEEEEEESCSBTT
T ss_pred HHHHHHHHHHh-cCCceEEEeccccCCCCCCchhHHHHHHHHHHHHHHHHHhc----CCeeEEEEecCccC
Confidence 23444444444 89999999999976433221 356778888887766553 36789999999986
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-15 Score=152.72 Aligned_cols=270 Identities=16% Similarity=0.176 Sum_probs=154.5
Q ss_pred hhhHHHHHHHH-HHCCCCEEEEcc-ccCC-CCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEA-ASHGLTVARTWA-FSDG-GYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l-~~~G~N~vRi~~-~~d~-~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
++++++.|..+ +++|+..||+|. |+|. .+...++....|| |..+|.+++.+.++||++++.|...
T Consensus 40 ~~d~~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y~---~~~~D~~~d~~~~~G~~p~~~l~~~--------- 107 (500)
T 4ekj_A 40 REDSQAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVYD---WTKIDQLYDALLAKGIKPFIELGFT--------- 107 (500)
T ss_dssp SHHHHHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEEC---CHHHHHHHHHHHHTTCEEEEEECCB---------
T ss_pred ChHHHHHHHHHHHhcCceEEEECCccccccceeecCCCCeecc---hHHHHHHHHHHHHCCCEEEEEEeCC---------
Confidence 35667677666 579999999965 4332 1222222223466 8899999999999999999998532
Q ss_pred hhhHHhhcCCCCCCCCCCCC--C-hHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC---CChHHH
Q 013811 144 YVNWARSQGQFLTSDDDFFR--N-PVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD---PSGRTI 216 (436)
Q Consensus 144 y~~W~~~~G~~~~~~~~f~~--~-~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~---~~~~~~ 216 (436)
+.|+...+..........+ + ....+.+.++++++++| |+.+ ..+..||++|||+.... .+.+.+
T Consensus 108 -P~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~R--------Yg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y 178 (500)
T 4ekj_A 108 -PEAMKTSDQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRAR--------YGVEEVRTWFFEVWNEPNLDGFWEKADQAAY 178 (500)
T ss_dssp -CGGGCSSCCEETTTTEECSCCCHHHHHHHHHHHHHHHHHH--------HCHHHHHTSEEEESSCTTSTTTSGGGCHHHH
T ss_pred -chhhcCCCCccccccCCCCcccHHHHHHHHHHHHHHHHHh--------hCccccceeEEEEEECCCCccCCCCCCHHHH
Confidence 2232211110000000111 1 22345556778888888 8654 34667999999987532 246788
Q ss_pred HHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCC---C---
Q 013811 217 QAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLS---S--- 288 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~---~--- 288 (436)
.++++.++++||+.||+..|..++ .-+. .+ ..+|... .....+||+++|.|+..... .
T Consensus 179 ~~l~~~~~~aik~~~P~~~Vgg~~--~~~~----------~~--~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~ 244 (500)
T 4ekj_A 179 FELYDVTARAIKAIDPSLRVGGPA--TAGA----------AW--VPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQ 244 (500)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEE--EGGG----------CS--HHHHHHHHHHTTCCCSEEEEEEESEEEEEECTTSCE
T ss_pred HHHHHHHHHHHHhhCCccccccCc--cCCc----------cc--cHHHHHHHHhcCCccceEEeeccCCCCCCccccccc
Confidence 999999999999999998875322 1000 01 1122221 22346999999999632110 0
Q ss_pred --------CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC--CCChHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013811 289 --------SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP--GYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358 (436)
Q Consensus 289 --------~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~--g~~~~~r~~~~~~~~~~i~~~~~~~~~~~ 358 (436)
......+..+ ++.++... ..++||+++|||...... ..+...++.|+...+. .. .....
T Consensus 245 ~~~~~~~~~~~~~~~~~~----r~~l~~~~-~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~---~~---~~~~~ 313 (500)
T 4ekj_A 245 DTKLSPSPDAVVGDVRRV----REQIEASA-FPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLR---RV---KGLVQ 313 (500)
T ss_dssp EEEECCSTTTTHHHHHHH----HHHHHTTT-STTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHH---HH---TTTCS
T ss_pred ccccccCHHHHHHHHHHH----HHHHHHhC-CCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHH---Hh---hhhCc
Confidence 0011112222 22222211 147999999999876532 2234455555443332 22 12456
Q ss_pred ceeecccccCCC------CCCCCCceEEeC
Q 013811 359 GGLFWQLLTEGM------DAFRDGYEIVLS 382 (436)
Q Consensus 359 G~~~W~~~~~g~------~~~~dg~~i~~~ 382 (436)
+..+|++.|... ..+..+|++...
T Consensus 314 ~~~~w~~~d~~~~~~~~~~~~~~~fGll~~ 343 (500)
T 4ekj_A 314 AMSYWTYSDLFEEPGPPTAPFQGGFGLMNP 343 (500)
T ss_dssp EEEESCSBSCCCTTSSCCSSCSSCSCSBCT
T ss_pred eeeEEEEEeeecccCCCcccccCCCCcccc
Confidence 788999887321 123356777664
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=157.07 Aligned_cols=183 Identities=13% Similarity=0.139 Sum_probs=134.4
Q ss_pred CCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhh
Q 013811 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQM 109 (436)
Q Consensus 30 ~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~ 109 (436)
..-|+.++..|++||||+++.|..+|+.... .++.++++|+.||++|+|+|+++++ |+..||.||+||-+.
T Consensus 23 ~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p-----~pe~W~d~l~kmKa~GlNtV~tYV~----Wn~hEP~eG~fdFsg 93 (1003)
T 3og2_A 23 QNIVTWDEHSLFVHGERVVIFSGEVHPFRLP-----VPSLYLDVFHKIKALGFNTVSFYVD----WALLEGKPGRFRADG 93 (1003)
T ss_dssp SSSEEECSSCEEETTEEECEEEEEECGGGCC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCCCG
T ss_pred cceEEEcCCeEEECCEEEEEEEEEECCccCC-----CHHHHHHHHHHHHHcCCCEEEEecc----hhhcCCCCCEecccc
Confidence 3459999999999999999999998766431 1378999999999999999999876 777899999999666
Q ss_pred hhhHHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTF 185 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~ 185 (436)
...||++|+.|+++||+|||..- ..|. +||. |.|...... .---+||..+++.++++++|++++-++
T Consensus 94 ~~dL~~fl~la~e~GL~VILRpGPYi~aEw~-~GG~---P~WL~~~~~-----~lRt~~p~yl~~~~~~~~~l~~~~~~~ 164 (1003)
T 3og2_A 94 IFSLEPFFEAATKAGIYLLARPGPYINAEVS-GGGF---PGWLQRVKG-----KLRTDAPDYLHATDNYVAHIASIIAKA 164 (1003)
T ss_dssp GGCSHHHHHHHHHHTCEEEEEEESCCCTTBG-GGGC---CGGGGGCCS-----CTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHcCCEEEecCCcceeeecC-CCCc---cchhccCCC-----eecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 66799999999999999999742 2332 4664 567654211 112368899999999999999883222
Q ss_pred cccccCCCCcEEEEEeecCCCCCCCC---ChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 186 TGIHYKDDPTIMAWELMNEPRCTSDP---SGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 186 tg~~yk~~p~I~~weL~NEp~~~~~~---~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
.+.+.+.|++|++.||.....+. ....+.+|+++|+ |+..-..++
T Consensus 165 ---~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~---~~~Gi~VPl 212 (1003)
T 3og2_A 165 ---QITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQA---RNAGIIVPL 212 (1003)
T ss_dssp ---BGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHH---HHTTCCSCB
T ss_pred ---hccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHH---HHcCCceEE
Confidence 24566789999999999875421 1334555555554 444444443
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=149.87 Aligned_cols=171 Identities=13% Similarity=0.188 Sum_probs=130.6
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+.++..|++||||+.+.|..+|+... .++.++++|+.||++|+|+||+.++ |+..+|.||+||-+....
T Consensus 11 v~~d~~~f~ldGkp~~i~sG~~Hy~r~------p~~~W~d~l~kmKa~G~NtV~~yv~----W~~hEP~~G~fdF~g~~D 80 (654)
T 3thd_A 11 IDYSRDSFLKDGQPFRYISGSIHYSRV------PRFYWKDRLLKMKMAGLNAIQTYVP----WNFHEPWPGQYQFSEDHD 80 (654)
T ss_dssp EETTTTEEEETTEEECCEEEECCGGGS------CGGGHHHHHHHHHHTTCSEEEEECC----HHHHCSBTTBCCCSGGGC
T ss_pred EEEcCCEEEECCEEEEEEEEecccccC------CHHHHHHHHHHHHHcCCCEEEEEec----hhhcCCCCCccCccchHH
Confidence 555799999999999999999876543 1478999999999999999999554 777899999999666666
Q ss_pred HHHHHHHHHHcCCEEEEecc----cCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 113 LDFVIAEARKYGIKLILSLA----NNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
||.+|+.|+++||+||+..- ..|. +||. |.|...... + .---+||..+++.+++++.|++++-+ .
T Consensus 81 L~~fl~~a~~~GL~ViLr~GPyi~aEw~-~GG~---P~WL~~~p~-i---~~Rt~~p~y~~~~~~~~~~l~~~l~~---~ 149 (654)
T 3thd_A 81 VEYFLRLAHELGLLVILRPGPYICAEWE-MGGL---PAWLLEKES-I---LLRSSDPDYLAAVDKWLGVLLPKMKP---L 149 (654)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCCCTTBG-GGGC---CGGGGGSTT-C---CSSSCCHHHHHHHHHHHHHHHHHHGG---G
T ss_pred HHHHHHHHHHcCCEEEeccCCccccccC-CCcC---ChHHhcCCC-c---eEecCCHHHHHHHHHHHHHHHHHhhh---h
Confidence 99999999999999999862 2232 3554 677654210 0 11125789999999999999998654 3
Q ss_pred ccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHH
Q 013811 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAS 225 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~ 225 (436)
.|++++.|++|++.||...... ....+.+|+++++.
T Consensus 150 ~~~~ggpVI~~QvENEyG~y~~-~d~~Ym~~l~~~~~ 185 (654)
T 3thd_A 150 LYQNGGPVITVQVENEYGSYFA-CDFDYLRFLQKRFR 185 (654)
T ss_dssp BGGGTSSEEEEECSSCGGGSSC-CCHHHHHHHHHHHH
T ss_pred hccCCCCEEEEEeccccccccc-ccHHHHHHHHHHHH
Confidence 4889999999999999975432 23456666666643
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=159.47 Aligned_cols=160 Identities=11% Similarity=0.073 Sum_probs=114.7
Q ss_pred CCCC--EEe-----eCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC
Q 013811 29 GDGF--IRT-----RGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS 101 (436)
Q Consensus 29 ~~~f--v~v-----~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~ 101 (436)
..|| |++ .+..|.+||||++++|+|++ .... . ..+.+.++++|+.||++|+|+||+... +
T Consensus 331 ~~GfR~i~~~~~~~~~~~f~lNG~pi~l~G~n~~-pd~~-~-~~~~e~~~~dl~~~k~~g~N~iR~~h~-----~----- 397 (1032)
T 2vzs_A 331 KFGVRDVKATLNSSGGRQYSVNGKPLLIRGGGYT-PDLF-L-RWNETAAADKLKYVLNLGLNTVRLEGH-----I----- 397 (1032)
T ss_dssp EECCCCEEEEECTTSCEEEEETTEEECEEEEECC-CCTT-C-CCCHHHHHHHHHHHHHTTCCEEEEESC-----C-----
T ss_pred eeeeEEEEEEEccCCCceEEECCEEEEEeccccC-cccc-c-cCCHHHHHHHHHHHHHcCCCEEECCCC-----C-----
Confidence 3455 666 46789999999999999973 3221 1 235689999999999999999999322 1
Q ss_pred CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 102 PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 102 pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
.+ ++++++|.++||+|+-++..+ +. +..|. +.. .....| .|...+.+.+.++++|+|
T Consensus 398 ---~~-------~~fydlcDelGilVw~e~~~~-----~~--w~~~~---~~~-~~~~~~--~~~~~~~~~~~~~~~V~R 454 (1032)
T 2vzs_A 398 ---EP-------DEFFDIADDLGVLTMPGWECC-----DK--WEGQV---NGE-EKGEPW--VESDYPIAKASMFSEAER 454 (1032)
T ss_dssp ---CC-------HHHHHHHHHHTCEEEEECCSS-----SG--GGTTT---STT-SSSCCC--CTTHHHHHHHHHHHHHHH
T ss_pred ---Cc-------HHHHHHHHHCCCEEEEccccc-----cc--ccccC---CCC-Cccccc--ChhHHHHHHHHHHHHHHH
Confidence 11 478899999999999987432 10 00010 000 001122 244566788889999999
Q ss_pred cccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCC
Q 013811 182 YNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 182 ~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
++|||+|++|.+.||+... ..+.+.+.+.+|++||+++|+.++
T Consensus 455 --------~rNHPSIi~Ws~gNE~~~~--------~~~~~~~~~~~k~~DptRpv~~~s 497 (1032)
T 2vzs_A 455 --------LRDHPSVISFHIGSDFAPD--------RRIEQGYLDAMKAADFLLPVIPAA 497 (1032)
T ss_dssp --------HTTCTTBCCEESCSSSCCC--------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred --------hcCCCeEEEEEeccCCCch--------HHHHHHHHHHHHHhCCCCeEEecC
Confidence 9999999999999999653 234567889999999999998765
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-14 Score=137.71 Aligned_cols=232 Identities=16% Similarity=0.179 Sum_probs=149.8
Q ss_pred HHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCC
Q 013811 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQ 153 (436)
Q Consensus 74 l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~ 153 (436)
.+.+ +.++|.+++= .+-.|..++|++|.|+ |..+|.+++.|+++||+|..... .|.. +.|.|....
T Consensus 33 ~~~~-~~~fn~vt~e--n~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtl-~W~~-----q~P~W~~~~-- 98 (303)
T 1i1w_A 33 AAII-QANFGQVTPE--NSMKWDATEPSQGNFN---FAGADYLVNWAQQNGKLIRGHTL-VWHS-----QLPSWVSSI-- 98 (303)
T ss_dssp HHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEE-ECST-----TCCHHHHTC--
T ss_pred HHHH-HhhCCEEEEC--ccccHHHhCCCCCccC---hhhHHHHHHHHHHCCCEEEEeec-cccC-----CCChHHhcC--
Confidence 3344 6699999971 1224677899999999 88899999999999999865432 1432 457887531
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--HH-HHHHHHHHHHHh
Q 013811 154 FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--RT-IQAWITEMASYV 227 (436)
Q Consensus 154 ~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~~-~~~w~~~~~~~I 227 (436)
.+.+.+++..+++++.+++| |+++ |.+|++.|||...... +. +. -..|++.+.+++
T Consensus 99 --------~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~A 160 (303)
T 1i1w_A 99 --------TDKNTLTNVMKNHITTLMTR--------YKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTA 160 (303)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHHHHHh--------cCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHH
Confidence 12245789999999999999 9985 8899999999653210 10 00 135788999999
Q ss_pred hccCCCCEEEeCCCcccCCCCCccccCCCCC-c--ccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHH
Q 013811 228 KSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL-D--IGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWL 302 (436)
Q Consensus 228 r~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~-~--~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i 302 (436)
|+.||+..+.++. |+... |.+ . .-..++... ..-.+|.++++.+.... . + ..+
T Consensus 161 r~~dP~a~L~~Nd---yn~~~-------~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~----~-~-------~~~ 218 (303)
T 1i1w_A 161 RAADPNAKLYIND---YNLDS-------ASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAG----Q-G-------ASV 218 (303)
T ss_dssp HHHCTTSEEEEEE---SSCCC-------SSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT----T-H-------HHH
T ss_pred HHHCCCCeEEecc---ccccC-------CChHHHHHHHHHHHHHHHCCCcccEEEeccccCCC----C-H-------HHH
Confidence 9999999988653 22211 110 0 001122211 12248988884432110 0 1 223
Q ss_pred HHHHHHHHHhcCC-cEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCC
Q 013811 303 DTHIQDAEHILRK-PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFR 374 (436)
Q Consensus 303 ~~~~~~a~~~~~k-Pv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~ 374 (436)
.+.++...+ +++ ||+|+|+++... +.++|+.++..+.+. +.+.|.++|.+.|.. .|.
T Consensus 219 ~~~l~~~a~-~G~~pi~iTEldi~~~--------qa~~y~~~~~~~~~~----~~v~git~Wg~~D~~--sW~ 276 (303)
T 1i1w_A 219 LQALPLLAS-AGTPEVAITELDVAGA--------SSTDYVNVVNACLNV----SSCVGITVWGVADPD--SWR 276 (303)
T ss_dssp HHHHHHHHT-TCCSEEEEEEEEETTC--------CHHHHHHHHHHHHHC----TTEEEEEESCSBGGG--STT
T ss_pred HHHHHHHHH-CCCCeEEEEeCCccch--------HHHHHHHHHHHHHhC----CCceEEEEEcCCCCC--CcC
Confidence 444444444 798 999999999732 345566676655443 467899999999863 464
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.3e-14 Score=138.88 Aligned_cols=248 Identities=15% Similarity=0.180 Sum_probs=158.5
Q ss_pred HHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEe-cccCCCCCCChhhhhhHH
Q 013811 70 VSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS-LANNYDSFGGKKQYVNWA 148 (436)
Q Consensus 70 ~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~-l~~~w~~~gg~~~y~~W~ 148 (436)
+..+.+.+ +.++|.+++= .+..|..+||.+|.|+ |..+|++++.|+++||+|... |. |.. +.|.|.
T Consensus 27 ~~~~~~~~-~~~fn~vt~e--N~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv--W~~-----q~P~W~ 93 (331)
T 1n82_A 27 IEMQKQLL-IDHVNSITAE--NHMKFEHLQPEEGKFT---FQEADRIVDFACSHRMAVRGHTLV--WHN-----QTPDWV 93 (331)
T ss_dssp HHHTHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE--ESS-----SCCGGG
T ss_pred CHHHHHHH-HhcCCEEEEC--CcccHHHhCCCCCccC---hHHHHHHHHHHHHCCCEEEEEeee--cCC-----CCChhh
Confidence 34455666 5699999981 1234778899999999 889999999999999998653 22 322 357787
Q ss_pred hhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----Ch--HH-HHHHH
Q 013811 149 RSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----SG--RT-IQAWI 220 (436)
Q Consensus 149 ~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----~~--~~-~~~w~ 220 (436)
.... ....++.+..++..+++++.+++| |++ .|.+|++.|||...... +. +. -..|+
T Consensus 94 ~~~~-----~g~~~~~~~~~~~~~~~i~~v~~r--------Y~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i 158 (331)
T 1n82_A 94 FQDG-----QGHFVSRDVLLERMKCHISTVVRR--------YKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFM 158 (331)
T ss_dssp GBCS-----SSSBCCHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHH
T ss_pred ccCC-----CCCCCCHHHHHHHHHHHHHHHHHH--------hcC--CceEEeeecccccCCCccccccchHHHhcCHHHH
Confidence 5210 112356678899999999999999 998 69999999999764311 10 11 13588
Q ss_pred HHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHH
Q 013811 221 TEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298 (436)
Q Consensus 221 ~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~ 298 (436)
+.+.+++|+.||+..+.++. |+...+.. . ..-.+++... ..-.||.++++.....-.+ .. +
T Consensus 159 ~~af~~Ar~~dP~a~L~~Nd---yn~~~~~k---~---~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~--~~----~-- 221 (331)
T 1n82_A 159 EQAFLYAYEADPDALLFYND---YNECFPEK---R---EKIFALVKSLRDKGIPIHGIGMQAHWSLTRP--SL----D-- 221 (331)
T ss_dssp HHHHHHHHHHCTTSEEEEEE---SSTTSHHH---H---HHHHHHHHHHHHTTCCCCEEEECCEEESSSS--CH----H--
T ss_pred HHHHHHHHHHCCCCEEEEec---ccCCCchh---H---HHHHHHHHHHHHCCCccceEEeceecCCCCC--CH----H--
Confidence 89999999999999887643 22111100 0 0000122111 1124898888443211000 11 1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC-----C------ChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPG-----Y------STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 299 ~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g-----~------~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.+.+.++.... +++||.|+|+++...... . .++.++++|+.++..+.+. ..++.|.++|.+.|
T Consensus 222 --~~~~~l~~~a~-~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~---~~~v~git~Wg~~D 295 (331)
T 1n82_A 222 --EIRAAIERYAS-LGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEY---RDVIQSVTFWGIAD 295 (331)
T ss_dssp --HHHHHHHHHHT-TTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEESCSBT
T ss_pred --HHHHHHHHHHh-cCCeEEEEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhC---cCcccEEEEECCCC
Confidence 23444444444 899999999998764210 0 1456778888888766553 22367799999998
Q ss_pred C
Q 013811 368 E 368 (436)
Q Consensus 368 ~ 368 (436)
.
T Consensus 296 ~ 296 (331)
T 1n82_A 296 D 296 (331)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=143.06 Aligned_cols=244 Identities=13% Similarity=0.154 Sum_probs=155.6
Q ss_pred HHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEe-cccCCCCCCChhhhhhHHhhc
Q 013811 73 AFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS-LANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~-l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+.+.+ +.++|.+++= .+..|..++|.+|.|+ |..+|.+++.|+++||+|..- |. |.. +.|.|....
T Consensus 53 ~~~l~-~~~fn~vt~e--N~~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtlv--W~~-----q~P~W~~~d 119 (378)
T 1ur1_A 53 LNTLI-AKEFNSITPE--NCMKWGVLRDAQGQWN---WKDADAFVAFGTKHNLHMVGHTLV--WHS-----QIHDEVFKN 119 (378)
T ss_dssp HHHHH-HHHCSEEEES--STTSHHHHBCTTCCBC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SSCGGGTBC
T ss_pred HHHHH-HccCCeEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEeeccc--ccc-----cCchhhhcC
Confidence 44445 5599999971 1234677899999999 889999999999999998652 32 322 357787421
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---C--hHHH-HHHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---S--GRTI-QAWITEMAS 225 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~--~~~~-~~w~~~~~~ 225 (436)
. ....++.+..++..+++++.+++| |++ .|.+|++.|||-..... + .+.+ ..+++.+.+
T Consensus 120 ~-----~g~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~ 184 (378)
T 1ur1_A 120 A-----DGSYISKAALQKKMEEHITTLAGR--------YKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFT 184 (378)
T ss_dssp T-----TSCBCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHH
T ss_pred C-----CCCCCCHHHHHHHHHHHHHHHHHH--------hCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHH
Confidence 0 012345678899999999999999 998 78899999999864310 1 0111 367888999
Q ss_pred HhhccCCCCEEEeCCCcccCCCCCccccCCCCCccc-chhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHH
Q 013811 226 YVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIG-TDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWL 302 (436)
Q Consensus 226 ~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g-~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i 302 (436)
++|+.||+..+.++. |+... |+-... .++++.. ..-.||.+++|.......+ +. + .+
T Consensus 185 ~Ar~~dP~a~L~~Nd---yn~~~-------~~k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p--~~----~----~i 244 (378)
T 1ur1_A 185 LANEVDPKAHLMYND---YNIER-------TGKREATVEMIERLQKRGMPIHGLGIQGHLGIDTP--PI----A----EI 244 (378)
T ss_dssp HHHHHCTTSEEEEEE---SSTTS-------TTHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS--CH----H----HH
T ss_pred HHHHhCCCCEEEecc---ccccc-------cchhHHHHHHHHHHHHCCCCcceEEecCcCCCCCC--CH----H----HH
Confidence 999999998887653 22211 110000 0122111 2234899999543211001 11 1 23
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCCC------------------------CCC---hHHHHHHHHHHHHHHHHHhhcCC
Q 013811 303 DTHIQDAEHILRKPILLAEFGKSRKDP------------------------GYS---TYQRDVMFNTVYYKIYSSAKRGG 355 (436)
Q Consensus 303 ~~~~~~a~~~~~kPv~i~EfG~~~~~~------------------------g~~---~~~r~~~~~~~~~~i~~~~~~~~ 355 (436)
.+.++.... +++||.|+|+++..... +.+ .+.++++|+.++..+++.. .
T Consensus 245 ~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~QA~~y~~~~~~~~~~~---~ 320 (378)
T 1ur1_A 245 EKSIIAFAK-LGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHS---D 320 (378)
T ss_dssp HHHHHHHHT-TTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---T
T ss_pred HHHHHHHHh-cCCeEEEEecccCCCCccccccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcc---C
Confidence 444444454 89999999999875421 011 3456777777777665531 2
Q ss_pred CccceeecccccC
Q 013811 356 AAAGGLFWQLLTE 368 (436)
Q Consensus 356 ~~~G~~~W~~~~~ 368 (436)
++.|.++|.+.|.
T Consensus 321 ~V~git~WG~~D~ 333 (378)
T 1ur1_A 321 KIDRATFWGVSDD 333 (378)
T ss_dssp TEEEEEESCSBGG
T ss_pred ceeEEEEECCccC
Confidence 3567999999985
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.4e-14 Score=147.01 Aligned_cols=176 Identities=13% Similarity=0.171 Sum_probs=132.1
Q ss_pred EeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhH
Q 013811 34 RTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGL 113 (436)
Q Consensus 34 ~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~l 113 (436)
+++ ..|++||||+.+.|..+|+... .++.++++|+.||++|+|+||++++ |+..+|.+|+||-+....|
T Consensus 5 ~i~-~~f~~dG~p~~i~~G~~Hy~r~------p~~~W~d~l~kmKa~G~NtV~~yv~----W~~hEP~~G~fdF~g~~dL 73 (595)
T 4e8d_A 5 EIR-DDFYLDGKSFKILSGAIHYFRV------PPEDWYHSLYNLKALGFNTVETYVA----WNLHEPCEGEFHFEGDLDL 73 (595)
T ss_dssp EES-SSEEETTEECCCEEEEECGGGS------CGGGHHHHHHHHHHTTCCEEEEECC----HHHHCSBTTBCCCSGGGCH
T ss_pred EeC-CEEEECCEEEEEEEEEeChhhC------CHHHHHHHHHHHHHcCCCEEEEecc----HHHcCCCCCeecccchhhH
Confidence 566 8999999999999999876533 2478999999999999999999776 6678999999996666669
Q ss_pred HHHHHHHHHcCCEEEEe----cccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccc
Q 013811 114 DFVIAEARKYGIKLILS----LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189 (436)
Q Consensus 114 D~~i~~a~~~Gi~vil~----l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~ 189 (436)
|.+|+.|+++||+||+. .+..|. .|| .|.|...... .---+||..+++.++++++|++++-+ ..
T Consensus 74 ~~fl~~a~~~Gl~VilrpGPYi~aEw~-~GG---~P~WL~~~p~-----~lRt~~p~y~~~~~~~~~~l~~~l~~---~~ 141 (595)
T 4e8d_A 74 EKFLQIAQDLGLYAIVRPSPFICAEWE-FGG---LPAWLLTKNM-----RIRSSDPAYIEAVGRYYDQLLPRLVP---RL 141 (595)
T ss_dssp HHHHHHHHHTTCEEEEECCSCCCTTBG-GGG---CCGGGGGSSS-----CSSSSCHHHHHHHHHHHHHHGGGTGG---GB
T ss_pred HHHHHHHHHcCCEEEEecCCceecccC-CCc---CChhhccCCc-----eeccCCHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 99999999999999999 444453 366 4677654211 11135788999999999999988533 33
Q ss_pred cCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 190 yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+.+.+.|++|++.||..... +...+.+|+++++.. ..-+.++.
T Consensus 142 ~~~GgpVI~~QvENEyG~~~--~~~~Y~~~l~~~~~~---~Gi~vpl~ 184 (595)
T 4e8d_A 142 LDNGGNILMMQVENEYGSYG--EDKAYLRAIRQLMEE---CGVTCPLF 184 (595)
T ss_dssp GGGTSCEEEEESSSSGGGTC--CCHHHHHHHHHHHHH---TTCCSCEE
T ss_pred cccCCCEEEEEccccccccC--CcHHHHHHHHHHHHH---cCCcEEEE
Confidence 55667799999999997654 245666776666543 44444443
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.3e-13 Score=134.22 Aligned_cols=170 Identities=22% Similarity=0.323 Sum_probs=124.5
Q ss_pred CCCCEEee--CCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCC-CCCC--ccC-
Q 013811 29 GDGFIRTR--GSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGG-YRPL--QRS- 101 (436)
Q Consensus 29 ~~~fv~v~--g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~-~~~l--q~~- 101 (436)
..|.|+|+ +.+|+. ||+|||+.|-..|.+.... ++++++..|+..++.|+|+||+-++++.. ++.. -|-
T Consensus 14 ~hg~l~Vs~~~r~f~~~dG~PFf~lgDT~W~l~~~l----~~~e~~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~ 89 (463)
T 3kzs_A 14 SNGKLVVSEEGRYLKHENGTPFFWLGETGWLLPERL----NRDEAEYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMT 89 (463)
T ss_dssp GGCCEEECTTSSCEEETTSCBCCEEEEECTTHHHHC----CHHHHHHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCS
T ss_pred cCCCeEEcCCCceEecCCCCeEEechhHHHHHhcCC----CHHHHHHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcC
Confidence 45779997 456887 9999999999874332222 34789999999999999999997652210 1110 111
Q ss_pred CC----CCCh----hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHH
Q 013811 102 PG----SYNE----QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKN 173 (436)
Q Consensus 102 pg----~~~~----~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~ 173 (436)
.| .+++ +.|+++|++|+.|.++||++.|.+. |.. ++. .+ .++ .+..+.
T Consensus 90 ~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~--Wg~------~v~----~~--------~m~----~e~~~~ 145 (463)
T 3kzs_A 90 DGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCI--WGS------PVS----HG--------EMN----VDQAKA 145 (463)
T ss_dssp STTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESS--CHH------HHH----TT--------SCC----HHHHHH
T ss_pred CCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEE--eCC------ccc----cC--------CCC----HHHHHH
Confidence 12 4555 8999999999999999999998775 521 221 11 122 345678
Q ss_pred HHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCC
Q 013811 174 LIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLE 241 (436)
Q Consensus 174 ~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~ 241 (436)
|++.|++| |++.|+|+ |.|+||-.... -.+..++|++.||+.||+||+|+...
T Consensus 146 Y~ryl~~R--------y~~~~Nii-W~lgGD~~~~~------~~~~w~~~~~~i~~~dp~~L~T~H~~ 198 (463)
T 3kzs_A 146 YGKFLAER--------YKDEPNII-WFIGGDIRGDV------KTAEWEALATSIKAIDKNHLMTFHPR 198 (463)
T ss_dssp HHHHHHHH--------HTTCSSEE-EEEESSSCTTS------SHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred HHHHHHHH--------hccCCCCE-EEeCCCCCCcc------CHHHHHHHHHHHHhcCCCCcEEEeCC
Confidence 89999999 99999998 99999998752 23456888999999999999998653
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.9e-14 Score=136.10 Aligned_cols=236 Identities=15% Similarity=0.206 Sum_probs=149.8
Q ss_pred HHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcC
Q 013811 73 AFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQG 152 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G 152 (436)
+.+.+ +.++|.+++= .+-.|..++|++|.|+ |..+|++++.|+++||+|.....- |.. +.|.|....
T Consensus 31 ~~~~~-~~~fn~vt~e--n~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv-W~~-----q~P~W~~~~- 97 (303)
T 1ta3_B 31 NEAIV-ASQFGVITPE--NSMKWDALEPSQGNFG---WSGADYLVDYATQHNKKVRGHTLV-WHS-----QLPSWVSSI- 97 (303)
T ss_dssp HHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTC-
T ss_pred HHHHH-HhhCCEEEEC--ccccHHHhCCCCCccC---chHHHHHHHHHHHCCCEEEEeecc-ccC-----CCChhhhcC-
Confidence 33444 6799999971 1224677899999999 889999999999999998754321 432 457887531
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--HHH-HHHHHHHHHH
Q 013811 153 QFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--RTI-QAWITEMASY 226 (436)
Q Consensus 153 ~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~~~-~~w~~~~~~~ 226 (436)
.+.+.+++.++++++.+++| |++. |.+|++.|||-..... +. ..+ ..+++.+.++
T Consensus 98 ---------~~~~~~~~~~~~~i~~v~~r--------Y~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~ 158 (303)
T 1ta3_B 98 ---------GDANTLRSVMTNHINEVVGR--------YKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFET 158 (303)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHHHHHHh--------cCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHH
Confidence 12346789999999999999 9985 8899999999653210 10 011 3678899999
Q ss_pred hhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHhHHHHHHHH
Q 013811 227 VKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQLSFLNNWL 302 (436)
Q Consensus 227 Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~i 302 (436)
+|+.||+..+.++. |+...+. .+--..-.+++..+ ..-.+|.+++ |..... . +.+. +
T Consensus 159 Ar~~dP~a~L~~Nd---yn~~~~~----~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-~---~~~~--------~ 219 (303)
T 1ta3_B 159 ARAADPDAKLYIND---YNLDSAS----YAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSH-W---SSTE--------A 219 (303)
T ss_dssp HHHHCTTSEEEEEE---SCCCCTT----SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTC-C---CGGG--------H
T ss_pred HHHHCCCCEEEecc---ccccCCc----hHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCC-C---CHHH--------H
Confidence 99999999888753 2221110 00000001122211 1223898888 554321 1 1111 2
Q ss_pred HHHHHHHHHhcCC-cEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCC
Q 013811 303 DTHIQDAEHILRK-PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFR 374 (436)
Q Consensus 303 ~~~~~~a~~~~~k-Pv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~ 374 (436)
.+.++...+ +++ ||.|+|+++... +.+.|+.++..+.+ .+.+.|.++|.+.|. .+|.
T Consensus 220 ~~~l~~~a~-~G~~pi~iTEldi~~~--------qa~~y~~~~~~~~~----~~~v~git~Wg~~D~--~sW~ 277 (303)
T 1ta3_B 220 AGALSSLAN-TGVSEVAITELDIAGA--------ASSDYLNLLNACLN----EQKCVGITVWGVSDK--DSWR 277 (303)
T ss_dssp HHHHHHHHT-TCCSEEEEEEEEETTC--------CHHHHHHHHHHHHT----CTTEEEEEESCSBGG--GSTT
T ss_pred HHHHHHHHH-CCCCeEEEeeCCcChh--------HHHHHHHHHHHHHh----CCCceEEEEecCCcC--CCcc
Confidence 333333344 798 999999999732 34556666655443 346789999999985 2464
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-14 Score=136.99 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=153.9
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
.++..+.+.++|.+++= .+-.|..++|++|.|+ |..+|++++.|+++||+|..-.. .|.. +.|.|...
T Consensus 28 ~~~~~~~~~~fn~vt~e--N~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtl-vW~~-----q~P~W~~~- 95 (313)
T 1v0l_A 28 STYTSIAGREFNMVTAE--NEMKIDATEPQRGQFN---FSSADRVYNWAVQNGKQVRGHTL-AWHS-----QQPGWMQS- 95 (313)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCHHHHT-
T ss_pred HHHHHHHHhcCCEEEEC--CcccHHHhCCCCCccC---chHHHHHHHHHHHCCCEEEEEee-cCcC-----cCchhhhc-
Confidence 45667777899999971 1234677899999999 78899999999999999854321 1432 45778742
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---ChHHH----HHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SGRTI----QAWITEMA 224 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~~~~----~~w~~~~~ 224 (436)
.+.+..++..+++++.+++| |++. |.+|++.|||-..... ....+ ..|++.+.
T Consensus 96 ----------~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af 155 (313)
T 1v0l_A 96 ----------LSGSALRQAMIDHINGVMAH--------YKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAF 155 (313)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHH--------cCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHHH
Confidence 24567899999999999999 9975 8899999999764211 00111 45788999
Q ss_pred HHhhccCCCCEEEeCCCcccCCCCCccccCCCCCc-ccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHhHHHHH
Q 013811 225 SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD-IGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQLSFLN 299 (436)
Q Consensus 225 ~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~-~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~ 299 (436)
+++|+.||+..+.++. |+.... ++.-. .-.+++... ..-.||.+++ |.... +.....
T Consensus 156 ~~Ar~~dP~a~L~~Nd---yn~~~~-----~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~-~~~~~~--------- 217 (313)
T 1v0l_A 156 RTARAADPSAKLCYND---YNVENW-----TWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSG-SPYNSN--------- 217 (313)
T ss_dssp HHHHHHCTTSEEEEEE---SSCCST-----TSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTT-BCCCTT---------
T ss_pred HHHHhhCCCCEEEEec---cccccC-----ChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCC-CCCHHH---------
Confidence 9999999999887643 222110 00000 001122211 1223788888 64332 111111
Q ss_pred HHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCC
Q 013811 300 NWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFR 374 (436)
Q Consensus 300 ~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~ 374 (436)
+.+.++...+ +++||.|+|+++.. .+.++|+.++..+++. +.+.|.++|.+.|. .+|.
T Consensus 218 --~~~~l~~~a~-~G~pv~iTEldi~~--------~qa~~y~~~~~~~~~~----~~v~git~Wg~~D~--~sW~ 275 (313)
T 1v0l_A 218 --FRTTLQNFAA-LGVDVAITELDIQG--------APASTYANVTNDCLAV----SRCLGITVWGVRDS--DSWR 275 (313)
T ss_dssp --HHHHHHHHHT-TTCEEEEEEEEETT--------CCHHHHHHHHHHHHTC----TTEEEEEESCSBGG--GSTT
T ss_pred --HHHHHHHHHh-cCCeEEEEeCCccH--------HHHHHHHHHHHHHHhc----CCceEEEEECCCCC--CCcc
Confidence 2333334444 89999999999872 2456677777665443 46789999999885 2464
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.8e-14 Score=140.48 Aligned_cols=249 Identities=16% Similarity=0.171 Sum_probs=155.9
Q ss_pred HHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc-
Q 013811 73 AFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ- 151 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~- 151 (436)
+.+.+ +.++|.|++- .+..|..++|++|.|+ |..+|++++.|+++||+|.....- |.. +.|.|....
T Consensus 31 ~~~l~-~~~fn~vt~e--n~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv-W~~-----q~P~W~~~~~ 98 (356)
T 2dep_A 31 IAELY-KKHVNMLVAE--NAMKPASLQPTEGNFQ---WADADRIVQFAKENGMELRFHTLV-WHN-----QTPDWFFLDK 98 (356)
T ss_dssp HHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-ESS-----SCCGGGGBCT
T ss_pred HHHHH-HhhCCEEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeecc-ccc-----cCchhhhccC
Confidence 44455 5799999981 1224777899999999 889999999999999998753211 321 457777531
Q ss_pred -CCCCCC-CC---CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----Ch--HHH-HH
Q 013811 152 -GQFLTS-DD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----SG--RTI-QA 218 (436)
Q Consensus 152 -G~~~~~-~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----~~--~~~-~~ 218 (436)
|.+... .. ..++.+..++..+++++.+++| |++ .|.+|++.|||.....+ +. ..+ ..
T Consensus 99 ~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~r--------Y~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~ 168 (356)
T 2dep_A 99 EGKPMVEETDPQKREENRKLLLQRLENYIRAVVLR--------YKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTE 168 (356)
T ss_dssp TSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTH
T ss_pred cCCccccccccccCCCCHHHHHHHHHHHHHHHHHH--------hCC--ceeEEEeecccccCCCCCCccCChHHHhccHH
Confidence 211000 00 0235567889999999999999 998 69999999999764310 00 111 36
Q ss_pred HHHHHHHHhhc-cCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhH
Q 013811 219 WITEMASYVKS-IDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRD 293 (436)
Q Consensus 219 w~~~~~~~Ir~-~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~ 293 (436)
|+..+.+++|+ .||+..+.++. |+...+.. .+ .-.++++.. ..-.||.+++ |.... +. +.
T Consensus 169 ~i~~af~~Ar~~~dP~a~L~~Nd---yn~~~~~k--~~----~~~~~v~~l~~~G~~idgiG~Q~H~~~~-~p---~~-- 233 (356)
T 2dep_A 169 YIEVAFRATREAGGSDIKLYIND---YNTDDPVK--RD----ILYELVKNLLEKGVPIDGVGHQTHIDIY-NP---PV-- 233 (356)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEE---SCTTSHHH--HH----HHHHHHHHHHHTTCCCCEEEECCEEESS-CS---CH--
T ss_pred HHHHHHHHHHHhcCCCcEEEecc---ccccCcch--HH----HHHHHHHHHHHCCCCccEEEeeeeecCC-CC---CH--
Confidence 88999999999 99999887753 22211100 00 001122111 1223898888 64332 11 11
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-----C---CC---hHHHHHHHHHHHHHHHHHhhcCCCccceee
Q 013811 294 QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-----G---YS---TYQRDVMFNTVYYKIYSSAKRGGAAAGGLF 362 (436)
Q Consensus 294 ~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-----g---~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~ 362 (436)
+ .+.+.++.... +++||.|||+++..... . .+ ++.++++|+.++..+.+. .+.+.|.++
T Consensus 234 --~----~~~~~l~~~a~-~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~---~~~v~gvt~ 303 (356)
T 2dep_A 234 --E----RIIESIKKFAG-LGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKEN---KDIVSAVVF 303 (356)
T ss_dssp --H----HHHHHHHHHHT-TTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTT---GGGEEEEEE
T ss_pred --H----HHHHHHHHHHh-CCCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhh---cCCeeEEEE
Confidence 1 23444444444 89999999999875421 1 11 345667777777665432 135679999
Q ss_pred cccccC
Q 013811 363 WQLLTE 368 (436)
Q Consensus 363 W~~~~~ 368 (436)
|.+.|.
T Consensus 304 Wg~~D~ 309 (356)
T 2dep_A 304 WGISDK 309 (356)
T ss_dssp SCSBTT
T ss_pred ecCccC
Confidence 999986
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-13 Score=138.74 Aligned_cols=239 Identities=16% Similarity=0.190 Sum_probs=154.9
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
.++..+.+.++|.+++= .+..|..++|.+|.|+ |..+|++++.|+++||+|..-.. .|.. +.|.|...
T Consensus 28 ~~~~~~~~~~fn~~t~e--n~~kw~~~ep~~g~~~---f~~~D~~~~~a~~~gi~v~ghtl-vW~~-----q~P~W~~~- 95 (436)
T 2d1z_A 28 SAYTTIASREFNMVTAE--NEMKIDATEPQRGQFN---FSAGDRVYNWAVQNGKQVRGHTL-AWHS-----QQPGWMQS- 95 (436)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECST-----TCCHHHHT-
T ss_pred HHHHHHHHHhCCeeeec--cccccccccCCCCccC---hHHHHHHHHHHHHCCCEEEEEEE-EeCC-----CCchhhhc-
Confidence 45667777899999971 1234677899999999 88999999999999999865321 1432 45788742
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC------ChHHH-HHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP------SGRTI-QAWITEMA 224 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~------~~~~~-~~w~~~~~ 224 (436)
++.+..++.++++++.+++| |++ .|..|++.|||...... .-..+ ..|++.+.
T Consensus 96 ----------~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af 155 (436)
T 2d1z_A 96 ----------LSGSTLRQAMIDHINGVMGH--------YKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAF 155 (436)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHHHHHHh--------cCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHH
Confidence 35577899999999999999 996 68899999999753210 00112 46889999
Q ss_pred HHhhccCCCCEEEeCCCcccCCCCCccccCCCCCc-ccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHH
Q 013811 225 SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD-IGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNW 301 (436)
Q Consensus 225 ~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~-~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~ 301 (436)
+++|+.||+..+.+.. |+...+ ++.-. .-..++... ..-.+|.++++.|.....+. .+.
T Consensus 156 ~~Ar~~dP~a~l~~Nd---yn~~~~-----~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~--~~~-------- 217 (436)
T 2d1z_A 156 RTARAADPAAKLCYND---YNIENW-----TWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPY--NSN-------- 217 (436)
T ss_dssp HHHHHHCTTSEEEEEE---SSCCST-----TSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC--CTT--------
T ss_pred HHHHhhCCCCEEEEec---cccccC-----ChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCCCC--HHH--------
Confidence 9999999998887643 222110 00000 000111111 11248999996554211111 111
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCC
Q 013811 302 LDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRD 375 (436)
Q Consensus 302 i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~d 375 (436)
+.+.++...+ +++||+|+|+++.. .++++|+.++..+.+ .+.+.|.++|.+.|. ..|.+
T Consensus 218 ~~~~l~~~a~-~g~~v~iTEldv~~--------~qa~~y~~~~~~~~~----~~~~~gvt~Wg~~d~--~sW~~ 276 (436)
T 2d1z_A 218 FRTTLQNFAA-LGVDVAITELDIQG--------ASSSTYAAVTNDCLA----VSRCLGITVWGVRDT--DSWRS 276 (436)
T ss_dssp HHHHHHHHHT-TTCEEEEEEEEETT--------CCHHHHHHHHHHHHT----CTTEEEEEESCSBGG--GCTTG
T ss_pred HHHHHHHHHH-cCCeEEEeecchhH--------HHHHHHHHHHHHHHh----cCCceEEEeccccCC--ccccc
Confidence 2233333344 89999999999873 245667777765543 346789999999885 24543
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6.9e-13 Score=132.26 Aligned_cols=252 Identities=15% Similarity=0.136 Sum_probs=156.9
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
++.+.| +.++|.|++= .+-.|..++|.+|.|+ |..+|++++.|+++||+|.....- |.. +.|.|....
T Consensus 43 ~~~~l~-~~~fn~vt~e--Ne~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~vrghtlv-W~~-----q~P~W~~~~ 110 (379)
T 1r85_A 43 KDVQML-KRHFNSIVAE--NVMKPISIQPEEGKFN---FEQADRIVKFAKANGMDIRFHTLV-WHS-----QVPQWFFLD 110 (379)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEECSC-CST-----TCCGGGGBC
T ss_pred HHHHHH-HhhCCeEEEC--CcccHHHhcCCCCccC---chhHHHHHHHHHHCCCEEEEeccc-ccc-----cCchhhhcC
Confidence 445555 5699999982 1234677899999999 889999999999999998765321 432 346777531
Q ss_pred --CCCCCC-CCC---CCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--HHH-HHH
Q 013811 152 --GQFLTS-DDD---FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--RTI-QAW 219 (436)
Q Consensus 152 --G~~~~~-~~~---f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~~~-~~w 219 (436)
|..... .+. ..+.+..++..+++++.+++| |++ .|..|++.|||-..... +. ..+ ..+
T Consensus 111 ~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~ 180 (379)
T 1r85_A 111 KEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVER--------YKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDY 180 (379)
T ss_dssp TTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHH
T ss_pred cCCccccccccccccCCCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEeecccccCCCCccCchHHHhhhHHH
Confidence 110000 000 234456789999999999999 998 78999999999764310 10 011 368
Q ss_pred HHHHHHHhhc-cCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHH
Q 013811 220 ITEMASYVKS-IDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLS 296 (436)
Q Consensus 220 ~~~~~~~Ir~-~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~ 296 (436)
+..+.+++|+ .||+..+.++. |+...+.. ...-.++++.+ ..-.||.+++|.......+ .. +
T Consensus 181 i~~af~~Ar~~adP~a~L~~ND---yn~~~~~k------~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p--~~----~ 245 (379)
T 1r85_A 181 IKVAFQAARKYGGDNIKLYMND---YNTEVEPK------RTALYNLVKQLKEEGVPIDGIGHQSHIQIGWP--SE----A 245 (379)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEE---SCTTSTTH------HHHHHHHHHHHHHTTCCCCEEEECCEECSSSS--CH----H
T ss_pred HHHHHHHHHhhCCCCCEEEecc---cccccchh------HHHHHHHHHHHHHCCCceeEEEEeEEecCCCC--CH----H
Confidence 8899999999 99998887643 22211100 00000122211 1223799898433211001 11 1
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC------C------CChHHHHHHHHHHHHHHHHHhhcCCCccceeecc
Q 013811 297 FLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP------G------YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364 (436)
Q Consensus 297 ~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~------g------~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~ 364 (436)
. +.+.++.... +++||.|||+++..... + ..++.++++|+.++..+++.. .++.|.++|.
T Consensus 246 ~----~~~~l~~~a~-lGlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~---~~V~git~WG 317 (379)
T 1r85_A 246 E----IEKTINMFAA-LGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLS---DKISNVTFWG 317 (379)
T ss_dssp H----HHHHHHHHHH-TTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTG---GGEEEEEESS
T ss_pred H----HHHHHHHHHh-cCCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhCc---CceeEEEEeC
Confidence 1 3344444444 89999999999876421 1 013567788888888776642 1366799999
Q ss_pred cccC
Q 013811 365 LLTE 368 (436)
Q Consensus 365 ~~~~ 368 (436)
+.|.
T Consensus 318 ~~D~ 321 (379)
T 1r85_A 318 IADN 321 (379)
T ss_dssp SSTT
T ss_pred CcCC
Confidence 9985
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=99.46 E-value=4.1e-13 Score=138.07 Aligned_cols=247 Identities=12% Similarity=0.108 Sum_probs=158.9
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
++.+.+ +.++|.+++= .+-.|..++|.+|.|+ |..+|++++.|+++||+|..-... |.. ..+.|.|....
T Consensus 196 ~~~~l~-~~~FN~vT~e--NemKW~~iEP~~G~~~---f~~~D~ivd~a~~nGi~VrgHtLv-Whs---~~q~P~Wv~~~ 265 (530)
T 1us2_A 196 REQAVV-KKHFNHLTAG--NIMKMSYMQPTEGNFN---FTNADAFVDWATENNMTVHGHALV-WHS---DYQVPNFMKNW 265 (530)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CCC---GGGSCHHHHTC
T ss_pred HHHHHH-HhhCCeEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeccc-ccc---cccCchHHhcC
Confidence 456666 5799999982 1224677899999999 889999999999999998754211 422 12567887532
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---CC--hHHH-----H--HH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---PS--GRTI-----Q--AW 219 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---~~--~~~~-----~--~w 219 (436)
. -+.+..++..+++++.+++| |++|+.|.+|++.|||-.... .. ...+ . .+
T Consensus 266 ~---------Gs~~~l~~~~~~~I~~vv~r--------Yk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~ 328 (530)
T 1us2_A 266 A---------GSAEDFLAALDTHITTIVDH--------YEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVY 328 (530)
T ss_dssp C---------SCHHHHHHHHHHHHHHHHHH--------HHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHH
T ss_pred C---------CCHHHHHHHHHHHHHHHHHH--------hCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHH
Confidence 1 03467899999999999999 999999999999999976431 00 1111 1 78
Q ss_pred HHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCC-cccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhHh
Q 013811 220 ITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRDQ 294 (436)
Q Consensus 220 ~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~ 294 (436)
++.+.+++|+.||+..+.+.. |+... +|.- ..-.++++.. ..-.||.+++ |..... + ..
T Consensus 329 i~~AF~~Ar~aDP~AkL~~ND---Yn~~~------~~~k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~--p--~~--- 392 (530)
T 1us2_A 329 IERAFQTARAADPAVILYYND---YNIEQ------NNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY--P--SI--- 392 (530)
T ss_dssp HHHHHHHHHHHCTTSEEEEEE---SSTTS------CSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC--S--CH---
T ss_pred HHHHHHHHHHHCCCCEEEecc---ccccc------ccchhHHHHHHHHHHHHCCCceeEEEEeeecCCCC--C--CH---
Confidence 899999999999998887643 22211 0100 0001122211 1224898888 543221 1 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC--------C---CCC---hHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 295 LSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD--------P---GYS---TYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 295 ~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~--------~---g~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
+ -+.+.++.... +++||.|+|+++.... + ..+ ++.+.++|+.++..+++. +..+.+.|.
T Consensus 393 -~----~i~~~L~~~a~-lGlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~-~~~~~v~GI 465 (530)
T 1us2_A 393 -A----NISAAMKKVVD-LGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDT-VPVNQRGGI 465 (530)
T ss_dssp -H----HHHHHHHHHHT-TTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHH-SCGGGEEEE
T ss_pred -H----HHHHHHHHHHh-cCCeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhh-ccCCceEEE
Confidence 1 13444444444 8999999999987542 0 011 456677888777766421 111357899
Q ss_pred eecccccC
Q 013811 361 LFWQLLTE 368 (436)
Q Consensus 361 ~~W~~~~~ 368 (436)
++|.+.|.
T Consensus 466 T~WG~~D~ 473 (530)
T 1us2_A 466 SVWGTTDA 473 (530)
T ss_dssp EESCSBGG
T ss_pred EEEcCcCC
Confidence 99999985
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=9.4e-13 Score=130.35 Aligned_cols=249 Identities=17% Similarity=0.158 Sum_probs=154.8
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEe-cccCCCCCCChhhhhhHHhh
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS-LANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~-l~~~w~~~gg~~~y~~W~~~ 150 (436)
++.+.+ +.++|.|++= .+..|..++|.+|.|+ |..+|.+++.|+++||+|..- |. |.. +.|.|...
T Consensus 33 ~~~~l~-~~~fn~vt~e--n~~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~v~ghtlv--W~~-----q~P~W~~~ 99 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAE--NAMKPVSLQPREGEWN---WEGADKIVEFARKHNMELRFHTLV--WHS-----QVPEWFFI 99 (356)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEECCSE--ESS-----SCCGGGGB
T ss_pred HHHHHH-HhcCCEEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeecc--ccc-----cCchhHhc
Confidence 444455 6799999971 1224677899999999 889999999999999998653 21 321 35677753
Q ss_pred --cCCCCC-CCCC---CCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---C--hHHH-HH
Q 013811 151 --QGQFLT-SDDD---FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---S--GRTI-QA 218 (436)
Q Consensus 151 --~G~~~~-~~~~---f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~--~~~~-~~ 218 (436)
.|.+.. .... ..+.+..++..+++++.+++| |++ .|.+|++.|||-..... + ...+ ..
T Consensus 100 ~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~ 169 (356)
T 2uwf_A 100 DENGNRMVDETDPEKRKANKQLLLERMENHIKTVVER--------YKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTD 169 (356)
T ss_dssp CTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTH
T ss_pred CCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHH--------cCC--cceEEEeecccccCCCCcccchHHhhccHH
Confidence 121100 0000 234456788999999999999 997 78999999999864311 1 0111 36
Q ss_pred HHHHHHHHhhc-cCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCCCCCCCChhH
Q 013811 219 WITEMASYVKS-IDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQWLSSSNDRD 293 (436)
Q Consensus 219 w~~~~~~~Ir~-~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~ 293 (436)
++..+.+++|+ .||+..+.++. |+...+.. .. .-.++++.. ..-.||-+++ |..... + +.
T Consensus 170 ~i~~af~~Ar~~~dP~a~L~~Nd---yn~~~~~k--~~----~~~~~v~~l~~~G~~idgiG~Q~H~~~~~--p--~~-- 234 (356)
T 2uwf_A 170 YIKVAFETARKYGGEEAKLYIND---YNTEVPSK--RD----DLYNLVKDLLEQGVPIDGVGHQSHIQIGW--P--SI-- 234 (356)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEE---SCTTSHHH--HH----HHHHHHHHHHHTTCCCCEEEECCEEESSC--S--CH--
T ss_pred HHHHHHHHHHhhCCCCCEEEecc---ccccccch--hH----HHHHHHHHHHHCCCcccEEEEEEecCCCC--C--CH--
Confidence 88899999999 99998887643 22111100 00 001122211 1224798888 654321 1 11
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC----------C---ChHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 294 QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG----------Y---STYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 294 ~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g----------~---~~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
+. +.+.++.... +++||.|||+++...... . .++.++++|+.++..+.+. .+.+.|.
T Consensus 235 --~~----~~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~---~~~v~gi 304 (356)
T 2uwf_A 235 --ED----TRASFEKFTS-LGLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEEL---SATISSV 304 (356)
T ss_dssp --HH----HHHHHHHHHT-TTCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHT---GGGEEEE
T ss_pred --HH----HHHHHHHHHh-cCCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhc---cCCEEEE
Confidence 11 3344444444 899999999998754210 0 1345677777777766542 1257899
Q ss_pred eecccccC
Q 013811 361 LFWQLLTE 368 (436)
Q Consensus 361 ~~W~~~~~ 368 (436)
++|.+.|.
T Consensus 305 t~WG~~D~ 312 (356)
T 2uwf_A 305 TFWGIADN 312 (356)
T ss_dssp EESSSSTT
T ss_pred EEECCCCC
Confidence 99999985
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.3e-12 Score=128.39 Aligned_cols=237 Identities=14% Similarity=0.179 Sum_probs=151.8
Q ss_pred HCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhcCCCCCC
Q 013811 79 SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQGQFLTS 157 (436)
Q Consensus 79 ~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~ 157 (436)
...+|.+.. . ++-.|..++|++|.|+ +...|.+++.|+++||.+.. +|. |.. +.|.|... |
T Consensus 55 ~~~Fn~~t~-e-N~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtLv--Wh~-----q~P~W~~~-~----- 116 (341)
T 3niy_A 55 RREFNILTP-E-NQMKWDTIHPERDRYN---FTPAEKHVEFAEENNMIVHGHTLV--WHN-----QLPGWITG-R----- 116 (341)
T ss_dssp HHHCSEEEE-S-STTSHHHHCCBTTEEE---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SCCHHHHT-S-----
T ss_pred HHhCCEEEE-C-cccchHHhcCCCCccC---hHHHHHHHHHHHHCCCeEEeeecc--ccc-----cCchhhhc-C-----
Confidence 346999986 1 2234677899999998 78899999999999999864 443 322 45788752 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---C--hHH-HHHHHHHHHHHhhccC
Q 013811 158 DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---S--GRT-IQAWITEMASYVKSID 231 (436)
Q Consensus 158 ~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~--~~~-~~~w~~~~~~~Ir~~D 231 (436)
-++.++.++.+.++++.+++| |++ .|.+|++.|||...... + ... -..|+..+.+++|+.|
T Consensus 117 ---~~~~~~~~~~~~~~i~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~d 183 (341)
T 3niy_A 117 ---EWTKEELLNVLEDHIKTVVSH--------FKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEAD 183 (341)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHH--------TTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHC
T ss_pred ---CCCHHHHHHHHHHHHHHHHHH--------cCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHC
Confidence 155678899999999999999 998 47899999999753211 1 011 1368889999999999
Q ss_pred CCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHH
Q 013811 232 RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDA 309 (436)
Q Consensus 232 p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a 309 (436)
|+..+.+.. |+...+ ++--..-..+++.+ ..-.||-++++.....-. .+.+ -+.+.++..
T Consensus 184 P~a~L~~ND---yn~e~~-----~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~--~~~~--------~~~~~l~~~ 245 (341)
T 3niy_A 184 PDAILIYND---YSIEEI-----NAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYRG--LNYD--------SFRRNLERF 245 (341)
T ss_dssp TTSEEEEEE---SSCSSS-----SHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTC--CCHH--------HHHHHHHHH
T ss_pred CCceEEeec---cccccC-----chHHHHHHHHHHHHHHCCCCcceEeeeeecCCCC--CCHH--------HHHHHHHHH
Confidence 998887643 232110 00000000122111 112378766655532111 1111 133444444
Q ss_pred HHhcCCcEEEEecCCCCCCCCC---ChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 310 EHILRKPILLAEFGKSRKDPGY---STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 310 ~~~~~kPv~i~EfG~~~~~~g~---~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.. +++||.|||+++....+.. ..+.+.++|+.++..+++. +.+.|.++|.+.|..
T Consensus 246 a~-lGl~v~iTElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~----~~v~git~Wg~~D~~ 303 (341)
T 3niy_A 246 AK-LGLQIYITEMDVRIPLSGSEDYYLKKQAEICAKIFDICLDN----PAVKAIQFWGFTDKY 303 (341)
T ss_dssp HH-TTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTC----TTEEEEEESCSBTTS
T ss_pred HH-cCCeEEEEeccccCCCCCChhHHHHHHHHHHHHHHHHHhcC----CCeEEEEEECCccCC
Confidence 44 8999999999986532211 1356777888887766553 468899999999863
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.2e-12 Score=125.38 Aligned_cols=246 Identities=15% Similarity=0.159 Sum_probs=154.2
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
++.+.+ ..++|.+++ - .+-.|..++|.+| |+ +..+|.+++.|+++||+|...... |.. ..+.|.|...
T Consensus 29 ~~~~~~-~~~fn~vt~-e-n~~kW~~~ep~~G-~~---f~~~D~~v~~a~~~gi~v~ghtl~-W~~---~~q~P~W~~~- 96 (348)
T 1w32_A 29 ARQNIV-RAEFNQITA-E-NIMKMSYMYSGSN-FS---FTNSDRLVSWAAQNGQTVHGHALV-WHP---SYQLPNWASD- 96 (348)
T ss_dssp HHHHHH-HHHCSEEEE-S-STTSGGGGEETTE-EC---CHHHHHHHHHHHHTTCEEEEEEEE-CCC---GGGCCTTCST-
T ss_pred HHHHHH-HhhCCeEEE-C-CccchhhhccCCC-CC---chHHHHHHHHHHHCCCEEEEEeee-cCc---cccCchhhhc-
Confidence 344445 568999998 1 1224778899999 98 889999999999999998754211 421 1244666531
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC-----C-----C---C--hHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS-----D-----P---S--GRTI 216 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~-----~-----~---~--~~~~ 216 (436)
.++..++..+++++.+++| |++ .|..|++.|||-... . . + .+.+
T Consensus 97 -----------~~~~~~~~~~~~i~~v~~r--------Y~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~l 155 (348)
T 1w32_A 97 -----------SNANFRQDFARHIDTVAAH--------FAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQF 155 (348)
T ss_dssp -----------TCTTHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHH--------hCC--ceeEEEeecccccCCccccCCcccccccccchHHHhc
Confidence 1345899999999999999 996 788999999987643 1 0 0 1222
Q ss_pred --HHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCC-cccchhhhhc--CCCCcceEEe--ecCCCCCCCCC
Q 013811 217 --QAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVANN--LIPGIDFATV--HSYPDQWLSSS 289 (436)
Q Consensus 217 --~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~ 289 (436)
..++..+.+++|+.||+..+.+.. |+... +|.- ..-.++++.. ..-.||.+++ |..... +
T Consensus 156 gG~~~i~~aF~~Ar~adP~a~L~~ND---yn~~~------~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~--p-- 222 (348)
T 1w32_A 156 GGPEYIDEAFRRARAADPTAELYYND---FNTEE------NGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDY--P-- 222 (348)
T ss_dssp TSTHHHHHHHHHHHHHCTTSEEEEEE---SSTTS------CSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS--S--
T ss_pred CchHHHHHHHHHHHHhCCCCEEEecc---ccccc------CCchHHHHHHHHHHHHHCCCcccEEEeccccCCCC--C--
Confidence 568899999999999998887643 22210 1100 0001122211 1223898888 543221 1
Q ss_pred ChhHhHHHHHHHHHHHHHHHH--HhcCCcEEEEecCCCCCCC-------C-----------CChHHHHHHHHHHHHHHHH
Q 013811 290 NDRDQLSFLNNWLDTHIQDAE--HILRKPILLAEFGKSRKDP-------G-----------YSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~~a~--~~~~kPv~i~EfG~~~~~~-------g-----------~~~~~r~~~~~~~~~~i~~ 349 (436)
.. + -+.+.++... . +++||.|||+++..... + ..++.++++|+.++..+.+
T Consensus 223 ~~----~----~~~~~l~~~a~~~-~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~~~~~ 293 (348)
T 1w32_A 223 SI----A----NIRQAMQKIVALS-PTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLE 293 (348)
T ss_dssp CH----H----HHHHHHHHHHTTC-SSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CH----H----HHHHHHHHHhccc-CCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHHHHhc
Confidence 11 1 1344444444 4 89999999999875421 0 1134566777777766542
Q ss_pred HhhcCCCccceeecccccCCCCCCCC
Q 013811 350 SAKRGGAAAGGLFWQLLTEGMDAFRD 375 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g~~~~~d 375 (436)
. +..+.+.|.++|.+.|. .+|.+
T Consensus 294 ~-~~~~~v~git~WG~~D~--~sW~~ 316 (348)
T 1w32_A 294 V-VPPGRRGGITVWGIADP--DSWLY 316 (348)
T ss_dssp H-SCTTCEEEEEESCSBGG--GSTTS
T ss_pred c-ccCCceEEEEEECCccC--CccCC
Confidence 1 11235779999999986 34653
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=118.50 Aligned_cols=247 Identities=16% Similarity=0.213 Sum_probs=153.1
Q ss_pred HHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhcCC
Q 013811 75 HEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQGQ 153 (436)
Q Consensus 75 ~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~ 153 (436)
..+-...+|.+.. . .+-.|..+||.+|.|+ +..+|.+++.|+++||.|.. +|. |.. +.|.|.....
T Consensus 30 ~~~~~~~Fn~~t~-e-N~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtLv--Wh~-----q~P~W~~~~~- 96 (331)
T 3emz_A 30 GEFIAKHYNSVTA-E-NQMKFEEVHPREHEYT---FEAADEIVDFAVARGIGVRGHTLV--WHN-----QTPAWMFEDA- 96 (331)
T ss_dssp HHHHHHHCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEECCSB--CSS-----SCCGGGGBCT-
T ss_pred HHHHHHhCCEEEE-C-cccchhhhcCCCCccC---hhHHHHHHHHHHHCCCEEeeeeee--ccc-----cCcHhHhccc-
Confidence 4444567999997 1 2234677899999999 78899999999999999865 232 422 4577764210
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----Ch--HHH-HHHHHHHHH
Q 013811 154 FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----SG--RTI-QAWITEMAS 225 (436)
Q Consensus 154 ~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----~~--~~~-~~w~~~~~~ 225 (436)
....++.+..++.++++++.+++| |++ .|.+|++.|||-..... +. ..+ ..|+..+.+
T Consensus 97 ----~g~~~~~~~l~~~~~~~I~~v~~r--------Ykg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~ 162 (331)
T 3emz_A 97 ----SGGTASREMMLSRLKQHIDTVVGR--------YKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFN 162 (331)
T ss_dssp ----TSSBCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHH
T ss_pred ----cCCCCCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHH
Confidence 012244457889999999999999 998 58899999999754210 00 011 257888899
Q ss_pred HhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC--CCCcceEEe--ecCCCCCCCCCChhHhHHHHHHH
Q 013811 226 YVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL--IPGIDFATV--HSYPDQWLSSSNDRDQLSFLNNW 301 (436)
Q Consensus 226 ~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~--~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~ 301 (436)
+.|+.||+..+.+.. |+...+.. ...-..+++.+. .-.||-+++ |.-... + +. . .
T Consensus 163 ~Ar~adP~a~L~~ND---yn~~~~~k------~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~--p--~~----~----~ 221 (331)
T 3emz_A 163 MAHEADPNALLFYND---YNETDPVK------REKIYNLVRSLLDQGAPVHGIGMQGHWNIHG--P--SM----D----E 221 (331)
T ss_dssp HHHHHCTTSEEEEEE---SSCSSHHH------HHHHHHHHHHHHHHTCCCCEEEECCEEETTB--S--CH----H----H
T ss_pred HHHhhCCCceEEecc---ccccChHH------HHHHHHHHHHHHHCCCccceEEECceecCCC--C--CH----H----H
Confidence 999999998887653 22211100 000001222111 113776664 432221 1 11 1 2
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCCCC--------CCCCh---HHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCC
Q 013811 302 LDTHIQDAEHILRKPILLAEFGKSRKD--------PGYST---YQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 302 i~~~~~~a~~~~~kPv~i~EfG~~~~~--------~g~~~---~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~ 370 (436)
+.+.++.... +++||.|||+.+.... .+.++ +.+.++|+.++..+.+. .+.+.|.++|.+.|..
T Consensus 222 ~~~~l~~~a~-lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~---~~~v~giT~WG~~D~~- 296 (331)
T 3emz_A 222 IRQAIERYAS-LDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREY---RSNITSVTFWGVADNY- 296 (331)
T ss_dssp HHHHHHHHHT-TSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEESSSSTTC-
T ss_pred HHHHHHHHHH-cCCcEEEeecccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc---CCCeeEEEEECCCCCC-
Confidence 4444555554 8999999999987531 11222 45667777777766552 2357799999999963
Q ss_pred CCCCC
Q 013811 371 DAFRD 375 (436)
Q Consensus 371 ~~~~d 375 (436)
+|.+
T Consensus 297 -sW~~ 300 (331)
T 3emz_A 297 -TWLD 300 (331)
T ss_dssp -CGGG
T ss_pred -ccCC
Confidence 4543
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-11 Score=119.20 Aligned_cols=238 Identities=15% Similarity=0.202 Sum_probs=149.6
Q ss_pred HCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhcCCCCCC
Q 013811 79 SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQGQFLTS 157 (436)
Q Consensus 79 ~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~ 157 (436)
..-+|.+-. =++-.|..+||++|.|+ +...|.+++.|+++||.|.- +|. |.. +.|.|....
T Consensus 36 ~~~Fn~~t~--eN~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrGHtLv--Wh~-----q~P~W~~~~------ 97 (327)
T 3u7b_A 36 KNEIGSITP--ENAMKWEAIQPNRGQFN---WGPADQHAAAATSRGYELRCHTLV--WHS-----QLPSWVANG------ 97 (327)
T ss_dssp TTTCCEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEEEEEE--EST-----TCCHHHHTC------
T ss_pred HhhCCeEEE--CccccHHHhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeeee--cCC-----cCcHHHhcC------
Confidence 456887775 12334677899999999 78889999999999999863 332 321 467887531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-ChHHH-----HHHHHHHHHHhhccC
Q 013811 158 DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-SGRTI-----QAWITEMASYVKSID 231 (436)
Q Consensus 158 ~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-~~~~~-----~~w~~~~~~~Ir~~D 231 (436)
-++.++.++.++++++.+++| |++ .|.+|++.|||...... ....+ ..|+..+.++.|+.|
T Consensus 98 ---~~~~~~l~~~~~~~I~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~d 164 (327)
T 3u7b_A 98 ---NWNNQTLQAVMRDHINAVMGR--------YRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAAD 164 (327)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHC
T ss_pred ---CCCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHC
Confidence 145577889999999999999 998 48899999999754210 00011 257888899999999
Q ss_pred CCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEe--ecCCCC--C--CCCCChhHhHHHHHHHHH
Q 013811 232 RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATV--HSYPDQ--W--LSSSNDRDQLSFLNNWLD 303 (436)
Q Consensus 232 p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~--w--~~~~~~~~~~~~~~~~i~ 303 (436)
|+..+.+.. |+...+... .. .+ ..+++.+ ..-.||-+++ |..... . +...+ .+ .+.
T Consensus 165 P~a~L~~Nd---yn~e~~~~k-~~-~~---~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~----~~----~~~ 228 (327)
T 3u7b_A 165 PTTKLYYND---YNLEYGNAK-TE-GA---KRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPS----RA----KLA 228 (327)
T ss_dssp TTSEEEEEE---SSCTTCSHH-HH-HH---HHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCC----HH----HHH
T ss_pred CCCeEEecc---ccccCCchh-hH-HH---HHHHHHHHHCCCCcceEEEcccccccccccccCCCCC----HH----HHH
Confidence 999887653 232111000 00 00 0112111 1113776655 444310 0 00111 11 234
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 304 THIQDAEHILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 304 ~~~~~a~~~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
+.++.... +++||.|+|+++....+. ...+.+.++|+.++..+++. +.+.|.++|.+.|.
T Consensus 229 ~~l~~~a~-lGl~v~iTElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~----~~v~gIt~WG~~D~ 290 (327)
T 3u7b_A 229 SVLQGLAD-LGVDVAYTELDIRMNTPATQQKLQTNADAYARIVGSCMDV----KRCVGITVWGISDK 290 (327)
T ss_dssp HHHHHHHT-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHC----TTEEEEEESCSBGG
T ss_pred HHHHHHHh-cCCceEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhC----CCceEEEEEccCcC
Confidence 44444444 899999999998753221 12345677778777766553 46789999999986
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-10 Score=119.27 Aligned_cols=125 Identities=13% Similarity=0.181 Sum_probs=94.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEE--EecccCCC-----C
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLI--LSLANNYD-----S 137 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vi--l~l~~~w~-----~ 137 (436)
..+.++++|+.||++|+|+||+.+. |..++|. ||.|| |+.+|++|+.|+++||+|+ |.+|..-. .
T Consensus 27 ~~~~w~~dl~~mk~~Gln~Vr~~V~----W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~ 99 (516)
T 1vem_A 27 NWETFENDLRWAKQNGFYAITVDFW----WGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDC 99 (516)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc----hhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCC
Confidence 3589999999999999999999663 7778998 99999 7889999999999999999 77642100 1
Q ss_pred CCChhhhhhHHhhcCC--CC--CC--------CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEE-------
Q 013811 138 FGGKKQYVNWARSQGQ--FL--TS--------DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMA------- 198 (436)
Q Consensus 138 ~gg~~~y~~W~~~~G~--~~--~~--------~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~------- 198 (436)
.+ ..|.|....+. .+ .+ ...++.+....+.|.++++.+++| |+++|+|++
T Consensus 100 ~~---~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r--------~~~~~~vI~eI~vglG 168 (516)
T 1vem_A 100 NV---PIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAA--------MKPYKDVIAKIYLSGG 168 (516)
T ss_dssp CB---CCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHH--------TGGGGGGBCCEEECCS
T ss_pred CC---CCCHHHHhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHH--------HccCCCEEEEeecccc
Confidence 12 24667665321 00 00 011233445678899999999999 999999999
Q ss_pred ---------EEeecCCCCC
Q 013811 199 ---------WELMNEPRCT 208 (436)
Q Consensus 199 ---------weL~NEp~~~ 208 (436)
|++.||..+.
T Consensus 169 ~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 169 PAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp GGGBSSCCCCCTTTTCCTT
T ss_pred ccccccccccccccCcCCC
Confidence 9999998764
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.8e-09 Score=105.50 Aligned_cols=234 Identities=15% Similarity=0.143 Sum_probs=145.1
Q ss_pred CCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEe-cccCCCCCCChhhhhhHHhhcCCCCCCCC
Q 013811 81 GLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILS-LANNYDSFGGKKQYVNWARSQGQFLTSDD 159 (436)
Q Consensus 81 G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~-l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 159 (436)
.+|.+-. =++-.|..+||++|.|+ +...|.+++.|+++||.|.-- |. |.. +.|.|....+
T Consensus 40 ~Fn~~t~--eN~mKW~~~ep~~G~~~---f~~aD~~v~~a~~~gi~vrGHtLv--Wh~-----q~P~W~~~~~------- 100 (335)
T 4f8x_A 40 NFGEITP--ANAMKFMYTETEQNVFN---FTEGEQFLEVAERFGSKVRCHNLV--WAS-----QVSDFVTSKT------- 100 (335)
T ss_dssp HCSEEEE--SSTTSGGGTEEETTEEC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SCCHHHHTSC-------
T ss_pred hCCEEEE--CCccchHHhCCCCCccC---cchhHHHHHHHHHCCCEEEEeeec--ccc-----cCcHHHhcCC-------
Confidence 6898886 12335778999999999 888999999999999998532 21 422 4678875311
Q ss_pred CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--HH-HHHHHHHHHHHhhcc---
Q 013811 160 DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--RT-IQAWITEMASYVKSI--- 230 (436)
Q Consensus 160 ~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~~-~~~w~~~~~~~Ir~~--- 230 (436)
++.++.++.++++++.+++| |++ .|.+|++.|||-..... +. .. =..|+..+.++.|+.
T Consensus 101 --~~~~~l~~~~~~~I~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~ 168 (335)
T 4f8x_A 101 --WTAKELTAVMKNHIFKTVQH--------FGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQ 168 (335)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH--------HGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccc
Confidence 45567899999999999999 998 58899999999764210 10 00 125677778888888
Q ss_pred --CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecC--CCCCCCCCChhHhHHHHHHHHHH
Q 013811 231 --DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSY--PDQWLSSSNDRDQLSFLNNWLDT 304 (436)
Q Consensus 231 --Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y--~~~w~~~~~~~~~~~~~~~~i~~ 304 (436)
||+..+.+.. |+...+. +--..-..+++.+ ..-.||-++++.. ...+ .+. + .+.+
T Consensus 169 ~~dP~a~L~~ND---Yn~e~~~-----~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~---p~~----~----~~~~ 229 (335)
T 4f8x_A 169 IGANDVKLYYND---YGIENPG-----TKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGET---PSL----A----DQLA 229 (335)
T ss_dssp TTCTTSEEEEEE---SSCSSSS-----HHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC---CCH----H----HHHH
T ss_pred cCCCCcEEEEec---ccccCCc-----HhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCC---CCH----H----HHHH
Confidence 9998887643 2321110 0000000122111 1123776555443 2211 111 1 1333
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCC-CCCC---hHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 305 HIQDAEHILRKPILLAEFGKSRKD-PGYS---TYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 305 ~~~~a~~~~~kPv~i~EfG~~~~~-~g~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.++.... +++||.|||+.+.... +..+ .+.+.+.|+.++..+.+.. ..+.|.++|.+.|.
T Consensus 230 ~l~~~a~-lGl~v~iTElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~---~~v~git~WG~~D~ 293 (335)
T 4f8x_A 230 TKQAYIK-ANLDVAVTELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMNAG---PRCIGVVVWDFDDA 293 (335)
T ss_dssp HHHHHHH-TTCEEEEEEEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTC---TTEEEEEESCSBGG
T ss_pred HHHHHHH-cCCeeEEeeccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCc---CCeeEEEEEcCccC
Confidence 3444444 8999999999987542 2112 3455677777776654431 15789999999986
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=114.46 Aligned_cols=254 Identities=12% Similarity=0.139 Sum_probs=149.0
Q ss_pred CCCCEEEEccccCCCCCCCccCCCC------CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGS------YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQ 153 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~------~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~ 153 (436)
..+|.|.. . ++-.|..+++.+|. |+ |...|.+++.|+++||+|.--.. .|.. +.|.|....+.
T Consensus 214 ~~Fn~it~-e-N~mKw~~~e~~~g~~~~~~~~~---f~~aD~~v~~A~~ngi~vrGHtL-vWhs-----q~P~W~~~~~~ 282 (540)
T 2w5f_A 214 REFNSITC-E-NEMKPDATLVQSGSTNTNIRVS---LNRAASILNFCAQNNIAVRGHTL-VWHS-----QTPQWFFKDNF 282 (540)
T ss_dssp HHCSEEEE-S-STTSHHHHEEEEEEETTEEEEC---CTTTHHHHHHHHHTTCEEEEEEE-ECSS-----SCCGGGGBTTS
T ss_pred HhCCeecc-c-ccccccccccCCCCccccceec---hhHHHHHHHHHHHCCCEEEEEEE-EcCC-----CCchHHhccCc
Confidence 46777765 1 12234455666663 55 77889999999999999742110 1432 45778754221
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-C--cEEEEEeecCCCCCCC---------C-----C-hHH
Q 013811 154 FLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-P--TIMAWELMNEPRCTSD---------P-----S-GRT 215 (436)
Q Consensus 154 ~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p--~I~~weL~NEp~~~~~---------~-----~-~~~ 215 (436)
.....+.+.+.+++..+++++.++.| |+++ | .|.+|++.|||-.... . . ...
T Consensus 283 --~~~g~~~~~~~l~~~l~~~I~~vv~r--------y~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~ 352 (540)
T 2w5f_A 283 --QDNGNWVSQSVMDQRLESYIKNMFAE--------IQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSP 352 (540)
T ss_dssp --STTSCBCCHHHHHHHHHHHHHHHHHH--------HHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBH
T ss_pred --ccccCcCCHHHHHHHHHHHHHHHHHH--------hcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCH
Confidence 01112223345788999999999999 8875 4 3999999999976430 0 0 112
Q ss_pred HH------HHHHHHHHHhhccCCC-CEEEeCCCcccCCCCCccccCCCCCcccchhhhh-cCCCCcceEE--eecCCCCC
Q 013811 216 IQ------AWITEMASYVKSIDRN-HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN-NLIPGIDFAT--VHSYPDQW 285 (436)
Q Consensus 216 ~~------~w~~~~~~~Ir~~Dp~-~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~-~~~~~iD~~s--~H~Y~~~w 285 (436)
+. .|+..+.++.|+.||+ ..+.+.. |+...+.. ...-.+++.. ....-||-++ .|.-...-
T Consensus 353 w~~~~G~~~~i~~aF~~Ar~~dP~~a~L~~ND---yn~~~~~k------~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~ 423 (540)
T 2w5f_A 353 WVQIYGDNKFIEKAFTYARKYAPANCKLYYND---YNEYWDHK------RDCIASICANLYNKGLLDGVGMQSHINADMN 423 (540)
T ss_dssp HHHHHSSTTHHHHHHHHHHHHSCTTCEEEEEE---SSTTSHHH------HHHHHHHHHHHHHTTCCCEEEECCEEESCSS
T ss_pred HHHhhCcHHHHHHHHHHHHHhCCccceEEEEe---cccccccH------HHHHHHHHHHHHhCCcccEEEEeeEecCCCC
Confidence 22 6889999999999997 5554432 22111100 0000112221 1122277655 45433210
Q ss_pred CCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhh--cCCCccceeec
Q 013811 286 LSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAK--RGGAAAGGLFW 363 (436)
Q Consensus 286 ~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~--~~~~~~G~~~W 363 (436)
.. .. .+. +.+.++.... +++||.|+|+.+.......+++.++++|+.++..+++-.+ ..+.+.|.++|
T Consensus 424 ~~-~~----~~~----~~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~W 493 (540)
T 2w5f_A 424 GF-SG----IQN----YKAALQKYIN-IGCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVW 493 (540)
T ss_dssp ST-TC----HHH----HHHHHHHHHT-TTSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEES
T ss_pred CC-CC----HHH----HHHHHHHHHh-cCCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCceeEEEEE
Confidence 00 11 111 3333444444 8999999999998654334567888999999887764221 12357899999
Q ss_pred ccccCCCCCCCC
Q 013811 364 QLLTEGMDAFRD 375 (436)
Q Consensus 364 ~~~~~g~~~~~d 375 (436)
.+.|. ..|..
T Consensus 494 G~~D~--~sW~~ 503 (540)
T 2w5f_A 494 GPNDA--NTWLG 503 (540)
T ss_dssp SSSTT--SCTTC
T ss_pred cCCCC--CcccC
Confidence 99986 35653
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.93 E-value=4.7e-08 Score=101.21 Aligned_cols=215 Identities=13% Similarity=0.160 Sum_probs=115.2
Q ss_pred HHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCCCC------hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCC
Q 013811 73 AFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGSYN------EQMFKGLDFVIAEARKYGIKLILSLANNYDSFG 139 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~~~------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~g 139 (436)
.++.++++|+..||++. |.++ .|. +.+..|+.++ +...-.+|++++.|++.|+.+++.+.-. .|
T Consensus 56 ~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g---~~ 132 (502)
T 1qw9_A 56 VIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLG---TR 132 (502)
T ss_dssp HHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCS---SC
T ss_pred HHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCC---CC
Confidence 46778999999999963 3332 121 1223454332 1112367999999999999999998432 12
Q ss_pred ChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-CC-cEEEEEeecCCCCC---CCCChH
Q 013811 140 GKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-DP-TIMAWELMNEPRCT---SDPSGR 214 (436)
Q Consensus 140 g~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-~p-~I~~weL~NEp~~~---~~~~~~ 214 (436)
+......|..-... ..+ ..+..+-.+ ++. .| .|-.|+|+|||... ...+.+
T Consensus 133 ~~~~a~~~vey~n~---~~~-------------t~~~~lR~~--------~G~~ep~~v~yweiGNE~~g~w~~g~~t~~ 188 (502)
T 1qw9_A 133 GIDAARNLVEYCNH---PSG-------------SYYSDLRIA--------HGYKEPHKIKTWCLGNAMDGPWQIGHKTAV 188 (502)
T ss_dssp CHHHHHHHHHHHHC---CSS-------------SHHHHHHHH--------TTCCSCCCCCEEEESSCCCSTTSTTCCCHH
T ss_pred CHHHHHHHHHHhCC---CCC-------------CcHHHHHHH--------cCCCCCCCCeEEEEeCCCCCCcCCCCcCHH
Confidence 22222222211000 000 011222223 432 25 68899999999843 223567
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEe-CCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhH
Q 013811 215 TIQAWITEMASYVKSIDRNHLLEA-GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRD 293 (436)
Q Consensus 215 ~~~~w~~~~~~~Ir~~Dp~~lV~v-G~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~ 293 (436)
.+.+.+++.+++||+.||+..|.. |..+. ..+. .+.| -..+.. ...+.+||+++|.|+.... .+...
T Consensus 189 ~Y~~~~~~~a~aik~~dP~i~via~G~~~~---~~p~----~~~W--~~~~l~-~~~~~vD~is~H~Y~~~~~--~~~~~ 256 (502)
T 1qw9_A 189 EYGRIACEAAKVMKWVDPTIELVVCGSSNR---NMPT----FAEW--EATVLD-HTYDHVDYISLHQYYGNRD--NDTAN 256 (502)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSCT---TSTT----TTHH--HHHHHH-HHGGGCSEEEEEEEECCTT--CCHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeCCCcc---cCcc----cCch--HHHHHH-hcccCCCEEEEeeCCCCCC--CCHHH
Confidence 888999999999999999865542 32211 0110 0001 112222 2236899999999975321 11111
Q ss_pred ---hHHHHHHHHHHHHHHHH-----H--hcCCcEEEEecCCCC
Q 013811 294 ---QLSFLNNWLDTHIQDAE-----H--ILRKPILLAEFGKSR 326 (436)
Q Consensus 294 ---~~~~~~~~i~~~~~~a~-----~--~~~kPv~i~EfG~~~ 326 (436)
....+.+++..+.+... . ..+.||+|+|||...
T Consensus 257 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~l~i~E~n~~~ 299 (502)
T 1qw9_A 257 YLALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWY 299 (502)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECC
T ss_pred HHHhHHHHHHHHHHHHHHHHHhhhhcccCCCceEEEecccccc
Confidence 11223333433332222 1 134678999999763
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-07 Score=98.71 Aligned_cols=215 Identities=14% Similarity=0.154 Sum_probs=115.2
Q ss_pred HHHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCCCC------hhhhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 72 TAFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGSYN------EQMFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~~~------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
..++.++++|+..||++. |.++ .|. +.+.+|+.++ +...-.+|++++.|++.|+.+++.+... .
T Consensus 63 dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g---~ 139 (513)
T 2c7f_A 63 DVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLG---T 139 (513)
T ss_dssp HHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCS---S
T ss_pred HHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCC---C
Confidence 346778999999999963 4332 121 1223444322 1112267999999999999999998432 1
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-CC-cEEEEEeecCCCCCC---CCCh
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-DP-TIMAWELMNEPRCTS---DPSG 213 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-~p-~I~~weL~NEp~~~~---~~~~ 213 (436)
|+......|..-.-.+ .. ..+..+-.+ ++. .| .|-.|+|+|||.... ..+.
T Consensus 140 ~~~~~a~~~vey~n~~---~~-------------t~~~~lR~~--------~G~~ep~~vkyweiGNE~~g~w~~g~~t~ 195 (513)
T 2c7f_A 140 RGISDACNLLEYCNHP---GG-------------SKYSDMRIK--------HGVKEPHNIKVWCLGNAMDGPWQVGHKTM 195 (513)
T ss_dssp CCHHHHHHHHHHHHCC---SS-------------SHHHHHHHH--------TTCCSCCCCCEEEESCCCCCTTSTTCCCH
T ss_pred CCHHHHHHHHHHhCCC---CC-------------ChHHHHHHH--------cCCCCCCCceEEEeccCcccccccCCCCH
Confidence 2322222332110000 00 011222233 332 23 478999999998531 2356
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEE-eCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChh
Q 013811 214 RTIQAWITEMASYVKSIDRNHLLE-AGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDR 292 (436)
Q Consensus 214 ~~~~~w~~~~~~~Ir~~Dp~~lV~-vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~ 292 (436)
+.+.+.+++.+++||+.||+..|. .|..+. ..+. .+.| -..+.. ...+.+||+++|.|+..... +..
T Consensus 196 ~~Y~~~~~~~a~a~k~~dP~i~via~G~~~~---~~~~----~~~W--~~~~l~-~~~~~vD~is~H~Y~~~~~~--d~~ 263 (513)
T 2c7f_A 196 DEYGRIAEETARAMKMIDPSIELVACGSSSK---DMPT----FPQW--EATVLD-YAYDYVDYISLHQYYGNKEN--DTA 263 (513)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEECCCSCT---TSTT----TTHH--HHHHHH-HHTTTCCEEEEEEEECCTTC--CHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEeCCCCC---CCcc----cCch--HHHHHH-hcccCCCEEEEeecCCCCCC--CHH
Confidence 788889999999999999986544 333211 0110 0001 112222 23468999999999753211 111
Q ss_pred H---hHHHHHHHHHHHHHHHH---H----hcCCcEEEEecCCC
Q 013811 293 D---QLSFLNNWLDTHIQDAE---H----ILRKPILLAEFGKS 325 (436)
Q Consensus 293 ~---~~~~~~~~i~~~~~~a~---~----~~~kPv~i~EfG~~ 325 (436)
. ....+.+++.++.+... . ..+.||+++|||..
T Consensus 264 ~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~l~~~Ewn~~ 306 (513)
T 2c7f_A 264 DFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVW 306 (513)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEEC
T ss_pred HHHHhHhhHHHHHHHHHHHHHHHhhhhccCCCceEEEeccccc
Confidence 1 11222333433322111 1 13467899999975
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.9e-07 Score=97.50 Aligned_cols=217 Identities=16% Similarity=0.170 Sum_probs=116.1
Q ss_pred HHHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCCCC------hhhhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 72 TAFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGSYN------EQMFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~~~------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
..++.++++|+..||++. |.++ .|. +.+.+|+.++ +...-.+|++++.|++.|+.+++.+... .
T Consensus 95 Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G---~ 171 (574)
T 2y2w_A 95 DVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMG---T 171 (574)
T ss_dssp HHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCS---S
T ss_pred HHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCC---C
Confidence 346777999999999943 3332 121 1233455432 1122348999999999999999998432 2
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-CC-cEEEEEeecCCCCC---CCCCh
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-DP-TIMAWELMNEPRCT---SDPSG 213 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-~p-~I~~weL~NEp~~~---~~~~~ 213 (436)
|+......|..-...+ .. ..+..+-.+ ++. .| .|-.|+|+||+... ...+.
T Consensus 172 ~~~~ea~dwveY~n~~---~~-------------t~w~~lR~~--------~G~~ep~~vkyweIGNE~~g~W~~G~~t~ 227 (574)
T 2y2w_A 172 RGLKAALDELEYVNGA---PG-------------TAWADQRVA--------NGIEEPMDIKMWCIGNEMDGPWQVGHMSP 227 (574)
T ss_dssp CCHHHHHHHHHHHHCC---TT-------------SHHHHHHHH--------TTCCSCCCCCEEEESSCTTSTTSTTCCCH
T ss_pred CCHHHHHHHHHHhCCC---CC-------------ChHHHHHHH--------cCCCCCcceeEEEeccccccccccCCCCH
Confidence 3332222332110000 00 011122222 322 24 58899999999753 22356
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEE-eCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCCh-
Q 013811 214 RTIQAWITEMASYVKSIDRNHLLE-AGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSND- 291 (436)
Q Consensus 214 ~~~~~w~~~~~~~Ir~~Dp~~lV~-vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~- 291 (436)
+.+.+.+++.+++||+.||+..|. .|..+. ..+. .+.| -..+.. ...+.+||+++|.|+..++....+
T Consensus 228 e~Y~~~~~~~a~AiK~vdP~i~via~G~~~~---~~p~----~~~W--~~~~l~-~~~~~vD~vs~H~Y~~~~g~~~~~~ 297 (574)
T 2y2w_A 228 EEYAGAVDKVAHAMKLAESGLELVACGSSGA---YMPT----FGTW--EKTVLT-KAYENLDFVSCHAYYFDRGHKTRAA 297 (574)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEECCSCT---TSTT----TTHH--HHHHHH-HHGGGCCEEEEEEEECCTTTTTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecCCcc---cCcc----ccch--HHHHHH-hcccCCCEEEEeecCCCcccccccc
Confidence 788899999999999999986443 443221 0110 0001 111221 223579999999998654221111
Q ss_pred -h--H---hHHHHHHHHHHHHHHHHH-------hcCCcEEEEecCCC
Q 013811 292 -R--D---QLSFLNNWLDTHIQDAEH-------ILRKPILLAEFGKS 325 (436)
Q Consensus 292 -~--~---~~~~~~~~i~~~~~~a~~-------~~~kPv~i~EfG~~ 325 (436)
+ . ....+..+++.+.+.... ..+.||+++|||..
T Consensus 298 ~d~~~~l~~~~~~d~~i~~~~~~~d~~~~~~~~~~~v~l~v~Ewn~~ 344 (574)
T 2y2w_A 298 ASMQDFLASSEDMTKFIATVSDAADQAREANNGTKDIALSFDEWGVW 344 (574)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCSCCEEEEEEEEEC
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHHHHHhhhhcCCccccEEEeccccc
Confidence 0 0 112223344433322221 02456899999975
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.64 E-value=6.1e-07 Score=91.96 Aligned_cols=243 Identities=16% Similarity=0.129 Sum_probs=130.3
Q ss_pred HHHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCCCC------hhhhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 72 TAFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGSYN------EQMFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~~~------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
..++.+++++..+||++. |.++ .|. +.+.+|+..+ +..-=.+|++++.|++.|..+++.+... .
T Consensus 72 dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~fG~~Ef~~~~e~~gaep~~~vN~G---~ 148 (504)
T 3ug3_A 72 DVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRFGTDEFIEYCREIGAEPYISINMG---T 148 (504)
T ss_dssp HHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEECCCS---S
T ss_pred HHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCCCHHHHHHHHHHhCCeEEEEEECC---C
Confidence 346778999999999964 2222 121 2233444322 1111258999999999999999987432 1
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccc---cccC-CCC-cEEEEEeecCCCCCC---C
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTG---IHYK-DDP-TIMAWELMNEPRCTS---D 210 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg---~~yk-~~p-~I~~weL~NEp~~~~---~ 210 (436)
|+...- .++++.+.....+.=| .+.+ ..| .|-.|+|+||+.... .
T Consensus 149 g~~~ea---------------------------~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~ 201 (504)
T 3ug3_A 149 GTLDEA---------------------------LHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGH 201 (504)
T ss_dssp CCHHHH---------------------------HHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTC
T ss_pred CCHHHH---------------------------HHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccC
Confidence 222111 1222222211000000 0011 112 588999999997532 2
Q ss_pred CChHHHHHHHHHHHHHhhccCCCCEEEe-CCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCC
Q 013811 211 PSGRTIQAWITEMASYVKSIDRNHLLEA-GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSS 289 (436)
Q Consensus 211 ~~~~~~~~w~~~~~~~Ir~~Dp~~lV~v-G~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~ 289 (436)
.+.+.+.+.+++.+++||+.||+..|.. |..+ + .|. ..+.. .....+|++++|+|...-
T Consensus 202 ~t~e~Y~~~~~~~a~Aik~~dP~I~lia~G~~~------~-------~W~--~~~l~-~~~~~vD~vs~H~Y~~~~---- 261 (504)
T 3ug3_A 202 MTADEYARAAKEYTKWMKVFDPTIKAIAVGCDD------P-------IWN--LRVLQ-EAGDVIDFISYHFYTGSD---- 261 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSC------H-------HHH--HHHHH-HHTTTCSEEEEEEEECCS----
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCcEEEEECCCC------c-------chh--HHHHH-hcccCCCEEEEeeCCCcH----
Confidence 3567888889999999999999865432 2211 1 110 11222 224689999999997531
Q ss_pred ChhHhHHHHHHHHHHHHH----HH-----HHhcCCcEEEEecCCCCCC-CCC---ChHHHHHHHHHHHHHHHHHhhcCCC
Q 013811 290 NDRDQLSFLNNWLDTHIQ----DA-----EHILRKPILLAEFGKSRKD-PGY---STYQRDVMFNTVYYKIYSSAKRGGA 356 (436)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~----~a-----~~~~~kPv~i~EfG~~~~~-~g~---~~~~r~~~~~~~~~~i~~~~~~~~~ 356 (436)
.+-. ...+.++++.+.. .+ .+..+.+|+++||+..... ++. .-.-++......+=. ...+....
T Consensus 262 ~~l~-~~~~d~~i~~~~~~vr~~~d~~~~~~~~~i~i~vdEwn~w~~~~~~~l~~~~t~~dAl~~A~~L~--~~~r~~D~ 338 (504)
T 3ug3_A 262 DYYE-TVSTVYLLKERLIGVKKLIDMVDTARKRGVKIALDEWNVWYRVSDNKLEEPYDLKDGIFACGVLV--LLQKMSDI 338 (504)
T ss_dssp SHHH-HHTHHHHHHHHHHHHHHHHHTSHHHHHHTCEEEEEEEEECCSCCSSSCCCCCCHHHHHHHHHHHH--HHHHHTTT
T ss_pred HHHh-hccHHHHHHHHHHHHHHHHHHhhhhcCCCCceEeeccccccccCCccccccCCHHHHHHHHHHHH--HHHhccCc
Confidence 1111 1223344544433 11 1112468999999986432 110 012344443332211 22233456
Q ss_pred ccceeeccccc
Q 013811 357 AAGGLFWQLLT 367 (436)
Q Consensus 357 ~~G~~~W~~~~ 367 (436)
+..+.+|++..
T Consensus 339 V~mA~~A~lvN 349 (504)
T 3ug3_A 339 VPLANLAQLVN 349 (504)
T ss_dssp CCEEEESCSBS
T ss_pred eeEEehhhhhc
Confidence 78899999854
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.56 E-value=6.5e-06 Score=84.90 Aligned_cols=212 Identities=13% Similarity=0.172 Sum_probs=112.8
Q ss_pred HHHHHHHHCCCCEEEEcc--ccCC-CCC----CCccCCCCCCh-------hhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 72 TAFHEAASHGLTVARTWA--FSDG-GYR----PLQRSPGSYNE-------QMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~--~~d~-~~~----~lq~~pg~~~~-------~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
..++.+|++|+.+||++. |.+. .|. +.+.+|+.++. ..-=.+|++++.|++.|..+++.+...
T Consensus 55 dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~g--- 131 (496)
T 2vrq_A 55 DVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFGTHEFMMLCELLGCEPYISGNVG--- 131 (496)
T ss_dssp HHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECCS---
T ss_pred HHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCccCHHHHHHHHHHcCCeEEEEEECC---
Confidence 446778999999999965 3331 121 22335554431 111146999999999999999998432
Q ss_pred CCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC---cEEEEEeecCCCCC-CCCCh
Q 013811 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP---TIMAWELMNEPRCT-SDPSG 213 (436)
Q Consensus 138 ~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p---~I~~weL~NEp~~~-~~~~~ 213 (436)
.|+...-..|..-... ..+ + .+..+-.+ + .|| .|-.|+|+||+... ...+.
T Consensus 132 ~g~~~ea~d~veY~n~---~~~----t---------~w~~lRa~--------~-G~~eP~~vkyweiGNE~~g~~g~~~~ 186 (496)
T 2vrq_A 132 SGTVQEMSEWVEYITF---DGE----S---------PMANWRRE--------N-GREKPWRIKYWGVGNQNWGCGGNMRA 186 (496)
T ss_dssp SCCHHHHHHHHHHHHC---CSB----S---------HHHHHHHH--------T-TCCSCCCCCEEEECSCTTTTTTCCCH
T ss_pred CCcHHHHHHHHHHhCC---CCC----C---------hHHHHHHH--------c-CCCCCCCceEEEEcCcccccCCCCCH
Confidence 2332222233221000 000 0 11112111 2 222 38899999999753 22346
Q ss_pred HHHHHHHHHHHHHhhcc-CCCCEEE-eCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCC--CCCCCC-
Q 013811 214 RTIQAWITEMASYVKSI-DRNHLLE-AGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYP--DQWLSS- 288 (436)
Q Consensus 214 ~~~~~w~~~~~~~Ir~~-Dp~~lV~-vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~--~~w~~~- 288 (436)
+.+.+.+++.+++||+. ||+..|. .|..+. .. .| -..+.. .....+|++++|.|+ +.|...
T Consensus 187 ~~Y~~~~~~~a~a~k~~~dp~i~~ia~G~~~~----~~-------~W--~~~~l~-~~~~~~D~vs~H~Y~~~~~~~~~~ 252 (496)
T 2vrq_A 187 EYYADLYRQFQTYLRNYGDNKLHKIACGANTA----DY-------HW--TEVLMK-QAAPFMHGLSLHYYTVPGPWEKKG 252 (496)
T ss_dssp HHHHHHHHHHHHTCCCCTTCCCEEEEEEEETT----CH-------HH--HHHHHH-HHGGGCSEEEEEEEECSSCGGGCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCC----Cc-------ch--HHHHHH-hCCCCCCEEEEeecCCCCcccccC
Confidence 77888889999999999 8865443 232110 00 01 011222 123469999999994 435311
Q ss_pred --CCh-hH-------hHHHHHHHHHHHHHHHHH---hcCCcEEEEecCCC
Q 013811 289 --SND-RD-------QLSFLNNWLDTHIQDAEH---ILRKPILLAEFGKS 325 (436)
Q Consensus 289 --~~~-~~-------~~~~~~~~i~~~~~~a~~---~~~kPv~i~EfG~~ 325 (436)
..+ +. ....+.+.|..+.+...+ ..+.+++++|||..
T Consensus 253 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~d~~~~~~~~~l~~~E~~~w 302 (496)
T 2vrq_A 253 PATGFTTDEWWVTLKKALFMDRLVTKHSAIMDVYDPDKRIDLIVDEWGTW 302 (496)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEEEEEC
T ss_pred cccccchHHHHHHHhhhhhHHHHHHHHHHHHhhhCcCCCCcEEEECceec
Confidence 111 10 011223344444333222 12467999999975
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=98.53 E-value=7.2e-07 Score=87.36 Aligned_cols=246 Identities=13% Similarity=0.183 Sum_probs=134.3
Q ss_pred HCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCC
Q 013811 79 SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSD 158 (436)
Q Consensus 79 ~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~ 158 (436)
...+|.+-. =++-.|..++|.+|.|+ |...|.+++.|+++||.|---.. -|.. +.|.|....... ...
T Consensus 35 ~~~Fn~it~--EN~mKw~~~ep~~G~~~---f~~aD~~v~~a~~ngi~vrGHtL-vWh~-----q~P~W~~~~~d~-~g~ 102 (341)
T 3ro8_A 35 KMHHDVVTA--GNAMKPDALQPTKGNFT---FTAADAMIDKVLAEGMKMHGHVL-VWHQ-----QSPAWLNTKKDD-NNN 102 (341)
T ss_dssp HHHCSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCGGGTEEECT-TSC
T ss_pred HHhCCEEEE--CcccchhHhcCCCCccc---hHHHHHHHHHHHhCCCEEEeccc-cCcc-----cCCHHHhccCcc-ccc
Confidence 445888875 12334667899999999 88899999999999999842110 1422 346776431000 000
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCC---------hHHH-----HHHHHHHH
Q 013811 159 DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPS---------GRTI-----QAWITEMA 224 (436)
Q Consensus 159 ~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~---------~~~~-----~~w~~~~~ 224 (436)
....+.+++++.++++++.+++| |++ .|.+|++.||+-...... ...+ ..|+..+.
T Consensus 103 ~~~~s~~~l~~~~~~hI~~vv~r--------Ykg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF 172 (341)
T 3ro8_A 103 TVPLGRDEALDNLRTHIQTVMKH--------FGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAF 172 (341)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHH--------HGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHH--------cCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHH
Confidence 00134456788999999999999 997 578999999996432100 0011 13566677
Q ss_pred HHhhcc-----CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC---------CCCcceEEe--ecCCCCCCCC
Q 013811 225 SYVKSI-----DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL---------IPGIDFATV--HSYPDQWLSS 288 (436)
Q Consensus 225 ~~Ir~~-----Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~---------~~~iD~~s~--H~Y~~~w~~~ 288 (436)
++.|+. ||+..+.+.. |+...+.. . ..-..+++.+. .-.||=+++ |.-...
T Consensus 173 ~~Ar~a~~~~pdp~akL~~ND---Yn~~~~~k---~---~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~~---- 239 (341)
T 3ro8_A 173 LAAREVLDENPSWNIKLYYND---YNEDNQNK---A---TAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNINT---- 239 (341)
T ss_dssp HHHHHHHHHSTTCCCEEEEEE---SCTTSHHH---H---HHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETTC----
T ss_pred HHHHHhcccCCCCCcEEEEec---CCCcccch---H---HHHHHHHHHHHHhhhcccCCCCccceeeechhccCCC----
Confidence 777776 6676655432 22211000 0 00001111111 234775544 543221
Q ss_pred CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC-CCh---HHHHHHHHHHHHHHHHHhhcCCCccceeecc
Q 013811 289 SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG-YST---YQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364 (436)
Q Consensus 289 ~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g-~~~---~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~ 364 (436)
+. ..+.+.++.... ++.||.|||+-+...... .++ ..++..|+.++..+.+.. ..+.|.++|.
T Consensus 240 -~~--------~~~~~~l~~~a~-lGl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~---~~v~giT~WG 306 (341)
T 3ro8_A 240 -NP--------DNVKLSLEKFIS-LGVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHA---DHIARVTFWG 306 (341)
T ss_dssp -CH--------HHHHHHHHHHHT-TTCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTG---GGEEEEEEC-
T ss_pred -CH--------HHHHHHHHHHHH-cCCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc---CCceEEEEeC
Confidence 11 123444444454 899999999988653211 111 235566677776655432 2467999999
Q ss_pred cccCCCCCCC
Q 013811 365 LLTEGMDAFR 374 (436)
Q Consensus 365 ~~~~g~~~~~ 374 (436)
+.|. .+|.
T Consensus 307 ~~D~--~sW~ 314 (341)
T 3ro8_A 307 MDDN--TSWR 314 (341)
T ss_dssp ----------
T ss_pred CCCC--CccC
Confidence 9986 3464
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=98.53 E-value=1e-05 Score=75.91 Aligned_cols=171 Identities=14% Similarity=0.107 Sum_probs=111.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-----ccCCCCCCC--------c---cCCCCCChhhhhhHHHHHHHHHHcCCEEEEe
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-----FSDGGYRPL--------Q---RSPGSYNEQMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-----~~d~~~~~l--------q---~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
.+++++.|+.+.+.|.|+|||=+ |.+. ..+ | ..||.+.-+.-..|-.+++.|++||++||++
T Consensus 36 f~DLD~afdEavERGYNTVRIcAmP~LLf~~p--~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLS 113 (393)
T 3gyc_A 36 YEDWDQVLDELSERGYNAIRIDAYPHLIAENP--MKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLS 113 (393)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEECCHHHHHHCT--TCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHcCCCeEEeccccceeecCC--cchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEe
Confidence 47899999999999999999922 2221 112 2 3444333355678899999999999999997
Q ss_pred cccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChH-HHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC
Q 013811 131 LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPV-VKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209 (436)
Q Consensus 131 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~-~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~ 209 (436)
=. +-++ +. .....-..+. .-+.+.+.++.|..+ +-..+|...||.||-....
T Consensus 114 SW-YQQs-------ps----------eal~a~~R~e~lA~aw~~lLdfi~~~---------GL~drIAyVELhNEv~~~~ 166 (393)
T 3gyc_A 114 SW-YRLD-------VD----------EVCLKLDTPEKLADCWLTILRSIEED---------GLLDTILYVDLCNEWPGDS 166 (393)
T ss_dssp CC-CCCB-------TT----------CGGGGCCSHHHHHHHHHHHHHHHHHT---------TCGGGEEEEESSTTTTCTT
T ss_pred hh-hhcC-------HH----------HHHhhhccHHHHHHHHHHHHHHHHHc---------cchhceeeEeeeccccCcc
Confidence 42 1010 00 0011112233 345556666665554 4456899999999987643
Q ss_pred CC---------------ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcc
Q 013811 210 DP---------------SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGID 274 (436)
Q Consensus 210 ~~---------------~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD 274 (436)
-. ..+.+..|+++..+++|+.-|+.+|+... ..... ..| +....+.+|
T Consensus 167 la~~~~~~~~~vg~~a~~~e~l~~~lee~v~~lR~~hP~lpvt~Sy----T~~~~------------~~~-~~~d~sfld 229 (393)
T 3gyc_A 167 WAPFFAKTYPNVGWGNWYKEESLRWMKTSLEKMRQVYPDMPFLYSF----DHGDV------------KKY-EEVDCSFLD 229 (393)
T ss_dssp TCHHHHTTCTTTCTTCTTSHHHHHHHHHHHHHHHTTCTTSCEECCB----CCSCT------------THH-HHSCCTTCS
T ss_pred cccccCccccccccchhhhHhhhHHHHHHHHHHHHhCCCCeeeeee----ccchh------------hhh-hccCchHHh
Confidence 21 23589999999999999999999998643 11110 012 223457799
Q ss_pred eEEeecCCC
Q 013811 275 FATVHSYPD 283 (436)
Q Consensus 275 ~~s~H~Y~~ 283 (436)
|+.+|.+.+
T Consensus 230 fle~h~wm~ 238 (393)
T 3gyc_A 230 LYEHHIWMA 238 (393)
T ss_dssp SEEBCCCGG
T ss_pred hhhhHHHhh
Confidence 999999864
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=98.51 E-value=2.3e-06 Score=82.75 Aligned_cols=236 Identities=11% Similarity=0.131 Sum_probs=129.7
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+..+.+|+.|++.||++.- | -.++.+++..||+|++.+.+. .. .
T Consensus 19 ~Vv~llks~gi~~VRlY~~---------------D-------~~vL~Al~~sgi~V~lGV~n~--~l---~--------- 62 (323)
T 3ur8_A 19 DVIKLYNANNIKKMRIYYP---------------H-------TNVFNALKGSNIEIILDVPNQ--DL---E--------- 62 (323)
T ss_dssp HHHHHHHHTTCCEEEESSC---------------C-------HHHHHHHTTCCCEEEEEECGG--GT---G---------
T ss_pred HHHHHHHhCCCCeEEecCC---------------C-------HHHHHHHHhcCCeEEEecccc--ch---h---------
Confidence 3445667899999999421 2 267888899999999998653 10 0
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC--ChHHHHHHHHHHHHHhhc
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--SGRTIQAWITEMASYVKS 229 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--~~~~~~~w~~~~~~~Ir~ 229 (436)
. ..+ ++.-.++++.-+.. |.....|....++||.-..... ....+...++.+.+++++
T Consensus 63 --------~-la~---~~~A~~WV~~nV~~--------y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~ 122 (323)
T 3ur8_A 63 --------A-LAN---PSNANGWVQDNIRN--------HFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSS 122 (323)
T ss_dssp --------G-GGS---HHHHHHHHHHHTGG--------GTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHH
T ss_pred --------h-hhh---HHHHHHHHHHHHhh--------hCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHH
Confidence 0 111 33445567777766 7666789999999999765421 245677777888888887
Q ss_pred cCC--CCEEEeCCC-cccCCCCC-ccccCCCCC----cccchhhhhcCCCCcceEEeecCCCCCCC---CCChhHh----
Q 013811 230 IDR--NHLLEAGLE-GFYGQSTP-QRKRVNPNL----DIGTDFVANNLIPGIDFATVHSYPDQWLS---SSNDRDQ---- 294 (436)
Q Consensus 230 ~Dp--~~lV~vG~~-g~~~~~~~-~~~~~np~~----~~g~df~~~~~~~~iD~~s~H~Y~~~w~~---~~~~~~~---- 294 (436)
..- +..|++... +.+..+.| ..-.+.|.+ ..-.+|. ....|++.+|.||. |.. ....+-.
T Consensus 123 aGl~~~IkVsT~~~~~v~~~s~pPS~g~F~~~~~~~~~pil~fL----~~~~sp~~vN~yPy-f~~~~~~~~i~l~yAlf 197 (323)
T 3ur8_A 123 AGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSFINPIIGFL----ARHNLPLLANIYPY-FGHIDNTNAVPLSYALF 197 (323)
T ss_dssp TTCTTTSEEEEEEEGGGEECCSSGGGCEECGGGHHHHHHHHHHH----HHTTCCEEEECCHH-HHHHHCTTTSCHHHHHT
T ss_pred CCCCCCceeeeeeeccccccCCCCCcceechhHHHHHHHHHHHH----HhcCCeeEEecchh-hhhccCCCCCChhhhcc
Confidence 543 456776432 22222211 110111100 0000111 23567789999984 221 0000000
Q ss_pred ----------HHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHH---hhcCCCcc
Q 013811 295 ----------LSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSS---AKRGGAAA 358 (436)
Q Consensus 295 ----------~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~i~~~---~~~~~~~~ 358 (436)
...+..-++.....-++ ..+|||+|+|.|.++.+ .+.+.+....|++.+...+... .++.+...
T Consensus 198 ~~~~d~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~vsEtGWPs~G~~~as~~na~~y~~~li~~~~~~~GtP~rp~~~~ 277 (323)
T 3ur8_A 198 NQQRRNDTGYQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTI 277 (323)
T ss_dssp CCSSCCTTSCSSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCCSSSBTTBCHHHHHHHHHHHHHHHHHTCBCSSSBTCCC
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHcCCCCceEEeccccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 01122222222111111 24799999999999875 3356777888888777654321 00101123
Q ss_pred ceeecccccC
Q 013811 359 GGLFWQLLTE 368 (436)
Q Consensus 359 G~~~W~~~~~ 368 (436)
..++..+.|+
T Consensus 278 ~~y~F~lfde 287 (323)
T 3ur8_A 278 ETYLFAMFDE 287 (323)
T ss_dssp CEEEECSBCC
T ss_pred eEEEEEeecC
Confidence 4566677765
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.49 E-value=3e-05 Score=80.22 Aligned_cols=144 Identities=10% Similarity=0.122 Sum_probs=88.2
Q ss_pred HHCCCCEEEEccccC----CCCCCC----------ccCCCCCChhhhhhHHHHHHHHHHcCCE-EEEecccCCCCCCChh
Q 013811 78 ASHGLTVARTWAFSD----GGYRPL----------QRSPGSYNEQMFKGLDFVIAEARKYGIK-LILSLANNYDSFGGKK 142 (436)
Q Consensus 78 ~~~G~N~vRi~~~~d----~~~~~l----------q~~pg~~~~~~l~~lD~~i~~a~~~Gi~-vil~l~~~w~~~gg~~ 142 (436)
+.+|++.+|+.+-+. +.|... ...++.||.+.-.....++.+|+++|.. ++... |..
T Consensus 61 ~Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A~~~~~~~i~asp---WSp----- 132 (507)
T 3clw_A 61 IGMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFT---NSA----- 132 (507)
T ss_dssp CSCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHHHHTTCCCEEEEC---SSC-----
T ss_pred CCceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHHHHcCCCeEEEeC---CCC-----
Confidence 468999999976321 111111 1123455543223356799999999884 43332 432
Q ss_pred hhhhHHhhcCCCCCC-CCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCC--CCC------CC-C
Q 013811 143 QYVNWARSQGQFLTS-DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEP--RCT------SD-P 211 (436)
Q Consensus 143 ~y~~W~~~~G~~~~~-~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp--~~~------~~-~ 211 (436)
|.|++..|..... .....-.++..+.|.+|+..+++. |+.+ =.|-++.+.||| ... ++ .
T Consensus 133 --P~wMk~ng~~~~~~g~~~~L~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~~~~es~~~ 202 (507)
T 3clw_A 133 --PYFMTRSASTVSTDQDCINLQNDKFDDFARFLVKSAQH--------FREQGFHVNYISPNNEPNGQWHANSFQEGSFA 202 (507)
T ss_dssp --CGGGSSSSSSSCCCSSSCSSCTTCHHHHHHHHHHHHHH--------HHHTTCCEEEEECCSCTTSCGGGCCSSCCCCC
T ss_pred --cHHhccCCCccCCCCccccCChHHHHHHHHHHHHHHHH--------HHHcCCceeEeeeecCCccccccCCCcCCCCC
Confidence 4566544321110 011112466788899999999998 8755 236677789999 432 11 2
Q ss_pred ChHHHHHHHHHHHHHhhccCCCCEEEeC
Q 013811 212 SGRTIQAWITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 212 ~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG 239 (436)
+++...+|++.+..++++..++.-|.++
T Consensus 203 t~~~~a~fik~L~p~l~~~g~~~kI~~~ 230 (507)
T 3clw_A 203 TKADLYRMVEELDKAISEAQIDTKILIP 230 (507)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 5678899999999999998886666655
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=9.3e-06 Score=83.53 Aligned_cols=202 Identities=16% Similarity=0.099 Sum_probs=111.6
Q ss_pred HHHHHHHHHCCC-CEEEEccc--cCC-CCC----CCccCCC-CCCh---------h--hhhhHHHHHHHHHHcCCEEEEe
Q 013811 71 STAFHEAASHGL-TVARTWAF--SDG-GYR----PLQRSPG-SYNE---------Q--MFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 71 ~~~l~~l~~~G~-N~vRi~~~--~d~-~~~----~lq~~pg-~~~~---------~--~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
...++.+|+++. -.||+ .- .|. .|. +.+.+|- .+++ . .-..+|++++.|++-|..+++.
T Consensus 60 ~~v~~l~k~L~~~~~lR~-GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~ 138 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRI-GGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYG 138 (488)
T ss_dssp HHHHHHHHHHCSSCEEEE-ESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHhCCCeEEEe-CccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEE
Confidence 457788899999 99999 42 111 011 1111111 0111 0 1134899999999999999998
Q ss_pred cccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCC--
Q 013811 131 LANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCT-- 208 (436)
Q Consensus 131 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~-- 208 (436)
|.- |. .+++ ...+.++.+... -+. -.|..|||+|||...
T Consensus 139 lN~-----g~----------------------~~~~---~a~~~v~y~~~~--------~~~-~~l~~welGNEpd~~~~ 179 (488)
T 3vny_A 139 LNL-----GK----------------------GTPE---NAADEAAYVMET--------IGA-DRLLAFQLGNEPDLFYR 179 (488)
T ss_dssp ECT-----TT----------------------SCHH---HHHHHHHHHHHH--------HCT-TTEEEEEESSCGGGHHH
T ss_pred EeC-----CC----------------------CCHH---HHHHHHHHHhhc--------ccC-CceeEEEecCccccccc
Confidence 732 10 0121 123334433331 011 268999999999732
Q ss_pred -----CCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCC
Q 013811 209 -----SDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPD 283 (436)
Q Consensus 209 -----~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~ 283 (436)
...+.+.+.+-+++.+++||+.||+..+ +|..... . +.| -..|.. .....+|++|.|+|+.
T Consensus 180 ~G~~~~~~t~~~Y~~~~~~~a~a~k~~~p~~~l-~gp~~~~---~-------~~w--~~~~l~-~~~~~vd~vS~H~Y~~ 245 (488)
T 3vny_A 180 NGIRPASYDFAAYAGDWQRFFTAIRKRVPNAPF-AGPDTAY---N-------TKW--LVPFAD-KFKHDVKFISSHYYAE 245 (488)
T ss_dssp HSSSCTTCCHHHHHHHHHHHHHHHHHHCTTCCE-EEEEESS---C-------GGG--HHHHHH-HTGGGCSEEEEEEEEE
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHhhCCCCeE-EeCCCCC---C-------chh--hHHHHH-hcCccCCEEEEeeCCC
Confidence 1224566777778899999999997654 2321111 0 111 122332 2346799999999985
Q ss_pred CCC--CCCChhHhH---HHHHHHHHHHHHHHHHhcCCcEEEEecCCCCC
Q 013811 284 QWL--SSSNDRDQL---SFLNNWLDTHIQDAEHILRKPILLAEFGKSRK 327 (436)
Q Consensus 284 ~w~--~~~~~~~~~---~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~ 327 (436)
.-. +..+.+.-+ ..+.+++....+.+.. .++|++|+|++-...
T Consensus 246 g~~~~~~~t~~~ll~~~~~l~~~~~~~~~~~~~-~g~p~~lgEtnsa~~ 293 (488)
T 3vny_A 246 GPPTDPSMTIERLMKPNPRLLGETAGLKQVEAD-TGLPFRLTETNSCYQ 293 (488)
T ss_dssp CCTTCTTCCHHHHTSCCHHHHHHHHHHHHHHHH-HCCCEEEEEEEEEST
T ss_pred CCCCCCCcCHHHHcCchHHHHHHHHHHHHHHhc-CCCCEEEeccccCCC
Confidence 311 111111111 1233344443333444 799999999997644
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=84.90 Aligned_cols=209 Identities=14% Similarity=0.158 Sum_probs=117.1
Q ss_pred HHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcC
Q 013811 73 AFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQG 152 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G 152 (436)
.++.+++.|++.||++.- |+ .++.+++..||+|++.+.+. . . ..-+
T Consensus 18 vv~llk~~~i~~vRlY~~---------------d~-------~vl~A~~~tgi~v~lgv~n~--~---~---~~~a---- 63 (312)
T 2cyg_A 18 VVSLYKSNNIARMRLYDP---------------NQ-------AALQALRNSNIQVLLDVPRS--D---V---QSLA---- 63 (312)
T ss_dssp HHHHHHHTTCCEEEESSC---------------CH-------HHHHHHTTSCCEEEEEECHH--H---H---HHHH----
T ss_pred HHHHHHhcCCCEEEEcCC---------------CH-------HHHHHHHhcCCEEEEecccc--c---h---hhhh----
Confidence 377889999999999421 22 67788889999999998642 0 0 0000
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 153 QFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 153 ~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
.+ ++....+++.-+.. |.....|....++||+-. .+.....+...++.+.+++++..-
T Consensus 64 ----------~~---~~~a~~Wv~~nv~~--------y~~~~~i~~I~VGNEvl~-~~~~~~~L~~am~~v~~aL~~~gl 121 (312)
T 2cyg_A 64 ----------SN---PSAAGDWIRRNVVA--------YWPSVSFRYIAVGNELIP-GSDLAQYILPAMRNIYNALSSAGL 121 (312)
T ss_dssp ----------HC---TTHHHHHHHHHTGG--------GTTTSEEEEEEEEESCTT-TSTTGGGHHHHHHHHHHHHHHTTC
T ss_pred ----------hC---HHHHHHHHHHHHHh--------hCCCceEEEEEecccccc-CCCCHHHHHHHHHHHHHHHHhCCC
Confidence 01 12233455555555 655567999999999976 333456788888999999987543
Q ss_pred --CCEEEeCCC-cccCCCCCccccCCCC---CcccchhhhhcCCCCcc-------eEEeecCCCCCCCC---CC------
Q 013811 233 --NHLLEAGLE-GFYGQSTPQRKRVNPN---LDIGTDFVANNLIPGID-------FATVHSYPDQWLSS---SN------ 290 (436)
Q Consensus 233 --~~lV~vG~~-g~~~~~~~~~~~~np~---~~~g~df~~~~~~~~iD-------~~s~H~Y~~~w~~~---~~------ 290 (436)
...|++... ..+..+. .|. +. .|.. ....+-+| ++.+|.||. |... ..
T Consensus 122 ~~~ikVst~~~~~~~~~s~------pPS~g~f~--~~~~-~~~~p~l~fl~~~~sp~~vN~yPy-f~~~~~p~~i~l~ya 191 (312)
T 2cyg_A 122 QNQIKVSTAVDTGVLGTSY------PPSAGAFS--SAAQ-AYLSPIVQFLASNGAPLLVNVYPY-FSYTGNPGQISLPYA 191 (312)
T ss_dssp TTTSEEEEEEEGGGBSCCS------SGGGCCBC--HHHH-HHHHHHHHHHHHHTCCEEEECCHH-HHHHHSTTTSCHHHH
T ss_pred CCCeEEEeCCchhhcccCC------CCCccccc--chHH-HHHHHHHHHHHhcCCcceeccCch-hhccCCCCCccchhh
Confidence 356665431 2232221 121 11 0110 01123344 449999984 2210 00
Q ss_pred --------hhH-h---HHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCC--CCCChHHHHHHHHHHHHHH
Q 013811 291 --------DRD-Q---LSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKD--PGYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 291 --------~~~-~---~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~--~g~~~~~r~~~~~~~~~~i 347 (436)
... . ..++..-++......++ ..+|||+|+|.|.++.+ .+.+.+....|++.+...+
T Consensus 192 lf~~~~~~v~d~~~~y~n~fda~~Dav~~al~~~g~~~~~ivVsEtGWPS~G~~~~as~~na~~y~~~li~~~ 264 (312)
T 2cyg_A 192 LFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWPSAGGGAEASTSNAQTYNQNLIRHV 264 (312)
T ss_dssp HTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCCSSSSSTTSSHHHHHHHHHHHHHHG
T ss_pred hccCCCceeccccccchhhHHHHHHHHHHHHHHhCCCCCeEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 000 0 01122112222211122 13799999999999875 2456677777777666543
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.1e-05 Score=80.58 Aligned_cols=213 Identities=14% Similarity=0.154 Sum_probs=116.8
Q ss_pred CCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDD 159 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 159 (436)
+|++.+|+.+.++. ..|+ .-..++.+|.++|++++... |.. |.|++..|... ...
T Consensus 45 ~g~s~~R~~ig~~~---------~~~~-----~~~~~~k~A~~~~~~i~asp---WSp-------P~wMk~n~~~~-~~g 99 (383)
T 2y24_A 45 IGLSIMRVRIDPDS---------SKWN-----IQLPSARQAVSLGAKIMATP---WSP-------PAYMKSNNSLI-NGG 99 (383)
T ss_dssp CCCCEEEEEECSSG---------GGGG-----GGHHHHHHHHHTTCEEEEEE---SCC-------CGGGBTTSSSB-SCC
T ss_pred ccceEEEEecCCcc---------cccc-----cchHHHHHHHhcCCeEEEec---CCC-------cHHHhCCCCCC-CCC
Confidence 89999999653210 0122 22467889999999887764 432 45665433211 011
Q ss_pred CCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC-----CChHHHHHHHHHHHHHhhccCCC
Q 013811 160 DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD-----PSGRTIQAWITEMASYVKSIDRN 233 (436)
Q Consensus 160 ~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~-----~~~~~~~~w~~~~~~~Ir~~Dp~ 233 (436)
. -.++..+.|.+|+..+++. |+++ =.|-+..+.|||..... .+++...+|++.....+++ .
T Consensus 100 ~--L~~~~~~~yA~Yl~k~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~~---~ 166 (383)
T 2y24_A 100 R--LLPANYSAYTSHLLDFSKY--------MQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFGS---L 166 (383)
T ss_dssp B--BCGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGSTT---S
T ss_pred c--CCHHHHHHHHHHHHHHHHH--------HHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhcC---C
Confidence 1 1466788899999999988 8765 23667889999987532 1355666666654333322 2
Q ss_pred CEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhc
Q 013811 234 HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHIL 313 (436)
Q Consensus 234 ~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~ 313 (436)
-|..+....|. +.|.. .-+....+.+.+|.+++|.|+... ...+ .+.. .
T Consensus 167 -kI~~~d~~~~d----------~~~~~-~~l~d~~a~~~v~~i~~H~Y~~~~---~~~~---------------~~~~-~ 215 (383)
T 2y24_A 167 -KVIVAESLGFN----------PALTD-PVLKDSDASKYVSIIGGHLYGTTP---KPYP---------------LAQN-A 215 (383)
T ss_dssp -EEEEEEETTCC----------GGGTH-HHHTCHHHHTTCCEEEEECTTSCC---CCCH---------------HHHH-T
T ss_pred -EEEeecccccc----------hhcch-hhccCHhHHhhccEEEEecCCCCc---ccch---------------hhhc-C
Confidence 23332211111 10100 001011245789999999997632 1111 1122 7
Q ss_pred CCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 314 RKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 314 ~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
+|+++++|.+..... +...-.+...+ ...|...+.. ...++++|.+.+
T Consensus 216 ~k~lw~TE~~~~~~~-~~~~w~~~~~~---a~~i~~~l~~--~~~~~~~W~~~~ 263 (383)
T 2y24_A 216 GKQLWMTEHYVDSKQ-SANNWTSAIEV---GTELNASMVS--NYSAYVWWYIRR 263 (383)
T ss_dssp TCEEEEEEECSCTTS-CTTCHHHHHHH---HHHHHHHHHT--TCSEEEEEESBS
T ss_pred CCeEEEeccccCCCc-ccCchhHHHHH---HHHHHHHHhc--CccEEEEeeccC
Confidence 999999998854221 01111122222 2233344443 467999999965
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.8e-06 Score=79.58 Aligned_cols=163 Identities=16% Similarity=0.140 Sum_probs=106.0
Q ss_pred CCeEEEEEeecccccccc-cCCcchhhhHHHHHHHHHHCCCCEEEE-ccccCC--CCCC-CccCCCCCChhhhhhHHHHH
Q 013811 43 NGNLYFANGFNAYWLMYV-ASDPSQRSKVSTAFHEAASHGLTVART-WAFSDG--GYRP-LQRSPGSYNEQMFKGLDFVI 117 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~-~~~~~~~~~~~~~l~~l~~~G~N~vRi-~~~~d~--~~~~-lq~~pg~~~~~~l~~lD~~i 117 (436)
.+.+..+.|+-.-..... ...-++.+.++++|+.||++|++.|=+ +.+-++ -|+. +....+.+.+ ..+.|+.++
T Consensus 28 ~~~~~~itgtfld~~~~d~~~qnWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p-~~Dlv~~~l 106 (340)
T 4h41_A 28 KNNGLKITGTFLDEISHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMP-SVDLVDMYL 106 (340)
T ss_dssp SSCSCCEEEEEECTTCSSSCCCCCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCC-SBCHHHHHH
T ss_pred ccCCccceEEEehhhcCCCcccCCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCC-cccHHHHHH
Confidence 444555677653211110 111256689999999999999997744 322222 0211 0111233333 356799999
Q ss_pred HHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccC-CCCcE
Q 013811 118 AEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK-DDPTI 196 (436)
Q Consensus 118 ~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk-~~p~I 196 (436)
++|+++||+|.+.|... + ..|.. + + +. . ..+.-+..+++++++ |. +||++
T Consensus 107 ~aa~k~Gmkv~~Gly~S-----~----~~W~~--~-------d-~~-~-e~e~~~~~i~El~~~--------Yg~~h~af 157 (340)
T 4h41_A 107 RLAEKYNMKFYFGLYDS-----G----RYWDT--G-------D-LS-W-EIEDNKYVIDEVWKM--------YGEKYKSF 157 (340)
T ss_dssp HHHHHTTCEEEEECCBC-----S----HHHHH--S-------C-GG-G-GHHHHHHHHHHHHHH--------TTTTCTTE
T ss_pred HHHHHhCCeEEEecCCC-----h----hhcCC--C-------C-HH-H-HHHHHHHHHHHHHHH--------hhccCCCe
Confidence 99999999999988532 1 12421 1 0 11 1 245556788999999 97 69999
Q ss_pred EEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeC
Q 013811 197 MAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 197 ~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG 239 (436)
.+|-|-||+.... ....++++++.+++|++.|+.++.+.
T Consensus 158 ~GWYi~~Ei~~~~----~~~~~~~~~l~~~lk~ls~~lp~~IS 196 (340)
T 4h41_A 158 GGWYISGEISRAT----KGAIDAFRAMGKQCKDISNGLPTFIS 196 (340)
T ss_dssp EEEEECCCCSSCC----TTHHHHHHHHHHHHHHHTTSCCEEEC
T ss_pred eEEEeccccCchh----hhHHHHHHHHHHHHHHhcCCCceEEe
Confidence 9999999997653 24578899999999999998877654
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.19 E-value=8.1e-06 Score=78.53 Aligned_cols=212 Identities=12% Similarity=0.099 Sum_probs=116.6
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+..+.+|+.|++.||++.- | ..++.+++..||+|++.+.+. . ....
T Consensus 17 ~vv~llk~~~i~~vRlY~~---------------d-------~~vL~A~~~tgi~v~lgv~n~--~---~~~~------- 62 (306)
T 1ghs_A 17 DVVQLYRSKGINGMRIYFA---------------D-------GQALSALRNSGIGLILDIGND--Q---LANI------- 62 (306)
T ss_dssp HHHHHHHHHTCCEEEESSC---------------C-------HHHHHHTTTSCCEEEEECCGG--G---HHHH-------
T ss_pred HHHHHHHhcCCCEEEEcCC---------------C-------HHHHHHHHhcCCEEEEecccc--c---hhhh-------
Confidence 4456778899999999421 2 267788889999999998652 1 0000
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccC
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
..-++...++++.-+.. |.....|.+..++||+-.. ....+...++.+.+++++..
T Consensus 63 -------------a~~~~~a~~Wv~~nv~~--------y~~~~~i~~I~VGNEvl~~---~~~~L~~am~~v~~aL~~~g 118 (306)
T 1ghs_A 63 -------------AASTSNAASWVQNNVRP--------YYPAVNIKYIAAGNEVQGG---ATQSILPAMRNLNAALSAAG 118 (306)
T ss_dssp -------------HHCHHHHHHHHHHHTTT--------TTTTSEEEEEEEEESCCGG---GGGGHHHHHHHHHHHHHHHT
T ss_pred -------------hhCHHHHHHHHHHHHhh--------hCCCceEEEEEEeccccCC---CHHHHHHHHHHHHHHHHHCC
Confidence 00123344556666655 6555679999999999753 45678888888888888754
Q ss_pred C-CCEEEeCCC-cccCCCCCccc-c-CCCCCcccchhhhhcCCCCcceEEeecCCCCCCCC----------------CCh
Q 013811 232 R-NHLLEAGLE-GFYGQSTPQRK-R-VNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSS----------------SND 291 (436)
Q Consensus 232 p-~~lV~vG~~-g~~~~~~~~~~-~-~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~----------------~~~ 291 (436)
- +..|++... ..+..+.|-.. . .++......+|. ....|++.+|.||. |... ...
T Consensus 119 l~~ikVst~~~~~~~~~s~pPs~g~F~~~~~~p~l~fL----~~~~~~~~vN~yPy-f~~~~~p~~i~l~yalf~~~~~v 193 (306)
T 1ghs_A 119 LGAIKVSTSIRFDEVANSFPPSAGVFKNAYMTDVARLL----ASTGAPLLANVYPY-FAYRDNPGSISLNYATFQPGTTV 193 (306)
T ss_dssp CTTSEEEEEEEGGGEECCSSGGGCEESSTHHHHHHHHH----HHHTCCEEEECCHH-HHHHHCTTTSCHHHHHTCTTCCE
T ss_pred CCceeEEeccchhhcccCCCCCccchhhhhhhHHHHHH----HhcCCeeEeecChh-hcccCCCCccccchhhcCCCcce
Confidence 3 466775431 12222211000 0 000000001111 13457799999984 2210 000
Q ss_pred -hH-----hHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHHHH
Q 013811 292 -RD-----QLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 292 -~~-----~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~ 346 (436)
+. ...++..-++......++ ..+|||+|+|.|.++.+ .+.+.+....|++.+...
T Consensus 194 ~d~~t~~~y~n~fda~~Dav~~al~~~g~~~~~ivVsEtGWPS~G~~~as~~na~~y~~~li~~ 257 (306)
T 1ghs_A 194 RDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLINH 257 (306)
T ss_dssp ECTTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHTT
T ss_pred eccccccccchHHHHHHHHHHHHHHHcCCCCCeEEEeeccCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 00 001222222222211122 14799999999999875 235667777777766543
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00034 Score=71.05 Aligned_cols=235 Identities=17% Similarity=0.124 Sum_probs=126.8
Q ss_pred HCCCCEEEEcccc-CC---CCCCCcc-----CCCCCCh-hhhhhHHHHHHHHHHc--CCEEEEecccCCCCCCChhhhhh
Q 013811 79 SHGLTVARTWAFS-DG---GYRPLQR-----SPGSYNE-QMFKGLDFVIAEARKY--GIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 79 ~~G~N~vRi~~~~-d~---~~~~lq~-----~pg~~~~-~~l~~lD~~i~~a~~~--Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
.+|++.+|+.+.+ |. .| .+.. +...|+- .....+-.++.+|.+. +|+++... |.. |.
T Consensus 80 Glglsi~R~~IG~~d~s~~~y-sy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~asp---WSp-------P~ 148 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNY-AYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASP---WSP-------PA 148 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCC-CSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEE---SCC-------CG
T ss_pred CCceEEEEEeecCCCCCCCcc-cccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEec---CCC-------cH
Confidence 5899999997643 11 11 1111 1133432 1122334688888884 58887765 322 45
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCC-----CChHHHHHHH
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSD-----PSGRTIQAWI 220 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~-----~~~~~~~~w~ 220 (436)
|++..|... ... .-.++..+.|.+|+..+++. |+++ =.|-+..+.|||..... .+++...+|+
T Consensus 149 wMk~n~~~~-~gg--~L~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fi 217 (447)
T 2wnw_A 149 FMKTNNDMN-GGG--KLRRECYADWADIIINYLLE--------YRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFA 217 (447)
T ss_dssp GGBTTSCSB-SCC--BBCGGGHHHHHHHHHHHHHH--------HHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHH
T ss_pred HhccCCCcC-CCC--cCCHHHHHHHHHHHHHHHHH--------HHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHH
Confidence 655433211 011 12467788888888888888 7765 12667788999987432 2467788888
Q ss_pred H-HHHHHhhccCC-CCEEEeCCCcccCCCCCccccCCCCCcccchhh-hhcCCCCcceEEeecCCCCCCCCCChhHhHHH
Q 013811 221 T-EMASYVKSIDR-NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFV-ANNLIPGIDFATVHSYPDQWLSSSNDRDQLSF 297 (436)
Q Consensus 221 ~-~~~~~Ir~~Dp-~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~-~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~ 297 (436)
+ .+..++++... +.-|..+.+.. . . .|.|. .... ...+.+.+|.+++|.|... ... .
T Consensus 218 k~~L~p~l~~~gl~~~kI~~~D~n~-~--~------~~~~~--~~il~d~~a~~~v~~ia~H~Y~g~-----~~~-~--- 277 (447)
T 2wnw_A 218 VQYLRPRLARQGMDEMEIYIWDHDK-D--G------LVDWA--ELAFADEANYKGINGLAFHWYTGD-----HFS-Q--- 277 (447)
T ss_dssp HHTHHHHHHHTTCTTCEEEEEEEEG-G--G------HHHHH--HHHTTSHHHHHHCCEEEEECTTCC-----CHH-H---
T ss_pred HHHHHHHHHhcCCCCceEEEeCCCc-c--c------hhhHH--HHHhcCHhHHhhCCEEEEEccCCC-----cHH-H---
Confidence 7 77888888666 33454443221 0 0 00000 0000 0112357999999999643 101 0
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 298 LNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
+... ..+..+|+++++|.+......+ .. ....+ ..+...|...+.. ...|+++|.+..
T Consensus 278 ----l~~~---~~~~p~k~lw~TE~~~~~~~~~-~~-~~g~w-~~~a~~ii~~~~~--~~~~~~~Wnl~l 335 (447)
T 2wnw_A 278 ----IQYL---AQCLPDKKLLFSEGCVPMESDA-GS-QIRHW-HTYLHDMIGNFKS--GCSGFIDWNLLL 335 (447)
T ss_dssp ----HHHH---HHHCTTSEEEEEECCCBCCCST-TH-HHHHH-HHHHHHHHHHHHT--TCCEEEEEESEE
T ss_pred ----HHHH---HHHCCCCeEEEeccccCCcccC-CC-CCCcH-HHHHHHHHHHHhc--CCEEEEEhhhhh
Confidence 1111 1112599999999986421110 11 11122 1122233444443 578999999984
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-05 Score=77.02 Aligned_cols=212 Identities=13% Similarity=0.105 Sum_probs=115.6
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 150 (436)
.+..+.+|+.|++.||++.- | ..++.+++..||+|++.+.+. . . ..-
T Consensus 16 ~~vv~llk~~~i~~VRlY~~---------------d-------~~vL~A~~~tgi~v~lgv~n~--~---~---~~~--- 62 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRLYAP---------------N-------QAALQAVGGTGINVVVGAPND--V---L---SNL--- 62 (306)
T ss_dssp HHHHHHHHHHTCCEEEESSC---------------C-------HHHHHHHTTSCCEEEEEECGG--G---H---HHH---
T ss_pred HHHHHHHHhcCCCEEEEcCC---------------C-------HHHHHHHHhcCCEEEEecccc--h---h---hHh---
Confidence 34456778999999999421 2 267788889999999998642 0 0 000
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhcc
Q 013811 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSI 230 (436)
Q Consensus 151 ~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~ 230 (436)
..-.+...++++.-+.. | ....|....++||+-.. + ...+...++.+.+++++.
T Consensus 63 --------------a~~~~~a~~wv~~nv~~--------y-~~~~I~~I~VGNEvl~g-~--~~~L~~am~~v~~aL~~~ 116 (306)
T 1aq0_A 63 --------------AASPAAAASWVKSNIQA--------Y-PKVSFRYVCVGNEVAGG-A--TRNLVPAMKNVHGALVAA 116 (306)
T ss_dssp --------------HHCHHHHHHHHHHHTTT--------C-TTSEEEEEEEEESCCGG-G--GGGHHHHHHHHHHHHHHT
T ss_pred --------------hhCHHHHHHHHHHhhcc--------C-CCccEEEEEecccccCC-C--HHHHHHHHHHHHHHHHHC
Confidence 01123445566666666 7 44569999999999762 2 556778888888888876
Q ss_pred CCC-CEEEeCCC-cccCCCCC-ccccCCCCC----cccchhhhhcCCCCcceEEeecCCCCCCC----C-----------
Q 013811 231 DRN-HLLEAGLE-GFYGQSTP-QRKRVNPNL----DIGTDFVANNLIPGIDFATVHSYPDQWLS----S----------- 288 (436)
Q Consensus 231 Dp~-~lV~vG~~-g~~~~~~~-~~~~~np~~----~~g~df~~~~~~~~iD~~s~H~Y~~~w~~----~----------- 288 (436)
.-+ ..|++... +.+..+.| ....+.+.+ ....+|. ....|++.+|.||. |.. .
T Consensus 117 gl~~IkVsT~~~~~v~~~s~pPS~g~f~~~~~~~~~p~l~fL----~~~~~~~~vN~yPy-f~~~~~p~~i~l~yalf~~ 191 (306)
T 1aq0_A 117 GLGHIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFL----ARTNAPLMANIYPY-LAWAYNPSAMDMGYALFNA 191 (306)
T ss_dssp TCTTSEEEEEEEGGGEEECSSGGGCEECHHHHHHHHHHHHHH----HHHTCCEEEECCHH-HHHHHCTTSSCHHHHHTCC
T ss_pred CCCceeEeccccccccccCCCCcccccchhhHHHHHHHHHHH----HhcCCceeeecchH-hhhcCCCccCccchhhcCC
Confidence 443 45554321 11221111 000000000 0000111 23457789999984 221 0
Q ss_pred -C-ChhH-h---HHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCC-CCChHHHHHHHHHHHHH
Q 013811 289 -S-NDRD-Q---LSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDP-GYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 289 -~-~~~~-~---~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~-g~~~~~r~~~~~~~~~~ 346 (436)
. .... . ..++..-++......++ ..+|||+|+|.|.++.+. +.+.+....|++.+...
T Consensus 192 ~~~~v~d~~~~y~n~fda~~dav~~al~~~g~~~~~ivVsEtGWPS~G~~~as~~na~~y~~~li~~ 258 (306)
T 1aq0_A 192 SGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINH 258 (306)
T ss_dssp CSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCCSSSSTTCCHHHHHHHHHHHHHH
T ss_pred CCccccCcchhhhhHHHHHHHHHHHHHHHhCCCCCeEEEeeeecCcCCCCCCCHHHHHHHHHHHHHh
Confidence 0 0000 0 01122112221111111 137999999999998752 45677777787766654
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=98.06 E-value=4.6e-06 Score=85.75 Aligned_cols=130 Identities=13% Similarity=0.110 Sum_probs=70.5
Q ss_pred cCCC-CcEEEEEeecCCCCCCC---C------ChHHHHHHHHHHHHHhhccC---CCCEEEeCCCcccCCCCCccccCCC
Q 013811 190 YKDD-PTIMAWELMNEPRCTSD---P------SGRTIQAWITEMASYVKSID---RNHLLEAGLEGFYGQSTPQRKRVNP 256 (436)
Q Consensus 190 yk~~-p~I~~weL~NEp~~~~~---~------~~~~~~~w~~~~~~~Ir~~D---p~~lV~vG~~g~~~~~~~~~~~~np 256 (436)
|+++ +....||++|||..... . +.+.+.+|++.++++||+.+ |+-+|. |...-|..-. .+.
T Consensus 131 ~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVG-GpasA~p~~e-----~~n 204 (591)
T 4aw7_A 131 YSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVI-GYAAAYPAWE-----DGN 204 (591)
T ss_dssp HHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEE-EEEESCCCTT-----TTT
T ss_pred hccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEe-cccccccccc-----ccc
Confidence 4433 55778999999994321 1 13478899999999999865 887763 1111111000 010
Q ss_pred C--Cc-ccchhhhhcCCCCcceEEeecCCCCCCCCCCh--hHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCC
Q 013811 257 N--LD-IGTDFVANNLIPGIDFATVHSYPDQWLSSSND--RDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRK 327 (436)
Q Consensus 257 ~--~~-~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~--~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~ 327 (436)
. |. ....|. +.+...+||+|+|.|...|...... ...++..-+-|+++...... .-||++|+|+|....
T Consensus 205 F~~W~~~~k~Fm-d~ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~Ys~~k~G-~vKP~~ISEYG~~~~ 278 (591)
T 4aw7_A 205 FNYWNTRMKMFI-DRAGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEAYSYIKFG-HVKPLAISEFGGIDN 278 (591)
T ss_dssp THHHHHTHHHHH-HHHGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHHHHHHHHS-SCCCEEEEEEEEECC
T ss_pred hhhhhHHHHHHH-HhcCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHHHHHHHhC-CCcceEEeccCCccC
Confidence 0 11 112232 2345689999999997654322110 11233333334444322222 369999999997654
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.99 E-value=8.6e-05 Score=75.02 Aligned_cols=115 Identities=18% Similarity=0.258 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHcCC-EEEEecccC-C---CCCCChh-----hhhhHHhhcCCCCCCCCCCCCChHH---HHHHHHHHHH
Q 013811 111 KGLDFVIAEARKYGI-KLILSLANN-Y---DSFGGKK-----QYVNWARSQGQFLTSDDDFFRNPVV---KGYYKNLIKT 177 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi-~vil~l~~~-w---~~~gg~~-----~y~~W~~~~G~~~~~~~~f~~~~~~---~~~~~~~v~~ 177 (436)
...+.+.+.+.+.|. +-+++|.-. | +-.|... .-.+|..-.. .....|-..|+. .....++++.
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~T~~~~gyv~~d~~g~~~~~~~~p~~rw~~v~~---~k~~~~~~~pd~~d~~v~~~e~v~~ 158 (517)
T 3ik2_A 82 SVYTAFHDKSLAMGVPYSLVTLQAGGYVAADQSGPLANTDVAPSSKWKKVEF---NKNGPLSLTPDTTDGSVYMDEFVNY 158 (517)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEES---CCSSCCCSSCCSSSSEEEHHHHHHH
T ss_pred HHHHHHHHhHHhcCCCceeEEeeccceeecccCCCccccccCCccccceeec---cCCCcccCCCCcCCcceeHHHHHHH
Confidence 456788999999996 678887421 1 0011100 0012321110 111222222221 1233567888
Q ss_pred HHhccccccccccCCCC---cEEEEEeecCCCCC---------CCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 178 VLNRYNTFTGIHYKDDP---TIMAWELMNEPRCT---------SDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 178 iv~r~n~~tg~~yk~~p---~I~~weL~NEp~~~---------~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
++++ |+... .|-.|+|+|||..- ...+.+.+.+...+.+++||++||+..|
T Consensus 159 l~~~--------~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl 221 (517)
T 3ik2_A 159 LVNK--------YGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAET 221 (517)
T ss_dssp HHHH--------HCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHh--------cCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 8888 87663 68999999999631 1125788999999999999999999655
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00024 Score=73.15 Aligned_cols=248 Identities=16% Similarity=0.162 Sum_probs=131.4
Q ss_pred HHHHHHHHHCCCCEEEEcccc-CC---CCCCCccCC-----CCCC--hhhhhhHHHHHHHHHHc---CCEEEEecccCCC
Q 013811 71 STAFHEAASHGLTVARTWAFS-DG---GYRPLQRSP-----GSYN--EQMFKGLDFVIAEARKY---GIKLILSLANNYD 136 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~-d~---~~~~lq~~p-----g~~~--~~~l~~lD~~i~~a~~~---Gi~vil~l~~~w~ 136 (436)
+..|.. ..+|++.+|+.+.+ |. .|. ....+ +.|+ .+.....-.++.+|.++ +|+++... |.
T Consensus 106 ~~lF~~-~Glglsi~R~~IG~~d~s~~~ys-y~d~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~asp---WS 180 (497)
T 2nt0_A 106 KSYFSE-EGIGYNIIRVPMASCDFSIRTYT-YADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASP---WT 180 (497)
T ss_dssp HHHHST-TTTCCCEEEEEESCCSSSSSCCC-SCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEE---SC
T ss_pred HHhcCC-CCCceEEEEEeecCCCCCCCCcc-ccCCCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEec---CC
Confidence 333433 56899999997642 11 111 11111 2343 22213455788888886 69988776 32
Q ss_pred CCCChhhhhhHHhhcCCCCCCCCCCC--CChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCC----
Q 013811 137 SFGGKKQYVNWARSQGQFLTSDDDFF--RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTS---- 209 (436)
Q Consensus 137 ~~gg~~~y~~W~~~~G~~~~~~~~f~--~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~---- 209 (436)
. |.|++..|... ....+- .+++..+.|.+|+..+++. |+++ =.|-+..+.|||....
T Consensus 181 p-------P~wMk~n~~~~-ggG~L~~~~~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~~ 244 (497)
T 2nt0_A 181 S-------PTWLKTNGAVN-GKGSLKGQPGDIYHQTWARYFVKFLDA--------YAEHKLQFWAVTAENEPSAGLLSGY 244 (497)
T ss_dssp C-------CGGGBTTCSSS-SSCBBSSCTTSHHHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSSGGGGGSTTC
T ss_pred C-------cHHHhcCCCcC-CCCccCCccchhHHHHHHHHHHHHHHH--------HHHcCCCeeEEeeccCCCcccCCCC
Confidence 2 45555433211 001111 1234788888888888888 7765 2377888999997632
Q ss_pred C-----CChHHHHHHHH-HHHHHhhccCC-CCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCC
Q 013811 210 D-----PSGRTIQAWIT-EMASYVKSIDR-NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYP 282 (436)
Q Consensus 210 ~-----~~~~~~~~w~~-~~~~~Ir~~Dp-~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~ 282 (436)
. .+++...+|++ .+..++++..- +.-|..+.+..+. .|.|.. .-+....+...+|.+++|.|.
T Consensus 245 ~~~s~~~t~~~~~~fik~~L~p~L~~~gl~~~kI~~~D~n~~~---------~~~~~~-~~l~d~~a~~~v~~ia~H~Y~ 314 (497)
T 2nt0_A 245 PFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLL---------LPHWAK-VVLTDPEAAKYVHGIAVHWYL 314 (497)
T ss_dssp CSSCCBCCHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGG---------TTHHHH-HHHTSHHHHTTCCEEEEEEET
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCc---------chhHHH-HHhcChhhHhhcceEEEEecC
Confidence 1 24677788888 67888887553 4455554432211 111100 001011235789999999996
Q ss_pred CCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCC----CCCCChHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013811 283 DQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRK----DPGYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358 (436)
Q Consensus 283 ~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~----~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~ 358 (436)
+.-. ..... +... ..+..+|+++++|.+.... ..+...-.+...+ ...|...++. ...
T Consensus 315 ~~~~---~~~~~-------l~~~---~~~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~---a~~ii~~l~~--~~~ 376 (497)
T 2nt0_A 315 DFLA---PAKAT-------LGET---HRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQY---SHSIITNLLY--HVV 376 (497)
T ss_dssp TSCC---CHHHH-------HHHH---HHHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHH---HHHHHHHHHT--TEE
T ss_pred CCCC---ChHHH-------HHHH---HHHCCCCcEEEecccCCCCCccCCCCcCcHHHHHHH---HHHHHHHHhh--cce
Confidence 4311 11000 1111 1112599999999875421 1111111222222 2233444544 478
Q ss_pred ceeeccccc
Q 013811 359 GGLFWQLLT 367 (436)
Q Consensus 359 G~~~W~~~~ 367 (436)
||++|.+..
T Consensus 377 ~~~~Wnl~l 385 (497)
T 2nt0_A 377 GWTDWNLAL 385 (497)
T ss_dssp EEEEEESEE
T ss_pred eeEeeeeee
Confidence 999999974
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=2.8e-05 Score=80.44 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=65.4
Q ss_pred HHHHHHHHHHcCCEEEEecccC-C---CCCCChhhhh-----hHHhhcCCCCCCCCCCCCChH---HHHHHHHHHHHHHh
Q 013811 113 LDFVIAEARKYGIKLILSLANN-Y---DSFGGKKQYV-----NWARSQGQFLTSDDDFFRNPV---VKGYYKNLIKTVLN 180 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~-w---~~~gg~~~y~-----~W~~~~G~~~~~~~~f~~~~~---~~~~~~~~v~~iv~ 180 (436)
+|++++.|++.|...++++.-. | +..|+...+. .|..-... ....|-.+|+ -......+++.+..
T Consensus 92 ~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~~~w~e~~n~---~~~~~~~~p~~~~g~~~~~~~~~~lr~ 168 (524)
T 2yih_A 92 VTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPSARWNQVVNA---KNAPFQLQPDLNDNYVYVDEFVHFLVN 168 (524)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEESC---CCSCCCSSCCSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcccchhhhhcc---ccCcccccCCCCCcchhHHHHHHHHHH
Confidence 8999999999999999998421 1 0012222221 22211000 0000000110 00112355666666
Q ss_pred ccccccccccCCC--C-cEEEEEeecCCCCC---------CCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 181 RYNTFTGIHYKDD--P-TIMAWELMNEPRCT---------SDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 181 r~n~~tg~~yk~~--p-~I~~weL~NEp~~~---------~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+ |+.. | .|-.|+|+|||..- ...+.+.+...+.+.+++||++||+..|.
T Consensus 169 ~--------~G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~ 229 (524)
T 2yih_A 169 K--------YGTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVF 229 (524)
T ss_dssp H--------HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred H--------cCCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 6 5432 1 38899999999751 11246788889999999999999996544
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3e-05 Score=77.61 Aligned_cols=105 Identities=15% Similarity=0.039 Sum_probs=63.5
Q ss_pred HHHHH-HHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh
Q 013811 72 TAFHE-AASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 72 ~~l~~-l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 150 (436)
+.|.. ...+|++.+|+.+-++. ..+.....++.+|.+.||+++....+. |.|++.
T Consensus 38 ~lF~~~~~g~g~s~~R~~ig~~~--------------~~~~~~~~~~k~A~~~~~~i~aspWsp----------P~WMk~ 93 (401)
T 3kl0_A 38 TAFGNGQNQLGFSILRIHVDENR--------------NNWYKEVETAKSAVKHGAIVFASPWNP----------PSDMVE 93 (401)
T ss_dssp HHHCCSTTCCCCCEEEEEECSSG--------------GGGGGGHHHHHHHHHTTCEEEEEESCC----------CGGGEE
T ss_pred HhcCCCCCCCceEEEEEEeCCCc--------------ccchhHHHHHHHHHhCCCEEEEecCCC----------CHHhcc
Confidence 34443 24689999999764221 112223568889999999998887443 456553
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEEEeecCCCCC
Q 013811 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAWELMNEPRCT 208 (436)
Q Consensus 151 ~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~weL~NEp~~~ 208 (436)
.+........-.-.++..+.|.+|+..+++. |+.+- .|-+..+.|||...
T Consensus 94 ~~~~~g~~~~g~L~~~~y~~yA~Y~~k~i~~--------y~~~Gi~i~~is~qNEP~~~ 144 (401)
T 3kl0_A 94 TFNRNGDTSAKRLKYNKYAAYAQHLNDFVTF--------MKNNGVNLYAISVQNEPDYA 144 (401)
T ss_dssp EEEETTEEEEEEECGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTSC
T ss_pred CCCcCCCccCCcCChHHHHHHHHHHHHHHHH--------HHHCCCCeEEEeeecccCCC
Confidence 2110000000011356677888888888887 77662 36667789999764
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00049 Score=66.16 Aligned_cols=215 Identities=13% Similarity=0.136 Sum_probs=116.4
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 150 (436)
.+.++.+|+.|++.||++.- |+ .++.+++..||+|++.+.+. . ...
T Consensus 17 ~~vv~llks~gi~~VRlYda---------------D~-------~vL~Al~~sgi~v~vGV~n~--~---l~~------- 62 (316)
T 3em5_A 17 SEVIALYKKSNITRMRIYDP---------------NQ-------AVLEALRGSNIELILGVPNS--D---LQS------- 62 (316)
T ss_dssp HHHHHHHHHTTCCEEECSSC---------------CH-------HHHHHHTTCCCEEEEEECGG--G---HHH-------
T ss_pred HHHHHHHHHcCCCEEEEecC---------------CH-------HHHHHhhcCCceEEEecccc--h---hhh-------
Confidence 35567778999999998421 22 57789999999999998653 0 000
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCC---hHHHHHHHHHHHHHh
Q 013811 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPS---GRTIQAWITEMASYV 227 (436)
Q Consensus 151 ~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~---~~~~~~w~~~~~~~I 227 (436)
..++ ..-.++++.=|.. |.....|....++||+-.....+ ...+...++.+.+++
T Consensus 63 -----------la~~---~~A~~WV~~nV~~--------y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL 120 (316)
T 3em5_A 63 -----------LTNP---SNAKSWVQKNVRG--------FWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAI 120 (316)
T ss_dssp -----------HTSH---HHHHHHHHHHTGG--------GTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHH
T ss_pred -----------ccCH---HHHHHHHHHhhhh--------cCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHH
Confidence 1111 2233455555555 65556799999999997654333 456667777888888
Q ss_pred hccCC--CCEEEeCCC-cccCCCCC-ccccCCCCC----cccchhhhhcCCCCcceEEeecCCCCCCCC---CC--hh--
Q 013811 228 KSIDR--NHLLEAGLE-GFYGQSTP-QRKRVNPNL----DIGTDFVANNLIPGIDFATVHSYPDQWLSS---SN--DR-- 292 (436)
Q Consensus 228 r~~Dp--~~lV~vG~~-g~~~~~~~-~~~~~np~~----~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~---~~--~~-- 292 (436)
++..= ...|++... +.+..+.| ..-.+.+.. ..-.+|. ....+.+.++.||. |... .. .+
T Consensus 121 ~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~~pil~fL----~~~~sp~~vN~YPy-f~~~~~~~~i~l~yA 195 (316)
T 3em5_A 121 RSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFL----SSIRSPLLANIYPY-FTYAGNPRDISLPYA 195 (316)
T ss_dssp HHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHHHHHHHHH----HHTTCCEEEECCHH-HHHHHCTTTSCHHHH
T ss_pred HHCCCCCceEEEecccccccccCCCCCCceechhHHHHHHHHHHHH----HhcCCeeEeecchh-hhccCCCCCcCchhh
Confidence 87654 345665331 12222221 100011100 0001111 12345677888873 1110 00 00
Q ss_pred -----------H---hHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCC-CCChHHHHHHHHHHHHH
Q 013811 293 -----------D---QLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDP-GYSTYQRDVMFNTVYYK 346 (436)
Q Consensus 293 -----------~---~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~-g~~~~~r~~~~~~~~~~ 346 (436)
. -...+..-+++....-++ ..++||+|+|.|.++... +.+.+....|++.+...
T Consensus 196 lf~~~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~V~EtGWPs~G~~~as~~na~~y~~~li~~ 266 (316)
T 3em5_A 196 LFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGWPSAGAFAATFDNGRTYLSNLIQH 266 (316)
T ss_dssp TTCCSSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHHH
T ss_pred cccCCCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceEeccccCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 0 011222222222211111 146999999999998753 35677777887766654
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00023 Score=75.30 Aligned_cols=212 Identities=14% Similarity=0.093 Sum_probs=115.7
Q ss_pred HHCCCCEEEEccccCC-CCCCCccCCCCCChh--h-hhhHHHHHHHHHHcC--CEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 78 ASHGLTVARTWAFSDG-GYRPLQRSPGSYNEQ--M-FKGLDFVIAEARKYG--IKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 78 ~~~G~N~vRi~~~~d~-~~~~lq~~pg~~~~~--~-l~~lD~~i~~a~~~G--i~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+.+|++.+|+.+.+.. .....+++...+..+ . ....-.++.+|++++ |+++... |.. |.|++..
T Consensus 63 ~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~lk~A~~~~p~lki~asp---WSp-------P~WMK~n 132 (656)
T 3zr5_A 63 FGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKRNPDIILMGLP---WSF-------PGWLGKG 132 (656)
T ss_dssp TSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHHHHHHHHHCTTCEEEEEE---SCB-------CGGGGTT
T ss_pred CCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHHHHHHHHhCCCcEEEEec---CCC-------cHHhccC
Confidence 4679999999775321 111122222222211 1 123346788888776 6776665 432 5676642
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc-CCC-CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhc
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY-KDD-PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKS 229 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y-k~~-p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~ 229 (436)
+ . + .++..+.|.+|+..+++. | +.+ =.|-+..+.|||... ..|++.+..++++
T Consensus 133 ~-~-------l-~~~~y~~yA~Ylvk~i~~--------y~~~~GI~i~~Is~qNEP~~~--------~~fik~L~p~L~~ 187 (656)
T 3zr5_A 133 F-S-------W-PYVNLQLTAYYVVRWILG--------AKHYHDLDIDYIGIWNERPFD--------ANYIKELRKMLDY 187 (656)
T ss_dssp S-S-------C-TTSSHHHHHHHHHHHHHH--------HHHHHCCCCCEECSCTTSCCC--------HHHHHHHHHHHHH
T ss_pred C-C-------C-ChHHHHHHHHHHHHHHHH--------HHHhcCCceEEEeeccCCCcc--------ccHHHHHHHHHHH
Confidence 2 1 1 245566777777777765 4 222 246677889999863 4688889999998
Q ss_pred cCCC-CEEEeCCCcccCCCCCccccCCCCCcccch-hhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHH
Q 013811 230 IDRN-HLLEAGLEGFYGQSTPQRKRVNPNLDIGTD-FVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQ 307 (436)
Q Consensus 230 ~Dp~-~lV~vG~~g~~~~~~~~~~~~np~~~~g~d-f~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~ 307 (436)
...+ ..|.++.+.+ .. +. .. +....+...+|.+++| |..... . .
T Consensus 188 ~gl~~~kI~~~D~n~-~~-----------~~--~~il~d~~a~~~v~gia~H-Y~g~~~---~-------------~--- 233 (656)
T 3zr5_A 188 QGLQRVRIIASDNLW-EP-----------IS--SSLLLDQELWKVVDVIGAH-YPGTYT---V-------------W--- 233 (656)
T ss_dssp TTCTTCEEEEEEECS-TT-----------HH--HHHHHCHHHHHHCCEEEEE-SCTTCC---C-------------H---
T ss_pred cCCCccEEEEcCCCc-hH-----------HH--HHHhcCHhHHhhccEEEEE-CCCCCc---c-------------h---
Confidence 8776 4555544332 10 00 00 1011224578999999 754311 0 0
Q ss_pred HHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 308 DAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 308 ~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+.. .+|+++++|.+...+ +......+-+.+...+.. ....+|++|.+..+
T Consensus 234 ~~~~-p~k~lw~TE~~~~~~----~~~g~g~wa~~i~~~~~~-----~~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 234 NAKM-SGKKLWSSEDFSTIN----SNVGAGCWSRILNQNYIN-----GNMTSTIAWNLVAS 284 (656)
T ss_dssp HHHH-HTCEEEEEEEECSCT----THHHHHHHHHHHHHHHHH-----HCCCEEEEECSEEC
T ss_pred HhhC-CCCceEEEccccCCC----CCCCccHHHHHHHHHHHh-----CCceEEEEEeeeeC
Confidence 1222 799999999874321 111111222222222211 25789999999864
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00089 Score=63.74 Aligned_cols=181 Identities=14% Similarity=0.145 Sum_probs=98.2
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
..+...++.+.++|-.++|+++- + .+ ..+....|. | ..+++.+++.++. +
T Consensus 49 ~~~~~~~~~~~~~G~i~~isw~P-~---~~----~~~~i~~G~--------~---------d~~i~~~A~~l~~-----~ 98 (283)
T 2v3g_A 49 SWVRPYADAVYNNGSILMITWEP-W---EY----NTVDIKNGK--------A---------DAYITRMAQDMKA-----Y 98 (283)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC-T---TC----CHHHHHTTT--------T---------HHHHHHHHHHHHH-----H
T ss_pred hHHHHHHHHHHhCCCEEEEEeCC-C---CC----CHHHhcCCc--------h---------HHHHHHHHHHHHh-----c
Confidence 34556777888999999999762 1 11 112222331 1 1222233322111 3
Q ss_pred CCCCcEEEEEeecCCCCCCC----------CChHHHHHHHHHHHHHhhccCCCCEEEeCCC-cccCCCCCccccCCCCCc
Q 013811 191 KDDPTIMAWELMNEPRCTSD----------PSGRTIQAWITEMASYVKSIDRNHLLEAGLE-GFYGQSTPQRKRVNPNLD 259 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~----------~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~-g~~~~~~~~~~~~np~~~ 259 (436)
+.| | .|-+..|.+.... .+++.+.+..+.+++++|+..-+.++.+=+. ............++|
T Consensus 99 -g~p-V-~~R~~hE~nG~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~~~~~~~~YP--- 172 (283)
T 2v3g_A 99 -GKE-I-WLRPLHEANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYP--- 172 (283)
T ss_dssp -CSC-E-EEEESCCTTSSSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCC---
T ss_pred -CCc-E-EEEeccccCCCcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCccchhhhCC---
Confidence 346 4 3789999986411 1467888889999999998754555543110 000000011112333
Q ss_pred ccchhhhhcCCCCcceEEeecCCCC----CCCC-CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChH
Q 013811 260 IGTDFVANNLIPGIDFATVHSYPDQ----WLSS-SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTY 334 (436)
Q Consensus 260 ~g~df~~~~~~~~iD~~s~H~Y~~~----w~~~-~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~ 334 (436)
|. +.+|++++-.|... |++. ..+ .+.+....+.++. .+||+.|+|+|..... |
T Consensus 173 -GD--------dyVDivG~D~Y~~~~~~~~~~~~~~f-------~~~~~~~~~~~~~-~~Kpi~i~E~G~~~~g-g---- 230 (283)
T 2v3g_A 173 -GD--------NYVDYTSIDGYNWGTTQSWGSQWQSF-------DQVFSRAYQALAS-INKPIIIAEFASAEIG-G---- 230 (283)
T ss_dssp -CG--------GGCSBEEEEEEECTTCCTTTCCCCCH-------HHHHHHHHHHHTT-SSSCEEEEEEEECSTT-S----
T ss_pred -CC--------CEEEEEEEEccCCCCcccccchhHhH-------HHHHHHHHHHHHh-CCCcEEEEeecCCCCC-C----
Confidence 22 46899998888531 2211 112 2222333334444 7999999999987532 2
Q ss_pred HHHHHHHHHHHHHHH
Q 013811 335 QRDVMFNTVYYKIYS 349 (436)
Q Consensus 335 ~r~~~~~~~~~~i~~ 349 (436)
.+..|++.+++.+.+
T Consensus 231 dk~~W~~~~~~~~~~ 245 (283)
T 2v3g_A 231 NKARWITEAYNSIRT 245 (283)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHH
Confidence 356788888876543
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00097 Score=68.19 Aligned_cols=119 Identities=16% Similarity=0.285 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHcCCEEEEeccc-CCCCC-C-------Ch--hhh-------hhHHhhcCCCCCCCCCCCC--ChH----
Q 013811 111 KGLDFVIAEARKYGIKLILSLAN-NYDSF-G-------GK--KQY-------VNWARSQGQFLTSDDDFFR--NPV---- 166 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~-~w~~~-g-------g~--~~y-------~~W~~~~G~~~~~~~~f~~--~~~---- 166 (436)
...+.+++..+++|.+.+++|.- .|-.- | +. ..| +.|....|-.+......++ +|.
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~~~ 172 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTIGWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDANT 172 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSSEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGTEE
T ss_pred hHHHHHHHHHHhcCCceeEEEeccceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccccC
Confidence 46789999999999999999852 11100 0 00 001 1243222211100011111 221
Q ss_pred --HHHHHHHHHHHHHhccccccccccCCC--CcEEEEEeecCCCCCC---------CCChHHHHHHHHHHHHHhhccCCC
Q 013811 167 --VKGYYKNLIKTVLNRYNTFTGIHYKDD--PTIMAWELMNEPRCTS---------DPSGRTIQAWITEMASYVKSIDRN 233 (436)
Q Consensus 167 --~~~~~~~~v~~iv~r~n~~tg~~yk~~--p~I~~weL~NEp~~~~---------~~~~~~~~~w~~~~~~~Ir~~Dp~ 233 (436)
-..+..++|+.++++ |+.. -.|-.|+|.|||.... ..+.+.+.+-..+.+++||.+||+
T Consensus 173 ~~~~~y~~~~v~~l~~~--------~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~ 244 (535)
T 3ii1_A 173 LVDSTFQQGWAQHLVSQ--------WGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPS 244 (535)
T ss_dssp ECCHHHHHHHHHHHHHH--------HCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcHHHHHHHHHHHHHh--------cCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCC
Confidence 144556677777766 4332 3588999999995311 124567788888999999999999
Q ss_pred CEEE
Q 013811 234 HLLE 237 (436)
Q Consensus 234 ~lV~ 237 (436)
..|.
T Consensus 245 i~l~ 248 (535)
T 3ii1_A 245 ALIV 248 (535)
T ss_dssp SEEE
T ss_pred cEEe
Confidence 7664
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.001 Score=68.68 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=32.3
Q ss_pred cEEEEEeecCCCC----CC-----CCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 195 TIMAWELMNEPRC----TS-----DPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 195 ~I~~weL~NEp~~----~~-----~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
.|-.|+|+|||.. .. ..+.+.+.+.+.+.++++|..||+..+
T Consensus 177 ~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l 227 (519)
T 2e4t_A 177 GIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEI 227 (519)
T ss_dssp SCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 3888999999943 11 114677888899999999999999544
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.004 Score=60.43 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=86.2
Q ss_pred HHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC-CChHHHHHHHHHHHHHhhccC--CCCEEEeCCCcccCCC
Q 013811 171 YKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD-PSGRTIQAWITEMASYVKSID--RNHLLEAGLEGFYGQS 247 (436)
Q Consensus 171 ~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~-~~~~~~~~w~~~~~~~Ir~~D--p~~lV~vG~~g~~~~~ 247 (436)
|..+++.+++.++. + +.| | .|-+..|.+.... .+++.+.+..+.+++++|+.. +|.+..-...+.....
T Consensus 91 yd~~i~~~a~~l~~-----~-gvP-V-~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~ 162 (333)
T 2ddx_A 91 YNANIDTLLNTLAG-----Y-DRP-V-YLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTP 162 (333)
T ss_dssp THHHHHHHHHHHHT-----T-CSC-E-EEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSC
T ss_pred HHHHHHHHHHHHHh-----c-CCC-E-EEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCC
Confidence 34455555555221 2 345 3 4788999886432 356788899999999999984 5543332221110111
Q ss_pred CCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCC
Q 013811 248 TPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRK 327 (436)
Q Consensus 248 ~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~ 327 (436)
......++| | .+.+|++++-.|... . .+... +....+.++. .+||+.|+|+|....
T Consensus 163 ~~~~~~~YP----G--------DdyVDivG~D~Y~~~--~-~~~~~--------~~~~~~~a~~-~~KPi~i~E~G~~~~ 218 (333)
T 2ddx_A 163 GGQLDQWWP----G--------SEYVDWVGLSYFAPQ--D-CNWDR--------VNEAAQFARS-KGKPLFLNESTPQRY 218 (333)
T ss_dssp SSCCGGGCC----C--------GGGCSEEEEEESSGG--G-GTTHH--------HHHHHHHHHH-HTCCEEEEEECCTTE
T ss_pred CCchhhcCC----C--------CCEEEEEEEeccCCC--C-cCHHH--------HHHHHHHHhc-CCCcEEEeccCCccc
Confidence 111122344 2 356899999999632 1 01111 2333334444 799999999997640
Q ss_pred -----------CCCCC------hHHHHHHHHHHHHHHHHHhhcCCCc-cceeeccc
Q 013811 328 -----------DPGYS------TYQRDVMFNTVYYKIYSSAKRGGAA-AGGLFWQL 365 (436)
Q Consensus 328 -----------~~g~~------~~~r~~~~~~~~~~i~~~~~~~~~~-~G~~~W~~ 365 (436)
..|.. ......|++.+++.+.+ ...+ .+..++..
T Consensus 219 ~~~~l~~~~~~~~G~n~~~k~~~~~w~~W~~~~~~~l~~----~p~v~k~~~wfn~ 270 (333)
T 2ddx_A 219 QVADLTYSADPAKGTNRQSKTSQQLWDEWFAPYFQFMSD----NSDIVKGFTYINA 270 (333)
T ss_dssp ETTTTEECSCTTTCCSCEECCHHHHHHHTHHHHHHHHHH----TTTTEEEEEEECS
T ss_pred ccccccccccccCCccccccccchhHHHHHHHHHHHHHh----CcchheeEEEeec
Confidence 01211 11226788887776544 2355 45555554
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.011 Score=62.10 Aligned_cols=144 Identities=16% Similarity=0.180 Sum_probs=86.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
-..+.+.|+.+|++|+|+|=+-...+. +|. .+.+.-| ..+.|+++|++|+++||+||+++.-+ +
T Consensus 171 ~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~G-----t~~df~~lv~~~H~~Gi~VilD~V~N--H 243 (583)
T 1ea9_C 171 LQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFG-----DKDTLKKLVDLCHERGIRVLLDAVFN--H 243 (583)
T ss_dssp HHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTC-----CHHHHHHHHHHHTTTTCEEEEECCCS--B
T ss_pred HHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEccc--c
Confidence 345667799999999999998432221 121 1122222 25788999999999999999998522 1
Q ss_pred CCCh-------------hhhhhHHhhcCCCC------CCC----------CCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 138 FGGK-------------KQYVNWARSQGQFL------TSD----------DDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 138 ~gg~-------------~~y~~W~~~~G~~~------~~~----------~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
++.. ..|..|..-.+.+. ... +-=+.+|.+++...+.++..++.
T Consensus 244 ~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~------- 316 (583)
T 1ea9_C 244 SGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRE------- 316 (583)
T ss_dssp CCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHH-------
T ss_pred CCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHh-------
Confidence 1110 11222321111000 000 11145789999999999999965
Q ss_pred ccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+=+ =+-.+++|+.. ..+++++.+.+++.+|+.++.
T Consensus 317 -~gvD--GfR~D~~~~~~----------~~f~~~~~~~v~~~~p~~~~i 352 (583)
T 1ea9_C 317 -TGID--GWRLDVANEVS----------HQFWREFRRVVKQANPDAYIL 352 (583)
T ss_dssp -HCCS--EEEETTCTTSC----------HHHHHHHHHHHHHHCTTCEEE
T ss_pred -cCce--EEEecccccCC----------HHHHHHHHHHHHhhCCCeEEE
Confidence 4322 12345555532 457788888999999986543
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0022 Score=64.04 Aligned_cols=103 Identities=17% Similarity=0.396 Sum_probs=72.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEE--EEecccCCCCCCCh-
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKL--ILSLANNYDSFGGK- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~v--il~l~~~w~~~gg~- 141 (436)
+...++..|+.||++|+.-|-+.+. |-.++. .|++|| |..++++++.+++.||++ |+++|. +||.
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mv~~~GLKlq~vmSFHq----CGgNV 100 (498)
T 1fa2_A 32 DKEKVEDELKQVKAGGCDGVMVDVW----WGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSFHQ----CGGNV 100 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 3578999999999999999999432 223444 488899 999999999999999999 566664 3441
Q ss_pred -----hhhhhHHhhcCCCCCCCCCCCCC----------------------hHHHHHHHHHHHHHHhc
Q 013811 142 -----KQYVNWARSQGQFLTSDDDFFRN----------------------PVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 142 -----~~y~~W~~~~G~~~~~~~~f~~~----------------------~~~~~~~~~~v~~iv~r 181 (436)
-..|.|..+.|.. +++-||+| ....+.|.+|++.+.+.
T Consensus 101 GD~~~IPLP~WV~~~~~~--~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~ 165 (498)
T 1fa2_A 101 GDAVFIPIPQWILQIGDK--NPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDN 165 (498)
T ss_dssp TCCCCBCSCHHHHHHTTT--CGGGEEECTTCCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHHHHH
T ss_pred CCcccccCCHHHHHhhcc--CCCceEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 1357888765532 12233332 23468888888888877
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.015 Score=60.91 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCC----CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCCCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDG----GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNYDS 137 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~ 137 (436)
..+.+.|+.+|++|+|+|=+-...+. +|.. +.+.-|. .+.|+++|++|+++||+||+++. |+-..
T Consensus 176 ~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt-----~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 250 (588)
T 1j0h_A 176 QGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGD-----KETLKTLIDRCHEKGIRVMLDAVFNHCGY 250 (588)
T ss_dssp HHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCC-----HHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCC-----HHHHHHHHHHHHHCCCEEEEEECcCcCcc
Confidence 44667799999999999998432111 1211 1222222 57789999999999999999985 32111
Q ss_pred C----------CChhhhhhHHhhcCCCC-----CC----------CCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 138 F----------GGKKQYVNWARSQGQFL-----TS----------DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 138 ~----------gg~~~y~~W~~~~G~~~-----~~----------~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
- |-...|..|..-.+.+. +. .+-=+.+|.+++...+.++..++. |.=
T Consensus 251 ~~~~f~~~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~--------~gi 322 (588)
T 1j0h_A 251 EFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIRE--------FDI 322 (588)
T ss_dssp TCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHH--------HCC
T ss_pred cchhHHHHHhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHh--------cCC
Confidence 0 00113334432111110 00 011245789999999999999865 432
Q ss_pred CCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 193 DPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+ =+-.++.++. ...+++++.+.+|+.+|+.++.
T Consensus 323 D--GfR~D~a~~~----------~~~f~~~~~~~v~~~~p~~~~i 355 (588)
T 1j0h_A 323 D--GWRLDVANEI----------DHEFWREFRQEVKALKPDVYIL 355 (588)
T ss_dssp C--EEEETTGGGS----------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred c--EEEEeccccC----------CHHHHHHHHHHHHHhCCCeEEE
Confidence 2 1224555543 1467788888999999976543
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.015 Score=60.95 Aligned_cols=144 Identities=22% Similarity=0.265 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCCCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNYDS 137 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~ 137 (436)
..+.+.|+.+|++|+|+|=+-...+. +|. .+.+.-|. .+.|+++|++|+++||+||+++. |+-..
T Consensus 173 ~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt-----~~dfk~lv~~~H~~Gi~VilD~V~NH~~~ 247 (585)
T 1wzl_A 173 KGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGD-----LPTFRRLVDEAHRRGIKIILDAVFNHAGD 247 (585)
T ss_dssp HHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCC-----HHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred HHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCC-----HHHHHHHHHHHHHCCCEEEEEEcCCcCCC
Confidence 34667799999999999998432111 121 11222222 57789999999999999999985 32111
Q ss_pred C----------CChhhhhhHHhhcCCCC-----CC-----------CCCCCCChHHHHHHHHHHHHHHhccccccccccC
Q 013811 138 F----------GGKKQYVNWARSQGQFL-----TS-----------DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191 (436)
Q Consensus 138 ~----------gg~~~y~~W~~~~G~~~-----~~-----------~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk 191 (436)
- |-...|..|..-.+.+. .. .+-=+.+|.+++...+.++..+ . |+
T Consensus 248 ~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~--------~g 318 (585)
T 1wzl_A 248 QFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-E--------QG 318 (585)
T ss_dssp TSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-H--------TT
T ss_pred ccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-h--------CC
Confidence 0 00012333332111010 00 0111457889999999999888 4 43
Q ss_pred CCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 192 DDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 192 ~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
=+ =+-.+++|+.. ..+++++.+.+++.+|+.++.
T Consensus 319 vD--GfR~D~a~~~~----------~~f~~~~~~~v~~~~p~~~~i 352 (585)
T 1wzl_A 319 ID--GWRLDVANEVD----------HAFWREFRRLVKSLNPDALIV 352 (585)
T ss_dssp CC--EEEETTGGGSC----------HHHHHHHHHHHHHHCTTCEEE
T ss_pred Ce--EEEEeccccCC----------HHHHHHHHHHHHHHCCCEEEE
Confidence 22 12245555432 457788888999999986543
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.065 Score=53.94 Aligned_cols=220 Identities=16% Similarity=0.076 Sum_probs=109.6
Q ss_pred hhhhhHHHHHHHHHHcCCEEEEecccCCCCC-CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 108 QMFKGLDFVIAEARKYGIKLILSLANNYDSF-GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 108 ~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~-gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
..++.+++.+.++.++|=-|.++.| |..+ .|.+.|. . .+.-+ ..........+.|..+++.|+...+.
T Consensus 89 ~~~~~i~~~i~~~~~rGGIvTlsWH--~~np~tg~~~~d---t-s~~~~---~~ilpGg~~~~~y~~~l~~iA~~l~~-- 157 (475)
T 3tp4_A 89 ENIALFADYIRKADAIGGVNTVGAG--VENFVTGGSFYD---T-SGDTL---RAVLPGGSHHAELVAYLDDIAELADA-- 157 (475)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEE--SGGGSTTSTTCC-------CHH---HHHSTTSTTHHHHHHHHHHHHHHHHH--
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEeC--CCCCCCCCCccc---C-CHHHH---HHhcCCCchhHHHHHHHHHHHHHHHh--
Confidence 3456677777788888988888876 2211 1111110 0 00000 00000001123455555555543221
Q ss_pred ccccCC-----CCcEEEEEeecCCCCCCCC------ChHHHHHHHHHHHHHhhcc-CCCCEEEe-CCCcccCCCCCcccc
Q 013811 187 GIHYKD-----DPTIMAWELMNEPRCTSDP------SGRTIQAWITEMASYVKSI-DRNHLLEA-GLEGFYGQSTPQRKR 253 (436)
Q Consensus 187 g~~yk~-----~p~I~~weL~NEp~~~~~~------~~~~~~~w~~~~~~~Ir~~-Dp~~lV~v-G~~g~~~~~~~~~~~ 253 (436)
+++ -|. .|=+..|.+....+ +++.+.+..+.+.+++|+. .-+.++-+ ...+-++........
T Consensus 158 ---Lk~~~g~gvPV--l~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~ 232 (475)
T 3tp4_A 158 ---SRRDDGTLIPI--VFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLR 232 (475)
T ss_dssp ---CBCTTSCBCCE--EEEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGG
T ss_pred ---hccccCCCceE--EEEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhh
Confidence 443 343 37888888865332 2467888889999999963 33445543 111100000000012
Q ss_pred CCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC--CCC
Q 013811 254 VNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD--PGY 331 (436)
Q Consensus 254 ~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~--~g~ 331 (436)
++| ..+.+|++++-.|... ....+.. -+.+-+....+.|+. .+||+.|+|+|..... .|.
T Consensus 233 ~YP------------GDdyVDiVG~D~Y~~~--~~~~f~~---~~~~~l~~l~~~A~~-~gKpiaItE~G~~~~~~~~G~ 294 (475)
T 3tp4_A 233 TYP------------GDAFVDVLGLDTYDST--GSDAFLA---GLVADLRMIAEIADE-KGKVSAFTRFGVSGGVGTNGS 294 (475)
T ss_dssp GCC------------CTTTCSEECCEEEESS--CCHHHHH---HHHHHHHHHHHHHHH-HTCEECBCEEEETTCSSTTSC
T ss_pred cCC------------CCCeEEEEEEeccCCC--CchhHHH---HHHHHHHHHHHHHhh-CCCcEEEEeeccCCCcccCCC
Confidence 233 2467999999999642 1111111 112223333444554 7999999999998621 111
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCccceeeccc
Q 013811 332 STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL 365 (436)
Q Consensus 332 ~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~ 365 (436)
....|++.++..|.+... ...++=.++|.-
T Consensus 295 ---~da~W~t~~l~~i~~~P~-v~~iaYvl~WrN 324 (475)
T 3tp4_A 295 ---SPAQWFTKVLAAIKADPV-ASRNAYMETGEN 324 (475)
T ss_dssp ---CCTTHHHHHHHHHHTCTT-TTCCCEEEECCC
T ss_pred ---chHHHHHHHHHHHHhCcc-cceeEEEEEEcC
Confidence 235788887765533210 113445677874
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0029 Score=63.16 Aligned_cols=103 Identities=15% Similarity=0.350 Sum_probs=71.0
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEE--EEecccCCCCCCCh-
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKL--ILSLANNYDSFGGK- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~v--il~l~~~w~~~gg~- 141 (436)
++..++..|+.||++|+.-|-+.+. |-.++. .|++|| |..++++++.+++.||++ |+++|. +||.
T Consensus 31 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~l~~mv~~~GLKlq~vmSFHq----CGgNV 99 (495)
T 1wdp_A 31 DPDGLKEQLLQLRAAGVDGVMVDVW----WGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSFHQ----CGGNV 99 (495)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCST
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 3578999999999999999999432 223444 488999 999999999999999999 566664 3441
Q ss_pred -----hhhhhHHhhcCCCCCCCCCCC----------------------CChHHHHHHHHHHHHHHhc
Q 013811 142 -----KQYVNWARSQGQFLTSDDDFF----------------------RNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 142 -----~~y~~W~~~~G~~~~~~~~f~----------------------~~~~~~~~~~~~v~~iv~r 181 (436)
-..|.|..+.|.. +++-|| ......+.|.+|++.+.+.
T Consensus 100 GD~~~IPLP~WV~~~~~~--~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~ 164 (495)
T 1wdp_A 100 GDIVNIPIPQWVLDIGES--NHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFREN 164 (495)
T ss_dssp TCSCCBCSCHHHHHHHHH--CGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHH
T ss_pred CCcccccCCHHHHHhhcc--CCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 1346787653321 111222 2234468888888888877
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0022 Score=64.39 Aligned_cols=74 Identities=18% Similarity=0.408 Sum_probs=56.0
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEE--EEecccCCCCCCCh-
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKL--ILSLANNYDSFGGK- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~v--il~l~~~w~~~gg~- 141 (436)
++..++..|+.||++|+.-|-+.+. |-.++. .|++|| |..++++++.+++.||++ |+++|. +||.
T Consensus 29 ~~~~l~a~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlq~vmSFHq----CGgNV 97 (535)
T 2xfr_A 29 KGDELRAQLRKLVEAGVDGVMVDVW----WGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIMSFHQ----CGGNV 97 (535)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCST
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 3578999999999999999999442 223443 688999 999999999999999999 566664 3441
Q ss_pred -----hhhhhHHhh
Q 013811 142 -----KQYVNWARS 150 (436)
Q Consensus 142 -----~~y~~W~~~ 150 (436)
-..|.|..+
T Consensus 98 GD~~~IPLP~WV~e 111 (535)
T 2xfr_A 98 GDAVNIPIPQWVRD 111 (535)
T ss_dssp TCSCCBCSCHHHHH
T ss_pred CCcccccCCHHHHH
Confidence 134678765
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.23 Score=49.22 Aligned_cols=204 Identities=16% Similarity=0.110 Sum_probs=100.2
Q ss_pred hhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~ 189 (436)
++.+...+.++.++|--+.|+.|-.....|| +.|. ....+ .........-+.|..+++.|++.++.
T Consensus 111 ~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~-~~~~-----~~~~~---~~i~~Gg~~~~~~~~~id~iA~~l~~----- 176 (396)
T 2vx5_A 111 FEKMQHWIKAGYSRGGVITISWHVFNPVSGG-NSWD-----KTPAV---HELIPGGARHATLKAYLDTFVAFNEG----- 176 (396)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCCTTTSC-CTTC-----CCCCH---HHHSTTSTTHHHHHHHHHHHHHHHHT-----
T ss_pred hHHHHHHHHHHHHCCCeEEEEEeeCCCCCCC-CCcC-----chHHH---HHHhCCChhHHHHHHHHHHHHHHHHH-----
Confidence 5556666777788899899998742111122 1110 00000 00000000112445555555544222
Q ss_pred cCCC--------CcEEEEEeecCCCCCCC------CChHHHHHHHHHHHHHhhcc-CCCCEEEe-CCCcccC---CCCCc
Q 013811 190 YKDD--------PTIMAWELMNEPRCTSD------PSGRTIQAWITEMASYVKSI-DRNHLLEA-GLEGFYG---QSTPQ 250 (436)
Q Consensus 190 yk~~--------p~I~~weL~NEp~~~~~------~~~~~~~~w~~~~~~~Ir~~-Dp~~lV~v-G~~g~~~---~~~~~ 250 (436)
+++. |.|+ |-+..|.+.... .+++.+.+..+.+++++|+. .-+.++-+ ...+... .....
T Consensus 177 L~~~~~~G~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~ 255 (396)
T 2vx5_A 177 LADVDAQGNKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAG 255 (396)
T ss_dssp TCEECTTSCEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHH
T ss_pred hhhhhccCCccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccc
Confidence 4321 2344 789999986532 13678899999999999954 33455542 1111000 00000
Q ss_pred cccCCCCCcccchhhhhcCCCCcceEEeecCCCCC-CCC-CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC
Q 013811 251 RKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQW-LSS-SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD 328 (436)
Q Consensus 251 ~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w-~~~-~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~ 328 (436)
...++| | .+.+|++++-.|...- .+. .....-.+.+...+....+.++. .+||+.|+|+|.....
T Consensus 256 ~~~~YP----G--------DdyVDivG~D~Y~~~~~~~~~~~~~~f~~~~~~~~~~l~~~a~~-~~Kpial~E~G~~~~~ 322 (396)
T 2vx5_A 256 YLYGYP----G--------DAYVDIIGLDNYWDVGHEANTASADEQKAALTASLKQLVQIARS-KGKIAALTETGNNRLT 322 (396)
T ss_dssp HTTTCC----C--------GGGCSEEEEECCGGGTCTTCCSCHHHHHHHHHHHHHHHHHHHHH-HTCEEEEEEECCTTCC
T ss_pred hhhcCC----C--------CceEEEEEEeccCCCCCCccccchhhHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCCCCC
Confidence 012233 2 3569999999996411 110 01111111123334444444554 7999999999986542
Q ss_pred CCCChHHHHHHHHHHHHHH
Q 013811 329 PGYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 329 ~g~~~~~r~~~~~~~~~~i 347 (436)
.++.|.+.++..+
T Consensus 323 ------d~~~w~~~l~~~~ 335 (396)
T 2vx5_A 323 ------IDNFWTERLLGPI 335 (396)
T ss_dssp ------STTHHHHTTHHHH
T ss_pred ------chHHHHHHHHHHH
Confidence 1345555455544
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.035 Score=56.69 Aligned_cols=154 Identities=16% Similarity=0.217 Sum_probs=88.8
Q ss_pred hhhhHHHHHHHH--------HHCCCCEEEEcc-ccCC---CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEA--------ASHGLTVARTWA-FSDG---GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l--------~~~G~N~vRi~~-~~d~---~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-.-+.+.|+++ +++|+|+|=+-. +... +|. .+.|.-| ..+.|+.+|++|+++||+||
T Consensus 25 dl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~G-----t~~d~~~Lv~~aH~~Gi~Vi 99 (488)
T 1wza_A 25 DLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYG-----TLEDFHKLVEAAHQRGIKVI 99 (488)
T ss_dssp CHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEE
Confidence 445677889999 999999999843 2111 111 1111112 26788999999999999999
Q ss_pred Eecc-cCCCCC---------CChhhhhhHHhhcCC-C-C------------------------C-CCCCCCCChHHHHHH
Q 013811 129 LSLA-NNYDSF---------GGKKQYVNWARSQGQ-F-L------------------------T-SDDDFFRNPVVKGYY 171 (436)
Q Consensus 129 l~l~-~~w~~~---------gg~~~y~~W~~~~G~-~-~------------------------~-~~~~f~~~~~~~~~~ 171 (436)
+++. |+-..- +....|..|..-... + . . ..+-=+.+|.+++.+
T Consensus 100 lD~V~NH~s~~~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~~~pdln~~np~Vr~~i 179 (488)
T 1wza_A 100 IDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKV 179 (488)
T ss_dssp EECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHH
T ss_pred EEeccccccCccHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCCCCcccccCCHHHHHHH
Confidence 9985 321110 000112233210000 0 0 0 011124578999999
Q ss_pred HHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeC
Q 013811 172 KNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 172 ~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG 239 (436)
.+.++.++++ .+.| +-.+..+...... +......+++++.+.+|+..| .+++|
T Consensus 180 ~~~~~~Wl~~--gvDG---------fR~Da~~~i~~~~--~~~~~~~~~~~~~~~~~~~~p--~~~vg 232 (488)
T 1wza_A 180 IGIAKYWLKQ--GVDG---------FRLDGAMHIFPPA--QYDKNFTWWEKFRQEIEEVKP--VYLVG 232 (488)
T ss_dssp HHHHHHHHHT--TCCE---------EEEECCCTTSCGG--GTTHHHHHHHHHHHHHTTTSC--CEEEE
T ss_pred HHHHHHHHHc--CCCC---------hhHhhHhhhcccc--CcchHHHHHHHHHHHHhhcCC--CEEEE
Confidence 9999998875 3333 2234444322110 112456788999999999988 55555
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.05 Score=57.33 Aligned_cols=166 Identities=11% Similarity=0.187 Sum_probs=82.3
Q ss_pred hhHHHH-HHHHHHCCCCEEEEccccCC------CCCCC---ccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC-
Q 013811 68 SKVSTA-FHEAASHGLTVARTWAFSDG------GYRPL---QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY- 135 (436)
Q Consensus 68 ~~~~~~-l~~l~~~G~N~vRi~~~~d~------~~~~l---q~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w- 135 (436)
..+.+. ++.++++|+|+|=+....+. +|... .+.| .| ...+.|+.+|++|+++||+||+++. |+-
T Consensus 155 ~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~-~~--Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~ 231 (617)
T 1m7x_A 155 RELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTR-RF--GTRDDFRYFIDAAHAAGLNVILDWVPGHFP 231 (617)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECG-GG--SCHHHHHHHHHHHHHTTCEEEEEECTTSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCc-cC--CCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 344455 59999999999998432110 12111 1111 01 1267889999999999999999985 321
Q ss_pred ------CCCCChhhhhhHHhhcCCC--CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecC---
Q 013811 136 ------DSFGGKKQYVNWARSQGQF--LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE--- 204 (436)
Q Consensus 136 ------~~~gg~~~y~~W~~~~G~~--~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NE--- 204 (436)
..+.|.+.|..+....|.. .....-=+.+|++++.+.+.++..+++. .+.|-.+-.-..++..+-.-+
T Consensus 232 ~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~-gvDGfR~D~~~~~~~~d~~~~~g~ 310 (617)
T 1m7x_A 232 TDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERF-GIDALRVDAVASMIYRDYSRKEGE 310 (617)
T ss_dssp CSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHS-CCCEEEECCSHHHHCC--------
T ss_pred CccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHh-CcCEEEEcchhhhhhccccccccc
Confidence 1111111111000000100 0001112467899999999999999861 112211100011110000000
Q ss_pred --CCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 205 --PRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 205 --p~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+............+++++.+.||+..|+.++.
T Consensus 311 ~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~~i 345 (617)
T 1m7x_A 311 WIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTM 345 (617)
T ss_dssp ------CTTCCHHHHHHHHHHHHHHHHSSTTCEEE
T ss_pred cccccccccCCchHHHHHHHHHHHHHHHCCCeEEE
Confidence 111100112235678899999999999976543
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.043 Score=55.32 Aligned_cols=148 Identities=13% Similarity=0.133 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCC-C-------CCCccCC-CCCChh--hhhhHHHHHHHHHHcCCEEEEecccC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGG-Y-------RPLQRSP-GSYNEQ--MFKGLDFVIAEARKYGIKLILSLANN 134 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~-~-------~~lq~~p-g~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~~~ 134 (436)
+-..+.+.|+.++++|+|+|=+-...+.. . ...++.. -..++. ..+.|..++++|+++||+||+++.-+
T Consensus 28 ~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 28 NFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44667788999999999999984321100 0 0011110 011221 24678899999999999999998532
Q ss_pred CCCCCC----hhhhhhHHhhc--CCCCCCC-------CCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 135 YDSFGG----KKQYVNWARSQ--GQFLTSD-------DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 135 w~~~gg----~~~y~~W~~~~--G~~~~~~-------~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
+.++ ...++.|.... |...... +-=+.+|.+++.+.+.++.+++. +.|-++ +.
T Consensus 108 --H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~---vDGfRl---------Da 173 (449)
T 3dhu_A 108 --HTSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF---VDGYRC---------DV 173 (449)
T ss_dssp --EECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT---CSEEEE---------TT
T ss_pred --cCcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh---CCEEEE---------EC
Confidence 2222 11334454211 1100000 11135788999888888888764 444222 22
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 202 MNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 202 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
..+. ...+++++.+.+|+..|+..+.
T Consensus 174 a~~~----------~~~f~~~~~~~~~~~~p~~~~~ 199 (449)
T 3dhu_A 174 APLV----------PLDFWLEARKQVNAKYPETLWL 199 (449)
T ss_dssp GGGS----------CHHHHHHHHHHHHHHSTTCEEE
T ss_pred hhhC----------CHHHHHHHHHHHHhhCCCeEEE
Confidence 2211 2456778888889899987643
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.041 Score=55.91 Aligned_cols=146 Identities=16% Similarity=0.192 Sum_probs=84.6
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY 135 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w 135 (436)
+-..+.+.|+.++++|+|+|=+-...+ .+|. .+.+.-| ..+.|+.+|++|+++||+||+++. |+-
T Consensus 48 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~G-----t~~df~~lv~~~h~~Gi~VilD~V~NH~ 122 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILG-----GNEALRHLLEVAHAHGVRVILDGVFNHT 122 (475)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGT-----CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 445677889999999999999843211 1121 1112212 267889999999999999999985 321
Q ss_pred CCC----------CChhhhhhHHhhcCCCC------CC----------CCCCCCChHHHHHHHHHHHHHHhccccccccc
Q 013811 136 DSF----------GGKKQYVNWARSQGQFL------TS----------DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189 (436)
Q Consensus 136 ~~~----------gg~~~y~~W~~~~G~~~------~~----------~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~ 189 (436)
..- |....|..|..-.+.+. .. ++--+.+|.+++.+.+.++.+++
T Consensus 123 ~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~~--------- 193 (475)
T 2z1k_A 123 GRGFFAFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWIR--------- 193 (475)
T ss_dssp CTTSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHH---------
T ss_pred cCCCHHHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHHH---------
Confidence 110 00012334432111000 00 01124678999999999999884
Q ss_pred cCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 190 yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
++=+ -+-.+..++... ..+++++.+.+|+..|+.++
T Consensus 194 ~gvD--GfR~D~~~~~~~---------~~~~~~~~~~~~~~~p~~~~ 229 (475)
T 2z1k_A 194 FGVD--GWRLDVPNEIPD---------PTFWREFRQRVKGANPEAYI 229 (475)
T ss_dssp HTCC--EEEESSGGGCCC---------HHHHHHHHHHHHHHCTTCEE
T ss_pred CCCC--EEeecccccCCH---------HHHHHHHHHHHhhcCCCcEE
Confidence 3221 122445554321 13667778888888887554
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.092 Score=56.03 Aligned_cols=152 Identities=12% Similarity=0.147 Sum_probs=85.0
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccc-cCCCCC------CCc-------------cCCCCC---Ch--hhhhhHHHHHHH
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAF-SDGGYR------PLQ-------------RSPGSY---NE--QMFKGLDFVIAE 119 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~-~d~~~~------~lq-------------~~pg~~---~~--~~l~~lD~~i~~ 119 (436)
++-..+.+.|++++++|+|+|=+... ..+... .+. ..++.| ++ ...+.|+.+|++
T Consensus 250 Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~ 329 (695)
T 3zss_A 250 GTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTE 329 (695)
T ss_dssp CCHHHHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHH
Confidence 45567888899999999999998432 111000 000 000101 11 125788999999
Q ss_pred HHHcCCEEEEecccCCCCCCC-hhhhhhHHhhc--CCCC-C--CC-------CCCCCC--hHHHHHHHHHHHHHHhcccc
Q 013811 120 ARKYGIKLILSLANNYDSFGG-KKQYVNWARSQ--GQFL-T--SD-------DDFFRN--PVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg-~~~y~~W~~~~--G~~~-~--~~-------~~f~~~--~~~~~~~~~~v~~iv~r~n~ 184 (436)
|+++||+||+++.-+-..... ...++.|.... |... . .. +--|.+ |.+++...+.++.+++. .
T Consensus 330 aH~~GI~VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~~--G 407 (695)
T 3zss_A 330 AGKLGLEIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDH--G 407 (695)
T ss_dssp HHHTTCEEEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHCCCEEEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHHh--C
Confidence 999999999998643110000 11223343211 1100 0 00 011345 88999999999988863 2
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+.| +-.+..++ ....+++++.+.||+..|+.++.
T Consensus 408 VDG---------fRlD~a~~----------~~~~f~~~~~~~v~~~~pd~~~v 441 (695)
T 3zss_A 408 VRI---------FRVDNPHT----------KPVAFWERVIADINGTDPDVIFL 441 (695)
T ss_dssp CCE---------EEESSGGG----------SCHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCE---------EEecCcch----------hhHHHHHHHHHHHHhhCCCceEE
Confidence 222 12232221 12556788888899989986653
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=95.72 E-value=0.043 Score=56.03 Aligned_cols=149 Identities=15% Similarity=0.178 Sum_probs=83.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----CCCCCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc-cCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----GGYRPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA-NNYDSF 138 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~~ 138 (436)
+-.-+.+.|+.++++|+|+|=+-.+.+ .+|..... -..++. ..+.|+.+|++|+++||+||+++. |+-..-
T Consensus 54 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy--~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~ 131 (488)
T 2wc7_A 54 DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDY--YQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRG 131 (488)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEE--EEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCc--cccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCc
Confidence 345677889999999999999843211 11210000 001221 367889999999999999999985 321110
Q ss_pred C---------C-hhhhhhHHhhcCCCC--------CC----------CCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 139 G---------G-KKQYVNWARSQGQFL--------TS----------DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 139 g---------g-~~~y~~W~~~~G~~~--------~~----------~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
. + ...|..|..-.+.+. .. ++-=+.+|.+++.+.+.++..++. .+.|
T Consensus 132 ~~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl~~--gvDG--- 206 (488)
T 2wc7_A 132 FFFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWLKF--GIDG--- 206 (488)
T ss_dssp SHHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHH--TCCE---
T ss_pred CHHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHHHC--CCCE---
Confidence 0 0 012333432111000 00 011246789999999999998843 1222
Q ss_pred CCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
+-.+..++.... .+++++.+.+++..|+.++
T Consensus 207 ------fR~D~~~~i~~~---------~~~~~~~~~~~~~~p~~~~ 237 (488)
T 2wc7_A 207 ------WRLDVPFEIKTP---------GFWQEFRDRTKAINPEAYI 237 (488)
T ss_dssp ------EEESSGGGCCCT---------THHHHHHHHHHHHCTTCEE
T ss_pred ------EEEecccccChH---------HHHHHHHHHHHhhCCCeEE
Confidence 224455543211 2567777888888887543
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.039 Score=59.09 Aligned_cols=61 Identities=13% Similarity=0.260 Sum_probs=42.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccC---CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSD---GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d---~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
-.-+.+.|+.|+++|+|+|=+-. +.. .+|. .+.|.-| ..+.|+.+|++|+++||+||+++.
T Consensus 264 l~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~G-----t~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 264 LAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLG-----TMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp HHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEecc
Confidence 34567889999999999998833 211 1121 1122222 267789999999999999999985
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.14 Score=53.74 Aligned_cols=61 Identities=21% Similarity=0.224 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC--------CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD--------GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d--------~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
-.-+.+.|++++++|+|+|=+-.+.+ .+|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 147 l~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~G-----t~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 147 IRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYG-----SNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp HHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCC-----CHHHHHHHHHHHHHcCCEEEEEEC
Confidence 34577889999999999999833211 0121 1122222 256789999999999999999985
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.056 Score=56.03 Aligned_cols=160 Identities=16% Similarity=0.209 Sum_probs=88.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NN 134 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~ 134 (436)
+-.-+.+.|+.++++|+|+|=+-.+.+ .+|.. +.|.-| ..+.|+.+|++|+++||+||+++. |+
T Consensus 29 dl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~G-----t~~df~~lv~~~h~~Gi~VilD~V~NH 103 (543)
T 2zic_A 29 DLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFG-----NMADMDNLLTQAKMRGIKIIMDLVVNH 103 (543)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGC-----CHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 445677889999999999999843211 11211 111112 267889999999999999999985 32
Q ss_pred CCCC---------CChhhhhhHHhhcCCCC---------------------------CCCCCCCCChHHHHHHHHHHHHH
Q 013811 135 YDSF---------GGKKQYVNWARSQGQFL---------------------------TSDDDFFRNPVVKGYYKNLIKTV 178 (436)
Q Consensus 135 w~~~---------gg~~~y~~W~~~~G~~~---------------------------~~~~~f~~~~~~~~~~~~~v~~i 178 (436)
-..- ++...|..|..-...+. ...+-=+.+|++++.+.+.++.+
T Consensus 104 ~s~~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~W 183 (543)
T 2zic_A 104 TSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFW 183 (543)
T ss_dssp CCTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHH
T ss_pred ccccchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHHH
Confidence 1110 00112222321000000 00111256899999999999999
Q ss_pred HhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeC
Q 013811 179 LNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAG 239 (436)
Q Consensus 179 v~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG 239 (436)
++. .+.|-++-.-..|. .+.++|.+. +.+....+++++.+.+++ .|+ .+++|
T Consensus 184 l~~--GvDGfRlDa~~~i~--~~~~~~~~~---~~~~~~~~~~~~~~~v~~-~~~-~~~vg 235 (543)
T 2zic_A 184 IDK--GIGGFRMDVIDMIG--KIPAQHIVS---NGPKLHAYLKEMNAASFG-QHD-LLTVG 235 (543)
T ss_dssp HTT--TCCEEEETTGGGTT--CBGGGTBCS---SCTTHHHHHHHHHHHTGG-GSC-CEEEE
T ss_pred Hhc--CCCEEEECCcccee--ecCCCcccc---ccHHHHHHHHHHHHHHhc-cCC-eEEEe
Confidence 863 44452221111111 122333221 223467888999888887 565 34444
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.12 Score=51.68 Aligned_cols=132 Identities=17% Similarity=0.200 Sum_probs=79.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC---CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD---GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d---~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
+-.-+.+.|++++++|+|+|=+-.+.+ .+|. .+.|.-| .++.++.++++|+++||+||+++.-+ +
T Consensus 34 dl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~G-----t~~d~~~lv~~ah~~Gi~vilD~V~N--H 106 (424)
T 2dh2_A 34 NLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFG-----SKEDFDSLLQSAKKKSIRVILDLTPN--Y 106 (424)
T ss_dssp SHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEECCTT--T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCC-----CHHHHHHHHHHHHHCCCEEEEEECCC--c
Confidence 445677889999999999999843211 1111 1122222 26788999999999999999998633 2
Q ss_pred CCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeec-CCCCCCCCChHHH
Q 013811 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMN-EPRCTSDPSGRTI 216 (436)
Q Consensus 138 ~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~N-Ep~~~~~~~~~~~ 216 (436)
.+ . ..|.. -.+|++++.+.+.++..+++ .+.|-+ .+..+ -|. .
T Consensus 107 ~s-~---~~wF~------------~q~~~Vr~~~~~~~~~Wl~~--gvDGfR---------lD~v~~~~~---------~ 150 (424)
T 2dh2_A 107 RG-E---NSWFS------------TQVDTVATKVKDALEFWLQA--GVDGFQ---------VRDIENLKD---------A 150 (424)
T ss_dssp TS-S---STTCS------------SCHHHHHHHHHHHHHHHHHH--TCCEEE---------ECCGGGSTT---------H
T ss_pred CC-C---ccccc------------ccCHHHHHHHHHHHHHHHHc--CCCEEE---------EeccccCCc---------c
Confidence 22 1 12321 02467888888888888864 233311 22222 221 1
Q ss_pred HHHHHHHHHHhhccCCCCEEEeCC
Q 013811 217 QAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
..+++++.+.+++.+|+.++++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~i~~e 174 (424)
T 2dh2_A 151 SSFLAEWQNITKGFSEDRLLIAGT 174 (424)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEE
Confidence 234566666777888876555553
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.17 Score=54.13 Aligned_cols=163 Identities=12% Similarity=0.218 Sum_probs=83.5
Q ss_pred hHHHHH-HHHHHCCCCEEEEccccCC------CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCC
Q 013811 69 KVSTAF-HEAASHGLTVARTWAFSDG------GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNY 135 (436)
Q Consensus 69 ~~~~~l-~~l~~~G~N~vRi~~~~d~------~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w 135 (436)
.+.+.+ +.++++|+|+|-+....+. +|.. +.+.-| ..+.|..+|++|+++||+||+++. |+.
T Consensus 264 ~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yG-----t~~dfk~lV~~~H~~GI~VilD~V~NH~ 338 (722)
T 3k1d_A 264 QLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFG-----TPDDFRALVDALHQAGIGVIVDWVPAHF 338 (722)
T ss_dssp HHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCC-----CHHHHHHHHHHHHHcCCEEEEEEEeecc
Confidence 444555 9999999999998433211 1211 111112 157789999999999999999985 221
Q ss_pred C-------CCCChhhhhhHHhhcCCC--CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecC--
Q 013811 136 D-------SFGGKKQYVNWARSQGQF--LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE-- 204 (436)
Q Consensus 136 ~-------~~gg~~~y~~W~~~~G~~--~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NE-- 204 (436)
. .+.|.+.|..-....|.. .....-=+.+|++++...+.++.++++. .+.|-.+-.-..++..+..-+
T Consensus 339 ~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~-gvDGfR~Dav~~mly~d~~r~~g 417 (722)
T 3k1d_A 339 PKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEF-HIDGLRVDAVASMLYLDYSRPEG 417 (722)
T ss_dssp CCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHS-CCCEEEECCTHHHHBCCCCCCSS
T ss_pred CCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHh-CCCEEEEcchhhhhhcccccccc
Confidence 1 111211110000000000 0001112567999999999999999861 122211110001100000000
Q ss_pred ---CCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 205 ---PRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 205 ---p~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+............+++++.+.|++..|+.++.
T Consensus 418 ~w~~n~~gg~~n~~~~~fl~~l~~~v~~~~P~~~~i 453 (722)
T 3k1d_A 418 GWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTI 453 (722)
T ss_dssp CCSCCCSSCSBCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred ccccccCCCccChHHHHHHHHHHHHHHHhCCCeEEE
Confidence 111111111235678899999999999986554
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.2 Score=50.81 Aligned_cols=135 Identities=13% Similarity=0.198 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCChh-------hhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYNEQ-------MFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~~~-------~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
.-+.++-.+.+|+.|++.+=+-+ +-|| +.-....-..|+-. .-+.+..+.++|+++||++.+.++- |+
T Consensus 53 ~fd~~~w~~~~k~aGaky~v~takHHdG-f~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~-~d-- 128 (469)
T 3eyp_A 53 ALDCRQWMQTLKAAGIPAAILTAKHADG-FCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGP-HD-- 128 (469)
T ss_dssp SCCHHHHHHHHHHTTCCEEEEEEECTTC-CBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECS-SC--
T ss_pred cCCHHHHHHHHHHcCCCEEEEEEEeCCC-ccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeCh-hH--
Confidence 35678889999999999887743 2232 21111111112211 1267789999999999999998763 43
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
|.... ...|.++...+.+...+++++++ |+.- .++-++-.+.... +......
T Consensus 129 --------w~~~~-------~~~y~~~~Y~~~~~~Ql~ELlt~--------Yg~i-~~lW~Dg~~~~~~----~~~~~~~ 180 (469)
T 3eyp_A 129 --------RHEHL-------SPLYTTERYKEYYAHQLGELMSD--------YGKI-WETWWDGAGADEL----TTPVYRH 180 (469)
T ss_dssp --------HHHHT-------STTCCHHHHHHHHHHHHHHHHHS--------SCCC-CEEECCCTTCTTC----CHHHHHH
T ss_pred --------hCCCc-------CcccCcHHHHHHHHHHHHHHHhc--------CCcc-cEEEeCCCCCCCc----cchhHhH
Confidence 22110 12255678888999999999999 9842 2343444443321 2334556
Q ss_pred HHHHHHHHhhccCCCCEEE
Q 013811 219 WITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 219 w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|. +.||++.|+.+|.
T Consensus 181 w~----~~i~~~qP~~vi~ 195 (469)
T 3eyp_A 181 WY----KIVREKQPDCVIF 195 (469)
T ss_dssp HH----HHHHHHCTTCEEE
T ss_pred HH----HHHHHHCcCcEEe
Confidence 65 8899999998874
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.29 Score=52.36 Aligned_cols=147 Identities=19% Similarity=0.264 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC------------------------CCCCC---CccCCCCCCh------hhhhhHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD------------------------GGYRP---LQRSPGSYNE------QMFKGLD 114 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d------------------------~~~~~---lq~~pg~~~~------~~l~~lD 114 (436)
..+.+.|+.|+++|+|+|=+....+ -+|.. ..+. +.|.. ...+.|.
T Consensus 180 ~gi~~~L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~~~~~~wGY~~~~~~a~~-~~yg~~~~~~~~~~~efk 258 (714)
T 2ya0_A 180 EAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLT-GMYSSDPKNPEKRIAEFK 258 (714)
T ss_dssp HHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBSCSSSBC-STTSSCTTSTTHHHHHHH
T ss_pred HHHHHHhHHHHHcCCCEEEECCcccccccCcccccccccccccCcCcCccCCCCccCcccC-hhhccCCCCccchHHHHH
Confidence 4456679999999999999943211 01111 1111 11211 2368899
Q ss_pred HHHHHHHHcCCEEEEecccCCCCCCChhhh----hhHHh---hcCCCCC---CCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 115 FVIAEARKYGIKLILSLANNYDSFGGKKQY----VNWAR---SQGQFLT---SDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 115 ~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y----~~W~~---~~G~~~~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
.+|++|+++||+||+++.-+ +.+....| +.|.. ..|.... ...--+.++.+++.+.+.++.+++.
T Consensus 259 ~lV~~~H~~Gi~VilDvV~N--H~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e--- 333 (714)
T 2ya0_A 259 NLINEIHKRGMGAILDVVYN--HTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT--- 333 (714)
T ss_dssp HHHHHHHHTTCEEEEEECTT--BCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHCCCEEEEEeccC--cccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh---
Confidence 99999999999999998632 22221111 11110 0010000 0001124688899999999999986
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|.=+ . +-++++.+. . ..+++++...+++.+|+..+.
T Consensus 334 -----~~vD-G-fR~D~~~~~------~----~~~~~~~~~~~~~~~p~~~li 369 (714)
T 2ya0_A 334 -----YKVD-G-FRFDMMGDH------D----AASIEEAYKAARALNPNLIML 369 (714)
T ss_dssp -----HCCC-E-EEETTGGGS------B----HHHHHHHHHHHHHHCTTCEEE
T ss_pred -----hCce-E-EEEeCCCCC------C----HHHHHHHHHHHHHhCCCeEEE
Confidence 4322 1 223444321 1 223456667778889975443
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.26 Score=50.00 Aligned_cols=136 Identities=13% Similarity=0.172 Sum_probs=85.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCChh-------hhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYNEQ-------MFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~~~-------~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
.-+.++-.+.+|+.|++.|=+-. +-|| +.-....-..|+-. .-+.+..++++|+++||++-+.+.- |+++
T Consensus 61 ~fd~~~W~~~~k~aGakyvvlt~kHHdG-F~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~-~d~~ 138 (478)
T 3ues_A 61 NVDVDQWMDALVAGGMAGVILTCKHHDG-FCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSP-WDRT 138 (478)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEEEECTTC-CBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECS-CCSS
T ss_pred cCCHHHHHHHHHHcCCCEEEEeEEecCC-ccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeCh-HHhC
Confidence 35678889999999999887743 2232 21111111112110 1366789999999999999998743 4331
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecC--CCCCCCCChHHH
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE--PRCTSDPSGRTI 216 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NE--p~~~~~~~~~~~ 216 (436)
+..+-+++...+.+...+++++++ |+... ++-++-.+. |.... ..
T Consensus 139 -------------------~~~y~~~~~y~~~~~~ql~EL~~~--------Yg~~~-~~W~Dg~~~~~~~~~~-----~~ 185 (478)
T 3ues_A 139 -------------------EESYGKGKAYDDFYVGQLTELLTQ--------YGPIF-SVWLDGANGEGKNGKT-----QY 185 (478)
T ss_dssp -------------------CTTTTSSHHHHHHHHHHHHHHHHS--------SSCCS-EEEECCCCCCCTTSCC-----CC
T ss_pred -------------------CcccCchHHHHHHHHHHHHHHHhc--------CCcce-EEEeeCCCCCCCccch-----hh
Confidence 011223567788899999999999 97632 444565552 11110 01
Q ss_pred HHHHHHHHHHhhccCCCCEEEe
Q 013811 217 QAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
..| .++.+.||++.|+.+|..
T Consensus 186 ~~~-~~~~~~i~~~qP~~vi~~ 206 (478)
T 3ues_A 186 YDW-DRYYNVIRSLQPDAVISV 206 (478)
T ss_dssp CCH-HHHHHHHHHHCTTSEEEE
T ss_pred hhH-HHHHHHHHHHCcCEEEEC
Confidence 123 578899999999998864
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.07 Score=56.52 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-cc---CCCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FS---DGGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~---d~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
-.-+.+-|+.||++|+|+|=+-. +. +.+|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 238 l~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~G-----t~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 238 LIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLG-----GDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp HHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGT-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccC-----CHHHHHHHHHHhhhcCCEEEEEec
Confidence 34467889999999999999833 21 11121 1222222 256789999999999999999985
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.47 Score=51.85 Aligned_cols=148 Identities=17% Similarity=0.173 Sum_probs=82.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC-------------------C----CCC-----CCccCCCC---CChhhhhhHHHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD-------------------G----GYR-----PLQRSPGS---YNEQMFKGLDFV 116 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d-------------------~----~~~-----~lq~~pg~---~~~~~l~~lD~~ 116 (436)
..+.+.|+.++++|+|+|=+....+ . +|. .+.+.-|. .....++.|+.+
T Consensus 296 ~gl~~~L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynwGY~~~~~~a~~~~yGt~p~~~~~~~~efk~l 375 (877)
T 3faw_A 296 AAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQL 375 (877)
T ss_dssp HHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCSBSCSSSBCSTTCSCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcchhcccccccccccccccccCCCCCCccCcCcCccccccccccCCCCCcchHHHHHHHH
Confidence 4567779999999999999843211 0 011 11111111 001236789999
Q ss_pred HHHHHHcCCEEEEecccCCCCCCChhhh----hhHH---hhcCCCCC---CCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 117 IAEARKYGIKLILSLANNYDSFGGKKQY----VNWA---RSQGQFLT---SDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 117 i~~a~~~Gi~vil~l~~~w~~~gg~~~y----~~W~---~~~G~~~~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
|++|+++||+||+++.-+ +.+....+ +.|. ...|.... ...--+.+|.+++...+.++.+++.
T Consensus 376 V~~~H~~GI~VILDvV~N--H~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e----- 448 (877)
T 3faw_A 376 IHDIHKRGMGVILDVVYN--HTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE----- 448 (877)
T ss_dssp HHHHHHTTCEEEEEECTT--CCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHcCCEEEEEEeec--cccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH-----
Confidence 999999999999998532 12211111 1111 01111000 0011135688999999999999986
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|.=+ -+-++++... ...+++++...+++.+|+.++.
T Consensus 449 ---~gVD--GFRfD~a~~~----------~~~~~~~~~~~~~~~~P~~~li 484 (877)
T 3faw_A 449 ---FKVD--GFRFDMMGDH----------DAAAIELAYKEAKAINPNMIMI 484 (877)
T ss_dssp ---HCCC--EEEETTGGGS----------BHHHHHHHHHHHHHHCTTCEEE
T ss_pred ---cCCc--EEEEecCCcC----------CHHHHHHHHHHHHhhCCCcEEE
Confidence 4322 2334554211 1334566777788889975544
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.032 Score=57.54 Aligned_cols=62 Identities=18% Similarity=0.332 Sum_probs=44.1
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccc-c----CCCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAF-S----DGGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~-~----d~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+-|++||++|+|+|=+-.+ . +.+|. .+.|.-| ..+.|+.+|++|+++||+||+++.
T Consensus 30 dl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~G-----t~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 30 DLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYG-----TMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp CHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4455677799999999999998332 1 11221 1222223 256789999999999999999985
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=94.53 E-value=0.43 Score=48.13 Aligned_cols=140 Identities=11% Similarity=0.073 Sum_probs=85.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEccc-cCCCCCCCccCCCCCChh----hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAF-SDGGYRPLQRSPGSYNEQ----MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKK 142 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~-~d~~~~~lq~~pg~~~~~----~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~ 142 (436)
-+.++-.+.+|+.|++.|=+-+- -|| +.-....-..|+-. .-+.+.+++++|+++||++-+.++- |+++ .+
T Consensus 78 fDp~~Wa~~~k~AGakyvvlTaKHHDG-F~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~-~dw~--~p 153 (450)
T 2wvv_A 78 FDAKKWAKMAKEMGTKYVKITTKHHEG-FCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSV-MDWS--NP 153 (450)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEEECTTC-CBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEES-CCTT--CT
T ss_pred CCHHHHHHHHHHcCCcEEEEEEeecCC-ccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecH-HHhc--CC
Confidence 46778899999999998887442 232 21111111112211 1467789999999999999999764 4332 01
Q ss_pred hhhhHHhhcCCCCCCCCCCC----CChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 143 QYVNWARSQGQFLTSDDDFF----RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 143 ~y~~W~~~~G~~~~~~~~f~----~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
.|.. +..+- ..+...+.+...+++|+++ |+ +|.++-++-.++..+ ....-
T Consensus 154 ~y~~-----------~~~~~~~~~~~~~y~~~~~~Ql~ELlt~--------YG-~~d~lWfDg~~~~~~------~~~~~ 207 (450)
T 2wvv_A 154 DYRY-----------DIKSKEDSIAFSRFLEFTDNQLKELATR--------YP-TVKDFWFDGTWDASV------KKNGW 207 (450)
T ss_dssp TCCS-----------SCCSHHHHHHHHHHHHHHHHHHHHHHHH--------CT-TCCEEEEESCCSHHH------HHTHH
T ss_pred cccc-----------cccccccccchHHHHHHHHHHHHHHHHc--------CC-CcCEEEEcCCCCcCc------chhhH
Confidence 1110 00000 0135567788889999999 85 577776776443211 11122
Q ss_pred HHHHHHHHhhccCCCCEEE
Q 013811 219 WITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 219 w~~~~~~~Ir~~Dp~~lV~ 237 (436)
...++.+.||++.|+.+|.
T Consensus 208 ~~~~~~~~i~~~qP~~vv~ 226 (450)
T 2wvv_A 208 WTAHAEQMLKELVPGVAIN 226 (450)
T ss_dssp HHHHHHHHHHHHSTTCEEB
T ss_pred HHHHHHHHHHHhCCcEEEE
Confidence 3578889999999988775
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=94.09 E-value=0.063 Score=53.98 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=44.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-..+.+.|+.++++|+|+|=+-...+ .+|. .+.|.-| ..+.|+.+|++|+++||+||+++.
T Consensus 21 d~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~G-----t~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 21 DFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYG-----SEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp CHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEeC
Confidence 446677889999999999999843211 1121 1222223 267889999999999999999985
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=0.11 Score=51.69 Aligned_cols=62 Identities=18% Similarity=0.174 Sum_probs=44.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----CCCC-----CCc-cCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----GGYR-----PLQ-RSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~-----~lq-~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-..+.+.|+.++++|+|+|=+....+ .+|. .+. +.-| ..+.|..++++|+++||+||+++.
T Consensus 19 ~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~G-----t~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYG-----NAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 446677889999999999999843211 1121 222 2223 257789999999999999999985
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.96 Score=48.40 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=79.3
Q ss_pred HHHHHHHCCCCEEEEcc-cc--C-----------CCCCC-----CccCCCCCCh----hhhhhHHHHHHHHHHcCCEEEE
Q 013811 73 AFHEAASHGLTVARTWA-FS--D-----------GGYRP-----LQRSPGSYNE----QMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~-~~--d-----------~~~~~-----lq~~pg~~~~----~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.|+.||++|+|+|=+.. +. . -+|.. ++++-|. ++ ...+.|+.+|++|+++||+||+
T Consensus 256 ~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~-~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 256 GLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYAS-NPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp HHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSS-CSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCccccc-CCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 69999999999999843 21 1 11211 1111111 11 1368899999999999999999
Q ss_pred ecccCCCCCCChh--hhh----hHHh---hcCCCCC----CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcE
Q 013811 130 SLANNYDSFGGKK--QYV----NWAR---SQGQFLT----SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196 (436)
Q Consensus 130 ~l~~~w~~~gg~~--~y~----~W~~---~~G~~~~----~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I 196 (436)
++.-+ +.+... .+. .|.- ..|.... ..+--+.+|.+++.+.+.++..+++ |.=+ =
T Consensus 335 DvV~N--Ht~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e--------~gVD--G 402 (718)
T 2e8y_A 335 DVVFN--HVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEE--------YNVD--G 402 (718)
T ss_dssp EECTT--CCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHH--------HCCC--E
T ss_pred EEecc--cccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHH--------hCCC--E
Confidence 98532 222211 111 1100 0011000 0011245789999999999999986 3222 1
Q ss_pred EEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 197 MAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 197 ~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
+-+++.+... ..+++++.+.+++.+|+.++
T Consensus 403 fR~D~~~~~~----------~~~~~~~~~~~~~~~p~~~l 432 (718)
T 2e8y_A 403 FRFDLLGILD----------IDTVLYMKEKATKAKPGILL 432 (718)
T ss_dssp EEETTGGGSB----------HHHHHHHHHHHHHHSTTCEE
T ss_pred EEEeccccCC----------HHHHHHHHHHHHHhCCCeEE
Confidence 2244443321 23457777888888887543
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.21 Score=51.53 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC--------------CCCC--CCc--cCCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD--------------GGYR--PLQ--RSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d--------------~~~~--~lq--~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.-+.+.|+.|+++|+|+|=+-...+ .+|. .+. |.-| ..+.|+.+|++|+++||+||+
T Consensus 37 ~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~G-----t~~dfk~Lv~~aH~~GI~Vil 111 (527)
T 1gcy_A 37 NILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYG-----SDAQLRQAASALGGAGVKVLY 111 (527)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSC-----CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCC-----CHHHHHHHHHHHHHCCCEEEE
Confidence 5677889999999999998843221 0111 112 1112 267889999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 112 D~V 114 (527)
T 1gcy_A 112 DVV 114 (527)
T ss_dssp EEC
T ss_pred EEe
Confidence 985
|
| >1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 | Back alignment and structure |
|---|
Probab=93.26 E-value=3.2 Score=40.47 Aligned_cols=145 Identities=13% Similarity=0.182 Sum_probs=87.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-------------CCC----------CCChhhhhhHHHHHHHHHHc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-------------SPG----------SYNEQMFKGLDFVIAEARKY 123 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-------------~pg----------~~~~~~l~~lD~~i~~a~~~ 123 (436)
.+.+++.++.|+..++|++-++.-.+-+|+ ++. ..| .|. -+.+.++++-|+++
T Consensus 32 ~~~ik~~id~mA~~KlN~lH~HltDdq~~r-le~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT---~~di~eiv~YA~~r 107 (367)
T 1yht_A 32 PEVIKSFIDTISLSGGNFLHLHFSDHENYA-IESHLLNQRAENAVQGKDGIYINPYTGKPFLS---YRQLDDIKAYAKAK 107 (367)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBSSSCBC-BCBTTTTBCGGGSEECTTSCEECTTTCCEEBC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEEcCCCce-eeecchhhhhhhhccccCCCcCCCCCCCCCcC---HHHHHHHHHHHHHc
Confidence 478999999999999999998654332342 221 112 244 35678999999999
Q ss_pred CCEEEEecccCCCCCCChhhhhhHHhh---------cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-C
Q 013811 124 GIKLILSLANNYDSFGGKKQYVNWARS---------QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-D 193 (436)
Q Consensus 124 Gi~vil~l~~~w~~~gg~~~y~~W~~~---------~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-~ 193 (436)
||.||+.+-. .|-......+... .........--.++|+..+..++.+++++.- |.+ .
T Consensus 108 gI~VIPEID~----PGH~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~l--------Fp~~s 175 (367)
T 1yht_A 108 GIELIPELDS----PNHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDI--------FGDTS 175 (367)
T ss_dssp TCEEEEEEEE----SSSCHHHHHHHHHHHCHHHHHHHBCSSCTTSBCTTCHHHHHHHHHHHHHHHHH--------HGGGC
T ss_pred CCEEEEeccc----hHHHHHHHHhcccccCcccccccCCCCCCceeCCCCHHHHHHHHHHHHHHHHh--------cCCCc
Confidence 9999998732 1222221111100 0000001111235788888888888888886 543 1
Q ss_pred CcEEEEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccC
Q 013811 194 PTIMAWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 194 p~I~~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
+- +-| +-|.... +...+.+..|++++.+.+++..
T Consensus 176 ~~---iHiGgDE~~~~-~~~~~~~~~f~~~~~~~v~~~g 210 (367)
T 1yht_A 176 QH---FHIGGDEFGYS-VESNHEFITYANKLSYFLEKKG 210 (367)
T ss_dssp SE---EEEECCSCCTT-SCCHHHHHHHHHHHHHHHHHTT
T ss_pred cE---EEeCCcccccc-ccchHHHHHHHHHHHHHHHHCC
Confidence 22 233 2344321 2235678889999999999874
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.99 Score=50.24 Aligned_cols=147 Identities=19% Similarity=0.257 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC------------------------CCCCC---CccCCCCCCh------hhhhhHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD------------------------GGYRP---LQRSPGSYNE------QMFKGLD 114 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d------------------------~~~~~---lq~~pg~~~~------~~l~~lD 114 (436)
..+.+.|+.|+++|+|+|=+....+ -+|.. +.+. +.|.. ...+.|.
T Consensus 487 ~gl~~~LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~~~~y~~~~~~ynwGY~~~~y~a~~-~~ygt~p~~~~~~~~efk 565 (1014)
T 2ya1_A 487 EAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLT-GMYSSDPKNPEKRIAEFK 565 (1014)
T ss_dssp HHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBSCSSSBC-STTCSCTTCTTHHHHHHH
T ss_pred HHHHHHhHHHHHcCCCeEEecCcccccccccccccccccccccCcCCcccCCCcCcCcccc-ccccCCCccccchHHHHH
Confidence 4455679999999999999943211 01111 1111 11211 2368899
Q ss_pred HHHHHHHHcCCEEEEecccCCCCCCChhhh----hhHHh---hcCCCCC---CCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 115 FVIAEARKYGIKLILSLANNYDSFGGKKQY----VNWAR---SQGQFLT---SDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 115 ~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y----~~W~~---~~G~~~~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
.||++|+++||+||+++.-+ +.+....| +.|.. ..|.... ...--+.+|.+++.+.+.++.++++
T Consensus 566 ~lV~~~H~~GI~VIlDvV~N--Ht~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~e--- 640 (1014)
T 2ya1_A 566 NLINEIHKRGMGAILDVVYN--HTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT--- 640 (1014)
T ss_dssp HHHHHHHTTTCEEEEEECTT--CCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHcCCEEEEEEecc--ccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHHh---
Confidence 99999999999999998532 22221111 11111 0011000 0011124688899999999999986
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|.=+ =+-++++.+. . ...++++...+++.+|+.++.
T Consensus 641 -----~gvD--GfR~D~~~~~------~----~~~~~~~~~~~~~~~p~~~li 676 (1014)
T 2ya1_A 641 -----YKVD--GFRFDMMGDH------D----AASIEEAYKAARALNPNLIML 676 (1014)
T ss_dssp -----HCCC--EEEETTGGGS------B----HHHHHHHHHHHHHHCTTCEEE
T ss_pred -----cCce--EEEEeCCCCC------C----HHHHHHHHHHHHHhCCCeEEE
Confidence 4322 1224444321 1 123456667788889975543
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=93.09 E-value=0.22 Score=52.38 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=64.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----C--CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-c
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----G--GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-N 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~ 133 (436)
+-..+.+.|+.++++|+|+|-+....+ . +|.. +.+.-| ..+.|..+|++|+++||+||+++. |
T Consensus 152 ~~~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G-----~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 152 TFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYG-----TPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp SHHHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcC-----CHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 345567789999999999999844311 1 1211 112222 256789999999999999999985 3
Q ss_pred CCCCCC-Chhhhh-hHHhhcC-CCCCCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 134 NYDSFG-GKKQYV-NWARSQG-QFLTSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 134 ~w~~~g-g~~~y~-~W~~~~G-~~~~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
+...-+ ....|. .|..... ..... .--|.+|.+++.+.+.++.+++.
T Consensus 227 H~~~~~~~~~~~~~~~~~~~~~~~wg~-~ln~~~p~V~~~i~~~~~~w~~~ 276 (618)
T 3m07_A 227 HFGPEGNYLPLLAPAFFHKERMTPWGN-GIAYDVDAVRRYIIEAPLYWLTE 276 (618)
T ss_dssp CCCSSSCCHHHHCGGGEEEEEEETTEE-EECTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccccccCchhhcCCCCCCCCC-CcCCCCHHHHHHHHHHHHHHHHH
Confidence 221100 011111 1111000 00000 11246799999999999999965
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=93.02 E-value=0.88 Score=50.13 Aligned_cols=142 Identities=14% Similarity=0.193 Sum_probs=78.3
Q ss_pred HHHHHHHCCCCEEEEcc-c--cCC----------CCCCC-----ccCCCC--CChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 73 AFHEAASHGLTVARTWA-F--SDG----------GYRPL-----QRSPGS--YNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 73 ~l~~l~~~G~N~vRi~~-~--~d~----------~~~~l-----q~~pg~--~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.|+.|+++|+|+|=+.. + ... +|... +++-+. +-....+.|+.||++|+++||+||+++.
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDvV 553 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDVV 553 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEEc
Confidence 49999999999999843 2 110 11110 000010 1112267899999999999999999985
Q ss_pred -cCCCCCCChhhhh----hHHh---hcCCCCCC-----CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEE
Q 013811 133 -NNYDSFGGKKQYV----NWAR---SQGQFLTS-----DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199 (436)
Q Consensus 133 -~~w~~~gg~~~y~----~W~~---~~G~~~~~-----~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~w 199 (436)
|+-.. ++...+. .|.- ..|. ..+ .+--+.+|.+++.+.+.++..++. |.=+ =+-+
T Consensus 554 ~NHt~~-~~~~~f~~~~p~y~~~~~~~g~-~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e--------~gVD--GfR~ 621 (921)
T 2wan_A 554 YNHTFD-VMVSDFDKIVPQYYYRTDSNGN-YTNGSGCGNEFATEHPMAQKFVLDSVNYWVNE--------YHVD--GFRF 621 (921)
T ss_dssp TTCCSC-SSSSHHHHHSTTTTBCBCTTSC-BCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHH--------HCCC--EEEE
T ss_pred cccccc-cccccccCCCCCeEEEcCCCCc-ccCCCCcccccccCCHHHHHHHHHHHHHHHHH--------cCCC--EEEe
Confidence 33211 1100111 0100 0010 000 011245789999999999999975 4222 1223
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 200 ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 200 eL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
+++... ...+++++.+.+++++|+.++
T Consensus 622 Da~~~~----------~~~~~~~~~~~l~~~~p~~~l 648 (921)
T 2wan_A 622 DLMALL----------GKDTMAKISNELHAINPGIVL 648 (921)
T ss_dssp TTGGGG----------CHHHHHHHHHHHHHHCTTCEE
T ss_pred cccccc----------CHHHHHHHHHHHHHhCCceEE
Confidence 444321 134567778888888997554
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=92.86 E-value=0.11 Score=53.89 Aligned_cols=63 Identities=17% Similarity=0.362 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccc-c----CCCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAF-S----DGGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~-~----d~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+.|+.++++|+|+|=+-.+ . +.+|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~G-----t~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYG-----TMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34466778899999999999998432 1 11221 1222223 267889999999999999999985
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=92.62 E-value=1.1 Score=44.20 Aligned_cols=129 Identities=12% Similarity=0.071 Sum_probs=70.1
Q ss_pred EEeecCCCCCCC------CChHHHHHHHHHHHHHhhc-cCCCCEEEeC-CCcccCCCCCccccCCCCCcccchhhhhcCC
Q 013811 199 WELMNEPRCTSD------PSGRTIQAWITEMASYVKS-IDRNHLLEAG-LEGFYGQSTPQRKRVNPNLDIGTDFVANNLI 270 (436)
Q Consensus 199 weL~NEp~~~~~------~~~~~~~~w~~~~~~~Ir~-~Dp~~lV~vG-~~g~~~~~~~~~~~~np~~~~g~df~~~~~~ 270 (436)
|-+..|.+.... .+++.+.+..+.+++++|+ ..-+.++-+= ..+...........++|+ .
T Consensus 170 ~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPG------------D 237 (386)
T 1odz_A 170 FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPG------------D 237 (386)
T ss_dssp EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCC------------T
T ss_pred EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCccchhhcCCC------------C
Confidence 788899886421 1367899999999999994 4445565431 111000000000123442 3
Q ss_pred CCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC--CCCChHHHHHHHHHHHHHH
Q 013811 271 PGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD--PGYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 271 ~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~--~g~~~~~r~~~~~~~~~~i 347 (436)
+.+|++++-.|...-. ...+. +-+...+....+.++. .+||+.|+|+|..... .| .....|+..+++.+
T Consensus 238 dyVDivG~D~Y~~~~~-~~~f~---~~~~~~l~~~~~~A~~-~~Kpial~E~G~~~~~p~~G---~~d~~W~~~l~~~l 308 (386)
T 1odz_A 238 EWVDVLGFDTYGPVAD-NADWF---RNVVANAALVARMAEA-RGKIPVISGIGIRAPDIEAG---LYDNQWYRKLISGL 308 (386)
T ss_dssp TTCSEECCEEEECSSS-CHHHH---HHHHHHHHHHHHHHHH-HTCEECBCEEEECHHHHHTT---CCCTTHHHHHHHHH
T ss_pred CeEEEEEEeccCCCCC-CccHH---HHHHHHHHHHHHHhhc-CCCeEEEEeccCCCCCcccc---ccchHHHHHHHHHH
Confidence 5799999999964211 10111 1122223334444544 7999999999985431 11 01346777666654
|
| >1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* | Back alignment and structure |
|---|
Probab=92.36 E-value=7.4 Score=39.70 Aligned_cols=143 Identities=13% Similarity=0.147 Sum_probs=87.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCC-------CCc---------cC-CCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYR-------PLQ---------RS-PGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~-------~lq---------~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.+.+++.|+.|+.+++|++-++.-.+-+|+ .+. .. .|.|.+ +.+.++++.|+++||.||.
T Consensus 173 ~~~ik~~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~---~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 173 VDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTK---AEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCH---HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCccccCCCCCCCCCH---HHHHHHHHHHHHcCCEEEE
Confidence 478999999999999999998654333342 110 00 144664 5678999999999999999
Q ss_pred ecccCCCCCCChh----hhhhHHhhcCCCCC--------CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEE
Q 013811 130 SLANNYDSFGGKK----QYVNWARSQGQFLT--------SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197 (436)
Q Consensus 130 ~l~~~w~~~gg~~----~y~~W~~~~G~~~~--------~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~ 197 (436)
.+-. .|-.. .|+.-.. .|.... ...-..++|+..+..++.+++++.- |.. +
T Consensus 250 EID~----PGH~~a~l~aypeL~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~l--------Fp~-~--- 312 (512)
T 1jak_A 250 EIDM----PGHTNAALASYAELNC-DGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAAL--------TPG-R--- 312 (512)
T ss_dssp ECCC----SSSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHT--------CCS-S---
T ss_pred ccCC----CchHHHHHHhCHHhcC-cCCCCccccccCcCCcccCCCCHHHHHHHHHHHHHHHHh--------CCC-C---
Confidence 8732 12221 2332211 111100 0011235788888888888888875 432 2
Q ss_pred EEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 198 AWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 198 ~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
.+-| +-|.... ..+....|++++.+.+++...
T Consensus 313 ~iHiGgDE~~~~---~~~l~~~f~~~v~~~v~~~Gk 345 (512)
T 1jak_A 313 YLHIGGDEAHST---PKADFVAFMKRVQPIVAKYGK 345 (512)
T ss_dssp EEECCCCCCTTS---CHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEECCcccccc---hHHHHHHHHHHHHHHHHhcCC
Confidence 2333 2333221 346678899999999998753
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=92.32 E-value=0.27 Score=49.96 Aligned_cols=68 Identities=12% Similarity=0.154 Sum_probs=44.7
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC------CCCCCCcc-CCCC------CChh--hhhhHHHHHHHHHHcCCEEEE
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD------GGYRPLQR-SPGS------YNEQ--MFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d------~~~~~lq~-~pg~------~~~~--~l~~lD~~i~~a~~~Gi~vil 129 (436)
++-..+.+.|+.|+++|+|+|=+....+ .+|..... .++. .++. ..+.|+.+|++|+++||+||+
T Consensus 18 G~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~Vil 97 (483)
T 3bh4_A 18 QHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456678889999999999999843211 11211000 0111 1221 267889999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 98 D~V 100 (483)
T 3bh4_A 98 DVV 100 (483)
T ss_dssp EEC
T ss_pred EEc
Confidence 985
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=92.27 E-value=0.31 Score=50.00 Aligned_cols=68 Identities=16% Similarity=0.114 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC------CCCCCCcc-CCCC------CCh--hhhhhHHHHHHHHHHcCCEEEE
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD------GGYRPLQR-SPGS------YNE--QMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d------~~~~~lq~-~pg~------~~~--~~l~~lD~~i~~a~~~Gi~vil 129 (436)
++-..+.+.|+.++++|+|+|=+....+ .+|..... ..+. .++ ...+.|+.+|++|+++||+||+
T Consensus 21 G~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~Vil 100 (515)
T 1hvx_A 21 TLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYA 100 (515)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3446677889999999999999843211 11211000 0111 111 1267789999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 101 D~V 103 (515)
T 1hvx_A 101 DVV 103 (515)
T ss_dssp EEC
T ss_pred EEe
Confidence 985
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=92.26 E-value=0.27 Score=49.97 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=45.0
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC------CCCCCCcc-CCCC------CChh--hhhhHHHHHHHHHHcCCEEEE
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD------GGYRPLQR-SPGS------YNEQ--MFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d------~~~~~lq~-~pg~------~~~~--~l~~lD~~i~~a~~~Gi~vil 129 (436)
++-..+.+.|+.|+++|+|+|=+....+ .+|..... .+|. .++. ..+.|+.+|++|+++||+||+
T Consensus 22 G~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~Vil 101 (485)
T 1wpc_A 22 NHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYG 101 (485)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456677889999999999999843211 12211100 1111 1221 267889999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 102 D~V 104 (485)
T 1wpc_A 102 DVV 104 (485)
T ss_dssp EEC
T ss_pred EEe
Confidence 985
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=92.19 E-value=0.28 Score=49.71 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=45.0
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC---C---CCCCCcc-CCCC------CChh--hhhhHHHHHHHHHHcCCEEEE
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD---G---GYRPLQR-SPGS------YNEQ--MFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d---~---~~~~lq~-~pg~------~~~~--~l~~lD~~i~~a~~~Gi~vil 129 (436)
++-..+.+.|+.++++|+|+|=+....+ + +|..... .++. .++. ..+.|+.+|++|+++||+||+
T Consensus 20 G~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 99 (480)
T 1ud2_A 20 QHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYG 99 (480)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456678889999999999999843211 1 1211000 1111 1221 267889999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 100 D~V 102 (480)
T 1ud2_A 100 DVV 102 (480)
T ss_dssp EEC
T ss_pred EEc
Confidence 985
|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=92.18 E-value=1.9 Score=43.17 Aligned_cols=130 Identities=18% Similarity=0.152 Sum_probs=78.3
Q ss_pred hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 109 MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 109 ~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
.|+.-+..|..++++|++|+|++-..|.. .| ...+ ++..++.|.+-+..+++.
T Consensus 226 ~L~~~~~~v~~lq~~glKVllSIgGg~~~-~g-----------------f~~l--s~~~r~~Fa~~v~~~v~~------- 278 (451)
T 3poh_A 226 LLDNNETLLQPLRRRGVKVLLGLLGNHDI-TG-----------------LAQL--SEQGAKDFAREVAQYCKA------- 278 (451)
T ss_dssp HHHTHHHHTHHHHHTTCEEEEEEECCSSS-CC-----------------TTCB--CHHHHHHHHHHHHHHHHH-------
T ss_pred hhhChHHHHHHHHHCCCEEEEEECcCCCC-CC-----------------cccC--CHHHHHHHHHHHHHHHHH-------
Confidence 45555899999999999999998543321 11 1122 578889999999999998
Q ss_pred ccCCCCcEEEEEeecCCCC--C--CCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchh
Q 013811 189 HYKDDPTIMAWELMNEPRC--T--SDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDF 264 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~--~--~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df 264 (436)
|+=|--=+=||--+.+.. . ..++.+.+..+++++.+++ |+.+|++...|.-.. . ...|.
T Consensus 279 -yglDGIDiDwEYp~~~~~g~~~~~~~d~~nf~~Ll~eLR~~l----p~kllT~A~~g~~~~-~-----------~~~d~ 341 (451)
T 3poh_A 279 -YNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM----PDKLVTVFDWGQMYG-V-----------ATVDG 341 (451)
T ss_dssp -TTCCEEEEECCSCCCCCTTSTTBCSCCHHHHHHHHHHHHHHC----TTSEEEEECCTTSSC-C-----------CEETT
T ss_pred -hCCCcEEEeccCCCCCCCCCCCcCCCCHHHHHHHHHHHHHhC----CCCEEEEEeccCccc-c-----------cccCh
Confidence 776643344554433321 0 1124566777776666665 567888765432100 0 00111
Q ss_pred hhhcCCCCcceEEeecCCCCC
Q 013811 265 VANNLIPGIDFATVHSYPDQW 285 (436)
Q Consensus 265 ~~~~~~~~iD~~s~H~Y~~~w 285 (436)
....+.+|| .+|.|..++
T Consensus 342 --~~~~~ylDy-~~~~yg~~~ 359 (451)
T 3poh_A 342 --VDAKEWIDI-VVANYGSAA 359 (451)
T ss_dssp --EEGGGTCCE-EECCTTSCC
T ss_pred --hhHhhhcee-eecccCccC
Confidence 123468998 568887533
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=92.17 E-value=0.13 Score=53.68 Aligned_cols=62 Identities=18% Similarity=0.325 Sum_probs=43.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+.|+.++++|+|+|=+-.+.+ .+|.. +.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 43 dl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~G-----t~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 43 DIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYG-----TMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 445677889999999999999843211 11211 111212 267889999999999999999985
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=92.01 E-value=0.27 Score=52.16 Aligned_cols=63 Identities=19% Similarity=0.266 Sum_probs=44.9
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+.|+.|+++|+++|-+-.+... +|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 57 G~~~g~~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~G-----t~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 57 GDLNGVTQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLG-----TESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCHHHHHTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccC-----CHHHHHHHHHHHHHcCCEEEEEEC
Confidence 34566778899999999999998432111 121 2222223 267789999999999999999985
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=92.01 E-value=1.4 Score=44.30 Aligned_cols=139 Identities=9% Similarity=0.032 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEccc-cCCCCCCCccCCCCCCh----hhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAF-SDGGYRPLQRSPGSYNE----QMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKK 142 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~-~d~~~~~lq~~pg~~~~----~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~ 142 (436)
-+.++-.+.+|+.|++.|=+-+- -|| +.-....-..++- -.-+.+.+++++|+++||++.+.++..++++-
T Consensus 105 fDp~~Wa~~~k~AGakyvvlTaKHHDG-F~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S~~~dW~~--- 180 (455)
T 2zxd_A 105 WDPQEWADLFKKAGAKYVIPTTKHHDG-FCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRF--- 180 (455)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEECTTC-CBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCGGG---
T ss_pred CCHHHHHHHHHHhCCCEEEEEeeccCC-ccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEEEecCCccccC---
Confidence 46778899999999998887442 122 1100000011211 02367789999999999999999873333210
Q ss_pred hhhhHHhhcCCCCCCCCCCCC----ChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHH
Q 013811 143 QYVNWARSQGQFLTSDDDFFR----NPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQA 218 (436)
Q Consensus 143 ~y~~W~~~~G~~~~~~~~f~~----~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~ 218 (436)
+ ........+.|. ++...+.+...+++|+++ |+ |.++-++..- |. ... -
T Consensus 181 --p------~~~~~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~--------Y~--pd~lWfDg~~-~~------~~~--w 233 (455)
T 2zxd_A 181 --T------TEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDL--------YL--PDVLWNDMGW-PE------KGK--E 233 (455)
T ss_dssp --C------CSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHH--------HC--CSEEEEESCC-CG------GGT--T
T ss_pred --c------ccccccccccccCCCccHHHHHHHHHHHHHHHhh--------cC--CcEEEECCCC-Cc------cch--h
Confidence 0 000000111122 577889999999999999 95 5676566321 11 110 0
Q ss_pred HHHHHHHHhhccCCCCEEE
Q 013811 219 WITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 219 w~~~~~~~Ir~~Dp~~lV~ 237 (436)
-..++.+.++++.|+.+|.
T Consensus 234 ~~~~~~~~~~~~~P~~vvn 252 (455)
T 2zxd_A 234 DLKYLFAYYYNKHPEGSVN 252 (455)
T ss_dssp HHHHHHHHHHHHCTTCCBC
T ss_pred hHHHHHHHHHHhCCCEEEE
Confidence 1356777888888976654
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=0.18 Score=52.71 Aligned_cols=62 Identities=19% Similarity=0.244 Sum_probs=43.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+.|+.++++|+|+|=+-.+.+ .+|. .+.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 38 dl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~G-----t~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 38 DMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYG-----TNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccC-----CHHHHHHHHHHHHHCCCEEEEEec
Confidence 445677889999999999999833211 1221 1122222 257789999999999999999985
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=0.15 Score=53.50 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=63.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----C--CCCCC---ccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----G--GYRPL---QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~~l---q~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~ 136 (436)
+-..+.+.|+.+|++|+|+|=+....+ . +|... .+.| .| ...+.|+.+|++|+++||+||+++.-+
T Consensus 142 ~~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~-~~--Gt~~d~~~lv~~~H~~Gi~VilD~V~N-- 216 (602)
T 2bhu_A 142 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PY--GRPEDLMALVDAAHRLGLGVFLDVVYN-- 216 (602)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECCS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCc-CC--CCHHHHHHHHHHHHHCCCEEEEEeccc--
Confidence 335567789999999999999843211 1 12111 1111 01 126788999999999999999998532
Q ss_pred CCCC----hhhhh-hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 137 SFGG----KKQYV-NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 137 ~~gg----~~~y~-~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
+.+. ...|. .|........-...-=|.+|.+++.+.+.++..++.
T Consensus 217 H~~~~~~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~ 266 (602)
T 2bhu_A 217 HFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRD 266 (602)
T ss_dssp CCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHH
Confidence 2221 11111 111100000000011256799999999999998865
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=91.70 E-value=0.28 Score=49.68 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-cc--CC---------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FS--DG---------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~--d~---------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-..+.+.|+.++++|+|+|=+.. +. .+ +|. .+.|.-| ..+.|+.+|++|+++||+||
T Consensus 41 ~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~G-----t~~df~~lv~~~H~~Gi~Vi 115 (478)
T 2guy_A 41 TWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYG-----TADDLKALSSALHERGMYLM 115 (478)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSC-----CHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCC-----CHHHHHHHHHHHHHCCCEEE
Confidence 445677889999999999999843 21 11 011 1122222 26778999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 116 lD~V 119 (478)
T 2guy_A 116 VDVV 119 (478)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=91.70 E-value=0.28 Score=49.33 Aligned_cols=64 Identities=8% Similarity=0.090 Sum_probs=40.9
Q ss_pred hHHHH-HHHHHHCCCCEEEEccccC---CC-C-CCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 69 KVSTA-FHEAASHGLTVARTWAFSD---GG-Y-RPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 69 ~~~~~-l~~l~~~G~N~vRi~~~~d---~~-~-~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+. ++.|+++|+|+|=+-...+ +. | ...++..-..++. ..+.|+.+|++|+++||+||+++.
T Consensus 15 gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 15 DVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp HHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45544 6999999999999843211 10 0 0111111112221 267889999999999999999984
|
| >3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=91.64 E-value=1.7 Score=43.45 Aligned_cols=142 Identities=15% Similarity=0.186 Sum_probs=82.4
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCCh-------hhhhhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYNE-------QMFKGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~~-------~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
.-+.++-.+.+|+.|++.+=+-. +-|| +.-....-..|+- -.-+.+..+.++|+++||++-+.+.-.|...
T Consensus 58 ~fd~~~w~~~~k~aGaky~v~t~kHHdG-f~lw~s~~t~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~~g~Y~S~~W~~~ 136 (443)
T 3gza_A 58 ELNTDQWVQAAKAAGCKFAVLTATHETG-FGLWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGIRWNSL 136 (443)
T ss_dssp TCCHHHHHHHHHTTTCSEEEEESCCSSC-CBSSCCSSCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECCSCBTT
T ss_pred hCCHHHHHHHHHHcCCCEEEEeeEeCCC-cccCCCCCCCcccccCCccCCCcCHHHHHHHHHHHcCCeEEEEECccccCc
Confidence 35677889999999999887743 2232 2111111112221 1146778999999999999999876445432
Q ss_pred CChhhhhhHHhhcCCCCCCCCCCC--CChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHH
Q 013811 139 GGKKQYVNWARSQGQFLTSDDDFF--RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTI 216 (436)
Q Consensus 139 gg~~~y~~W~~~~G~~~~~~~~f~--~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~ 216 (436)
.+...+. ......+- .++...+.+...+++|+++ |+.- .++-++-..+-... .
T Consensus 137 ~~~~~~~---------~~~~~~~~~~~~~~y~~~~~~Ql~ELlt~--------Ygpi-d~lWfDg~~~~~~~------~- 191 (443)
T 3gza_A 137 LGIHNFK---------AEGEGAFARNRQAWYKRLCEKMVTELCTR--------YGDL-YMIWFDGGADDPRA------D- 191 (443)
T ss_dssp TTEETTE---------ESCCHHHHHHHHHHHHHHHHHHHHHHHHS--------SCCC-SEEEETTCCCCTTT------T-
T ss_pred ccccccc---------cccccccCccccHHHHHHHHHHHHHHHHh--------CCCc-cEEEEeCCCCcccc------C-
Confidence 1110000 00000000 1245677888999999999 9752 35556665521110 0
Q ss_pred HHHHHHHHHHhhccCCCCEEE
Q 013811 217 QAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 217 ~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
..++.+.||++.|+.+|.
T Consensus 192 ---~~~~~~~i~~~qP~~vi~ 209 (443)
T 3gza_A 192 ---GPDVEPIVNKYQPNCLFY 209 (443)
T ss_dssp ---SCCCHHHHHHHCTTSEEE
T ss_pred ---HHHHHHHHHHHCcCEEEE
Confidence 134567899999998776
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.59 E-value=0.14 Score=53.22 Aligned_cols=62 Identities=16% Similarity=0.267 Sum_probs=43.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-----CCCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-----GGYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+.|+.++++|+|+|=+-.+.+ .+|.. +.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 29 dl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~G-----t~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 29 DLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFG-----TMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 445677789999999999999843211 11211 111112 267889999999999999999985
|
| >3cbw_A YDHT protein; structural genomics, unknown function, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: CIT; 1.27A {Bacillus subtilis} PDB: 2whk_A 2qha_A | Back alignment and structure |
|---|
Probab=91.53 E-value=7.3 Score=37.70 Aligned_cols=122 Identities=11% Similarity=0.174 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---------C---hHHHHHHHHHHHHHhhcc-CCCCE
Q 013811 169 GYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---------S---GRTIQAWITEMASYVKSI-DRNHL 235 (436)
Q Consensus 169 ~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---------~---~~~~~~w~~~~~~~Ir~~-Dp~~l 235 (436)
..|..+++.+++.+.... -.+-| | .|-+..|.+....+ . ++.+.+..+.|++++|+. .-+.+
T Consensus 146 ~~~~~~ld~iA~~l~~l~---~~gvP-V-~~Rp~HE~nG~WfwWg~~g~~~~~~~~p~~yk~lwr~v~d~~r~~~g~~Nl 220 (353)
T 3cbw_A 146 KRLNAMLSKIADGLQELE---NQGVP-V-LFRPLHEMNGEWFWWGLTSYNQKDNERISLYKQLYKKIYHYMTDTRGLDHL 220 (353)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTTCC-E-EEECSCCTTSSSSTTSCSSTTCCCHHHHHHHHHHHHHHHHHHHTTSCCCSE
T ss_pred HHHHHHHHHHHHHHHHhc---cCCCc-E-EEEeCcccCCCcccccCcCccCCCCCCHHHHHHHHHHHHHHHHhccCCCcE
Confidence 456677777766422111 12346 3 47899999864211 1 245888889999999854 33445
Q ss_pred EEe-CCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcC
Q 013811 236 LEA-GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILR 314 (436)
Q Consensus 236 V~v-G~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~ 314 (436)
+-+ ...+..+ ....++|+ .+.+|++++-.|... +. ... . +. .+.. .+
T Consensus 221 iwvwsp~~~~~----~~~~~YPG------------DdyVDivG~D~Y~~~--~~-~~~-~-------~~----~~~~-~~ 268 (353)
T 3cbw_A 221 IWVYSPDANRD----FKTDFYPG------------ASYVDIVGLDAYFQD--AY-SIN-G-------YD----QLTA-LN 268 (353)
T ss_dssp EEEECCBTTSS----CTTTTCCC------------TTSCSEEEEEEEESC--TT-CCC-C-------HH----HHHT-TS
T ss_pred EEEEeCCCCCC----CccccCCC------------CCeEEEEEEecCCCC--cc-hHH-H-------HH----HHHh-CC
Confidence 543 1111000 01123442 357999999999532 11 100 0 11 1223 79
Q ss_pred CcEEEEecCCCCC
Q 013811 315 KPILLAEFGKSRK 327 (436)
Q Consensus 315 kPv~i~EfG~~~~ 327 (436)
||+.|+|+|....
T Consensus 269 Kpial~E~G~~~~ 281 (353)
T 3cbw_A 269 KPFAFTEVGPQTA 281 (353)
T ss_dssp SCEEEEEEEESSC
T ss_pred CCEEEeccCCCCC
Confidence 9999999998765
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=91.51 E-value=6.5 Score=41.91 Aligned_cols=160 Identities=19% Similarity=0.199 Sum_probs=88.0
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC----ccCCC--CCChhhhhh-HHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL----QRSPG--SYNEQMFKG-LDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l----q~~pg--~~~~~~l~~-lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
+.+.+.+.++.++++|++.+=+ .| +|..- +..-| ..|++.|-. |..+++.++++||++.|-+.-..-..
T Consensus 344 ~e~~i~~~ad~~~~~G~~~~vi---DD-gW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~GlW~~P~~v~~ 419 (720)
T 2yfo_A 344 TGDTIVDLAKEAASLGIDMVVM---DD-GWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINE 419 (720)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE---CS-SSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CHHHHHHHHHHHHHcCCcEEEE---Cc-ccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEEEEEecccccCC
Confidence 4577889999999999986544 22 34110 11123 346656654 99999999999999988764210000
Q ss_pred CC--hhhhhhHHhhc-CCCCC-CCC---CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC
Q 013811 139 GG--KKQYVNWARSQ-GQFLT-SDD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP 211 (436)
Q Consensus 139 gg--~~~y~~W~~~~-G~~~~-~~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~ 211 (436)
.. ...++.|.... +.... ... --+++|++++++.+.+..+++. | +-.-| =|+- |+.-.....
T Consensus 420 ~S~l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~--------~-GIDy~-K~D~-n~~~~~~~~ 488 (720)
T 2yfo_A 420 DSDLYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQ--------G-KIDYV-KWDM-NRSMADVYA 488 (720)
T ss_dssp SSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT--------S-CCCEE-EECC-CSCCCSCCS
T ss_pred CCHHHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHH--------c-CCCEE-EECC-CCCccccCC
Confidence 00 11234454321 11100 001 1257899999999999999877 3 11122 2552 332211001
Q ss_pred ChH--HHHHHHHHHHHHhhccCCCCEEEeCC
Q 013811 212 SGR--TIQAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 212 ~~~--~~~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
.+. ....-+.++.+.|++..|..++....
T Consensus 489 ~~~~~~y~~~~y~l~~~l~~~~p~v~~e~C~ 519 (720)
T 2yfo_A 489 GNLSYDYVLGVYDFMERLCSRYPDLLLEGCS 519 (720)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHSTTCEEEECB
T ss_pred ccHHHHHHHHHHHHHHHHHHhCCCcEEEecc
Confidence 111 11222345677888888987776543
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=91.42 E-value=0.33 Score=51.19 Aligned_cols=156 Identities=15% Similarity=0.106 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC-------CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc-C
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD-------GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN-N 134 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d-------~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~-~ 134 (436)
..+.+.|+.++++|+|+|=+..+.+ .+|. .+.|.-| ..+.|+.++++|+++||+||+++.- +
T Consensus 113 ~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~G-----t~~d~~~Lv~~ah~~GI~VilD~V~NH 187 (628)
T 1g5a_A 113 KGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALG-----TIGDLREVIAALHEAGISAVVDFIFNH 187 (628)
T ss_dssp HHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTC-----CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCC-----CHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 4566778999999999999843211 1221 1222222 2678899999999999999999852 2
Q ss_pred CCCC--------CChhhhhhHHhhc-----------------CC----CCC---C------------CCCCCCChHHHHH
Q 013811 135 YDSF--------GGKKQYVNWARSQ-----------------GQ----FLT---S------------DDDFFRNPVVKGY 170 (436)
Q Consensus 135 w~~~--------gg~~~y~~W~~~~-----------------G~----~~~---~------------~~~f~~~~~~~~~ 170 (436)
-..- .|.+.|..|..-. +. ... . .+-=|.+|++++.
T Consensus 188 ~s~~~~wf~~~~~g~~~y~d~y~~~~~~~~P~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V~~~ 267 (628)
T 1g5a_A 188 TSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRA 267 (628)
T ss_dssp EETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSSSTTEEEBCTTSHHHHHH
T ss_pred ccccchhHHHHhcCCCccccccccCCCCCCcccccccccccCCCCCCCccccCCCCCEEeccCCCCCCccCCCCHHHHHH
Confidence 1100 1111222221000 00 000 0 0112468999999
Q ss_pred HHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEE
Q 013811 171 YKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236 (436)
Q Consensus 171 ~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV 236 (436)
+.+.++.+++. .+.|-.+-.-+. +..++.. .+.+.+....+++++.+.+++..|+.++
T Consensus 268 i~~~l~~w~~~--GvDGfRlDa~~~-----i~k~~g~-~~~~~p~~~~~~~~~r~~~~~~~p~~~~ 325 (628)
T 1g5a_A 268 MAGEMLFLANL--GVDILRMDAVAF-----IWKQMGT-SCENLPQAHALIRAFNAVMRIAAPAVFF 325 (628)
T ss_dssp HHHHHHHHHTT--TCSEEEETTGGG-----SCCCTTS-CSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHc--CCCEEEEecccc-----cccccCc-cccCcHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999999853 344422211111 1122211 1112234577888888888988887544
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=91.40 E-value=0.3 Score=49.22 Aligned_cols=79 Identities=9% Similarity=0.151 Sum_probs=48.1
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHH-HHHHHCCCCEEEEccccCC------C---CCCCccCCCCCChh--hh
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAF-HEAASHGLTVARTWAFSDG------G---YRPLQRSPGSYNEQ--MF 110 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l-~~l~~~G~N~vRi~~~~d~------~---~~~lq~~pg~~~~~--~l 110 (436)
+|+...+..++ |.. ..+.+++ +.|+++|++.|=|....+. . |...|+..-..++. -.
T Consensus 8 ~g~~~i~~~f~--W~w---------~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~ 76 (496)
T 4gqr_A 8 QGRTSIVHLFE--WRW---------VDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNE 76 (496)
T ss_dssp TTCCEEEEETT--CCH---------HHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCH
T ss_pred CCCcEEEEecC--CCH---------HHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCH
Confidence 45555666655 321 2454444 6799999999999443220 0 11223221111221 25
Q ss_pred hhHHHHHHHHHHcCCEEEEecc
Q 013811 111 KGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+.|+.+|++|+++||+||+++.
T Consensus 77 ~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 77 DEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEEc
Confidence 6789999999999999999985
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=91.35 E-value=0.31 Score=48.82 Aligned_cols=66 Identities=26% Similarity=0.380 Sum_probs=44.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEcccc---CC----CCCCCcc-CCCCC------Chh--hhhhHHHHHHHHHHcCCEEEEe
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFS---DG----GYRPLQR-SPGSY------NEQ--MFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~---d~----~~~~lq~-~pg~~------~~~--~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
-..+.+.|+.++++|+|+|=+.... .+ +|..... .+|.| ++. ..+.|+.++++|+++||+||++
T Consensus 27 ~~gi~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD 106 (435)
T 1mxg_A 27 WDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIAD 106 (435)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3567788999999999999884321 11 1211110 12222 221 3678899999999999999999
Q ss_pred cc
Q 013811 131 LA 132 (436)
Q Consensus 131 l~ 132 (436)
+.
T Consensus 107 ~V 108 (435)
T 1mxg_A 107 VV 108 (435)
T ss_dssp EC
T ss_pred EC
Confidence 85
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=91.29 E-value=0.32 Score=51.47 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=43.0
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC-------CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD-------GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d-------~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
-..+.+.|+.++++|+|+|=+-.+.+ .+|. .+.+.-| ..+.|+.++++|+++||+||+++.
T Consensus 105 l~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~G-----t~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 105 LQGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLG-----SNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp HHHHHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 35677788999999999999843211 1121 1111112 267889999999999999999985
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=91.23 E-value=0.16 Score=54.09 Aligned_cols=62 Identities=21% Similarity=0.336 Sum_probs=43.6
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC-------------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG-------------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKL 127 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~-------------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~v 127 (436)
+-..+.+.|++|+++|+++|=+-.+.+. +|. .+.+.-| ..+.|+.+|++|+++||+|
T Consensus 50 dl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~G-----t~~df~~Lv~~aH~~GikV 124 (686)
T 1qho_A 50 DLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFG-----NWTTFDTLVNDAHQNGIKV 124 (686)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEE
Confidence 4466788899999999999998432110 010 1111212 2678899999999999999
Q ss_pred EEecc
Q 013811 128 ILSLA 132 (436)
Q Consensus 128 il~l~ 132 (436)
|+++.
T Consensus 125 ilD~V 129 (686)
T 1qho_A 125 IVDFV 129 (686)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99985
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=91.11 E-value=6.5 Score=41.95 Aligned_cols=160 Identities=18% Similarity=0.230 Sum_probs=90.5
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC----ccCCC--CCChhhhh-hHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL----QRSPG--SYNEQMFK-GLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l----q~~pg--~~~~~~l~-~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
+.+.+.+.++.++++|++.+=+ .| +|..- +...| .+|++.|- .|..+++.+++.||++.|-+.-..-..
T Consensus 345 tee~il~~ad~~~~~G~e~fvi---DD-GW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~ih~~Glk~glW~~Pe~v~~ 420 (745)
T 3mi6_A 345 NEAKLMTIVNQAKRLGIEMFVL---DD-GWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKFGLWFEPEMVSV 420 (745)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE---CT-TCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CHHHHHHHHHHHHHcCCcEEEE---Cc-ccccCCCCCcccCCCceeChhhcCccHHHHHHHHHHCCCEEEEEEcccccCC
Confidence 4578899999999999985443 33 35211 11223 24455554 589999999999999988764310000
Q ss_pred CC--hhhhhhHHhhc--CCCCCCCC---CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCC--CC
Q 013811 139 GG--KKQYVNWARSQ--GQFLTSDD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRC--TS 209 (436)
Q Consensus 139 gg--~~~y~~W~~~~--G~~~~~~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~--~~ 209 (436)
.. ....+.|.... |....... --+++|++++++.+.++.++.. |. -..| =|+ +||.-. ..
T Consensus 421 dS~l~~~hPdw~l~~~~g~~~~~r~~~vLD~tnPevr~~i~~~l~~ll~~--------~G-IDy~-K~D-~nr~i~~~~~ 489 (745)
T 3mi6_A 421 DSDLYQQHPDWLIHAPKSTPTPGRHQFVLDMARPEVVDYLFKLMSQMIES--------AN-LDYI-KWD-MNRYATEMFS 489 (745)
T ss_dssp SSSHHHHCGGGBCCCTTCCCCCSSSCEEBCTTCHHHHHHHHHHHHHHHHH--------HT-CSEE-EEC-CCSCCCSCCC
T ss_pred CCHHHHhCcceEEEcCCCceeecCCeEEECCCCHHHHHHHHHHHHHHHHH--------CC-CCEE-EEC-CCCCCcccCC
Confidence 00 11234554321 11110111 1257899999999999999987 43 1222 255 555422 11
Q ss_pred C--C---ChHHHHHHHH---HHHHHhhccCCCCEEEeCC
Q 013811 210 D--P---SGRTIQAWIT---EMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 210 ~--~---~~~~~~~w~~---~~~~~Ir~~Dp~~lV~vG~ 240 (436)
. + .++.+.+.+. ++.+.||+.-|+.+|-..+
T Consensus 490 ~~~~~~~q~~~~~~y~~g~y~ll~~l~~~~P~v~ie~Cs 528 (745)
T 3mi6_A 490 SRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLFESCA 528 (745)
T ss_dssp SSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcCccccccHHHHHHHHHHHHHHHHHHhhCCCeEEEecC
Confidence 1 1 1223344433 3466778889998886443
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.00 E-value=0.33 Score=49.33 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=43.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-cc--CC---------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FS--DG---------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~--d~---------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-..+.+.|+.++++|+|+|=+.. +. .+ +|. .+.+.-| ..+.|+.+|++|+++||+||
T Consensus 41 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~G-----t~~df~~lv~~~H~~Gi~Vi 115 (484)
T 2aaa_A 41 SWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFG-----TADNLKSLSDALHARGMYLM 115 (484)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEE
Confidence 345677889999999999999843 21 11 011 1122222 25778999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 116 lD~V 119 (484)
T 2aaa_A 116 VDVV 119 (484)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=90.87 E-value=0.2 Score=52.02 Aligned_cols=63 Identities=19% Similarity=0.337 Sum_probs=43.9
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC-----CCCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD-----GGYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d-----~~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+.|+.++++|+|+|=+-.+.+ .+|.. +.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~G-----t~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFG-----TMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3456677889999999999999833211 11211 111112 267789999999999999999985
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=90.66 E-value=0.38 Score=50.42 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC-------CCCCCCcc-C------CCCCChh--hhhhHHHHHHHHHHcCCEEEEe
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD-------GGYRPLQR-S------PGSYNEQ--MFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d-------~~~~~lq~-~------pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
-..+.+.|+.++++|+|+|=+....+ .+|..... . +|..++. ..+.|+.+|++|+++||+||++
T Consensus 149 ~~gi~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD 228 (599)
T 3bc9_A 149 WNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFD 228 (599)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 35577889999999999999843211 12211100 0 1112222 3678899999999999999999
Q ss_pred cc
Q 013811 131 LA 132 (436)
Q Consensus 131 l~ 132 (436)
+.
T Consensus 229 ~V 230 (599)
T 3bc9_A 229 AV 230 (599)
T ss_dssp EC
T ss_pred EC
Confidence 85
|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
Probab=90.57 E-value=7.8 Score=41.37 Aligned_cols=162 Identities=17% Similarity=0.175 Sum_probs=89.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCC----CccCCCC--CChhhh-hhHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRP----LQRSPGS--YNEQMF-KGLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~----lq~~pg~--~~~~~l-~~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
+.+.+.+..+.++++|+..+=+ .| +|-. -..+.|. .|++.| ..|..+++.+++.||+.-|-+.-.....
T Consensus 344 ~e~~i~~~ad~aa~lG~e~fvi---DD-GWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~GmkfGLW~epe~v~~ 419 (729)
T 4fnq_A 344 NEEKLVNIAKTEAELGIELFVL---DD-GWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQFGLWVEPEMVSP 419 (729)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE---CS-CCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CHHHHHHHHHHHHhcCccEEEE---cc-eeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCEEEEEeeccccCC
Confidence 4578889999999999997665 23 2310 0111121 233222 5689999999999999988653210000
Q ss_pred CC--hhhhhhHHhhc-CC-CCCCCC---CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC
Q 013811 139 GG--KKQYVNWARSQ-GQ-FLTSDD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP 211 (436)
Q Consensus 139 gg--~~~y~~W~~~~-G~-~~~~~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~ 211 (436)
.. ....+.|.... +. ...... --+++|++++++.+.+..+++. +.= .-+=|+-...+......
T Consensus 420 ~S~l~~~hPdw~~~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~--------~Gi--dYiK~D~n~~~~~~~~~ 489 (729)
T 4fnq_A 420 NSELYRKHPDWCLHVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLAS--------API--TYVKWDMNRHMTEIGSS 489 (729)
T ss_dssp SSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT--------TTC--CEEEEECCCCCCSCCCT
T ss_pred CcHHHHhCchheeccCccCCccCCccccccCCChhHHHHHHHHHHHHHHH--------CCC--CEEEEcCCCCCCcCCCC
Confidence 00 01223443221 11 010111 1357899999988888888877 432 23447754444332211
Q ss_pred ------ChHHHH---HHHHHHHHHhhccCCCCEEEeCCC
Q 013811 212 ------SGRTIQ---AWITEMASYVKSIDRNHLLEAGLE 241 (436)
Q Consensus 212 ------~~~~~~---~w~~~~~~~Ir~~Dp~~lV~vG~~ 241 (436)
.++... .-+.++.+.|++..|+.++.....
T Consensus 490 ~~~~~~~~~~~~~~~~~~y~l~d~L~~~~P~i~ie~C~~ 528 (729)
T 4fnq_A 490 ALPPERQRETAHRYMLGLYRVMDEMTSRFPHILFESCSG 528 (729)
T ss_dssp TSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEEEBT
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHCCCcEEEcccC
Confidence 112222 223456677888899988876543
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=90.54 E-value=0.2 Score=54.77 Aligned_cols=25 Identities=4% Similarity=0.288 Sum_probs=22.0
Q ss_pred hhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 108 QMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 108 ~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+..++++|++|+++||+||+++.
T Consensus 376 ~~~~efk~LV~~aH~~GIkVIlDvV 400 (884)
T 4aio_A 376 SRIIEYRQMVQALNRIGLRVVMDVV 400 (884)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHHHHHHHHhcCCceeeeec
Confidence 3466799999999999999999985
|
| >3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A* | Back alignment and structure |
|---|
Probab=89.90 E-value=9.2 Score=39.07 Aligned_cols=147 Identities=15% Similarity=0.202 Sum_probs=87.6
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCC-------CCcc----------CCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYR-------PLQR----------SPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~-------~lq~----------~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.+.+++.++.|+..++|++-++.-.+-+|+ .|.. ..|.|.+ +.+.++++.|+++||.||.
T Consensus 198 ~~~ik~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~~~~~~~~g~YT~---~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 198 VDEVKRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQ---EQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCH---HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCccccCCCCCCCcCH---HHHHHHHHHHHHcCCEEEE
Confidence 478999999999999999998654433342 2211 1134664 4568899999999999999
Q ss_pred ecccCCCCCCChh----hhhhHHhhcCCCCC--------CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEE
Q 013811 130 SLANNYDSFGGKK----QYVNWARSQGQFLT--------SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197 (436)
Q Consensus 130 ~l~~~w~~~gg~~----~y~~W~~~~G~~~~--------~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~ 197 (436)
.+-.. |-.. .|+.... .+...+ ...-.-.+++..+..++.+++++.- |.. +
T Consensus 275 EID~P----GH~~a~l~~yp~L~~-~~~~~~~~~~~~~~~~~l~~~~~~ty~fl~~vl~Ev~~l--------Fp~-~--- 337 (525)
T 3gh5_A 275 EIDMP----GHTNAALASYGELNP-DGKRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAI--------SPS-P--- 337 (525)
T ss_dssp ECCCS----SSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHH--------CCS-S---
T ss_pred Eeccc----chHHHHHHhChhhcc-CCCCCcccccCCCCCcccCCCChhHHHHHHHHHHHHHHh--------CCC-C---
Confidence 87431 2221 2332211 111000 0011124677788778888888765 431 2
Q ss_pred EEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 198 AWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 198 ~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
.+-| +-|.... ..+.+..+++++.+.+++... .++.
T Consensus 338 ~iHiGgDE~~~~---~~~~~~~F~~~v~~~l~~~Gk-~~i~ 374 (525)
T 3gh5_A 338 YIHLGGDESNAT---SAADYDYFFGRVTAIANSYGK-KVVG 374 (525)
T ss_dssp EEECCCCCCTTS---CHHHHHHHHHHHHHHHHHTTC-EEEE
T ss_pred EEEEcCcCCCCC---CHHHHHHHHHHHHHHHHHCCC-EEEE
Confidence 1333 2233221 245678899999999998653 3443
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=89.81 E-value=0.37 Score=51.32 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=43.8
Q ss_pred hhhhHHHHHH--HHHHCCCCEEEEcc-ccC--C-------------CCC-----CCccCCCCCChhhhhhHHHHHHHHHH
Q 013811 66 QRSKVSTAFH--EAASHGLTVARTWA-FSD--G-------------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARK 122 (436)
Q Consensus 66 ~~~~~~~~l~--~l~~~G~N~vRi~~-~~d--~-------------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~ 122 (436)
+-.-+.+.|+ +|+++|+|+|=+-. +.. . +|. .+.+.-| ..+.|+.+|++|++
T Consensus 53 dl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~G-----t~~dfk~Lv~~aH~ 127 (686)
T 1d3c_A 53 DWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYG-----TIADFQNLIAAAHA 127 (686)
T ss_dssp CHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccC-----CHHHHHHHHHHHHH
Confidence 4466788899 99999999999843 210 0 110 1112222 26788999999999
Q ss_pred cCCEEEEecc
Q 013811 123 YGIKLILSLA 132 (436)
Q Consensus 123 ~Gi~vil~l~ 132 (436)
+||+||+++.
T Consensus 128 ~GI~VilD~V 137 (686)
T 1d3c_A 128 KNIKVIIDFA 137 (686)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEeC
Confidence 9999999985
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=89.52 E-value=0.35 Score=52.04 Aligned_cols=106 Identities=11% Similarity=0.218 Sum_probs=60.7
Q ss_pred HHHHHHHHHCCCCEEEEccccC------CCCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-cCCCCC
Q 013811 71 STAFHEAASHGLTVARTWAFSD------GGYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-NNYDSF 138 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d------~~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~~~ 138 (436)
++.|+.++++|+|+|=+....+ -+|.. +.+.-| ..+.|..+|++|+++||+||+++. |+-..-
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~G-----t~~df~~lv~~~H~~Gi~VilD~V~NH~~~~ 279 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSG-----TPEDLKYLVDKAHSLGLRVLMDVVHSHASNN 279 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEECCSCBCCC
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCC-----CHHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 3469999999999999843211 11211 111212 257889999999999999999985 321110
Q ss_pred --CChhh-------hhhHHhh--cCCCC--CCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 139 --GGKKQ-------YVNWARS--QGQFL--TSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 139 --gg~~~-------y~~W~~~--~G~~~--~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
-|... +..|... .|... ...+--|.+|++++.+.+.++..+++
T Consensus 280 ~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e 335 (755)
T 3aml_A 280 VTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDE 335 (755)
T ss_dssp TTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred cccchhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHH
Confidence 01100 1111100 00000 00011256799999999999999985
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=89.24 E-value=0.37 Score=50.80 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHH-CCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcC--C--EEEEec
Q 013811 66 QRSKVSTAFHEAAS-HGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYG--I--KLILSL 131 (436)
Q Consensus 66 ~~~~~~~~l~~l~~-~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~G--i--~vil~l 131 (436)
+-.-+.+.|+.+|+ +|+|+|=+....+. +|. .+.+.-| ..+.|+.+|++|+++| | +||+++
T Consensus 189 ~~~gi~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~G-----t~~dfk~LV~~~H~~G~~I~~~VIlD~ 263 (637)
T 1ji1_A 189 DLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFG-----DNSTLQTLINDIHSTANGPKGYLILDG 263 (637)
T ss_dssp CHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred CHHHHHHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccC-----CHHHHHHHHHHHHhCCCCccceEEEEE
Confidence 44556778999999 99999999432111 121 1122222 2578899999999999 9 999998
Q ss_pred c
Q 013811 132 A 132 (436)
Q Consensus 132 ~ 132 (436)
.
T Consensus 264 V 264 (637)
T 1ji1_A 264 V 264 (637)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=89.13 E-value=0.55 Score=50.31 Aligned_cols=114 Identities=12% Similarity=0.207 Sum_probs=63.4
Q ss_pred hhHHHH--HHHHHHCCCCEEEEccccC---C------------CCCC-----CccCCCC--CChhhhhhHHHHHHHHHHc
Q 013811 68 SKVSTA--FHEAASHGLTVARTWAFSD---G------------GYRP-----LQRSPGS--YNEQMFKGLDFVIAEARKY 123 (436)
Q Consensus 68 ~~~~~~--l~~l~~~G~N~vRi~~~~d---~------------~~~~-----lq~~pg~--~~~~~l~~lD~~i~~a~~~ 123 (436)
..+.+. |+.+|++|+|+|=+....+ . +|.. +.+.-|. .....++.|+.+|++|+++
T Consensus 200 ~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~ 279 (718)
T 2vr5_A 200 EGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNA 279 (718)
T ss_dssp HHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTT
T ss_pred HHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHC
Confidence 445555 9999999999999843211 0 1211 1111121 1113368899999999999
Q ss_pred CCEEEEecc-cCCCC--CCCh-hhh-----hhHHhh--cCC-CCCC----CCCC-CCChHHHHHHHHHHHHHHhc
Q 013811 124 GIKLILSLA-NNYDS--FGGK-KQY-----VNWARS--QGQ-FLTS----DDDF-FRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 124 Gi~vil~l~-~~w~~--~gg~-~~y-----~~W~~~--~G~-~~~~----~~~f-~~~~~~~~~~~~~v~~iv~r 181 (436)
||+||+++. |+-.. ..|. ..+ ..|... .+. .... ..++ +.+|.+++.+.+.++..+++
T Consensus 280 Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e 354 (718)
T 2vr5_A 280 GIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTE 354 (718)
T ss_dssp TCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHH
Confidence 999999985 32111 0000 000 011100 010 0000 0112 56789999999999999985
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.07 E-value=0.25 Score=52.59 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=43.7
Q ss_pred hhhhHHHHHH--HHHHCCCCEEEEccccC---C------------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHc
Q 013811 66 QRSKVSTAFH--EAASHGLTVARTWAFSD---G------------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKY 123 (436)
Q Consensus 66 ~~~~~~~~l~--~l~~~G~N~vRi~~~~d---~------------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~ 123 (436)
+-.-+.+.|+ +|+++|+|+|=+-...+ + +|. .+.+.-| .++.|+.+|++|+++
T Consensus 50 dl~gi~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~G-----t~~df~~Lv~~aH~~ 124 (680)
T 1cyg_A 50 DWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFG-----TLSDFQRLVDAAHAK 124 (680)
T ss_dssp CHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHHT
T ss_pred CHHHHHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccC-----CHHHHHHHHHHHHHC
Confidence 4466788899 99999999999843211 0 010 1111112 267889999999999
Q ss_pred CCEEEEecc
Q 013811 124 GIKLILSLA 132 (436)
Q Consensus 124 Gi~vil~l~ 132 (436)
||+||+++.
T Consensus 125 GIkVilD~V 133 (680)
T 1cyg_A 125 GIKVIIDFA 133 (680)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEeC
Confidence 999999985
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=88.69 E-value=0.32 Score=50.46 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=63.1
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----C--CCCCCccCCCCCCh--hhhhhHHHHHHHHHHcCCEEEEecc-cCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----G--GYRPLQRSPGSYNE--QMFKGLDFVIAEARKYGIKLILSLA-NNYD 136 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~--~~~~lq~~pg~~~~--~~l~~lD~~i~~a~~~Gi~vil~l~-~~w~ 136 (436)
+-..+.+.|+.++++|+|+|=+....+ . +|.... .-..++ ...+.|..+|++|+++||+||+++. |+..
T Consensus 117 ~~~~~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~--~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 194 (558)
T 3vgf_A 117 TFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVY--LYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVG 194 (558)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCE--EEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCcccCCCCCCcCccccc--ccccccccCCHHHHHHHHHHHHHcCCEEEEEEeecccc
Confidence 445677889999999999999844321 0 111100 000011 1257889999999999999999985 3221
Q ss_pred CCC-ChhhhhhHHhhc-CCCCCCCCCC--CCChHHHHHHHHHHHHHHhc
Q 013811 137 SFG-GKKQYVNWARSQ-GQFLTSDDDF--FRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 137 ~~g-g~~~y~~W~~~~-G~~~~~~~~f--~~~~~~~~~~~~~v~~iv~r 181 (436)
.-+ ....+..|.... ........+| +.+|.+++...+.++.+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~ 243 (558)
T 3vgf_A 195 PEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKE 243 (558)
T ss_dssp SSSCCGGGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 100 011111111000 0000000111 24678899999999999964
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=88.46 E-value=0.53 Score=50.09 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=43.8
Q ss_pred hhhhHHHHHH--HHHHCCCCEEEEccccC---C--------------CCC-----CCccCCCCCChhhhhhHHHHHHHHH
Q 013811 66 QRSKVSTAFH--EAASHGLTVARTWAFSD---G--------------GYR-----PLQRSPGSYNEQMFKGLDFVIAEAR 121 (436)
Q Consensus 66 ~~~~~~~~l~--~l~~~G~N~vRi~~~~d---~--------------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~ 121 (436)
+-.-+.+.|+ +|+++|+++|=+-...+ . +|. .+.+.-| ..+.|+.||++|+
T Consensus 53 dl~gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~G-----t~~dfk~Lv~~aH 127 (683)
T 3bmv_A 53 DWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFG-----SFTDFQNLINTAH 127 (683)
T ss_dssp CHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHH
T ss_pred CHHHHHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccC-----CHHHHHHHHHHHH
Confidence 4466788899 99999999999843211 0 111 1122222 2678899999999
Q ss_pred HcCCEEEEecc
Q 013811 122 KYGIKLILSLA 132 (436)
Q Consensus 122 ~~Gi~vil~l~ 132 (436)
++||+||+++.
T Consensus 128 ~~GikVilD~V 138 (683)
T 3bmv_A 128 AHNIKVIIDFA 138 (683)
T ss_dssp HTTCEEEEEEC
T ss_pred HCCCEEEEEEc
Confidence 99999999985
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=88.42 E-value=0.54 Score=46.79 Aligned_cols=63 Identities=25% Similarity=0.391 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHCCCCEEEEccc---cCCC---------CCCCccCCCCC---Ch--hhhhhHHHHHHHHHHcCCEEEEe
Q 013811 68 SKVSTAFHEAASHGLTVARTWAF---SDGG---------YRPLQRSPGSY---NE--QMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~---~d~~---------~~~lq~~pg~~---~~--~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
..+.+.|+.++++|+|+|=+... ..+. +...++ ..| ++ ...+.|..+|++|+++||+||++
T Consensus 17 ~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~--~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD 94 (422)
T 1ua7_A 17 NTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQP--TSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVD 94 (422)
T ss_dssp HHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCE--EEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccc--eeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45677899999999999988431 1110 000110 001 11 23677899999999999999999
Q ss_pred cc
Q 013811 131 LA 132 (436)
Q Consensus 131 l~ 132 (436)
+.
T Consensus 95 ~V 96 (422)
T 1ua7_A 95 AV 96 (422)
T ss_dssp EC
T ss_pred ec
Confidence 85
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=87.90 E-value=0.4 Score=48.54 Aligned_cols=64 Identities=6% Similarity=0.049 Sum_probs=41.0
Q ss_pred hHHHH-HHHHHHCCCCEEEEccccC---C---CC-CCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 69 KVSTA-FHEAASHGLTVARTWAFSD---G---GY-RPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 69 ~~~~~-l~~l~~~G~N~vRi~~~~d---~---~~-~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+. |+.|+++|+|+|=+....+ . .| ...++..-..++. ..+.|+.+|++|+++||+||+++.
T Consensus 23 gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 23 DIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp HHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45555 6999999999999843211 0 00 0111111112221 367889999999999999999985
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=87.73 E-value=0.53 Score=49.63 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHCCCCEEEEcccc---C----C----CCCC-----CccCCCCC--C-hhhhhhHHHHHHHHHHcCCEEE
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFS---D----G----GYRP-----LQRSPGSY--N-EQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~---d----~----~~~~-----lq~~pg~~--~-~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
..+.+.|+.+|++|+|+|-+.... . + +|.. +.+.-|.- + ....+.|..+|++|+++||+||
T Consensus 120 ~g~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~Vi 199 (637)
T 1gjw_A 120 FKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVI 199 (637)
T ss_dssp HHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEE
Confidence 456788999999999999994321 1 1 1211 11111110 0 0126889999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 200 lD~V 203 (637)
T 1gjw_A 200 LDFI 203 (637)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=87.67 E-value=0.98 Score=48.59 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCC------------------CCCC-----CccCCCC--CChhhhhhHHHHHHHHH
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDG------------------GYRP-----LQRSPGS--YNEQMFKGLDFVIAEAR 121 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~------------------~~~~-----lq~~pg~--~~~~~l~~lD~~i~~a~ 121 (436)
-..+.+.|+.||++|+|+|=+....+. +|.. +.+.-|. -.....+.|..+|++|+
T Consensus 204 ~~gl~~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H 283 (750)
T 1bf2_A 204 YYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFH 283 (750)
T ss_dssp HHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHH
Confidence 345666799999999999999432111 1110 1111110 00122788999999999
Q ss_pred HcCCEEEEecc
Q 013811 122 KYGIKLILSLA 132 (436)
Q Consensus 122 ~~Gi~vil~l~ 132 (436)
++||+||+++.
T Consensus 284 ~~Gi~VilDvV 294 (750)
T 1bf2_A 284 NAGIKVYMDVV 294 (750)
T ss_dssp HTTCEEEEEEC
T ss_pred HCCCEEEEEEe
Confidence 99999999985
|
| >1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A* | Back alignment and structure |
|---|
Probab=87.13 E-value=1.1 Score=46.77 Aligned_cols=99 Identities=20% Similarity=0.321 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-CCCCCChhhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-YDSFGGKKQYVN 146 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w~~~gg~~~y~~ 146 (436)
.++++..+.+++.|+|.+=+ ++. ..++-...+..++.+-.+-+..+.+||+|.|++.-. ....||.+
T Consensus 184 ~R~~dYAR~lASiGINgvvl---NNV-----Na~~~~lt~~~l~~v~~lAd~fRpYGIkv~LSvnFasP~~lGgL~---- 251 (708)
T 1gqi_A 184 PRYTDYARINASLGINGTVI---NNV-----NADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVD---- 251 (708)
T ss_dssp HHHHHHHHHHHTTTCCEEEC---SCS-----SCCGGGGSHHHHHHHHHHHHHHGGGTCEEEEEECTTHHHHTTSCS----
T ss_pred HHHHHHHHHHhhcCcceEEe---cCC-----CCCcccCCcHHHHHHHHHHHHHHhhcCeEEEEecccCccccCCCC----
Confidence 56889999999999998876 332 234555678889999999999999999999997311 01112221
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
+.+ --||++++.+++-+++|-++ -|.+-++-+
T Consensus 252 ----------TaD--Pld~~V~~WW~~k~~eIY~~-----------IPDfgGflV 283 (708)
T 1gqi_A 252 ----------TAD--PLDPRVQQWWKTRAQKIYSY-----------IPDFGGFLV 283 (708)
T ss_dssp ----------CCC--TTSHHHHHHHHHHHHHHHHH-----------CTTCCEEEE
T ss_pred ----------CCC--CCCHHHHHHHHHHHHHHHHh-----------CCCcceEEe
Confidence 111 24788888888888777554 466666666
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=86.62 E-value=1.3 Score=48.89 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=43.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC-------------CCCCCcc-CCC-CCCh--hhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG-------------GYRPLQR-SPG-SYNE--QMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~-------------~~~~lq~-~pg-~~~~--~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-..+.+.|+.|+++|+++|=+....+. +|..... .+| ..++ ...+.|+.+|++|+++||+||
T Consensus 684 t~~gi~~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VI 763 (1039)
T 3klk_A 684 TNVRIAQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAI 763 (1039)
T ss_dssp HHHHHHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 3456778899999999999988332111 0100000 000 0111 135788999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 764 lDvV 767 (1039)
T 3klk_A 764 ADWV 767 (1039)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9986
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=86.58 E-value=0.61 Score=49.36 Aligned_cols=113 Identities=16% Similarity=0.301 Sum_probs=63.3
Q ss_pred hhHHHH--HHHHHHCCCCEEEEccc---cCC------------CCCCC---ccCCCCCC--h-hhhhhHHHHHHHHHHcC
Q 013811 68 SKVSTA--FHEAASHGLTVARTWAF---SDG------------GYRPL---QRSPGSYN--E-QMFKGLDFVIAEARKYG 124 (436)
Q Consensus 68 ~~~~~~--l~~l~~~G~N~vRi~~~---~d~------------~~~~l---q~~pg~~~--~-~~l~~lD~~i~~a~~~G 124 (436)
..+.+. |+.||++|+|+|=+... ... +|... .+.| .|. + ...+.|+.+|++|+++|
T Consensus 177 ~gi~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~-~~G~~p~~~~~d~~~lv~~~H~~G 255 (657)
T 2wsk_A 177 KALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHP-AYACSPETALDEFRDAIKALHKAG 255 (657)
T ss_dssp HHHTSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECG-GGCSSGGGHHHHHHHHHHHHHHTT
T ss_pred HHHhcccchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCH-HHcCCCCcCHHHHHHHHHHHHHCC
Confidence 345555 99999999999998432 111 12110 1111 121 1 14688999999999999
Q ss_pred CEEEEecc-cCCCC--CCC----hh--hhhhHHhhcC-CCCC----CCCCC-CCChHHHHHHHHHHHHHHhc
Q 013811 125 IKLILSLA-NNYDS--FGG----KK--QYVNWARSQG-QFLT----SDDDF-FRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 125 i~vil~l~-~~w~~--~gg----~~--~y~~W~~~~G-~~~~----~~~~f-~~~~~~~~~~~~~v~~iv~r 181 (436)
|+||+++. |+-.. ..+ .. ....|..... .+.. ...++ +.+|.+++.+.+.++..++.
T Consensus 256 i~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e 327 (657)
T 2wsk_A 256 IEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVET 327 (657)
T ss_dssp CEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEeecccccccccCccccccCCCCccceEECCCCCeeCCCCcCCcccCCCHHHHHHHHHHHHHHHHH
Confidence 99999985 32111 000 00 0011221100 0010 01122 56899999999999999985
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=86.45 E-value=0.51 Score=50.23 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=43.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-c--cCC---CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-F--SDG---GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~--~d~---~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
+-..+.+.+++++++|+++|=+.. + ..+ +|. .+.|.-| ..+.++.++++|+++||+||+++.-
T Consensus 15 tf~gi~~~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv~Dy~~Idp~lG-----t~edfk~LV~aaH~~GIkVIlDvV~ 88 (720)
T 1iv8_A 15 NFGDVIDNLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELG-----GEKEYRRLIETAHTIGLGIIQDIVP 88 (720)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTT-----HHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHhCCCCEEEECCcccCCCCCCCCCCCccCCCcCccCC-----CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345677889999999999998833 2 111 121 1111112 3678899999999999999999863
|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
Probab=86.32 E-value=12 Score=35.87 Aligned_cols=133 Identities=17% Similarity=0.262 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
..+-..+..|++.|++|++.+-. |. + .....+++.++.|.+-+..++++ |
T Consensus 59 ~~~~~~i~~~k~~g~kvllsiGG-~~---------------~------s~~~~~~~~r~~fi~si~~~~~~--------~ 108 (333)
T 3n12_A 59 ADFKSDISYLKSKGKKVVLSIGG-QN---------------G------VVLLPDNAAKDRFINSIQSLIDK--------Y 108 (333)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEES-TT---------------C------CCCCCSHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHhCCCeEEEEecC-CC---------------C------ccccCCHHHHHHHHHHHHHHHHH--------c
Confidence 34556778899999999998832 21 1 12356788899999888888887 5
Q ss_pred CCCCcEEEEEeecCCCC--------CCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCc-cc
Q 013811 191 KDDPTIMAWELMNEPRC--------TSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD-IG 261 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~--------~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~-~g 261 (436)
.=+ +.+|-=|-.. ....+.+.+..+++++.+.+++..+.-+|++.....+..... . .|. ..
T Consensus 109 gfD----GiDiDwE~p~~~~~~d~~~~~~d~~~~~~ll~eLr~~l~~~g~~~~lT~Ap~~~~~~~~~-----~-~y~~~~ 178 (333)
T 3n12_A 109 GFD----GIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMAPETAYVQGGY-----S-AYGSIW 178 (333)
T ss_dssp CCS----EEEEECCTTCCBCTTCCCTTSCCCHHHHHHHHHHHHHHHHHCTTCEEEECCBGGGTGGGG-----T-CCBBTB
T ss_pred CCC----eEEEeccCCCCCCCCCcCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEccCcccccccc-----c-cccccc
Confidence 543 3333323211 111235688999999999998888888888764322111000 0 000 00
Q ss_pred chh--hhhcCCCCcceEEeecCCC
Q 013811 262 TDF--VANNLIPGIDFATVHSYPD 283 (436)
Q Consensus 262 ~df--~~~~~~~~iD~~s~H~Y~~ 283 (436)
..+ ......+.+||+.+-.|-.
T Consensus 179 ~~y~~d~~~i~~~lD~invMtYD~ 202 (333)
T 3n12_A 179 GAYLPIIYGVKDKLTYIHVQHYNA 202 (333)
T ss_dssp TTTHHHHHHTTTTCCEEEEECSSC
T ss_pred chhHHHHHHHhcccCEEEeeeecC
Confidence 012 1123457899999888864
|
| >1l8n_A Alpha-D-glucuronidase; hydrolase; HET: GCW XYP; 1.50A {Geobacillus stearothermophilus} SCOP: c.1.8.10 d.92.2.2 PDB: 1k9d_A* 1mqq_A* 1mqp_A 1mqr_A* 1k9f_A* 1k9e_A* | Back alignment and structure |
|---|
Probab=86.23 E-value=1.2 Score=46.40 Aligned_cols=102 Identities=19% Similarity=0.254 Sum_probs=68.1
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-CCCCCChhhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-YDSFGGKKQYVN 146 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w~~~gg~~~y~~ 146 (436)
.++.+.-+.+++.|+|.+=+ ++..-. ..++-...+..++.+..+-+..+.+||+|.|++.-. ....||.+
T Consensus 178 ~R~~dYAR~lASiGINgvvl---NNVNv~--~a~~~~Lt~~~l~~v~~lAd~fRpYGIkv~LSvnFasP~~lGgL~---- 248 (679)
T 1l8n_A 178 QRIKDYARLLASVGINAISI---NNVNVH--KTETKLITDHFLPDVAEVADIFRTYGIKTFLSINYASPIEIGGLP---- 248 (679)
T ss_dssp HHHHHHHHHHHHTTCCEEEC---SCSSCC--TTGGGGGSTTTHHHHHHHHHHHHHTTCEEEEEECTTHHHHTTCCS----
T ss_pred hhHHHHHHHHhhcCcceEEe---cccccc--cccccccCHHHHHHHHHHHHHHhhccceEEEEEeccCccccCCCC----
Confidence 56888889999999998876 222100 023334667789999999999999999999997311 01113321
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
+.+ --||++++.+++-+++|-++ -|..-++-+
T Consensus 249 ----------TaD--PLd~~V~~WW~~k~~eiY~~-----------IPDfgGflV 280 (679)
T 1l8n_A 249 ----------TAD--PLDPEVRWWWKETAKRIYQY-----------IPDFGGFVV 280 (679)
T ss_dssp ----------CCC--TTSHHHHHHHHHHHHHHHHH-----------CTTCCEEEE
T ss_pred ----------CCC--CCCHHHHHHHHHHHHHHHHh-----------CCCcccEEE
Confidence 111 24788988888877777554 566666665
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=86.10 E-value=26 Score=37.33 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC----ccCCC--CCChhhhh-hHHHHHHHHHHcCCEEEEecccCCCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL----QRSPG--SYNEQMFK-GLDFVIAEARKYGIKLILSLANNYDSF 138 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l----q~~pg--~~~~~~l~-~lD~~i~~a~~~Gi~vil~l~~~w~~~ 138 (436)
+.+.+.+.++.++++|++.|=+ |.+|..- ...-| .+|++.|- .|..+++.++++||++.|-+.-..-..
T Consensus 348 ~ee~v~~~ad~~~~~G~~~~vi----DDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~GlW~~P~~v~~ 423 (732)
T 2xn2_A 348 NEDKLKTIVDKAKKLGLEMFVL----DDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMISY 423 (732)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE----CSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEEEEECTTEECS
T ss_pred CHHHHHHHHHHHHHcCCcEEEE----cCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEEEEeCccccCC
Confidence 4578899999999999987655 2224210 00112 23444454 499999999999999988763210000
Q ss_pred CC--hhhhhhHHhhc-CCCCC-CCC---CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCC-CCCC
Q 013811 139 GG--KKQYVNWARSQ-GQFLT-SDD---DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPR-CTSD 210 (436)
Q Consensus 139 gg--~~~y~~W~~~~-G~~~~-~~~---~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~-~~~~ 210 (436)
.. ....+.|.... |.+.. ... --+++|++++++.+.+..+++. +. -..| =|+....+. +...
T Consensus 424 ~S~l~~~hpdw~~~~~g~~~~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~--------~G-VD~~-K~D~~~~~~~~~~~ 493 (732)
T 2xn2_A 424 ESNLYKEHPDYLXHVPGRKPCPSRNQYVLELGRKEVRDNIFEQMVKILDS--------KK-IDYI-KWDMNRSLSDIYES 493 (732)
T ss_dssp SSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT--------SC-CCEE-EECCCCCCCSCCCT
T ss_pred CCHHHHhCchheecCCCCCCccCCceEEEcCCCHHHHHHHHHHHHHHHHH--------cC-CCEE-EECCCccccccCCC
Confidence 00 01123443221 11100 001 1256899999999888888876 21 1112 244332211 1111
Q ss_pred C-C----hHHHHHHHH---HHHHHhhccCCCCEEEeCC
Q 013811 211 P-S----GRTIQAWIT---EMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 211 ~-~----~~~~~~w~~---~~~~~Ir~~Dp~~lV~vG~ 240 (436)
. . .+.+.++.+ ++.+.|++..|..++....
T Consensus 494 ~~~~~~~~~~~~~y~~~~y~~~~~l~~~~p~i~~~~C~ 531 (732)
T 2xn2_A 494 DLPADQQGEAYHRYVLGYYDLLNKLVTRYPDILFEGCS 531 (732)
T ss_dssp TSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTSEEEECB
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 0 1 123444433 3456788888888776543
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=85.94 E-value=1.3 Score=48.85 Aligned_cols=64 Identities=13% Similarity=0.146 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHCCCCEEEEccccC---C----------CCCCCcc-CCCCC--Ch--hhhhhHHHHHHHHHHcCCEEEEe
Q 013811 69 KVSTAFHEAASHGLTVARTWAFSD---G----------GYRPLQR-SPGSY--NE--QMFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~~d---~----------~~~~lq~-~pg~~--~~--~~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
.+.+.|+.|+++|+++|=+....+ . +|..... ..| | ++ ...+.|+.+|++|+++||+||++
T Consensus 854 ~I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lG-f~i~~~yGt~edfk~LV~alH~~GI~VIlD 932 (1108)
T 3ttq_A 854 VIAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLG-FNTPTKYGTDGDLRATIQALHHANMQVMAD 932 (1108)
T ss_dssp HHHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSS-SSSCCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccC-cCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 588889999999999998843211 1 1110000 000 1 11 13578899999999999999999
Q ss_pred ccc
Q 013811 131 LAN 133 (436)
Q Consensus 131 l~~ 133 (436)
+.-
T Consensus 933 vV~ 935 (1108)
T 3ttq_A 933 VVD 935 (1108)
T ss_dssp ECC
T ss_pred ecc
Confidence 863
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=85.67 E-value=1.4 Score=47.76 Aligned_cols=63 Identities=21% Similarity=0.217 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHCCCCEEEEccc---cCC----------CCCCC---ccC---CCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 69 KVSTAFHEAASHGLTVARTWAF---SDG----------GYRPL---QRS---PGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~---~d~----------~~~~l---q~~---pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.+.+.|+.++++|+++|=+... ..+ +|... ... +-.| ...+.|+.+|++|+++||+||+
T Consensus 634 gi~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~--Gt~~df~~lv~~~H~~GI~Vil 711 (844)
T 3aie_A 634 VIAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKY--GTADDLVKAIKALHSKGIKVMA 711 (844)
T ss_dssp HHHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTT--BCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCC--CCHHHHHHHHHHHHHCCCEEEE
Confidence 4667799999999999998432 111 11110 000 0011 1267889999999999999999
Q ss_pred eccc
Q 013811 130 SLAN 133 (436)
Q Consensus 130 ~l~~ 133 (436)
++.-
T Consensus 712 D~V~ 715 (844)
T 3aie_A 712 DWVP 715 (844)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9863
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=85.60 E-value=0.68 Score=48.80 Aligned_cols=65 Identities=15% Similarity=0.131 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC---CCCCCCccCC-CCCCh--hhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD---GGYRPLQRSP-GSYNE--QMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d---~~~~~lq~~p-g~~~~--~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.+.++.++++|++.|=+..+.+ +....+++.. ...++ ...+.++.++++|+++||+||+++.
T Consensus 15 ~~i~~~LdyL~~LGvt~V~LsPi~e~~~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 15 SEIRNRLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp HHHHTTHHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCccCCCCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 5677789999999999999843211 1100011000 00111 1257889999999999999999985
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=85.29 E-value=0.6 Score=49.40 Aligned_cols=158 Identities=15% Similarity=0.184 Sum_probs=88.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccC-------CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc-c
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSD-------GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA-N 133 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d-------~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~-~ 133 (436)
-..+.+.|+.++++|+|+|=+..+.+ .+|. .+.+.-| ..+.++.++++|+++||+||+++. |
T Consensus 110 ~~gl~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~G-----t~~d~~~lv~~~h~~Gi~Vi~D~V~N 184 (655)
T 3ucq_A 110 LKGVEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLG-----TMDDLSALARALRGRGISLVLDLVLN 184 (655)
T ss_dssp HHHHHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCC-----CHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 35677889999999999999844321 1111 1112222 256789999999999999999985 3
Q ss_pred CCCCC--------CChhhhhhHH-------------hhc--------CCCC---CC----C-------------CCCCCC
Q 013811 134 NYDSF--------GGKKQYVNWA-------------RSQ--------GQFL---TS----D-------------DDFFRN 164 (436)
Q Consensus 134 ~w~~~--------gg~~~y~~W~-------------~~~--------G~~~---~~----~-------------~~f~~~ 164 (436)
+-..- .|...|..|. ... +... .. . +-=|.+
T Consensus 185 H~s~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~qpDLn~~n 264 (655)
T 3ucq_A 185 HVAREHAWAQKARAGDPKYRAYFHLFPDRRGPDAFEATLPEIFPDFAPGNFSWDEEIGEGEGGWVWTTFNSYQWDLNWAN 264 (655)
T ss_dssp EEETTSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHTTCCCSCTTTSCSSEEEETTSSSSSCEEEECSSSTTEEEBCTTS
T ss_pred ccccchHHHHHhhcCCCCCcccEEEcCCCCCCccccccCccccccCCCCcccccccccccCCceEeccccCCCCccCCCC
Confidence 21100 0011122221 000 0000 00 0 112467
Q ss_pred hHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 165 PVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 165 ~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|.+++.+.+.++.+++. .+.|-.+-.-+. +.-++.. .+.+.+....+++++.+.+++..|+.++.
T Consensus 265 p~V~~~i~~~l~~w~~~--GvDGfRlDa~~~-----l~k~~g~-~~~~~~~~~~~l~~~r~~~~~~~p~~~~v 329 (655)
T 3ucq_A 265 PDVFLEFVDIILYLANR--GVEVFRLDAIAF-----IWKRLGT-DCQNQPEVHHLTRALRAAARIVAPAVAFK 329 (655)
T ss_dssp HHHHHHHHHHHHHHHTT--TCCEEEETTGGG-----SCCCTTS-CSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHC--CCCEEEEechhh-----ccccCCC-ccCCcHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 99999999999998853 444422211111 1222211 11233456788888888899888875443
|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=85.19 E-value=2 Score=41.95 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=46.3
Q ss_pred EEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 49 ANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 49 ~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+.|+..| +... ..+...+.|+.|++.|++ |+|.. ++ .|..-.++..+.+..+++.|+++||.|+
T Consensus 4 mlGiSvY-~~~~-----~~~~~~~yi~~a~~~Gf~--~IFTS-------L~-~~e~~~~~~~~~~~~l~~~a~~~g~~vi 67 (372)
T 2p0o_A 4 MYGISVF-LGEE-----ITNDTIIYIKKMKALGFD--GIFTS-------LH-IPEDDTSLYRQRLTDLGAIAKAEKMKIM 67 (372)
T ss_dssp EEEEECC-TTSC-----CCHHHHHHHHHHHHTTCC--EEEEE-------EC-CC-----CHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEEEc-CCCC-----CHHHHHHHHHHHHHCCCC--EEEcc-------CC-ccCCChHHHHHHHHHHHHHHHHCCCEEE
Confidence 5688875 2211 125666999999999999 65432 11 1111235678999999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 68 ~DIs 71 (372)
T 2p0o_A 68 VDIS 71 (372)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9975
|
| >2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=84.43 E-value=4.5 Score=43.27 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
+.+.+.+.|+.|+.+++|++-++...|..++. ..++.|..+..+.+..+++.|+++||.||..|+-
T Consensus 164 ~~~~~~~~id~ma~~K~N~~h~hl~Dd~~~~~--~wr~~y~~~~~~~~~elv~ya~~rgI~vv~~i~P 229 (737)
T 2v5d_A 164 THQDRLDQIKFYGENKLNTYIYAPKDDPYHRE--KWREPYPESEMQRMQELINASAENKVDFVFGISP 229 (737)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCSCCSTTTT--TC-----CTTHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCeEEEEecccccchhh--ccCcCCCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 45789999999999999998875443322211 1123465555668899999999999999977753
|
| >2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* | Back alignment and structure |
|---|
Probab=83.53 E-value=2.6 Score=43.83 Aligned_cols=66 Identities=9% Similarity=0.083 Sum_probs=48.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
+.+.+.+.|+.|+.+++|++-++...|-.++ +..++.|..+..+.+..+++.|+++||.||..++-
T Consensus 164 ~~~~ik~~id~ma~~KlN~~h~Hl~DDq~~~--~~wr~~Yp~~~~~~i~elv~yA~~rgI~vv~~i~P 229 (594)
T 2v5c_A 164 THQDRLDQIKFYGENKLNTYIYAPKDDPYHR--EKWREPYPESEMQRMQELINASAENKVDFVFGISP 229 (594)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCTTCGGGT--TTTTSCCCGGGHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CHHHHHHHHHHHHHhCCcEEEEecccCcccc--cccCCCCCHHHHHHHHHHHHHHHHCCcEEEEecCC
Confidence 4578999999999999999887553331111 11234576665678999999999999999988753
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=83.35 E-value=11 Score=40.99 Aligned_cols=157 Identities=10% Similarity=0.029 Sum_probs=94.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC---------CC-----------CCCC---------ccCCCCCC----hhhhhh
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD---------GG-----------YRPL---------QRSPGSYN----EQMFKG 112 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d---------~~-----------~~~l---------q~~pg~~~----~~~l~~ 112 (436)
+-+++++.|+.|+=+|+|..=.+...+ -+ .|++ +.--|... +..+..
T Consensus 309 dW~rWEreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~L 388 (914)
T 4a4a_A 309 DWDQYEEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAEL 388 (914)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHHH
Confidence 347899999999999999887543111 00 1221 21122222 223333
Q ss_pred HHHHHHHHHHcCCEEEEecccCCCCCCCh-hhhh--------hHHhhcCCCCCC-CCCCC---CChHHHHHHHHHHHHHH
Q 013811 113 LDFVIAEARKYGIKLILSLANNYDSFGGK-KQYV--------NWARSQGQFLTS-DDDFF---RNPVVKGYYKNLIKTVL 179 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~w~~~gg~-~~y~--------~W~~~~G~~~~~-~~~f~---~~~~~~~~~~~~v~~iv 179 (436)
=.++++.+++.||..||.=+..--. .+. ..|| .|. |.+-+. -+.|+ +||-..+.-+.|+++..
T Consensus 389 q~kIl~RmrelGM~PVLPaF~G~VP-~~~~~~~P~a~i~~~~~W~---gf~~~~~~~~~~l~p~dplF~~i~~~F~~~q~ 464 (914)
T 4a4a_A 389 GRKMHDRMQSFGINPVLQGYSGMVP-RDFKEKNQEAQTISQGGWC---GFDRPDMLKTYVNEGEADYFQKVADVFYEKQK 464 (914)
T ss_dssp HHHHHHHHHHHTCEEEEECCSCEEC-TTHHHHSTTCCEECCCEET---TEECCEEECSSCCTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeecCCCcCCCCC-hHHHhhCCCCeeecCCCCC---CCCCchhcccccCCCCChHHHHHHHHHHHHHH
Confidence 3589999999999999975422100 000 0111 121 000000 01222 46777777788889988
Q ss_pred hccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 180 NRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 180 ~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
+. |++...|..-+..||-....+ ..+....+.+.+.+++.||+..-.
T Consensus 465 ~~--------yG~~~h~Y~~D~FnE~~~~~~---~~l~~~~~~v~~am~~~dp~AvWv 511 (914)
T 4a4a_A 465 EV--------FGDVTNFYGVDPFHQGGNTGD---LDNGKIYEIIQNKMIEHDNDAVWV 511 (914)
T ss_dssp HH--------HCSCCSEEECCTTTTSCCCTT---CCHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HH--------hCCcccccccCccccCCCCCC---cCHHHHHHHHHHHHHHhCCCCEEE
Confidence 88 988678999999999643221 125666778888899999998644
|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
Probab=82.81 E-value=3.3 Score=44.16 Aligned_cols=67 Identities=9% Similarity=0.063 Sum_probs=49.3
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+.+.+.|+.|+.+++|++-++. .|..+...|.-+..|.+.-.+.+..+++.|+++||.||..++
T Consensus 141 ~s~~~ik~~id~ma~~KlN~~h~hl-~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~rgI~vvpeI~ 207 (716)
T 2cho_A 141 WSHQARLSQLKFYGKNKMNTYIYGP-KDDPYHSAPNWRLPYPDKEAAQLQELVAVANENEVDFVWAIH 207 (716)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECC-TTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee-ccCcccccccccccCChhhHHHHHHHHHHHHHcCCEEEEeec
Confidence 3568899999999999999988754 333222112222346555567899999999999999999875
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=81.20 E-value=3.4 Score=40.52 Aligned_cols=53 Identities=13% Similarity=0.270 Sum_probs=39.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEec
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSL 131 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l 131 (436)
+.+.++++|+.|++.||+.+=+-.+.. +.+.+ +.|+.+++.|+++|+++.+++
T Consensus 101 D~~v~~~hi~~ak~aGIDgfal~w~~~----------~~~~d---~~l~~~~~aA~~~g~k~~f~~ 153 (382)
T 4acy_A 101 DPEIIRKHIRMHIKANVGVLSVTWWGE----------SDYGN---QSVSLLLDEAAKVGAKVCFHI 153 (382)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEECGG----------GGTTC---HHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCC----------CCchH---HHHHHHHHHHHHcCCEEEEEe
Confidence 568899999999999999887722110 11222 467889999999999998765
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=81.19 E-value=4.5 Score=39.64 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=40.1
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhh-hhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF-KGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l-~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+.+.++++|+.|++.||..+=+..+. ++ ...- ..|+.+++.|++.|+++.+++.
T Consensus 102 d~~v~~~h~~~Ak~aGIDgf~l~w~~----------~~---~~~d~~~l~~~l~aA~~~~~k~~f~~~ 156 (380)
T 4ad1_A 102 DPNILTKHMDMFVMARTGVLALTWWN----------EQ---DETEAKRIGLILDAADKKKIKVCFHLE 156 (380)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEECC----------CC---SHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecC----------CC---CcccHHHHHHHHHHHHHcCCeEEEEEC
Confidence 56889999999999999988773221 11 1112 4667899999999999987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 436 | ||||
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 2e-91 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 5e-59 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 1e-56 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 5e-35 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 1e-21 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 2e-11 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 5e-10 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 4e-08 | |
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 2e-07 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 9e-07 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 2e-06 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 5e-06 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 5e-06 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 3e-05 | |
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 2e-04 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 2e-04 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 2e-04 |
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 279 bits (713), Expect = 2e-91
Identities = 213/372 (57%), Positives = 272/372 (73%), Gaps = 3/372 (0%)
Query: 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA 89
+ F+ T G+HF LNG + NGFNAYWLMY+A DPS R KV+ F +A+ + + VARTWA
Sbjct: 1 NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWA 60
Query: 90 FSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149
FS GG RPLQ +PG YNEQMF+GLDFVI+EA+KYGI LI+SL NN+D+FGGKKQYV WA
Sbjct: 61 FSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAV 120
Query: 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209
+GQ LTSDDDFF NP+VKG+YKN +K VL R NT T + YKDDPTI++WEL+NEPRC S
Sbjct: 121 QRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPS 180
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269
D SG+T Q W+ EMA Y+KSID NHLLE GLEGFYG Q + GT+F++NN
Sbjct: 181 DLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYN--PNSYIFGTNFISNNQ 238
Query: 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329
+ GIDF T+H YP+QWL Q + + W+ HI D++ L+KP+L+AEFGKS K P
Sbjct: 239 VQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKM-LKKPLLIAEFGKSTKTP 297
Query: 330 GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTAN 389
GY+ +RD F +Y I++ AK GG GGLFWQ+L +GM +F DGY++VL +SPST+
Sbjct: 298 GYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSR 357
Query: 390 VITQQAHKLYQI 401
VI Q+ +L ++
Sbjct: 358 VILLQSLRLSKL 369
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 194 bits (494), Expect = 5e-59
Identities = 95/380 (25%), Positives = 146/380 (38%), Gaps = 54/380 (14%)
Query: 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA 89
F+ G+ F ++G + + G N YW ++ + + V + F +S GL V R W
Sbjct: 2 SSFVTISGTQFNIDGKVGYFAGTNCYWCSFLTN----HADVDSTFSHISSSGLKVVRVWG 57
Query: 90 FSDGGYRP-----------LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSF 138
F+D +P S + + LD+V+ A ++ +KLI+ NN+ +
Sbjct: 58 FNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDY 117
Query: 139 GGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMA 198
GG YVN ++ N + Y+ ++ V++ Y + I A
Sbjct: 118 GGINAYVNAFGGNAT------TWYTNTAAQTQYRKYVQAVVS--------RYANSTAIFA 163
Query: 199 WELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL 258
WEL NEPRC S I W T ++ YVKS+D NHL+ G EG +
Sbjct: 164 WELGNEPRCN-GCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTG--DGAYPYTY 220
Query: 259 DIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPIL 318
GTDF N I +DF T H YPD W + ++ N W+ TH KP +
Sbjct: 221 GEGTDFAKNVQIKSLDFGTFHLYPDSWGT------NYTWGNGWIQTHAAACLA-AGKPCV 273
Query: 319 LAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL---LTEGMDAFRD 375
E+G + + T G +FWQ G + D
Sbjct: 274 FEEYGAQQNPCTNEAPWQTTSLTT------------RGMGGDMFWQWGDTFANGAQSNSD 321
Query: 376 GYEIVLSQSPSTANVITQQA 395
Y + + S V
Sbjct: 322 PYTVWYNSSNWQCLVKNHVD 341
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 190 bits (482), Expect = 1e-56
Identities = 95/419 (22%), Positives = 167/419 (39%), Gaps = 61/419 (14%)
Query: 30 DGFIRTRGSHFLLNGNLYFANGFNAYWLMYVAS--DPSQRSKVSTAFHEAASHGLTVART 87
+ F+R G HF L G Y G N ++ Y+ + + R +++ + G+ R
Sbjct: 1 EHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRV 60
Query: 88 WAFSDG------GYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK 141
A S+ + G+Y+E + +GLD+++ E K + ++L N + GG
Sbjct: 61 LAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGM 120
Query: 142 KQYVNWARSQG-----------QFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190
QY+ W + F+ F+R+ + Y+ ++ ++ R N+ G Y
Sbjct: 121 TQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAY 180
Query: 191 KDDPTIMAWELMNEPRCTSDPSG----RTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQ 246
DD TIM+W+L NEPR + + + W+ A+Y+K++D +HL+ +G EG G
Sbjct: 181 VDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGS 240
Query: 247 STPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHI 306
+ F+ + P ID+ T H + W + ++ + W
Sbjct: 241 VNDMQ-----------VFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQN 289
Query: 307 QDAEHI-----LRKPILLAEFGKSRKDPGY----STYQRDVMFNTVYYKIYSSAKRGGAA 357
HI L KP++L EFG R Y +T RD F V+ + +S ++G +
Sbjct: 290 YMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPS 349
Query: 358 AGGLFWQLLTEGMDAF------------------RDGYEIVLSQSPSTANVITQQAHKL 398
AG W G G V ST ++ + +
Sbjct: 350 AGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAIMKEFNARF 408
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 130 bits (328), Expect = 5e-35
Identities = 54/367 (14%), Positives = 103/367 (28%), Gaps = 80/367 (21%)
Query: 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVAS-----DPSQRSKVSTAFHEAASHGLTVART 87
+ G++ NG+ F +G N W+ Y +S + + SHG R
Sbjct: 2 LSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRV 61
Query: 88 WAFSDGGYRPL---QRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144
W +G P + + + + A+++ I + +L N +
Sbjct: 62 WLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL 121
Query: 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNE 204
++ Y + +K + N K++ + W++MNE
Sbjct: 122 NGL-------------MVDTRKLQSYIDHALKPMANA--------LKNEKALGGWDIMNE 160
Query: 205 PRCTSDP--------------------------SGRTIQAWITEMASYVKSIDRNHLLEA 238
P P S + I ++ A+ +K +D ++
Sbjct: 161 PEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTV 220
Query: 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
G T N D + F VH+Y Q
Sbjct: 221 GSWNMKA-DTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQN-----------HF 268
Query: 299 NNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAA 358
N + L+KP+++ EF + S + + Y +
Sbjct: 269 GNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAYTKGY-------------S 315
Query: 359 GGLFWQL 365
G W
Sbjct: 316 GAWTWSR 322
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 93.6 bits (231), Expect = 1e-21
Identities = 52/363 (14%), Positives = 107/363 (29%), Gaps = 51/363 (14%)
Query: 28 AGDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPS--QRSKVSTAFHEAASHGLTV 84
AG G+ T G L N G N + + + S G
Sbjct: 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNT 60
Query: 85 AR----TWAFSDGGYRP----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136
R G Q + + +D ++A A + G+++IL
Sbjct: 61 IRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDC 120
Query: 137 SFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196
S ++ + V + + + ++ + YK +PT+
Sbjct: 121 SGQ------------------SALWYTSSVSEATWISDLQALAQ--------RYKGNPTV 154
Query: 197 MAWELMNEPRCTSDPSGRTIQ----AWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRK 252
+ ++L NEP + + V S++ N L+ Y +
Sbjct: 155 VGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWW- 213
Query: 253 RVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSS--NDRDQLSFLNNWLDTHIQDAE 310
NL + +P + H Y + +D + + + +
Sbjct: 214 --GGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLF 271
Query: 311 HILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370
+ P+ L EFG + + T+ + ++ + +A+ G + FW +
Sbjct: 272 NQNIAPVWLGEFGTTLQSTTDQTWLKTLV-----QYLRPTAQYGADSFQWTFWSWNPDSG 326
Query: 371 DAF 373
D
Sbjct: 327 DTG 329
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 62.8 bits (151), Expect = 2e-11
Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 20/163 (12%)
Query: 77 AASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136
GL+ R F+ + L+ PG + LD IA G+K++L
Sbjct: 23 MREAGLSHVRIGEFA---WALLEPEPGRLE---WGWLDEAIATLAAEGLKVVLGTPTATP 76
Query: 137 SFGGKKQYVNWAR-----SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191
+Y + +F F +PV + + ++ + R Y
Sbjct: 77 PKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAER--------YG 128
Query: 192 DDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNH 234
+ ++ NE C D ++++
Sbjct: 129 GLEAVAGFQTDNEYGCH-DTVRCYCPRCQEAFRGWLEARYGTI 170
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 57.9 bits (139), Expect = 5e-10
Identities = 34/300 (11%), Positives = 78/300 (26%), Gaps = 74/300 (24%)
Query: 31 GFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWA 89
G + + G G +++ L + Q + G+ V R
Sbjct: 7 GQLSISNGELVNERGEQVQLKGMSSHGLQWYG----QFVNYESMKWLRDDWGINVFRAAM 62
Query: 90 FSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149
++ G + + + + + A I +I+
Sbjct: 63 YTSSGG-------YIDDPSVKEKVKEAVEAAIDLDIYVIIDWHI---------------- 99
Query: 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS 209
+ K K+ + Y D P ++ +E+ NEP +
Sbjct: 100 ---------LSDNDPNIYKEEAKDFFDEMSELY--------GDYPNVI-YEIANEPNGSD 141
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269
G I+ + E+ +++ D N+++ G + A+N
Sbjct: 142 VTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQ---------------DVHHAADNQ 186
Query: 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329
+ + + + L+ I ++E+G S
Sbjct: 187 LADPNVMYAFHFYAGTHGQNLRDQVDYALDQG-------------AAIFVSEWGTSAATG 233
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 52.4 bits (124), Expect = 4e-08
Identities = 46/298 (15%), Positives = 84/298 (28%), Gaps = 47/298 (15%)
Query: 51 GFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVAR----TWAFSDGGYRPLQRSPGSYN 106
GFN S S + F A R +SD G +P
Sbjct: 6 GFNLLEAF---SIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRG------NPFIIR 56
Query: 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPV 166
E F+ +D VI KYGI + +S + S + + + +++
Sbjct: 57 EDFFEKIDRVIFWGEKYGIHICIS------------LHRAPGYSVNKEVEEKTNLWKDET 104
Query: 167 VKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCT--SDPSGRTIQAWITEMA 224
+ + + + R + T +++ L+NEP S + I
Sbjct: 105 AQEAFIHHWSFIARR-------YKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTI 157
Query: 225 SYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFA-----TVH 279
+ ++ ID L+ G+ N + ++ V
Sbjct: 158 TEIRKIDPERLIIIDGLGYGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVP 217
Query: 280 SYPDQWLSSS--NDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQ 335
+P+ W N L W+ + + E G K P +
Sbjct: 218 EWPNGWHFGEYWNREKLLEHYLTWIKLRQKG------IEVFCGEMGAYNKTPHDVVLK 269
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 50.6 bits (120), Expect = 2e-07
Identities = 26/207 (12%), Positives = 61/207 (29%), Gaps = 20/207 (9%)
Query: 32 FIRTRGSHFLLNGNLYFANGFNA-YWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAF 90
++ +NG + + VAS F + + G +
Sbjct: 5 YVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDI------FEKVKALGFNCVSFYVD 58
Query: 91 SDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
L+ +PG Y+ + L A++ GI L+ ++ + W +
Sbjct: 59 WAL----LEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQR 114
Query: 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS- 209
L + D+ + Y N+ T+ + I+ ++ NE
Sbjct: 115 VDGILRTSDEAYLKATDN-YASNIAATIAKAQ-------ITNGGPIILYQPENEYSGACC 166
Query: 210 DPSGRTIQAWITEMASYVKSIDRNHLL 236
+G +++ + + +
Sbjct: 167 GYNGFPDGSYMQYIEDHARDAGIVVPF 193
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 48.1 bits (113), Expect = 9e-07
Identities = 37/292 (12%), Positives = 75/292 (25%), Gaps = 61/292 (20%)
Query: 74 FHEAASHGLTVART----WAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
A G R G Y E +D + +KY + L+L
Sbjct: 34 IETIAEAGFDHVRLPFDYPIIESDDN------VGEYKEDGLSYIDRCLEWCKKYNLGLVL 87
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189
+ + + F +P + + ++ + +
Sbjct: 88 DMHHAPGYRFQDFKTSTL--------------FEDPNQQKRFVDIWRFLAK--------R 125
Query: 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTP 249
Y ++ +A+EL+N+ +P + E ++ ID L G +
Sbjct: 126 YINEREHIAFELLNQVV---EPDSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDEL 182
Query: 250 QRKRVNPNLDIGTDF-----------VANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFL 298
+ + I +F A+ + + YP Q+
Sbjct: 183 KNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKY 242
Query: 299 N------------NWLDTHIQDAEHILRK---PILLAEFGKSRKDPGYSTYQ 335
+ L ++ A K + EFG S +
Sbjct: 243 SFMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIK 294
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 46.8 bits (110), Expect = 2e-06
Identities = 32/298 (10%), Positives = 78/298 (26%), Gaps = 69/298 (23%)
Query: 33 IRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFS 91
+ + NG + G + Y + + AF + SHG R S
Sbjct: 4 LHVKNGRLYEANGQEFIIRGVSHPHNWY--------PQHTQAFADIKSHGANTVRV-VLS 54
Query: 92 DGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151
+G +++ + VI+ ++ + +L + +
Sbjct: 55 NGVR---------WSKNGPSDVANVISLCKQNRLICMLEVHDTTG--------------- 90
Query: 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP 211
+ + + + + + + NEP
Sbjct: 91 -------YGEQSGASTLDQAVDYWIELKSVL--------QGEEDYVLINIGNEPYGNDSA 135
Query: 212 SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP 271
+ + +++ H L + + D V +
Sbjct: 136 TVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQ-------DWTNTMRNNADQVYASDPT 188
Query: 272 GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP 329
G ++H Y +S+ + ++L+ + P+++ EFG D
Sbjct: 189 GNTVFSIHMYGVYSQAST--------ITSYLEHFVNA-----GLPLIIGEFGHDHSDG 233
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 45.9 bits (108), Expect = 5e-06
Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 24/200 (12%)
Query: 142 KQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI--HYKDDPTIMAW 199
VN +G + D + YY ++I + + + + + +P ++ +
Sbjct: 75 IATVNAITQKGAYAVVDPHNY-----GRYYNSIISSPSDFETFWKTVASQFASNPLVI-F 128
Query: 200 ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLD 259
+ NE D + ++S +EG VN N+
Sbjct: 129 DTDNEYH---DMDQTLVLNLNQAAIDGIRSAGATSQY-IFVEGNSWTGAWTWTNVNDNMK 184
Query: 260 IGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILR---KP 316
TD ++ +I +H Y D S ++ + I A LR K
Sbjct: 185 SLTDP-SDKII-----YEMHQYLDSDGSGTSATC---VSSTIGQERITSATQWLRANGKK 235
Query: 317 ILLAEFGKSRKDPGYSTYQR 336
++ EF + +
Sbjct: 236 GIIGEFAGGADNVCETAITG 255
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 45.6 bits (107), Expect = 5e-06
Identities = 29/204 (14%), Positives = 54/204 (26%), Gaps = 43/204 (21%)
Query: 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSD 92
+ G+ L G G + +W + T T+ R
Sbjct: 5 LTVSGNQILAGGENTSFAGPSLFWSNTGWGAEKFYTA-ETVAKAKTEFNATLIRAAI--- 60
Query: 93 GGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQG 152
G S E LD V VN A ++
Sbjct: 61 GHGTSTGGSLNFDWEGNMSRLDTV----------------------------VNAAIAED 92
Query: 153 QFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPS 212
++ D + + V +Y + +E+ NEP S
Sbjct: 93 MYVIIDFHSHEAHTDQATAVRFFEDVATKYG---------QYDNVIYEIYNEPLQISWV- 142
Query: 213 GRTIQAWITEMASYVKSIDRNHLL 236
I+ + + +++ID ++L+
Sbjct: 143 -NDIKPYAETVIDKIRAIDPDNLI 165
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 43.3 bits (101), Expect = 3e-05
Identities = 31/240 (12%), Positives = 57/240 (23%), Gaps = 31/240 (12%)
Query: 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
F G+ R ++D G N+ + + A G+KL+
Sbjct: 44 FKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNND--LEKAIQIGKRATANGMKLLADF-- 99
Query: 134 NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193
+Y F WA Q +++ +
Sbjct: 100 HYSDF--------WADPAKQKAPKA-------WANLNFEDKKTALYQYTKQSLKAMKAAG 144
Query: 194 PTIMAWELMNEPRCT--SDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQR 251
I ++ NE + + + V+ D N L+ S
Sbjct: 145 IDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNP-ETSGRYA 203
Query: 252 KRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEH 311
D+ D YP + N L+ + + + AE
Sbjct: 204 WIAETLHRHHVDY---------DVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAET 254
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 43/310 (13%), Positives = 87/310 (28%), Gaps = 42/310 (13%)
Query: 74 FHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133
F AS G + R ++ L P Q LD I AR +K+ + L
Sbjct: 79 FANIASQGFNLVR-IPIGYWAFQILDDDPYVSGLQESY-LDQAIGWARNNSLKVWVDLHG 136
Query: 134 NYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193
G + + N D + N++ +L +Y+ +
Sbjct: 137 AA---GSQNGFDNSGLRDSYKFLEDSNLAV-------TINVLNYILKKYS-----AEEYL 181
Query: 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253
++ EL+NEP + ++ Y+++ ++ + + F
Sbjct: 182 DIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQP-------- 233
Query: 254 VNPNLDIGTDFVANNLIPGIDFATVHSYP--DQWLSSSNDRDQLSFLNNWLDTHIQDAEH 311
+ DF+ N H Y + + + W + +
Sbjct: 234 ----YNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNE--- 286
Query: 312 ILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGL----FWQLLT 367
I+ EF + D + V F Y + + + + G +
Sbjct: 287 --SHWIVCGEFAAALTDCI--KWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWS 342
Query: 368 EGMDAFRDGY 377
+ Y
Sbjct: 343 DERKENTRRY 352
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 27/167 (16%)
Query: 74 FHEAASHGLTVAR----TWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129
F + ++ GL R WAF Y + + L+ + ARK I++ +
Sbjct: 74 FKQISNLGLNFVRIPIGYWAFQLLD-------NDPYVQGQVQYLEKALGWARKNNIRVWI 126
Query: 130 SLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189
L S G D F+N N++ T+ +Y
Sbjct: 127 DLHGAPGSQNGFDNSGLR----------DSYNFQNGDNTQVTLNVLNTIFKKYGG----- 171
Query: 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLL 236
+ ++ EL+NEP + ++ + + + ++ +
Sbjct: 172 NEYSDVVIGIELLNEPLGPVLNMDK-LKQFFLDGYNSLRQTGSVTPV 217
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 24/206 (11%), Positives = 55/206 (26%), Gaps = 49/206 (23%)
Query: 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTW--AF 90
+ G+ G + +W + T ++ R
Sbjct: 5 LSVNGNKIYAGEKAKSFAGNSLFWSNNGWGGEKFYTA-DTVASLKKDWKSSIVRAAMGVQ 63
Query: 91 SDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150
GGY ++ V+ A + I+ + S +
Sbjct: 64 ESGGYL-------QDPAGNKAKVERVVDAAIANDMYAII----GWHSHSAENNRSEA--- 109
Query: 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD 210
+ + +Y + + +E+ NEP S
Sbjct: 110 ---------------------IRFFQEMARKYG---------NKPNVIYEIYNEPLQVSW 139
Query: 211 PSGRTIQAWITEMASYVKSIDRNHLL 236
+ TI+ + + S +++ID ++L+
Sbjct: 140 SN--TIKPYAEAVISAIRAIDPDNLI 163
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 436 | |||
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 100.0 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 99.97 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 99.97 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.97 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 99.97 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.97 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 99.95 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 99.95 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 99.95 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.91 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 99.91 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 99.89 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.89 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.87 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 99.86 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.85 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.84 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.83 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.83 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.83 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.82 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.81 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 99.81 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.8 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.8 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.8 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 99.8 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.78 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 99.78 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.78 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 99.77 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.77 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.73 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.73 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.73 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 99.57 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 99.56 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 99.51 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 99.5 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 99.5 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 99.39 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 99.37 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 99.22 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 99.13 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 99.12 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 99.01 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 98.61 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.5 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 98.41 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 98.36 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 98.33 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 98.29 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 98.27 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 98.03 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 98.01 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 96.65 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 96.56 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 96.49 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 96.33 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 96.33 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 96.29 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 96.25 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 96.21 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 96.16 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 96.14 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 96.05 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.68 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 95.58 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 95.55 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.48 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 95.47 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 95.44 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 95.39 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 95.39 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 95.16 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 94.91 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 94.8 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 94.8 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 94.68 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 94.37 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 94.3 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.22 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 94.22 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 94.2 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 94.16 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 93.81 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 93.72 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 93.6 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 93.52 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 93.22 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 92.98 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 92.94 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 91.74 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 91.61 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 90.26 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 90.05 | |
| d1h41a1 | 561 | alpha-D-glucuronidase catalytic domain {Pseudomona | 86.63 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 86.4 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 85.98 | |
| d1cnva_ | 283 | Seed storage protein {Jack bean (Canavalia ensifor | 84.23 | |
| d1l8na1 | 536 | alpha-D-glucuronidase catalytic domain {Bacillus s | 83.72 | |
| d2q02a1 | 271 | Putative cytoplasmic protein STM4435 {Salmonella t | 83.49 | |
| d1nowa1 | 353 | beta-hexosaminidase B {Human (Homo sapiens) [TaxId | 80.28 |
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=5.1e-57 Score=446.33 Aligned_cols=368 Identities=59% Similarity=1.068 Sum_probs=317.3
Q ss_pred CCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhh
Q 013811 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF 110 (436)
Q Consensus 31 ~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l 110 (436)
.||+|+|++|++||+|+++.|+|.||......+..+++.++++|+.||++|+|+||+|++.+..+...++.||.+++..|
T Consensus 2 ~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l 81 (370)
T d1rh9a1 2 NFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMF 81 (370)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHH
T ss_pred CcEEEECCEEEECCEEEEEEEEecccCcccccCCCCHHHHHHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHH
Confidence 59999999999999999999999998776544444668899999999999999999999887777888999999999999
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
+.||++|++|+++||+|+++||++|..++|.+.|..|....|........||+||...+.++++++.+++|.|+++...|
T Consensus 82 ~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~ 161 (370)
T d1rh9a1 82 QGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAY 161 (370)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBG
T ss_pred HHHHHHHHHHHHcCCEEEEecccccccccCCcccccccccCCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhh
Confidence 99999999999999999999999998888999999998877665556678999999999999999999999999999999
Q ss_pred CCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCC-CcccchhhhhcC
Q 013811 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN-LDIGTDFVANNL 269 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~-~~~g~df~~~~~ 269 (436)
+++|+|++|+++|||......+.+.+.+|++++++.||++||+++|+++.+++....... .++. ...+.+......
T Consensus 162 ~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 238 (370)
T d1rh9a1 162 KDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQ---YNPNSYIFGTNFISNNQ 238 (370)
T ss_dssp GGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGGG---GSGGGCCCSCCHHHHHT
T ss_pred cCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhhCCCCeEEEeccccccccccc---cCCCccccccccccccc
Confidence 999999999999999887665678899999999999999999999999887654332211 1111 123345555567
Q ss_pred CCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 013811 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 270 ~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~ 349 (436)
.+.+||+++|.||+.|.+.........+...|+..+.+.+.. .+|||+|+|||......+.+...++.+++.++..+++
T Consensus 239 ~~~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (370)
T d1rh9a1 239 VQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKM-LKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFN 317 (370)
T ss_dssp STTCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHH-HTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEeccccCccccCCcchhhhhHHHHHHHHHHHHHHh-CCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 789999999999987776555444456667777777777776 8999999999998877777888899999999999988
Q ss_pred HhhcCCCccceeecccccCCCCCCCCCceEEeCCCcCHHHHHHHHHHHHHhhh
Q 013811 350 SAKRGGAAAGGLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQIR 402 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~~~d~~~~~li~~~~~~~~~~~ 402 (436)
+++.+..++|+++|++.+++.+.|+|||+|++.++++|.++|.++++||++|+
T Consensus 318 ~~~~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 318 CAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp HHHTTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCCCeEEEEEeeecCCCCcCCCCCceEecCCCccHHHHHHHHHHHHhhcC
Confidence 88887788999999999998888999999999999999999999999999874
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=1.4e-46 Score=374.58 Aligned_cols=357 Identities=26% Similarity=0.502 Sum_probs=284.2
Q ss_pred CCEEeeCCeEEECCeEEEEEeecccccccccC--CcchhhhHHHHHHHHHHCCCCEEEEccccCC------CCCCCccCC
Q 013811 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVAS--DPSQRSKVSTAFHEAASHGLTVARTWAFSDG------GYRPLQRSP 102 (436)
Q Consensus 31 ~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~--~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~------~~~~lq~~p 102 (436)
.||+++|++|++||||++++|+|+||...... ...+++.++++|+.||++|+|+||+|++.+. .++.+++.+
T Consensus 2 ~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~ 81 (410)
T d1uuqa_ 2 HFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF 81 (410)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST
T ss_pred CCEEEECCEEEECCEEEEEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCcccccccccccCCCccccc
Confidence 59999999999999999999999988765433 2346789999999999999999999987543 356788999
Q ss_pred CCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCC-----------CCCCCCCChHHHHHH
Q 013811 103 GSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLT-----------SDDDFFRNPVVKGYY 171 (436)
Q Consensus 103 g~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~-----------~~~~f~~~~~~~~~~ 171 (436)
|.||+..|..||++|++|+++||+||++||.+|..+++.+.|+.|......... ....+++++.+++.+
T Consensus 82 g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (410)
T d1uuqa_ 82 GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEY 161 (410)
T ss_dssp TCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccccccccCCCcCccccccccccccccccccccCHHHHHHH
Confidence 999999999999999999999999999999999888999999999764321100 113578899999999
Q ss_pred HHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCC----hHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCC
Q 013811 172 KNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPS----GRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQS 247 (436)
Q Consensus 172 ~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~----~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~ 247 (436)
+++++.+++|.|+++.+.++++|+|++|+|.|||.+..... .+.+..|.++++++||++||+++|++|..++....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~ 241 (410)
T d1uuqa_ 162 RKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSV 241 (410)
T ss_dssp HHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTT
T ss_pred HHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcccccchhhhhHHHHHHHhhhhhcCCCceEeeccccccccc
Confidence 99999999999999999999999999999999999875432 35678899999999999999999999887654322
Q ss_pred CCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChh------HhHHHHHHHHHHHHHHHHHhcCCcEEEEe
Q 013811 248 TPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDR------DQLSFLNNWLDTHIQDAEHILRKPILLAE 321 (436)
Q Consensus 248 ~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~------~~~~~~~~~i~~~~~~a~~~~~kPv~i~E 321 (436)
. ....+......+.+||+++|.||..+....... ........++..+...+.. .+||++|+|
T Consensus 242 ~-----------~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kPv~i~E 309 (410)
T d1uuqa_ 242 N-----------DMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQ-LNKPLVLEE 309 (410)
T ss_dssp T-----------CHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred c-----------cccchhhhccCCccceEEeecCcccccccccccccccccchhhhhHHHHHHHHHHHhh-cCCCeeeec
Confidence 1 122344456678899999999998765443211 1223445566666666665 899999999
Q ss_pred cCCCCCC----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCC-----CCC-------------CCceE
Q 013811 322 FGKSRKD----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMD-----AFR-------------DGYEI 379 (436)
Q Consensus 322 fG~~~~~----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~-----~~~-------------dg~~i 379 (436)
||..... .+.....++++++.+++.+++++..+..++|+++|+|.+.+.+ .|. .|+..
T Consensus 310 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 389 (410)
T d1uuqa_ 310 FGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYG 389 (410)
T ss_dssp ECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSC
T ss_pred cccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCCCCCCCCCCCCCCCCCCCCCCcccCceEE
Confidence 9987653 2245678889999999999999888888999999999775431 111 13345
Q ss_pred EeCCCcCHHHHHHHHHHHHH
Q 013811 380 VLSQSPSTANVITQQAHKLY 399 (436)
Q Consensus 380 ~~~~d~~~~~li~~~~~~~~ 399 (436)
+..+|.+|..+|+++.++++
T Consensus 390 ~~~~d~~~~~~~~~~~~~~~ 409 (410)
T d1uuqa_ 390 VFDTDTSTIAIMKEFNARFQ 409 (410)
T ss_dssp EETTCHHHHHHHHHHHHHHC
T ss_pred EECCCCcHHHHHHHHHHhcC
Confidence 66778999999999998874
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=100.00 E-value=1e-46 Score=370.12 Aligned_cols=329 Identities=28% Similarity=0.549 Sum_probs=253.5
Q ss_pred CCCCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCC---------C--C
Q 013811 29 GDGFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGY---------R--P 97 (436)
Q Consensus 29 ~~~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~---------~--~ 97 (436)
+++||+|+|.+|++||+||++.|+|+||+.... +++.++++|+.|+++|+|+||+|++.+... . .
T Consensus 1 ~~~~v~~~g~~f~~nG~p~~~~G~N~~~~~~~~----~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~ 76 (344)
T d1qnra_ 1 ASSFVTISGTQFNIDGKVGYFAGTNCYWCSFLT----NHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLS 76 (344)
T ss_dssp CCCCCEEETTEEEETTEESCEEEEECGGGGGCC----CHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECC
T ss_pred CCCcEEEECCEEEECCEEEEEEEEccCCCCcCC----CHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcc
Confidence 367999999999999999999999999887643 457899999999999999999998643210 0 1
Q ss_pred CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHH
Q 013811 98 LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKT 177 (436)
Q Consensus 98 lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~ 177 (436)
.+..+..++++.++.||+++++|+++||+++++||++|..+++.+.|+.|... ....||+++..++.+++++++
T Consensus 77 ~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 150 (344)
T d1qnra_ 77 ATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGG------NATTWYTNTAAQTQYRKYVQA 150 (344)
T ss_dssp TTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCS------CTTGGGGCHHHHHHHHHHHHH
T ss_pred cccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCcccccccccccccccc------ccccccCCHHHHHHHHHHHHH
Confidence 12233468889999999999999999999999999999888888888776532 346789999999999999999
Q ss_pred HHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCC
Q 013811 178 VLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPN 257 (436)
Q Consensus 178 iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~ 257 (436)
+++| ||++|+|++|+|+|||..... +......|+++++++||+.||+|+|+++.+++........ ....
T Consensus 151 ~~~r--------~~~~p~v~~~~l~NEp~~~~~-~~~~~~~~~~~~~~~ir~~d~~~~v~~~~~~~~~~~~~~~--~~~~ 219 (344)
T d1qnra_ 151 VVSR--------YANSTAIFAWELGNEPRCNGC-STDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGA--YPYT 219 (344)
T ss_dssp HHHH--------HTTCTTEEEEESCBSCCCTTC-CTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCCC--GGGS
T ss_pred HHHH--------hCCCCceeeeccCCccCCCCC-chhhhhHHHHHHHHHHHhhCCCCEEEEccccccccccccc--cccc
Confidence 9999 999999999999999987654 3567899999999999999999999998876543322110 0111
Q ss_pred CcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHH
Q 013811 258 LDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRD 337 (436)
Q Consensus 258 ~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~ 337 (436)
+..+.|+......+.+||+++|.||..|.... .+...++..+++.+.+ .+|||+|+|||...+. .....
T Consensus 220 ~~~~~d~~~~~~~~~~D~~~~H~Y~~~~~~~~------~~~~~~~~~~~~~~~~-~~kPv~v~EfG~~~~~----~~~~~ 288 (344)
T d1qnra_ 220 YGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNY------TWGNGWIQTHAAACLA-AGKPCVFEEYGAQQNP----CTNEA 288 (344)
T ss_dssp SSSSCCHHHHHTCTTCCSEEEEECHHHHTCCS------THHHHHHHHHHHHHHH-TTSCEEEEEECCSSCH----HHHHH
T ss_pred cccccchhhcccCCCceEEEEeecCcccccch------hHHHHHHHHHHHHHhh-cCCCEEEEecCcCCCC----CccHH
Confidence 34566787778889999999999997776442 2345566666666665 8999999999997642 11111
Q ss_pred HHHHHHHHHHHHHhhcCCCccceeecccccC---CCCCCCCCceEEeCCCcCHHHHHHHHHHHH
Q 013811 338 VMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE---GMDAFRDGYEIVLSQSPSTANVITQQAHKL 398 (436)
Q Consensus 338 ~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~---g~~~~~dg~~i~~~~d~~~~~li~~~~~~~ 398 (436)
.++. ++ . .....+|+++|++.+. +...+.|||++++.+ +....++.+|+++|
T Consensus 289 ~~~~-~~----~---~~~~~~G~~~W~~~~~~~~g~~~~~d~~~~~~~~-~~~~~~~~~~~~~~ 343 (344)
T d1qnra_ 289 PWQT-TS----L---TTRGMGGDMFWQWGDTFANGAQSNSDPYTVWYNS-SNWQCLVKNHVDAI 343 (344)
T ss_dssp HHHH-HH----H---TSTTEEEEEESCEECBCTTSCBCCCCTTCEETTS-HHHHHHTHHHHHHH
T ss_pred HHHH-HH----H---hccCcceEEEEEcCcccCCCCccCCCCCEEECCC-ccHHHHHHHHHHhh
Confidence 1111 11 1 1236789999999875 334556899998874 46788999999876
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=100.00 E-value=8.3e-35 Score=282.42 Aligned_cols=288 Identities=18% Similarity=0.291 Sum_probs=199.6
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCC-----cchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCC---ccCCCC
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASD-----PSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPL---QRSPGS 104 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~-----~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~l---q~~pg~ 104 (436)
|+|+|++|++|||||+++|+|++|..+...- ..+.+.++++|+.||++|+|+||+|++.++...+. ...+..
T Consensus 2 ~~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~ 81 (350)
T d2c0ha1 2 LSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTG 81 (350)
T ss_dssp EEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEE
T ss_pred EEEECCEEEECCEEEEEEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCc
Confidence 8999999999999999999999887653211 12567899999999999999999998876533221 223445
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
++++.++.+|+++++|+++||+|++++|+.+...++...+. ..+++++..++.+.++++.|++|
T Consensus 82 ~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~a~r--- 145 (350)
T d2c0ha1 82 IDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLN-------------GLMVDTRKLQSYIDHALKPMANA--- 145 (350)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHHH-------------HHHHCHHHHHHHHHHTHHHHHHH---
T ss_pred cChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCcccC-------------cccCCCHHHHHHHHHHHHHHHHH---
Confidence 78899999999999999999999999998765433332221 23456788899999999999999
Q ss_pred ccccccCCCCcEEEEEeecCCCCCCCC--------------------------ChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 185 FTGIHYKDDPTIMAWELMNEPRCTSDP--------------------------SGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 185 ~tg~~yk~~p~I~~weL~NEp~~~~~~--------------------------~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
|+++|+|++|+|+|||...... ....+..|+..++++||+.||+++|++
T Consensus 146 -----~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~v~~ 220 (350)
T d2c0ha1 146 -----LKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTV 220 (350)
T ss_dssp -----HTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred -----hCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHhCCCceEEe
Confidence 9999999999999999743210 135688999999999999999999998
Q ss_pred CCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCC--CChhHhHHHHHHHHHHHHHHHHHhcCCc
Q 013811 239 GLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSS--SNDRDQLSFLNNWLDTHIQDAEHILRKP 316 (436)
Q Consensus 239 G~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~--~~~~~~~~~~~~~i~~~~~~a~~~~~kP 316 (436)
+..+....... ....++..............+..|++++|.|+..-... ...... .... ..+||
T Consensus 221 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~~~~~------------~~~~-~~~kP 286 (350)
T d2c0ha1 221 GSWNMKADTDA-MGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKHS------------FSNF-RLKKP 286 (350)
T ss_dssp EESCGGGBCSS-TTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTSSC------------GGGG-CCSSC
T ss_pred cccccCcCccc-ccccccccccccchhhcccccccceeccccCCCCCcchhhhhHHHH------------HHhc-cCCCc
Confidence 86554222111 00111110000111223446778999999998421111 110000 0111 27899
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 317 ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 317 v~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
|+|+|||....... ....+ ++.+.+. +.+|+++|++.+.
T Consensus 287 v~igEfg~~~~~~~----~~~~~----~~~~~~~-----~~~G~~~W~~~d~ 325 (350)
T d2c0ha1 287 MVIGEFNQEHGAGM----SSESM----FEWAYTK-----GYSGAWTWSRTDV 325 (350)
T ss_dssp EEEEECCGGGSTTC----CHHHH----HHHHHHT-----TCSEEEESCSSSS
T ss_pred EEEEecCCCCCCCc----cHHHH----HHHHHHh-----CCeEEEEEeeecC
Confidence 99999998765322 12223 2322222 6789999999885
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=1.1e-32 Score=271.33 Aligned_cols=306 Identities=17% Similarity=0.169 Sum_probs=194.6
Q ss_pred CCCCEEeeCCeEEE-CCeEEEEEeecccccccccCCc--chhhhHHHHHHHHHHCCCCEEEEcccc----CCCC----CC
Q 013811 29 GDGFIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDP--SQRSKVSTAFHEAASHGLTVARTWAFS----DGGY----RP 97 (436)
Q Consensus 29 ~~~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~--~~~~~~~~~l~~l~~~G~N~vRi~~~~----d~~~----~~ 97 (436)
..||++|+|++|+. +|++++++|+|.+........+ .....++++|+.||++|+|+|||++.. +... ..
T Consensus 2 ~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~ 81 (358)
T d1ecea_ 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINF 81 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCC
T ss_pred CCCeEEeeCCEEECCCCCEEEEEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccc
Confidence 46899999999985 9999999999954333321111 234668999999999999999996532 1111 11
Q ss_pred CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHH
Q 013811 98 LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKT 177 (436)
Q Consensus 98 lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~ 177 (436)
.+..|..+.+..++.||++|++|+++||+|||+||..... + ....+++++..++.+.+.++.
T Consensus 82 ~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~ 143 (358)
T d1ecea_ 82 YQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCS--G----------------QSALWYTSSVSEATWISDLQA 143 (358)
T ss_dssp SSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTT--B----------------CCSSSCCSSSCHHHHHHHHHH
T ss_pred cccChhhhchhHHHHHHHHHHHHHHCCCceeeeccccccc--C----------------CCccccCChHHHHHHHHHHHH
Confidence 2234455667889999999999999999999999864211 0 123456667778889999999
Q ss_pred HHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCcccc
Q 013811 178 VLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253 (436)
Q Consensus 178 iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~ 253 (436)
|++| |+++|+|++|||+|||...... ....+..++++++++||+.||+++|.++..+........ +.
T Consensus 144 ia~~--------~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~-~~ 214 (358)
T d1ecea_ 144 LAQR--------YKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYW-WG 214 (358)
T ss_dssp HHHH--------TTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECS-TT
T ss_pred HHHh--------hcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCcccccc-cc
Confidence 9999 9999999999999999875421 234578899999999999999999998765432211100 00
Q ss_pred CCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCC---hhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC
Q 013811 254 VNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSN---DRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG 330 (436)
Q Consensus 254 ~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~---~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g 330 (436)
.+. ............+..+++++|.|+..+.+... ..........+.......+.+ .++||+|+|||......
T Consensus 215 ~~~--~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~- 290 (358)
T d1ecea_ 215 GNL--QGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQ-NIAPVWLGEFGTTLQST- 290 (358)
T ss_dssp TBC--TTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHT-TSSCEEEEECCCCCCSH-
T ss_pred ccc--cchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHh-cCCeEEEecCCCCCCCC-
Confidence 000 00001111122345568999999864432210 000011122222222223333 78999999999876531
Q ss_pred CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 331 YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 331 ~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
...++.+.+.+.+...........||++|+|..+.
T Consensus 291 ----~~~~~~~~~~~~~~~~~~~~~~~~gw~~W~~k~~~ 325 (358)
T d1ecea_ 291 ----TDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS 325 (358)
T ss_dssp ----HHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSCC
T ss_pred ----ChHHHHHHHHHHHHHHHHhcccCceEEEEcCCCCC
Confidence 22233332222111111112356799999998753
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=8.1e-33 Score=266.37 Aligned_cols=258 Identities=15% Similarity=0.119 Sum_probs=177.9
Q ss_pred CEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCCCChhhh
Q 013811 32 FIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF 110 (436)
Q Consensus 32 fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l 110 (436)
.|+|+|++|++||+|++|+|+|.+|....... +.-..+++++.|+ ++|+|+||+++..+. .....++..++..+
T Consensus 4 ~l~v~G~~i~~nG~~v~l~Gvn~~~~~~~~~~--~~~~~~~~~~~l~~~~g~N~VR~~~~~~~---~~~~~~~~~~~~~l 78 (293)
T d1tvna1 4 KLTVSGNQILAGGENTSFAGPSLFWSNTGWGA--EKFYTAETVAKAKTEFNATLIRAAIGHGT---STGGSLNFDWEGNM 78 (293)
T ss_dssp CEEEETTEEEETTEECCCEEEEECCCCTTSSC--GGGCSHHHHHHHHHHHCCSEEEEEEECCT---TSTTSTTTCHHHHH
T ss_pred eEEEECCEEeeCCcEEEEEEeecCCcCCCcCC--CcccCHHHHHHHHHhCCCcEEEEeccccc---ccccccccCcHHHH
Confidence 59999999999999999999999877543211 1122345556665 689999999654221 11113445678899
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
+.||++|++|+++||+|||++|++-. ...++.+.+++++|++| |
T Consensus 79 ~~ld~~v~~a~~~gi~vild~h~~~~----------------------------~~~~~~~~~~w~~~a~r--------~ 122 (293)
T d1tvna1 79 SRLDTVVNAAIAEDMYVIIDFHSHEA----------------------------HTDQATAVRFFEDVATK--------Y 122 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECSCG----------------------------GGCHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHHcCCEEEecCccCCC----------------------------cccHHHHHHHHHHHHHH--------h
Confidence 99999999999999999999986410 11246788899999999 9
Q ss_pred CCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCC
Q 013811 191 KDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLI 270 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~ 270 (436)
|++|+|+ |+|+|||.+.. ....+.+++++++++||+.||+++|.+++.++..... .+......
T Consensus 123 k~~~~V~-~el~NEP~~~~--~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~~~--------------~~~~~~~~ 185 (293)
T d1tvna1 123 GQYDNVI-YEIYNEPLQIS--WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVD--------------VASQNPID 185 (293)
T ss_dssp TTCTTEE-EECCSCCCSCC--TTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCHH--------------HHHHSCCC
T ss_pred CCCCeEE-EEEecccCCCC--cHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccccc--------------hhhcCCcc
Confidence 9999997 99999998764 2457899999999999999999999998755422100 01111122
Q ss_pred CCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHH
Q 013811 271 PGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSS 350 (436)
Q Consensus 271 ~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~ 350 (436)
...+++++|.|+.... ++..++++.+.+ .++||+|+|||.....+... ....+++.+++.+.+
T Consensus 186 ~~~~v~s~H~Y~~~~~-------------~~~~~~~~~~~~-~g~Pv~vgEfG~~~~~~~~~--~~~~~~~~~~~~~~~- 248 (293)
T d1tvna1 186 RANIAYTLHFYAGTHG-------------QSYRNKAQTALD-NGIALFATEWGTVNADGNGG--VNINETDAWMAFFKT- 248 (293)
T ss_dssp SSSEEEEEEEETTTCC-------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSC--CCHHHHHHHHHHHHH-
T ss_pred CCCceEEEEeeccccc-------------hHHHHHHHHHHh-cCCCeEeeccCCcccCCCCC--CCHHHHHHHHHHHHH-
Confidence 3456889999986311 122334444554 79999999999875432111 112333434443322
Q ss_pred hhcCCCccceeecccccCC
Q 013811 351 AKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 351 ~~~~~~~~G~~~W~~~~~g 369 (436)
...|+++|+|.+..
T Consensus 249 -----~~igw~~W~~~d~~ 262 (293)
T d1tvna1 249 -----NNISHANWALNDKN 262 (293)
T ss_dssp -----HTCCEEEEEESCSS
T ss_pred -----hCCeEEEEEeecCC
Confidence 24699999998754
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=2.3e-32 Score=262.90 Aligned_cols=254 Identities=13% Similarity=0.151 Sum_probs=176.4
Q ss_pred CEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCC--CCChh
Q 013811 32 FIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPG--SYNEQ 108 (436)
Q Consensus 32 fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg--~~~~~ 108 (436)
.|+|+|++|++||+|++|+|+|.+|...... ......+++++.|+ ++|+|+||+++..+. ..+ ..++.
T Consensus 4 ~l~v~G~~~~~nG~~v~l~G~n~~~~~~~~~--~~~~~~~~~~~~l~~~~G~N~vR~~~~~~~-------~~~~~~~~~~ 74 (291)
T d1egza_ 4 PLSVNGNKIYAGEKAKSFAGNSLFWSNNGWG--GEKFYTADTVASLKKDWKSSIVRAAMGVQE-------SGGYLQDPAG 74 (291)
T ss_dssp CEEEETTEEEETTEECCCEEEEEEECCTTSS--GGGGCSHHHHHHHHHTTCCCEEEEEEECSS-------TTSTTTCHHH
T ss_pred cEEEECCEEEECCcEEEEEEEecCCcCCCcC--CccccCHHHHHHHHHhcCCCEEEEeccccc-------cCCcccCcHH
Confidence 4999999999999999999999988654311 12233457777877 589999999764321 111 12356
Q ss_pred hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 109 MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 109 ~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
.++.||++|++|.++||+|||++|+.- .....+.+.++++.+++|
T Consensus 75 ~~~~ld~vv~~a~~~Giyvild~h~~~----------------------------~~~~~~~~~~~w~~la~r------- 119 (291)
T d1egza_ 75 NKAKVERVVDAAIANDMYAIIGWHSHS----------------------------AENNRSEAIRFFQEMARK------- 119 (291)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSC----------------------------GGGGHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHCCCeEeeeeccCC----------------------------CcccHHHHHHHHHHHHHH-------
Confidence 799999999999999999999998641 012245678999999999
Q ss_pred ccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc
Q 013811 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN 268 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~ 268 (436)
||++|+|+ |+|+|||.+.. ..+.+..++++++++||+.||+++|.+++.++.+... ......
T Consensus 120 -yk~~p~v~-~el~NEP~~~~--~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~--------------~~~~~~ 181 (291)
T d1egza_ 120 -YGNKPNVI-YEIYNEPLQVS--WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVD--------------EASRDP 181 (291)
T ss_dssp -HTTSTTEE-EECCSCCCSCC--TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHH--------------HHHTSC
T ss_pred -hCCCccee-eeeccCcCCCc--chhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccccc--------------hhhhcc
Confidence 99999985 99999998754 2456889999999999999999999998755422110 000111
Q ss_pred CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 013811 269 LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIY 348 (436)
Q Consensus 269 ~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~ 348 (436)
.....+++++|.|+.... . ++.+.++.+.. .++||+|+|||.....+... ....+++.+++.+.
T Consensus 182 ~~~~n~vys~H~Y~~~~~-----~--------~~~~~~~~~~~-~~~Pv~vgEfG~~~~~~~~~--~~~~~~~~~~~~~~ 245 (291)
T d1egza_ 182 INAKNIAYTLHFYAGTHG-----E--------SLRNKARQALN-NGIALFVTEWGTVNADGNGG--VNQTETDAWVTFMR 245 (291)
T ss_dssp CCSSSEEEEEEEETTTCC-----H--------HHHHHHHHHHH-TTCCEEEEEEESSCTTSCSC--CCHHHHHHHHHHHH
T ss_pred cCCCcEEEEecccCCCCc-----h--------hHHHHHHHHHH-cCCCeEecccCCcccCCCCC--cCHHHHHHHHHHHH
Confidence 224567999999976311 1 12233344444 79999999999875432111 11233344444332
Q ss_pred HHhhcCCCccceeecccccCC
Q 013811 349 SSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 349 ~~~~~~~~~~G~~~W~~~~~g 369 (436)
+ ...|+++|+|.+.+
T Consensus 246 ~------~~i~w~~W~~~~~~ 260 (291)
T d1egza_ 246 D------NNISNANWALNDKN 260 (291)
T ss_dssp H------TTCCEEEEEECCSS
T ss_pred H------cCCeEEEEeeeCCC
Confidence 2 34699999998643
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=99.97 E-value=2e-31 Score=257.34 Aligned_cols=257 Identities=15% Similarity=0.160 Sum_probs=177.7
Q ss_pred CCCCEEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHH-HCCCCEEEEccccCCCCCCCccCCCCCC
Q 013811 29 GDGFIRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAA-SHGLTVARTWAFSDGGYRPLQRSPGSYN 106 (436)
Q Consensus 29 ~~~fv~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~N~vRi~~~~d~~~~~lq~~pg~~~ 106 (436)
..|+++|+|++|+ .||+|++++|+|.++..... ...-+++|+.++ ++|+|+||++++.+. ....++
T Consensus 5 ~~g~l~v~g~~ivd~nG~~v~lrGvn~~~~~~~~-----~~~~~~~~~~l~~~~G~N~VR~~~~~~~-------~~~~~~ 72 (300)
T d7a3ha_ 5 EHGQLSISNGELVNERGEQVQLKGMSSHGLQWYG-----QFVNYESMKWLRDDWGINVFRAAMYTSS-------GGYIDD 72 (300)
T ss_dssp HHCSCEEETTEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHHHTCCCEEEEEEESST-------TSTTTC
T ss_pred cCCeEEEeCCEEECCCCCEEEEEEEeCCCccccc-----ccCCHHHHHHHHHHcCCCEEEEeeEcCc-------cCcccC
Confidence 3468999999999 59999999999987654321 112346676765 699999999765432 122468
Q ss_pred hhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 107 EQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 107 ~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+..++.||++|++|+++||+|||++|+.- |. .....++.+.++++.+++|
T Consensus 73 ~~~~~~ld~~v~~a~~~Gl~Vild~h~~~----~~---------------------~~~~~~~~~~~~w~~ia~r----- 122 (300)
T d7a3ha_ 73 PSVKEKVKEAVEAAIDLDIYVIIDWHILS----DN---------------------DPNIYKEEAKDFFDEMSEL----- 122 (300)
T ss_dssp TTHHHHHHHHHHHHHHHTCEEEEEEECSS----SC---------------------STTTTHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEeeeecC----CC---------------------CChhhHHHHHHHHHHHHHH-----
Confidence 89999999999999999999999998631 10 0112356778899999999
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA 266 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~ 266 (436)
||++|+|+ |+|+|||........+.+..++++++++||++||+++|.+++..+.... .+..
T Consensus 123 ---yk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~---------------~~~~ 183 (300)
T d7a3ha_ 123 ---YGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDV---------------HHAA 183 (300)
T ss_dssp ---HTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBH---------------HHHH
T ss_pred ---hCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCccccc---------------chhh
Confidence 99999985 9999999876544456799999999999999999999999875442211 0000
Q ss_pred -hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHH
Q 013811 267 -NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYY 345 (436)
Q Consensus 267 -~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~ 345 (436)
........++++|.|+.... .++.+.+..+.. .++||+|+|||.....+... ....+++.+++
T Consensus 184 ~~~~~~~niv~~~H~Y~~~~~-------------~~~~~~~~~~~~-~~~Pv~~gEfG~~~~~~~~~--~~~~~~~~~~~ 247 (300)
T d7a3ha_ 184 DNQLADPNVMYAFHFYAGTHG-------------QNLRDQVDYALD-QGAAIFVSEWGTSAATGDGG--VFLDEAQVWID 247 (300)
T ss_dssp TSCCSCTTEEEEEEEETTSCC-------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSC--CCHHHHHHHHH
T ss_pred cCCCCCCCEEEEECCccCcCc-------------ccHHHHHHHHHh-cCCCEEEeecCCccCCCCCC--cCHHHHHHHHH
Confidence 01112234789999975311 123333444444 79999999999875432111 11233344444
Q ss_pred HHHHHhhcCCCccceeecccccC
Q 013811 346 KIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 346 ~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+-+ ...||++|++.+.
T Consensus 248 ~~~~------~~igw~~W~~~~~ 264 (300)
T d7a3ha_ 248 FMDE------RNLSWANWSLTHK 264 (300)
T ss_dssp HHHH------TTCCEEEEEESCC
T ss_pred HHHH------cCCeEEEEeCcCC
Confidence 3222 3469999999754
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=99.97 E-value=5.8e-31 Score=252.94 Aligned_cols=253 Identities=15% Similarity=0.184 Sum_probs=177.5
Q ss_pred CCEEeeCCeEEE-CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhh
Q 013811 31 GFIRTRGSHFLL-NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQM 109 (436)
Q Consensus 31 ~fv~v~g~~f~~-nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~ 109 (436)
|| +|+|++|+. ||||++++|+|.... ......+++|+.||++|+|+||+++.. ++.|+++.
T Consensus 2 ~l-~v~G~~ivd~nG~~~~l~Gvn~~~~-------~~~~~~~~d~~~~~~~G~N~VRl~~~~----------~~~~~~~~ 63 (297)
T d1wkya2 2 GF-YVSGTTLYDANGNPFVMRGINHGHA-------WYKDQATTAIEGIANTGANTVRIVLSD----------GGQWTKDD 63 (297)
T ss_dssp CC-EEETTEEECTTSCBCCCEEEEECGG-------GCGGGHHHHHHHHHTTTCSEEEEEECC----------SSSSCCCC
T ss_pred ce-EEECCEEECCCCCEEEEEEeccCcc-------cCchHHHHHHHHHHHCCCcEEEEeccC----------CCccCccH
Confidence 44 899999996 999999999995221 122568899999999999999996542 23467778
Q ss_pred hhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~ 189 (436)
++.||++|++|.++||+|||++|..-. +......+.+.++++++++|
T Consensus 64 ~~~ld~~v~~a~~~Gi~vildlh~~~~-------------------------~~~~~~~~~~~~~w~~~a~~-------- 110 (297)
T d1wkya2 64 IQTVRNLISLAEDNNLVAVLEVHDATG-------------------------YDSIASLNRAVDYWIEMRSA-------- 110 (297)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTTT-------------------------CCCHHHHHHHHHHHHHTGGG--------
T ss_pred HHHHHHHHHHHHHCCCceEeecccccc-------------------------ccccccHHHHHHHHHHHHHH--------
Confidence 999999999999999999999985310 12344567788999999999
Q ss_pred cCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC
Q 013811 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269 (436)
Q Consensus 190 yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~ 269 (436)
|+++|+|++|+|+|||.... ..+.+..+++++++.||+.||+++|.++..++ +...... ...+.... ...
T Consensus 111 ~~~~p~v~~~~l~NEp~~~~--~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~-~~~~~~~------~~~~~~~~-~~~ 180 (297)
T d1wkya2 111 LIGKEDTVIINIANEWFGSW--DGAAWADGYKQAIPRLRNAGLNNTLMIDAAGW-GQFPQSI------HDYGREVF-NAD 180 (297)
T ss_dssp TTTCTTTEEEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTBTHHH------HHHHHHHH-HTC
T ss_pred hcCCCCEEEEeccccccccc--hhhhhhhhhhhhHHHHHhcCCCceEEEecCCc-ccccchh------hhcccccc-CCC
Confidence 99999999999999997654 35678899999999999999999999876443 1110000 00000010 112
Q ss_pred CCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 013811 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 270 ~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~ 349 (436)
.....++++|.|+..... ...+...++.+.+ .++||+|+|||.....+... .+. +++.+.+
T Consensus 181 ~~~~i~y~~H~Y~~~~~~-----------~~~~~~~~~~~~~-~g~Pv~vgEfG~~~~~~~~~---~~~----~~~~~~~ 241 (297)
T d1wkya2 181 PQRNTMFSIHMYEYAGGN-----------ASQVRTNIDRVLN-QDLALVIGEFGHRHTNGDVD---EST----IMSYSEQ 241 (297)
T ss_dssp TTCCEEEEEEESTTTSSS-----------HHHHHHHHHHHHT-TTCCEEEEEECSEETTEECC---HHH----HHHHHHH
T ss_pred cccceeEeeccccCCCCC-----------hhhHHHHHHHHhh-cCCCEEEEeecccCCCCcHH---HHH----HHHHHHH
Confidence 234458899999753221 1123334444554 79999999999876542211 222 2332222
Q ss_pred HhhcCCCccceeecccccCC
Q 013811 350 SAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 350 ~~~~~~~~~G~~~W~~~~~g 369 (436)
..+|+++|+|.+++
T Consensus 242 ------~~~gw~~W~~~~~~ 255 (297)
T d1wkya2 242 ------RGVGWLAWSWKGNG 255 (297)
T ss_dssp ------TTCEEEESCSSCCC
T ss_pred ------cCCeEEEEEEECCC
Confidence 24799999998764
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.97 E-value=2.6e-31 Score=256.16 Aligned_cols=257 Identities=14% Similarity=0.151 Sum_probs=175.2
Q ss_pred EEeeCCeEE-ECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhh
Q 013811 33 IRTRGSHFL-LNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFK 111 (436)
Q Consensus 33 v~v~g~~f~-~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~ 111 (436)
++|+|++|+ .|||||+++|+|.+.... ...+++|+.||++|+|+||++...+ ..+.+..++
T Consensus 4 l~v~g~~i~d~nG~~~~lrGvn~~~~~~--------~~~~~~~~~i~~~G~N~VRl~~~~~----------~~~~~~~~~ 65 (302)
T d1bqca_ 4 LHVKNGRLYEANGQEFIIRGVSHPHNWY--------PQHTQAFADIKSHGANTVRVVLSNG----------VRWSKNGPS 65 (302)
T ss_dssp SEEETTEEECTTSCBCCCEEEEECTTTC--------TTCTTHHHHHHHTTCSEEEEEECCS----------SSSCCCCHH
T ss_pred EEEeCCEEECCCCCEEEEEEeecCcccc--------cchHHHHHHHHhcCCCEEEEecccc----------cccCcchHH
Confidence 489999999 699999999999643221 1234579999999999999965422 235566789
Q ss_pred hHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccC
Q 013811 112 GLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191 (436)
Q Consensus 112 ~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk 191 (436)
.+|++|++|.++||+|||+||..+... ...++..++.+.+++++|++| |+
T Consensus 66 ~~~~~v~~a~~~Gi~vildlh~~~~~~----------------------~~~~~~~~~~~~~~w~~ia~~--------~~ 115 (302)
T d1bqca_ 66 DVANVISLCKQNRLICMLEVHDTTGYG----------------------EQSGASTLDQAVDYWIELKSV--------LQ 115 (302)
T ss_dssp HHHHHHHHHHHTTCEEEEEEGGGTTTT----------------------TSTTCCCHHHHHHHHHHTHHH--------HT
T ss_pred HHHHHHHHHHHCCCEEEEEeccccccc----------------------CCCchHHHHHHHHHHHHHHHH--------hc
Confidence 999999999999999999999753211 122344577889999999999 99
Q ss_pred CCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCC
Q 013811 192 DDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIP 271 (436)
Q Consensus 192 ~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~ 271 (436)
++|+|++|+|.|||........+.+..+++++++.||+.||+++|.++...+ ..... .+ .....+........
T Consensus 116 ~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~-~~~~~-----~~-~~~~~~~~~~~~~~ 188 (302)
T d1bqca_ 116 GEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNW-GQDWT-----NT-MRNNADQVYASDPT 188 (302)
T ss_dssp TCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTT-TTCTT-----CH-HHHHHHHHHHTCTT
T ss_pred CCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccc-cccch-----hh-hccchhccccCCcc
Confidence 9999999999999976543223467788899999999999999999986543 11100 00 00000111112223
Q ss_pred CcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 013811 272 GIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSA 351 (436)
Q Consensus 272 ~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~ 351 (436)
...++++|.|+.. .. ...+.++++...+ .++|++|+|||........ +++.+++.+.+
T Consensus 189 ~~~vy~~H~Y~~~-~~-----------~~~~~~~~~~~~~-~~~Pv~vgEfG~~~~~~~~-------~~~~~~~~~~~-- 246 (302)
T d1bqca_ 189 GNTVFSIHMYGVY-SQ-----------ASTITSYLEHFVN-AGLPLIIGEFGHDHSDGNP-------DEDTIMAEAER-- 246 (302)
T ss_dssp CCEEEEEEESGGG-CS-----------HHHHHHHHHHHHH-HTCCEEEEEECCTTSTTCC-------CHHHHHHHHHH--
T ss_pred cceEEEeeecCCC-CC-----------HHHHHHHHHHhhh-cCCcEEEEecCCcCCCCcH-------HHHHHHHHHHH--
Confidence 4568899999753 11 1123344444444 7999999999987543211 12223332222
Q ss_pred hcCCCccceeecccccCCC
Q 013811 352 KRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 352 ~~~~~~~G~~~W~~~~~g~ 370 (436)
...|+++|+|.+++.
T Consensus 247 ----~~~g~~~W~~~~~~~ 261 (302)
T d1bqca_ 247 ----LKLGYIGWSWSGNGG 261 (302)
T ss_dssp ----HTCEEEESCSSCCCT
T ss_pred ----cCCeEEEEEecCCCC
Confidence 246999999987653
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=99.97 E-value=7.5e-30 Score=250.48 Aligned_cols=268 Identities=18% Similarity=0.232 Sum_probs=182.9
Q ss_pred EEEeeccc-ccccccCCc---chhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCc--cCCCCCChhhhhhHHHHHHHHH
Q 013811 48 FANGFNAY-WLMYVASDP---SQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQ--RSPGSYNEQMFKGLDFVIAEAR 121 (436)
Q Consensus 48 ~~~G~N~~-~~~~~~~~~---~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq--~~pg~~~~~~l~~lD~~i~~a~ 121 (436)
+.+|+|.- |+....... .+....++||+.|+++|+|+||+++. |..++ +.++.++++.|+.||++|++|+
T Consensus 4 ~~rGvNlg~w~~~~~~~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~----~~~~~~~~~~~~~~~~~~~~ld~~v~~a~ 79 (340)
T d1ceoa_ 4 FKAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFD----YPIIESDDNVGEYKEDGLSYIDRCLEWCK 79 (340)
T ss_dssp CSEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEE----GGGTBCSSSTTCBCHHHHHHHHHHHHHHH
T ss_pred ccceeeechhhhcccccchhhhcccccHHHHHHHHHcCCCEEEeecC----HHHhccCCCCCccCHHHHHHHHHHHHHHH
Confidence 46899974 553322111 11223478999999999999999553 33344 3457789999999999999999
Q ss_pred HcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 122 KYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 122 ~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
++||+|||++|...... ... .....+++++..++.+.++++.|++| ||++|+|++|||
T Consensus 80 ~~gi~vild~H~~p~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~la~r--------y~~~p~v~~~el 137 (340)
T d1ceoa_ 80 KYNLGLVLDMHHAPGYR-----FQD---------FKTSTLFEDPNQQKRFVDIWRFLAKR--------YINEREHIAFEL 137 (340)
T ss_dssp HTTCEEEEEEEECCC----------------------CCTTTCHHHHHHHHHHHHHHHHH--------TTTCCSSEEEEC
T ss_pred HcCCEEEEEecCCCccc-----ccc---------cccccccccHHHHHHHHHHHHHHHHh--------cCCCCcEEEEee
Confidence 99999999998642110 000 01245788999999999999999999 999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecC
Q 013811 202 MNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSY 281 (436)
Q Consensus 202 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y 281 (436)
+|||... +.+.+.+|+++++++||+.||+|+|.+|+.++... .. + ..+ .....+++ ++++|.|
T Consensus 138 ~NEP~~~---~~~~~~~~~~~~~~aIR~~dp~~~I~v~g~~~~~~-~~--------~---~~~-~~~~d~nv-~~~~H~Y 200 (340)
T d1ceoa_ 138 LNQVVEP---DSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSP-DE--------L---KNL-ADIDDDYI-VYNFHFY 200 (340)
T ss_dssp CSCCCCS---SSHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHCG-GG--------G---GGS-CCCCCSSE-EEEEEEC
T ss_pred eeecCCC---CHHHHHHHHHHHHHHHHhcCCCcEEEeCCCCcCCc-hh--------h---hcC-CCCCCCCE-EEEEecc
Confidence 9999865 35789999999999999999999999987654221 10 0 000 01112333 7899999
Q ss_pred CC--------CCCCC--------------CChh-------------------HhHHHHHHHHHHHHHHHHHhcCCcEEEE
Q 013811 282 PD--------QWLSS--------------SNDR-------------------DQLSFLNNWLDTHIQDAEHILRKPILLA 320 (436)
Q Consensus 282 ~~--------~w~~~--------------~~~~-------------------~~~~~~~~~i~~~~~~a~~~~~kPv~i~ 320 (436)
.. .|... .... ....+....+....+.+.+ .++||+|+
T Consensus 201 ~p~~fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~Pv~ig 279 (340)
T d1ceoa_ 201 NPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREK-KKCKLYCG 279 (340)
T ss_dssp CSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHH-HCCEEEEE
T ss_pred CccccccccccccccccccccccCCCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH-cCCCEEEE
Confidence 42 12100 0000 0113334444444555555 79999999
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 321 EFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 321 EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
|||+.... +.+.|.+|++.+++.+.+ ..+|+++|+|.+.
T Consensus 280 EFG~~~~~---~~~~~~~~~~~~~~~~~~------~~igw~~W~~~~~ 318 (340)
T d1ceoa_ 280 EFGVIAIA---DLESRIKWHEDYISLLEE------YDIGGAVWNYKKM 318 (340)
T ss_dssp EECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCSBST
T ss_pred ccCCcCCC---CHHHHHHHHHHHHHHHHH------cCCcEEEeCCCCC
Confidence 99987543 456778888777664433 2469999998653
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-28 Score=236.77 Aligned_cols=283 Identities=17% Similarity=0.212 Sum_probs=189.5
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+|+|++|+|||||++++|+|.+..........+++.++++|+.||++|+|+||+|... .+
T Consensus 1 v~v~~~~f~lNG~~~~lrG~~~~~~~~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~~~~-------------~~------ 61 (304)
T d1bhga3 1 VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYP-------------YA------ 61 (304)
T ss_dssp EEECSSCEEETTEECCEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTTSC-------------CS------
T ss_pred CEEECCEEEECCEEEEEEeEEcCCCCCccCCCCCHHHHHHHHHHHHHcCCCEEEecCCC-------------Ch------
Confidence 78999999999999999999976443322222356899999999999999999997532 11
Q ss_pred HHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 113 LDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
+.++++|.++||.|+.++...+.. ...+.++...+.+++.++++|+| +++
T Consensus 62 -~~~~~~cD~~Gilv~~e~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~i~~--------~rn 111 (304)
T d1bhga3 62 -EEVMQMCDRYGIVVIDECPGVGLA---------------------LPQFFNNVSLHHHMQVMEEVVRR--------DKN 111 (304)
T ss_dssp -STHHHHHSTTCCEEEECCSCCCTT---------------------SSGGGSHHHHHHHHHHHHHHHHH--------HTT
T ss_pred -HHHHHHHHhcCCeeeecccccccc---------------------cccccchHHHHHHHHHHHHHHHH--------hcC
Confidence 247889999999999988653211 11245688889999999999999 999
Q ss_pred CCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCC
Q 013811 193 DPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPG 272 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~ 272 (436)
||+|++|+++|||... ......|.+++++.||++||+|+|+.++...... ....+.
T Consensus 112 hPsI~~w~~~NE~~~~----~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~~--------------------~~~~~~ 167 (304)
T d1bhga3 112 HPAVVMWSVANEPASH----LESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAA--------------------DKGAPY 167 (304)
T ss_dssp CSSEEEEEEEESCCTT----SHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTTT--------------------CSSGGG
T ss_pred CCcHHHhccCCCCCcc----cchhhhhhHHHHHHHHhhCCCCceeeeccccccc--------------------cccccc
Confidence 9999999999999874 3456788999999999999999999875321100 011245
Q ss_pred cceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC-------CCChHHHHHHHHHHHH
Q 013811 273 IDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP-------GYSTYQRDVMFNTVYY 345 (436)
Q Consensus 273 iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~-------g~~~~~r~~~~~~~~~ 345 (436)
.|+++.|.|..........+.. ...+......... ..+||++++|+|...... ..+++.+..++.....
T Consensus 168 ~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 243 (304)
T d1bhga3 168 VDVICLNSYYSWYHDYGHLELI---QLQLATQFENWYK-KYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHL 243 (304)
T ss_dssp CSSEEEECCTTSSSSTTCHHHH---HHHHHHHHHHHHH-HSCSCEEEEECCCCCCTTCCCSSCCSSCHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhh---hhhhhHHHHHhhc-cCCCCeEEecchhhcccccCCCcccccCHHHHHHHHHHHHH
Confidence 7888999997643322222111 1111111111222 379999999999875421 1355555555554443
Q ss_pred HHHHHhhcCCCccceeecccccCCC-----CCCCCCceEEeCCC--cCHHHHHHHH
Q 013811 346 KIYSSAKRGGAAAGGLFWQLLTEGM-----DAFRDGYEIVLSQS--PSTANVITQQ 394 (436)
Q Consensus 346 ~i~~~~~~~~~~~G~~~W~~~~~g~-----~~~~dg~~i~~~~d--~~~~~li~~~ 394 (436)
.+.. .+ .+.++|.++|++.|... ..+...++|+..+. +....++++.
T Consensus 244 ~~~~-~~-~~~~~G~~~w~~~D~~~~~~~~~~~~~~~Gl~d~~~~PK~a~~~~k~~ 297 (304)
T d1bhga3 244 GLDQ-KR-RKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRER 297 (304)
T ss_dssp HHHH-HT-TTTEEEEEEEESBCBCCCCBTTBSSSBCCCSBCTTSCBCHHHHHHHHH
T ss_pred HHHH-hC-CCCeEEEEEeeeEecCCCCCCCCCCccccccCCCCCCCCHHHHHHHHH
Confidence 3322 22 24688999999998432 11223456766432 2344445443
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=99.95 E-value=4.5e-28 Score=239.21 Aligned_cols=268 Identities=15% Similarity=0.171 Sum_probs=172.3
Q ss_pred CCCCCEEeeCCeEEE--CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHH-CCCCEEEEccccCCCCCCCccCCCC
Q 013811 28 AGDGFIRTRGSHFLL--NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAAS-HGLTVARTWAFSDGGYRPLQRSPGS 104 (436)
Q Consensus 28 ~~~~fv~v~g~~f~~--nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~N~vRi~~~~d~~~~~lq~~pg~ 104 (436)
++..+|+|+|+++++ +|+|++++|+|.++..... + ..-+++++.|++ +|+|+||+.+.. ++.+..
T Consensus 14 ~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~-~----~~~~~~~~~l~~~~G~N~VRlp~~~-------~~~~~~ 81 (357)
T d1g01a_ 14 GALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFG-E----IVNENAFVALSNDWGSNMIRLAMYI-------GENGYA 81 (357)
T ss_dssp CSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHG-G----GCSHHHHHHHHTTSCCSEEEEEEES-------SSSSTT
T ss_pred cCCCeEEEcCeEEEECCCCCEEEEEEEecCcchhcc-c----ccCHHHHHHHHHhcCCCEEEEeeee-------cCCCCc
Confidence 456789999998776 6999999999987665432 1 223577888875 899999996532 234456
Q ss_pred CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccc
Q 013811 105 YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNT 184 (436)
Q Consensus 105 ~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~ 184 (436)
++++.++.||.+|++|.++||+|||++|..- ++. .++...+.+.++++.|++|
T Consensus 82 ~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~---~~~---------------------~~~~~~~~~~~~W~~iA~r--- 134 (357)
T d1g01a_ 82 TNPEVKDLVYEGIELAFEHDMYVIVDWHVHA---PGD---------------------PRADVYSGAYDFFEEIADH--- 134 (357)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCEEEEEEECCS---SSC---------------------TTSGGGTTHHHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEeecccC---CCC---------------------CChhhhhhhHHHHHHHHHH---
Confidence 7889999999999999999999999998641 110 0112233456789999999
Q ss_pred ccccccCCCCc--EEEEEeecCCCCCCCC------C---hHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCcccc
Q 013811 185 FTGIHYKDDPT--IMAWELMNEPRCTSDP------S---GRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKR 253 (436)
Q Consensus 185 ~tg~~yk~~p~--I~~weL~NEp~~~~~~------~---~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~ 253 (436)
|+++|+ +++|||+|||...... . ...+..+++++++.||+.+++++|. +...+... .
T Consensus 135 -----y~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv-~~~~w~~~-~----- 202 (357)
T d1g01a_ 135 -----YKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILV-GNPNWSQR-P----- 202 (357)
T ss_dssp -----HTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCHHHHTC-H-----
T ss_pred -----HhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCceEEE-ecCCcccc-c-----
Confidence 999985 6789999999876432 1 2467778899999999998776554 43232111 0
Q ss_pred CCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCC-----CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCC
Q 013811 254 VNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSS-----SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR 326 (436)
Q Consensus 254 ~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~-----~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~ 326 (436)
.+... ...+++ ++++|.|+...... ..... .....+....+.+.+ .++||+|+|||...
T Consensus 203 ---------~~~~~~~~~~~nv-vys~H~Y~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~g~Pv~vgEfG~~~ 268 (357)
T d1g01a_ 203 ---------DLSADNPIDAENI-MYSVHFYTGSHGASHIGYPEGTPS---SERSNVMANVRYALD-NGVAVFATEWGTSQ 268 (357)
T ss_dssp ---------HHHHHSCCSSSSE-EEEEEEETTTSCCCCCCCCTTCCG---GGCCCHHHHHHHHHH-TTCCEEEEEEESSB
T ss_pred ---------hhcccccCCCCCE-EEEEEEecCccCCccCCCCcccch---HHHHHHHHHHHHHHH-cCCCEEEEecCCcC
Confidence 11111 112333 78999997532211 11000 111223344444554 78999999999876
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 327 KDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 327 ~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
....... ...+.+.+++.+ + + ...||.+|++.+.
T Consensus 269 ~~~~~~~--~~~~~~~~~~~~-~---~--~~isw~~W~~~~~ 302 (357)
T d1g01a_ 269 ANGDGGP--YFDEADVWLNFL-N---K--HNISWANWSLTNK 302 (357)
T ss_dssp TTTBSCC--CHHHHHHHHHHH-H---H--TTCCEEEEEECCS
T ss_pred CCCCCCc--CHHHHHHHHHHH-H---H--cCCceEEEeCcCC
Confidence 4321110 112233333322 2 1 3579999999874
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=99.95 E-value=6.8e-27 Score=225.97 Aligned_cols=266 Identities=12% Similarity=0.112 Sum_probs=170.8
Q ss_pred eEEEEEeeccccccccc-CCcc--hhh---hHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHH
Q 013811 45 NLYFANGFNAYWLMYVA-SDPS--QRS---KVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFV 116 (436)
Q Consensus 45 kp~~~~G~N~~~~~~~~-~~~~--~~~---~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~ 116 (436)
|+|.++|+|..-..+.. .-|. ..+ .-+++|+.|+++|+|+||+.+. |..+++ .++.++++.++.||++
T Consensus 2 ~~~~~~Gvn~~G~e~~~~~~~g~~~~~~~~~t~~di~~l~~~G~N~VRlPv~----~~~~~~~~~~~~~~~~~~~~l~~~ 77 (305)
T d1h1na_ 2 KVFQWFGSNESGAEFGSQNLPGVEGKDYIWPDPNTIDTLISKGMNIFRVPFM----MERLVPNSMTGSPDPNYLADLIAT 77 (305)
T ss_dssp CSSSEEEEEECCTTCSTTSSSCCBTTTBCCCCHHHHHHHHHTTCCEEEEEEC----HHHHSCSSTTSCCCHHHHHHHHHH
T ss_pred CceeEEEEEccccccCCCCCCCccCCCcccCCHHHHHHHHHCCCCEEEeeee----HHHhccCCCCCccCHHHHHHHHHH
Confidence 68899999953221111 1111 111 1378999999999999999642 333443 2467899999999999
Q ss_pred HHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcE
Q 013811 117 IAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196 (436)
Q Consensus 117 i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I 196 (436)
|+.|.++||+|||++|+....++ ....+ .+.|.+++++|++| |+++|.|
T Consensus 78 v~~a~~~gl~vIlD~H~~~~~~~--------------------~~~~~---~~~~~~~W~~ia~~--------~~~~~~v 126 (305)
T d1h1na_ 78 VNAITQKGAYAVVDPHNYGRYYN--------------------SIISS---PSDFETFWKTVASQ--------FASNPLV 126 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTEETT--------------------EECCC---HHHHHHHHHHHHHT--------STTCTTE
T ss_pred HHHHHhcCCeEEEecccCCcccc--------------------ccccc---HHHHHHHHHHHHHH--------hCCCCee
Confidence 99999999999999997521110 01112 35688899999999 9999988
Q ss_pred EEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccC-CCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcce
Q 013811 197 MAWELMNEPRCTSDPSGRTIQAWITEMASYVKSID-RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDF 275 (436)
Q Consensus 197 ~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D-p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~ 275 (436)
+|||+|||... +.+.+.++.+++.++||+.| |+++|.+++.++...... . .....+.......+--+
T Consensus 127 -~~el~NEP~~~---~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~v 194 (305)
T d1h1na_ 127 -IFDTDNEYHDM---DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTW--T------NVNDNMKSLTDPSDKII 194 (305)
T ss_dssp -EEECCSCCCSS---CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTH--H------HHSGGGGGCCCTTCCEE
T ss_pred -EEEeccCCCCc---cHHHHHHHHHHHHHHHHhcCCCCCEEEECCCcccccccc--c------ccCcccccCCCCCCCEE
Confidence 59999999753 46789999999999999998 578888887654221100 0 00001111111112347
Q ss_pred EEeecCCCCCCCCCChh-HhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcC
Q 013811 276 ATVHSYPDQWLSSSNDR-DQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRG 354 (436)
Q Consensus 276 ~s~H~Y~~~w~~~~~~~-~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~ 354 (436)
+++|.|.+...+..... ........++....+.+++ .++|++|||||.... .....+++.+.+.+.+. +
T Consensus 195 ~s~H~Y~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~g~p~~igEfG~~~~------~~~~~~~~~~~~~~~~~---~ 264 (305)
T d1h1na_ 195 YEMHQYLDSDGSGTSATCVSSTIGQERITSATQWLRA-NGKKGIIGEFAGGAD------NVCETAITGMLDYMAQN---T 264 (305)
T ss_dssp EEEEEECSTTSSSCCSCCSCTTHHHHHHHHHHHHHHH-TTCCEEEEEEECCSS------HHHHHHHHHHHHHHHTC---T
T ss_pred EEEEeCCCCCCCCccccccccchHHHHHHHHHHHHHH-cCCcEEEEcCCCCCC------CcHHHHHHHHHHHHHHc---C
Confidence 89999975432211100 0012233445555555555 799999999997643 23446666665544322 2
Q ss_pred CCccceeeccccc
Q 013811 355 GAAAGGLFWQLLT 367 (436)
Q Consensus 355 ~~~~G~~~W~~~~ 367 (436)
...+|+++|+.++
T Consensus 265 ~~~~gw~~W~~g~ 277 (305)
T d1h1na_ 265 DVWTGAIWWAAGP 277 (305)
T ss_dssp TTEEEEEEEEECT
T ss_pred CcceEEEEecCCC
Confidence 3458999999866
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=5.2e-26 Score=220.38 Aligned_cols=260 Identities=18% Similarity=0.230 Sum_probs=173.4
Q ss_pred EEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc--CCCCCChhhhhhHHHHHHHHHHcCC
Q 013811 48 FANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR--SPGSYNEQMFKGLDFVIAEARKYGI 125 (436)
Q Consensus 48 ~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~--~pg~~~~~~l~~lD~~i~~a~~~Gi 125 (436)
+++|+|........ .+....++||+.|+++|+|+||+++. |..+++ .|+.++++.|++||++|++|.++||
T Consensus 3 ~~~G~n~~~~~~~~---~~~~~~e~d~~~l~~~G~n~vRlpv~----~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi 75 (325)
T d1vjza_ 3 RWRGFNLLEAFSIK---STGNFKEEDFLWMAQWDFNFVRIPMC----HLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGI 75 (325)
T ss_dssp CCEEEECCTTSSTT---CCCCCCHHHHHHHHHTTCCEEEEEEE----GGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTC
T ss_pred cccceehhhhhhhc---ccCCCCHHHHHHHHHcCCCEEEeccc----HHHccCCCCCCccCHHHHHHHHHHHHHHHHcCC
Confidence 35799964332221 12356789999999999999999653 334454 3567889999999999999999999
Q ss_pred EEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecC
Q 013811 126 KLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNE 204 (436)
Q Consensus 126 ~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NE 204 (436)
+|||++|... |... +........++.++..++.+..+++.|++| |+++ +.|++|+|+||
T Consensus 76 ~vildlH~~p----g~~~--------~~~~~~~~~~~~~~~~~~~~~~~w~~~a~~--------~~~~~~~i~~~el~NE 135 (325)
T d1vjza_ 76 HICISLHRAP----GYSV--------NKEVEEKTNLWKDETAQEAFIHHWSFIARR--------YKGISSTHLSFNLINE 135 (325)
T ss_dssp EEEEEEEEET----TEES--------CTTSCCSSCTTTCHHHHHHHHHHHHHHHHH--------HTTSCTTTEEEECSSC
T ss_pred cEEEeecccc----cccc--------CcccccccccccchhhHHHHHHHHHHHHHH--------hcccceeEEeeecccc
Confidence 9999999642 1100 000113356678889999999999999999 9986 56899999999
Q ss_pred CCCCCC--CChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCC
Q 013811 205 PRCTSD--PSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYP 282 (436)
Q Consensus 205 p~~~~~--~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~ 282 (436)
|..... ...+.+..++++++++||+.||+++|.+|+.++.+...+ + ...+. ..+++|.|.
T Consensus 136 P~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v~v~g~~~~~~~~~------~-----------~~~~~-~~~~~~~y~ 197 (325)
T d1vjza_ 136 PPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPVD------D-----------LTIEN-TVQSCRGYI 197 (325)
T ss_dssp CCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHHHTBCCT------T-----------CCCSS-EEEEEEECC
T ss_pred CCCCccccchhhhhhhHHHHHHHHHhccCCCcEEEecCCccccccCC------c-----------ccccc-eeeeecccc
Confidence 986532 245678899999999999999999999987654322111 0 00111 234555542
Q ss_pred --------CCCCCCC-----------------ChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHH
Q 013811 283 --------DQWLSSS-----------------NDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRD 337 (436)
Q Consensus 283 --------~~w~~~~-----------------~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~ 337 (436)
..|.... ........+..|+. ..+ .++||+|||||.... .+.+.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~g~Pv~~gEfG~~~~---~~~~~~~ 268 (325)
T d1vjza_ 198 PFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIK-----LRQ-KGIEVFCGEMGAYNK---TPHDVVL 268 (325)
T ss_dssp SHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHG-----GGG-GTCEEEEEEECCCTT---SCHHHHH
T ss_pred cccccccccccccccccccCCCCccccccccccHHHHHHHHHHHHH-----HHh-cCCCEEEeeccCcCC---CCcHHHH
Confidence 1111100 00111222222221 112 589999999998644 2556677
Q ss_pred HHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 338 VMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 338 ~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.|++.+++.+.+ ...|+++|++..
T Consensus 269 ~~~~~~l~~~~~------~g~g~~~W~~~~ 292 (325)
T d1vjza_ 269 KWLEDLLEIFKT------LNIGFALWNFRG 292 (325)
T ss_dssp HHHHHHHHHHHH------TTCEEEESCSBS
T ss_pred HHHHHHHHHHHH------cCCeEEEEcCCC
Confidence 788877765433 246999999975
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.91 E-value=1.1e-23 Score=202.17 Aligned_cols=246 Identities=18% Similarity=0.204 Sum_probs=162.6
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+|+|++|+|||||++++|+|.|........+.+.+.++++|+.||++|+|+||++... .+
T Consensus 1 i~v~g~~f~LNGk~~~l~Gv~~h~~~p~~G~a~~~~~~~~di~l~k~~G~N~iR~~h~p-------------~~------ 61 (297)
T d1yq2a5 1 VRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYP-------------PH------ 61 (297)
T ss_dssp EEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTSC-------------CC------
T ss_pred CEEECCEEEECCEEEEEeeeEcCCcCcccCcCCCHHHHHHHHHHHHHCCCCEEEccCCC-------------Ch------
Confidence 78999999999999999999976332222223356889999999999999999996532 12
Q ss_pred HHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 113 LDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
+.+++.|.+.||.|+..+...+.... .. + .......++...+.+++.++++|.| ++|
T Consensus 62 -~~~~d~cD~~Gilv~~e~~~~~~~~~----~~------~----~~~~~~~~~~~~~~~~~~~~emV~r--------~~N 118 (297)
T d1yq2a5 62 -PRLLDLADEMGFWVILECDLETHGFE----AG------G----WVENPSDVPAWRDALVDRMERTVER--------DKN 118 (297)
T ss_dssp -HHHHHHHHHHTCEEEEECSCBCGGGT----TT------T----TTTCGGGCGGGHHHHHHHHHHHHHH--------HTT
T ss_pred -HHHHHHHHhcCCEEEEeecccccccc----cc------C----ccCCccccHHHHHHHHHHHHHHHHH--------hCC
Confidence 37889999999999999865432110 00 0 1122345677889999999999999 999
Q ss_pred CCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCC
Q 013811 193 DPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPG 272 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~ 272 (436)
||+|++|.++||+... .+++++.+.+|++||+++|+.++... +.... . ... .....+.
T Consensus 119 HPSIi~W~~gNE~~~~---------~~~~~~~~~~k~~D~tRp~~~~~~~~-~~~~~--------~--~~~--~~~~~~~ 176 (297)
T d1yq2a5 119 HPSIVMWSLGNESGTG---------SNLAAMAAWAHARDSSRPVHYEGDYT-GAYTD--------V--YSR--MYSSIPE 176 (297)
T ss_dssp CTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECTTCTT-CSSCS--------S--EEE--ESCCHHH
T ss_pred CCceEeecccccCCch---------HHHHHHHHHHHHhccCCcccccCccC-Cccce--------e--ecc--ccCChhh
Confidence 9999999999998753 34678899999999999998765321 11000 0 000 0112244
Q ss_pred cceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 013811 273 IDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAK 352 (436)
Q Consensus 273 iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~ 352 (436)
+|+++.+.|....... .. ..... ..+||++++||+........ ....+.+ .+..
T Consensus 177 ~d~~~~~~~~~~~~~~-~~--------------~~~~~-~~~kp~~~~e~~~~~~~~~~---~~~~~~~----~~~~--- 230 (297)
T d1yq2a5 177 TDSIGRNDSHALLLGC-DS--------------AESAR-QRTKPFILCEYVHAMGNGPG---AMDQYEA----LVDK--- 230 (297)
T ss_dssp HHHHHCSSCCCCCTTC-CH--------------HHHHH-HTTSCEEEEEESCCCSSCCC---CHHHHHH----HHHH---
T ss_pred hhhhhhcccccchhcc-ch--------------hhhcc-cCCCCcceecccccccCCcc---cHHHHHH----HHhh---
Confidence 5655555554321111 00 01112 27999999999976543221 1222222 2212
Q ss_pred cCCCccceeecccccCC
Q 013811 353 RGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 353 ~~~~~~G~~~W~~~~~g 369 (436)
...++|.+.|++.|.+
T Consensus 231 -~~~~~G~~vW~~~D~~ 246 (297)
T d1yq2a5 231 -YPRLHGGFVWEWRDHG 246 (297)
T ss_dssp -CTTEEEEEESCSBCCC
T ss_pred -CCCcccceEeeeeeeh
Confidence 2468999999999864
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=99.91 E-value=9.2e-23 Score=202.54 Aligned_cols=264 Identities=14% Similarity=0.125 Sum_probs=164.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCC-CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRP-LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~-lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
...+++|+.||++|+|+|||++. |.. +.+.|+.++++.|++||++|+.|.++||+|||++|+.-. ...
T Consensus 61 ~~t~~~i~~ik~~Gfn~vRiPv~----w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~---~~~---- 129 (380)
T d1edga_ 61 KTTKQMIDAIKQKGFNTVRIPVS----WHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVD---KVK---- 129 (380)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCC----CGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBC---TTT----
T ss_pred cccHHHHHHHHHcCCCEEEEccc----HHHhcCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEecccCCC---CCc----
Confidence 34578999999999999999653 433 344677889999999999999999999999999996411 100
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC--------C------
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--------S------ 212 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--------~------ 212 (436)
+ .....+..+..++.|.+++++|++| ||++|.+++|||+|||...... .
T Consensus 130 -----~----~~~~~~~~~~~~~~~~~~W~qiA~~--------fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~ 192 (380)
T d1edga_ 130 -----G----YFPSSQYMASSKKYITSVWAQIAAR--------FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDS 192 (380)
T ss_dssp -----S----BCSSGGGHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHH
T ss_pred -----c----cCCcccCcHHHHHHHHHHHHHHHHh--------hcCCCceEEEeecccccccCCccccccccccccHHHH
Confidence 0 0112244567889999999999999 9999999999999999875431 0
Q ss_pred hHHHHHHHHHHHHHhhccC---CCCEEEeCCCcccCCCCC-ccccCCCCCcccchhhhhcCCCCcceEEeecCCCC----
Q 013811 213 GRTIQAWITEMASYVKSID---RNHLLEAGLEGFYGQSTP-QRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQ---- 284 (436)
Q Consensus 213 ~~~~~~w~~~~~~~Ir~~D---p~~lV~vG~~g~~~~~~~-~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~---- 284 (436)
.+.+.++.+.+...||+.+ |+++|.++...+ +.... ......|. +. ....+.-++++|+|...
T Consensus 193 ~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~-~~~~~~~~~~~~p~-----d~---~~~~~~li~s~H~Y~p~~f~~ 263 (380)
T d1edga_ 193 INCINQLNQDFVNTVRATGGKNASRYLMCPGYVA-SPDGATNDYFRMPN-----DI---SGNNNKIIVSVHAYCPWNFAG 263 (380)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CHHHHHSTTCCCCC-----CC---TTCCSCEEEEEECCCSHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEeCCCcc-CCccccchhhcccc-----cc---cCCCCCEEEEEeecCcccccc
Confidence 1346677788889999875 667777654221 10000 00000010 00 00122337899999631
Q ss_pred -----CCC---CCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCC
Q 013811 285 -----WLS---SSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGA 356 (436)
Q Consensus 285 -----w~~---~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~ 356 (436)
+.. ..............+....+...+ .+.||+|||||+.... ..+.|..|++.+.....+ .
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~giPviiGEfG~~~~~---~~~~r~~~~~~~~~~a~~------~ 333 (380)
T d1edga_ 264 LAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTS-RGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAKA------R 333 (380)
T ss_dssp SCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHH------T
T ss_pred ccCCcCCCCccccCccccHHHHHHHHHHHHHHHHh-cCceEEEecccCcCCC---ChHHHHHHHHHHHHHHHH------c
Confidence 000 001111111122222222222333 6899999999997653 456777888776654322 2
Q ss_pred ccceeecccccCCCCCCCCCceEE
Q 013811 357 AAGGLFWQLLTEGMDAFRDGYEIV 380 (436)
Q Consensus 357 ~~G~~~W~~~~~g~~~~~dg~~i~ 380 (436)
..++++|.....+. .++.|+++
T Consensus 334 gi~~~~Wdn~~~~~--~~~~fg~~ 355 (380)
T d1edga_ 334 GILCILWDNNNFSG--TGELFGFF 355 (380)
T ss_dssp TCEEEECCCCCCSS--SSCCCCCE
T ss_pred CCcEEEECCCCCCC--CccCccee
Confidence 45899997654321 12446654
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=99.89 E-value=4.3e-22 Score=198.67 Aligned_cols=257 Identities=18% Similarity=0.197 Sum_probs=164.8
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCC-CCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPG-SYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWAR 149 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg-~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~ 149 (436)
++||+.||++|+|+|||++. |..+++.++ .|.+..++.||++|+.|+++||+|||+||.......+.+
T Consensus 71 ~~D~~~i~~~G~N~VRiPv~----~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~------- 139 (394)
T d2pb1a1 71 EQDFKQISNLGLNFVRIPIG----YWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFD------- 139 (394)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCG-------
T ss_pred HHHHHHHHHCCCCEEEEEec----HHHhcCCCCCccchhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcC-------
Confidence 67899999999999999653 223343333 377788999999999999999999999997532211110
Q ss_pred hcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC---cEEEEEeecCCCCCCCCChHHHHHHHHHHHHH
Q 013811 150 SQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP---TIMAWELMNEPRCTSDPSGRTIQAWITEMASY 226 (436)
Q Consensus 150 ~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p---~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~ 226 (436)
..|. ....+|+++..++.+.++++.|++| |+++| +|++|||.|||..... ..+.+.+|+++++++
T Consensus 140 ~~g~---~~~~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~~~~v~g~el~NEP~~~~~-~~~~~~~~~~~~~~~ 207 (394)
T d2pb1a1 140 NSGL---RDSYNFQNGDNTQVTLNVLNTIFKK--------YGGNEYSDVVIGIELLNEPLGPVL-NMDKLKQFFLDGYNS 207 (394)
T ss_dssp GGSS---TTCCCTTSTTHHHHHHHHHHHHHHH--------HSSGGGTTTEEEEESCSCCCGGGS-CHHHHHHHHHHHHHH
T ss_pred CcCc---cCccccccHHHHHHHHHHHHHHHHH--------HccCCCCCceEEEeecccCCcccc-cHHHHHHHHHHHHHH
Confidence 0121 2245678888999999999999999 99886 6999999999976432 356899999999999
Q ss_pred hhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCC---CChhHhHHHHHHHHH
Q 013811 227 VKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSS---SNDRDQLSFLNNWLD 303 (436)
Q Consensus 227 Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~~~~~i~ 303 (436)
||+.||+++|.++. ++++...- . ++..........++++|.|.. |... .+....+.....+
T Consensus 208 IR~~~~~~~I~i~~-~~~~~~~~-----~-------~~~~~~~~~~~vv~d~H~Y~~-f~~~~~~~~~~~~i~~~~~~-- 271 (394)
T d2pb1a1 208 LRQTGSVTPVIIHD-AFQVFGYW-----N-------NFLTVAEGQWNVVVDHHHYQV-FSGGELSRNINDHISVACNW-- 271 (394)
T ss_dssp HHHTTCCCCEEEEC-TTCCTTTT-----T-------TSSCGGGTCCSEEEEEECCSC-SSHHHHTCCHHHHHHHHHHH--
T ss_pred HHHhCCCCeEEEcC-CCcchhhh-----h-------hhccCCCCCceEEEeeecccc-cCCccccCCHHHHHHhhhhh--
Confidence 99999999999875 44322110 0 111111112335789999974 3211 1111111111111
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCC---------------------------------CCCChHHHHHHHHHHHHHHHHH
Q 013811 304 THIQDAEHILRKPILLAEFGKSRKD---------------------------------PGYSTYQRDVMFNTVYYKIYSS 350 (436)
Q Consensus 304 ~~~~~a~~~~~kPv~i~EfG~~~~~---------------------------------~g~~~~~r~~~~~~~~~~i~~~ 350 (436)
.....+ ...|++++|+...... ..++ +.+.+.+++.++...+.
T Consensus 272 --~~~~~~-~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~~~d~~~~~-~~~~~~~r~~~~aQ~~~ 347 (394)
T d2pb1a1 272 --GWDAKK-ESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWS-DEHKTDTRRYIEAQLDA 347 (394)
T ss_dssp --HHHHHT-CSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCC-HHHHHHHHHHHHHHHHH
T ss_pred --hhhhhc-ccCcceeceecccchhhhhhhcccccccccccccCCCccccccccccChhhcC-HHHHHHHHHHHHHHHHH
Confidence 112222 4678888887653321 1112 23345566666655555
Q ss_pred hhcCCCccceeecccccCCCCCC
Q 013811 351 AKRGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 351 ~~~~~~~~G~~~W~~~~~g~~~~ 373 (436)
... ..||+||+|..+..+.|
T Consensus 348 ~e~---~~GW~fWt~K~~~~~~W 367 (394)
T d2pb1a1 348 FEY---TGGWVFWSWKTENAPEW 367 (394)
T ss_dssp HHT---TTEEEESCSCCSSCGGG
T ss_pred Hhc---CCcEEEeccccCCCCCC
Confidence 432 36999999986544456
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.89 E-value=3.2e-23 Score=204.01 Aligned_cols=191 Identities=10% Similarity=0.082 Sum_probs=140.7
Q ss_pred CCEEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhh
Q 013811 31 GFIRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMF 110 (436)
Q Consensus 31 ~fv~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l 110 (436)
.||+.++..|++||||+++.|.+.|+.... .++.++++|+.||++|+|+||++++ |...+|++|.||-+.+
T Consensus 4 ~~v~~d~~~~~~~G~~~~~~~~~~h~~r~~-----~~~~w~~~l~~mk~~G~n~vr~~~~----W~~~ep~~g~~df~~~ 74 (354)
T d1tg7a5 4 KYVTWDEHSIFVNGERLMIFSGEVHPYRLP-----VASLYIDIFEKVKALGFNCVSFYVD----WALLEGNPGHYSAEGI 74 (354)
T ss_dssp SSEEECSSCEEETTEEECEEEEECCGGGSC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCCCGG
T ss_pred ceEEEeCCEEEECCEEEEEEEEecCCCCCC-----CHHHHHHHHHHHHHcCCCEEEEecc----hhccCCCCCcccccch
Confidence 489999999999999999999998765321 2367999999999999999999876 6678999999999889
Q ss_pred hhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccccc
Q 013811 111 KGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHY 190 (436)
Q Consensus 111 ~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~y 190 (436)
..||++|++|+++||+||+.+...+........++.|..... .....++|...++.+++++++++++... .|
T Consensus 75 ~~l~~~l~~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~-----~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~ 146 (354)
T d1tg7a5 75 FDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVD-----GILRTSDEAYLKATDNYASNIAATIAKA---QI 146 (354)
T ss_dssp GCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCS-----SCTTSSCHHHHHHHHHHHHHHHHHHHHT---BG
T ss_pred hhHHHHHHHHHHcCCEEEEcCCCCcCcccccCCCCcccccCC-----CcccCCCHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 999999999999999999998654322112234566654321 1223467888888888888888874333 38
Q ss_pred CCCCcEEEEEeecCCCCCCCC-ChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 191 KDDPTIMAWELMNEPRCTSDP-SGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 191 k~~p~I~~weL~NEp~~~~~~-~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
+|+|+|++|+|.||....... .+....++++.+.+..++.+...++..
T Consensus 147 ~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 195 (354)
T d1tg7a5 147 TNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFIS 195 (354)
T ss_dssp GGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred ccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcccceEe
Confidence 999999999999999764321 111223344444555555666655543
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=8.5e-21 Score=181.08 Aligned_cols=155 Identities=14% Similarity=0.212 Sum_probs=122.7
Q ss_pred EEeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhh
Q 013811 33 IRTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKG 112 (436)
Q Consensus 33 v~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~ 112 (436)
|+++|++|+|||||++++|+|.+..........+.+.++++|+.||++|+|+||++.... +
T Consensus 2 v~i~~~~f~lNGk~~~l~G~~~~~~~~~~g~~~~~~~~~~di~l~k~~G~N~iR~~~~p~-------------~------ 62 (292)
T d1jz8a5 2 VRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPN-------------H------ 62 (292)
T ss_dssp EEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCC-------------C------
T ss_pred EEEECCEEEECCEEEEEeeeEccCCCCccCCCCCHHHHHHHHHHHHhcCCCEEEecCCCC-------------h------
Confidence 789999999999999999999764433322234568899999999999999999965421 2
Q ss_pred HHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC
Q 013811 113 LDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD 192 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~ 192 (436)
+.+++.|.++||.|+..+...|.... .......+|...+.+.+.++++|.| +++
T Consensus 63 -~~~~~~~D~~Gilv~~e~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~v~r--------~~n 116 (292)
T d1jz8a5 63 -PLWYTLCDRYGLYVVDEANIETHGMV-----------------PMNRLTDDPRWLPAMSERVTRMVQR--------DRN 116 (292)
T ss_dssp -HHHHHHHHHHTCEEEEECSCBCTTSS-----------------STTTTTTCGGGHHHHHHHHHHHHHH--------HTT
T ss_pred -HHHHHHHhhcCCeEEeeeeecccCCc-----------------ccCCCCCCHHHHHHHHHHHHHHHHH--------ccC
Confidence 36889999999999999865432110 1122345788899999999999999 999
Q ss_pred CCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCC
Q 013811 193 DPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLE 241 (436)
Q Consensus 193 ~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~ 241 (436)
||+|++|.+.||+... .....+.+.||++||+++++.+..
T Consensus 117 HPSvi~W~~~NE~~~~---------~~~~~~~~~~~~~d~~r~~~~~~~ 156 (292)
T d1jz8a5 117 HPSVIIWSLGNESGHG---------ANHDALYRWIKSVDPSRPVQYEGG 156 (292)
T ss_dssp CTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECCTT
T ss_pred CCcHHHhcccccCCcc---------hhhHHHHHHHHHHhhcCccccccc
Confidence 9999999999999863 234667788999999999998764
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=1.8e-20 Score=187.42 Aligned_cols=258 Identities=17% Similarity=0.178 Sum_probs=162.1
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCC--CChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHH
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGS--YNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWA 148 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~--~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 148 (436)
++||+.||++|+|+|||++. |..+++.++. +++..++.||++|+.|+++||+|||+||... |+.....
T Consensus 76 e~D~~~i~~~G~N~VRiPi~----~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~p---G~~~~~~--- 145 (408)
T d1h4pa_ 76 EQDFANIASQGFNLVRIPIG----YWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAA---GSQNGFD--- 145 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECT---TCSSCCG---
T ss_pred HHHHHHHHHCCCCEEEEecc----HHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCC---CCCcCCC---
Confidence 78899999999999999653 2234443332 4566799999999999999999999999642 2221111
Q ss_pred hhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC---CcEEEEEeecCCCCCCCCChHHHHHHHHHHHH
Q 013811 149 RSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD---PTIMAWELMNEPRCTSDPSGRTIQAWITEMAS 225 (436)
Q Consensus 149 ~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~---p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~ 225 (436)
..|. .....|.++..++.+.+.++.|++| |+++ ++|+++||.|||........+.+..++.++.+
T Consensus 146 -~~~~---~~~~~~~~~~~~~~~~~~~~~ia~r--------~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~ 213 (408)
T d1h4pa_ 146 -NSGL---RDSYKFLEDSNLAVTINVLNYILKK--------YSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYE 213 (408)
T ss_dssp -GGSS---TTCCCTTSHHHHHHHHHHHHHHHHH--------TTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHH
T ss_pred -CCCc---ccccccCCchHHHHHHHHHHHHHHH--------hcccccccceeeeecccCccccccchHHHHHHHHHHHHH
Confidence 0111 1234566788889999999999999 9997 68999999999986533223457778899999
Q ss_pred HhhccCCC-CEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCC---CChhHhHHHHHHH
Q 013811 226 YVKSIDRN-HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSS---SNDRDQLSFLNNW 301 (436)
Q Consensus 226 ~Ir~~Dp~-~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~~~~~ 301 (436)
.||+.+|. .+|.++ .++.+.. ...+|..........++..|.|.. |... .+..+.+....++
T Consensus 214 ~iR~~~~~~~~iv~~-d~~~~~~------------~w~~~~~~~~~~~~vv~D~H~Y~~-f~~~~~~~s~~~~i~~~~~~ 279 (408)
T d1h4pa_ 214 YLRNNIKSDQVIIIH-DAFQPYN------------YWDDFMTENDGYWGVTIDHHHYQV-FASDQLERSIDEHIKVACEW 279 (408)
T ss_dssp HHHHTTCCCCCEEEE-CTTCCTT------------GGGGSSCGGGTCCSEEEEEEECSC-SSHHHHTCCHHHHHHHHHHH
T ss_pred HHHhccccCceEEEe-cCCCChh------------hhhhhcccCCCCceeEeeccceee-ecCCcccCChhhhhhhhhhh
Confidence 99986555 455544 3442111 011222211122334678999964 3211 1111112222222
Q ss_pred HHHHHHHHHHhcCCcEEEEecCCCCCCC-------------------------------------CCChHHHHHHHHHHH
Q 013811 302 LDTHIQDAEHILRKPILLAEFGKSRKDP-------------------------------------GYSTYQRDVMFNTVY 344 (436)
Q Consensus 302 i~~~~~~a~~~~~kPv~i~EfG~~~~~~-------------------------------------g~~~~~r~~~~~~~~ 344 (436)
.... . ....|++++||+....+. .+ .+.+.++++...
T Consensus 280 ~~~~----~-~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~-~~~~~~~~r~~~ 353 (408)
T d1h4pa_ 280 GTGV----L-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYW-SDERKENTRRYV 353 (408)
T ss_dssp HHHH----T-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGC-CHHHHHHHHHHH
T ss_pred hhhh----h-cccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhC-CHHHHHHHHHHH
Confidence 2211 1 247899999997642210 01 245566777776
Q ss_pred HHHHHHhhcCCCccceeecccccCCCCCC
Q 013811 345 YKIYSSAKRGGAAAGGLFWQLLTEGMDAF 373 (436)
Q Consensus 345 ~~i~~~~~~~~~~~G~~~W~~~~~g~~~~ 373 (436)
++..+.... .+||+||+|..+..+.|
T Consensus 354 eaQ~~~ye~---~~GW~fWt~K~e~~~~W 379 (408)
T d1h4pa_ 354 EAQLDAFEM---RGGWIIWCYKTESSLEW 379 (408)
T ss_dssp HHHHHHHTT---TTEEEESCSCCSSCSTT
T ss_pred HHHHHHHhc---CCCEEEeeeeCCCCCCC
Confidence 665555532 46999999998755567
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=3.3e-20 Score=186.63 Aligned_cols=275 Identities=15% Similarity=0.174 Sum_probs=183.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++|++.|+++|+|+.|+- . .|++++|. +|.+|++.++.++.+|+++.++||++|++|+++ ..|
T Consensus 53 y~~y~eDi~ll~~lG~~~yRfs-i---~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf--------d~P 120 (426)
T d1ug6a_ 53 YRRYEEDIALMQSLGVRAYRFS-V---AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHW--------DLP 120 (426)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEE-C---CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS--------CCB
T ss_pred hhhhHHHHHHHHHcCCCEEEcc-C---CHHHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEeccc--------ccc
Confidence 4679999999999999999983 2 48889987 899999999999999999999999999999875 236
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|. |.+++..+.|.+|++.++++ |++... .|...|||++.. .+ +.
T Consensus 121 ~~l~~~gG--------w~~~~~~~~F~~Ya~~v~~~--------fgd~V~--~w~TiNEP~~~~~~gy~~G~~ppg~~~~ 182 (426)
T d1ug6a_ 121 LALEERGG--------WRSRETAFAFAEYAEAVARA--------LADRVP--FFATLNEPWCSAFLGHWTGEHAPGLRNL 182 (426)
T ss_dssp HHHHTTTG--------GGSHHHHHHHHHHHHHHHHH--------HTTTCC--EEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred hhhhccCc--------cCCHHHHHHHHHHHHHHHHH--------hCcccc--eEEEecCCeeEeeeccccCccccCCcch
Confidence 67654443 78999999999999999999 999754 799999996421 11 11
Q ss_pred H-HHHH---H---HHHHHHHhhccCCCCEEEeC-CCcccCCCCCcc-----------------ccCCCCC--c-------
Q 013811 214 R-TIQA---W---ITEMASYVKSIDRNHLLEAG-LEGFYGQSTPQR-----------------KRVNPNL--D------- 259 (436)
Q Consensus 214 ~-~~~~---w---~~~~~~~Ir~~Dp~~lV~vG-~~g~~~~~~~~~-----------------~~~np~~--~------- 259 (436)
. .++. . ...+.+.+|+..+.....+- ....+.. .+.. ....|.. .
T Consensus 183 ~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~f~d~i~~g~yp~~~~~~~~~~~~ 261 (426)
T d1ug6a_ 183 EAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGE-DPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPVPI 261 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCEECS-CHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceeEEeccCCCCcc-chHHHHHHHHHhhhhcchHhhCCcchhHHhhcccCCCc
Confidence 1 1111 1 23345667777775443321 1111111 0000 0011110 0
Q ss_pred ccchhhhhcCCCCcceEEeecCCCCCC------------CCC-Ch-hHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCC
Q 013811 260 IGTDFVANNLIPGIDFATVHSYPDQWL------------SSS-ND-RDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKS 325 (436)
Q Consensus 260 ~g~df~~~~~~~~iD~~s~H~Y~~~w~------------~~~-~~-~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~ 325 (436)
...|. ......+||+++++|..... ... .. ....+...+.+...+....+.+++||+|+|.|+.
T Consensus 262 ~~~d~--~~ik~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~l~~~~~~y~~Pi~ITENG~~ 339 (426)
T d1ug6a_ 262 LSRDL--ELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGAA 339 (426)
T ss_dssp CTTHH--HHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTTCCBCCHHHHHHHHHHHHHHCSSCEEEEEECCC
T ss_pred chhHH--HHhcCCcCccceeeEEeEEEecCCcccccccccCCCCccCCCCeECccHhHHHHHHHHHhcCCcEEEeecCCc
Confidence 00010 11135789999999974210 000 00 0001112233444455555458999999999988
Q ss_pred CCCC-----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC
Q 013811 326 RKDP-----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 326 ~~~~-----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
.... ...+..|.+|++..+..+.+++++|..+.|+++|++.|+. +|..|
T Consensus 340 ~~~~~~~~~~i~D~~Ri~yl~~~l~~~~~Ai~dGv~V~GY~~WSl~Dn~--EW~~G 393 (426)
T d1ug6a_ 340 YPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNF--EWAFG 393 (426)
T ss_dssp CCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCCC--CGGGG
T ss_pred cCCCCCCccccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchhc--Chhhc
Confidence 6531 1246789999999999999999999999999999999984 46655
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.84 E-value=1.1e-20 Score=191.21 Aligned_cols=283 Identities=14% Similarity=0.141 Sum_probs=188.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++|++.|+++|+|+.|+- . .|++++|. .|.+|+++++.++.+|++++++||+++++|+++ + .|
T Consensus 57 y~~y~eDi~l~~~lG~~~yRfS-i---~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~-d-------lP 124 (447)
T d1e4ia_ 57 YHRYEEDIRLMKELGIRTYRFS-V---SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW-D-------LP 124 (447)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-C---CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------CB
T ss_pred hHhhHHHHHHHHHhCCCEEEcc-C---CHHHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeecc-c-------cc
Confidence 4779999999999999999983 2 48889987 699999999999999999999999999999874 2 36
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|+ |.|++..+.|.+|++.++++ |++. |-.|...|||.+.. .+ +.
T Consensus 125 ~~l~~~gG--------w~n~~~~~~F~~Ya~~v~~~--------fgdr--V~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~ 186 (447)
T d1e4ia_ 125 QALQDAGG--------WGNRRTIQAFVQFAETMFRE--------FHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNL 186 (447)
T ss_dssp HHHHHTTT--------TSSTHHHHHHHHHHHHHHHH--------TBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCH
T ss_pred hhhhcCCC--------CCCHHHHHHHHHHHHHHHHH--------hCCc--cceEEecCCCceeeecccccccccCcccch
Confidence 77766553 78999999999999999999 9885 77899999998532 01 11
Q ss_pred HH-------HHHHHHHHHHHhhccCCCCEEEeCCCc--ccCCCC-Ccc--------------------ccCCCCC-----
Q 013811 214 RT-------IQAWITEMASYVKSIDRNHLLEAGLEG--FYGQST-PQR--------------------KRVNPNL----- 258 (436)
Q Consensus 214 ~~-------~~~w~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~-~~~--------------------~~~np~~----- 258 (436)
.. +..-...+.+.||+..|+..|.+-... ++..+. +.. ....|..
T Consensus 187 ~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi~~~~~~~~p~~~~~~~~~aa~~~~~~~~~~fldpl~~G~yP~~~~~~~ 266 (447)
T d1e4ia_ 187 QTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWF 266 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEECBCCCEEESSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHH
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhhcceeeeeeccccccCCCCchhHHHHHHHHHHHhcccccchhhcCcCcHHHHHHH
Confidence 11 111123345678888888777643321 111111 000 0011100
Q ss_pred ------cccchhhhhcCCCCcceEEeecCCCCC---CCCC----------Chh---HhHHHHHHHHHHHHHHHHHhcCCc
Q 013811 259 ------DIGTDFVANNLIPGIDFATVHSYPDQW---LSSS----------NDR---DQLSFLNNWLDTHIQDAEHILRKP 316 (436)
Q Consensus 259 ------~~g~df~~~~~~~~iD~~s~H~Y~~~w---~~~~----------~~~---~~~~~~~~~i~~~~~~a~~~~~kP 316 (436)
....+-........+||+++++|.... .+.. ..+ ...+...+.|...+....+..++|
T Consensus 267 ~~~~~~~~~~~~d~~~i~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~td~gw~i~P~gl~~~L~~~~~~~~~P 346 (447)
T d1e4ia_ 267 AEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQKYGNID 346 (447)
T ss_dssp HHTTCCCCCCTTHHHHHTCCCSEEEEECCCCEEEEECTTSTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHGGGGCSCC
T ss_pred HhcCCccCCCHHHHHhhcCCccceeeccccceeeecCcccccccccCCCCCCcccccceeecchhHHHHHHHHHHhcCCc
Confidence 000000001123468999999996321 0000 000 001111223333343333436899
Q ss_pred EEEEecCCCCCCC----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC----ceEEe
Q 013811 317 ILLAEFGKSRKDP----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG----YEIVL 381 (436)
Q Consensus 317 v~i~EfG~~~~~~----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~ 381 (436)
|+|+|.|+...+. ...+..|.+|++..+..+.+++++|..+.|+++|++.|+. +|..| |+++.
T Consensus 347 I~ITENG~a~~d~~~~g~i~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dnf--EW~~Gy~~RFGL~~ 417 (447)
T d1e4ia_ 347 IYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDNF--EWAEGYNMRFGMIH 417 (447)
T ss_dssp EEEEEECCCCCCCCBTTBCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGGGGSCCCSEE
T ss_pred eEEecCCCCCCCcccCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCcchhc--ChhhcccCcCceEE
Confidence 9999999876531 1246789999999999999999999999999999999984 46554 45554
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.83 E-value=1.3e-19 Score=184.13 Aligned_cols=276 Identities=15% Similarity=0.177 Sum_probs=181.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++|++.|+++|+|+.|+- . .|++++|. +|.+|++.++.++.+|+++.++||.++++|+++ + .|
T Consensus 56 y~~y~eDi~l~~~lG~~~yRfS-i---~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf-d-------lP 123 (464)
T d1gnxa_ 56 YHRWREDVALMAELGLGAYRFS-L---AWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW-D-------LP 123 (464)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE-C---CHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------CB
T ss_pred hhhhHHHHHHHHHcCCCEEEcc-C---CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecC-c-------cH
Confidence 4679999999999999999983 2 48889987 899999999999999999999999999999874 2 36
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~ 213 (436)
.|....|+ |.|++..+.|.+|++.+++| |++. |-.|...|||++.. .+ +.
T Consensus 124 ~~l~~~gG--------W~n~~~v~~F~~YA~~v~~~--------fgd~--Vk~W~T~NEP~~~~~~gy~~g~~~pg~~~~ 185 (464)
T d1gnxa_ 124 QELENAGG--------WPERATAERFAEYAAIAADA--------LGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDP 185 (464)
T ss_dssp HHHHHTTC--------TTSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred HHHhhhCC--------CCCHHHHHHHHHHHHHHHHH--------hccc--cceeEEccCchhhhhccccccccccccccH
Confidence 77665443 88999999999999999999 9996 55899999996421 11 11
Q ss_pred H-HHHHH------HHHHHHHhhccCC-CCEEEeCCCc--ccCCCC-Ccc--------------------ccCCCC-----
Q 013811 214 R-TIQAW------ITEMASYVKSIDR-NHLLEAGLEG--FYGQST-PQR--------------------KRVNPN----- 257 (436)
Q Consensus 214 ~-~~~~w------~~~~~~~Ir~~Dp-~~lV~vG~~g--~~~~~~-~~~--------------------~~~np~----- 257 (436)
. .++.. ...+++.||+..+ +..|.+.... .+..+. +.. ....|.
T Consensus 186 ~~~~~~~~~~l~Aha~a~~~~~~~~~~~~~ig~~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~dp~~~G~yP~~~~~~ 265 (464)
T d1gnxa_ 186 VAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKD 265 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEEECCCEEESSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccceEEeeeeeeeccchhHHHHHHHHHHHHhhhhccchhhcCCCChHHHHH
Confidence 1 11111 1234556676444 4444432211 111110 000 011110
Q ss_pred --------CcccchhhhhcCCCCcceEEeecCCCCCCCC-----------------CC-------------hh---HhHH
Q 013811 258 --------LDIGTDFVANNLIPGIDFATVHSYPDQWLSS-----------------SN-------------DR---DQLS 296 (436)
Q Consensus 258 --------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~-----------------~~-------------~~---~~~~ 296 (436)
+....|. ......+||+++++|....... .. .+ -..+
T Consensus 266 ~~~~~~~~~~~~~d~--~~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~ 343 (464)
T d1gnxa_ 266 TAGLTDWSFVRDGDL--RLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGWA 343 (464)
T ss_dssp TTTTCCCTTSCTTHH--HHHCCCCSCEEEECSCCEEEC----------------CCCSSTTCTTCCEECCSSCBCTTCCB
T ss_pred hhccCcccccChHHH--HHhhCCcccccccccceEEEecCCCCCccCccccccccccCCCCcccccccCCCCCcCCCCCe
Confidence 0000010 1123578999999995311000 00 00 0011
Q ss_pred HHHHHHHHHHHHHHHhc-CCcEEEEecCCCCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCC
Q 013811 297 FLNNWLDTHIQDAEHIL-RKPILLAEFGKSRKD-----PGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 297 ~~~~~i~~~~~~a~~~~-~kPv~i~EfG~~~~~-----~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~ 370 (436)
...+-|...+....+.+ ++||+|+|.|+...+ ....+..|.+|++..+..+..++++|..+.|+++|++.|+-
T Consensus 344 i~P~Gl~~~L~~i~~~Y~~~PI~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~- 422 (464)
T d1gnxa_ 344 VDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNF- 422 (464)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEEEECCCCCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC-
T ss_pred EecchhHHHHHHHHHHcCCCCEEEEecCcccccCCCCcCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCchhhc-
Confidence 12233444454444445 589999999997653 11246799999999999999999999999999999999984
Q ss_pred CCCCCC
Q 013811 371 DAFRDG 376 (436)
Q Consensus 371 ~~~~dg 376 (436)
+|..|
T Consensus 423 -EW~~G 427 (464)
T d1gnxa_ 423 -EWAHG 427 (464)
T ss_dssp -CGGGG
T ss_pred -Chhhc
Confidence 46555
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.83 E-value=3.9e-20 Score=187.24 Aligned_cols=278 Identities=13% Similarity=0.147 Sum_probs=184.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++|++.|+++|+|+.|+ .. .|++++|. .|.+|++.++.++.+|+++.++||..+++|+++ ..|
T Consensus 57 y~~y~eDi~l~~~lG~~~yRf-Si---~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~--------d~P 124 (449)
T d1qoxa_ 57 YHRVEEDVQLLKDLGVKVYRF-SI---SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHW--------DLP 124 (449)
T ss_dssp TSCHHHHHHHHHHHTCSEEEE-EC---CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS--------CCB
T ss_pred hhhhHHHHHHHHHcCCCEEEc-cC---CHHHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecc--------ccc
Confidence 467999999999999999998 32 48888887 589999999999999999999999999999874 236
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---------C---Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---------P---SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---------~---~~ 213 (436)
.|....|+ |.+++..+.|.+|++.++++ |++. |-.|...|||++... + +.
T Consensus 125 ~~l~~~gG--------w~~~~~~~~F~~Ya~~v~~~--------fgd~--V~~W~T~NEP~~~~~~gy~~g~~~Pg~~~~ 186 (449)
T d1qoxa_ 125 QALQDQGG--------WGSRITIDAFAEYAELMFKE--------LGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDL 186 (449)
T ss_dssp HHHHTTTG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred chhccccC--------cCCHHHHHHHHHHHHHHHHH--------hccc--ccceEEecCcceeccccccccccCcccccH
Confidence 77765543 78999999999999999999 9995 668999999975321 1 11
Q ss_pred H-HHHH------HHHHHHHHhhccCCCCEEEeCCCcc--cCCC-CCcc--------------------ccCCCCC-----
Q 013811 214 R-TIQA------WITEMASYVKSIDRNHLLEAGLEGF--YGQS-TPQR--------------------KRVNPNL----- 258 (436)
Q Consensus 214 ~-~~~~------w~~~~~~~Ir~~Dp~~lV~vG~~g~--~~~~-~~~~--------------------~~~np~~----- 258 (436)
. .++. -...+.+.+|+..++..|.+..... +..+ .+.. ....|..
T Consensus 187 ~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi~~~~~~~~p~~~~~~d~~Aa~~~~~~~~~~~~dp~~~G~yp~~~~~~~ 266 (449)
T d1qoxa_ 187 QLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWY 266 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEECCCCEEEESSSCHHHHHHHHHHHHTTTHHHHHHHHTSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCceeeeeccccccccCChHHHHHHHHHHHHHhhcccccCceecCCCcHHHHHHH
Confidence 1 1111 1234457788888887776543321 1111 0000 0001100
Q ss_pred ------cccchhhhhcCCCCcceEEeecCCCCCC---C------C--------CC-hhHhHHHHHHHHHHHHHHHHHhcC
Q 013811 259 ------DIGTDFVANNLIPGIDFATVHSYPDQWL---S------S--------SN-DRDQLSFLNNWLDTHIQDAEHILR 314 (436)
Q Consensus 259 ------~~g~df~~~~~~~~iD~~s~H~Y~~~w~---~------~--------~~-~~~~~~~~~~~i~~~~~~a~~~~~ 314 (436)
....+-........+||+++++|..... . . .. .+...+...+-|...+....+.++
T Consensus 267 ~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~td~gwei~P~Gl~~~L~~i~~~y~ 346 (449)
T d1qoxa_ 267 ENLGYKPPIVDGDMELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRYTADKYG 346 (449)
T ss_dssp HHHTCCCCCCTTHHHHHCCCCSEEEEECSCEEEEEECSSGGGTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHHHHHTT
T ss_pred HhccccccCCHHHHHHhcCCcccceecccccceeecCCccccCcccccccCCCCccCCCCCeeecchhHHHHHHHHHHhC
Confidence 0000000011235689999999963210 0 0 00 000001112223333333333366
Q ss_pred C-cEEEEecCCCCCCC-----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC
Q 013811 315 K-PILLAEFGKSRKDP-----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 315 k-Pv~i~EfG~~~~~~-----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
. ||+|+|.|+...+. ...+..|.+|++..+..+.+++++|..+.|+++|++.|+. +|..|
T Consensus 347 ~p~i~ITENG~a~~d~~~~~~~i~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dn~--EW~~G 412 (449)
T d1qoxa_ 347 NPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNF--EWAEG 412 (449)
T ss_dssp SCCEEEEECCCCCCCCCCTTSSCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGT
T ss_pred CCeEEEeccCcccCCCCCccccccCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCcchhc--Chhhc
Confidence 5 48999999876531 1246899999999999999999999999999999999984 46555
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.83 E-value=2.2e-20 Score=188.97 Aligned_cols=278 Identities=13% Similarity=0.180 Sum_probs=183.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
-+.+++|++.||++|+|+.|+-+ .|++++|. .|.+|++.++.+|.+|++++++||+.+++|+++ ..|
T Consensus 56 y~~y~eDi~l~~~lG~~~yRfsi----~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf--------~~P 123 (443)
T d2j78a1 56 YNRWKEDIEIIEKLGVKAYRFSI----SWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW--------DLP 123 (443)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS--------CCB
T ss_pred hhhhHHHHHHHHHcCCCEEEccC----CHHHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCc--------cch
Confidence 46799999999999999999832 48888886 589999999999999999999999999999874 236
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------C----Ch
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------P----SG 213 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~----~~ 213 (436)
.|....|+ |.|++..+.|.+|++.+++| |++. |-.|...|||+.... + +.
T Consensus 124 ~wl~~~gG--------w~~~~~v~~F~~Ya~~v~~~--------~gd~--V~~w~TiNEP~~~~~~gy~~G~~pPg~~~~ 185 (443)
T d2j78a1 124 FALQLKGG--------WANREIADWFAEYSRVLFEN--------FGDR--VKNWITLNEPWVVAIVGHLYGVHAPGMRDI 185 (443)
T ss_dssp HHHHTTTG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred hhhhhcCC--------ccChHHHHHHHHHHHHHHHH--------hCcc--ccceEeccCceeEeecccccCcccccccch
Confidence 77765443 78999999999999999999 9986 568999999975321 1 11
Q ss_pred H-HHHH------HHHHHHHHhhccCCCCEEEeCCCc--ccCCCC-Ccc--------------c-------cCCCCC----
Q 013811 214 R-TIQA------WITEMASYVKSIDRNHLLEAGLEG--FYGQST-PQR--------------K-------RVNPNL---- 258 (436)
Q Consensus 214 ~-~~~~------w~~~~~~~Ir~~Dp~~lV~vG~~g--~~~~~~-~~~--------------~-------~~np~~---- 258 (436)
. .++. -...+.+.||+..|+..|.+-... ++..+. +.. + ...|..
T Consensus 186 ~~~~~~~~n~l~AHa~A~~~~~~~~~~~~vGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~f~d~~~~g~yp~~~~~~ 265 (443)
T d2j78a1 186 YVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEF 265 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEEEEEESSSCHHHHHHHHHHHHHHSTHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCceeeeecccccccCCccchhHHHHHHHHHHhhhhhccchhhcCCChHHHHHh
Confidence 1 1111 123446778888887766542211 111110 000 0 001100
Q ss_pred -----cccchhhhhcCCCCcceEEeecCCCCC---CCCC-----------Ch-hHhHHHHHHHHHHHHHHHHHhcCCc-E
Q 013811 259 -----DIGTDFVANNLIPGIDFATVHSYPDQW---LSSS-----------ND-RDQLSFLNNWLDTHIQDAEHILRKP-I 317 (436)
Q Consensus 259 -----~~g~df~~~~~~~~iD~~s~H~Y~~~w---~~~~-----------~~-~~~~~~~~~~i~~~~~~a~~~~~kP-v 317 (436)
.....-........+||+++++|.... .+.. +. +...+...+.|...+....+.++.| |
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~l~~~~~~y~~p~I 345 (443)
T d2j78a1 266 AREYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEV 345 (443)
T ss_dssp HGGGSCTTGGGGHHHHTCCCSEEEEEEEEEEEEEECTTC-CCEEEECCSSCBCTTCCBCCTHHHHHHHHHHHHHHCCSCE
T ss_pred hhhcCcccchHHHHHhhCCcccceeecccceEEecCCCCCcccccccccCCcCCCCcEEecchHHHHHHHHHHhcCCCcE
Confidence 000000011224678999999995211 0000 00 0000111222333333333346776 9
Q ss_pred EEEecCCCCCCC----C-CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC
Q 013811 318 LLAEFGKSRKDP----G-YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 318 ~i~EfG~~~~~~----g-~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
+|+|+|+...+. + ..+..|.+|++..+..+.+++++|..+.|+++|++.|+. +|..|
T Consensus 346 ~ItENG~a~~d~~~~~g~v~D~~Ri~yl~~hL~~v~~Ai~dGv~V~GY~~WSllDn~--EW~~G 407 (443)
T d2j78a1 346 YITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNF--EWAEG 407 (443)
T ss_dssp EEEEECCCCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGG
T ss_pred EEEecccccCCCCCccCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchhc--Chhhc
Confidence 999999976531 1 236789999999999999999999999999999999984 46554
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.82 E-value=6.2e-20 Score=186.73 Aligned_cols=278 Identities=17% Similarity=0.190 Sum_probs=183.5
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC-CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS-PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~ 145 (436)
.+.+++|++.|+++|+|+.|+ .. .|++++|. +|.+|++.++.++.+|+++.++||..+++|+++ + .|
T Consensus 53 y~~y~eDi~l~~~lG~~~yRf-Si---sWsRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~-d-------lP 120 (468)
T d1pbga_ 53 YHKYPVDLELAEEYGVNGIRI-SI---AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-D-------TP 120 (468)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE-EC---CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-C-------CB
T ss_pred hhhhHHHHHHHHHhCCCEEEc-cC---CHHHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecc-c-------ch
Confidence 578999999999999999998 33 48888886 789999999999999999999999999999874 3 36
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC---------C----C
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD---------P----S 212 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~---------~----~ 212 (436)
.|....|. |.+++..+.|.+|++.++++ |++ |-.|...|||++... + .
T Consensus 121 ~~l~~~GG--------w~~~~~v~~F~~Ya~~~~~~--------fgd---vk~W~T~NEP~~~~~~gy~~G~~~P~~~~~ 181 (468)
T d1pbga_ 121 EALHSNGD--------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181 (468)
T ss_dssp HHHHHTTG--------GGSTHHHHHHHHHHHHHHHH--------CTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSC
T ss_pred hhHhhcCc--------cCCHHHHHHHHHHHHHHHHh--------cCC---ceEEEEecCccccccccccccccCCccccc
Confidence 67766553 78999999999999999999 964 357999999985310 1 1
Q ss_pred hH-HHHHH------HHHHHHHhhccCCCCEEEeCCCc--ccC--CCCCcc--------------------ccCCCCC-cc
Q 013811 213 GR-TIQAW------ITEMASYVKSIDRNHLLEAGLEG--FYG--QSTPQR--------------------KRVNPNL-DI 260 (436)
Q Consensus 213 ~~-~~~~w------~~~~~~~Ir~~Dp~~lV~vG~~g--~~~--~~~~~~--------------------~~~np~~-~~ 260 (436)
.. .++.. ..++.+.+|+..|+..|.+-... ++. ...+.. ....|.. ..
T Consensus 182 ~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~ig~~~~~~~~~p~~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~ 261 (468)
T d1pbga_ 182 LAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTME 261 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCCEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHH
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHhhccccccceEEecccEEeeccCCHHHHHHHHHHHHHhhHHHhhhhcCCCCCHHHHH
Confidence 11 12222 23446677888888776543221 111 111110 0001100 00
Q ss_pred ---------c-------chhh-hhcCCCCcceEEeecCCCCCCC----CC--------------------------C-hh
Q 013811 261 ---------G-------TDFV-ANNLIPGIDFATVHSYPDQWLS----SS--------------------------N-DR 292 (436)
Q Consensus 261 ---------g-------~df~-~~~~~~~iD~~s~H~Y~~~w~~----~~--------------------------~-~~ 292 (436)
+ .|+. .......+||+++++|...+.. .. . .+
T Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (468)
T d1pbga_ 262 GVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVP 341 (468)
T ss_dssp HHHHHHHHHCCCCCCCHHHHHHHHHHTTCCCEEEEECSCCEEEECCCCCCBC-----------CCEETTTEEECCCTTCC
T ss_pred HHHHHhhhhCCCCCCCcchhhhhhccCCccceecccccceeEEeccCCCcccccCCCCccCcccccccccccccCCCCCC
Confidence 0 0000 0123456799999999532100 00 0 00
Q ss_pred -H--hHHHHHHHHHHHHHHHHHhc--CCcEEEEecCCCCCCC----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeec
Q 013811 293 -D--QLSFLNNWLDTHIQDAEHIL--RKPILLAEFGKSRKDP----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFW 363 (436)
Q Consensus 293 -~--~~~~~~~~i~~~~~~a~~~~--~kPv~i~EfG~~~~~~----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W 363 (436)
. ..+...+.|...+....+.+ .+||+|+|.|+...+. ...+..|.+|++..+..+.+++.+|..+.|+++|
T Consensus 342 ~t~~gW~i~P~gl~~~l~~~~~~y~~~~pI~ITENG~~~~d~~~~~~i~D~~Ri~yl~~hL~~l~~Ai~dGv~V~GY~~W 421 (468)
T d1pbga_ 342 RTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIW 421 (468)
T ss_dssp -----CCCCTHHHHHHHHHHHHHCTTCCCEEEEECCCCBCCCEETTEECCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCCeehhhHHHHHHHHHHHhcCCCCCEEEecCCcCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEeec
Confidence 0 00111233444444444434 4899999999976531 1235789999999999999999999999999999
Q ss_pred ccccCCCCCCCCCc
Q 013811 364 QLLTEGMDAFRDGY 377 (436)
Q Consensus 364 ~~~~~g~~~~~dg~ 377 (436)
++.|+. +|..||
T Consensus 422 SllDnf--EW~~Gy 433 (468)
T d1pbga_ 422 SLMDVF--SWSNGY 433 (468)
T ss_dssp CSBCCC--BTTTBT
T ss_pred ccchhc--Chhhcc
Confidence 999984 576663
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.81 E-value=9.7e-19 Score=173.66 Aligned_cols=245 Identities=15% Similarity=0.127 Sum_probs=155.1
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCc-cCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc--CCCCCCChhhhhhH
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQ-RSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN--NYDSFGGKKQYVNW 147 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq-~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~--~w~~~gg~~~y~~W 147 (436)
++.|+.||++|+|+||+.++.+..+...+ +..|..+ |+.+|++++.|+++||+|+|+||. .|.+.|+..
T Consensus 41 ~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~---l~~~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~----- 112 (387)
T d1ur4a_ 41 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNND---LEKAIQIGKRATANGMKLLADFHYSDFWADPAKQK----- 112 (387)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCC---HHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCC-----
T ss_pred ccHHHHHHHcCCCEEEeecccCCcccccCcCCCcccc---HHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCCCCC-----
Confidence 34699999999999999654332111111 1223333 899999999999999999999983 343322210
Q ss_pred HhhcCCCCCCCCCCC--CChHHHHHHHHHHHHHHhccccccccccCCCCc-EEEEEeecCCCCCCC--CChHHHHHHHHH
Q 013811 148 ARSQGQFLTSDDDFF--RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT-IMAWELMNEPRCTSD--PSGRTIQAWITE 222 (436)
Q Consensus 148 ~~~~G~~~~~~~~f~--~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~-I~~weL~NEp~~~~~--~~~~~~~~w~~~ 222 (436)
.+..+. ..++..+...+|.+.++++ +++++. +.+|||+|||+.... .+.+.+.+++++
T Consensus 113 ---------~p~~w~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~ 175 (387)
T d1ur4a_ 113 ---------APKAWANLNFEDKKTALYQYTKQSLKA--------MKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNA 175 (387)
T ss_dssp ---------CCGGGTTCCHHHHHHHHHHHHHHHHHH--------HHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHH
T ss_pred ---------CchhhhccchhHHHHHHHHHHHHHHHH--------HhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHH
Confidence 011111 2245667778888888888 666544 668999999987532 245789999999
Q ss_pred HHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHH
Q 013811 223 MASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWL 302 (436)
Q Consensus 223 ~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i 302 (436)
++++||+.||++.|+++..+...... +..-.+... ......|++++|+||. |... . ..+...+
T Consensus 176 ~~~avr~~dp~~~vi~~~~~~~~~~~---------~~~~~~~~~-~~~~~~d~ig~s~Y~~-w~~~--~----~~~~~~l 238 (387)
T d1ur4a_ 176 GSQAVRETDSNILVALHFTNPETSGR---------YAWIAETLH-RHHVDYDVFASSYYPF-WHGT--L----KNLTSVL 238 (387)
T ss_dssp HHHHHHHHCTTSEEEEEECCTTSTTH---------HHHHHHHHH-HTTCCCSEEEEEECTT-TSCC--H----HHHHHHH
T ss_pred HHHHHHhcCCCceEEEeccCccchHH---------HHHHHHHHH-hcCCCcccccceeecc-cCcc--H----HHHHHHH
Confidence 99999999999999887644211100 000011111 1234578999999997 4321 2 2222233
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCC----------------CC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecc
Q 013811 303 DTHIQDAEHILRKPILLAEFGKSRKD----------------PG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364 (436)
Q Consensus 303 ~~~~~~a~~~~~kPv~i~EfG~~~~~----------------~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~ 364 (436)
... +.+ ++|||+|+|++.+... .+ .+.+.+.++++.+.+.+.+. +....|++||.
T Consensus 239 ~~l---~~~-~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~---~~~G~G~~YWe 311 (387)
T d1ur4a_ 239 TSV---ADT-YGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDV---GEAGIGVFYWE 311 (387)
T ss_dssp HHH---HHH-HCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTT---CTTEEEEEEEC
T ss_pred HHH---HHH-hCCceEEEEecccccCCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhc---CCCceEEEEec
Confidence 222 233 7999999999976431 01 24566677887777665442 23467999994
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.81 E-value=1.5e-19 Score=183.53 Aligned_cols=274 Identities=15% Similarity=0.225 Sum_probs=177.2
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC--CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS--PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQY 144 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~--pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y 144 (436)
-+++++|++.|+++|+|+.|+ .. .|++++|. +|.+|++.++.+|++|++|.++||++++||+++ ..
T Consensus 56 y~ry~eDi~l~~~lG~~~yRf-Si---~WsRI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf--------d~ 123 (462)
T d1wcga1 56 YHKYKEDVAIIKDLNLKFYRF-SI---SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHW--------DL 123 (462)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE-EC---CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS--------CC
T ss_pred hhhhHHHHHHHHHhCCCEEEe-eC---cHHHcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccc--------cc
Confidence 478999999999999999998 32 48889986 799999999999999999999999999999874 24
Q ss_pred hhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------C---C-
Q 013811 145 VNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------P---S- 212 (436)
Q Consensus 145 ~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~---~- 212 (436)
|.|....|+ |.+++..+.|.+|++.+++| |++. |-.|...|||.+... + .
T Consensus 124 P~~l~~~GG--------W~~~~~v~~F~~Ya~~v~~~--------fgd~--V~~W~T~NEP~~~~~~~~~~~~~P~~~~~ 185 (462)
T d1wcga1 124 PQYLQDLGG--------WVNPIMSDYFKEYARVLFTY--------FGDR--VKWWITFNEPIAVCKGYSIKAYAPNLNLK 185 (462)
T ss_dssp BHHHHHTTG--------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHSSSSTTCCCCH
T ss_pred hhhhhhcCC--------cccHHHHHHHHHHHHHHHHh--------cccc--chheeeecCCceeeeccccccccCCcccc
Confidence 678776554 78999999999999999999 9996 568999999974310 1 0
Q ss_pred h-HHHHHH------HHHHHHHhhccCC---CCEEEeCCCc--ccCC--CCCcc--------------------ccCCCC-
Q 013811 213 G-RTIQAW------ITEMASYVKSIDR---NHLLEAGLEG--FYGQ--STPQR--------------------KRVNPN- 257 (436)
Q Consensus 213 ~-~~~~~w------~~~~~~~Ir~~Dp---~~lV~vG~~g--~~~~--~~~~~--------------------~~~np~- 257 (436)
. ...+.- ...+.+.||++.+ +..|.+-... +... ..+.. ....|.
T Consensus 186 ~~~~~~a~h~~l~AHa~A~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~d~~aa~~~~~~~n~~~~d~~~~g~yP~~ 265 (462)
T d1wcga1 186 TTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPI 265 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEECCCEEEESSTTCHHHHHHHHHHHHHHTHHHHHHHHTSSSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccccceeeeeccceeEecCCCchHHHHHHHHHHHhhhcccccceeCCCCCHH
Confidence 1 111221 1233455666532 3333322111 1111 01000 000110
Q ss_pred ---------------------CcccchhhhhcCCCCcceEEeecCCCCCC-----------CCC------Chh----Hh-
Q 013811 258 ---------------------LDIGTDFVANNLIPGIDFATVHSYPDQWL-----------SSS------NDR----DQ- 294 (436)
Q Consensus 258 ---------------------~~~g~df~~~~~~~~iD~~s~H~Y~~~w~-----------~~~------~~~----~~- 294 (436)
+. ..| .......+||+++++|..... +.. ... ..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~p~~~-~~d--~~~i~~~~DfiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (462)
T d1wcga1 266 MKKWVDQKSKEEGLPWSKLPKFT-KDE--IKLLKGTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLKPNET 342 (462)
T ss_dssp HHHHHHHHHHHTTCSSCSSCCCC-HHH--HHHHTTCCSSEEEECCCEEEEEESCCSSTTSCGGGCEEEECCGGGCCSSCC
T ss_pred HHHHHHHhhHhcCCccccCCCcC-HHH--HHHhcCCccEEEEeeeecceeecccCCCCCcCCCccccccccCCccCCCCC
Confidence 00 000 011235689999999942110 000 000 00
Q ss_pred --HHHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCccceeecccccCCC
Q 013811 295 --LSFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAK-RGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 295 --~~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~-~~~~~~G~~~W~~~~~g~ 370 (436)
.....+-|...+....+.+++| |+|+|.|+..++ ...+..|.+|++..+..+.+++. +|..+.|+++|++.|+.
T Consensus 343 ~~~~~~P~Gl~~~L~~i~~~Y~~ppI~ITENG~a~~g-~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~- 420 (462)
T d1wcga1 343 PYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDG-QLDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNF- 420 (462)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTSCCEEEEEECCCBSC-CSSCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECSBCCC-
T ss_pred CCceeChHHHHHHHHHHHHhcCCCCEEEecCCcCCCC-CcCCHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecCcchhc-
Confidence 0001333444444444446555 999999998653 23567899999999999888874 58899999999999984
Q ss_pred CCCCCC
Q 013811 371 DAFRDG 376 (436)
Q Consensus 371 ~~~~dg 376 (436)
+|..|
T Consensus 421 -EW~~G 425 (462)
T d1wcga1 421 -EWFYG 425 (462)
T ss_dssp -CGGGG
T ss_pred -Chhhc
Confidence 46555
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.80 E-value=4.3e-20 Score=188.42 Aligned_cols=284 Identities=15% Similarity=0.201 Sum_probs=179.4
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCC----------------------------CCCChhhhhhHHHHHHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSP----------------------------GSYNEQMFKGLDFVIAE 119 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~p----------------------------g~~~~~~l~~lD~~i~~ 119 (436)
+.+++|++.||++|+|+.|+-+ .|++++|.+ |.+|+++++.++.+|++
T Consensus 61 ~~y~eDi~l~~~lG~~~yRfSI----~WsRI~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~ 136 (489)
T d1uwsa_ 61 GNYKTFHDNAQKMGLKIARLNV----EWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKD 136 (489)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEC----CHHHHCCSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHcCCCEEEecc----cHHhcCcCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 5799999999999999999832 366777653 67999999999999999
Q ss_pred HHHcCCEEEEecccCCCCCCChhhhhhHHhhc-----CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC
Q 013811 120 ARKYGIKLILSLANNYDSFGGKKQYVNWARSQ-----GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP 194 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~-----G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p 194 (436)
+.++||..+++|+++ + .|.|.... + .. ....=|.+++..+.|.+|++.++++ |++.
T Consensus 137 l~~~GIeP~VTL~H~-d-------lP~~L~d~~~~~~~-~f-~~~GGW~n~~~v~~F~~YA~~v~~~--------fgdr- 197 (489)
T d1uwsa_ 137 LKSRGLYFILNMYHW-P-------LPLWLHDPIRVRRG-DF-TGPSGWLSTRTVYEFARFSAYIAWK--------FDDL- 197 (489)
T ss_dssp HHHTTCEEEEESCSS-C-------CBTTTBCHHHHHTT-CC-SSCBGGGSHHHHHHHHHHHHHHHHH--------HTTT-
T ss_pred HHHcCCccEEEEcCC-C-------CcHHHHhhhhcccc-cc-ccCCCcCCHHHHHHHHHHHHHHHHH--------hcCc-
Confidence 999999999999874 2 24443210 0 00 0012278999999999999999999 9996
Q ss_pred cEEEEEeecCCCCCC----------C-C---ChH-------HHHHHHHHHHHHhhccCCCCE-EEeCCCcccCCCCCcc-
Q 013811 195 TIMAWELMNEPRCTS----------D-P---SGR-------TIQAWITEMASYVKSIDRNHL-LEAGLEGFYGQSTPQR- 251 (436)
Q Consensus 195 ~I~~weL~NEp~~~~----------~-~---~~~-------~~~~w~~~~~~~Ir~~Dp~~l-V~vG~~g~~~~~~~~~- 251 (436)
|-.|...|||++.. . + +.. .+..-..++.+.||+..+..+ |+.....++.......
T Consensus 198 -Vk~WiTiNEP~~~~~~gy~g~~~~~pp~~~~~~~~~~~~hn~l~Aha~a~~~~~~~~~~~igi~~~~~~~~p~~~~d~~ 276 (489)
T d1uwsa_ 198 -VDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDME 276 (489)
T ss_dssp -CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSTTCHH
T ss_pred -ceEEEeeCCCcEEeecccccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcceeEEeccchhhcchhHHH
Confidence 55799999997431 0 1 111 111122344567788876544 3333322222111000
Q ss_pred -----------ccCCCC----C-cccchhhhhcCCCCcceEEeecCCCCC--------------CCCC--------Chh-
Q 013811 252 -----------KRVNPN----L-DIGTDFVANNLIPGIDFATVHSYPDQW--------------LSSS--------NDR- 292 (436)
Q Consensus 252 -----------~~~np~----~-~~g~df~~~~~~~~iD~~s~H~Y~~~w--------------~~~~--------~~~- 292 (436)
+..+|. + ..............+||+++++|.... .... ..+
T Consensus 277 a~~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (489)
T d1uwsa_ 277 AVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPT 356 (489)
T ss_dssp HHHHHHHHHTHHHHHHHHHCEEC----CEECTTTTTCCSEEEEEEEEEEEEEECSSSEEECTTSTTSSCSSSBCTTSCBB
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhhhhhhhhccccCccCcceecccchhhcccCCCcccccCccCcccccccccCCCCCc
Confidence 000000 0 000001112234678999999994211 0000 000
Q ss_pred H--hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCC
Q 013811 293 D--QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGM 370 (436)
Q Consensus 293 ~--~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~ 370 (436)
. ..+...+-|...+....+.+++||+|+|.|+... .+..|..|++..+..+.+++++|..+.|+++|++.|+.
T Consensus 357 t~~gw~i~P~Gl~~~L~~~~~rY~~PI~ITENG~~~~----~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn~- 431 (489)
T d1uwsa_ 357 SDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADD----ADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNY- 431 (489)
T ss_dssp CTTCCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCT----TCSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBCCC-
T ss_pred CcCCCccCchhhhHHHHHHhhccCCCEEEecCCCCCC----CcchHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhh-
Confidence 0 0011122244444444434799999999999765 34579999999999999999999999999999999984
Q ss_pred CCCCCC----ceEEe
Q 013811 371 DAFRDG----YEIVL 381 (436)
Q Consensus 371 ~~~~dg----~~i~~ 381 (436)
+|..| |+++.
T Consensus 432 -EW~~Gy~~RfGL~~ 445 (489)
T d1uwsa_ 432 -EWASGFSMRFGLLK 445 (489)
T ss_dssp -CGGGGGGSCCCSEE
T ss_pred -ChhhhhhccCceEE
Confidence 46554 45554
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.80 E-value=1.6e-19 Score=181.27 Aligned_cols=269 Identities=14% Similarity=0.169 Sum_probs=171.1
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVN 146 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~ 146 (436)
-+++++|++.|+++|+|+.|+- . .|++++|.+|.+|++.++.++.+|+++.++||..+++|++ |+ .|.
T Consensus 49 y~ry~eDi~ll~~lG~~~yRfS-i---sWsRI~P~~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H-~d-------~P~ 116 (423)
T d1vffa1 49 WELYRDDIQLMTSLGYNAYRFS-I---EWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLHH-FT-------SPL 116 (423)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEE-C---CHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CBH
T ss_pred HHhhHHHHHHHHHhCCCEEEec-C---cHHHeecCCCccChHHHHHHHHHHHHHHhcCCeeEEeecC-Cc-------chH
Confidence 4789999999999999999983 3 4888999999999999999999999999999999999976 33 366
Q ss_pred HHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC---Ch-
Q 013811 147 WARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP---SG- 213 (436)
Q Consensus 147 W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~---~~- 213 (436)
|....|. |.+++..+.|.+|++.+.++ + + .|-.|...|||.+.. .+ +.
T Consensus 117 ~l~~~gG--------w~~~~~v~~F~~Ya~~~~~~--------~-d--~Vk~W~T~NEP~~~~~~gy~~G~~pPg~~~~~ 177 (423)
T d1vffa1 117 WFMKKGG--------FLREENLKHWEKYIEKVAEL--------L-E--KVKLVATFNEPMVYVMMGYLTAYWPPFIRSPF 177 (423)
T ss_dssp HHHHTTG--------GGSGGGHHHHHHHHHHHHHH--------T-T--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHH
T ss_pred HHHhhhh--------ccCHHHHHHHHHHHHHHHHh--------h-c--ccceeeccCCcceeeeeccccccccccccCHH
Confidence 7665443 77899999999999987765 5 3 477899999998531 01 11
Q ss_pred HHHHHH---H---HHHHHHhhccCCCCEEEeCCCcc-cCCCC-Ccc-------------ccCCCCCcccc---hhhh-hc
Q 013811 214 RTIQAW---I---TEMASYVKSIDRNHLLEAGLEGF-YGQST-PQR-------------KRVNPNLDIGT---DFVA-NN 268 (436)
Q Consensus 214 ~~~~~w---~---~~~~~~Ir~~Dp~~lV~vG~~g~-~~~~~-~~~-------------~~~np~~~~g~---df~~-~~ 268 (436)
..++.. + ..+.+.||+..+..++ +..+. +..+. +.. +..+|.+ .|. .+.. ..
T Consensus 178 ~~~~~~~n~l~Aha~a~~~~~~~~~~~~~--~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~-~G~yp~~~~~~~~ 254 (423)
T d1vffa1 178 KAFKVAANLLKAHAIAYELLHGKFKVGIV--KNIPIILPASDKERDRKAAEKADNLFNWHFLDAIW-SGKYRGVFKTYRI 254 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEE--EECCEEEESSSSHHHHHHHHHHHHHHTHHHHHHHH-HCEEECSSCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccee--eecccccCCCchHHHHHHHHHhhhhccccccccee-cCccchhHHhhcC
Confidence 112211 1 2233445544432222 11111 11110 000 0000000 000 0000 01
Q ss_pred CCCCcceEEeecCCCCC-----CC----------C---CChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC
Q 013811 269 LIPGIDFATVHSYPDQW-----LS----------S---SNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG 330 (436)
Q Consensus 269 ~~~~iD~~s~H~Y~~~w-----~~----------~---~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g 330 (436)
....+||+++++|.... .+ . .......+...+.+........ .+++||+|+|.|+...
T Consensus 255 ~~~~~DfiGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~p~gl~~~~~~~~-~y~~Pi~ItENG~~~~--- 330 (423)
T d1vffa1 255 PQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKKAS-RYGRPLYITENGIATL--- 330 (423)
T ss_dssp CCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHHHHHHHG-GGCSCEEEEECCCCCS---
T ss_pred CCCCcchheeccccceeeeccCCCccccccccccCcccccCCCCceeccchhHHHHHHHh-ccCceeEEecCCCCcc---
Confidence 23567999999996211 00 0 0000000001111222222233 3899999999998753
Q ss_pred CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCCCCCCCCC
Q 013811 331 YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEGMDAFRDG 376 (436)
Q Consensus 331 ~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g~~~~~dg 376 (436)
.++.|.+|++..+..+.+++++|..+.|+++|++.|+- +|..|
T Consensus 331 -dD~~Ri~yl~~hl~~~~~Ai~dGV~v~GY~~WSl~Dn~--EW~~G 373 (423)
T d1vffa1 331 -DDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDNY--EWKEG 373 (423)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCCC--CGGGT
T ss_pred -CcHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchhc--Chhhc
Confidence 57899999999999999999999999999999999984 46554
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.80 E-value=1e-18 Score=178.28 Aligned_cols=283 Identities=14% Similarity=0.165 Sum_probs=181.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC---CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS---PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~---pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
-+++++|++.|+++|+|+.|+ .. .|++++|. +|.+|++.++.++.+|+++.++||.+++||+++ +
T Consensus 66 y~ry~eDi~l~~~lG~~~yRf-Si---sWsRI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hf-d------- 133 (484)
T d1v02a_ 66 YHMYAEDVRLLKEMGMDAYRF-SI---SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW-D------- 133 (484)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE-EC---CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------
T ss_pred hhhhHHHHHHHHHhCCCEEEc-cC---CHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCC-c-------
Confidence 478999999999999999998 32 37788885 689999999999999999999999999999764 2
Q ss_pred hhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------C----
Q 013811 144 YVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------D---- 210 (436)
Q Consensus 144 y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~---- 210 (436)
.|.|....+ ..|.|++..+.|.+|++.+++| |++. |-.|...|||++.. .
T Consensus 134 ~P~~l~~~~-------Ggw~n~~~~~~F~~Ya~~v~~~--------fgd~--V~~W~T~NEP~~~~~~~y~~g~~~pg~~ 196 (484)
T d1v02a_ 134 TPQALVDAY-------GGFLDERIIKDYTDFAKVCFEK--------FGKT--VKNWLTFNEPETFCSVSYGTGVLAPGRC 196 (484)
T ss_dssp CBHHHHHHH-------CGGGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCBC
T ss_pred ccceeeeec-------CcccCHHHHHHHHHhhHHHHHH--------hcch--hhceEEecCcceecccccccceeccccc
Confidence 355654321 1388999999999999999999 9996 55899999996321 0
Q ss_pred --------C---C-hHHHHH------HHHHHHHHhhccCCC--CEEEeCCC--cccCCCC-Ccc----------------
Q 013811 211 --------P---S-GRTIQA------WITEMASYVKSIDRN--HLLEAGLE--GFYGQST-PQR---------------- 251 (436)
Q Consensus 211 --------~---~-~~~~~~------w~~~~~~~Ir~~Dp~--~lV~vG~~--g~~~~~~-~~~---------------- 251 (436)
+ + .+.++. -..++.+.||++.+. ..|.+... .++..+. +..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~~~ig~~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~f~ 276 (484)
T d1v02a_ 197 SPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFL 276 (484)
T ss_dssp CTTSCSSBCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCTTTCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCceeeEecccceecCCCchHHHHHHHHHHHHHhhhhh
Confidence 0 0 111111 123344567766543 34432221 1111111 000
Q ss_pred ----ccCCCCC-----cc----cchhhhhcCCCCcceEEeecCCCCCC------CCC--C--------------------
Q 013811 252 ----KRVNPNL-----DI----GTDFVANNLIPGIDFATVHSYPDQWL------SSS--N-------------------- 290 (436)
Q Consensus 252 ----~~~np~~-----~~----g~df~~~~~~~~iD~~s~H~Y~~~w~------~~~--~-------------------- 290 (436)
....|.. .. ..+-........+||+++++|..... +.. .
T Consensus 277 d~~~~G~YP~~~~~~~~~~~p~~~~~~~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (484)
T d1v02a_ 277 EPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAI 356 (484)
T ss_dssp HHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCSTTCCCCSGGGGGCEEEESBCTTSCBS
T ss_pred HHHhCCCCCHHHHhhhhhcCcccchhhHHHhhcCCCccccccceeEEEeccCCCCCcccccccCccccccccccCCCccc
Confidence 0011200 00 00000011235789999999952110 000 0
Q ss_pred -hhHh---HHHHHHHHHHHHHHHHHhc-CCcEEEEecCCCCCCC-C------CChHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013811 291 -DRDQ---LSFLNNWLDTHIQDAEHIL-RKPILLAEFGKSRKDP-G------YSTYQRDVMFNTVYYKIYSSAKRGGAAA 358 (436)
Q Consensus 291 -~~~~---~~~~~~~i~~~~~~a~~~~-~kPv~i~EfG~~~~~~-g------~~~~~r~~~~~~~~~~i~~~~~~~~~~~ 358 (436)
.... ++...+-|...+....+.+ +.||+|+|.|+...+. . ..+..|.+|++..+..+.+++++|..+.
T Consensus 357 ~~~t~~~W~ei~P~GL~~~L~~~~~rY~~~PI~ITENG~a~~d~~~~~~~~~i~D~~Ri~yl~~hl~~v~~Ai~dGv~V~ 436 (484)
T d1v02a_ 357 GPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLGADVR 436 (484)
T ss_dssp SCBCSSSSCBCCTHHHHHHHHHHHHHSCCCCEEEEEECCCEECSSCCCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcCCCCceEChHHHHHHHHHHHHHcCCCCEEEeCCCCCCccccccCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 0000 0112233444454444446 4799999999986431 1 1267899999999999999999999999
Q ss_pred ceeecccccCCCCCCCCCceEE
Q 013811 359 GGLFWQLLTEGMDAFRDGYEIV 380 (436)
Q Consensus 359 G~~~W~~~~~g~~~~~dg~~i~ 380 (436)
|+++|++.|+. +|..||...
T Consensus 437 GY~~WSllDn~--EW~~Gy~~R 456 (484)
T d1v02a_ 437 GYFAWSLLDNF--EWSSGYTER 456 (484)
T ss_dssp EEEEECSBCCC--CGGGGGGEE
T ss_pred EEeecCcchhh--CccccccCC
Confidence 99999999984 577764433
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.80 E-value=7.9e-18 Score=162.93 Aligned_cols=151 Identities=17% Similarity=0.193 Sum_probs=110.8
Q ss_pred EEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHH
Q 013811 40 FLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAE 119 (436)
Q Consensus 40 f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~ 119 (436)
|.|||+|++++|+|++...... .+.+++.++++|+.||++|+|+||+|.... + .+ +.++++
T Consensus 18 f~lNG~p~~lrG~~~~~~~~~~-~~~~~e~~~~di~l~ke~G~N~IR~~~~~~--~---------p~-------~~f~d~ 78 (348)
T d2je8a5 18 FEVNGIPMFAKGANYIPQDALL-PNVTTERYQTLFRDMKEANMNMVRIWGGGT--Y---------EN-------NLFYDL 78 (348)
T ss_dssp EEETTEEECEEEEEECCSCSSG-GGCCHHHHHHHHHHHHHTTCCEEEECTTSC--C---------CC-------HHHHHH
T ss_pred EEECCEEEEEeeEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCCEEecCCCCC--C---------CC-------HHHHHH
Confidence 9999999999999965432221 234678999999999999999999975321 1 01 467899
Q ss_pred HHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEE
Q 013811 120 ARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAW 199 (436)
Q Consensus 120 a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~w 199 (436)
|.++||.|+.++...|. .+..++...+.+++.++.+|.| ++|||+|++|
T Consensus 79 cD~~GilV~~e~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~I~r--------~rNHPSIi~W 127 (348)
T d2je8a5 79 ADENGILVWQDFMFACT-----------------------PYPSDPTFLKRVEAEAVYNIRR--------LRNHASLAMW 127 (348)
T ss_dssp HHHHTCEEEEECSCBSS-----------------------CCCCCHHHHHHHHHHHHHHHHH--------HTTCTTEEEE
T ss_pred HHHCCCEEEeccchhcc-----------------------CCCCCHHHHHHHHHHHHHHHHH--------hcCCCeEEEE
Confidence 99999999998754321 1234688889999999999999 9999999999
Q ss_pred EeecCCCCC-------CCCChHHHHHH--------HHHHHHHhhccCCCCEEEeCC
Q 013811 200 ELMNEPRCT-------SDPSGRTIQAW--------ITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 200 eL~NEp~~~-------~~~~~~~~~~w--------~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
.++||+... ........... ...+...+++.+|++++...+
T Consensus 128 ~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
T d2je8a5 128 CGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSS 183 (348)
T ss_dssp ESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSB
T ss_pred eccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCceecCC
Confidence 999998531 11112222222 123467788899999998654
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.78 E-value=8.1e-19 Score=170.11 Aligned_cols=155 Identities=11% Similarity=0.057 Sum_probs=116.4
Q ss_pred EeeCCeEEECCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhH
Q 013811 34 RTRGSHFLLNGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGL 113 (436)
Q Consensus 34 ~v~g~~f~~nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~l 113 (436)
...|.+|.+||||++++|+|++..... ..+++.++++|+.||++|+|+||+|...+ +
T Consensus 8 ~~~g~~f~vNG~~~~~rG~~~~p~~~~---~~~~~~~~~~l~~~k~~G~N~iR~~~~~~-------------~------- 64 (339)
T d2vzsa5 8 SSGGRQYSVNGKPLLIRGGGYTPDLFL---RWNETAAADKLKYVLNLGLNTVRLEGHIE-------------P------- 64 (339)
T ss_dssp TTSCEEEEETTEEECEEEEECCCCTTC---CCCHHHHHHHHHHHHHTTCCEEEEESCCC-------------C-------
T ss_pred cCCCcEEEECCEEEEEeccccCCCcCC---CCCHHHHHHHHHHHHHcCCCEEEecCCCC-------------C-------
Confidence 344667999999999999997532221 23568899999999999999999975311 1
Q ss_pred HHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC
Q 013811 114 DFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD 193 (436)
Q Consensus 114 D~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~ 193 (436)
+.++++|.++||+|+..+...+.+.+.. . .....-..+|...+.+++.++.+|+| +++|
T Consensus 65 ~~f~d~~D~~Gi~V~~e~~~~~~w~~~~----------~---~~~~~~~~~p~~~~~~~~~~~~~v~r--------~rnH 123 (339)
T d2vzsa5 65 DEFFDIADDLGVLTMPGWECCDKWEGQV----------N---GEEKGEPWVESDYPIAKASMFSEAER--------LRDH 123 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCSSSGGGTTT----------S---TTSSSCCCCTTHHHHHHHHHHHHHHH--------HTTC
T ss_pred HHHHHHHHHCCCeEecccccCccccccC----------C---cccccCCCCHHHHHHHHHHHHHHHHH--------hcCC
Confidence 4688899999999998875443221100 0 01112234688889999999999999 9999
Q ss_pred CcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCC
Q 013811 194 PTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGL 240 (436)
Q Consensus 194 p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~ 240 (436)
|+|++|.+.||+... ..+.+.+.+.+|++||.++++..+
T Consensus 124 Psvi~W~~gNE~~~~--------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 124 PSVISFHIGSDFAPD--------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp TTBCCEESCSSSCCC--------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CcEEEEecCcCCCch--------HHHHHHHHHHHHHhCCCceeEecC
Confidence 999999999998764 345567778899999999998655
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.78 E-value=2.6e-18 Score=175.53 Aligned_cols=282 Identities=15% Similarity=0.169 Sum_probs=177.9
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC---CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS---PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~---pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
-+.+++|++.||++|+|+.|+- . .|++++|. +|.+|+++++.++++|+++.++||.++++|+++ +
T Consensus 72 y~~y~eDi~l~~~lG~~~yRfS-i---~WsRI~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~Hf-d------- 139 (490)
T d1cbga_ 72 YHRYKEDIGIMKDMNLDAYRFS-I---SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW-D------- 139 (490)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE-C---CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------
T ss_pred hhhhHHHHHHHHHcCCCEEEcc-C---CHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecC-C-------
Confidence 4789999999999999999983 2 48888886 689999999999999999999999999999874 2
Q ss_pred hhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC--------C----
Q 013811 144 YVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD--------P---- 211 (436)
Q Consensus 144 y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~--------~---- 211 (436)
.|.|....+ ..|.|++..+.|.+|++.++++ |++. |-.|...|||.+... +
T Consensus 140 lP~~l~~~~-------Ggw~n~~~~~~F~~Ya~~v~~~--------fgd~--V~~W~T~NEP~~~~~~gy~~G~~~pg~~ 202 (490)
T d1cbga_ 140 VPQALEDEY-------RGFLGRNIVDDFRDYAELCFKE--------FGDR--VKHWITLNEPWGVSMNAYAYGTFAPGRC 202 (490)
T ss_dssp CBHHHHHHH-------CGGGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCC
T ss_pred ChHHHhhcc-------cccCCHHHHHHHHHHHHHHHHH--------hcCc--cceEEEccCCceeeeccccccccccccc
Confidence 366765331 1378899999999999999999 9996 557999999964210 0
Q ss_pred ------------C-hHHHHHHHH------HHHHHhhcc---CCCCEEEe--CCCcccCCCC-Ccc---------------
Q 013811 212 ------------S-GRTIQAWIT------EMASYVKSI---DRNHLLEA--GLEGFYGQST-PQR--------------- 251 (436)
Q Consensus 212 ------------~-~~~~~~w~~------~~~~~Ir~~---Dp~~lV~v--G~~g~~~~~~-~~~--------------- 251 (436)
+ .+.++.... .+++.+|+. .++..|.+ ....++..+. +..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~a~h~~l~Aha~a~~~~r~~~~~~~~~~vg~~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~f 282 (490)
T d1cbga_ 203 SDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWF 282 (490)
T ss_dssp CGGGCSCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHH
T ss_pred cccccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeecccceecccCChHHHHHHHHHHHHhhccc
Confidence 0 122333322 234445542 33333322 1111111111 000
Q ss_pred -----ccCCCCC---------cccchhhhhcCCCCcceEEeecCCCCCC--------CCCChh-----------------
Q 013811 252 -----KRVNPNL---------DIGTDFVANNLIPGIDFATVHSYPDQWL--------SSSNDR----------------- 292 (436)
Q Consensus 252 -----~~~np~~---------~~g~df~~~~~~~~iD~~s~H~Y~~~w~--------~~~~~~----------------- 292 (436)
....|.. ....+-........+||+++++|..... ......
T Consensus 283 ~d~~~~G~yP~~~~~~~~~~~~~~~~e~~~~~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (490)
T d1cbga_ 283 MHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKPLG 362 (490)
T ss_dssp HHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCCTTCCCCHHHHTCEEEESEETTEESS
T ss_pred ccchhcCCCcHHHHHHHHhcCCccchhhhhhccCCcCcceecceeceEeecCCCCCCCCccccccccccccccccCCCCC
Confidence 0011100 0000000011245689999999953110 000000
Q ss_pred --HhH---HHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCC-C------CChHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013811 293 --DQL---SFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDP-G------YSTYQRDVMFNTVYYKIYSSAKRGGAAAG 359 (436)
Q Consensus 293 --~~~---~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~-g------~~~~~r~~~~~~~~~~i~~~~~~~~~~~G 359 (436)
... ....+-|...+....+.+++| |+|+|.|+..... . ..+..|.+|++..+..+.+++++|..+.|
T Consensus 363 ~~~~~~W~~i~P~Gl~~~L~~i~~~Y~~p~i~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv~v~G 442 (490)
T d1cbga_ 363 PMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIGDGVNVKG 442 (490)
T ss_dssp CBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEECCTTSCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CccCCCCceEChHHHHHHHHHHHHhcCCCcEEEecCCCCCcCCcccccCCccCChHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 000 011223444444444446666 8899999875321 0 12568999999999999999999999999
Q ss_pred eeecccccCCCCCCCCCceE
Q 013811 360 GLFWQLLTEGMDAFRDGYEI 379 (436)
Q Consensus 360 ~~~W~~~~~g~~~~~dg~~i 379 (436)
+++|++.|+- +|..||..
T Consensus 443 Y~~WSl~Dn~--EW~~G~~~ 460 (490)
T d1cbga_ 443 YFAWSLFDNM--EWDSGYTV 460 (490)
T ss_dssp EEESCSBCCC--CGGGTTSE
T ss_pred EeecChhHhh--Chhhcccc
Confidence 9999999984 57666433
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.78 E-value=2.5e-18 Score=167.02 Aligned_cols=240 Identities=18% Similarity=0.155 Sum_probs=151.6
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc--CCCCCCChhhhhhHHh
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN--NYDSFGGKKQYVNWAR 149 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~--~w~~~gg~~~y~~W~~ 149 (436)
..|+.||++|+|+||+-+. .+|.+|.++ ++.++++++.|+++||+|+|+||. .|.+.|
T Consensus 31 d~~~~lk~~G~n~VRlrvW-------~~p~~g~~~---~~~~~~~~~~a~~~Gm~vll~~hysd~Wadp~---------- 90 (334)
T d1foba_ 31 ALETILADAGINSIRQRVW-------VNPSDGSYD---LDYNLELAKRVKAAGMSLYLDLHLSDTWADPS---------- 90 (334)
T ss_dssp CHHHHHHHHTCCEEEEEEC-------SCCTTCTTC---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTT----------
T ss_pred cHHHHHHHcCCCEEEeeee-------eCCCCCcCc---HHHHHHHHHHHHHCCCEEEEEecCCCcccCCC----------
Confidence 4578899999999999542 345667666 889999999999999999999983 333211
Q ss_pred hcCCCCCCCCCC--CCChHHHHHHHHHHHHHHhccccccccccCCCCc-EEEEEeecCCCCCCC------CChHHHHHHH
Q 013811 150 SQGQFLTSDDDF--FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT-IMAWELMNEPRCTSD------PSGRTIQAWI 220 (436)
Q Consensus 150 ~~G~~~~~~~~f--~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~-I~~weL~NEp~~~~~------~~~~~~~~w~ 220 (436)
.+ ..+..+ .+-+...+.+.+|++.++++ ||+.+. +.+|+++|||+.... .+.+.+.+++
T Consensus 91 ---~q-~~P~aw~~~~~~~~~~~~~~~t~~v~~~--------~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll 158 (334)
T d1foba_ 91 ---DQ-TTPSGWSTTDLGTLKWQLYNYTLEVCNT--------FAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALL 158 (334)
T ss_dssp ---BC-BCCTTSCSSCHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHH
T ss_pred ---cC-CCcccccccccccHHHHHHHHHHHHHHH--------HHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHH
Confidence 10 001111 11256788899999999999 887743 568999999986532 2346788999
Q ss_pred HHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccch-hhhhcC--CCCcceEEeecCCCCCCCCCChhHhHHH
Q 013811 221 TEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTD-FVANNL--IPGIDFATVHSYPDQWLSSSNDRDQLSF 297 (436)
Q Consensus 221 ~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~d-f~~~~~--~~~iD~~s~H~Y~~~w~~~~~~~~~~~~ 297 (436)
+..+++||+.+|+.-+.+......+..... ...-.+ +..... ...+|++++|+||. |....+.. .
T Consensus 159 ~a~~~aVr~~~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~Dvig~syYp~-w~~~~~l~----~ 226 (334)
T d1foba_ 159 HSGAWGVKDSNLATTPKIMIHLDDGWSWDQ-------QNYFYETVLATGELLSTDFDYFGVSYYPF-YSASATLA----S 226 (334)
T ss_dssp HHHHHHHHTSCCSSCCEEEEEESCTTCHHH-------HHHHHHHHHHTSSSCGGGCCEEEEECCSS-SCTTCCHH----H
T ss_pred HHHHHHHHHhhcccccceeeecccCCChhh-------hHHHHHHHHhcCCCCCCCcCeEEEecCCC-CCCcccHH----H
Confidence 999999999987543222211111110000 000001 111111 12579999999997 44322221 1
Q ss_pred HHHHHHHHHHH-HHHhcCCcEEEEecCCCCCC-----------CC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeec
Q 013811 298 LNNWLDTHIQD-AEHILRKPILLAEFGKSRKD-----------PG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFW 363 (436)
Q Consensus 298 ~~~~i~~~~~~-a~~~~~kPv~i~EfG~~~~~-----------~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W 363 (436)
. .+.+.. +.+ ++|||+|.|+|.+... ++ .+++.|..|+..++..+.+. +.+.|.+||
T Consensus 227 l----~~~l~~l~~~-y~k~v~I~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~----~~G~G~~YW 297 (334)
T d1foba_ 227 L----KTSLANLQST-YDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEAT----TDGLGVYYW 297 (334)
T ss_dssp H----HHHHHHHHHH-HCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS----TTEEEEEEE
T ss_pred H----HHHHHHHHHH-hCCceEEEEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhc----CCceEEEEe
Confidence 2 222222 333 7999999999987432 11 35677888888887765332 246799999
Q ss_pred c
Q 013811 364 Q 364 (436)
Q Consensus 364 ~ 364 (436)
.
T Consensus 298 e 298 (334)
T d1foba_ 298 E 298 (334)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.77 E-value=1.5e-18 Score=177.67 Aligned_cols=281 Identities=16% Similarity=0.183 Sum_probs=176.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccC---CCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRS---PGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~---pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~ 143 (436)
.+.+++|++.||++|+|+.|+-+ .|++++|. +|.+|++.++.+|++|+++.++||..+++|+++ +
T Consensus 74 y~~y~eDi~l~~~lG~~~yRfSI----~WsRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf-d------- 141 (499)
T d1e4mm_ 74 FSYWQKDIDVLDELNATGYRFSI----AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHW-D------- 141 (499)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-C-------
T ss_pred HHHHHHHHHHHHHhCCCEEEccC----CHHHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecC-c-------
Confidence 57899999999999999999832 37788874 466899999999999999999999999999874 2
Q ss_pred hhhHHhhc-CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCC---------CC--
Q 013811 144 YVNWARSQ-GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTS---------DP-- 211 (436)
Q Consensus 144 y~~W~~~~-G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~---------~~-- 211 (436)
.|.|.... |. |.+++..+.|.+|++.++++ |++. |-.|...|||++.. .+
T Consensus 142 lP~~l~~~~GG--------W~~~~~~~~F~~YA~~v~~~--------fgd~--Vk~W~T~NEP~~~~~~gy~~G~~~pg~ 203 (499)
T d1e4mm_ 142 LPQTLQDEYEG--------FLDPQIIDDFKDYADLCFEE--------FGDS--VKYWLTINQLYSVPTRGYGSALDAPGR 203 (499)
T ss_dssp CBHHHHHHHCG--------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEESCTTHHHHHHHTSCSSTTCC
T ss_pred hHHHHHHhccc--------ccCHHHHHHHHHHHHHHHHh--------hccc--cceeEEccCceEEeecccccccccCcc
Confidence 36777543 42 88999999999999999999 9996 55899999998421 00
Q ss_pred --------------ChHHHHHHH------HHHHHHhhcc--CCCCEEEeCCC--cccCCCCC--cc--------------
Q 013811 212 --------------SGRTIQAWI------TEMASYVKSI--DRNHLLEAGLE--GFYGQSTP--QR-------------- 251 (436)
Q Consensus 212 --------------~~~~~~~w~------~~~~~~Ir~~--Dp~~lV~vG~~--g~~~~~~~--~~-------------- 251 (436)
..+.++.-. ..+.+.+|+. .+...|.+... .++..+.. ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~h~~llAha~a~~~~~~~~~~~~g~ig~~~~~~~~~p~~~~~~~~~~aa~~~~~~~~~~ 283 (499)
T d1e4mm_ 204 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGW 283 (499)
T ss_dssp CCTTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHSGGGCCEEECEEEEEEEEESSTTCHHHHHHHHHHHHHHTHH
T ss_pred cCccccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccccccccccCCCcchhHHHHHHHHHHhhhcc
Confidence 011222222 2334556553 33334432111 11111110 00
Q ss_pred ------ccCCCCCcccchhh-----------hhcCCCCcceEEeecCCCCC--------CCCC-----------------
Q 013811 252 ------KRVNPNLDIGTDFV-----------ANNLIPGIDFATVHSYPDQW--------LSSS----------------- 289 (436)
Q Consensus 252 ------~~~np~~~~g~df~-----------~~~~~~~iD~~s~H~Y~~~w--------~~~~----------------- 289 (436)
....|. ...+.. .......+||+++++|.... ....
T Consensus 284 ~~d~~~~g~Yp~--~~~~~~~~~l~~~~~~e~~l~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (499)
T d1e4mm_ 284 FMGPLTNGTYPQ--IMIDTVGERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 361 (499)
T ss_dssp HHHHHHHSSCCH--HHHHHHGGGSCCCCHHHHHHHTTCCSSEEEEEEEEEEEEECCCCTTSTTCCGGGGGCEEEESBCTT
T ss_pred hhhhhcCCcCch--hHHHHHHHhCCcccHHHHHHhcCCcCcceeeeeeeeEEecCCCcccccCcccccccCccccccCCC
Confidence 000110 000000 01123567999999993110 0000
Q ss_pred -------------ChhHhHHHHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCC-----CChHHHHHHHHHHHHHHHHH
Q 013811 290 -------------NDRDQLSFLNNWLDTHIQDAEHILRKP-ILLAEFGKSRKDPG-----YSTYQRDVMFNTVYYKIYSS 350 (436)
Q Consensus 290 -------------~~~~~~~~~~~~i~~~~~~a~~~~~kP-v~i~EfG~~~~~~g-----~~~~~r~~~~~~~~~~i~~~ 350 (436)
......+...+-|...+....+.++.| |+|+|.|+...+.- ..+..|..|++..+..+.++
T Consensus 362 g~~~~~~~~~~~~~~~~~w~i~P~Gl~~~L~~~~~~Y~~ppI~ITENG~a~~d~~~~~g~i~D~~Ri~Yl~~hL~~~~~A 441 (499)
T d1e4mm_ 362 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKV 441 (499)
T ss_dssp SCBCSSEEECCSSCGGGCEECCTHHHHHHHHHHHHHTTSCCEEEEECCCCEETTSCHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCccccCCCCcCCCCcEECHHHHHHHHHHHHHHhCCCcEEEECCCCCCCCCCCCCCcccCHHHHHHHHHHHHHHHHH
Confidence 000000011223444444444346655 99999999764311 13567999999999999998
Q ss_pred hh-cCCCccceeecccccCCCCCCCCCceEEe
Q 013811 351 AK-RGGAAAGGLFWQLLTEGMDAFRDGYEIVL 381 (436)
Q Consensus 351 ~~-~~~~~~G~~~W~~~~~g~~~~~dg~~i~~ 381 (436)
++ .|..+.|+++|++.|+- +|..||...+
T Consensus 442 i~~dGv~V~GY~~WSl~Dn~--EW~~Gy~~Rf 471 (499)
T d1e4mm_ 442 IKEKDVNVKGYLAWALGDNY--EFNKGFTVRF 471 (499)
T ss_dssp HHHHCCCEEEEEEECSBCCC--BTTTBTSEEC
T ss_pred HHhCCCCEEEeeecchhhhh--ChhhcccCcC
Confidence 86 57889999999999984 5877644333
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.77 E-value=7.1e-18 Score=171.51 Aligned_cols=277 Identities=15% Similarity=0.179 Sum_probs=171.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCC------------------------------CCChhhhhhHHHHH
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPG------------------------------SYNEQMFKGLDFVI 117 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg------------------------------~~~~~~l~~lD~~i 117 (436)
+.+++|++.|+++|+|+.|+- . .|++++|.++ .+|++.++.++.+|
T Consensus 60 ~~y~eDi~l~~~lG~~~yRfS-i---~WsRi~P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~i 135 (481)
T d1qvba_ 60 NLNQNDHDLAEKLGVNTIRVG-V---EWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMY 135 (481)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-C---CHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHcCCCEEEcc-C---cHHhcCcCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHHH
Confidence 567999999999999999983 2 3666766532 25899999999999
Q ss_pred HHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc------CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccC
Q 013811 118 AEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ------GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYK 191 (436)
Q Consensus 118 ~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~------G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk 191 (436)
+++.++||..+++|++. + .|.|.... |. .....=|.|++..+.|.+|++.+++| |+
T Consensus 136 ~~l~~~GI~P~VTL~H~-d-------lP~~L~d~~~~~~~g~--~~~~GGW~n~~~v~~F~~YA~~v~~~--------fg 197 (481)
T d1qvba_ 136 KDWVERGRKLILNLYHW-P-------LPLWLHNPIMVRRMGP--DRAPSGWLNEESVVEFAKYAAYIAWK--------MG 197 (481)
T ss_dssp HHHHTTTCEEEEESCCS-C-------CBTTTBCHHHHHHHCG--GGSCBGGGSTHHHHHHHHHHHHHHHH--------HT
T ss_pred HHHHHhCCeeEEEEecC-C-------CcHHHhhhhhcccccc--cccCCCccCHHHHHHHHHHHHHHHHH--------hc
Confidence 99999999999999873 3 24443210 00 00011278999999999999999999 99
Q ss_pred CCCcEEEEEeecCCCCCC----------CC----ChH-------HHHHHHHHHHHHhhccCCCCEEEeCCC-cccCCC-C
Q 013811 192 DDPTIMAWELMNEPRCTS----------DP----SGR-------TIQAWITEMASYVKSIDRNHLLEAGLE-GFYGQS-T 248 (436)
Q Consensus 192 ~~p~I~~weL~NEp~~~~----------~~----~~~-------~~~~w~~~~~~~Ir~~Dp~~lV~vG~~-g~~~~~-~ 248 (436)
+. |-.|...|||.+.. .+ +.. .+..-..++++.||+..+.. |.+-.. .++... .
T Consensus 198 dr--Vk~WiTiNEP~~~~~~gy~~~~G~~~Pg~~~~~~~~~a~~~~l~AHa~A~~~~~~~~~~~-igi~~~~~~~~~~~~ 274 (481)
T d1qvba_ 198 EL--PVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKP-VGLIYAFQWFELLEG 274 (481)
T ss_dssp TS--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSC-EEEEEECCEEECSSS
T ss_pred ch--hheeEecCCCcEEEeeccccccccCCCCccchhhHhHHHHHHHHHHHHHHHHHhhcccCc-cceEEecccccccCC
Confidence 86 55799999996421 11 111 11112234456678877653 222111 122111 1
Q ss_pred Cccc------cCCCCCc----cc-----chhhhhcCCCCcceEEeecCCCCCC------------------CC--CC--h
Q 013811 249 PQRK------RVNPNLD----IG-----TDFVANNLIPGIDFATVHSYPDQWL------------------SS--SN--D 291 (436)
Q Consensus 249 ~~~~------~~np~~~----~g-----~df~~~~~~~~iD~~s~H~Y~~~w~------------------~~--~~--~ 291 (436)
+... ...-.+. .| .++. ......+||+++++|..... +. .. .
T Consensus 275 ~~~~~~~~~~~~~~~f~d~~~~g~~~~~~~~~-~~i~~~~DfiGiNyYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (481)
T d1qvba_ 275 PAEVFDKFKSSKLYYFTDIVSKGSSIINVEYR-RDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAEN 353 (481)
T ss_dssp CCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCC-TTTSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSC
T ss_pred cHHHHHHHHHHhcccccchhhcCCcccCHHHH-HHhhccCCccccccccceEEeccCCCccccccccccccCCCcCCCCC
Confidence 1100 0000000 00 0011 12245689999999952110 00 00 0
Q ss_pred h-H--hHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 292 R-D--QLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 292 ~-~--~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
+ . ..+...+-|...+....+.+++||+|+|.|+... .+..|.+|++..+..+..++++|..+.|+++|++.|+
T Consensus 354 ~~t~~gw~i~P~Gl~~~L~~~~~~Y~~Pi~ITENG~~~~----~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dn 429 (481)
T d1qvba_ 354 PCSDFGWEVYPEGLYLLLKELYNRYGVDLIVTENGVSDS----RDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDN 429 (481)
T ss_dssp BBCTTCCBCCTHHHHHHHHHHHHHHCCEEEEEECCCCCT----TCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC
T ss_pred CCCccccccCcHHHHHHHHHHHHhcCCCEEEECCCCCcc----cChHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchhh
Confidence 0 0 0011122233444443334799999999999754 3457999999999999999999999999999999998
Q ss_pred CCCCCCCC
Q 013811 369 GMDAFRDG 376 (436)
Q Consensus 369 g~~~~~dg 376 (436)
. +|.+|
T Consensus 430 ~--EW~~G 435 (481)
T d1qvba_ 430 Y--EWAQG 435 (481)
T ss_dssp C--CGGGT
T ss_pred h--Chhhc
Confidence 4 46554
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.73 E-value=9.7e-17 Score=154.99 Aligned_cols=132 Identities=19% Similarity=0.265 Sum_probs=104.3
Q ss_pred EeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 50 NGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 50 ~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.|+++| ..+ ++++.+++||+.||++|+|+||++++ .|..++|+||.|+ ++.+|++|++|+++||++|+
T Consensus 2 ~~~~~~-p~~-----~~~~~~~~D~~~~~~~G~n~vR~~i~---~W~~iep~~G~~~---~~~~d~~i~~~~~~Gi~~iv 69 (393)
T d1kwga2 2 LGVCYY-PEH-----WPKERWKEDARRMREAGLSHVRIGEF---AWALLEPEPGRLE---WGWLDEAIATLAAEGLKVVL 69 (393)
T ss_dssp EEEECC-GGG-----SCHHHHHHHHHHHHHHTCCEEEECTT---CHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEE
T ss_pred cCcccC-ccc-----CCHHHHHHHHHHHHHcCCCEEEeccc---chhhcCCCCCccC---HHHHHHHHHHHHHCCCEEEE
Confidence 577763 332 25688999999999999999999764 3778899999998 78999999999999999999
Q ss_pred ecccCCCCCCChhhhhhHHhhcC----------CC---CCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcE
Q 013811 130 SLANNYDSFGGKKQYVNWARSQG----------QF---LTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTI 196 (436)
Q Consensus 130 ~l~~~w~~~gg~~~y~~W~~~~G----------~~---~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I 196 (436)
+|+.+. .|.|....+ .. .......+.+|..++.++++++.++.+ |+++|++
T Consensus 70 ~l~~~~--------~P~w~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 133 (393)
T d1kwga2 70 GTPTAT--------PPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAER--------YGGLEAV 133 (393)
T ss_dssp ECSTTS--------CCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHH--------HTTCTTE
T ss_pred EcCCCC--------CchhhhccCcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHH--------hcCCceE
Confidence 998652 134443311 00 011234467899999999999999999 9999999
Q ss_pred EEEEeecCCCCCC
Q 013811 197 MAWELMNEPRCTS 209 (436)
Q Consensus 197 ~~weL~NEp~~~~ 209 (436)
..|++.|||....
T Consensus 134 ~~~~~~ne~~~~~ 146 (393)
T d1kwga2 134 AGFQTDNEYGCHD 146 (393)
T ss_dssp EEEECSSSTTTTT
T ss_pred EEEeecccccccC
Confidence 9999999998753
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.73 E-value=7.6e-18 Score=162.75 Aligned_cols=277 Identities=14% Similarity=0.130 Sum_probs=158.5
Q ss_pred hhHHHHHHHH-HHCCCCEEEEcc-ccCCCC-----CCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCC
Q 013811 68 SKVSTAFHEA-ASHGLTVARTWA-FSDGGY-----RPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGG 140 (436)
Q Consensus 68 ~~~~~~l~~l-~~~G~N~vRi~~-~~d~~~-----~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg 140 (436)
.+.++.|..+ +++|++.||++. +.+... ...++.++.|| +..+|++++.|+++||++++.|....
T Consensus 20 ~d~~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd---~~~~D~~~~~~~~~g~~~~~~l~~~p----- 91 (346)
T d1uhva2 20 KEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYN---FTYIDRIFDSFLEIGIRPFVEIGFMP----- 91 (346)
T ss_dssp HHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEEC---CHHHHHHHHHHHHHTCEECEEECCCC-----
T ss_pred HHHHHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccC---hHhHHHHHHHHHHcCCCeEEEEeccC-----
Confidence 4566666655 679999999853 222110 01112223455 78899999999999999999985321
Q ss_pred hhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCC-----CCcEEEEEeecCCCCCCC---CC
Q 013811 141 KKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD-----DPTIMAWELMNEPRCTSD---PS 212 (436)
Q Consensus 141 ~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~-----~p~I~~weL~NEp~~~~~---~~ 212 (436)
.|.................|...+.+.++++.+++| |++ .+.|..||++|||+.... .+
T Consensus 92 -----~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~--------y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~ 158 (346)
T d1uhva2 92 -----KKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHH--------FISRYGIEEVLKWPFEIWNEPNLKEFWKDAD 158 (346)
T ss_dssp -----TTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHH--------HHHHHCHHHHTTCCEEESSCTTSTTTSGGGC
T ss_pred -----ccccCCCCCcccccccCCChhhHHHHHHHHHHHHHH--------HHhhcCcccccccccccccCcccccCCCCCC
Confidence 111100000001112234566678899999999999 764 356778999999986542 24
Q ss_pred hHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhh--hcCCCCcceEEeecCCCCCCCCCC
Q 013811 213 GRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA--NNLIPGIDFATVHSYPDQWLSSSN 290 (436)
Q Consensus 213 ~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~--~~~~~~iD~~s~H~Y~~~w~~~~~ 290 (436)
.+.+.++++.++++||+.||+..|..+.. ..... + + ..+|.. ......+|++++|.|+........
T Consensus 159 ~~~y~~~~~~~~~aik~~~P~~~v~~~~~--~~~~~-------~-~--~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~ 226 (346)
T d1uhva2 159 EKEYFKLYKVTAKAIKEVNENLKVGGPAI--CGGAD-------Y-W--IEDFLNFCYEENVPVDFVSRHAYTSKQGEYTP 226 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCEEEEEE--CTTCT-------H-H--HHHHHHHHHHHTCCCSEEEEEEECBCCCCCCS
T ss_pred HHHHHHHHHHHHHHHhccCCCceEeeccc--cCCcc-------c-c--HHHHHHHHHhcCCcccceeeecCCCCCCcCCc
Confidence 56788999999999999999988754321 11100 0 0 011211 112357999999999864332110
Q ss_pred --------hhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 291 --------DRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 291 --------~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
...........++..+.... ..++|++++|+|....... .....+..++...+. .. .. .+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pi~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~---~~-~~--~~~~~ 299 (346)
T d1uhva2 227 HLIYQEIMPSEYMLNEFKTVREIIKNSH-FPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILS---EG-GD--YVDSF 299 (346)
T ss_dssp SCCCCCBCCHHHHHHHHHHHHHHHHTSS-CTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHH---HG-GG--TCSEE
T ss_pred cchhhhhhhhhhHHHHHHHHHHHHHhcC-CCCccceeccccCCCCCCCCcccHHHHHHHHHHHHH---Hh-cc--cccEE
Confidence 01111111112222222111 1479999999998765322 122334445443332 22 22 46788
Q ss_pred eecccccCCC------CCCCCCceEEeCCC
Q 013811 361 LFWQLLTEGM------DAFRDGYEIVLSQS 384 (436)
Q Consensus 361 ~~W~~~~~g~------~~~~dg~~i~~~~d 384 (436)
.+|++.+... ...-++|+++..+.
T Consensus 300 ~~~~~~d~~~~~~~~~~~~~~~~Gll~~dg 329 (346)
T d1uhva2 300 SYWTFSDVFEERDVPRSQFHGGFGLVALNM 329 (346)
T ss_dssp EESCSBSCCCTTSSCCSSCSCCSCSEETTT
T ss_pred EEEEeeccccccCCCCCcccCCccccCCCC
Confidence 9999987421 11224677776543
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.73 E-value=2.6e-17 Score=158.92 Aligned_cols=245 Identities=15% Similarity=0.127 Sum_probs=148.7
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 150 (436)
+..|+.||++|+|+||+.+. .+|.+|.++ |+++|++++.|+++||+|||+||..-. |+..
T Consensus 30 ~~~~~~lk~~G~n~VRi~vW-------~~p~~g~~~---~~~~~~~v~~a~~~gl~vil~~h~~~~----------wa~~ 89 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQRVW-------VNPADGNYN---LDYNIAIAKRAKAAGLGVYIDFHYSDT----------WADP 89 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEEC-------SSCTTCTTS---HHHHHHHHHHHHHTTCEEEEEECCSSS----------CCBT
T ss_pred ccHHHHHHHcCCCEEEeeee-------ecCCCCccC---HHHHHHHHHHHHHCCCEEEEEecCCcc----------ccCc
Confidence 45788999999999999532 355677666 899999999999999999999985311 1111
Q ss_pred cCCCCCCCCCCC-CChHHHHHHHHHHHHHHhccccccccccCCCCc-EEEEEeecCCCCCCC------CChHHHHHHHHH
Q 013811 151 QGQFLTSDDDFF-RNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPT-IMAWELMNEPRCTSD------PSGRTIQAWITE 222 (436)
Q Consensus 151 ~G~~~~~~~~f~-~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~-I~~weL~NEp~~~~~------~~~~~~~~w~~~ 222 (436)
.+... +..+- +-+...+.+.++++.++++ ||+... +..|+++|||+.... ...+.+.++++.
T Consensus 90 ~~~~~--p~~~~~~~~~~~~~~~~~~~~v~~~--------~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~ 159 (332)
T d1hjsa_ 90 AHQTM--PAGWPSDIDNLSWKLYNYTLDAANK--------LQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHS 159 (332)
T ss_dssp TBCBC--CTTCCCSHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHH
T ss_pred cccCC--CcccccchhHHHHHHHHHHHHHHHH--------HHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHH
Confidence 11100 11111 1245678899999999999 876644 456899999975321 134678889999
Q ss_pred HHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC--CCCcceEEeecCCCCCCCCCChhHhHHHHHH
Q 013811 223 MASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL--IPGIDFATVHSYPDQWLSSSNDRDQLSFLNN 300 (436)
Q Consensus 223 ~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~--~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~ 300 (436)
++++||+.+++..+.+......+. .... ...+ -..+..... ...+|++++|.||. |....+.. ...
T Consensus 160 a~~av~~~~~~~~~~v~~~~~~~~-~~~~---~~~~--~~~~~~~~~~~~~~~D~ig~~~Y~~-~~~~~~~~----~~~- 227 (332)
T d1hjsa_ 160 AAWGIKDSSLSPKPKIMIHLDNGW-DWGT---QNWW--YTNVLKQGTLELSDFDMMGVSFYPF-YSSSATLS----ALK- 227 (332)
T ss_dssp HHHHHHTSCCSSCCEEEEEESCTT-CHHH---HHHH--HHHHHTTSSSCGGGCCEEEEECCSS-SCTTCCHH----HHH-
T ss_pred HHHHHHhhccCCCcceeecccCcC-chhh---hhhH--HHHHHhcCcccCCccceEeeeecCC-CCCCCCHH----HHH-
Confidence 999999977543222211111110 0000 0000 001111111 12479999999997 44332221 121
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCC-----------CC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecc
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKD-----------PG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQ 364 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~-----------~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~ 364 (436)
+.++...+..+||++|+|+|..... .+ .+.+.+.+|+..++..+.+ ...+.|.+||.
T Consensus 228 ---~~~~~~~~~~g~~v~i~E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~----~~~g~G~~yW~ 297 (332)
T d1hjsa_ 228 ---SSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSS----VSRGVGLFYWE 297 (332)
T ss_dssp ---HHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STTEEEEEEEC
T ss_pred ---HHHHHHHHHhCCceEEEEeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHh----cCCceEEEEec
Confidence 2222222237999999999986431 01 2567788888877766533 23567999994
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=99.57 E-value=7.8e-15 Score=141.08 Aligned_cols=237 Identities=14% Similarity=0.154 Sum_probs=150.4
Q ss_pred CCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCC
Q 013811 82 LTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161 (436)
Q Consensus 82 ~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f 161 (436)
+|.+=. -.+..|..+||.||.|| ++.+|.+++.|+++||+|...+.- |.. +.+.|.... -
T Consensus 38 fn~~t~--~n~~kW~~iep~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l~-w~~-----~~p~w~~~~---------~ 97 (320)
T d1xyza_ 38 FSMVVC--ENEMKFDALQPRQNVFD---FSKGDQLLAFAERNGMQMRGHTLI-WHN-----QNPSWLTNG---------N 97 (320)
T ss_dssp CSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTS---------C
T ss_pred CCeeee--cccCchHHhCCCCCccC---hHHHHHHHHHHHHCCCEEEeeccc-cCC-----CCCcchhcc---------c
Confidence 776643 12345778999999998 889999999999999998643211 211 234565321 1
Q ss_pred CCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC--ChH-----HHHHHHHHHHHHhhccCCCC
Q 013811 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP--SGR-----TIQAWITEMASYVKSIDRNH 234 (436)
Q Consensus 162 ~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~--~~~-----~~~~w~~~~~~~Ir~~Dp~~ 234 (436)
++.++..+.+.++++.+++| |++. |..|+++|||...... ... ....++..+.+.+|+.||+.
T Consensus 98 ~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a 167 (320)
T d1xyza_ 98 WNRDSLLAVMKNHITTVMTH--------YKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDA 167 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTS
T ss_pred cchHHHHHHHHHHHHHHHHH--------cCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCc
Confidence 33467788999999999999 9985 8899999999764321 111 11246788899999999998
Q ss_pred EEEeCCCcccCCCCCccccCCCCCcccchhhh--hcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 013811 235 LLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVA--NNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHI 312 (436)
Q Consensus 235 lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~--~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~ 312 (436)
.+.++..+.... .+.-..-..+.. ......+|.+++|.|..... . ... .+-+...++....
T Consensus 168 ~l~~n~~~~~~~--------~~~~~~~~~~~~~~~~~~~~id~iG~q~h~~~~~---~-~~~----~~~~~~~l~~~~~- 230 (320)
T d1xyza_ 168 LLFYNDYNIEDL--------GPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGM---S-PEY----LASIDQNIKRYAE- 230 (320)
T ss_dssp EEEEEESSCSSS--------SHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC---C-HHH----HHHHHHHHHHHHH-
T ss_pred EEEeeccccccc--------cHHHHHHHHHHHHHHhCcCccceEEecccccCCC---C-chH----HHHHHHHHHHHHh-
Confidence 877654221110 000000001111 12334689999988864321 1 111 1224444445554
Q ss_pred cCCcEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccCC
Q 013811 313 LRKPILLAEFGKSRKDPG---YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTEG 369 (436)
Q Consensus 313 ~~kPv~i~EfG~~~~~~g---~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~g 369 (436)
.+|||+|+|+|+.....+ .+++.++++++.++..+.+. +.+.|.++|.+.|..
T Consensus 231 ~g~pI~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~----p~v~gi~~W~~~D~~ 286 (320)
T d1xyza_ 231 IGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLAN----PNCNTFVMWGFTDKY 286 (320)
T ss_dssp TTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHC----TTEEEEEESCSBTTS
T ss_pred cCCceeeeccccccCCCCCchhHHHHHHHHHHHHHHHHHhC----CCeeEEEEeecccCC
Confidence 799999999998654322 23456778888777665553 467899999998863
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=99.56 E-value=4.8e-15 Score=143.05 Aligned_cols=234 Identities=14% Similarity=0.163 Sum_probs=149.5
Q ss_pred CCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCC
Q 013811 82 LTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161 (436)
Q Consensus 82 ~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f 161 (436)
+|.+=.- +...|..+||+||+|| +..+|.+++.|+++||+|.-... .|.. +.+.|... ..
T Consensus 39 fn~~t~~--n~~kW~~iEp~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l-~W~~-----~~p~~~~~---------~~ 98 (324)
T d1vbua1 39 FNILTPE--NQMKWDTIHPERDRYN---FTPAEKHVEFAEENDMIVHGHTL-VWHN-----QLPGWITG---------RE 98 (324)
T ss_dssp CSEEEES--STTSHHHHCCBTTEEE---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCHHHHT---------SC
T ss_pred cCccccc--cCCchHHhcCCCCccC---hHHHHHHHHHHHHCCCEEEEecC-cccc-----cCCccccc---------cc
Confidence 7777541 2234677899999998 88999999999999999864321 1322 12344321 11
Q ss_pred CCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch---HHHHHHHHHHHHHhhccCCCCE
Q 013811 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG---RTIQAWITEMASYVKSIDRNHL 235 (436)
Q Consensus 162 ~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~---~~~~~w~~~~~~~Ir~~Dp~~l 235 (436)
.+.+...+.+.++++.+++| |++. |.+|+++|||...... +. .....+++.+.+++|+.||+..
T Consensus 99 ~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~ 168 (324)
T d1vbua1 99 WTKEELLNVLEDHIKTVVSH--------FKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAI 168 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHH--------TTTT--CCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSE
T ss_pred cchHHHHHHHHHHHHHHHHh--------cCCC--ceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCE
Confidence 34467789999999999999 9984 6689999999653211 11 1123678889999999999998
Q ss_pred EEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhc
Q 013811 236 LEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHIL 313 (436)
Q Consensus 236 V~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~ 313 (436)
|.++..+.. .+ .+.-..-.+++.. .....+|.+++|.|...... +. + -+.+.++.... .
T Consensus 169 l~~n~~~~~---~~-----~~~~~~~~~~v~~l~~~~~~id~iG~q~h~~~~~~--~~----~----~~~~~l~~~~~-~ 229 (324)
T d1vbua1 169 LIYNDYSIE---EI-----NAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYRGL--NY----D----SFRRNLERFAK-L 229 (324)
T ss_dssp EEEEESSCS---SS-----SHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC--CH----H----HHHHHHHHHHT-T
T ss_pred EEEecCCCC---CC-----cHhHHHHHHHHHHHHhCCCCcceeEeeeccCcCCC--CH----H----HHHHHHHHHHh-c
Confidence 887642211 10 0000000011111 12345888888888643221 11 1 13344444444 8
Q ss_pred CCcEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 314 RKPILLAEFGKSRKDPG---YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 314 ~kPv~i~EfG~~~~~~g---~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
+|||+|+|+|+.....+ .+++.+++++..++..+.+ .+.+.|.++|.+.|.
T Consensus 230 g~pi~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~----~p~v~gi~~W~~~D~ 283 (324)
T d1vbua1 230 GLQIYITEMDVRIPLSGSEEYYLKKQAEVCAKIFDICLD----NPAVKAIQFWGFTDK 283 (324)
T ss_dssp TCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHT----STTEEEEEESCSBTT
T ss_pred CCceeeeeceeccCCCCCChHHHHHHHHHHHHHHHHHHh----cCCeEEEEEeccccC
Confidence 99999999998765432 2456788888888776544 346889999999875
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=99.51 E-value=2.2e-14 Score=137.03 Aligned_cols=227 Identities=17% Similarity=0.230 Sum_probs=145.6
Q ss_pred CCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCC
Q 013811 82 LTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161 (436)
Q Consensus 82 ~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f 161 (436)
+|.+-.. +...|..+||.||.|| ++.+|.+++.|+++||+|.--.. .|.. ..+.|. ..
T Consensus 37 fn~~t~~--n~~kW~~~ep~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l-~w~~-----~~p~w~-----------~~ 94 (302)
T d1nq6a_ 37 FGSVTPE--NEMKWDAVESSRNSFS---FSAADRIVSHAQSKGMKVRGHTL-VWHS-----QLPGWV-----------SP 94 (302)
T ss_dssp CSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEE-EEST-----TCCTTT-----------TT
T ss_pred CCeeeec--cCccchhhcCCCCcCC---cHHHHHHHHHHHHCCCEEEeecc-cccc-----cccccc-----------cc
Confidence 8888862 2234677899999999 88999999999999999863111 1221 123332 12
Q ss_pred CCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----ChHHH----HHHHHHHHHHhhccCCC
Q 013811 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----SGRTI----QAWITEMASYVKSIDRN 233 (436)
Q Consensus 162 ~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~~~~~----~~w~~~~~~~Ir~~Dp~ 233 (436)
+..+...+.++++++.+++| |++. |-.|+++|||...... ..... ..+++.+.+.+|+.||+
T Consensus 95 ~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~ 164 (302)
T d1nq6a_ 95 LAATDLRSAMNNHITQVMTH--------YKGK--IHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDAD 164 (302)
T ss_dssp SCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTT
T ss_pred cchHHHHHHHHHHHHHHHHH--------cCCC--cceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCC
Confidence 34567888999999999999 9985 8899999999654321 11111 24688899999999999
Q ss_pred CEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHH
Q 013811 234 HLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEH 311 (436)
Q Consensus 234 ~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~ 311 (436)
..+.++.-+.... +..-..-.+++.. .....+|.+++|.++....+. .+. +.+.++...+
T Consensus 165 a~l~~nd~~~~~~--------~~~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~~--~~~--------~~~~l~~~~~ 226 (302)
T d1nq6a_ 165 AKLCYNDYNTDGQ--------NAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSPV--PSD--------FQANLQRFAD 226 (302)
T ss_dssp SEEEEEESSCSSS--------SHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC--CTT--------HHHHHHHHHT
T ss_pred CceeecccccccC--------chhhHHHHHHHHHHHhccCCcceeEEEeccCCCCCC--hHH--------HHHHHHHHHh
Confidence 9888764221110 0000000011111 112347877777775432211 111 2233344444
Q ss_pred hcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 312 ILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 312 ~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.++||+|+|+++.. +++.+.++++.++..+.+. +.+.|.++|.+.|.
T Consensus 227 -~g~pi~iTE~d~~~-----~~~~Qa~~~~~~~~~~~~~----p~v~~i~~W~~~D~ 273 (302)
T d1nq6a_ 227 -LGVDVQITELDIEG-----SGSAQAANYTKVVNACLAV----TRCTGITVWGVTDK 273 (302)
T ss_dssp -TTCEEEEEEEEECC-----CHHHHHHHHHHHHHHHHTS----TTEEEEEESCSCGG
T ss_pred -cCCceEEecCCCCC-----CcHHHHHHHHHHHHHHHcc----CCceEEEEeCCccC
Confidence 89999999999864 4577888888888766543 46779999999875
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=99.50 E-value=2.1e-14 Score=137.79 Aligned_cols=233 Identities=14% Similarity=0.157 Sum_probs=146.7
Q ss_pred CCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDD 159 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 159 (436)
..+|.+-.- ++..|..++|.+|.|| ++.+|.+++.|+++||.|.--..- |.. +.+.|..
T Consensus 35 ~~fn~~t~~--n~~kW~~iep~~g~~~---~~~~D~~v~~a~~~gl~v~gh~lv-w~~-----~~p~~~~---------- 93 (312)
T d1fh9a_ 35 SEFNLVVAE--NAMKWDATEPSQNSFS---FGAGDRVASYAADTGKELYGHTLV-WHS-----QLPDWAK---------- 93 (312)
T ss_dssp HHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE-ESS-----SCCHHHH----------
T ss_pred HhCCccccc--ccCcchhhcCCCCcCC---cHHHHHHHHHHHHCCCEEEEeccc-ccc-----ccccccc----------
Confidence 358888751 2334777899999999 889999999999999998642211 321 2244542
Q ss_pred CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---ChHHH----HHHHHHHHHHhhccCC
Q 013811 160 DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SGRTI----QAWITEMASYVKSIDR 232 (436)
Q Consensus 160 ~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~~~~----~~w~~~~~~~Ir~~Dp 232 (436)
.++.++..+.+.++++.+++| |++. |..|+++|||...... ..... ..+++.+.+.+|+.||
T Consensus 94 -~~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP 162 (312)
T d1fh9a_ 94 -NLNGSAFESAMVNHVTKVADH--------FEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADP 162 (312)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHH--------TTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCS
T ss_pred -ccchHHHHHHHHHHHHHHHHh--------cCCC--ceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCC
Confidence 134467788999999999999 9985 8899999999754321 11111 2468889999999999
Q ss_pred CCEEEeCCCcccCCCCCccccCCCCCcccchhhhhc--CCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHH
Q 013811 233 NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANN--LIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAE 310 (436)
Q Consensus 233 ~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~ 310 (436)
+..+.++.-.. ... +.....-.+++..+ ..-.+|.+++|.++........ +.+.++...
T Consensus 163 ~a~l~~n~~~~---~~~-----~~~~~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~~~~-----------~~~~l~~~~ 223 (312)
T d1fh9a_ 163 TAKLCINDYNV---EGI-----NAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQVPGD-----------FRQNLQRFA 223 (312)
T ss_dssp SSEEEEEESSC---SSS-----SHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTCCCTT-----------HHHHHHHHH
T ss_pred CceEEeecCcc---ccc-----chhHHHHHHHHHHHHhCCCCccceeEeecccccCcHHH-----------HHHHHHHHH
Confidence 99887754221 110 00000000111111 1234777666655432221111 223333334
Q ss_pred HhcCCcEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 311 HILRKPILLAEFGKSRKDPG--YSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 311 ~~~~kPv~i~EfG~~~~~~g--~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
. .++||+|+|+|+...... .+++.++++++.++..+.+. +.+.|.++|.+.|.
T Consensus 224 ~-~g~pi~iTE~d~~~~~~~~~~~~~~QA~~~~~~~~~~~~~----~~v~~v~~W~~~D~ 278 (312)
T d1fh9a_ 224 D-LGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQV----TRCQGVTVWGITDK 278 (312)
T ss_dssp T-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTS----TTEEEEEESCSBTT
T ss_pred h-cCCceEEeccccccCCCCChhHHHHHHHHHHHHHHHHHhc----CCccEEEEeCCccC
Confidence 4 799999999998754322 23456777887777665443 46779999999875
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=99.50 E-value=1.2e-13 Score=133.42 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=150.8
Q ss_pred CCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCC
Q 013811 81 GLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDD 160 (436)
Q Consensus 81 G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 160 (436)
-+|.+=.- ++-.|..+||.||.|| ++.+|.+++.|+++||.|.--+.- |.. +.|.|+...+ ...
T Consensus 36 ~fn~~t~~--n~~kW~~iep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~lv-w~~-----~~P~W~~~~~-----~~~ 99 (330)
T d1n82a_ 36 HVNSITAE--NHMKFEHLQPEEGKFT---FQEADRIVDFACSHRMAVRGHTLV-WHN-----QTPDWVFQDG-----QGH 99 (330)
T ss_dssp HCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-ESS-----SCCGGGGBCS-----SSS
T ss_pred hcCccccc--cCCChHhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeecc-cCC-----CCCchhccCC-----cCC
Confidence 37766651 2234677899999999 888999999999999998643211 311 3467765321 123
Q ss_pred CCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC-----Ch---HHHHHHHHHHHHHhhccCC
Q 013811 161 FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP-----SG---RTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 161 f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~-----~~---~~~~~w~~~~~~~Ir~~Dp 232 (436)
..+.++..+.+.++++.+++| |++. |-.|+++|||...... +. .....+++.+.+++|+.||
T Consensus 100 ~~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P 169 (330)
T d1n82a_ 100 FVSRDVLLERMKCHISTVVRR--------YKGK--IYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADP 169 (330)
T ss_dssp BCCHHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHHHHHHHh--------cCCC--ceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCC
Confidence 344567889999999999999 9985 7799999999654321 11 1123577888899999999
Q ss_pred CCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHH
Q 013811 233 NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAE 310 (436)
Q Consensus 233 ~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~ 310 (436)
+..|.++.- +...+.. ...+ ..+... .....+|.+++|.|.....+ +. . -+.+.++...
T Consensus 170 ~a~l~~n~~---~~~~~~~---~~~~---~~~v~~l~~~g~~idgiG~q~h~~~~~~--~~----~----~i~~~l~~~~ 230 (330)
T d1n82a_ 170 DALLFYNDY---NECFPEK---REKI---FALVKSLRDKGIPIHGIGMQAHWSLTRP--SL----D----EIRAAIERYA 230 (330)
T ss_dssp TSEEEEEES---STTSHHH---HHHH---HHHHHHHHHTTCCCCEEEECCEEESSSS--CH----H----HHHHHHHHHH
T ss_pred cceEeeccc---ccccccc---hhhH---HHHHHHHHhCCCCcceEEEeecCccCcC--CH----H----HHHHHHHHHH
Confidence 988876532 2111000 0000 011111 22356899999888532211 11 1 1344455555
Q ss_pred HhcCCcEEEEecCCCCCCC--------CCC---hHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 311 HILRKPILLAEFGKSRKDP--------GYS---TYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 311 ~~~~kPv~i~EfG~~~~~~--------g~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
. +++||.++|+++..... ..+ .+.++++++.++..+.+. .+.+.|.++|.+.|.
T Consensus 231 ~-~g~~i~iTE~d~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~---~p~v~gi~~Wg~~D~ 295 (330)
T d1n82a_ 231 S-LGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEY---RDVIQSVTFWGIADD 295 (330)
T ss_dssp T-TTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEESCSBTT
T ss_pred h-cCCceeeccccccccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCeeEEEEecCccC
Confidence 4 89999999999864321 011 245778888887765553 135669999999874
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=99.39 E-value=5.7e-13 Score=127.01 Aligned_cols=226 Identities=15% Similarity=0.192 Sum_probs=141.5
Q ss_pred CCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDD 159 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 159 (436)
.-+|.+=. . ++-.|..++|.||.|| ++.+|.+++.|+++||.|.--+.- |.. +.+.|...
T Consensus 35 ~~fn~~t~-~-n~~kW~~~ep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~l~-w~~-----~~p~w~~~--------- 94 (302)
T d1v0la_ 35 REFNMVTA-E-NEMKIDATEPQRGQFN---FSSADRVYNWAVQNGKQVRGHTLA-WHS-----QQPGWMQS--------- 94 (302)
T ss_dssp HHCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHT---------
T ss_pred hhCCeeee-c-ccCchhhhCCCCCcCC---hHHHHHHHHHHHHCCCEEEEeccc-cch-----hccccccc---------
Confidence 34887743 1 2234667899999998 888999999999999998544321 321 23456432
Q ss_pred CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC----C---hHHHHHHHHHHHHHhhccCC
Q 013811 160 DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP----S---GRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 160 ~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~----~---~~~~~~w~~~~~~~Ir~~Dp 232 (436)
...+...+.+.++++.+++| |++. |-.|++.|||...... + .....+|++.+.+++|+.||
T Consensus 95 --~~~~~~~~~~~~~i~~~~~r--------y~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP 162 (302)
T d1v0la_ 95 --LSGSALRQAMIDHINGVMAH--------YKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADP 162 (302)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCT
T ss_pred --cCcHHHHHHHHHHHHHHHhh--------cCCC--ceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCC
Confidence 23456788899999999999 9884 7799999999643211 1 12244688999999999999
Q ss_pred CCEEEeCCCcccCCCCCccccCCCCC-cccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHH
Q 013811 233 NHLLEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDA 309 (436)
Q Consensus 233 ~~lV~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a 309 (436)
+..|.++.-+..+. ++.. ..-..++.. .....+|.+++|.+...-.+. .+. +.+.++..
T Consensus 163 ~a~l~~n~~~~~~~--------~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~--~~~--------~~~~l~~~ 224 (302)
T d1v0la_ 163 SAKLCYNDYNVENW--------TWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPY--NSN--------FRTTLQNF 224 (302)
T ss_dssp TSEEEEEESSCCST--------TSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC--CTT--------HHHHHHHH
T ss_pred CCEEeecCcccccC--------ChHHHHHHHHHHHHHHhCCCCccceEEeeccCCCCCC--HHH--------HHHHHHHH
Confidence 98887764221111 1100 000011111 123468988888775321111 111 22333333
Q ss_pred HHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 310 EHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 310 ~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.. .++||+|||++..... ..++..++..+++. +.+.|.++|.+.|.
T Consensus 225 ~~-~glpi~iTE~d~~~~q--------a~~~~~~~~~~~s~----~~v~gi~~Wg~~D~ 270 (302)
T d1v0la_ 225 AA-LGVDVAITELDIQGAP--------ASTYANVTNDCLAV----SRCLGITVWGVRDS 270 (302)
T ss_dssp HT-TTCEEEEEEEEETTCC--------HHHHHHHHHHHHTC----TTEEEEEESCSBGG
T ss_pred Hh-cCCceEEeeccCCCCC--------HHHHHHHHHHHHhh----hCCeEEEECCCccC
Confidence 43 8999999999997542 34445555444332 46789999998875
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=99.37 E-value=2.7e-12 Score=125.45 Aligned_cols=242 Identities=12% Similarity=0.112 Sum_probs=146.1
Q ss_pred CCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDD 159 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 159 (436)
..+|.|=. -++-.|..+||.+|.|| ++.+|.+++.|+++||+|.--..- |.. ..+.+.|....
T Consensus 45 ~~fn~~t~--eN~mKW~~iep~~G~~n---f~~~D~~v~~a~~~gi~v~GH~lv-W~~---~~~~~~~~~~~-------- 107 (364)
T d1us3a2 45 KHFNHLTA--GNIMKMSYMQPTEGNFN---FTNADAFVDWATENNMTVHGHALV-WHS---DYQVPNFMKNW-------- 107 (364)
T ss_dssp HHCSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-ECC---GGGSCHHHHTC--------
T ss_pred HhCCeeee--cccCChHHhcCCCCccC---cHHHHHHHHHHHHCCCEEEEeecC-CCc---ccCCccccccC--------
Confidence 44887754 12234667899999999 889999999999999998632111 211 11233454321
Q ss_pred CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC------ChHHH------HHHHHHHHHHh
Q 013811 160 DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP------SGRTI------QAWITEMASYV 227 (436)
Q Consensus 160 ~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~------~~~~~------~~w~~~~~~~I 227 (436)
..+.++..+.++++++.+++| |++...|-+|++.|||...... ...-+ ..++..+.+.+
T Consensus 108 -~~~~~~~~~~~~~~I~~vv~r--------y~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~A 178 (364)
T d1us3a2 108 -AGSAEDFLAALDTHITTIVDH--------YEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTA 178 (364)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHH--------HHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHh--------hccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHH
Confidence 123456788899999999999 9977789999999999643211 01111 22677888899
Q ss_pred hccCCCCEEEeCCCcccCCCCCccccCCCCC-cccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHH
Q 013811 228 KSIDRNHLLEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304 (436)
Q Consensus 228 r~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~ 304 (436)
|+.||+..+.++.- +... .+.- .....+... ...-.+|.+++|.++..-.+ +. . -+.+
T Consensus 179 r~~~p~a~l~~ndy---~~~~------~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p--~~----~----~i~~ 239 (364)
T d1us3a2 179 RAADPAVILYYNDY---NIEQ------NNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYP--SI----A----NISA 239 (364)
T ss_dssp HHHCTTSEEEEEES---STTS------CSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS--CH----H----HHHH
T ss_pred HHhccccceeeccc---cccc------cchhhhHHHHHHHHHHhCCCccccceeeeeccCCCC--CH----H----HHHH
Confidence 99999987766531 1111 0000 000011111 12345888888666421111 11 1 1344
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCCC-----------C---ChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 305 HIQDAEHILRKPILLAEFGKSRKDPG-----------Y---STYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 305 ~~~~a~~~~~kPv~i~EfG~~~~~~g-----------~---~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.++.... .++||.|+|+++...... . ....++++|..++..+.+.... ..+.|.++|.+.|.
T Consensus 240 ~l~~~~~-~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~-~~~~~vt~Wg~~D~ 315 (364)
T d1us3a2 240 AMKKVVD-LGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPV-NQRGGISVWGTTDA 315 (364)
T ss_dssp HHHHHHT-TTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCG-GGEEEEEESCSBGG
T ss_pred HHHHHHh-cCCeeEEEeeeEecccCccccccccccCCCChHHHHHHHHHHHHHHHHHHhcccc-cccceEEEecCCcC
Confidence 4555454 899999999998654211 0 1245677888888776655321 13458889998874
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=99.22 E-value=4.5e-11 Score=113.58 Aligned_cols=225 Identities=14% Similarity=0.154 Sum_probs=138.9
Q ss_pred CCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCC
Q 013811 82 LTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161 (436)
Q Consensus 82 ~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f 161 (436)
+|.+=. -++..|..+||.||.|| ++.+|++++.|+++||.|.-...- |.. +.|.|....
T Consensus 37 fn~~t~--en~~kW~~iEp~~G~~~---~~~~D~~v~~a~~~gl~v~gH~lv-W~~-----~~P~w~~~~---------- 95 (301)
T d1ta3b_ 37 FGVITP--ENSMKWDALEPSQGNFG---WSGADYLVDYATQHNKKVRGHTLV-WHS-----QLPSWVSSI---------- 95 (301)
T ss_dssp CSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTC----------
T ss_pred CCeecc--cccCcchhhCCCCCcCC---cHHHHHHHHHHHHCCCEEEEeccc-cCc-----cCchhhhcc----------
Confidence 787653 12335778899999999 888999999999999998653221 421 346776431
Q ss_pred CCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch---HHHHHHHHHHHHHhhccCCCCE
Q 013811 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG---RTIQAWITEMASYVKSIDRNHL 235 (436)
Q Consensus 162 ~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~---~~~~~w~~~~~~~Ir~~Dp~~l 235 (436)
.+.+...+.++++++.+++| |++. |-.|++.|||-..... +. ..-.++++.+.+.+|+.||+..
T Consensus 96 ~~~~~~~~~~~~~I~~v~~r--------Y~g~--i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~ 165 (301)
T d1ta3b_ 96 GDANTLRSVMTNHINEVVGR--------YKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAK 165 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSE
T ss_pred ccHHHHHHHHHHHHHHHHHh--------cCCC--cceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCce
Confidence 23356678899999999999 9884 7899999999543211 11 1112578888899999999987
Q ss_pred EEeCCCcccCCCCCccccCCCCC-cccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 013811 236 LEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHI 312 (436)
Q Consensus 236 V~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~ 312 (436)
+.+...+.... ++.. .....++.. .....+|.+++|.....-.+ +.+. +.+.++...+
T Consensus 166 l~~nd~~~~~~--------~~~~~~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~~--~~~~--------~~~~l~~~~~- 226 (301)
T d1ta3b_ 166 LYINDYNLDSA--------SYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHW--SSTE--------AAGALSSLAN- 226 (301)
T ss_dssp EEEEESCCCCT--------TSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCC--CGGG--------HHHHHHHHHT-
T ss_pred eeecccccccc--------chHHHHHHHHHHHHHHhCCCCcceeeeeeecCCCCC--CHHH--------HHHHHHHHHH-
Confidence 76654222111 0000 000111111 12356888888876432111 1111 1122223333
Q ss_pred cCC-cEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 313 LRK-PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 313 ~~k-Pv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
++. ||.|+|+++... +.+.+..++..+++ .+.+.|.++|.+.|.
T Consensus 227 ~g~~~i~iTE~dv~~~--------qa~~~~~~~~~~~~----~p~v~gi~~Wg~~D~ 271 (301)
T d1ta3b_ 227 TGVSEVAITELDIAGA--------ASSDYLNLLNACLN----EQKCVGITVWGVSDK 271 (301)
T ss_dssp TCCSEEEEEEEEETTC--------CHHHHHHHHHHHHT----CTTEEEEEESCSBGG
T ss_pred cCCCcccccccccchH--------HHHHHHHHHHHHHc----ccCceEEEEcCCccC
Confidence 675 699999998754 23445556655444 246889999999875
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=99.13 E-value=4e-11 Score=113.98 Aligned_cols=223 Identities=17% Similarity=0.179 Sum_probs=136.8
Q ss_pred CCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCC
Q 013811 82 LTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDF 161 (436)
Q Consensus 82 ~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f 161 (436)
+|.+=. -++..|..+||.+|.|+ ++.+|.+++.|+++||.+.--.. .|.. +.|.|....
T Consensus 40 fn~~t~--eN~~KW~~~ep~~G~~~---~~~~D~~v~~a~~~gi~vrGH~l-vW~~-----~~P~W~~~~---------- 98 (303)
T d1i1wa_ 40 FGQVTP--ENSMKWDATEPSQGNFN---FAGADYLVNWAQQNGKLIRGHTL-VWHS-----QLPSWVSSI---------- 98 (303)
T ss_dssp CSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEE-ECST-----TCCHHHHTC----------
T ss_pred CCcccc--cccCcchhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeee-eecC-----cCchhhhcc----------
Confidence 776654 12334677899999998 89999999999999999742111 1421 346776421
Q ss_pred CCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--HH-HHHHHHHHHHHhhccCCCCE
Q 013811 162 FRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--RT-IQAWITEMASYVKSIDRNHL 235 (436)
Q Consensus 162 ~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~~-~~~w~~~~~~~Ir~~Dp~~l 235 (436)
.+.+...+.++++++.+++| |++. |-.|++.|||...... +. +. -.++++.+.+.+|+.||+..
T Consensus 99 ~~~~~~~~~~~~~i~~v~~r--------Y~g~--i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~ 168 (303)
T d1i1wa_ 99 TDKNTLTNVMKNHITTLMTR--------YKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAK 168 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSE
T ss_pred cccHHHHHHHHHHHHHHHHH--------cCCC--CchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCE
Confidence 12244677889999999999 9885 7899999999653211 10 11 12467888899999999998
Q ss_pred EEeCCCcccCCCCCccccCCCCC-cccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 013811 236 LEAGLEGFYGQSTPQRKRVNPNL-DIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHI 312 (436)
Q Consensus 236 V~vG~~g~~~~~~~~~~~~np~~-~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~ 312 (436)
+.++.- +...+ ++.- ..-..++.. .....||.+++|.+... . .... ..+...+.+ .
T Consensus 169 L~~Ndy---~~~~~-----~~~k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~---~-~~~~-------~~~~~~~~~-~- 227 (303)
T d1i1wa_ 169 LYINDY---NLDSA-----SYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSA---G-QGAS-------VLQALPLLA-S- 227 (303)
T ss_dssp EEEEES---SCCCS-----SSHHHHHHHHHHHHHHHTTCCCCEEEECCEECT---T-THHH-------HHHHHHHHH-T-
T ss_pred EEeecC---cccCC-----cHHHHHHHHHHHHHHHhCCCCccceEeeeccCC---C-CcHH-------HHHHHHHHH-H-
Confidence 887642 22111 1100 000011111 12346899999887432 1 1111 111222222 2
Q ss_pred cCC-cEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 313 LRK-PILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 313 ~~k-Pv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.+. ||.|+|+.+.... .+.++.++..+++. +.+.|.++|.+.|.
T Consensus 228 ~g~~~i~iTElDi~~~q--------a~~y~~~~~~~~~~----p~v~git~Wg~~D~ 272 (303)
T d1i1wa_ 228 AGTPEVAITELDVAGAS--------STDYVNVVNACLNV----SSCVGITVWGVADP 272 (303)
T ss_dssp TCCSEEEEEEEEETTCC--------HHHHHHHHHHHHHC----TTEEEEEESCSBGG
T ss_pred cCCCceeeccccccccc--------HHHHHHHHHHHhcc----CCceEEEEeCCccC
Confidence 454 7999999987542 34455566555443 46889999999875
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.12 E-value=3.8e-10 Score=109.15 Aligned_cols=238 Identities=14% Similarity=0.186 Sum_probs=142.3
Q ss_pred HCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhcCCCCCC
Q 013811 79 SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQGQFLTS 157 (436)
Q Consensus 79 ~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~ 157 (436)
..-+|.+=. -++-.|..+++.+|.|+ ++..|.+++.|+++||.|-- +|. |.. +.+.|.... .
T Consensus 33 ~~~Fn~~t~--eN~~KW~~ie~~~G~~~---~~~~D~~v~~a~~~gi~vrGH~Lv--W~~-----~~P~w~~~~-----~ 95 (350)
T d1ur1a_ 33 AKEFNSITP--ENCMKWGVLRDAQGQWN---WKDADAFVAFGTKHNLHMVGHTLV--WHS-----QIHDEVFKN-----A 95 (350)
T ss_dssp HHHCSEEEE--SSTTSHHHHBCTTCCBC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SSCGGGTBC-----T
T ss_pred HHHcCeecc--cccCchhhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEEEEE--Ecc-----ccccccccc-----C
Confidence 345887743 12334667899999999 88999999999999999742 221 321 235554221 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch--H-HHHHHHHHHHHHhhccC
Q 013811 158 DDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG--R-TIQAWITEMASYVKSID 231 (436)
Q Consensus 158 ~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~--~-~~~~w~~~~~~~Ir~~D 231 (436)
....++.++..+.+.++++.+++| |++. |.+|++.|||-..... +. + .-..++..+.+..|+.|
T Consensus 96 ~~~~~~~~~l~~~~~~~I~~v~~r--------y~g~--i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~d 165 (350)
T d1ur1a_ 96 DGSYISKAALQKKMEEHITTLAGR--------YKGK--LAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVD 165 (350)
T ss_dssp TSCBCCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHC
T ss_pred CccccCHHHHHHHHHHHHHHHHHh--------cCCc--ceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhC
Confidence 122344456788999999999999 9874 7799999999643211 10 1 11346778889999999
Q ss_pred CCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEe--ecCCCCCCCCCChhHhHHHHHHHHHHHHH
Q 013811 232 RNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATV--HSYPDQWLSSSNDRDQLSFLNNWLDTHIQ 307 (436)
Q Consensus 232 p~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~ 307 (436)
|+..+.+.. |+...+.. ...+ ..++.. ...-.||-+++ |+..+.. +.+ -+.+.++
T Consensus 166 P~akL~~Nd---yn~~~~~k---~~~~---~~lv~~l~~~GvpiDgIGlQ~H~~~~~~----~~~--------~i~~~l~ 224 (350)
T d1ur1a_ 166 PKAHLMYND---YNIERTGK---REAT---VEMIERLQKRGMPIHGLGIQGHLGIDTP----PIA--------EIEKSII 224 (350)
T ss_dssp TTSEEEEEE---SSTTSTTH---HHHH---HHHHHHHHHTTCCCCEEEECCEEESSCS----CHH--------HHHHHHH
T ss_pred CCceEeecc---cccccccc---cHHH---HHHHHHHHhCCCCceEEEEeeeccCCCC----CHH--------HHHHHHH
Confidence 998766532 22111100 0000 011111 12234787777 8765432 111 1344454
Q ss_pred HHHHhcCCcEEEEecCCCCCCC------------------------CCC---hHHHHHHHHHHHHHHHHHhhcCCCccce
Q 013811 308 DAEHILRKPILLAEFGKSRKDP------------------------GYS---TYQRDVMFNTVYYKIYSSAKRGGAAAGG 360 (436)
Q Consensus 308 ~a~~~~~kPv~i~EfG~~~~~~------------------------g~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~ 360 (436)
...+ +++||.|+|+.+..... +.+ .+.+++.|+.++..+.+. ...+.|.
T Consensus 225 ~~~~-lg~~i~iTElDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~qA~~y~~~~~~~~~~---~~~v~~i 300 (350)
T d1ur1a_ 225 AFAK-LGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKH---SDKIDRA 300 (350)
T ss_dssp HHHT-TTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEE
T ss_pred HHHh-cCCceeecccceeccccccccccccccchhhcccccCccccCCcHHHHHHHHHHHHHHHHHHHhc---CCCeeEE
Confidence 5454 89999999998743210 001 123556666666655443 1246799
Q ss_pred eecccccC
Q 013811 361 LFWQLLTE 368 (436)
Q Consensus 361 ~~W~~~~~ 368 (436)
++|.+.|.
T Consensus 301 t~Wg~~D~ 308 (350)
T d1ur1a_ 301 TFWGVSDD 308 (350)
T ss_dssp EESCSBGG
T ss_pred EEECCccC
Confidence 99999985
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=99.01 E-value=2.5e-09 Score=104.06 Aligned_cols=243 Identities=16% Similarity=0.180 Sum_probs=139.3
Q ss_pred CCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhc--CCCCCC
Q 013811 81 GLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQ--GQFLTS 157 (436)
Q Consensus 81 G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~--G~~~~~ 157 (436)
-+|.+=. -++-.|..+|+.+|.|| ++..|.+|+.|+++||+|.- +|. |.. +.|.|.... |.+...
T Consensus 43 ~Fn~~t~--eN~mKW~~iep~~G~~n---~~~aD~~v~~a~~ngi~vrGH~Lv--W~~-----~~P~W~~~~~~~~~~~~ 110 (371)
T d1r85a_ 43 HFNSIVA--ENVMKPISIQPEEGKFN---FEQADRIVKFAKANGMDIRFHTLV--WHS-----QVPQWFFLDKEGKPMVN 110 (371)
T ss_dssp HCSEEEE--SSTTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEECSC--CST-----TCCGGGGBCTTSSBGGG
T ss_pred hcCeecc--cccCcchhhcCCCCccC---cHHHHHHHHHHHHCCCEEEEeEEE--eec-----ccccccccccccccccc
Confidence 4888743 12334677899999999 88999999999999999854 332 421 345665321 111100
Q ss_pred CCC----CCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC---Ch---HHHHHHHHHHHHHh
Q 013811 158 DDD----FFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP---SG---RTIQAWITEMASYV 227 (436)
Q Consensus 158 ~~~----f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~---~~---~~~~~w~~~~~~~I 227 (436)
... ..+.+++.+..+++++.+++| |++ .|-+|++.|||-..... +. ..-..++..+.+.+
T Consensus 111 ~~~~~~~~~~~e~l~~~~~~~I~~v~~r--------Y~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A 180 (371)
T d1r85a_ 111 ETDPVKREQNKQLLLKRLETHIKTIVER--------YKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAA 180 (371)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHH
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHH--------cCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHH
Confidence 000 012234677889999999999 988 48899999999543211 10 11135677888888
Q ss_pred hcc-CCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHH
Q 013811 228 KSI-DRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDT 304 (436)
Q Consensus 228 r~~-Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~ 304 (436)
|+. ||+..+.+.. |+...+.. ...+ ..++.. ...-.||-++++.......+ +. . -|.+
T Consensus 181 ~~~~~p~~~L~~Nd---y~~~~~~k---~~~~---~~~v~~l~~~g~pidgIG~Q~H~~~~~~--~~----~----~i~~ 241 (371)
T d1r85a_ 181 RKYGGDNIKLYMND---YNTEVEPK---RTAL---YNLVKQLKEEGVPIDGIGHQSHIQIGWP--SE----A----EIEK 241 (371)
T ss_dssp HHHHCTTSEEEEEE---SCTTSTTH---HHHH---HHHHHHHHHTTCCCCEEEECCEECSSSS--CH----H----HHHH
T ss_pred HHhcCCcceeeecc---ccccccch---hHHH---HHHHHHHHHCCCCcceeeccccccCCCC--CH----H----HHHH
Confidence 886 6775554422 12111100 0000 011111 12234787777443221111 11 1 2344
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCCC---------CC---hHHHHHHHHHHHHHHHHHhhcCCCccceeecccccC
Q 013811 305 HIQDAEHILRKPILLAEFGKSRKDPG---------YS---TYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLTE 368 (436)
Q Consensus 305 ~~~~a~~~~~kPv~i~EfG~~~~~~g---------~~---~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~~ 368 (436)
.++...+ +++||.|||+.+...... .+ ...++++|+.++..+.+. .+.+.|.++|.+.|.
T Consensus 242 ~l~~~a~-~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~---~p~v~git~WG~~D~ 313 (371)
T d1r85a_ 242 TINMFAA-LGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKL---SDKISNVTFWGIADN 313 (371)
T ss_dssp HHHHHHH-TTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHT---GGGEEEEEESSSSTT
T ss_pred HHHHHHH-cCCceEEeeeEeccCCCccccCcccccccHHHHHHHHHHHHHHHHHHHhc---CCCeeEEEEeCCCCC
Confidence 4555555 899999999987643210 01 134567777777655543 124679999999885
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.61 E-value=1.1e-07 Score=91.33 Aligned_cols=234 Identities=15% Similarity=0.181 Sum_probs=135.7
Q ss_pred CCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE-ecccCCCCCCChhhhhhHHhhcCCCCCCC
Q 013811 80 HGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL-SLANNYDSFGGKKQYVNWARSQGQFLTSD 158 (436)
Q Consensus 80 ~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~ 158 (436)
.-+|.|=. . .+-.|..++++ |.|| ++..|.+++.|+++||.|.- +|. |.. ..+.|.|...
T Consensus 35 ~~Fn~~t~-e-N~~Kw~~~~~~-g~~n---~~~~D~~v~~a~~ng~~vrGH~Lv--W~~---~~~~P~w~~~-------- 95 (346)
T d1w32a_ 35 AEFNQITA-E-NIMKMSYMYSG-SNFS---FTNSDRLVSWAAQNGQTVHGHALV--WHP---SYQLPNWASD-------- 95 (346)
T ss_dssp HHCSEEEE-S-STTSGGGGEET-TEEC---CHHHHHHHHHHHHTTCEEEEEEEE--CCC---GGGCCTTCST--------
T ss_pred HhCCeecc-c-ccCCceeecCC-CCCC---chHHHHHHHHHHHCCCEEEEEeee--cCC---cccCcccccC--------
Confidence 44777753 1 22335567764 6777 88899999999999999854 232 311 1133555321
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCC------------ChHH-----HHHHHH
Q 013811 159 DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDP------------SGRT-----IQAWIT 221 (436)
Q Consensus 159 ~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~------------~~~~-----~~~w~~ 221 (436)
.+++.++.++++++.+++| |++. |-+|++.|||-..... ...- -..+++
T Consensus 96 ----~~~~~~~~~~~~I~~v~~r--------y~g~--i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~ 161 (346)
T d1w32a_ 96 ----SNANFRQDFARHIDTVAAH--------FAGQ--VKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYID 161 (346)
T ss_dssp ----TCTTHHHHHHHHHHHHHHH--------TTTT--CSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHH
T ss_pred ----CcHHHHHHHHHHHHHHHHh--------hCCc--ceEEEEEeeeccccccCccccccccccccchhhhhccChHHHH
Confidence 2356788899999999999 9984 7899999999753210 0000 125788
Q ss_pred HHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhh--cCCCCcceEEeecC--CCCCCCCCChhHhHHH
Q 013811 222 EMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVAN--NLIPGIDFATVHSY--PDQWLSSSNDRDQLSF 297 (436)
Q Consensus 222 ~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~--~~~~~iD~~s~H~Y--~~~w~~~~~~~~~~~~ 297 (436)
.+.+..|+.||+..+.+.. |+...+.. ....+ ..++.. ...-.||-++++.- ... .+. ..
T Consensus 162 ~aF~~Ar~~dP~a~L~~Nd---yn~~~~~~--k~~~~---~~lv~~L~~~g~pIDgIG~Q~H~~~~~----p~~----~~ 225 (346)
T d1w32a_ 162 EAFRRARAADPTAELYYND---FNTEENGA--KTTAL---VNLVQRLLNNGVPIDGVGFQMHVMNDY----PSI----AN 225 (346)
T ss_dssp HHHHHHHHHCTTSEEEEEE---SSTTSCSH--HHHHH---HHHHHHHHHTTCCCCEEEECCEEESSS----SCH----HH
T ss_pred HHHHHHHHhCCCCEEEecc---CCcccCcH--HHHHH---HHHHHHHHhcCCccceEEEEeeccCCC----CCH----HH
Confidence 8899999999998776543 22111000 00000 011111 12234787666433 221 111 11
Q ss_pred HHHHHHHHHHHHHHhcC--CcEEEEecCCCCCCC------------------CCChHHHHHHHHHHHHHHHHHhhcCCCc
Q 013811 298 LNNWLDTHIQDAEHILR--KPILLAEFGKSRKDP------------------GYSTYQRDVMFNTVYYKIYSSAKRGGAA 357 (436)
Q Consensus 298 ~~~~i~~~~~~a~~~~~--kPv~i~EfG~~~~~~------------------g~~~~~r~~~~~~~~~~i~~~~~~~~~~ 357 (436)
+.+.++.... ++ .||.|||+-+..... ....+.++++|+.++....+.. ..+.+
T Consensus 226 ----~~~~l~~~~~-~g~~l~v~ITElDV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Qa~~y~~i~~~~~~~~-~~~~~ 299 (346)
T d1w32a_ 226 ----IRQAMQKIVA-LSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVV-PPGRR 299 (346)
T ss_dssp ----HHHHHHHHHT-TCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHHS-CTTCE
T ss_pred ----HHHHHHHHHH-hCCCceEEEEEEEeecCCcccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHhc-cCccc
Confidence 2333333333 55 789999997543210 0012456677887877665532 23467
Q ss_pred cceeecccccC
Q 013811 358 AGGLFWQLLTE 368 (436)
Q Consensus 358 ~G~~~W~~~~~ 368 (436)
.|.++|.+.|.
T Consensus 300 ~git~Wg~~D~ 310 (346)
T d1w32a_ 300 GGITVWGIADP 310 (346)
T ss_dssp EEEEESCSBGG
T ss_pred cEEEEeCCCcC
Confidence 79999999885
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.50 E-value=2.8e-06 Score=78.72 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=118.3
Q ss_pred HCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCC
Q 013811 79 SHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSD 158 (436)
Q Consensus 79 ~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~ 158 (436)
.+|++.+|+.+- ++...+...-.++.+|.++|++++.+. |.. |.|++..|...
T Consensus 31 g~g~s~~R~~id--------------~~~~~~~~~i~~~k~A~~~~~ki~~sp---WSp-------P~wMK~n~~~~--- 83 (277)
T d1nofa2 31 QIGLSIMRVRID--------------PDSSKWNIQLPSARQAVSLGAKIMATP---WSP-------PAYMKSNNSLI--- 83 (277)
T ss_dssp CCCCCEEEEECC--------------SSGGGGGGGHHHHHHHHHTTCEEEEEC---SCC-------CGGGBTTSSSB---
T ss_pred CCcceEEEeeeC--------------CCcchhhHhhHHHHHHHHcCCcEEEcC---CCC-------cHHHcCCCCcc---
Confidence 589999999551 112223334577888999999988766 432 45665433211
Q ss_pred CCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCCCC-----ChHHHHHHHHHHHHHhhccCC
Q 013811 159 DDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTSDP-----SGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 159 ~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~~~-----~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
..-.-.++..+.|.+|+..+++. |+.+ =.|-+..+.|||...... +++...++++..... +..
T Consensus 84 ~gg~L~~~~~~~~A~Yl~~~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~~~---~~~ 152 (277)
T d1nofa2 84 NGGRLLPANYSAYTSHLLDFSKY--------MQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSK---FGS 152 (277)
T ss_dssp SCCBBCGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGG---GTT
T ss_pred cCCccCHHHHHHHHHHHHHHHHH--------HHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhhhc---ccc
Confidence 11123578888999999999998 8766 247788999999865331 345666666554322 222
Q ss_pred CCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHh
Q 013811 233 NHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHI 312 (436)
Q Consensus 233 ~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~ 312 (436)
..+++....++ +|.+.. .-+....+...+|.+++|.|...... .. .++.
T Consensus 153 ~ki~~~d~~~~-----------~~~~~~-~~l~d~~a~~~v~~ia~H~Y~~~~~~---~~---------------~~~~- 201 (277)
T d1nofa2 153 LKVIVAESLGF-----------NPALTD-PVLKDSDASKYVSIIGGHLYGTTPKP---YP---------------LAQN- 201 (277)
T ss_dssp SEEEEEEETTC-----------CGGGTH-HHHTCHHHHTTCCEEEEECTTSCCCC---CH---------------HHHH-
T ss_pred cceEeehhcCC-----------cHHHhH-HHhhChHHHHHHHHhhccCCCCCccc---ch---------------hhhC-
Confidence 33333221111 111100 00111123578999999999654221 00 1122
Q ss_pred cCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccccc
Q 013811 313 LRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 313 ~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~~~ 367 (436)
.+||++++|.+........+-. ....+. ..+...+.. ...++++|....
T Consensus 202 ~~K~lw~TE~~~~~~~~~~~w~-~a~~~a---~~i~~~l~~--~~~a~~~W~~~~ 250 (277)
T d1nofa2 202 AGKQLWMTEHYVDSKQSANNWT-SAIEVG---TELNASMVS--NYSAYVWWYIRR 250 (277)
T ss_dssp TTCEEEEEEECSCTTSCTTCHH-HHHHHH---HHHHHHHHT--TEEEEEEEESBS
T ss_pred CCccceeEEeeccCCCCcccHH-HHHHHH---HHHHHHHHc--CCeeEEEcCCcC
Confidence 7999999998654332211211 122211 222233332 577899996543
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.41 E-value=2.5e-06 Score=81.93 Aligned_cols=257 Identities=12% Similarity=0.105 Sum_probs=130.2
Q ss_pred HHHHHHHHCCCCEEEEccc--cCC-CCC----CCccCCCCCC-------hhhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 72 TAFHEAASHGLTVARTWAF--SDG-GYR----PLQRSPGSYN-------EQMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~--~d~-~~~----~lq~~pg~~~-------~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
+.++.||+++..+||.+.- +++ .|. +...+|..++ +..| .+|++++.|++.|..+++++...
T Consensus 38 dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~-G~~Ef~~~~~~~gaep~~~vn~g--- 113 (367)
T d1qw9a2 38 DVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEI-GLNEFMDWAKMVGAEVNMAVNLG--- 113 (367)
T ss_dssp HHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSS-CHHHHHHHHHHHTCEEEEEECCS---
T ss_pred HHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCC-CHHHHHHHHHHhCCeEEEEEeCC---
Confidence 4578889999999999652 222 121 1222333221 1223 68999999999999999998432
Q ss_pred CCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEEEEEeecCCCCCC---CCCh
Q 013811 138 FGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIMAWELMNEPRCTS---DPSG 213 (436)
Q Consensus 138 ~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~~weL~NEp~~~~---~~~~ 213 (436)
.|....-..|..-.-.+ . +.+ +..+-.. | | ...| .|-.|+|+||+.... ..+.
T Consensus 114 ~~~~~~a~d~vey~n~~----~---~t~---------~~~~R~~-~---G---~~~P~~v~yweIGNE~~g~~~~g~~~~ 170 (367)
T d1qw9a2 114 TRGIDAARNLVEYCNHP----S---GSY---------YSDLRIA-H---G---YKEPHKIKTWCLGNAMDGPWQIGHKTA 170 (367)
T ss_dssp SCCHHHHHHHHHHHHCC----S---SSH---------HHHHHHH-T---T---CCSCCCCCEEEESSCCCSTTSTTCCCH
T ss_pred CccHHHHHHHHHHHccC----C---CCH---------HHHHHHH-c---C---CCCCCCceEEEeccccccccccCCCCH
Confidence 12222222332210000 0 000 0000000 1 1 1122 588999999987532 2356
Q ss_pred HHHHHHHHHHHHHhhccCCCCE-EEeCCCcccCCCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCC-h
Q 013811 214 RTIQAWITEMASYVKSIDRNHL-LEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSN-D 291 (436)
Q Consensus 214 ~~~~~w~~~~~~~Ir~~Dp~~l-V~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~-~ 291 (436)
+.+...+++.+++||+.||+.. |.+|........ .+.| .........+.+|++++|.|......... .
T Consensus 171 ~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~~~~~-------~~~w---~~~vl~~~~~~iD~is~H~Y~~~~~~~~~~~ 240 (367)
T d1qw9a2 171 VEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPT-------FAEW---EATVLDHTYDHVDYISLHQYYGNRDNDTANY 240 (367)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEECCCSCTTSTT-------TTHH---HHHHHHHHGGGCSEEEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCeeEEEEeCCCCCCcc-------cchH---HHHHHhhccccCCcccccCCCCCCccchhhh
Confidence 7788888999999999999864 444432211000 1101 11122234567999999999654221100 0
Q ss_pred hHhHHHHHHHHHHHHHHHH-----H--hcCCcEEEEecCCCCCC-------------CCCC---hHHHHHHHHHHHHHHH
Q 013811 292 RDQLSFLNNWLDTHIQDAE-----H--ILRKPILLAEFGKSRKD-------------PGYS---TYQRDVMFNTVYYKIY 348 (436)
Q Consensus 292 ~~~~~~~~~~i~~~~~~a~-----~--~~~kPv~i~EfG~~~~~-------------~g~~---~~~r~~~~~~~~~~i~ 348 (436)
........++++.+.+... . ..+.+|.|+|||..... ++.. -.-++..+..++=..
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~- 319 (367)
T d1qw9a2 241 LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLIT- 319 (367)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHHHHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHH-
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccCCCCceEEeeccccccccccccccccccccCcccccccCcHHHHHHHHHHHHH-
Confidence 0011122333333332221 1 12356899999974321 1110 123555544333222
Q ss_pred HHhhcCCCccceeeccccc
Q 013811 349 SSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 349 ~~~~~~~~~~G~~~W~~~~ 367 (436)
..+....+..+.++++..
T Consensus 320 -~~R~sD~V~mA~~A~lvN 337 (367)
T d1qw9a2 320 -LMKHADRVKIACLAQLVN 337 (367)
T ss_dssp -HHHTTTTEEEEEEECSBS
T ss_pred -HHHccCeeeeeehhHhhh
Confidence 223345678888998763
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=98.36 E-value=1.7e-07 Score=90.14 Aligned_cols=156 Identities=12% Similarity=0.246 Sum_probs=98.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEE--EEecccCCCCCCCh-
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKL--ILSLANNYDSFGGK- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~v--il~l~~~w~~~gg~- 141 (436)
+.+.++++|+.||++|++.|.+.++ |..+|+ .||+|| |..+|++++.++++||++ |+++|..-..-|+.
T Consensus 27 ~~~~~~~~L~~LK~aGV~gV~vdVw----WGivE~~~Pg~Yd---ws~yd~l~~mv~~~GLKi~vvmsfH~cGgnvgd~~ 99 (417)
T d1vema2 27 NWETFENDLRWAKQNGFYAITVDFW----WGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDC 99 (417)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCCCCcc
Confidence 4678999999999999999999665 556787 599999 999999999999999886 55665421111111
Q ss_pred -hhhhhHHhhcCCCCCCCCCCCCC---------------hHHHHHHHHHHHHHHh----ccccccc----------cccC
Q 013811 142 -KQYVNWARSQGQFLTSDDDFFRN---------------PVVKGYYKNLIKTVLN----RYNTFTG----------IHYK 191 (436)
Q Consensus 142 -~~y~~W~~~~G~~~~~~~~f~~~---------------~~~~~~~~~~v~~iv~----r~n~~tg----------~~yk 191 (436)
-.-|.|..+. . ..++-||+| ....+.+.++.+.+.+ ....++. .+|.
T Consensus 100 ti~lP~Wv~e~-~--~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I~ei~vglGp~GELRYP 176 (417)
T d1vema2 100 NVPIPSWVWNQ-K--SDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYP 176 (417)
T ss_dssp CBCCCGGGGGG-C--SSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCC
T ss_pred ccCCCHHHHhc-c--cCCCeeEEcCCCCCCcCccCcccCCCchhccchHHHHHHHHHHHhhhhHHHHHhccCccccccCC
Confidence 1246787532 1 123344443 2234444444433332 2223332 2599
Q ss_pred CCCcEEEEEeecCCC--CCCCCChHHHHHHHHHHHHHhhccC
Q 013811 192 DDPTIMAWELMNEPR--CTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 192 ~~p~I~~weL~NEp~--~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
.+|.+.+|...|+-. |........++.|+++-+..+.+++
T Consensus 177 syp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln 218 (417)
T d1vema2 177 SYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVN 218 (417)
T ss_dssp CCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHH
T ss_pred CCchhccccCCCCCcccCCCHHHHHHHHHHHHhhhhhhhhcc
Confidence 999998998766643 3321123567888877766665543
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=98.33 E-value=5e-06 Score=78.01 Aligned_cols=243 Identities=14% Similarity=0.136 Sum_probs=125.4
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+.++.||++|++.||++.- |+ .++.+++..||+|+|.+.+. + -..++
T Consensus 17 ~Vv~llks~~i~~VRlY~~---------------d~-------~vL~A~~~~gi~v~lGv~n~--~------l~~~~--- 63 (306)
T d1ghsa_ 17 DVVQLYRSKGINGMRIYFA---------------DG-------QALSALRNSGIGLILDIGND--Q------LANIA--- 63 (306)
T ss_dssp HHHHHHHHHTCCEEEESSC---------------CH-------HHHHHTTTSCCEEEEECCGG--G------HHHHH---
T ss_pred HHHHHHHhCCCCEEEEeCC---------------CH-------HHHHHHHhcCCEEEEEeccc--h------hhhhc---
Confidence 3467888899999999521 23 36677889999999998542 1 11111
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccC
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
++ .+.....++..+.. |.....|....++||.-... ...+...++.+.+++++..
T Consensus 64 -----------~~---~~~a~~~v~~~i~~--------~~~~~~I~~I~VGNEvl~~~---~~~l~~a~~~i~~al~~~g 118 (306)
T d1ghsa_ 64 -----------AS---TSNAASWVQNNVRP--------YYPAVNIKYIAAGNEVQGGA---TQSILPAMRNLNAALSAAG 118 (306)
T ss_dssp -----------HC---HHHHHHHHHHHTTT--------TTTTSEEEEEEEEESCCGGG---GGGHHHHHHHHHHHHHHHT
T ss_pred -----------cC---HHHHHHHHHHHHHh--------hCCCceEEEEEecceeccCC---cchhHHHHHHHHHHHHHCC
Confidence 12 23344556666655 66666799999999986542 3345556666667776543
Q ss_pred CC-CEEEeCCC-cccCCCCCc-cccCCCCCcccchhhhhcCCCCcceEEeecCCCCC-C--C------------CCC---
Q 013811 232 RN-HLLEAGLE-GFYGQSTPQ-RKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQW-L--S------------SSN--- 290 (436)
Q Consensus 232 p~-~lV~vG~~-g~~~~~~~~-~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w-~--~------------~~~--- 290 (436)
-. ..+++... .....+.|. .....+.+ ..+... ......|++.+|.||... . + ...
T Consensus 119 l~~i~v~t~~~~~~~~~~~p~s~~~f~~~~--~~~~~~-~L~~~~d~~~vN~yPyf~~~~~~~~~~l~~alf~~~~~~~~ 195 (306)
T d1ghsa_ 119 LGAIKVSTSIRFDEVANSFPPSAGVFKNAY--MTDVAR-LLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRD 195 (306)
T ss_dssp CTTSEEEEEEEGGGEECCSSGGGCEESSTH--HHHHHH-HHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEEC
T ss_pred CCCceeecccccccccCCCCCCccccchhh--hhHHHH-HHHhcCCceEeecchhhhhcCCccccccchhhcCCCCceec
Confidence 32 33333211 111111110 00001000 001101 123467889999998410 0 0 000
Q ss_pred hhH---hHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCCC-CCChHHHHHHHHHHHHHHHHHhhcCC----Cccce
Q 013811 291 DRD---QLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKDP-GYSTYQRDVMFNTVYYKIYSSAKRGG----AAAGG 360 (436)
Q Consensus 291 ~~~---~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~~-g~~~~~r~~~~~~~~~~i~~~~~~~~----~~~G~ 360 (436)
... ....+...++.......+ ..+|||+|+|.|.++.+. +.+.+....|++.+.. .++.+. .....
T Consensus 196 ~~~~~~y~n~~d~~~d~~~~A~~~~~~~~k~ivI~ETGWPS~G~~~as~~na~~y~~~l~~----~~~~gt~~r~~~i~~ 271 (306)
T d1ghsa_ 196 QNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLIN----HVGGGTPKKREALET 271 (306)
T ss_dssp TTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHT----TGGGCCSSCCSCCCE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEcccccccCCCCCCCHHHHHHHHHHHHH----HHhcCCCCCCCCceE
Confidence 000 011222222222111111 148999999999998642 3456666676665543 333221 23455
Q ss_pred eecccccCCCCCCCCC------ceEEeC
Q 013811 361 LFWQLLTEGMDAFRDG------YEIVLS 382 (436)
Q Consensus 361 ~~W~~~~~g~~~~~dg------~~i~~~ 382 (436)
++-++.|+ .|.+| |+|+..
T Consensus 272 f~FeaFDE---~wK~~~~~E~~wGlf~~ 296 (306)
T d1ghsa_ 272 YIFAMFNE---NQKTGDATERSFGLFNP 296 (306)
T ss_dssp EEECSBCC---TTCCSSGGGGGCCSBCT
T ss_pred EEEeeeCc---CCCCCCCccCccccCCC
Confidence 66677775 45443 666654
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=98.29 E-value=9.3e-07 Score=83.21 Aligned_cols=240 Identities=14% Similarity=0.166 Sum_probs=123.4
Q ss_pred HHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhh
Q 013811 71 STAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARS 150 (436)
Q Consensus 71 ~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 150 (436)
.+.++.||++|++.||++.- |+ .++.+++..||+|+|.+.+.. -..+.
T Consensus 16 ~~Vv~lLk~~~i~~IRlY~~---------------d~-------~vL~A~~~~gi~v~lGv~n~~--------l~~~~-- 63 (306)
T d1aq0a_ 16 STVVSMFKSNGIKSMRLYAP---------------NQ-------AALQAVGGTGINVVVGAPNDV--------LSNLA-- 63 (306)
T ss_dssp HHHHHHHHHHTCCEEEESSC---------------CH-------HHHHHHTTSCCEEEEEECGGG--------HHHHH--
T ss_pred HHHHHHHHhCCCCEEEEeCC---------------CH-------HHHHHHHhcCCEEEEeccchh--------hhhcc--
Confidence 34466888999999999421 23 367788899999999986531 11111
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhcc
Q 013811 151 QGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSI 230 (436)
Q Consensus 151 ~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~ 230 (436)
++ .+.....++..+.. | ....|-...++||.-.... ..+..-++.+.+++++.
T Consensus 64 ------------~~---~~~~~~~v~~~v~~--------~-~~~~I~~i~VGNE~~~~~~---~~l~~a~~ni~~al~~~ 116 (306)
T d1aq0a_ 64 ------------AS---PAAAASWVKSNIQA--------Y-PKVSFRYVCVGNEVAGGAT---RNLVPAMKNVHGALVAA 116 (306)
T ss_dssp ------------HC---HHHHHHHHHHHTTT--------C-TTSEEEEEEEEESCCGGGG---GGHHHHHHHHHHHHHHT
T ss_pred ------------CC---HHHHHHHHHHhccc--------c-CCceEEEEEeccEeecCCc---cchhhHHHHHHHHHHHC
Confidence 12 22344455555554 4 4457888999999975432 23444556666667654
Q ss_pred CCCC-EEEeCCC-cccCCCCCccccCCCCC-cccchhh---h---hcCCCCcceEEeecCCCCC---CCC-CCh------
Q 013811 231 DRNH-LLEAGLE-GFYGQSTPQRKRVNPNL-DIGTDFV---A---NNLIPGIDFATVHSYPDQW---LSS-SND------ 291 (436)
Q Consensus 231 Dp~~-lV~vG~~-g~~~~~~~~~~~~np~~-~~g~df~---~---~~~~~~iD~~s~H~Y~~~w---~~~-~~~------ 291 (436)
.-+. .+++-.. .....+.| |.. ..+.++. . .......|++.+|.||... .+. ...
T Consensus 117 gl~~i~vs~~~~~~~~~~s~p------ps~~~f~~~~~~~~~~~~~~l~~~~~~~~vN~yPyf~~~~~~~~~~l~~a~f~ 190 (306)
T d1aq0a_ 117 GLGHIKVTTSVSQAILGVFSP------PSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWAYNPSAMDMGYALFN 190 (306)
T ss_dssp TCTTSEEEEEEEGGGEEECSS------GGGCEECHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHHCTTSSCHHHHHTC
T ss_pred CCCceeEEEeecceeeccCCC------CCcceeccchHHHHHHHHHHHHHcCCeeEEecccchhhhcCccccccchhhcc
Confidence 4333 3332110 11111111 110 0000110 0 1112345678899998410 000 000
Q ss_pred -------hH---hHHHHHHHHHHHHHHHHH--hcCCcEEEEecCCCCCC-CCCChHHHHHHHHHHHHHHHHHhhcCC---
Q 013811 292 -------RD---QLSFLNNWLDTHIQDAEH--ILRKPILLAEFGKSRKD-PGYSTYQRDVMFNTVYYKIYSSAKRGG--- 355 (436)
Q Consensus 292 -------~~---~~~~~~~~i~~~~~~a~~--~~~kPv~i~EfG~~~~~-~g~~~~~r~~~~~~~~~~i~~~~~~~~--- 355 (436)
.. ....+...+.+......+ ..+|||+|+|.|.++.+ .+.+.+.+..|++.++..+ .+|.
T Consensus 191 ~~~~~~~~~~~~y~n~~~a~~d~~~~al~~~~~~~k~ivI~EtGWPS~G~~~as~~na~~y~~~l~~~~----~~gt~~~ 266 (306)
T d1aq0a_ 191 ASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHV----GRGTPRH 266 (306)
T ss_dssp CCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCCSSSSTTCCHHHHHHHHHHHHHHT----TTBCSSS
T ss_pred CCCceecCcHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEeccccccCCCCCCCHHHHHHHHHHHHHHH----hcCCCCC
Confidence 00 011222222322222222 14799999999999764 2346677777777665543 2211
Q ss_pred -CccceeecccccCCCCCCCCC-----ceEEeC
Q 013811 356 -AAAGGLFWQLLTEGMDAFRDG-----YEIVLS 382 (436)
Q Consensus 356 -~~~G~~~W~~~~~g~~~~~dg-----~~i~~~ 382 (436)
+...+++-++.|+ .|.+| |+++..
T Consensus 267 ~~~i~~f~FeaFDE---~wK~g~~E~~wGlf~~ 296 (306)
T d1aq0a_ 267 PGAIETYIFAMFNE---NQKDSGVEQNWGLFYP 296 (306)
T ss_dssp BSCCCBEESCSBCC---TTSCSSGGGCCCSBCT
T ss_pred CCCeeEEEEeeeCc---CCCCCCccCeeeeECC
Confidence 2235666777775 45544 666655
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=98.27 E-value=3.9e-06 Score=79.00 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=63.6
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+.++.|+++|++.||++. -|+ .+|..++..||+|+|.+.+. .-..|+.
T Consensus 17 ~vv~lLk~~~i~~IRlY~---------------~d~-------~vL~A~~~tgi~v~lGv~n~--------~l~~~~~-- 64 (312)
T d2cyga1 17 EVVSLYKSNNIARMRLYD---------------PNQ-------AALQALRNSNIQVLLDVPRS--------DVQSLAS-- 64 (312)
T ss_dssp HHHHHHHHTTCCEEEESS---------------CCH-------HHHHHHTTSCCEEEEEECHH--------HHHHHHH--
T ss_pred HHHHHHHhCCCCEEEEeC---------------CCH-------HHHHHHHhcCCEEEEeeccc--------hhhhccC--
Confidence 447788899999999942 133 36677788999999998542 1122221
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccC
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSID 231 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~D 231 (436)
++. .-.+.++..+.. |.....|-+..++||+-.....+...+.+. ..+.+++++..
T Consensus 65 ------------~~~---~a~~wv~~~v~~--------~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~-~~~~~aL~~~g 120 (312)
T d2cyga1 65 ------------NPS---AAGDWIRRNVVA--------YWPSVSFRYIAVGNELIPGSDLAQYILPAM-RNIYNALSSAG 120 (312)
T ss_dssp ------------CTT---HHHHHHHHHTGG--------GTTTSEEEEEEEEESCTTTSTTGGGHHHHH-HHHHHHHHHTT
T ss_pred ------------CHH---HHHHHHHHHHhc--------cCCCceEEEEEecCEEeeCCcCchhhcccH-HHHHHHHHHCC
Confidence 121 123345555555 655567989999999976544333344443 34556666543
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=98.03 E-value=4.9e-05 Score=69.84 Aligned_cols=223 Identities=13% Similarity=0.169 Sum_probs=117.4
Q ss_pred HHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhc
Q 013811 72 TAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQ 151 (436)
Q Consensus 72 ~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 151 (436)
+.|+......+..+=++.. |. +.+..+...++++...|..++|++.. | ++.. . ....
T Consensus 18 ~~f~~~~Gr~~~iv~~~~~----w~-----------~~~~~~~~~~~~~~~~g~~~~it~~P-~---~~~~--~--~ia~ 74 (273)
T d2v3ga1 18 KSFQELQGRKLDIVHQFIN----WS-----------TDFSWVRPYADAVYNNGSILMITWEP-W---EYNT--V--DIKN 74 (273)
T ss_dssp HHHHHHHTSCCSEEEEEEE----TT-----------CCHHHHHHHHHHHHHTTCEEEEEEEC-T---TCCH--H--HHHT
T ss_pred HHHHHhcCCCceEEEEecc----CC-----------CCchhHHHHHHHHHhCCCeEEEEeCC-C---CCCH--H--HHhC
Confidence 4455555555777765432 21 11344556677888999999998643 1 1110 0 0112
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC----------CChHHHHHHHH
Q 013811 152 GQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD----------PSGRTIQAWIT 221 (436)
Q Consensus 152 G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~----------~~~~~~~~w~~ 221 (436)
|. | . +.+.++.+.+.+ + +.| | .+-+.+|++.... .+++.+.+..+
T Consensus 75 G~--------y--D---~~i~~~a~~l~~---------~-g~p-v-~~R~~hE~ng~W~~W~~~~~~~~~~p~~y~~a~r 129 (273)
T d2v3ga1 75 GK--------A--D---AYITRMAQDMKA---------Y-GKE-I-WLRPLHEANGDWYPWAIGYSSRVNTNETYIAAFR 129 (273)
T ss_dssp TT--------T--H---HHHHHHHHHHHH---------H-CSC-E-EEEESCCTTSSSSTTSTTCTTCCCCHHHHHHHHH
T ss_pred cc--------h--H---HHHHHHHHHHHh---------c-CCC-E-EEEecccCCCCcccCCCCCCCCCCCHHHHHHHHH
Confidence 21 1 1 223333333332 2 345 3 4789999986421 13567888889
Q ss_pred HHHHHhhccCCCCEEEeCCCcccC-CCCCccccCCCCCcccchhhhhcCCCCcceEEeecCCCCCCCCCChhHhHHHHHH
Q 013811 222 EMASYVKSIDRNHLLEAGLEGFYG-QSTPQRKRVNPNLDIGTDFVANNLIPGIDFATVHSYPDQWLSSSNDRDQLSFLNN 300 (436)
Q Consensus 222 ~~~~~Ir~~Dp~~lV~vG~~g~~~-~~~~~~~~~np~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~ 300 (436)
.+++.+|+...+.++.+=+..-.. ........++| |. ..+|+++++.|... ..........-+.+
T Consensus 130 ~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYP----GD--------dyVD~vG~d~Y~~~--~~~~~~~~~~~~~~ 195 (273)
T d2v3ga1 130 HIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYP----GD--------NYVDYTSIDGYNWG--TTQSWGSQWQSFDQ 195 (273)
T ss_dssp HHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCC----CG--------GGCSBEEEEEEECT--TCCTTTCCCCCHHH
T ss_pred HHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCC----CC--------CEEEEEEEeccCCC--CcccchhhhhhHHH
Confidence 999999987676666542110000 00000112333 32 46899999999521 11100000000111
Q ss_pred HHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccc
Q 013811 301 WLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL 365 (436)
Q Consensus 301 ~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~ 365 (436)
-+....+.++. .+||++|+|+|..... ..+..+++.+++.+.+. .+.+.+..+|..
T Consensus 196 ~~~~~~~~~~~-~~KPi~i~E~G~~~~~-----~~~~~W~~~~~~~~~~~---~p~v~~~vwfn~ 251 (273)
T d2v3ga1 196 VFSRAYQALAS-INKPIIIAEFASAEIG-----GNKARWITEAYNSIRTS---YNKVIAAVWFHE 251 (273)
T ss_dssp HHHHHHHHHTT-SSSCEEEEEEEECSTT-----SCHHHHHHHHHHHHHHH---CTTEEEEEEECC
T ss_pred HHHHHHHHHHh-CCCCEEEEeecCCCCC-----CchhHHHHHHHHHHHhh---CCcEEEEEEecC
Confidence 22333344544 7999999999987642 13567888888766443 235666665543
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.01 E-value=7e-05 Score=71.42 Aligned_cols=242 Identities=15% Similarity=0.123 Sum_probs=125.5
Q ss_pred HHCCCCEEEEcccc-C---CCCCCCccCCC-------CCChhhhhhHHHHHHHHHHc---CCEEEEecccCCCCCCChhh
Q 013811 78 ASHGLTVARTWAFS-D---GGYRPLQRSPG-------SYNEQMFKGLDFVIAEARKY---GIKLILSLANNYDSFGGKKQ 143 (436)
Q Consensus 78 ~~~G~N~vRi~~~~-d---~~~~~lq~~pg-------~~~~~~l~~lD~~i~~a~~~---Gi~vil~l~~~w~~~gg~~~ 143 (436)
+.+|++.+|+.+.+ | ..+. ....|+ .++.+.-.....++.+|++. +|+++.+. |..
T Consensus 35 ~Glgls~~R~~IG~~d~~~~~yt-~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~asp---WSp------ 104 (354)
T d2nt0a2 35 EGIGYNIIRVPMASCDFSIRTYT-YADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASP---WTS------ 104 (354)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCC-SCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEE---SCC------
T ss_pred CCceeEEEEEeecCCCCCCCCCc-ccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcC---CCC------
Confidence 45999999997632 1 1111 111122 22233333345577777664 57777765 432
Q ss_pred hhhHHhhcCCCCC-CCCCCCCChHHHHHHHHHHHHHHhccccccccccCCC-CcEEEEEeecCCCCCC--------C-CC
Q 013811 144 YVNWARSQGQFLT-SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDD-PTIMAWELMNEPRCTS--------D-PS 212 (436)
Q Consensus 144 y~~W~~~~G~~~~-~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~-p~I~~weL~NEp~~~~--------~-~~ 212 (436)
|.|++..+.... ....---.++..+.|.+|+..+|+. |+.+ =.|-+..+.|||.... + .+
T Consensus 105 -P~wMk~n~~~~~~~~~~~~l~~~~~~~yA~Yl~~~v~~--------y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t 175 (354)
T d2nt0a2 105 -PTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDA--------YAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFT 175 (354)
T ss_dssp -CGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCC
T ss_pred -chhhhcCCcccCCCCcCCccchhHHHHHHHHHHHHHHH--------HHHcCCCceEeccCcCcCcccCCCCCCCCCCCC
Confidence 456554322110 0001112466788899999999998 8776 2366789999996321 1 24
Q ss_pred hHHHHHHHHH-HHHHhhccCCCCEEEeCCC-cccCCCCCccccCCCCCcccchhh-hhcCCCCcceEEeecCCCCCCCCC
Q 013811 213 GRTIQAWITE-MASYVKSIDRNHLLEAGLE-GFYGQSTPQRKRVNPNLDIGTDFV-ANNLIPGIDFATVHSYPDQWLSSS 289 (436)
Q Consensus 213 ~~~~~~w~~~-~~~~Ir~~Dp~~lV~vG~~-g~~~~~~~~~~~~np~~~~g~df~-~~~~~~~iD~~s~H~Y~~~w~~~~ 289 (436)
++...+++.+ +...+++......+.++.. .... .+.+. .... .......+|.+++|.|... ..
T Consensus 176 ~~~~~~fi~~~L~~~l~~~g~~~~~~~~~~~~~~~---------~~~~~--~~~l~d~~~~~~v~~ia~H~Y~~~---~~ 241 (354)
T d2nt0a2 176 PEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLL---------LPHWA--KVVLTDPEAAKYVHGIAVHWYLDF---LA 241 (354)
T ss_dssp HHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGG---------TTHHH--HHHHTSHHHHTTCCEEEEEEETTS---CC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeeCCcccc---------hHHHH--HHHhcCHhHHHhcCeEEEecCCCC---CC
Confidence 6778888875 7888887665543332221 1100 11110 0111 1123467999999999542 11
Q ss_pred ChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC----CCChHHHHHHHHHHHHHHHHHhhcCCCccceeeccc
Q 013811 290 NDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP----GYSTYQRDVMFNTVYYKIYSSAKRGGAAAGGLFWQL 365 (436)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~----g~~~~~r~~~~~~~~~~i~~~~~~~~~~~G~~~W~~ 365 (436)
... ... .. +.. +..+||++++|++...... ....-.+... +...|...+.. ...++.+|.+
T Consensus 242 ~~~---~~~----~~-~~~--~~p~k~~w~TE~~~~~~~~~~~~~~~~~~~~~~---~a~~i~~~l~~--~~~a~~~W~l 306 (354)
T d2nt0a2 242 PAK---ATL----GE-THR--LFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQ---YSHSIITNLLY--HVVGWTDWNL 306 (354)
T ss_dssp CHH---HHH----HH-HHH--HCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHH---HHHHHHHHHHT--TEEEEEEEES
T ss_pred chh---HHH----HH-HHH--hCCCceEEeeeeccCCCCCCcccccCcHHHHHH---HHHHHHHHHHh--hhhhheehhh
Confidence 111 111 11 111 1258999999996543211 1111112222 22233344443 4789999988
Q ss_pred cc
Q 013811 366 LT 367 (436)
Q Consensus 366 ~~ 367 (436)
..
T Consensus 307 ~~ 308 (354)
T d2nt0a2 307 AL 308 (354)
T ss_dssp EE
T ss_pred hc
Confidence 64
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.65 E-value=0.0036 Score=59.95 Aligned_cols=152 Identities=16% Similarity=0.168 Sum_probs=84.1
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccC--C----CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSD--G----GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d--~----~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
++-..+.+.|+.+|++|+|+|=+-.+.+ . +|.. +.|.-| ..+.|+.+|++|+++||+||+++.-
T Consensus 31 Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G-----~~~d~~~lv~~aH~~gi~VilD~V~ 105 (420)
T d2bhua3 31 GTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYG-----RPEDLMALVDAAHRLGLGVFLDVVY 105 (420)
T ss_dssp CSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccC-----CHHHHHHHHHHHHhccccccccccc
Confidence 3556677789999999999999843311 0 1211 111112 3667899999999999999999963
Q ss_pred C-CCCC-CChhhhhhH-HhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCC
Q 013811 134 N-YDSF-GGKKQYVNW-ARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSD 210 (436)
Q Consensus 134 ~-w~~~-gg~~~y~~W-~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~ 210 (436)
+ -... -....+..+ ...........+-=|.+|++++.+.+.++..++. |+=+ -+-++..+-... +
T Consensus 106 NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~--------~GVD--GfR~D~~~~l~~--~ 173 (420)
T d2bhua3 106 NHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRD--------YHFD--GLRLDATPYMTD--D 173 (420)
T ss_dssp SCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHH--------HCCS--EEEETTGGGCCC--C
T ss_pred cccCCCCccccccccccccccccccccccccccChHHHHHHHHHhheeeec--------cccc--EEEEeeeeeecc--c
Confidence 3 1110 011111000 0000000000111257899999999999998854 2211 111222111100 0
Q ss_pred CChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 211 PSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 211 ~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
....++.++.+.|++.+|+.++.
T Consensus 174 ----~~~~~~~~~~~~~~~~~p~~~~i 196 (420)
T d2bhua3 174 ----SETHILTELAQEIHELGGTHLLL 196 (420)
T ss_dssp ----SSSCHHHHHHHHHHTTCSCCEEE
T ss_pred ----cccccHHHHHHHHHhhcCCceee
Confidence 01235677889999999988764
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=96.56 E-value=0.0092 Score=56.02 Aligned_cols=145 Identities=21% Similarity=0.281 Sum_probs=83.0
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEcc-ccC---CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCC
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWA-FSD---GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNY 135 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~-~~d---~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w 135 (436)
++-..+.+.|+.+|++|+|+|-+.. +.. .+|. .+.+.-| ..+.++.+|++|+++||+||+++.-+
T Consensus 50 G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~G-----t~~d~~~lv~~~H~~Gi~vilD~V~N- 123 (382)
T d1wzla3 50 GDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFG-----DLPTFRRLVDEAHRRGIKIILDAVFN- 123 (382)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHTTTCEEEEEECCS-
T ss_pred cCHHHHHHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCC-----CHHHHHHHHHHHHhcccceEeeeeec-
Confidence 3456677889999999999999833 211 1121 1222223 25678899999999999999998532
Q ss_pred CCCCC-hhh------------hhhHHhhcCCCC---------------CC-CCCCCCChHHHHHHHHHHHHHHhcccccc
Q 013811 136 DSFGG-KKQ------------YVNWARSQGQFL---------------TS-DDDFFRNPVVKGYYKNLIKTVLNRYNTFT 186 (436)
Q Consensus 136 ~~~gg-~~~------------y~~W~~~~G~~~---------------~~-~~~f~~~~~~~~~~~~~v~~iv~r~n~~t 186 (436)
+.+. .+. |..|........ .. .+--+.+|.+++.+.+.++.+++. .+.
T Consensus 124 -H~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~--gvD 200 (382)
T d1wzla3 124 -HAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQ--GID 200 (382)
T ss_dssp -BCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHT--TCC
T ss_pred -ccccccccccchhhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHHc--CCC
Confidence 1111 011 111111000000 00 011246789999888888887753 122
Q ss_pred ccccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 187 GIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 187 g~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
| +=+-.-... ...+.+.....+++.+|+.++.
T Consensus 201 G-----------fR~D~~~~~--------~~~~~~~~~~~~~~~~p~~~~i 232 (382)
T d1wzla3 201 G-----------WRLDVANEV--------DHAFWREFRRLVKSLNPDALIV 232 (382)
T ss_dssp E-----------EEETTGGGS--------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred c-----------eeecchhhc--------chhhhhHHHHHHHhhCCceEEe
Confidence 2 222221111 2455677788888899987654
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.49 E-value=0.011 Score=55.38 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=45.5
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCC----CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDG----GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~----~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
++-..+.+.|+.+|++|+|+|-+....++ +|. .+.+.-| ..+.|+.+|++|+++||+||+++.-
T Consensus 48 Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~gY~~~~~~~id~~~G-----t~~df~~lv~~~h~~gi~VilD~V~ 120 (382)
T d1ea9c3 48 GDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFG-----DKDTLKKLVDLCHERGIRVLLDAVF 120 (382)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTC-----CHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred cCHHHHHHhhHHHHhCCCCEEEeCCCccCCCCCCCCcccccccccccC-----CHHHHHHHHHHHHhhcceEEEeeec
Confidence 34566778899999999999998432211 121 2223333 2567899999999999999999963
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=96.33 E-value=0.012 Score=55.44 Aligned_cols=107 Identities=21% Similarity=0.228 Sum_probs=65.2
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEccccCC------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWAFSDG------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~~~d~------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
++-.-+.+.|+.++++|+|+|=+-.+.+. +|. .+.|.-| ..+.|+.+|++|+++||+||+++.-
T Consensus 26 Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~G-----t~~dlk~lv~~~h~~gi~VilD~V~ 100 (400)
T d1eh9a3 26 GTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYG-----GPEGFRKLVDEAHKKGLGVILDVVY 100 (400)
T ss_dssp CSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTC-----CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccC-----CHHHHHHHHHHHHhcCCceeeeccc
Confidence 45566788899999999999999443211 111 1222223 2567899999999999999999853
Q ss_pred CCCCCCChhhhhhHHhhcCC--------CC--CCCCCCCCChHHHHHHHHHHHHHHhc
Q 013811 134 NYDSFGGKKQYVNWARSQGQ--------FL--TSDDDFFRNPVVKGYYKNLIKTVLNR 181 (436)
Q Consensus 134 ~w~~~gg~~~y~~W~~~~G~--------~~--~~~~~f~~~~~~~~~~~~~v~~iv~r 181 (436)
+ +.+.. ..|....+. +. ......+.+|.+++.+.+.++..++.
T Consensus 101 N--H~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~ 153 (400)
T d1eh9a3 101 N--HVGPE---GNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKE 153 (400)
T ss_dssp S--CCCSS---SCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred c--cccCC---CcchhhhccccccccccccccccccccccccHHHHHHHHHHHHHHhh
Confidence 2 11100 112111110 00 01122345688999999999988865
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=96.33 E-value=0.11 Score=48.70 Aligned_cols=133 Identities=18% Similarity=0.082 Sum_probs=75.1
Q ss_pred EEEeecCCCCCCC------CChHHHHHHHHHHHHHhhccCC-CCEEEeCCCc-ccCCCCCccccCCCCCcccchhhhhcC
Q 013811 198 AWELMNEPRCTSD------PSGRTIQAWITEMASYVKSIDR-NHLLEAGLEG-FYGQSTPQRKRVNPNLDIGTDFVANNL 269 (436)
Q Consensus 198 ~weL~NEp~~~~~------~~~~~~~~w~~~~~~~Ir~~Dp-~~lV~vG~~g-~~~~~~~~~~~~np~~~~g~df~~~~~ 269 (436)
.|=...|.+.... .+++.+.+..+.|.+++|+..+ +.+|-+=+.. ........-..++| .
T Consensus 165 l~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YP------------G 232 (366)
T d2bvya2 165 VFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYP------------G 232 (366)
T ss_dssp EEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCC------------C
T ss_pred EEeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCC------------C
Confidence 4899999986532 1457889999999999997544 5566541100 00000000011233 2
Q ss_pred CCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 013811 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYS 349 (436)
Q Consensus 270 ~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~~g~~~~~r~~~~~~~~~~i~~ 349 (436)
...+|++++-.|.... . ....+.+.+-+....+.+.. .+||+.|+|+|...... ........|+++++..+.+
T Consensus 233 DdyVDivG~D~Y~~~~----~-~~~~~~~~~~l~~~~~~a~~-~~Kp~altE~G~~~~~~-~~~~~~~~W~~~~l~~i~~ 305 (366)
T d2bvya2 233 DAFVDVLGLDTYDSTG----S-DAFLAGLVADLRMIAEIADE-KGKVSAFTEFGVSGGVG-TNGSSPAQWFTKVLAAIKA 305 (366)
T ss_dssp TTTCSEECCEEEESSC----C-HHHHHHHHHHHHHHHHHHHH-HTCEECBCEEEETTCSS-TTSCCCTTHHHHHHHHHHH
T ss_pred CCeEEEEEEeccCCCC----C-cchHHHHHHHHHHHHHHHHh-cCCcEEEeceeccCCcc-ccCCCcchHHHHHHHHHHh
Confidence 4679999999996431 1 11112222233444444554 69999999999865421 1111234677777776644
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.028 Score=52.07 Aligned_cols=152 Identities=13% Similarity=0.083 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHCCCCEEEEccccC-C-----CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCC
Q 013811 69 KVSTAFHEAASHGLTVARTWAFSD-G-----GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDS 137 (436)
Q Consensus 69 ~~~~~l~~l~~~G~N~vRi~~~~d-~-----~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~ 137 (436)
.+++.|++|+++|+|+|-+-.+.+ . +|.. +.|.-| ..+.|..+|++|+++||+||+++.-+ +
T Consensus 42 i~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~G-----t~~d~~~LV~~aH~~gi~VilD~V~N--H 114 (396)
T d1m7xa3 42 LADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFG-----TRDDFRYFIDAAHAAGLNVILDWVPG--H 114 (396)
T ss_dssp HHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGS-----CHHHHHHHHHHHHHTTCEEEEEECTT--S
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccC-----CHHHHHHHHHHHhhhhhhhhhccccc--c
Confidence 344556999999999999943311 1 1211 111112 25678899999999999999998532 1
Q ss_pred CCChhhhhhHHhhc--------CCCC----CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCC-cEE-------
Q 013811 138 FGGKKQYVNWARSQ--------GQFL----TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDP-TIM------- 197 (436)
Q Consensus 138 ~gg~~~y~~W~~~~--------G~~~----~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p-~I~------- 197 (436)
.+....+....... +... .....-+.+|..+..+.+.++..+.. |+-+- .+-
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~gvDG~R~D~~~~~~~ 186 (396)
T d1m7xa3 115 FPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIER--------FGIDALRVDAVASMIY 186 (396)
T ss_dssp CCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHH--------SCCCEEEECCSHHHHC
T ss_pred cCCcccccccccCCccccccCCCCCCCCCCCCccccCCCchhHHHHHHHHHHHHHH--------hCCcceeeechhhhcc
Confidence 11111111000000 0000 01122346788888888877777766 33221 000
Q ss_pred ------EE-EeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEe
Q 013811 198 ------AW-ELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEA 238 (436)
Q Consensus 198 ------~w-eL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~v 238 (436)
.+ .+.++... .......++.+++...++...|...+..
T Consensus 187 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T d1m7xa3 187 RDYSRKEGEWIPNEFGG---RENLEAIEFLRNTNRILGEQVSGAVTMA 231 (396)
T ss_dssp C--------------CT---TCCHHHHHHHHHHHHHHHHSSTTCEEEE
T ss_pred chhcccccccccccccc---cccchHHHHHHHHHHHHhhhCCCceEEE
Confidence 00 00111111 1123455677888999999999887764
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=96.25 E-value=0.012 Score=58.67 Aligned_cols=62 Identities=23% Similarity=0.301 Sum_probs=44.5
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcccc-------CCCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFS-------DGGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~-------d~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
|-.-+.+-|++++++|+|+|=+..+- +.+|. .+.|.-| .++.|+.++++|+++||+||+++.
T Consensus 111 Dl~Gi~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lG-----t~edl~~Lv~~aH~rGI~VilD~V 184 (554)
T d1g5aa2 111 DLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALG-----TIGDLREVIAALHEAGISAVVDFI 184 (554)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34567788999999999999994421 11221 1222223 267789999999999999999985
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=96.21 E-value=0.0055 Score=56.99 Aligned_cols=88 Identities=13% Similarity=0.085 Sum_probs=53.5
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCC-----------CCCCCccCCCCCCh--hh
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDG-----------GYRPLQRSPGSYNE--QM 109 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~-----------~~~~lq~~pg~~~~--~~ 109 (436)
||..+.+.|++ |-.........-..+.+.|+.||++|+|+|=+....+. .+....+..-..++ ..
T Consensus 14 ~g~~~~~~~f~--w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~~~Gt 91 (357)
T d1gcya2 14 GGDEIILQGFH--WNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGS 91 (357)
T ss_dssp GGCCCEEECCC--TTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCC
T ss_pred CCCEEEEeeee--cCCCCCCCCcHHHHHHHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCccCCC
Confidence 46667778885 43221111112356888899999999999988432110 01111111001111 12
Q ss_pred hhhHHHHHHHHHHcCCEEEEecc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.|+.+|++|+++||+||+++.
T Consensus 92 ~~df~~LV~~aH~~GI~VIlD~V 114 (357)
T d1gcya2 92 DAQLRQAASALGGAGVKVLYDVV 114 (357)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEe
Confidence 56789999999999999999985
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=96.16 E-value=0.0068 Score=55.75 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=50.6
Q ss_pred EEEEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccC----CCCC-----CCccCCCCCChhhhhhHHHHH
Q 013811 47 YFANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSD----GGYR-----PLQRSPGSYNEQMFKGLDFVI 117 (436)
Q Consensus 47 ~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i 117 (436)
+++.|++ |.... ...++-..+.+.|+.+|++|+|+|-+..+.+ .+|. .+.+. .+ ...+.++++|
T Consensus 3 ~~~~~f~--~~~~~-~~~g~~~~i~~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~--~~--G~~~~f~~lv 75 (347)
T d1ht6a2 3 VLFQGFN--WESWK-QSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDAS--KY--GNAAELKSLI 75 (347)
T ss_dssp CEEECCC--TTGGG-CTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGC--TT--CCHHHHHHHH
T ss_pred eEEeccc--cCcCC-CCCCCHHHHHHhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcc--cC--CCHHHHHHHH
Confidence 4566776 32211 1123456788889999999999999943321 1121 11111 11 1256788999
Q ss_pred HHHHHcCCEEEEecc
Q 013811 118 AEARKYGIKLILSLA 132 (436)
Q Consensus 118 ~~a~~~Gi~vil~l~ 132 (436)
++|+++||+||+++.
T Consensus 76 ~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 76 GALHGKGVQAIADIV 90 (347)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHhhcceEEeeecc
Confidence 999999999999985
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.14 E-value=0.027 Score=52.68 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=83.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYD 136 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~ 136 (436)
+-..+.+.|+.++++|+|+|=+..... .+|. .+.+.-| ..+.|+.+|++|+++||+||+++.-+
T Consensus 51 ~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~G-----t~~~~~~lv~~aH~~Gi~VilD~V~N-- 123 (382)
T d1j0ha3 51 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFG-----DKETLKTLIDRCHEKGIRVMLDAVFN-- 123 (382)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEECCS--
T ss_pred CHHHHHHhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCCC-----CHHHHHHHHHHhhhccceEEEEeeec--
Confidence 445677889999999999999833211 1121 1222223 25678899999999999999998633
Q ss_pred CCCCh-h------------hhhhHHhhcCCCC--------------C-CCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 137 SFGGK-K------------QYVNWARSQGQFL--------------T-SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 137 ~~gg~-~------------~y~~W~~~~G~~~--------------~-~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
+++.. + .|..|......+. . ..+--+.+|++++.+.+.++..++.
T Consensus 124 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~------- 196 (382)
T d1j0ha3 124 HCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIRE------- 196 (382)
T ss_dssp BCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHH-------
T ss_pred ccccccccchhhhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhh-------
Confidence 11111 0 1112211100000 0 0012245789999999999998875
Q ss_pred ccCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEE
Q 013811 189 HYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLE 237 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~ 237 (436)
|+=+ ++=+-.= ......+.++..+.+++..|+..+.
T Consensus 197 -~giD----GfR~Da~--------~~~~~~~~~~~~~~~~~~~p~~~~i 232 (382)
T d1j0ha3 197 -FDID----GWRLDVA--------NEIDHEFWREFRQEVKALKPDVYIL 232 (382)
T ss_dssp -HCCC----EEEETTG--------GGSCHHHHHHHHHHHHHHCTTCEEE
T ss_pred -cccc----EEEecch--------hhcchhhhhhhhhhhhccCCCcccc
Confidence 4322 2222111 1112455677778888888887554
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=96.05 E-value=0.041 Score=51.52 Aligned_cols=63 Identities=17% Similarity=0.288 Sum_probs=42.9
Q ss_pred chhhhHHHHHHHH--------HHCCCCEEEEccccCC----CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEE
Q 013811 65 SQRSKVSTAFHEA--------ASHGLTVARTWAFSDG----GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKL 127 (436)
Q Consensus 65 ~~~~~~~~~l~~l--------~~~G~N~vRi~~~~d~----~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~v 127 (436)
++-.-+.+-|++| |++|+|+|=+....+. +|.. +.+.-| ..+.|+.+|++|+++||+|
T Consensus 24 Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G-----~~~dlk~lv~~~H~~Gi~V 98 (409)
T d1wzaa2 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYG-----TLEDFHKLVEAAHQRGIKV 98 (409)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccC-----CHHHHHHHHHHHHhcCCEE
Confidence 3445666777777 7999999999432211 1211 112222 2567899999999999999
Q ss_pred EEecc
Q 013811 128 ILSLA 132 (436)
Q Consensus 128 il~l~ 132 (436)
|+++.
T Consensus 99 ilD~V 103 (409)
T d1wzaa2 99 IIDLP 103 (409)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 99986
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.68 E-value=0.0081 Score=56.86 Aligned_cols=65 Identities=17% Similarity=0.152 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcccc---C---CCCC---CCccCC----CCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFS---D---GGYR---PLQRSP----GSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~---d---~~~~---~lq~~p----g~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.+.|+.||++|+|+|-+..+. . .+|. ..+..+ ...++. ..+.|+.+|++|+++||+||+++.
T Consensus 24 ~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDvV 103 (393)
T d1hvxa2 24 TKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (393)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 578999999999999999994321 1 1111 011000 011211 256789999999999999999986
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=95.58 E-value=0.052 Score=52.15 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=43.7
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC------------------CCCCCccCCCCCCh---------hhhhhHHHHHH
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG------------------GYRPLQRSPGSYNE---------QMFKGLDFVIA 118 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~------------------~~~~lq~~pg~~~~---------~~l~~lD~~i~ 118 (436)
+-.-+.+-|+.|+++|+|+|=+-.+.+. +|... ..-..++ ...+.|+.+|+
T Consensus 41 d~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~--d~~~vdp~y~~~~~~~Gt~~d~~~LV~ 118 (475)
T d1bf2a3 41 TYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTE--NYFSPDRRYAYNKAAGGPTAEFQAMVQ 118 (475)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBS--CSSCBCGGGCSCCSTTHHHHHHHHHHH
T ss_pred CHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcc--cCCCcCcccccCCCCCCCHHHHHHHHH
Confidence 4455778899999999999998432110 01100 0001122 34667899999
Q ss_pred HHHHcCCEEEEecc
Q 013811 119 EARKYGIKLILSLA 132 (436)
Q Consensus 119 ~a~~~Gi~vil~l~ 132 (436)
+|+++||+||+++.
T Consensus 119 ~aH~~GIrVilD~V 132 (475)
T d1bf2a3 119 AFHNAGIKVYMDVV 132 (475)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHhcCcEEEEEec
Confidence 99999999999985
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=95.55 E-value=0.013 Score=54.69 Aligned_cols=65 Identities=20% Similarity=0.246 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccCC-C-----------CCCCccCC-CCCCh--hhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSDG-G-----------YRPLQRSP-GSYNE--QMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d~-~-----------~~~lq~~p-g~~~~--~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.+.|+.++++|+|+|=+-...+. . |....+.. -..++ ...+.|..+|++|+++||+||+++.
T Consensus 17 ~~i~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~VilD~V 96 (344)
T d1ua7a2 17 NTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (344)
T ss_dssp HHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhcccceeEeeccc
Confidence 56788899999999999998332110 0 00000000 00011 1346789999999999999999985
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.48 E-value=0.012 Score=54.56 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=44.9
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcccc------CCCCCC---CccC----CCCCChh--hhhhHHHHHHHHHHcCCEEEEe
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFS------DGGYRP---LQRS----PGSYNEQ--MFKGLDFVIAEARKYGIKLILS 130 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~------d~~~~~---lq~~----pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~ 130 (436)
+-..+.+-|+.||++|+|+|-+-.+. +.+|.. +.+. ....++. ..+.+.++|++|+++||+||++
T Consensus 21 ~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~VilD 100 (390)
T d1ud2a2 21 HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGD 100 (390)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 45678888999999999999994321 111211 0000 0112221 2577899999999999999999
Q ss_pred cc
Q 013811 131 LA 132 (436)
Q Consensus 131 l~ 132 (436)
+.
T Consensus 101 vV 102 (390)
T d1ud2a2 101 VV 102 (390)
T ss_dssp EC
T ss_pred Ec
Confidence 85
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=95.47 E-value=0.027 Score=54.24 Aligned_cols=62 Identities=18% Similarity=0.325 Sum_probs=44.1
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC-----CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG-----GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~-----~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-.-+.+-|+.||++|+|+|-+-.+.+. +|.. +.+.-| ..+.|+.+|++|+++||+||+++.
T Consensus 29 d~~Gi~~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~~d~~~vd~~~G-----t~~df~~Lv~~aH~~Gi~VilD~V 100 (478)
T d1m53a2 29 DIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYG-----TMEDFDSLVAEMKKRNMRLMIDVV 100 (478)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCcCccCCCCcCcccC-----CHHHHHHHHHHHHHCCCEEEeccc
Confidence 4456778899999999999999432211 1211 112212 356789999999999999999986
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=95.44 E-value=0.018 Score=55.02 Aligned_cols=119 Identities=16% Similarity=0.322 Sum_probs=79.6
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
+...++..|+.||++|+.-|=+-+. |-.++. .|++|| |..++++++.+++.||++.+.+.-+ -+||.
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFH--qCGGNVGD 102 (498)
T d1fa2a_ 32 DKEKVEDELKQVKAGGCDGVMVDVW----WGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSFH--QCGGNVGD 102 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEECS--CBCCCTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeee----eeEeecCCCCccC---cHHHHHHHHHHHHcCCeeEEEEeec--ccCCCCCC
Confidence 4578999999999999998887221 222343 588899 9999999999999999996655322 23432
Q ss_pred ---hhhhhHHhhcCCCCCCCCCCCCC----------------------hHHHHHHHHHHHHHHhccccccccccCC---C
Q 013811 142 ---KQYVNWARSQGQFLTSDDDFFRN----------------------PVVKGYYKNLIKTVLNRYNTFTGIHYKD---D 193 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~~~~~~f~~~----------------------~~~~~~~~~~v~~iv~r~n~~tg~~yk~---~ 193 (436)
-..|.|..+.|.. +++-||+| ....+.|.+|++.+.+. |++ .
T Consensus 103 ~v~IPLP~WV~~~g~~--~pDi~ftDr~G~rn~EyLSl~~D~~pvl~GRTplq~Y~DFm~SFr~~--------F~~~l~~ 172 (498)
T d1fa2a_ 103 AVFIPIPQWILQIGDK--NPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDN--------MADFLKA 172 (498)
T ss_dssp CCCBCSCHHHHHHTTT--CGGGEEECTTCCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHHHHH--------SHHHHHH
T ss_pred ccccCCcHHHHhhhcc--CCCceEEcCCCCcccceeeeecccccccCCCCHHHHHHHHHHHHHHH--------HHHhccC
Confidence 1246787654432 12333333 23568888888888887 544 3
Q ss_pred CcEEEEEeec
Q 013811 194 PTIMAWELMN 203 (436)
Q Consensus 194 p~I~~weL~N 203 (436)
..|...+++=
T Consensus 173 g~I~eI~VGl 182 (498)
T d1fa2a_ 173 GDIVDIEVGC 182 (498)
T ss_dssp TCEEEEEECC
T ss_pred CceEEEEecc
Confidence 4677666643
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=95.39 E-value=0.018 Score=54.74 Aligned_cols=62 Identities=21% Similarity=0.242 Sum_probs=43.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCC--------CCCC-----CccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDG--------GYRP-----LQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~--------~~~~-----lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
|-.-+.+-|++||++|+|+|-+..+.+. +|.. +.+.-| ..+.|+++|++|+++||+||+++.
T Consensus 51 d~~Gl~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~~~G-----t~~df~~lv~~~H~~Gi~VilD~V 125 (422)
T d1h3ga3 51 DIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYG-----SNEDFVRLSTEARKRGMGLIQDVV 125 (422)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCCccccCCcccccC-----CHHHHHHHHHHHHHhCccccccCc
Confidence 4456777899999999999998443110 1111 122222 256789999999999999999985
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=95.39 E-value=0.016 Score=55.37 Aligned_cols=120 Identities=13% Similarity=0.273 Sum_probs=78.2
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
++..++..|+.||++|+.-|=+-+. |-.++. .|++|| |..++++++.+++.||++.+.+.-+ -+||.
T Consensus 26 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFH--qCGGNvGD 96 (490)
T d1wdpa1 26 DPDGLKEQLLQLRAAGVDGVMVDVW----WGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSFH--QCGGNVGD 96 (490)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECS--CBCCSTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeee----eeEeecCCCCccC---hHHHHHHHHHHHHcCCeEEEEEeec--ccCCCCCc
Confidence 4578999999999999998887221 222343 588999 9999999999999999986655321 22331
Q ss_pred ---hhhhhHHhhcCCCCC--------------------CCCCCCCChHHHHHHHHHHHHHHhccccccccccCC---CCc
Q 013811 142 ---KQYVNWARSQGQFLT--------------------SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD---DPT 195 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~~--------------------~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~---~p~ 195 (436)
-..|.|..+.|...+ +....+......+.|.+|++.+.+. |++ +..
T Consensus 97 ~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~--------F~~~~~~g~ 168 (490)
T d1wdpa1 97 IVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFREN--------MSDFLESGL 168 (490)
T ss_dssp SCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHH--------THHHHHTTC
T ss_pred ccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHH--------HHHhccCCe
Confidence 124677754221100 0112333344678888888888877 554 446
Q ss_pred EEEEEee
Q 013811 196 IMAWELM 202 (436)
Q Consensus 196 I~~weL~ 202 (436)
|...+++
T Consensus 169 I~eI~VG 175 (490)
T d1wdpa1 169 IIDIEVG 175 (490)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7766664
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=95.16 E-value=0.018 Score=55.11 Aligned_cols=121 Identities=16% Similarity=0.295 Sum_probs=77.6
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-CCCCCChhhhhhHHHHHHHHHHcCCEEEEecccCCCCCCCh---
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-SPGSYNEQMFKGLDFVIAEARKYGIKLILSLANNYDSFGGK--- 141 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~--- 141 (436)
+...++..|+.||++|+.-|=+-+. |-.++. .|+.|| |..++++++.+++.||++.+.+.-+ -+||.
T Consensus 25 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFH--qCGGNVGD 95 (500)
T d1b1ya_ 25 KGDELRAQLRKLVEAGVDGVMVDVW----WGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIMSFH--QCGGNVGD 95 (500)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEEE----TTTGGGGSTTCCC---CHHHHHHHHHHHHHTCEEEEEEECS--CBSSSTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEEeec--ccCCCCCC
Confidence 3578999999999999998887322 444564 689999 9999999999999999986555321 22332
Q ss_pred ---hhhhhHHhhcCCCC-----------------C---CCCCCCCChHHHHHHHHHHHHHHhccccccccccCC---CCc
Q 013811 142 ---KQYVNWARSQGQFL-----------------T---SDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKD---DPT 195 (436)
Q Consensus 142 ---~~y~~W~~~~G~~~-----------------~---~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~---~p~ 195 (436)
-..|.|..+.|... + +....+......+.|.+|++.+.+. |++ ...
T Consensus 96 ~v~IPLP~WV~~~~~~dpDi~ftDr~G~rn~E~LSlg~D~~pvl~GRTplq~Y~DFm~SFr~~--------F~~~~~~~~ 167 (500)
T d1b1ya_ 96 AVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFREN--------MKDFLDAGV 167 (500)
T ss_dssp CSCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCTTTSCCHHHHHHHHHHHHHHH--------HHHHHHHTC
T ss_pred ccccCCcHHHHHhhccCCCeEEECCCCCcCcceeccccccccccCCCcHHHHHHHHHHHHHHH--------HHHhccCCe
Confidence 12467775422100 0 0011233334567788888877776 444 346
Q ss_pred EEEEEeec
Q 013811 196 IMAWELMN 203 (436)
Q Consensus 196 I~~weL~N 203 (436)
|...+++=
T Consensus 168 I~eI~VGl 175 (500)
T d1b1ya_ 168 IVDIEVGL 175 (500)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCc
Confidence 66666643
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=94.91 E-value=0.059 Score=50.76 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=81.1
Q ss_pred EEEeecCCCCCCC------CChHHHHHHHHHHHHHhhccCC-CCEEEeCCC-cccCCCCCccccCCCCCcccchhhhhcC
Q 013811 198 AWELMNEPRCTSD------PSGRTIQAWITEMASYVKSIDR-NHLLEAGLE-GFYGQSTPQRKRVNPNLDIGTDFVANNL 269 (436)
Q Consensus 198 ~weL~NEp~~~~~------~~~~~~~~w~~~~~~~Ir~~Dp-~~lV~vG~~-g~~~~~~~~~~~~np~~~~g~df~~~~~ 269 (436)
.|=...|.+.... .+++.+.+..+.+.+++|+..+ +.+|-+=+. +...........++| .
T Consensus 165 l~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YP------------G 232 (381)
T d1odza_ 165 IFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYP------------G 232 (381)
T ss_dssp EEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCC------------C
T ss_pred EEeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCccccccccCC------------C
Confidence 3789999886532 2457799999999999997644 556643211 111000000012233 2
Q ss_pred CCCcceEEeecCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC--CCCChHHHHHHHHHHHHHH
Q 013811 270 IPGIDFATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKD--PGYSTYQRDVMFNTVYYKI 347 (436)
Q Consensus 270 ~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~kPv~i~EfG~~~~~--~g~~~~~r~~~~~~~~~~i 347 (436)
.+.+|++++-.|...... ......+...+....+.++. .+||+.|+|+|..... .+ .....|++.++..+
T Consensus 233 DdyVDivG~D~Y~~~~~~----~~~~~~~~~~l~~~~~~A~~-~gKp~altE~G~~~~~~~~~---~~~~~W~~~~l~~i 304 (381)
T d1odza_ 233 DEWVDVLGFDTYGPVADN----ADWFRNVVANAALVARMAEA-RGKIPVISGIGIRAPDIEAG---LYDNQWYRKLISGL 304 (381)
T ss_dssp TTTCSEECCEEEECSSSC----HHHHHHHHHHHHHHHHHHHH-HTCEECBCEEEECHHHHHTT---CCCTTHHHHHHHHH
T ss_pred CCeEEEEEeeccCCCCCc----hhHHHHHHHHHHHHHHHHHh-cCCceeeeeccccCCchhcc---CcccchHHHHHHHH
Confidence 457999999999643211 11122233334444444554 7999999999975321 11 11235777777665
Q ss_pred HHHhhcCCCccceeeccccc
Q 013811 348 YSSAKRGGAAAGGLFWQLLT 367 (436)
Q Consensus 348 ~~~~~~~~~~~G~~~W~~~~ 367 (436)
...... ..++=.+.|.-..
T Consensus 305 ~~~p~~-~~i~y~~~W~N~~ 323 (381)
T d1odza_ 305 KADPDA-REIAFLLVWRNAP 323 (381)
T ss_dssp HHSTTG-GGCSEEEECCCCT
T ss_pred HhCccc-ccceEEEEEecCc
Confidence 443211 1234457786443
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=94.80 E-value=0.011 Score=56.11 Aligned_cols=62 Identities=21% Similarity=0.352 Sum_probs=43.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-cc--CC----------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FS--DG----------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKL 127 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~--d~----------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~v 127 (436)
|-.-+.+-|+.+|++|+|+|=+-. +. .. +|. .+.+.-| ..+.|+.+|++|+++||+|
T Consensus 50 d~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~~~G-----t~~d~k~Lv~~~H~~Gi~V 124 (407)
T d1qhoa4 50 DLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFG-----NWTTFDTLVNDAHQNGIKV 124 (407)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCCcccCCCCCCCCCceeeeecCCCCCCCC-----CHHHHHHHHHHhhhcccce
Confidence 445677889999999999999933 21 00 011 1122222 2567899999999999999
Q ss_pred EEecc
Q 013811 128 ILSLA 132 (436)
Q Consensus 128 il~l~ 132 (436)
|+++.
T Consensus 125 ilD~V 129 (407)
T d1qhoa4 125 IVDFV 129 (407)
T ss_dssp EEEEC
T ss_pred eeccc
Confidence 99985
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=94.80 E-value=0.014 Score=54.88 Aligned_cols=63 Identities=21% Similarity=0.298 Sum_probs=44.7
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEcc-ccC---CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWA-FSD---GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~-~~d---~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+-|+.++++|+|+|-+-. +.. .+|. .+.+.-| ..+.|+.++++|+++||+||+++.
T Consensus 20 Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~G-----t~~d~~~lv~~~h~~gi~VilD~V 91 (391)
T d1lwha2 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYG-----SEREFKEMIEAFHDSGIKVVLDLP 91 (391)
T ss_dssp CCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccC-----CHHHHHHHHHHHHhcCCEEeeccc
Confidence 3556777889999999999999933 211 1121 1122222 256789999999999999999986
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=94.68 E-value=0.021 Score=53.89 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHCCCCEEEEccccC------CCCC---CCccC----CCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWAFSD------GGYR---PLQRS----PGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~~~d------~~~~---~lq~~----pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.-+.+.|+.||++|+|+|-+-...+ .+|. ..... ....|+. ..+.|..+|++|+++||+||+++.
T Consensus 21 ~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~V 100 (393)
T d1e43a2 21 KRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (393)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEEe
Confidence 4677889999999999999943211 0110 00000 0011221 267889999999999999999985
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=94.37 E-value=0.014 Score=56.35 Aligned_cols=63 Identities=16% Similarity=0.301 Sum_probs=44.2
Q ss_pred chhhhHHHHHHHHHHCCCCEEEEcc-ccC----CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 65 SQRSKVSTAFHEAASHGLTVARTWA-FSD----GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 65 ~~~~~~~~~l~~l~~~G~N~vRi~~-~~d----~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
++-.-+.+-|++||++|+|+|-+-. +.. .+|. .+.+.-| ..+.++.+|++|+++||+||+++.
T Consensus 28 Gd~~gi~~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~~~G-----t~~df~~Lv~~aH~~Gi~VilD~V 100 (479)
T d1uoka2 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFG-----TMEDWDELLHEMHERNMKLMMDLV 100 (479)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCcCccccCCcCcccC-----CHHHHHHHHHHHHHCCCEEEeccc
Confidence 3455677789999999999999943 211 1121 1122222 256789999999999999999985
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=94.30 E-value=0.033 Score=52.39 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-ccC-C----CCC---CCcc----CCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FSD-G----GYR---PLQR----SPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~d-~----~~~---~lq~----~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
..+.+.|+.|+++|+|+|=+-. +.. . +|. .... ..+..++. ..+.|+.+|++|+++||+||+++.
T Consensus 21 ~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDvV 100 (394)
T d2d3na2 21 NRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 100 (394)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5789999999999999999833 211 0 010 0000 00112221 256789999999999999999985
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.22 E-value=0.046 Score=50.89 Aligned_cols=66 Identities=23% Similarity=0.308 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-cc--C----CCCCC-----Ccc--CCCCCChh--hhhhHHHHHHHHHHcCCEEEEec
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FS--D----GGYRP-----LQR--SPGSYNEQ--MFKGLDFVIAEARKYGIKLILSL 131 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~--d----~~~~~-----lq~--~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l 131 (436)
..+.+.|+.+|++|+|+|=+-. +. . .+|.. +.+ .++..++. ..+.|+.+|++|+++||+||+++
T Consensus 28 ~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~ 107 (361)
T d1mxga2 28 DHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (361)
T ss_dssp HHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999999999998832 21 1 11210 000 00112221 25678999999999999999998
Q ss_pred cc
Q 013811 132 AN 133 (436)
Q Consensus 132 ~~ 133 (436)
.-
T Consensus 108 V~ 109 (361)
T d1mxga2 108 VI 109 (361)
T ss_dssp CC
T ss_pred ee
Confidence 63
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.22 E-value=0.16 Score=47.20 Aligned_cols=141 Identities=8% Similarity=0.016 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHCCCCEEEEcc-ccCCCCCCCccCCCCCC----hhhhhhHHHHHHHHHHcCCEEEEecccC--CCCCCC
Q 013811 68 SKVSTAFHEAASHGLTVARTWA-FSDGGYRPLQRSPGSYN----EQMFKGLDFVIAEARKYGIKLILSLANN--YDSFGG 140 (436)
Q Consensus 68 ~~~~~~l~~l~~~G~N~vRi~~-~~d~~~~~lq~~pg~~~----~~~l~~lD~~i~~a~~~Gi~vil~l~~~--w~~~gg 140 (436)
-+.++-.+.+|++|++.|=+-+ +-|| ..-..+.-..|+ .-.-+-+..++++|+++||++-+.++.. |.....
T Consensus 99 fDa~~Wv~~ak~aGaky~vlTaKHHDG-F~Lw~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~G~YyS~~~dw~~~~~ 177 (350)
T d1hl9a2 99 WDPQEWADLFKKAGAKYVIPTTKHHDG-FCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTTE 177 (350)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEECTTC-CBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEECEEECCSCCTTSCCS
T ss_pred CCHHHHHHHHHHcCCCEEEEEEEecCC-cccCCCCCCCCCCcCCCCCCchHHHHHHHHHhcCCceeEEeccccccccccC
Confidence 4678889999999999887733 2232 110000001111 1123567899999999999999998743 322111
Q ss_pred hhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEeecCCCCCCCCChHHHHHHH
Q 013811 141 KKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWI 220 (436)
Q Consensus 141 ~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~ 220 (436)
...++. . ....-...+...+.+.+.+++|+++ |. |.++-|+-.-+... ... .
T Consensus 178 ~~~~~~-----~----~~~~~~~~~~y~~~~~~Ql~EL~~~--------Y~--p~~~w~D~~~~~~~-----~~~----~ 229 (350)
T d1hl9a2 178 PIRYPE-----D----LSYIRPNTYEYADYAYKQVMELVDL--------YL--PDVLWNDMGWPEKG-----KED----L 229 (350)
T ss_dssp CCCSGG-----G----GGTCSCCSHHHHHHHHHHHHHHHHH--------HC--CSCEEECSCCCGGG-----TTH----H
T ss_pred CCCCcc-----h----hcccCccchHHHHHHHHHHHHHHhc--------cC--CceEEecccccccc-----hhh----H
Confidence 111110 0 0011123467888899999999999 86 66665664322111 111 3
Q ss_pred HHHHHHhhccCCCCEEE
Q 013811 221 TEMASYVKSIDRNHLLE 237 (436)
Q Consensus 221 ~~~~~~Ir~~Dp~~lV~ 237 (436)
+++.+.|+++.|+.+|.
T Consensus 230 ~~~~~~i~~~qp~~~i~ 246 (350)
T d1hl9a2 230 KYLFAYYYNKHPEGSVN 246 (350)
T ss_dssp HHHHHHHHHHCTTCCBC
T ss_pred HHHHHHHHHhCCCCccc
Confidence 56788899999987653
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=94.20 E-value=0.014 Score=55.26 Aligned_cols=62 Identities=19% Similarity=0.249 Sum_probs=43.0
Q ss_pred hhhhHHHHHH--HHHHCCCCEEEEc-cccC----------------CCCC-----CCccCCCCCChhhhhhHHHHHHHHH
Q 013811 66 QRSKVSTAFH--EAASHGLTVARTW-AFSD----------------GGYR-----PLQRSPGSYNEQMFKGLDFVIAEAR 121 (436)
Q Consensus 66 ~~~~~~~~l~--~l~~~G~N~vRi~-~~~d----------------~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~ 121 (436)
+-.-+.+-|+ +||++|+|+|=+- ++.. .+|. .+.+.-| ..+.|+.+|++|+
T Consensus 53 dl~Gi~~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~G-----t~~dfk~LV~~aH 127 (406)
T d3bmva4 53 DWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFG-----SFTDFQNLINTAH 127 (406)
T ss_dssp CHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHH
T ss_pred CHHHHHHhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccc-----cHHHHHHHHHHHH
Confidence 4456788888 8999999999983 2211 0111 1122222 2567899999999
Q ss_pred HcCCEEEEecc
Q 013811 122 KYGIKLILSLA 132 (436)
Q Consensus 122 ~~Gi~vil~l~ 132 (436)
++||+||+++.
T Consensus 128 ~~Gi~VilD~V 138 (406)
T d3bmva4 128 AHNIKVIIDFA 138 (406)
T ss_dssp HTTCEEEEEEC
T ss_pred hccccceeeee
Confidence 99999999985
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=94.16 E-value=0.02 Score=53.89 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=43.3
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC-C-----------CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD-G-----------GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d-~-----------~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-.-+.+.|+.++++|+|+|=+....+ . +|. .+.+.-| ..+.|+.+|++|+++||+||
T Consensus 41 d~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~G-----t~~dfk~lv~~~H~~Gi~Vi 115 (381)
T d2guya2 41 TWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYG-----TADDLKALSSALHERGMYLM 115 (381)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSC-----CHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCC-----CHHHHHHHHHHHHhhcccee
Confidence 446677889999999999999843211 0 010 0111112 35788999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 116 lD~V 119 (381)
T d2guya2 116 VDVV 119 (381)
T ss_dssp EEEC
T ss_pred eecc
Confidence 9985
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.81 E-value=0.049 Score=53.71 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=42.8
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-ccCC----------CCCCCccCCCCCCh----------hhhhhHHHHHHHHHHcC
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-FSDG----------GYRPLQRSPGSYNE----------QMFKGLDFVIAEARKYG 124 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~~d~----------~~~~lq~~pg~~~~----------~~l~~lD~~i~~a~~~G 124 (436)
+-.-+.+-|+.||++|+|+|=+-. +.-. +|.... .-.+++ ...+.++.+|++|+++|
T Consensus 118 d~~Gi~~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~d--y~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~G 195 (572)
T d1gjwa2 118 TFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKN--PMELDERYHDPLLEPFKVDEEFKAFVEACHILG 195 (572)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEE--EEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccC--CCCCCcccccccccCCCCHHHHHHHHHHHHhcC
Confidence 445567789999999999999833 2100 011000 000111 23577899999999999
Q ss_pred CEEEEecc
Q 013811 125 IKLILSLA 132 (436)
Q Consensus 125 i~vil~l~ 132 (436)
|+||+++.
T Consensus 196 I~VIlDvV 203 (572)
T d1gjwa2 196 IRVILDFI 203 (572)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEee
Confidence 99999985
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=93.72 E-value=0.051 Score=50.28 Aligned_cols=64 Identities=8% Similarity=0.099 Sum_probs=41.5
Q ss_pred hHHHHH-HHHHHCCCCEEEEccccC---C-C-CCCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 69 KVSTAF-HEAASHGLTVARTWAFSD---G-G-YRPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 69 ~~~~~l-~~l~~~G~N~vRi~~~~d---~-~-~~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+.+ +.|+++|+++|=|....+ + . |...++..-..++. ..+.|+.+|++|+++||+||+++.
T Consensus 15 ~i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy~vd~~~Gt~~dfk~LV~~aH~~GI~VilDvV 86 (354)
T d1g94a2 15 DVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (354)
T ss_dssp HHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcceeCCCCCCHHHHHHHHHHHhccCceeEEEee
Confidence 454545 679999999999844322 1 0 11222222112221 257789999999999999999985
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=93.60 E-value=0.027 Score=52.73 Aligned_cols=79 Identities=10% Similarity=0.152 Sum_probs=49.5
Q ss_pred CCeEEEEEeecccccccccCCcchhhhHHHHHH-HHHHCCCCEEEEccccCC----C---CCCCccCCCCCChh--hhhh
Q 013811 43 NGNLYFANGFNAYWLMYVASDPSQRSKVSTAFH-EAASHGLTVARTWAFSDG----G---YRPLQRSPGSYNEQ--MFKG 112 (436)
Q Consensus 43 nGkp~~~~G~N~~~~~~~~~~~~~~~~~~~~l~-~l~~~G~N~vRi~~~~d~----~---~~~lq~~pg~~~~~--~l~~ 112 (436)
+|+.+.+.+++ |. -..+.+.+. .|+++|+++|=|....+. . |...++..-..++. ..+.
T Consensus 8 ~~~~~i~~~f~--W~---------~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~d 76 (378)
T d1jaea2 8 SGRNSIVHLFE--WK---------WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESA 76 (378)
T ss_dssp TTCEEEEEETT--CC---------HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHH
T ss_pred CCCceEEEecc--Cc---------HHHHHHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccceeCCCCCCHHH
Confidence 45556666666 21 135677777 599999999998443211 0 11122221111221 3567
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 013811 113 LDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 113 lD~~i~~a~~~Gi~vil~l~ 132 (436)
|+.+|++|+++||+||+++.
T Consensus 77 f~~LV~~aH~~GI~VilDvV 96 (378)
T d1jaea2 77 FTDMTRRCNDAGVRIYVDAV 96 (378)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHhcCceeeeeec
Confidence 89999999999999999986
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=93.52 E-value=1.4 Score=40.22 Aligned_cols=150 Identities=13% Similarity=0.147 Sum_probs=89.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCC-------CCCcc---------------CCCCCChhhhhhHHHHHHHHHHcC
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGY-------RPLQR---------------SPGSYNEQMFKGLDFVIAEARKYG 124 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~-------~~lq~---------------~pg~~~~~~l~~lD~~i~~a~~~G 124 (436)
.+.+.+.++.|+..++|++-++.-.+-+| +.+.. ..+.|. -+.++.+++-|+++|
T Consensus 17 ~~~ik~~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt---~~e~~~lv~yA~~rg 93 (344)
T d1yhta1 17 PEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLS---YRQLDDIKAYAKAKG 93 (344)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBC---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCCCCCCcccC---HHHHHHHHHHHHHcC
Confidence 47899999999999999998855332223 21110 011234 356789999999999
Q ss_pred CEEEEecccCCCCCCC-hhhhhhH------HhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEE
Q 013811 125 IKLILSLANNYDSFGG-KKQYVNW------ARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIM 197 (436)
Q Consensus 125 i~vil~l~~~w~~~gg-~~~y~~W------~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~ 197 (436)
|.||+.+-.. .+.+. ...|+.- ....+.. ....-..++|++.+..++.++++++- |.+....
T Consensus 94 I~viPeiD~P-GH~~~~~~~~p~~~~~~~~~~~~~~~-~~~~l~~~~~~t~~~~~~l~~e~~~~--------F~~~~~~- 162 (344)
T d1yhta1 94 IELIPELDSP-NHMTAIFKLVQKDRGVKYLQGLKSRQ-VDDEIDITNADSITFMQSLMSEVIDI--------FGDTSQH- 162 (344)
T ss_dssp CEEEEEEEES-SSCHHHHHHHHHHHCHHHHHHHBCSS-CTTSBCTTCHHHHHHHHHHHHHHHHH--------HGGGCSE-
T ss_pred CEEEeccchh-hHHHHHHHhchhhcCCCCccCCCCCC-CCCcccCCCchhHHHHHHHHHHHHHh--------cCCccce-
Confidence 9999987421 12111 1111110 0011111 11123346788888888999999887 6542222
Q ss_pred EEEe-ecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 198 AWEL-MNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 198 ~weL-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
+-| +=|... .+.....+..++.++.+.+++.+.
T Consensus 163 -~HiGgDE~~~-~~~~~~~~~~~~~~~~~~~~~~Gk 196 (344)
T d1yhta1 163 -FHIGGDEFGY-SVESNHEFITYANKLSYFLEKKGL 196 (344)
T ss_dssp -EEEECCSCCT-TSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred -EEeechhhhc-ccccchHHHHHHHHHHHHHHHCCC
Confidence 334 234332 223456788899999999999764
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=93.22 E-value=0.055 Score=50.73 Aligned_cols=62 Identities=13% Similarity=0.207 Sum_probs=43.4
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEccccC--------CC----CC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEE
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWAFSD--------GG----YR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLI 128 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~~~d--------~~----~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vi 128 (436)
+-.-+.+.|+.+|++|+|+|-+....+ +. |. .+.+.-| ..+.|+.+|++|+++||+||
T Consensus 41 ~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~~~G-----t~~~~k~lv~~aH~~Gi~Vi 115 (381)
T d2aaaa2 41 SWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFG-----TADNLKSLSDALHARGMYLM 115 (381)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTC-----CHHHHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCcccccccccccccccC-----CHHHHHHHHHHHhhhhhccc
Confidence 345677889999999999999843211 00 00 0112222 25678999999999999999
Q ss_pred Eecc
Q 013811 129 LSLA 132 (436)
Q Consensus 129 l~l~ 132 (436)
+++.
T Consensus 116 lD~V 119 (381)
T d2aaaa2 116 VDVV 119 (381)
T ss_dssp EEEC
T ss_pred cccc
Confidence 9985
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=92.98 E-value=1.8 Score=39.73 Aligned_cols=146 Identities=12% Similarity=0.125 Sum_probs=87.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCC-------CCc---------cC-CCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYR-------PLQ---------RS-PGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~-------~lq---------~~-pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.+.+++.++.|+...+|++-++.-.+-+|+ .+. .. .|.|.. +.+..+++.|+++||.||+
T Consensus 17 ~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~---~di~~iv~ya~~rgI~viP 93 (356)
T d1jaka1 17 VDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTK---AEYKEIVRYAASRHLEVVP 93 (356)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCH---HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCccCH---HHHHHHHHHHHHcCCeEee
Confidence 478999999999999999998654332332 111 01 234563 5667899999999999999
Q ss_pred ecccCCCCCCC-hhhhhhHHhhcCCCC--------CCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEE
Q 013811 130 SLANNYDSFGG-KKQYVNWARSQGQFL--------TSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWE 200 (436)
Q Consensus 130 ~l~~~w~~~gg-~~~y~~W~~~~G~~~--------~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~we 200 (436)
.+-.. .+.+. ...|+.... .+... ....-..++|+..+..++.+++++.- |.+ + .+.
T Consensus 94 Eid~P-gH~~~~~~~~pel~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~l--------fp~-~---~~H 159 (356)
T d1jaka1 94 EIDMP-GHTNAALASYAELNC-DGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAAL--------TPG-R---YLH 159 (356)
T ss_dssp ECCCS-SSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHT--------CCS-S---EEE
T ss_pred cCCCc-chhHHHHHhCccccc-cCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHh--------ccc-c---EEE
Confidence 97431 11111 112222111 11100 00112234678888888888888875 532 2 123
Q ss_pred e-ecCCCCCCCCChHHHHHHHHHHHHHhhccCC
Q 013811 201 L-MNEPRCTSDPSGRTIQAWITEMASYVKSIDR 232 (436)
Q Consensus 201 L-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp 232 (436)
| +-|.... ..+.+..|++++.+.+++.+.
T Consensus 160 iGgDE~~~~---~~~~~~~f~~~~~~~v~~~gk 189 (356)
T d1jaka1 160 IGGDEAHST---PKADFVAFMKRVQPIVAKYGK 189 (356)
T ss_dssp CCCCCCTTS---CHHHHHHHHHHHHHHHHHTTC
T ss_pred ecccccccc---hHHHHHHHHHHHHHHHHHcCC
Confidence 3 2333221 245688899999999998764
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.94 E-value=0.07 Score=50.18 Aligned_cols=64 Identities=5% Similarity=0.094 Sum_probs=40.4
Q ss_pred hHHHHH-HHHHHCCCCEEEEccccCC------C---CCCCccCCCCCChh--hhhhHHHHHHHHHHcCCEEEEecc
Q 013811 69 KVSTAF-HEAASHGLTVARTWAFSDG------G---YRPLQRSPGSYNEQ--MFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 69 ~~~~~l-~~l~~~G~N~vRi~~~~d~------~---~~~lq~~pg~~~~~--~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
.+.+.+ +.|+++|+++|=|....+. . |...++..-..++. ..+.|+.||++|+++||+||+++.
T Consensus 23 ~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDvV 98 (403)
T d1hx0a2 23 DIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAV 98 (403)
T ss_dssp HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCccCCCCCCHHHHHHHHHHHHhcCCEEEEEEe
Confidence 344444 6699999999988432210 0 11122221112221 256789999999999999999985
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.74 E-value=0.072 Score=52.01 Aligned_cols=25 Identities=16% Similarity=0.381 Sum_probs=21.1
Q ss_pred hhhhhHHHHHHHH-HHcCCEEEEecc
Q 013811 108 QMFKGLDFVIAEA-RKYGIKLILSLA 132 (436)
Q Consensus 108 ~~l~~lD~~i~~a-~~~Gi~vil~l~ 132 (436)
+.++.++.+|++| +++||+||+++.
T Consensus 177 ~~l~Efk~lV~a~~H~rGIkVIlD~V 202 (563)
T d2fhfa5 177 ARIKEFRTMIQAIKQDLGMNVIMDVV 202 (563)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhccCceeeecCc
Confidence 3577789999987 889999999985
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=91.61 E-value=0.13 Score=51.79 Aligned_cols=62 Identities=19% Similarity=0.229 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHHCCCCEEEEcc-c--cCC---CCC-----CCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecc
Q 013811 66 QRSKVSTAFHEAASHGLTVARTWA-F--SDG---GYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLA 132 (436)
Q Consensus 66 ~~~~~~~~l~~l~~~G~N~vRi~~-~--~d~---~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~ 132 (436)
+-..+.+.|++++++|+++|=+-. + ..+ +|. .+.|.-| ..+.++.++++|+++||+||+++.
T Consensus 15 tF~~~~~~LpYL~~LGVs~IyLsPi~~a~~gS~HGYDv~D~~~Vdp~lG-----t~edf~~LV~aaH~~Gm~VIlDiV 87 (653)
T d1iv8a2 15 NFGDVIDNLWYFKDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELG-----GEKEYRRLIETAHTIGLGIIQDIV 87 (653)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTT-----HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHCCCCEEEECccCCCCCCCCCCccccCccccchhcC-----CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 446788999999999999988732 2 111 121 1111112 357789999999999999999985
|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]
Probab=90.26 E-value=1.9 Score=38.11 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=59.1
Q ss_pred hhhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhcccccccc
Q 013811 109 MFKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGI 188 (436)
Q Consensus 109 ~l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~ 188 (436)
.+...+..|..|+++||||+|++-. |.. +. | ... .+++.++.|.+.+..++..
T Consensus 65 ~~~~~~~~i~~~q~~g~KvllsigG-~~~--~~----------~-----~~~--~~~~~~~~F~~~~~~~~~~------- 117 (285)
T d2ebna_ 65 LLTNRAKYLKPLQDKGIKVILSILG-NHD--RS----------G-----IAN--LSTARAKAFAQELKNTCDL------- 117 (285)
T ss_dssp HHHTHHHHTHHHHHTTCEEEEEEEC-CSS--SC----------C-----TTC--BCHHHHHHHHHHHHHHHHH-------
T ss_pred hhhhHHHHHHHHHhCCCEEEEEecc-CCC--Cc----------c-----ccc--CCHHHHHHHHHHHHHHHHH-------
Confidence 4666778889999999999999843 211 10 0 011 1567788898888899987
Q ss_pred ccCCCCcEEEEEeecCCC----CCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCc
Q 013811 189 HYKDDPTIMAWELMNEPR----CTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEG 242 (436)
Q Consensus 189 ~yk~~p~I~~weL~NEp~----~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g 242 (436)
|.-|--=+-||--.-+. .....+.+.+..+++++.+++ |+.+|++...+
T Consensus 118 -y~lDGiDiD~Ey~~~~~~~~~~~~~~~~~~~~~li~eLr~~~----~~~~lt~a~~~ 170 (285)
T d2ebna_ 118 -YNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAM----PNKLVTVYVYS 170 (285)
T ss_dssp -HTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHHHHHHC----TTSEEEEEESG
T ss_pred -cCCcEEeccccCccccCCCccccCcchHHHHHHHHHHHHHHC----CCCeEEEEEec
Confidence 66553222233111000 011123456666666654444 67788875533
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=90.05 E-value=0.21 Score=43.69 Aligned_cols=67 Identities=22% Similarity=0.301 Sum_probs=43.5
Q ss_pred EeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEE
Q 013811 50 NGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLIL 129 (436)
Q Consensus 50 ~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil 129 (436)
.|+..|.. .. ..+...+.++.|++.|++ |+|..- + .|..-.++..+.++.+++.|+++||+||+
T Consensus 5 LGiSvY~~-~~-----~~e~~~~yi~~a~~~Gf~--~iFTSL-------~-~~e~~~~~~~~~~~~l~~~a~~~g~~vi~ 68 (244)
T d1x7fa2 5 LGISLYPE-HS-----TKEKDMAYISAAARHGFS--RIFTCL-------L-SVNRPKEEIVAEFKEIINHAKDNNMEVIL 68 (244)
T ss_dssp EEEEECGG-GS-----CHHHHHHHHHHHHTTTEE--EEEEEE-------C-CC--------HHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEccC-CC-----CHHHHHHHHHHHHHCCCC--EEEecC-------c-cCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 47777532 21 235677899999999998 665421 0 01112355688899999999999999999
Q ss_pred ecc
Q 013811 130 SLA 132 (436)
Q Consensus 130 ~l~ 132 (436)
++.
T Consensus 69 DIs 71 (244)
T d1x7fa2 69 DVA 71 (244)
T ss_dssp EEC
T ss_pred EcC
Confidence 985
|
| >d1h41a1 c.1.8.10 (A:152-712) alpha-D-glucuronidase catalytic domain {Pseudomonas cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: alpha-D-glucuronidase/Hyaluronidase catalytic domain domain: alpha-D-glucuronidase catalytic domain species: Pseudomonas cellulosa [TaxId: 155077]
Probab=86.63 E-value=0.57 Score=44.48 Aligned_cols=101 Identities=21% Similarity=0.330 Sum_probs=69.3
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-CCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-YDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w~~~gg~~~y~ 145 (436)
..++.+.-+.+++.|+|.+=+- + +..++-...++.++.+-++-+..+-+||+|-|++.-. ....||.+
T Consensus 36 ~~R~~~YARllASiGINg~vlN---N-----VNa~~~lLt~~~l~~v~~iAd~fRpYGIkv~LS~nFasP~~lGgL~--- 104 (561)
T d1h41a1 36 APRYTDYARINASLGINGTVIN---N-----VNADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVD--- 104 (561)
T ss_dssp CHHHHHHHHHHHTTTCCEEECS---C-----SSCCGGGGSHHHHHHHHHHHHHHGGGTCEEEEEECTTHHHHTTSCS---
T ss_pred cHHHHHHHHHHhhcCcceEEec---c-----ccCCcccCCHHHHHHHHHHHHHhhcccceEEEEEeccCCcccCCCC---
Confidence 3678899999999999988762 2 2223345678889999999999999999999998311 11123322
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEee
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWELM 202 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL~ 202 (436)
+.+ --||++++.+++-+.+| |+--|...++-+.
T Consensus 105 -----------TaD--PLDp~V~~WW~~k~~ei-----------Y~~IPDfgGflVK 137 (561)
T d1h41a1 105 -----------TAD--PLDPRVQQWWKTRAQKI-----------YSYIPDFGGFLVK 137 (561)
T ss_dssp -----------CCC--TTSHHHHHHHHHHHHHH-----------HHHCTTCCEEEEC
T ss_pred -----------CCC--CCChHHHHHHHHHHHHH-----------HHhCCCccceEEe
Confidence 111 24788888887777776 4445666677663
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=86.40 E-value=0.36 Score=45.21 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=42.2
Q ss_pred hhhhHHHHHHHHHH-CCCCEEEEcc-ccC---CCCC-----CCccCCCCCChhhhhhHHHHHHHHHHcC----CEEEEec
Q 013811 66 QRSKVSTAFHEAAS-HGLTVARTWA-FSD---GGYR-----PLQRSPGSYNEQMFKGLDFVIAEARKYG----IKLILSL 131 (436)
Q Consensus 66 ~~~~~~~~l~~l~~-~G~N~vRi~~-~~d---~~~~-----~lq~~pg~~~~~~l~~lD~~i~~a~~~G----i~vil~l 131 (436)
+-.-+.+-|+++++ +|+|+|-+-. +.. .+|. .+.+.-| ..+.++.+|++|+++| |+||+++
T Consensus 67 dl~Gi~~kLdYl~~~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~G-----t~~d~~~lv~~~H~~g~~~~I~VilD~ 141 (432)
T d1ji1a3 67 DLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFG-----DNSTLQTLINDIHSTANGPKGYLILDG 141 (432)
T ss_dssp CHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred CHHHHHHHhhHHHhhcCCCEEEeCCCCcCCCCCCcccccccccCcccC-----CHHHHHHHHHHHHHhhhhcceeEeccc
Confidence 44567888999986 9999999843 211 1121 1222223 2567889999999987 8899998
Q ss_pred c
Q 013811 132 A 132 (436)
Q Consensus 132 ~ 132 (436)
.
T Consensus 142 V 142 (432)
T d1ji1a3 142 V 142 (432)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=85.98 E-value=0.29 Score=45.06 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=69.5
Q ss_pred EEeecccccccccCCcchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCC--CCChhhhhhHHHHHHHHHHcCCE
Q 013811 49 ANGFNAYWLMYVASDPSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPG--SYNEQMFKGLDFVIAEARKYGIK 126 (436)
Q Consensus 49 ~~G~N~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg--~~~~~~l~~lD~~i~~a~~~Gi~ 126 (436)
+.|.|.|...... -+.+.+.+.++.|+++|++.|=+ |.+|. ..-| .+|++.|-.+..+++.++++||+
T Consensus 7 P~gwnsW~~~~~~---i~e~~i~~~a~~~~~~g~~~i~i----DdgW~---~~~gd~~~d~~~FPglk~l~~~~h~~G~k 76 (348)
T d1zy9a2 7 PTGWCSWYHYFLD---LTWEETLKNLKLAKNFPFEVFQI----DDAYE---KDIGDWLVTRGDFPSVEEMAKVIAENGFI 76 (348)
T ss_dssp CEEEESHHHHGGG---CCHHHHHHHHHHGGGTTCSEEEE----CTTSE---EETTEEEEECTTCCCHHHHHHHHHHTTCE
T ss_pred CCEEechhhhCCC---CCHHHHHHHHHHHHcCCCcEEEE----Ccccc---cCCCCceECcccCcCHHHHHHHHHhcCCE
Confidence 3588874332221 13477888899999999997654 33341 1112 12344455688999999999999
Q ss_pred EEEecccCCCCCCC--hhhhhhHHhhcCC-C-CC----CC---CCCCCChHHHHHHHHHHHHHHh
Q 013811 127 LILSLANNYDSFGG--KKQYVNWARSQGQ-F-LT----SD---DDFFRNPVVKGYYKNLIKTVLN 180 (436)
Q Consensus 127 vil~l~~~w~~~gg--~~~y~~W~~~~G~-~-~~----~~---~~f~~~~~~~~~~~~~v~~iv~ 180 (436)
+.|.+.-.....+. ....+.|...... + .. .. .--+++|++++.+...++.+.+
T Consensus 77 ~gl~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~~ 141 (348)
T d1zy9a2 77 PGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRK 141 (348)
T ss_dssp EEEEECTTEEETTCHHHHHCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEeeeccccCCcHHHHhCccceeccCCCCccccccCCCCeeccCCCcHHHHHHHHHHHHHHHh
Confidence 99987543211111 0111222211100 0 00 00 0125789999999999988764
|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Seed storage protein species: Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]
Probab=84.23 E-value=12 Score=32.39 Aligned_cols=131 Identities=15% Similarity=0.093 Sum_probs=69.5
Q ss_pred hhhHHHHHHHHHHcCCEEEEecccCCCCCCChhhhhhHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccc
Q 013811 110 FKGLDFVIAEARKYGIKLILSLANNYDSFGGKKQYVNWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIH 189 (436)
Q Consensus 110 l~~lD~~i~~a~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~ 189 (436)
...|..-|..|++.|++|+|+|- |-. + ...+.+....+.|.+.+..+.-- .+...
T Consensus 62 ~~~l~~dI~~~q~~G~KVllSlG-------G~~---------~------~~~~~~~~~a~~fa~~~~~~~~~---~~~~~ 116 (283)
T d1cnva_ 62 CSFLESQIKECQRMGVKVFLALG-------GPK---------G------TYSACSADYAKDLAEYLHTYFLS---ERREG 116 (283)
T ss_dssp GGGGHHHHHHHHHTTCEEEEEEE-------CSS---------S------EECCCSHHHHHHHHHHHHHHHBS---SSSCB
T ss_pred hHHHHHHHHHHHhCCCEEEEEec-------CCC---------C------CcccccHHHHHHHHHHHHHhhcC---ccccc
Confidence 45677889999999999999983 210 0 01123344444555554443210 00000
Q ss_pred cCCCCcEEEEEeecCCCCCCCCChHHHHHHHHHHHHHhhccCCCCEEEeCCCcccCCCCCccccCCCCCcccchhhhhcC
Q 013811 190 YKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSIDRNHLLEAGLEGFYGQSTPQRKRVNPNLDIGTDFVANNL 269 (436)
Q Consensus 190 yk~~p~I~~weL~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~Dp~~lV~vG~~g~~~~~~~~~~~~np~~~~g~df~~~~~ 269 (436)
.-++..+=+.+|-=|-... ...+..+++.+.+..++.+++.+++...+..+... . ......
T Consensus 117 ~~~~~~lDGiDiD~E~p~~----~~~~~~~~~~l~~l~~~~~~~~~it~AP~~~~~d~----------~-----~~~~~~ 177 (283)
T d1cnva_ 117 PLGKVALDGIHFDIQKPVD----ELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDE----------Y-----LDNAIQ 177 (283)
T ss_dssp TTBSCBCSEEEEECSSCSC----STTHHHHHHHHHHHHHHHTCCCEEEECCBSSSSCT----------T-----THHHHT
T ss_pred cccccccCcccccccCCCC----cccHHHHHHHHHHHHHhcCCCeEEEeccCCccCch----------h-----hHHHhh
Confidence 2222334456654443221 12355566666666667788888887653322110 0 011223
Q ss_pred CCCcceEEeecCCCC
Q 013811 270 IPGIDFATVHSYPDQ 284 (436)
Q Consensus 270 ~~~iD~~s~H~Y~~~ 284 (436)
...+|++-+..|-..
T Consensus 178 ~~~~D~i~vq~Yn~~ 192 (283)
T d1cnva_ 178 TRHFDYIFVRFYNDR 192 (283)
T ss_dssp TTCCSEEEEECSSCT
T ss_pred cccccEEEEEeccCC
Confidence 468999999999654
|
| >d1l8na1 c.1.8.10 (A:143-678) alpha-D-glucuronidase catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: alpha-D-glucuronidase/Hyaluronidase catalytic domain domain: alpha-D-glucuronidase catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=83.72 E-value=1.1 Score=42.36 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=67.8
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC-CCCCCChhhhh
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN-YDSFGGKKQYV 145 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~-w~~~gg~~~y~ 145 (436)
..++.+.-+.+++.|+|.+=+- +..- -..++-...++.++.+-++-+..+-+||+|-|++.-. ....||.+
T Consensus 35 ~~R~~~YARllASiGINgvviN---NVNa--~~~~~~lLt~~~l~~v~~iAdvfRpYGIkv~LS~nFasP~~lGgL~--- 106 (536)
T d1l8na1 35 NQRIKDYARLLASVGINAISIN---NVNV--HKTETKLITDHFLPDVAEVADIFRTYGIKTFLSINYASPIEIGGLP--- 106 (536)
T ss_dssp CHHHHHHHHHHHHTTCCEEECS---CSSC--CTTGGGGGSTTTHHHHHHHHHHHHHTTCEEEEEECTTHHHHTTCCS---
T ss_pred chHHHHHHHHHhhcCcceEEee---cccC--CcccccccCHHHHHHHHHHHHHHhhccceEEEEeeccCccccCCCC---
Confidence 3688899999999999988872 2111 0112223567789999999999999999999998311 11123322
Q ss_pred hHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe
Q 013811 146 NWARSQGQFLTSDDDFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL 201 (436)
Q Consensus 146 ~W~~~~G~~~~~~~~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL 201 (436)
+.+ --||++++.+++-+.+|-+ --|...++-+
T Consensus 107 -----------TaD--PLDp~V~~WW~~k~~eiY~-----------~IPDfgGflV 138 (536)
T d1l8na1 107 -----------TAD--PLDPEVRWWWKETAKRIYQ-----------YIPDFGGFVV 138 (536)
T ss_dssp -----------CCC--TTSHHHHHHHHHHHHHHHH-----------HCTTCCEEEE
T ss_pred -----------CCC--CCChHHHHHHHHHHHHHHH-----------hCCCccceEE
Confidence 111 2478888888777777644 4566666665
|
| >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Putative cytoplasmic protein STM4435 species: Salmonella typhimurium [TaxId: 90371]
Probab=83.49 E-value=1.2 Score=38.69 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=47.2
Q ss_pred cchhhhHHHHHHHHHHCCCCEEEEccccCCCCCCCccCCCCCChhhhhhHHHHHHHHHHcCCEEEEecccC
Q 013811 64 PSQRSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQRSPGSYNEQMFKGLDFVIAEARKYGIKLILSLANN 134 (436)
Q Consensus 64 ~~~~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~~ 134 (436)
+..++.+++.++.++++|..+|+++...+. ...-.+...+.|.++.+.|+++|+++.+..+++
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~--------~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~ 142 (271)
T d2q02a1 80 EEVVKKTEGLLRDAQGVGARALVLCPLNDG--------TIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGF 142 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSS--------BCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEecCCCC--------ccchHHHHHHHHHHHHHHhccCCeEEEEeecCC
Confidence 344677889999999999999999543211 111235567889999999999999999887653
|
| >d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.28 E-value=2.3 Score=38.77 Aligned_cols=147 Identities=14% Similarity=0.170 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHHHCCCCEEEEccccCCCCCCCcc-------------CCCCCChhhhhhHHHHHHHHHHcCCEEEEeccc
Q 013811 67 RSKVSTAFHEAASHGLTVARTWAFSDGGYRPLQR-------------SPGSYNEQMFKGLDFVIAEARKYGIKLILSLAN 133 (436)
Q Consensus 67 ~~~~~~~l~~l~~~G~N~vRi~~~~d~~~~~lq~-------------~pg~~~~~~l~~lD~~i~~a~~~Gi~vil~l~~ 133 (436)
.+.+.+.++.|+..++|++-++.-.+-+|+ ++. ..+.|.. +.+..+++.|+++||.||..+-.
T Consensus 17 ~~~lk~~id~ma~~K~N~lhlHl~D~~~~~-~e~~~~P~l~~~g~~~~~~~yT~---~d~~~lv~yA~~rgI~iiPEid~ 92 (353)
T d1nowa1 17 VKIILKTLDAMAFNKFNVLHWHIVDDQSFP-YQSITFPELSNKGSYSLSHVYTP---NDVRMVIEYARLRGIRVLPEFDT 92 (353)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCC-BCCSSCHHHHHHHSSSTTSCBCH---HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEecCCCce-eccCCCcchhhcCCCCCCCCcCH---HHHHHHHHHHHHCCCEEEecccc
Confidence 478999999999999999987553332342 221 1234554 45678999999999999998742
Q ss_pred CCCCCCChhhhhhHHhhc---CCCCC-CCC----CCCCChHHHHHHHHHHHHHHhccccccccccCCCCcEEEEEe-ecC
Q 013811 134 NYDSFGGKKQYVNWARSQ---GQFLT-SDD----DFFRNPVVKGYYKNLIKTVLNRYNTFTGIHYKDDPTIMAWEL-MNE 204 (436)
Q Consensus 134 ~w~~~gg~~~y~~W~~~~---G~~~~-~~~----~f~~~~~~~~~~~~~v~~iv~r~n~~tg~~yk~~p~I~~weL-~NE 204 (436)
. |.......+..+- ..... ... --.++|++.+..++.+++++.- |.+ |. +.| +-|
T Consensus 93 P----GH~~~~~~~~pel~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~v~~e~~~~--------F~~-~~---~HiGgDE 156 (353)
T d1nowa1 93 P----GHTLSWGKGQKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEV--------FPD-QF---IHLGGDE 156 (353)
T ss_dssp S----SSCTTHHHHSTTCEEECCC----CCSEEEECTTCHHHHHHHHHHHHHHHHH--------CCS-SE---EEEECCS
T ss_pred h----hhHHHHHHHhhhhcCCccccCCcCCCccccCCCchhhHHHHHHHHHHHHHh--------hcc-ce---eeeeccc
Confidence 1 2211111111100 00000 000 1124677888888888888876 543 32 334 334
Q ss_pred CCCC---CC-------------CChHHHHH-HHHHHHHHhhccCCC
Q 013811 205 PRCT---SD-------------PSGRTIQA-WITEMASYVKSIDRN 233 (436)
Q Consensus 205 p~~~---~~-------------~~~~~~~~-w~~~~~~~Ir~~Dp~ 233 (436)
.... .+ .....+.. |++++++.|++.+.+
T Consensus 157 ~~~~~w~~~~~~~~~~~~~g~~~~~~~l~~~f~~~~~~~~~~~gk~ 202 (353)
T d1nowa1 157 VEFKCWESNPKIQDFMRQKGFGTDFKKLESFYIQKVLDIIATINKG 202 (353)
T ss_dssp CCCHHHHTCHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccccccccChHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHcCCc
Confidence 4321 00 01123333 688999999988654
|