Citrus Sinensis ID: 013887

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----

MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW

ccccccHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccEEEcccccccccccEEEccccccccccccEEEEEccccccccEEEEEccccccEEEEEEEEccccccccccccEEEEEccEEEEEEcccccccccccccEEEEEEEEEcccEEEEEEEccccccEEEEEEEEEcccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccHHHHHcccccccccEEEEEEccccccEEEEEEEEEccccccccccEEEEEEEccEEEcccccccccccEEEEEEEEEEEccccEEEEEEEcccccccccccEEcccccccccccccHHHHHHHHHHHHccccccccccccccccccccccEEEEcccccccccEEEcccccccc

cHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccEEEccccHcccccccccccccccccccccEEEccccccccccEEEEEcccccEEEEEEEEEEcccccccccccEEEEEcccEEEEEEEEEccccccccEEEEEEEEcccccEEEEEEEccccccEEEEEEEcccccccccccccccccEEHEEEEccccccccccEEEccccccccEEcccccccccccccccEEEcccccccccccccccccHHHHHHccccccccEEEccccccccEEEEEEEHHHHHHcccccEEEEEEEEcccccccccccccccccEEEcccccccccEEEEEEEEccccccccEEEHEEEEEEEEccccccHHHHHHHHHHHHHcccccccccccccccccccccccccEccccccccccEEEEEEcccc

msllspssfFFLSLLLVLPlslassypykasyridcgsatsttdpfnttwqaddryytsgatsivseplhfrfphektlryfppssgkkncyiipnlppgryyirtftvydnydgkshspsfdvsvegtlvfswrspwpeglardgaySDLFAFvkdgeldlcfysfatdppviaslevqqidplsydaatignnhILVNygrltsgsnqwgpgfsndaddfgrswqsdaasrspnakssiksvttreritntnqppnyypmklYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVndknvtrvdIFNSVGSFAAYSWHYVAKNlssteltvKLVPVVGAALISglenyalvpndlstVPEQVIAMRALKEslrvpdrmgwngdpcaptnwdawegitchpnkdETAVVISQMNSSLW

MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGsatsttdpfnttwQADDRYYTSGATSIVSEPLHFRFPHEKTlryfppssgkkncYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWqsdaasrspnakssiksvttreritntnqppnyypMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKEslrvpdrmgwNGDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW

MsllspssffflslllvlplslassYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW

*******SFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQW**********************************************NYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVV*********

******S*FFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIV****HFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW

MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRS********************TRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMNSSLW

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		434	2.2.26 [Sep-21-2011]
Q9FZB1		872	Probable LRR receptor-lik	no	no	0.813	0.404	0.275	1e-23
O81069		884	Probable leucine-rich rep	no	no	0.799	0.392	0.25	1e-18
C0LGG6		876	Probable LRR receptor-lik	no	no	0.866	0.429	0.266	1e-18
C0LGG4		890	Probable LRR receptor-lik	no	no	0.894	0.435	0.260	1e-17
Q9FN94		868	Receptor-like protein kin	no	no	0.799	0.399	0.258	8e-17
Q9FZB8		871	Probable LRR receptor-lik	no	no	0.877	0.437	0.244	2e-16
C0LGD8		864	Probable LRR receptor-lik	no	no	0.813	0.408	0.263	2e-16
C0LGT5		866	Probable LRR receptor-lik	no	no	0.702	0.352	0.249	3e-16
Q9LIG2		899	Receptor-like protein kin	no	no	0.891	0.430	0.250	3e-16
Q9SNA3		889	Putative receptor-like pr	no	no	0.841	0.410	0.244	3e-16

>sp\|Q9FZB1\|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1	Back alignment and function desciption

 Score =  111 bits (277), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 188/421 (44%), Gaps = 68/421 (16%)

Query: 34  IDCG----SATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEK-TLRYFPPSSGK 88
           +DCG    +AT T    N T+++D  Y  SG    +S     +   +  T+R FP   G+
Sbjct: 32  LDCGLVPKNATYTEKTTNITYKSDANYIDSGLVGRISAEYKAQLQQQTWTVRSFP--EGE 89

Query: 89  KNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAY 148
           +NCY        RY IR    Y NYDG    P FD+ +  +    W S   +G+  +GA 
Sbjct: 90  RNCYNFNLTAKSRYLIRATFTYGNYDGLRQVPKFDIHIGPS---KWTSVKLDGVG-NGAV 145

Query: 149 SDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGS 208
            ++   +    L +C        P I+SLE++ ++  +Y    +  +  L+ + R+   +
Sbjct: 146 LEMIHVLTQDRLQICLVKTGKGIPFISSLELRPLNNNTY----LTQSGSLIGFARVFFSA 201

Query: 209 NQWGPGFSN-DADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQT 267
               P F   D D   R W            + +KS++T   +  +N  P   P  + +T
Sbjct: 202 T---PTFIRYDEDIHDRVWVRQFG-------NGLKSISTDLLVDTSN--PYDVPQAVAKT 249

Query: 268 AIVSSGAIQYNLAVDAKLDYL-----IWFHFAEI----DSSVTK------AGQRVFDILV 312
           A V S A Q  L  D  LD +     ++ HFAEI    D+ + +       GQ V+  L 
Sbjct: 250 ACVPSNASQ-PLIFDWTLDNITSQSYVYMHFAEIQTLKDNDIREFNITYNGGQNVYSYLR 308

Query: 313 NDKNVTRVDIFNSV------GSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYA 366
            +K      +F+S       GSF+          LS T+     +P     LI+GLE Y 
Sbjct: 309 PEKFEIST-LFDSKPLSSPDGSFS----------LSFTKTGNSTLP----PLINGLEIYK 353

Query: 367 LVP-NDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITC-HPNKDETAV 424
           ++   +L T  ++V AM  +K +  +  ++ W GDPCAP ++  WEG+ C +PN D+  +
Sbjct: 354 VLDLLELETDQDEVSAMINIKATYDLSKKVSWQGDPCAPKSYQ-WEGLNCSYPNSDQPRI 412

Query: 425 V 425
           +
Sbjct: 413 I 413

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp\|O81069\|Y2899_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1	Back alignment and function description

>sp\|C0LGG6\|Y5189_ARATH Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2	Back alignment and function description

>sp\|C0LGG4\|Y1518_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2	Back alignment and function description

>sp\|Q9FN94\|RLK7_ARATH Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1	Back alignment and function description

>sp\|Q9FZB8\|Y5181_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1	Back alignment and function description

>sp\|C0LGD8\|Y1755_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1	Back alignment and function description

>sp\|C0LGT5\|Y5169_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1	Back alignment and function description

>sp\|Q9LIG2\|RLK6_ARATH Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1	Back alignment and function description

>sp\|Q9SNA3\|Y3463_ARATH Putative receptor-like protein kinase At3g46340 OS=Arabidopsis thaliana GN=At3g46340 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		434
255566849		674	serine-threonine protein kinase, plant-t	0.926	0.596	0.746	0.0
225423893		630	PREDICTED: Di-glucose binding protein wi	0.976	0.673	0.682	1e-175
449445156		626	PREDICTED: putative leucine-rich repeat	0.953	0.661	0.685	1e-173
449526481		591	PREDICTED: receptor-like protein kinase	0.953	0.700	0.685	1e-173
42562316		628	Di-glucose binding protein with Leucine-	0.917	0.633	0.684	1e-166
12320747		585	hypothetical protein [Arabidopsis thalia	0.917	0.680	0.684	1e-165
356499717		636	PREDICTED: putative leucine-rich repeat	0.914	0.624	0.661	1e-161
356498336		642	PREDICTED: putative leucine-rich repeat	0.926	0.626	0.641	1e-161
357488299		632	Receptor-like protein kinase [Medicago t	0.963	0.661	0.626	1e-156
356574639		626	PREDICTED: probable LRR receptor-like se	0.965	0.669	0.582	1e-143

>gi\|255566849\|ref\|XP_002524408.1\| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi\|223536369\|gb\|EEF38019.1\| serine-threonine protein kinase, plant-type, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/406 (74%), Positives = 352/406 (86%), Gaps = 4/406 (0%)

Query: 27  PYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSS 86
           PY  SY IDCG  T+TTDPFNTTW +D R++T G+TS+VSEPLHFRFP EK LRYFP SS
Sbjct: 19  PYDISYYIDCGGPTNTTDPFNTTWLSD-RFFTGGSTSVVSEPLHFRFPQEKNLRYFPLSS 77

Query: 87  GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDG 146
           GKKNCYI+P LP GRYYIRTFTVYDNYDGK HSPSFDVSVEGTLVFSWRSPW E LARDG
Sbjct: 78  GKKNCYILP-LPNGRYYIRTFTVYDNYDGKLHSPSFDVSVEGTLVFSWRSPWSENLARDG 136

Query: 147 AYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTS 206
           AYSDLF F+ DGE D+CFYS ATDPPVI SLE++Q+DP SYD+ T+GNN ILVNYGRL+ 
Sbjct: 137 AYSDLFTFIDDGEADICFYSIATDPPVIGSLEIRQVDPASYDSITVGNNSILVNYGRLSC 196

Query: 207 GSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSI--KSVTTRERITNTNQPPNYYPMKL 264
           GS QWGPGFSND D+FGRSWQSD   R+P    ++  +S++TRE+I+ T+QPPNY+PMKL
Sbjct: 197 GSVQWGPGFSNDTDNFGRSWQSDLEFRTPTTTKTMAFRSLSTREKISGTDQPPNYFPMKL 256

Query: 265 YQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFN 324
           YQTA+  +GA++Y L VDAKLDYL+WFHFAEIDS+VTK GQRVFD++VNDKN +RVDIF 
Sbjct: 257 YQTAVTGNGALEYELTVDAKLDYLLWFHFAEIDSTVTKKGQRVFDVVVNDKNASRVDIFA 316

Query: 325 SVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRA 384
           +VGSFAAYS+ Y  +NLS+  LTVK+VP +GA LISG+ENYALVPND+ST P+QV AMRA
Sbjct: 317 AVGSFAAYSFSYAVRNLSNGALTVKIVPHIGAPLISGIENYALVPNDISTAPDQVAAMRA 376

Query: 385 LKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMN 430
           LKESLRVPDRMGWNGDPCAPTNWDAWEG+TCHPNK+ TA+VISQ++
Sbjct: 377 LKESLRVPDRMGWNGDPCAPTNWDAWEGVTCHPNKNGTALVISQID 422

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225423893\|ref\|XP_002281668.1\| PREDICTED: Di-glucose binding protein with Leucine-rich repeat domain-like [Vitis vinifera] gi\|297737862\|emb\|CBI27063.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449445156\|ref\|XP_004140339.1\| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449526481\|ref\|XP_004170242.1\| PREDICTED: receptor-like protein kinase At3g21340-like, partial [Cucumis sativus]	Back alignment and taxonomy information

>gi\|42562316\|ref\|NP_564237.2\| Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana] gi\|332192522\|gb\|AEE30643.1\| Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|12320747\|gb\|AAG50525.1\|AC084221_7 hypothetical protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356499717\|ref\|XP_003518683.1\| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max]	Back alignment and taxonomy information

>gi\|356498336\|ref\|XP_003518009.1\| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max]	Back alignment and taxonomy information

>gi\|357488299\|ref\|XP_003614437.1\| Receptor-like protein kinase [Medicago truncatula] gi\|355515772\|gb\|AES97395.1\| Receptor-like protein kinase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356574639\|ref\|XP_003555453.1\| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g16900-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		434
TAIR\|locus:2031175		628	AT1G25570 [Arabidopsis thalian	0.926	0.640	0.679	1.8e-156
TAIR\|locus:2032221		626	RLP4 "receptor like protein 4"	0.880	0.610	0.346	5.5e-54
TAIR\|locus:2094103		519	AT3G19230 [Arabidopsis thalian	0.864	0.722	0.279	1.4e-28
TAIR\|locus:2195855		876	AT1G51910 [Arabidopsis thalian	0.859	0.425	0.274	1.1e-23
TAIR\|locus:2083023		517	AT3G05990 [Arabidopsis thalian	0.843	0.707	0.274	5.8e-20
TAIR\|locus:2078171		883	AT3G46400 [Arabidopsis thalian	0.864	0.424	0.251	3.2e-19
TAIR\|locus:2075316		470	AT3G46270 "AT3G46270" [Arabido	0.721	0.665	0.294	5e-19
TAIR\|locus:2028446		888	AT1G49100 [Arabidopsis thalian	0.866	0.423	0.257	1.3e-18
TAIR\|locus:2195850		890	AT1G51860 [Arabidopsis thalian	0.854	0.416	0.248	1.6e-18
TAIR\|locus:2008565		929	AT1G67720 [Arabidopsis thalian	0.884	0.413	0.253	3e-18

TAIR\|locus:2031175 AT1G25570 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
 Identities = 276/406 (67%), Positives = 335/406 (82%)

Query:    27 PYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSS 86
             P+  S+ IDCGS  ++TD FN TW   D++Y+ G+T++VSEPL F    EKT+RYFP S 
Sbjct:    25 PFNTSFFIDCGSPETSTDVFNRTW-LPDQFYSGGSTAVVSEPLRFHLIAEKTIRYFPLSF 83

Query:    87 GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDG 146
             GKKNCY++P LPPGRYY+RTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPE L RDG
Sbjct:    84 GKKNCYVVP-LPPGRYYLRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPESLLRDG 142

Query:   147 AYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTS 206
             +YSDLFAF+ DGELDLCFYS ATDPP++ SLEV Q+DP SYDA   G N +LVNYGRL+ 
Sbjct:   143 SYSDLFAFIGDGELDLCFYSIATDPPIVGSLEVLQVDPSSYDADGTGQNVLLVNYGRLSC 202

Query:   207 GSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQ 266
             GS+QWGPGF+N  D+FGRSWQSD   RS +++S  +S++T E+I   +Q PNY+PMKLYQ
Sbjct:   203 GSDQWGPGFTNHTDNFGRSWQSDEDFRSEDSRSVARSLSTLEKIKGVDQAPNYFPMKLYQ 262

Query:   267 TAIVSSG--AIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFN 324
             TA+  SG  ++ Y L VDAKLDYL+WFHF+EIDS+V KAGQRVFD++VND NV+RVD+F+
Sbjct:   263 TAVTVSGGGSLVYELEVDAKLDYLLWFHFSEIDSTVKKAGQRVFDLVVNDNNVSRVDVFH 322

Query:   325 SVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRA 384
              VG FAAYS +Y  KNLSST +TVKL  V GA +ISGLENYA+VP D++TVPEQV AM+A
Sbjct:   323 EVGGFAAYSLNYTVKNLSSTIVTVKLSSVSGAPIISGLENYAIVPADMATVPEQVTAMKA 382

Query:   385 LKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQMN 430
             LK+SLRVPDRMGWNGDPCAPT+WDAWEG++C PN   +A+VI Q++
Sbjct:   383 LKDSLRVPDRMGWNGDPCAPTSWDAWEGVSCRPNSQGSALVIFQID 428

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2032221 RLP4 "receptor like protein 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2094103 AT3G19230 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195855 AT1G51910 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2083023 AT3G05990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078171 AT3G46400 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2075316 AT3G46270 "AT3G46270" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2028446 AT1G49100 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195850 AT1G51860 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2008565 AT1G67720 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		434
PLN03150		623	PLN03150, PLN03150, hypothetical protein; Provisio	1e-84
pfam12819		335	pfam12819, Malectin_like, Carbohydrate-binding pro	2e-58
pfam11721		164	pfam11721, Malectin, Di-glucose binding within end	8e-12
pfam11721		164	pfam11721, Malectin, Di-glucose binding within end	1e-07

>gnl\|CDD\|178695 PLN03150, PLN03150, hypothetical protein; Provisional	Back alignment and domain information

 Score =  270 bits (693), Expect = 1e-84
 Identities = 149/432 (34%), Positives = 213/432 (49%), Gaps = 22/432 (5%)

Query: 9   FFFLSLLLVLPLSLASSYPYKASYRIDCGS-ATSTTDPFNTTWQADDRYYTSGATSIVSE 67
               S LL +  SLAS  P+  + RI CG+     T P NT W   D  YT G  +  + 
Sbjct: 5   LLAASALLAVLASLASPEPF--TMRISCGARVNVRTAPTNTLW-YKDFAYTGGIPANATR 61

Query: 68  PLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVE 127
           P  F  P  KTLRYFP S G +NCY I  +P G Y +R F            P FDVSVE
Sbjct: 62  P-SFIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVE 120

Query: 128 GTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSY 187
           GT + S +S W      +  +++   F+ DG   +CF+S     P I S+E+ Q+D  +Y
Sbjct: 121 GTQISSLKSGWSS--HDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIEILQVDDKAY 178

Query: 188 D-AATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDA--ASRSPNAKSSIKSV 244
           +   + G   IL    RL+ G+ +    F  D D  G  W  D            S +++
Sbjct: 179 NFGPSWGQGVILRTAKRLSCGAGK--SKF--DEDYSGDHWGGDRFWNRMQTFGSGSDQAI 234

Query: 245 TTRERITNTNQPPNYYPMKLYQTAIVSSG---AIQYNLAVDAKLDYLIWFHFAEIDSSVT 301
           +T   I   +  PN+YP  LYQ+A+VS+     + Y + VD   +Y +W HFAEID+S+T
Sbjct: 235 STENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSIT 294

Query: 302 KAGQRVFDILVN-DKNVTRVDIFNSVGS-FAAYSWHYVAKNLSSTELTVKLVPVVGA-AL 358
             G+RVFD+L+N D     VDI    G  + A   +     +S   LT+ L P  G  A+
Sbjct: 295 AEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVA-VSGRTLTIVLQPKKGTHAI 353

Query: 359 ISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPN 418
           I+ +E + ++  +  T+ E+V A++ LK SL +P R GWNGDPC P     W G  C  +
Sbjct: 354 INAIEVFEIITAESKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQ-HPWSGADCQFD 412

Query: 419 KDETAVVISQMN 430
             +    I  + 
Sbjct: 413 STKGKWFIDGLG 424

Length = 623

>gnl\|CDD\|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER	Back alignment and domain information

>gnl\|CDD\|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum	Back alignment and domain information

>gnl\|CDD\|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		434
PLN03150		623	hypothetical protein; Provisional	100.0
PF12819		347	Malectin_like: Carbohydrate-binding protein of the	100.0
PF11721		174	Malectin: Di-glucose binding within endoplasmic re	99.84
PF11721		174	Malectin: Di-glucose binding within endoplasmic re	99.68
PLN03150		623	hypothetical protein; Provisional	99.36
PF12819		347	Malectin_like: Carbohydrate-binding protein of the	99.33
KOG3593		355	consensus Predicted receptor-like serine/threonine	97.68
PF08263		43	LRRNT_2: Leucine rich repeat N-terminal domain; In	96.09
KOG3593		355	consensus Predicted receptor-like serine/threonine	93.53

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

Probab=100.00  E-value=4.8e-81  Score=670.48  Aligned_cols=406  Identities=34%  Similarity=0.620  Sum_probs=329.6

Q ss_pred             hhcccccCCCCccEEEccCCCCCc-cCCCCCeEeeCCCCccCCCcccccCCCCCCCcccceeeeeCCCCCCCceEEEeeC
Q 013887           19 PLSLASSYPYKASYRIDCGSATST-TDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNL   97 (434)
Q Consensus        19 ~~~~~~~~~~~~~isIdCG~~~~~-~D~~g~~w~~Dd~~~~~G~~~~i~~~~~~~~~~y~t~R~Fp~~~g~r~cYtlpv~   97 (434)
                      ++.+++++|.+++|+||||++++. +|.+||+|++|.. +..|.......+ ....++|+|+|+||.++|++|||+||+.
T Consensus        13 ~~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~-~~~~~~~~~~~~-~~~~~~~~t~R~F~~~~g~~~cY~~~~~   90 (623)
T PLN03150         13 AVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFA-YTGGIPANATRP-SFIAPPLKTLRYFPLSDGPENCYNINRV   90 (623)
T ss_pred             HhhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCcc-cccCccccccCc-ccccchhhccccCCcccccccceEeeec
Confidence            344444555677799999999876 7789999999643 344433322222 2345789999999987799999999988


Q ss_pred             CCceEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeEEEEEeecCCCCceeEeE
Q 013887           98 PPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASL  177 (434)
Q Consensus        98 ~~g~YlvRl~F~ygnyd~~~~~~~Fdv~lg~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vclv~~~~~~pFIs~i  177 (434)
                      ++|+|||||||+|||||+.++.|.|||++|++.|.+....+..  ....++||+|+.++++.++|||++++.|+||||+|
T Consensus        91 ~~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~--~~~~v~~E~i~~~~~~~l~vcf~~~~~~~pFIs~i  168 (623)
T PLN03150         91 PKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSS--HDEQVFAEALVFLTDGSASICFHSTGHGDPAILSI  168 (623)
T ss_pred             CCCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCccc--CCCcEEEEEEEEecCCcEEEEEecCCCCCCceeEE
Confidence            8999999999999999998888999999999776554322222  23568899999999999999999999999999999


Q ss_pred             EEEEcCCCCccccc-ccccceeeeeecccCCCCCCCCCCCCCCCcC--CCCCcCCCCCCCCCCCCCeeEeeccceeecCC
Q 013887          178 EVQQIDPLSYDAAT-IGNNHILVNYGRLTSGSNQWGPGFSNDADDF--GRSWQSDAASRSPNAKSSIKSVTTRERITNTN  254 (434)
Q Consensus       178 Elr~l~~~~Y~~~~-~~~~~~l~~~~Rin~G~~~~~~~~~y~~D~~--dR~W~~d~~~~~~~~~~~~~~ist~~~i~~~~  254 (434)
                      ||||||+++|.... .+++.+|++++|+|||+......++|++|++  ||+|.+|..|..    ..+..+++...|+++.
T Consensus       169 Ev~~l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~----~~~~~~st~~~I~~~~  244 (623)
T PLN03150        169 EILQVDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGS----GSDQAISTENVIKKAS  244 (623)
T ss_pred             EEEEcCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCC----Cccccccccccccccc
Confidence            99999999996432 2345679999999999865333478999999  999999987763    2355677777787665


Q ss_pred             CCCCCCcHHHHHhhhccC---CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCE-EccccceecccCC-c
Q 013887          255 QPPNYYPMKLYQTAIVSS---GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDK-NVTRVDIFNSVGS-F  329 (434)
Q Consensus       255 ~~~~~~P~~VyqTAr~~~---~~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~-~~~~~di~~~~g~-~  329 (434)
                      +.++.+|+.||||||++.   .+++|.|++++++.|+|||||||++......++|+|+|+|||+ ...++|+....|. .
T Consensus       245 ~~~~~~P~~VyqTA~~~~~~~~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~  324 (623)
T PLN03150        245 NAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERY  324 (623)
T ss_pred             CCCccChHHHhhhhccccCCCCceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcc
Confidence            556779999999999983   4799999999899999999999998544566899999999999 5788998776665 6


Q ss_pred             ceEEEEEEEEecCCceEEEEEeecCCC-ceeeEEEEEEecCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCCcCCCCCC
Q 013887          330 AAYSWHYVAKNLSSTELTVKLVPVVGA-ALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWD  408 (434)
Q Consensus       330 ~~~~~~~~v~~~~~g~l~i~~~~~~~s-p~lNAiEI~~~~~~~~~T~~~Dv~ai~~ik~~~~~~~~~~W~GDPC~P~~~~  408 (434)
                      .++++++.+.. +++.|+|+|+|..++ |+|||||||++.+....|.++|+.||+++|+.++.+...+|+||||.|.. +
T Consensus       325 ~~~~~~~~v~~-~~g~l~isl~p~~~s~pilNaiEI~~~~~~~~~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~-~  402 (623)
T PLN03150        325 TALVLNKTVAV-SGRTLTIVLQPKKGTHAIINAIEVFEIITAESKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQ-H  402 (623)
T ss_pred             cceEEEeEEee-cCCeEEEEEeeCCCCcceeeeeeeeeccccccccCchHHHHHHHHHHhcCCcccCCCCCCCCCCcc-c
Confidence            78888888764 458899999998887 99999999999998888999999999999999987543489999999988 7


Q ss_pred             CCceeeeCCCCCCCcceEEEEecCCC
Q 013887          409 AWEGITCHPNKDETAVVISQMNSSLW  434 (434)
Q Consensus       409 ~W~g~~C~~~~~~~~~~i~~l~LS~~  434 (434)
                      .|.|+.|+.+......+|..|+|++|
T Consensus       403 ~w~Gv~C~~~~~~~~~~v~~L~L~~n  428 (623)
T PLN03150        403 PWSGADCQFDSTKGKWFIDGLGLDNQ  428 (623)
T ss_pred             ccccceeeccCCCCceEEEEEECCCC
Confidence            99999997543323356888888765

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []	Back alignment and domain information

>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan	Back alignment and domain information

>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan	Back alignment and domain information

>PLN03150 hypothetical protein; Provisional	Back alignment and domain information

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []	Back alignment and domain information

>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []	Back alignment and domain information

>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		434
2jwp_A		174	Malectin, MGC80075; sugar binding, sugar binding p	1e-18
2jwp_A		174	Malectin, MGC80075; sugar binding, sugar binding p	4e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174	Back alignment and structure

 Score = 82.3 bits (203), Expect = 1e-18
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 25/159 (15%)

Query: 220 DDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNL 279
           D  G  ++ D         S                  N     LYQT   +  +  Y++
Sbjct: 19  DVHGIHYRKDPLEGRVGRASDYGM-------KLPILRSNPEDQVLYQTERYNEDSFGYDI 71

Query: 280 AVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTR-VDIFNSVGSFAAYSWHYVA 338
            +  + +Y++   FAE+     ++ Q+VFD+ VN   V + +DIF+ VG   A+      
Sbjct: 72  PIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPI 129

Query: 339 KNLSSTELTVKLVPVVGA--------------ALISGLE 363
            ++   +L+V+                       +  L 
Sbjct: 130 -SIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALF 167

PyMOL of 2jwp

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		434
2jwp_A		174	Malectin, MGC80075; sugar binding, sugar binding p	99.95
2jwp_A		174	Malectin, MGC80075; sugar binding, sugar binding p	99.89
2w3j_A		145	Carbohydrate binding module; sugar-binding protein	93.27
1ogq_A		313	PGIP-2, polygalacturonase inhibiting protein; inhi	93.01
2w47_A		144	Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.	92.83
2w47_A		144	Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.	92.48
2vzp_A		127	Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS	92.31
2w87_A		139	Esterase D, XYL-CBM35; plant cell WALL degradation	90.84
2w3j_A		145	Carbohydrate binding module; sugar-binding protein	89.13
2vzp_A		127	Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS	89.11
4eco_A		636	Uncharacterized protein; leucine-rich repeats, pro	87.84
4ecn_A		876	Leucine-rich repeat protein; leucine-rich repeats,	85.7
2wz8_A		156	Cellulosome protein dockerin type I; sugar binding	84.22
3rgz_A		768	Protein brassinosteroid insensitive 1; phytohormon	84.07
2w87_A		139	Esterase D, XYL-CBM35; plant cell WALL degradation	83.47

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*	Back alignment and structure

Probab=99.95  E-value=4.6e-28  Score=219.23  Aligned_cols=153  Identities=22%  Similarity=0.242  Sum_probs=116.4

Q ss_pred             eeeecccCCCCCCCCCCCCCCCcCCCCCcCCCCCCCCCCCCCeeEeeccceeecCCCCCCCCcHHHHHhhhccCCceEEE
Q 013887          199 VNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYN  278 (434)
Q Consensus       199 ~~~~Rin~G~~~~~~~~~y~~D~~dR~W~~d~~~~~~~~~~~~~~ist~~~i~~~~~~~~~~P~~VyqTAr~~~~~lt~~  278 (434)
                      ++++|||||+..    +   .|..+|.|.+|..+...+...   .......+.    ..+.+|+.||||||.+..+++|.
T Consensus         5 ~~~~~INcGg~~----~---~d~~gr~w~~D~~~~~~g~~~---~~~~~~~~~----~~~~~~~~lY~TaR~~~~~~tY~   70 (174)
T 2jwp_A            5 KVIWAVNAGGES----H---VDVHGIHYRKDPLEGRVGRAS---DYGMKLPIL----RSNPEDQVLYQTERYNEDSFGYD   70 (174)
T ss_dssp             HEEEEEEETSSS----E---EETTTEEECSSCSSTTCCCCC---CCCTTSCCS----SSCHHHHHTTTCCCCCCSCEEEE
T ss_pred             cEEEEEECCCCC----c---cCCCCCEEcCCcCcccCCccc---ccccceEec----ccCCCCchhhhhhccCCCCeEEE
Confidence            567999999864    2   256899999998764211111   001111111    11236889999999987789999


Q ss_pred             EEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCE-EccccceecccCCcceEEEEEEEEe------------cCCce
Q 013887          279 LAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDK-NVTRVDIFNSVGSFAAYSWHYVAKN------------LSSTE  345 (434)
Q Consensus       279 ~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~-~~~~~di~~~~g~~~~~~~~~~v~~------------~~~g~  345 (434)
                      |+++++|.|+|||||||+..  .+.++|+|||+|||+ ++++||+..++|+.+|++++|.+..            ..+|+
T Consensus        71 f~v~~~G~Y~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~  148 (174)
T 2jwp_A           71 IPIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGK  148 (174)
T ss_dssp             EECCSCEEEEEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSE
T ss_pred             EEeCCCeEEEEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCe
Confidence            99998899999999999986  458999999999999 6799999988877778888876642            35678


Q ss_pred             EEEEEeecCC-CceeeEEEEEEe
Q 013887          346 LTVKLVPVVG-AALISGLENYAL  367 (434)
Q Consensus       346 l~i~~~~~~~-sp~lNAiEI~~~  367 (434)
                      |+|+|.|... .|+||||||++.
T Consensus       149 L~I~f~p~~~~~a~inaIEI~~~  171 (174)
T 2jwp_A          149 LSVEFVKGYYDNPKVCALFIMKG  171 (174)
T ss_dssp             EEEEEECSSSCSSSEEEEEEESS
T ss_pred             EEEEEeccCCCCcEEEEEEEEeC
Confidence            9999998644 499999999975

PyMOL of 2jwp

>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*	Back alignment and structure

>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}	Back alignment and structure

>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8	Back alignment and structure

>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A	Back alignment and structure

>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A	Back alignment and structure

>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*	Back alignment and structure

>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A	Back alignment and structure

>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}	Back alignment and structure

>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*	Back alignment and structure

>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}	Back alignment and structure

>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}	Back alignment and structure

>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}	Back alignment and structure

>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*	Back alignment and structure

>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		434
d1ogqa_		313	c.10.2.8 (A:) Polygalacturonase inhibiting protein	0.003

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 376 PEQVIAMRALKESLRVPDRM-GWN--GDPCAPTNWDAWEGITCHPNKDETAVV 425
           P+   A+  +K+ L  P  +  W    D C  T    W G+ C  +     V 
Sbjct: 5   PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT----WLGVLCDTDTQTYRVN 53

PyMOL of d1ogqa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		434
d2o14a1		146	Hypothetical protein YxiM {Bacillus subtilis [TaxI	97.62
d2o14a1		146	Hypothetical protein YxiM {Bacillus subtilis [TaxI	97.1
d1ogqa_		313	Polygalacturonase inhibiting protein PGIP {Kidney	96.15

>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: YxiM N-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=97.62  E-value=0.00014  Score=60.81  Aligned_cols=78  Identities=13%  Similarity=0.110  Sum_probs=56.3

Q ss_pred             ceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCE-EccccceecccCCcceEEEEEEEEecCCceEEEEEee
Q 013887          274 AIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDK-NVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVP  352 (434)
Q Consensus       274 ~lt~~~~v~~~~~Y~v~LhFaEi~~~~~~~~~R~FdV~iNg~-~~~~~di~~~~g~~~~~~~~~~v~~~~~g~l~i~~~~  352 (434)
                      ...|+++++ +|.|.|.++|.|..         ..++.++|. .+..+     .|.+  ..+.|.|. +.+|+|+|.|..
T Consensus        64 ~~~f~v~vP-nG~Y~Vtv~~Gd~~---------~~~~~~eg~~~~~~~-----~g~~--~~~~~~V~-VtDG~L~l~ft~  125 (146)
T d2o14a1          64 NNTFNVDLP-NGLYEVKVTLGNTA---------RASVAAEGVFQVINM-----TGDG--AEDTFQIP-VTDGQLNLLVTE  125 (146)
T ss_dssp             SCCEEEECC-SEEEEEEEEESSCS---------EEEEEETTEEEEEEE-----ESTT--CEEEEEEE-ECSSEEEEEEEE
T ss_pred             CceEEEECC-CCeEEEEEEEecCC---------CccEEEeeEEecccc-----CCcc--EEEEEEEE-EECCeEEEEEec
Confidence            467999987 68999999999832         346788887 34322     2332  23446665 689999999976


Q ss_pred             cC-C-CceeeEEEEEEecC
Q 013887          353 VV-G-AALISGLENYALVP  369 (434)
Q Consensus       353 ~~-~-sp~lNAiEI~~~~~  369 (434)
                      .. + .|.||||||-++.+
T Consensus       126 ~~~G~~~~in~l~I~~~~d  144 (146)
T d2o14a1         126 GKAGTAFTLSALKIKKLSD  144 (146)
T ss_dssp             SSTTSCCEEEEEEEEEEES
T ss_pred             CCCCCccEEEEEEEEeccc
Confidence            55 3 49999999999876

PyMOL of d2o14a1

>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}	Back information, alignment and structure