Citrus Sinensis ID: 013859

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----
MPGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTNSSPSIARSVSPPPPPSKPPEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
ccccHHHccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEcccHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccEEEEHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccHHHHHHccccEEHHHHHHHHHHHcccc
ccccEEEEccccccccccccEcccccccccccccccEEEccccccccHHEcccccccccccccEEccHEEEEHHHHHcccccEEEcccccccHHHHHHHHHHHcccccHHHHcEccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccc
mpgfdiwftnslthdtnsnelvtgglfleptvsssflyfisptnsspsiarsvspppppskppevfgiwgrkrsvaatnsGLFLSVSLrndgllresnfclvqngdkssddmpkfepgnVAVEAFEKKRKSrvrgrgamnttKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINIlrtapfkavnfyaYDTYRKQLLRfsgneettnFERFIAGAAAGITASVLclpldtirtkivapggealgGVIGAFRYMIQNEGFFSLYKGLvpsimsmapsgavfYGVYDILKSAYLHSPEGRKRIQKMNQhgeeltafdqlelgpirTLLYGAIAGAcaeaatypFEVVRRRLQLQVQATKLSAVGTFVKIVEQggvpalyaGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
MPGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTNSSPSIARSVSPPPPPSKPPEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQngdkssddmpkfepGNVAVeafekkrksrvrgrgamnttKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAAtqglkgfwRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
MPGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTNsspsiarsvspppppskppEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGaiagacaeaaTYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
****************************************************************VFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLV************************************MNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLH****************ELTAFDQLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFK**
*PGFDIWFTNSLTHDT**NE*******L*PTVSSSFLYFISPTNSSPSIARSVSPPPPPSKPPEVFGI*************LFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRK**********TTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSG*EETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMN**********QLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
MPGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTN*****************PPEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
*PGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTNSSPSIARSVSPPPPPSKPPEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPE*******************QLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFK**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPGFDIWFTNSLTHDTNSNELVTGGLFLEPTVSSSFLYFISPTNSSPSIARSVSPPPPPSKPPEVFGIWGRKRSVAATNSGLFLSVSLRNDGLLRESNFCLVQNGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query435 2.2.26 [Sep-21-2011]
Q9LV81428 Probable mitochondrial ad yes no 0.958 0.974 0.643 1e-147
Q9C9R4418 Probable mitochondrial ad no no 0.928 0.966 0.601 1e-130
Q8BMD8475 Calcium-binding mitochond yes no 0.627 0.574 0.354 3e-45
Q6NUK1477 Calcium-binding mitochond yes no 0.627 0.572 0.342 6e-44
O18757475 Calcium-binding mitochond yes no 0.627 0.574 0.347 1e-43
Q54MZ4434 Mitochondrial substrate c yes no 0.708 0.709 0.316 1e-42
A5PJZ1477 Calcium-binding mitochond yes no 0.627 0.572 0.335 3e-42
Q7ZY36473 Calcium-binding mitochond N/A no 0.618 0.568 0.341 3e-42
Q5XHA0473 Calcium-binding mitochond yes no 0.618 0.568 0.337 3e-40
Q7T0U6473 Calcium-binding mitochond N/A no 0.618 0.568 0.331 6e-40
>sp|Q9LV81|BRTL3_ARATH Probable mitochondrial adenine nucleotide transporter BTL3 OS=Arabidopsis thaliana GN=At5g64970 PE=2 SV=1 Back     alignment and function desciption
 Score =  522 bits (1344), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 285/443 (64%), Positives = 344/443 (77%), Gaps = 26/443 (5%)

Query: 1   MPGFDIWFTNSLTHDT--NSNELVTGGLFLEPTVSSSFLYFISPTNSSPSIARSVSPPPP 58
           M G D W   ++  ++  ++ +++ GGLFLE ++ SS + F+S  + S +  R       
Sbjct: 1   MRGLDRWIAEAIRSESLDHNGQIICGGLFLEESLPSSSVSFLSSKDCSVNSCRF------ 54

Query: 59  PSKPPEVFGIWGRKRSVAATNSGLFLSVSLR---NDGLLRESNFCLVQNGDKSSDDMPKF 115
            S+         R+R+   T   LFLSVSL    ++G   E      QNG KS       
Sbjct: 55  -SQKSSFLKF--RRRN--GTREPLFLSVSLSINESNGEEEEGEGYNGQNGFKS------- 102

Query: 116 EPGNVAV---EAFEKKRKSRVRGRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVR 172
           E G+V +   +  ++KR+ +  G GA+NTTKHLWAGA AAMVSRT +APLER+KLEY+VR
Sbjct: 103 EKGSVLIGGGQESKEKRRVKENGAGALNTTKHLWAGAFAAMVSRTCIAPLERMKLEYIVR 162

Query: 173 GEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEET 232
           GEQ  L EL++ IA  +G++GFW+GNL+NILRTAPFK++NFYAYDTYR QLL+ SGNEET
Sbjct: 163 GEQGNLLELIQRIATNEGIRGFWKGNLVNILRTAPFKSINFYAYDTYRGQLLKLSGNEET 222

Query: 233 TNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKG 292
           TNFERF+AGAAAG+TAS+LCLPLDTIRT +VAPGGEALGGV+GAFR+MIQ EGFFSLYKG
Sbjct: 223 TNFERFVAGAAAGVTASLLCLPLDTIRTVMVAPGGEALGGVVGAFRHMIQTEGFFSLYKG 282

Query: 293 LVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTL 352
           LVPS++SMAPSGAVFYGVYDILKSAYLH+PEG+KR++ M Q GEEL AFDQLELGP+RTL
Sbjct: 283 LVPSLVSMAPSGAVFYGVYDILKSAYLHTPEGKKRLEHMKQEGEELNAFDQLELGPMRTL 342

Query: 353 LYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLL 412
           LYGAIAGAC+EAATYPFEVVRRRLQ+Q  A +LSAV T VKI+EQGGVPALYAGLIPSLL
Sbjct: 343 LYGAIAGACSEAATYPFEVVRRRLQMQSHAKRLSAVATCVKIIEQGGVPALYAGLIPSLL 402

Query: 413 QVLPSAAISYFVYEFMKIVFKVE 435
           QVLPSAAISYFVYEFMK+V KVE
Sbjct: 403 QVLPSAAISYFVYEFMKVVLKVE 425
Probable mitochondrial adenylate carrier that catalyzes the transport of ATP, ADP and AMP.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9C9R4|BRTL2_ARATH Probable mitochondrial adenine nucleotide transporter BTL2 OS=Arabidopsis thaliana GN=At1g78180 PE=2 SV=1 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query435
255545716440 Protein brittle-1, chloroplast precursor 0.970 0.959 0.710 1e-165
224084672335 predicted protein [Populus trichocarpa] 0.708 0.919 0.860 1e-153
449469871444 PREDICTED: mitochondrial substrate carri 0.928 0.909 0.683 1e-151
449503986421 PREDICTED: mitochondrial substrate carri 0.845 0.874 0.711 1e-146
15238315428 Mitochondrial substrate carrier family p 0.958 0.974 0.643 1e-145
356528463415 PREDICTED: calcium-binding mitochondrial 0.908 0.951 0.658 1e-145
356508098416 PREDICTED: mitochondrial substrate carri 0.887 0.927 0.711 1e-145
357113654418 PREDICTED: calcium-binding mitochondrial 0.728 0.758 0.779 1e-144
356518477 659 PREDICTED: uncharacterized protein LOC10 0.882 0.582 0.697 1e-144
297797517426 mitochondrial substrate carrier family p 0.956 0.976 0.654 1e-144
>gi|255545716|ref|XP_002513918.1| Protein brittle-1, chloroplast precursor, putative [Ricinus communis] gi|223547004|gb|EEF48501.1| Protein brittle-1, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/453 (71%), Positives = 362/453 (79%), Gaps = 31/453 (6%)

Query: 1   MPGFDIWFTNSLTHDT-----------NSNELVTGGLFLEPTVSSSFLYFISPTNSSPSI 49
           M GF++W   SL+ D            NS     GG+FL+PT+SSSF+  IS T SS   
Sbjct: 1   MSGFELWLKKSLSKDQFQTPFTIDSIPNSTAFTYGGIFLDPTISSSFVNLISSTTSSIKT 60

Query: 50  ARSVSPPPPPSKPPEVFGIWGRKRSVAATN----SGLFLSVSLRNDG--LLRESNFCLVQ 103
              VS     +    +F  + R+++    N    +GLFLSVSL NDG  L++E+  CLVQ
Sbjct: 61  TSLVS-----TTKHAIFTGFRREKNNNINNKAAITGLFLSVSLSNDGPELVQETKECLVQ 115

Query: 104 NGDKSSDDMPKFEPGNVAVEAFEKKRKSRVRGR-GAMNTTKHLWAGAIAAMVSRTFVAPL 162
           N D  S+        N A     +KRK  VRGR  AMNTTKHLWAGAIAAMVSRTFVAPL
Sbjct: 116 NKDAKSE--------NDAALKGRRKRKVLVRGRRAAMNTTKHLWAGAIAAMVSRTFVAPL 167

Query: 163 ERLKLEYMVRGEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQ 222
           ERLKLEYMVRGEQK + EL+KTIAATQGLKGFW+GNL+NILRTAPFKAVNF AYDTYRKQ
Sbjct: 168 ERLKLEYMVRGEQKHILELIKTIAATQGLKGFWKGNLVNILRTAPFKAVNFCAYDTYRKQ 227

Query: 223 LLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQ 282
           LLRFSGNEETTNFERFIAGAAAGITA++LCLPLDTIRTKIVAPGGEALGGVIGAFRYMI+
Sbjct: 228 LLRFSGNEETTNFERFIAGAAAGITATILCLPLDTIRTKIVAPGGEALGGVIGAFRYMIR 287

Query: 283 NEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFD 342
            EGFFSLYKGLVPSI+SMAPSGAVFYGVYDILKSAYLHSPEGRKRI+ ++QHG+EL A D
Sbjct: 288 TEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGRKRIENLSQHGQELNALD 347

Query: 343 QLELGPIRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPA 402
            LELGPIRTLLYGAI+GACAEAATYPFEVVRR+LQLQV+++K+SA+ T  KIVE+GG+PA
Sbjct: 348 LLELGPIRTLLYGAISGACAEAATYPFEVVRRQLQLQVRSSKMSALATCAKIVERGGIPA 407

Query: 403 LYAGLIPSLLQVLPSAAISYFVYEFMKIVFKVE 435
           LYAGLIPSLLQVLPSAAISYFVYE MKIV KVE
Sbjct: 408 LYAGLIPSLLQVLPSAAISYFVYECMKIVLKVE 440

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224084672|ref|XP_002307382.1| predicted protein [Populus trichocarpa] gi|222856831|gb|EEE94378.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449469871|ref|XP_004152642.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449503986|ref|XP_004162246.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15238315|ref|NP_201302.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|75311621|sp|Q9LV81.1|BRTL3_ARATH RecName: Full=Probable mitochondrial adenine nucleotide transporter BTL3; AltName: Full=Adenine nucleotide transporter BT1-like protein 3 gi|8843761|dbj|BAA97309.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gi|30793972|gb|AAP40437.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|53749186|gb|AAU90078.1| At5g64970 [Arabidopsis thaliana] gi|110737070|dbj|BAF00488.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gi|332010594|gb|AED97977.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356528463|ref|XP_003532822.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Glycine max] Back     alignment and taxonomy information
>gi|356508098|ref|XP_003522797.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Glycine max] Back     alignment and taxonomy information
>gi|357113654|ref|XP_003558616.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|356518477|ref|XP_003527905.1| PREDICTED: uncharacterized protein LOC100812227 [Glycine max] Back     alignment and taxonomy information
>gi|297797517|ref|XP_002866643.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297312478|gb|EFH42902.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query435
TAIR|locus:2177754428 AT5G64970 "AT5G64970" [Arabido 0.958 0.974 0.623 2.9e-135
TAIR|locus:2194714418 AT1G78180 "AT1G78180" [Arabido 0.935 0.973 0.590 1.7e-121
RGD|1311982475 Slc25a24 "solute carrier famil 0.613 0.562 0.359 1.2e-40
MGI|MGI:1917160475 Slc25a24 "solute carrier famil 0.613 0.562 0.356 1.6e-40
UNIPROTKB|F6Q4L6416 SLC25A24 "Uncharacterized prot 0.616 0.644 0.334 7.8e-39
UNIPROTKB|Q6NUK1477 SLC25A24 "Calcium-binding mito 0.616 0.561 0.334 2.1e-38
UNIPROTKB|A5PJZ1477 SLC25A24 "Calcium-binding mito 0.616 0.561 0.327 4.9e-37
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.698 0.700 0.319 8e-37
ZFIN|ZDB-GENE-040724-220481 si:dkey-204f11.59 "si:dkey-204 0.618 0.559 0.345 1.3e-36
UNIPROTKB|E1BW83475 SLC25A24 "Uncharacterized prot 0.616 0.564 0.317 3.5e-36
TAIR|locus:2177754 AT5G64970 "AT5G64970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
 Identities = 276/443 (62%), Positives = 328/443 (74%)

Query:     1 MPGFDIWFTNSLTHDT--NSNELVTGGLFLEPTVSSSFLYFISPTNXXXXXXXXXXXXXX 58
             M G D W   ++  ++  ++ +++ GGLFLE ++ SS + F+S  +              
Sbjct:     1 MRGLDRWIAEAIRSESLDHNGQIICGGLFLEESLPSSSVSFLSSKDCSVNSCRFSQKSSF 60

Query:    59 XXXXXEVFGIWGRKRSVAATNSGLFLSVSL---RNDGLLRESNFCLVQNGDKSSDDMPKF 115
                         R+R+   T   LFLSVSL    ++G   E      QNG KS       
Sbjct:    61 LKF---------RRRN--GTREPLFLSVSLSINESNGEEEEGEGYNGQNGFKS------- 102

Query:   116 EPGNVAVEAF-EKKRKSRVR--GRGAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVR 172
             E G+V +    E K K RV+  G GA+NTTKHLWAGA AAMVSRT +APLER+KLEY+VR
Sbjct:   103 EKGSVLIGGGQESKEKRRVKENGAGALNTTKHLWAGAFAAMVSRTCIAPLERMKLEYIVR 162

Query:   173 GEQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEET 232
             GEQ  L EL++ IA  +G++GFW+GNL+NILRTAPFK++NFYAYDTYR QLL+ SGNEET
Sbjct:   163 GEQGNLLELIQRIATNEGIRGFWKGNLVNILRTAPFKSINFYAYDTYRGQLLKLSGNEET 222

Query:   233 TNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGEALGGVIGAFRYMIQNEGFFSLYKG 292
             TNFERF+AGAAAG+TAS+LCLPLDTIRT +VAPGGEALGGV+GAFR+MIQ EGFFSLYKG
Sbjct:   223 TNFERFVAGAAAGVTASLLCLPLDTIRTVMVAPGGEALGGVVGAFRHMIQTEGFFSLYKG 282

Query:   293 LVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTL 352
             LVPS++SMAPSGAVFYGVYDILKSAYLH+PEG+KR++ M Q GEEL AFDQLELGP+RTL
Sbjct:   283 LVPSLVSMAPSGAVFYGVYDILKSAYLHTPEGKKRLEHMKQEGEELNAFDQLELGPMRTL 342

Query:   353 LYGXXXXXXXXXXTYPFEVVRRRLQLQVQATKLSAVGTFVKIVEQGGVPALYAGLIPSLL 412
             LYG          TYPFEVVRRRLQ+Q  A +LSAV T VKI+EQGGVPALYAGLIPSLL
Sbjct:   343 LYGAIAGACSEAATYPFEVVRRRLQMQSHAKRLSAVATCVKIIEQGGVPALYAGLIPSLL 402

Query:   413 QVLPSAAISYFVYEFMKIVFKVE 435
             QVLPSAAISYFVYEFMK+V KVE
Sbjct:   403 QVLPSAAISYFVYEFMKVVLKVE 425
GO:0005215 "transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009536 "plastid" evidence=IDA
TAIR|locus:2194714 AT1G78180 "AT1G78180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NUK1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJZ1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040724-220 si:dkey-204f11.59 "si:dkey-204f11.59" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW83 SLC25A24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LV81BRTL3_ARATHNo assigned EC number0.64330.95860.9742yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query435
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-23
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-18
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 5e-08
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-05
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.001
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information 
 Score = 99.8 bits (249), Expect = 1e-23
 Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 54/321 (16%)

Query: 139 MNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRG---EQKK--------LFELVKTIAA 187
            N       G I+A +S+T VAP+ER+K+    +    E K         +    + ++ 
Sbjct: 5   TNFATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYSGIVNCFRRVSK 64

Query: 188 TQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNF--ERFIAGAAAG 245
            QG+   WRGN  N++R  P +A NF   D ++    +++   +   F     ++G  AG
Sbjct: 65  EQGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTDFWKFFGVNILSGGLAG 124

Query: 246 ITASVLCLPLDTIRTKI---VAPGGE-ALGGVIGAFRYMIQNEGFFSLYKGLVPSIMSMA 301
            ++ ++  PLD  RT++   +  GG+    G+      + +  GF SLY+G   S+  + 
Sbjct: 125 ASSLLIVYPLDFARTRLASDIGKGGDREFTGLFDCLMKISKQTGFLSLYQGFGVSVQGII 184

Query: 302 PSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIA--- 358
                ++G+YD  K+               N     +             L   A+A   
Sbjct: 185 VYRGAYFGLYDSAKALLFG-----------NDKNTNI-------------LYKWAVAQTV 220

Query: 359 GACAEAATYPFEVVRRRLQL--------QVQATKLSAVGTFVKIVEQGGVPALYAGLIPS 410
              A   +YPF+ VRRR+ +        ++Q T    +  + KI++  G+   + G   +
Sbjct: 221 TILAGLISYPFDTVRRRMMMMSGRKAKSEIQYT--GTLDCWKKILKNEGLGGFFKGAWAN 278

Query: 411 LLQVLPSAAISYFVYEFMKIV 431
           +L+    A +  F  E  K++
Sbjct: 279 VLRGAGGALVLVFYDELQKLL 299

Length = 300
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 435
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.91
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.89
KOG2745321 consensus Mitochondrial carrier protein [General f 99.86
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.7
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.66
KOG2954427 consensus Mitochondrial carrier protein [General f 99.58
KOG1519297 consensus Predicted mitochondrial carrier protein 99.56
KOG2745321 consensus Mitochondrial carrier protein [General f 99.55
KOG2954427 consensus Mitochondrial carrier protein [General f 98.62
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-57  Score=431.32  Aligned_cols=277  Identities=39%  Similarity=0.670  Sum_probs=249.2

Q ss_pred             CchHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcC------CCCCHHHHHHHHHHhcCccccccccHHHHHHHHHHHHHH
Q 013859          139 MNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRG------EQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFKAVN  212 (435)
Q Consensus       139 ~~~~~~~~aG~~ag~~~~~i~~Pld~iK~r~Q~~~------~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~  212 (435)
                      ....+.++||++||+++..++.|||+||+|+|++.      .+.++.+.+++|+++||++|||||..+++++.+|+.+++
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avq  104 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQ  104 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhh
Confidence            35688899999999999999999999999999985      246789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhccHHHHhhhhccCCCC-CCCcHHHHHHHHHHhhCcccccc
Q 013859          213 FYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGGE-ALGGVIGAFRYMIQNEGFFSLYK  291 (435)
Q Consensus       213 f~~y~~~k~~l~~~~~~~~~~~~~~~~ag~~ag~~a~~v~~PldviktRlq~~~~~-~~~~~~~~~~~I~r~eG~~glyr  291 (435)
                      |.+||.+|++.....+....+...+++||++||+++++++||||++|||+-+|... .|.++.+++++|+++||++||||
T Consensus       105 f~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYr  184 (320)
T KOG0752|consen  105 FSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYR  184 (320)
T ss_pred             hhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhc
Confidence            99999999875544444466788999999999999999999999999999888654 69999999999999999999999


Q ss_pred             cchHHHHhhhhhHHHHHHHHHHHHHH-hccCCcchhhhhhccccCcccccccccCcchHHHHHHHhHHhhhhhcccccHH
Q 013859          292 GLVPSIMSMAPSGAVFYGVYDILKSA-YLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGACAEAATYPFE  370 (435)
Q Consensus       292 G~~~~llr~~~~~~i~f~~ye~lk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~a~~~t~P~D  370 (435)
                      |+.|++++.+|+.++.|.+||.+|++ +.....                   +.+.+.+..+++|++||+++..++||||
T Consensus       185 Gl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~-------------------~~~~~~~~~l~~GalAG~~aqti~yPlD  245 (320)
T KOG0752|consen  185 GLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSG-------------------NKELSNFERLLCGALAGAVAQTITYPLD  245 (320)
T ss_pred             CcchhhheehhhhhhHHHHHHHHHHhhcccccc-------------------cchhhhHHHHHHHHHHHHHHhhhcccHH
Confidence            99999999999999999999999994 332211                   1234567899999999999999999999


Q ss_pred             HHHHHHHhccc------cCCCCHHHHHHHHHHhcChhhcccChHHHHHHHhhhhhhHHHHHHHHHHhhhc
Q 013859          371 VVRRRLQLQVQ------ATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVFKV  434 (435)
Q Consensus       371 vIktrmq~~~~------~~~~~~~~~~~~i~~~eGi~glyrG~~~~l~r~~p~~~i~f~~ye~~k~~l~~  434 (435)
                      +||+|||+...      ..+.++++|+++|+++||++|||||+.|++++++|+.+++|++||.+|++++.
T Consensus       246 ~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~  315 (320)
T KOG0752|consen  246 TVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRL  315 (320)
T ss_pred             HHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhc
Confidence            99999999763      23468999999999999999999999999999999999999999999988864

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query435
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-23
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-11
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-09
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 48/318 (15%)
Query: 138 AMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKKL---------FELVKTIAAT 188
           A++  K   AG +AA +S+T VAP+ER+KL   V+   K++          + V  I   
Sbjct: 4   ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 63
Query: 189 QGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIA-----GAA 243
           QG   FWRGNL N++R  P +A+NF   D Y++  L   G +    F R+ A     G A
Sbjct: 64  QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL--GGVDRHKQFWRYFAGNLASGGA 121
Query: 244 AGITASVLCLPLDTIRTKIVAPGGEALG-----GVIGAFRYMIQNEGFFSLYKGLVPSIM 298
           AG T+     PLD  RT++ A  G+        G+      + +++G   LY+G   S+ 
Sbjct: 122 AGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQ 181
Query: 299 SMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGXXX 358
            +    A ++GVYD  K   L  P+        N H              I + +     
Sbjct: 182 GIIIYRAAYFGVYDTAK-GMLPDPK--------NVH-------------IIVSWMIAQTV 219
Query: 359 XXXXXXXTYPFEVVRRRLQLQ-----VQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQ 413
                  +YPF+ VRRR+ +Q             V  + KI +  G  A + G   ++L+
Sbjct: 220 TAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 279
Query: 414 VLPSAAISYFVYEFMKIV 431
            +  A +     E  K V
Sbjct: 280 GMGGAFVLVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query435
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-79
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-36
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-14
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-07
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-38
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-06
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  247 bits (632), Expect = 1e-79
 Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 45/315 (14%)

Query: 137 GAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKK---------LFELVKTIAA 187
            A++  K   AG +AA +S+T VAP+ER+KL   V+   K+         + + V  I  
Sbjct: 3   QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPK 62

Query: 188 TQGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTN---FERFIAGAAA 244
            QG   FWRGNL N++R  P +A+NF   D Y++  L      +           +G AA
Sbjct: 63  EQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAA 122

Query: 245 GITASVLCLPLDTIRTKIVAPGGEALG-----GVIGAFRYMIQNEGFFSLYKGLVPSIMS 299
           G T+     PLD  RT++ A  G+        G+      + +++G   LY+G   S+  
Sbjct: 123 GATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 182

Query: 300 MAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAG 359
           +    A ++GVYD  K                          D   +  I + +      
Sbjct: 183 IIIYRAAYFGVYDTAKGMLP----------------------DPKNVHIIVSWMIAQTVT 220

Query: 360 ACAEAATYPFEVVRRRLQLQVQATKL-----SAVGTFVKIVEQGGVPALYAGLIPSLLQV 414
           A A   +YPF+ VRRR+ +Q             V  + KI +  G  A + G   ++L+ 
Sbjct: 221 AVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG 280

Query: 415 LPSAAISYFVYEFMK 429
           +   A    +Y+ +K
Sbjct: 281 MGG-AFVLVLYDEIK 294
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query435
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-54  Score=419.94  Aligned_cols=271  Identities=30%  Similarity=0.472  Sum_probs=236.4

Q ss_pred             CchHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcC---------CCCCHHHHHHHHHHhcCccccccccHHHHHHHHHHH
Q 013859          139 MNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRG---------EQKKLFELVKTIAATQGLKGFWRGNLINILRTAPFK  209 (435)
Q Consensus       139 ~~~~~~~~aG~~ag~~~~~i~~Pld~iK~r~Q~~~---------~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~~~  209 (435)
                      .+.+.++++|++||+++.++++|+|+||+|+|++.         .+++.++++++|+++||++|||||+.+++++.++++
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~   84 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   84 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence            45678999999999999999999999999999864         368999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCC---chHHHHHHHHHHHHHHHHhhccHHHHhhhhccCCC-----CCCCcHHHHHHHHH
Q 013859          210 AVNFYAYDTYRKQLLRFSGNEET---TNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGG-----EALGGVIGAFRYMI  281 (435)
Q Consensus       210 ~~~f~~y~~~k~~l~~~~~~~~~---~~~~~~~ag~~ag~~a~~v~~PldviktRlq~~~~-----~~~~~~~~~~~~I~  281 (435)
                      +++|.+||.+|+.+....+....   .....+++|++||++++++++|+|+||+|+|++..     ..|.++++++++|+
T Consensus        85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~  164 (297)
T 1okc_A           85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF  164 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence            99999999999965432222111   24578999999999999999999999999998743     35889999999999


Q ss_pred             HhhCcccccccchHHHHhhhhhHHHHHHHHHHHHHHhccCCcchhhhhhccccCcccccccccCcchHHHHHHHhHHhhh
Q 013859          282 QNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGAC  361 (435)
Q Consensus       282 r~eG~~glyrG~~~~llr~~~~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~  361 (435)
                      ++||++|||||+.++++|.+|+.+++|.+||.+|+.+.+.                      ...+.+..+++|++||++
T Consensus       165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~----------------------~~~~~~~~~~~g~~ag~~  222 (297)
T 1okc_A          165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP----------------------KNVHIIVSWMIAQTVTAV  222 (297)
T ss_dssp             HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG----------------------GCSCHHHHHHHHHHHHHH
T ss_pred             HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC----------------------CCccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999864321                      013456789999999999


Q ss_pred             hhcccccHHHHHHHHHhccc-----cCCCCHHHHHHHHHHhcChhhcccChHHHHHHHhhhhhhHHHHHHHHHHhh
Q 013859          362 AEAATYPFEVVRRRLQLQVQ-----ATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFMKIVF  432 (435)
Q Consensus       362 a~~~t~P~DvIktrmq~~~~-----~~~~~~~~~~~~i~~~eGi~glyrG~~~~l~r~~p~~~i~f~~ye~~k~~l  432 (435)
                      +++++||+||||+|||++..     ..|.+.++|+++|+++||++|||||+.|+++|. +..+++|.+||.+|+++
T Consensus       223 a~~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          223 AGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred             HHHhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence            99999999999999998753     257899999999999999999999999999996 56899999999998764
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 435
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-27
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-08
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  107 bits (267), Expect = 6e-27
 Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 45/311 (14%)

Query: 138 AMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKK---------LFELVKTIAAT 188
           A++  K   AG +AA +S+T VAP+ER+KL   V+   K+         + + V  I   
Sbjct: 3   ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 62

Query: 189 QGLKGFWRGNLINILRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNF---ERFIAGAAAG 245
           QG   FWRGNL N++R  P +A+NF   D Y++  L      +           +G AAG
Sbjct: 63  QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAG 122

Query: 246 ITASVLCLPLDTIRTKIVAPGGEA-----LGGVIGAFRYMIQNEGFFSLYKGLVPSIMSM 300
            T+     PLD  RT++ A  G+        G+      + +++G   LY+G   S+  +
Sbjct: 123 ATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 182

Query: 301 APSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAGA 360
               A ++GVYD  K                          D   +  I + +      A
Sbjct: 183 IIYRAAYFGVYDTAKGML----------------------PDPKNVHIIVSWMIAQTVTA 220

Query: 361 CAEAATYPFEVVRRRLQLQ-----VQATKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVL 415
            A   +YPF+ VRRR+ +Q             V  + KI +  G  A + G   ++L+ +
Sbjct: 221 VAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGM 280

Query: 416 PSAAISYFVYE 426
              A    +Y+
Sbjct: 281 GG-AFVLVLYD 290
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query435
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=6.8e-49  Score=377.24  Aligned_cols=269  Identities=30%  Similarity=0.479  Sum_probs=238.3

Q ss_pred             CCCchHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcC---------CCCCHHHHHHHHHHhcCccccccccHHHHHHHHH
Q 013859          137 GAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRG---------EQKKLFELVKTIAATQGLKGFWRGNLINILRTAP  207 (435)
Q Consensus       137 ~~~~~~~~~~aG~~ag~~~~~i~~Pld~iK~r~Q~~~---------~~~~~~~~~~~i~~~eG~~glyrG~~~~~~~~~~  207 (435)
                      +..++.++++||++||+++.+++||||+||+|+|+++         .+++.++++++++++||+++||||+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            3467789999999999999999999999999999853         2578999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCC---chHHHHHHHHHHHHHHHHhhccHHHHhhhhccCCC-----CCCCcHHHHHHH
Q 013859          208 FKAVNFYAYDTYRKQLLRFSGNEET---TNFERFIAGAAAGITASVLCLPLDTIRTKIVAPGG-----EALGGVIGAFRY  279 (435)
Q Consensus       208 ~~~~~f~~y~~~k~~l~~~~~~~~~---~~~~~~~ag~~ag~~a~~v~~PldviktRlq~~~~-----~~~~~~~~~~~~  279 (435)
                      ..+++|.+|+.+++.+.+.....+.   .....+++|.+||+++.++++|+|++|+|+|.+..     ..+.+..+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~  161 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  161 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence            9999999999999998876433322   23467889999999999999999999999998643     356789999999


Q ss_pred             HHHhhCcccccccchHHHHhhhhhHHHHHHHHHHHHHHhccCCcchhhhhhccccCcccccccccCcchHHHHHHHhHHh
Q 013859          280 MIQNEGFFSLYKGLVPSIMSMAPSGAVFYGVYDILKSAYLHSPEGRKRIQKMNQHGEELTAFDQLELGPIRTLLYGAIAG  359 (435)
Q Consensus       280 I~r~eG~~glyrG~~~~llr~~~~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag  359 (435)
                      ++++||+++||+|+.+++++++++.+++|..||.+|+.+.+                      .........++++++++
T Consensus       162 ~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~----------------------~~~~~~~~~~~~~~~~~  219 (292)
T d1okca_         162 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD----------------------PKNVHIIVSWMIAQTVT  219 (292)
T ss_dssp             HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG----------------------GGCSCHHHHHHHHHHHH
T ss_pred             hhhccchhhhhccccccccceehHhhhhhhhccchhhhccc----------------------ccccchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999976532                      12234677899999999


Q ss_pred             hhhhcccccHHHHHHHHHhcccc-----CCCCHHHHHHHHHHhcChhhcccChHHHHHHHhhhhhhHHHHHHHH
Q 013859          360 ACAEAATYPFEVVRRRLQLQVQA-----TKLSAVGTFVKIVEQGGVPALYAGLIPSLLQVLPSAAISYFVYEFM  428 (435)
Q Consensus       360 ~~a~~~t~P~DvIktrmq~~~~~-----~~~~~~~~~~~i~~~eGi~glyrG~~~~l~r~~p~~~i~f~~ye~~  428 (435)
                      +++++++||+||||+|||.+...     .|.++++|+++++++||+++||||+.|+++|.+| .+++|.+||.+
T Consensus       220 ~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         220 AVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            99999999999999999997642     4679999999999999999999999999999876 68999999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure