Citrus Sinensis ID: 013901
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 434 | 2.2.26 [Sep-21-2011] | |||||||
| Q70DU8 | 484 | Aldehyde dehydrogenase fa | yes | no | 0.942 | 0.845 | 0.704 | 1e-172 | |
| Q8W033 | 550 | Aldehyde dehydrogenase fa | no | no | 0.944 | 0.745 | 0.636 | 1e-151 | |
| Q8VXQ2 | 479 | Aldehyde dehydrogenase OS | N/A | no | 0.919 | 0.832 | 0.626 | 1e-148 | |
| Q70E96 | 484 | Aldehyde dehydrogenase fa | no | no | 0.917 | 0.822 | 0.453 | 1e-104 | |
| P11883 | 453 | Aldehyde dehydrogenase, d | yes | no | 0.905 | 0.867 | 0.454 | 4e-97 | |
| Q5RF60 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.903 | 0.808 | 0.430 | 1e-93 | |
| P51648 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.903 | 0.808 | 0.430 | 3e-93 | |
| Q60HH8 | 485 | Fatty aldehyde dehydrogen | N/A | no | 0.898 | 0.804 | 0.432 | 6e-93 | |
| P47739 | 453 | Aldehyde dehydrogenase, d | yes | no | 0.912 | 0.874 | 0.448 | 7e-93 | |
| A3RF36 | 453 | Aldehyde dehydrogenase, d | no | no | 0.912 | 0.874 | 0.421 | 4e-92 |
| >sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/409 (70%), Positives = 354/409 (86%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
+VF + AS V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I+GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQAC+SPD+I+TTK+YAPKL++++K ELE FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct: 245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVH+ + L
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTL 413
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/410 (63%), Positives = 335/410 (81%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
K++ F + A+L V ELR F SG+TKSY WR+SQL+++ +M++E+E I +AL QDL
Sbjct: 64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KPELE+ + E++ K+S A+KELK+WM PE KTS+TTFPSSA+IV EP GVVL+IS
Sbjct: 124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 187
WN+PFLLS++PV+GAIAAGNA+VLKPSE+APA+SSLLAKL EY+D ++IRV+EG V E
Sbjct: 184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243
Query: 188 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247
T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct: 244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303
Query: 248 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307
I GKW CN+GQACI D++ITTKD+A KL+++LK ELE F+G+N LESKDLSRIVNS HF
Sbjct: 304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363
Query: 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL +L ++ V+ KIVHGG ++KL+I+PT+LLDVP S +M EEIFGPLLPI+TV K
Sbjct: 364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
IED F +I S KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +HV +
Sbjct: 424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTV 473
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Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/402 (62%), Positives = 325/402 (80%), Gaps = 3/402 (0%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DAE V LR T+ SGKTKSY WRVSQLK+L+K+ + ++V+ALR DL KPE E+
Sbjct: 5 DAEGV---VDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKPEHEA 61
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
++E+ ++ + KSALKEL WM P+K KTS+ T+PSSAEIV EP GVVL+I+ WNYPFL
Sbjct: 62 YVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFL 121
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 194
L+LDP++GAIAAGN +VLKPSE+APA+S+LLAKL+ +Y+D S+IRVVEGAV E ALLDQ
Sbjct: 122 LALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQ 181
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
+WDKI YTG+S+V +IV+++AAKHLTPV+LELGGK P V D+ I+LKVA RR+I KW
Sbjct: 182 RWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISWKWSG 241
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314
N+GQ CISPD+IITT++ APKL++++K ELE+FYGK+PL+S+D+S I+N F R++ LL
Sbjct: 242 NSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLL 301
Query: 315 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374
DD KVS KIV+GG+ DK+ L+IAPT+LLDV DS +MSEEIFGPLLPI+TV KIE+ + I
Sbjct: 302 DDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKI 361
Query: 375 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
I S KPLAAYLFTN+KK ++FV VSAGG+ IND A+H +
Sbjct: 362 IASKPKPLAAYLFTNDKKRTEEFVSNVSAGGITINDIALHFL 403
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Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde. Craterostigma plantagineum (taxid: 4153) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/401 (45%), Positives = 271/401 (67%), Gaps = 3/401 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++E+R TFASG+T+S WR +Q+ ++ +M+ + E I +AL QDL K E+ E+ ++
Sbjct: 12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+ L W P+ +K + +P+ +++ EP+G VL++S WN+P LSLDP++G
Sbjct: 72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN ++LK SE++P +S+ LAK + Y+D +I+V+EG + LL +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 259
G+ ++ RI+MAAAA+HLTPV LELGGK P + D N+K +R+ GKWG NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CIS D+++ K +AP L++ LK +++F+G+NP ES LSRI N +H RLS+LL D +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
IV+GG D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV I++S IIN+
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KPLA Y FTN++ LK + + S+G + ND + + AL
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDAL 412
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/398 (45%), Positives = 257/398 (64%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 246
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L++FYG++ +S+D RI+N HF R+ L+D+ KV+
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+NN+K+ ++ + S+GG+ ND VH+ + L
Sbjct: 363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTL 400
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q5RF60|AL3A2_PONAB Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 255/397 (64%), Gaps = 5/397 (1%)
Query: 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80
L V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K E EV
Sbjct: 3 LEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSEFNVYSQEVI 62
Query: 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPV 140
+ I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L++ P+
Sbjct: 63 TVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPL 122
Query: 141 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKIC 200
+GAIAAGNA+++KPSE++ ++ +LAKL+ +Y+D V+ G V ET+ LL Q++D I
Sbjct: 123 IGAIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIF 182
Query: 201 YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260
YTGN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ C
Sbjct: 183 YTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTC 241
Query: 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320
I+PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 242 IAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA 301
Query: 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 380
GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ + IN K
Sbjct: 302 ----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREK 357
Query: 381 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
PLA Y+F++N KL ++ ++ S+GG+ ND +H ++
Sbjct: 358 PLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFML 394
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Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P51648|AL3A2_HUMAN Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 254/397 (63%), Gaps = 5/397 (1%)
Query: 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80
L V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K E EV
Sbjct: 3 LEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVI 62
Query: 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPV 140
+ I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L++ P+
Sbjct: 63 TVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPL 122
Query: 141 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKIC 200
+GAIAAGNA+++KPSE++ ++ +LAKL+ +Y+D V+ G V ET+ LL Q++D I
Sbjct: 123 IGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIF 182
Query: 201 YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260
YTGN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ C
Sbjct: 183 YTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTC 241
Query: 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320
I+PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 242 IAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA 301
Query: 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 380
GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ + IN K
Sbjct: 302 ----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREK 357
Query: 381 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
PLA Y+F++N KL ++ ++ S+GG+ ND +H +
Sbjct: 358 PLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTL 394
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Catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q60HH8|AL3A2_MACFA Fatty aldehyde dehydrogenase OS=Macaca fascicularis GN=ALDH3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 341 bits (875), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 254/395 (64%), Gaps = 5/395 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ +R F SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + EV +
Sbjct: 5 VQRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSELNAYSQEVITV 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L+ L W+T + K ++ T A I P+P GVVLII WNYPF+L + P++G
Sbjct: 65 LGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQPLGVVLIIGAWNYPFVLIIQPLIG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+++KPSE++ ++ ++AKL+ +Y+D V+ G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAVIIKPSELSENTAKIVAKLLPQYLDQDLYVVINGGVEETTELLKQRFDHIFYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L + CRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++ +K ++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASLQSQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV + +M EEIFGP+LPI+ V ++++ D IN KPL
Sbjct: 302 --LGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPVLPIVPVKNVDEATDFINEREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
A Y+F++N KL ++ ++ S+GG+ ND +H +
Sbjct: 360 ALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTL 394
|
Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47739|AL3A1_MOUSE Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 341 bits (874), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/401 (44%), Positives = 249/401 (62%), Gaps = 5/401 (1%)
Query: 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79
S V R F SGKT+ +RV QL++L +M+NE I AL +L K E S EV
Sbjct: 5 SSIVNRARDAFNSGKTRPLQFRVEQLEALQRMINENLKGISKALASNLRKNEWTSYYEEV 64
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
A + I +K L W E + T I EP GVVL+I WNYPF L++ P
Sbjct: 65 AHVLDEIDFTIKGLSDWAEDEPVAKTRQTQEDDLYIHSEPLGVVLVIGAWNYPFNLTIQP 124
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKI 199
+VGAIAAGNA+VLKPSEV+ + LL+ L+ +YMD V++G V ET+ LL +K+D I
Sbjct: 125 MVGAIAAGNAVVLKPSEVSDHMADLLSTLIPQYMDKDLYPVIKGGVPETTELLKEKFDHI 184
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
YTG++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ
Sbjct: 185 MYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQT 243
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
C++PD+I+ +++E LK L++FYG++ +S D RI+N HF R+ L+D
Sbjct: 244 CVAPDYILCDPSIQNEIVEKLKKSLKDFYGEDAKQSHDYGRIINDRHFQRVINLID---- 299
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
S K+ HGG D+ IAPT+L+DV S +M EEIFGP++PI+ V ++++ IN
Sbjct: 300 SKKVAHGGTWDQPSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLDEAIKFINQRE 359
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KPLA Y+F+NN K+ ++ + S+GG+ ND VH+ + L
Sbjct: 360 KPLALYVFSNNDKVIKKMIAETSSGGVTANDVIVHITVPTL 400
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes and in preventing corneal damage caused by ultraviolet light. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|A3RF36|AL3A1_CANFA Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/401 (42%), Positives = 252/401 (62%), Gaps = 5/401 (1%)
Query: 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79
S V+ R F SGKT+ +R+ QL++L +M+ E E D+ AL DL K E + EV
Sbjct: 5 SEVVQRARAAFNSGKTRPLQFRIQQLEALRRMIKEHEKDLAGALTADLHKNEWNAYYEEV 64
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
+ I+ +K+L W E + + T I EP GVVLII WNYPF +++ P
Sbjct: 65 VYVLEEIEYMIKKLPEWAADEPVEKTPQTQQDECYIHSEPLGVVLIIGTWNYPFTVTIQP 124
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKI 199
+VGAIAAGNA+V+KPSE++ ++LLA ++ +Y+D V+ G + ET+ LL +++D I
Sbjct: 125 MVGAIAAGNAVVIKPSELSENMANLLATIIPQYLDRDLYPVISGGIPETTELLKERFDHI 184
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
YTGN+ V +++M AAAKHLTPV LELGGK+P D +L +ACRR+ GK+ N+GQ
Sbjct: 185 LYTGNTAVGKVIMMAAAKHLTPVTLELGGKNPCYVDKDCDLDIACRRIAWGKF-MNSGQT 243
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
C++PD+I+ +++E LK L+ FYG++ +S+D RI+NS HF R+ L++ KV
Sbjct: 244 CVAPDYILCDPSIQNQIVEKLKKALKEFYGEDAKKSRDYGRIINSRHFQRVMGLMEGQKV 303
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+ +GG D IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN
Sbjct: 304 A----YGGTGDAATRYIAPTILIDVDTQSQVMQEEIFGPVMPIVCVRSLEEAIQFINQRE 359
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KPLA Y+F+ N K+ ++ + S+GG+ ND VHV + +L
Sbjct: 360 KPLALYVFSLNDKMIKKMIAETSSGGVTANDVIVHVSVHSL 400
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Canis familiaris (taxid: 9615) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 434 | ||||||
| 224082306 | 488 | predicted protein [Populus trichocarpa] | 0.949 | 0.844 | 0.768 | 0.0 | |
| 217074984 | 488 | unknown [Medicago truncatula] | 0.953 | 0.848 | 0.775 | 0.0 | |
| 356503028 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.947 | 0.828 | 0.776 | 0.0 | |
| 356552695 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.953 | 0.834 | 0.765 | 0.0 | |
| 255558654 | 495 | Aldehyde dehydrogenase, putative [Ricinu | 0.965 | 0.846 | 0.754 | 0.0 | |
| 356552697 | 487 | PREDICTED: aldehyde dehydrogenase family | 0.949 | 0.845 | 0.754 | 0.0 | |
| 224066815 | 480 | predicted protein [Populus trichocarpa] | 0.940 | 0.85 | 0.762 | 0.0 | |
| 357463521 | 495 | Aldehyde dehydrogenase family 3 member H | 0.963 | 0.844 | 0.713 | 1e-180 | |
| 449449751 | 484 | PREDICTED: aldehyde dehydrogenase family | 0.940 | 0.842 | 0.730 | 1e-177 | |
| 356515906 | 491 | PREDICTED: aldehyde dehydrogenase family | 0.960 | 0.849 | 0.729 | 1e-176 |
| >gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/415 (76%), Positives = 370/415 (89%), Gaps = 3/415 (0%)
Query: 1 MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60
M ++EE +N VFD EAA++ KELR FASGKT+SY WR+SQLKS++KM +E E DIV
Sbjct: 1 MATKEE---ENTVFDVEAANVLTKELRDVFASGKTRSYEWRISQLKSIVKMCDEHEEDIV 57
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
DALRQDL KP+LES +YE+ ++K S A+KELKHWM PEKAKTS+TTFPSSAEIV EP
Sbjct: 58 DALRQDLSKPQLESIVYELTMVKNSCTLAIKELKHWMMPEKAKTSLTTFPSSAEIVSEPL 117
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180
G VLIIS WNYPFLLS+DP++GAIAAGNA+VLKPSEVAPA+SSLLAKL+ EY+D SSI+V
Sbjct: 118 GAVLIISAWNYPFLLSMDPLIGAIAAGNAMVLKPSEVAPATSSLLAKLLPEYLDCSSIKV 177
Query: 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240
VEGAV+ETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGI++
Sbjct: 178 VEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSGIDI 237
Query: 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 300
++A RR+I+GKWGCNNGQACISPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSR
Sbjct: 238 QIATRRIIVGKWGCNNGQACISPDYIITTKDCAEKLVDSLKKELEAFYGKNPLESKDLSR 297
Query: 301 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
IVNSNHF+RL+KLLD+DKVSGKIV+GGERD+ LRIAPT+LL VP++SLIM EEIFGPLL
Sbjct: 298 IVNSNHFSRLTKLLDEDKVSGKIVYGGERDEANLRIAPTILLGVPQNSLIMKEEIFGPLL 357
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
PILTV KIEDSFDII SGTKPLAAYLFTNNKKLK+QF+ +VSAGG+VINDT +H+
Sbjct: 358 PILTVSKIEDSFDIIKSGTKPLAAYLFTNNKKLKEQFLMSVSAGGVVINDTTLHL 412
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217074984|gb|ACJ85852.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/414 (77%), Positives = 366/414 (88%)
Query: 7 TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
+K +VFD + AS VK+LR TF SGKT+SY W+VSQLK+L+++ + E +IV+AL D
Sbjct: 4 SKLNKKVFDLKEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTEKHEKEIVEALYSD 63
Query: 67 LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
L K E ES I EV +LK S K+ALKELKHWM PEK KTSITTFPSSAEIV EPFGVVL+I
Sbjct: 64 LSKSEAESFIQEVGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPFGVVLVI 123
Query: 127 SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 186
S WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+GEYMD SSIRVVEGAV
Sbjct: 124 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNSSIRVVEGAVD 183
Query: 187 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 246
ETSALL QKWDKI YTGN RVARIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR
Sbjct: 184 ETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARR 243
Query: 247 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 306
+I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 244 IIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNH 303
Query: 307 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 366
F RL +LLDDDKVSGKIVHGGE+DK+KLRI+PT+LLDVPRDSLIMSEEIFGPLLPI+TVD
Sbjct: 304 FDRLIRLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVD 363
Query: 367 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
K+++SFD+INS KPLAAY+FTNN KLK+QFV+TVSAGGLVI+DT +H+ + L
Sbjct: 364 KLDESFDVINSAPKPLAAYIFTNNNKLKEQFVKTVSAGGLVIDDTTIHLAVHTL 417
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503028|ref|XP_003520314.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/411 (77%), Positives = 363/411 (88%)
Query: 10 KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
KN FDAEAAS V ELR FAS KT+SY WR+SQL +L K++ E +IVDALR DL K
Sbjct: 16 KNTAFDAEAASRLVNELRRNFASNKTRSYEWRLSQLNALEKLVVVHEQEIVDALRNDLGK 75
Query: 70 PELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPW 129
P LE+ YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS W
Sbjct: 76 PPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAW 135
Query: 130 NYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS 189
NYPFLLSLDPVVGAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S IRVVEGAV ETS
Sbjct: 136 NYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIGDYLDNSCIRVVEGAVDETS 195
Query: 190 ALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249
ALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I
Sbjct: 196 ALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIA 255
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR 309
GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSR+VNSNHF R
Sbjct: 256 GKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNR 315
Query: 310 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 369
L+KLLDDDKVSGKIV+GG++D+NKL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDK+E
Sbjct: 316 LTKLLDDDKVSGKIVYGGQKDENKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLE 375
Query: 370 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
+SFD+INSG KPLAAY+FTNNKKLK+QFV T+SAGGLV+NDT +H+ + L
Sbjct: 376 ESFDVINSGPKPLAAYIFTNNKKLKEQFVMTISAGGLVVNDTTLHLAVHTL 426
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552695|ref|XP_003544698.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/414 (76%), Positives = 364/414 (87%)
Query: 7 TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
T K FDA AAS V ELRG FASGKT+SY WR+ QL ++ K++ + E +IVDALR D
Sbjct: 13 TSSKKSAFDALAASRLVTELRGNFASGKTRSYEWRLLQLNAIAKLVVDHEQEIVDALRND 72
Query: 67 LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
L KP LE+ YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+I
Sbjct: 73 LGKPPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVI 132
Query: 127 SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 186
S WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV
Sbjct: 133 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVD 192
Query: 187 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 246
ETSALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR
Sbjct: 193 ETSALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRR 252
Query: 247 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 306
+I GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 253 IIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNH 312
Query: 307 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 366
F RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVD
Sbjct: 313 FNRLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVD 372
Query: 367 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KIE+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +H+ + L
Sbjct: 373 KIEESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTL 426
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558654|ref|XP_002520352.1| Aldehyde dehydrogenase, putative [Ricinus communis] gi|223540571|gb|EEF42138.1| Aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/420 (75%), Positives = 364/420 (86%), Gaps = 1/420 (0%)
Query: 2 GSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD 61
G E +K +FD E S +KELRG+F SGKT+SY WRV+Q+KSL+K+ + E +IVD
Sbjct: 3 GGNNEEEKAVMLFDVEEGSSMMKELRGSFGSGKTRSYEWRVTQIKSLVKLCDFHEKEIVD 62
Query: 62 ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
ALR DL KPELES++YE+ +LK S + ALKELKHWM PEKAKTSI TFPS+AEIVPEPFG
Sbjct: 63 ALRLDLSKPELESTVYEIGMLKNSCRVALKELKHWMRPEKAKTSIATFPSAAEIVPEPFG 122
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVV 181
VVLIIS WNYPFLLSLDP++GAIAAGNA+VLKPSE+APA+SSLLAKLV Y+D S IRV+
Sbjct: 123 VVLIISAWNYPFLLSLDPLIGAIAAGNAVVLKPSEIAPATSSLLAKLVTAYLDSSCIRVI 182
Query: 182 EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN-L 240
EGAVAETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGIN L
Sbjct: 183 EGAVAETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVIDSGINLL 242
Query: 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 300
A R+I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYG+NPL SKDLSR
Sbjct: 243 ASALLRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKQELERFYGENPLVSKDLSR 302
Query: 301 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
IVNSNHF+RL KLLD+DKVSGKIVHGGERD+ L+IAPT+L+DVP+DSLIM+EEIFGPLL
Sbjct: 303 IVNSNHFSRLIKLLDEDKVSGKIVHGGERDEANLKIAPTILMDVPQDSLIMNEEIFGPLL 362
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
PI+ V+KIE+SFD+INS TKPLAAYLFTN KKLKQQFV VSAGGLV+NDT VH+ + L
Sbjct: 363 PIVMVNKIEESFDLINSRTKPLAAYLFTNKKKLKQQFVTCVSAGGLVVNDTTVHLAVHTL 422
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552697|ref|XP_003544699.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/412 (75%), Positives = 360/412 (87%)
Query: 9 KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLD 68
K +FD+E A + VKELR TF GKT+SY WR+SQLK+++K+ E E I AL DL
Sbjct: 6 KSKALFDSEEALMMVKELRVTFDCGKTRSYEWRISQLKAIIKLTEENEQQIYQALHSDLS 65
Query: 69 KPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
K E E+ + E+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS
Sbjct: 66 KCETEAFVQEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISA 125
Query: 129 WNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188
WNYPFLLSLDPV+GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV ET
Sbjct: 126 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVDET 185
Query: 189 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 248
SALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I
Sbjct: 186 SALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRII 245
Query: 249 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA 308
GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF
Sbjct: 246 AGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFN 305
Query: 309 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDKI
Sbjct: 306 RLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKI 365
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
E+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +H+ + L
Sbjct: 366 EESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTL 417
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224066815|ref|XP_002302229.1| predicted protein [Populus trichocarpa] gi|222843955|gb|EEE81502.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/408 (76%), Positives = 359/408 (87%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
VFD EAA++ KELR FASGKT+SY WR+SQLKS++KM +E E DIVDAL QDL KP+L
Sbjct: 2 VFDVEAANMLTKELRDVFASGKTRSYEWRISQLKSMIKMCDEHEEDIVDALHQDLSKPKL 61
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
ES +YE+ +LK S A+KELK WM PEKAKTS+ TFPSSAEIVPEP GVVLIIS WNYP
Sbjct: 62 ESIVYEITMLKNSCTLAIKELKQWMMPEKAKTSLLTFPSSAEIVPEPLGVVLIISAWNYP 121
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 192
FLLSLDP+VGAIAAGNA+VLKPSE +PA+SSLLAKL+ EY+D+SSI+VVEGAV+ETSALL
Sbjct: 122 FLLSLDPLVGAIAAGNAMVLKPSEFSPATSSLLAKLLPEYLDISSIKVVEGAVSETSALL 181
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
+QKWDKI YTGN V RIVMAAAAKHLTPV+LELGGKSPVV DS I+L++A RR+I GKW
Sbjct: 182 EQKWDKIFYTGNGIVGRIVMAAAAKHLTPVVLELGGKSPVVVDSAIDLQIATRRLIAGKW 241
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 312
GCNNGQAC+SPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSRIVNS HF+RL+K
Sbjct: 242 GCNNGQACVSPDYIITTKDCADKLVDSLKKELETFYGKNPLESKDLSRIVNSKHFSRLTK 301
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 372
LLD+DKVS KIV+GGERD+ L+I+PT+L+DVP DSLIM EEIFGPLLPIL V KIEDSF
Sbjct: 302 LLDEDKVSRKIVYGGERDEANLKISPTILVDVPCDSLIMKEEIFGPLLPILIVSKIEDSF 361
Query: 373 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
D+INSGTKPLAAYLFTNNKKLK+QFV +VSAGG+VIND A+H+ + L
Sbjct: 362 DMINSGTKPLAAYLFTNNKKLKEQFVMSVSAGGVVINDIAMHLAIHTL 409
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463521|ref|XP_003602042.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355491090|gb|AES72293.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/423 (71%), Positives = 367/423 (86%), Gaps = 5/423 (1%)
Query: 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA 62
S E+ +K +FD EAAS VKELR +F+SGKT+SY WR+SQ+K+L+KM++E++ I+DA
Sbjct: 2 SGEDHSQKKVMFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMVDEQQDQIIDA 61
Query: 63 LRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGV 122
LR DL KP LE+ +YE+ + K S + LKELK WM PEKAKTS+TTFPSSAEIVPEP GV
Sbjct: 62 LRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSVTTFPSSAEIVPEPLGV 121
Query: 123 VLIISPWNYPF-----LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
VL+IS WNYPF +LSLDPVVGAIAAGNA+VLKPSE+APASSSLLA L+G YMD SS
Sbjct: 122 VLVISAWNYPFRKSTFVLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSS 181
Query: 178 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237
+RVVEGAV ET+ALL QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSP V DS
Sbjct: 182 VRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSN 241
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD 297
+NL+V RR+I GKW CNNGQACISPD++ITTKD+APKL+++LK ELE+F+GKNP+ES D
Sbjct: 242 VNLEVTARRIISGKWCCNNGQACISPDYVITTKDFAPKLVDALKKELESFFGKNPIESND 301
Query: 298 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFG 357
LSRIV+SNHFARL K+LDDDKVSGKIV+GGE+D++KLRIAPT++LD P+DSLIMSEEIFG
Sbjct: 302 LSRIVSSNHFARLIKMLDDDKVSGKIVYGGEKDESKLRIAPTIVLDAPQDSLIMSEEIFG 361
Query: 358 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
PLLPI+TV+K+E+SFD+IN+GTKPLAAYLFTN+ K K+QFV+ VSAGGL+INDT +H+++
Sbjct: 362 PLLPIITVNKLEESFDVINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVV 421
Query: 418 LAL 420
L
Sbjct: 422 HTL 424
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449449751|ref|XP_004142628.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] gi|449500684|ref|XP_004161167.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/408 (73%), Positives = 356/408 (87%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
VFD EAA V ELR ++ SGKT+SY WR +QLK+L+K++ E E +V + DL KPE
Sbjct: 6 VFDGEAAERVVTELRESYNSGKTRSYEWRENQLKNLLKLVCENEEVMVQTVNSDLHKPEF 65
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
E+ +E+ALLK S K A+KEL+ WM PEK K+SIT FPSSA IVPEPFGVVLIIS WNYP
Sbjct: 66 EAFAHEIALLKGSCKLAIKELRRWMAPEKVKSSITVFPSSAAIVPEPFGVVLIISAWNYP 125
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 192
FLLSLDPVVGAIAAGNA+VLKPSE++P +SSL+AKL+ +Y+D S+++VVEGAV ET ALL
Sbjct: 126 FLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLEKYLDTSAVKVVEGAVPETQALL 185
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
+QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKW
Sbjct: 186 EQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVASRRIIAGKW 245
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 312
GCNNGQACI+PD++ITTK++APKL+E +K ELE FYGKNPLE+KDLSRIVN+NHF RL++
Sbjct: 246 GCNNGQACIAPDYVITTKEFAPKLVECMKQELEKFYGKNPLETKDLSRIVNANHFDRLTR 305
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 372
LLDDDK+SGKIVHGGE+DK+KL+IAPTLLLDVPRDSLIM+EEIFGPLLPILTVDK+EDSF
Sbjct: 306 LLDDDKISGKIVHGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSF 365
Query: 373 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
DI+NSGTKPLAAYLFTNNKKLK++FV +SAGG+ IN+TA+H+ + L
Sbjct: 366 DIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTISTL 413
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356515906|ref|XP_003526638.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 304/417 (72%), Positives = 352/417 (84%)
Query: 1 MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60
M EE +K VFDAE AS VKELR F SG+T+SY WRVSQ+K+L+K + + E IV
Sbjct: 1 MSVEEMQSQKRNVFDAETASSLVKELRDNFGSGRTRSYEWRVSQVKALLKAVVDNEEQIV 60
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
DALR DL KP LE+ +YEV + K S + LKELK WM PEK KTSI TFPSSAEIVPEP
Sbjct: 61 DALRSDLAKPPLETIVYEVGMFKNSCEVILKELKQWMKPEKVKTSIRTFPSSAEIVPEPL 120
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180
GVVL+IS WNYP LLSLDPVVGAIAAGNA+VLKPSE+APASSSLL KL+ +Y D S IRV
Sbjct: 121 GVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLLKLIEKYCDNSFIRV 180
Query: 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240
VEGAV ET+ALL QKWDKI YTGN +V RIVM AAAKHLTPV+LELGGKSPVV DS ++L
Sbjct: 181 VEGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNVDL 240
Query: 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 300
++A RR+I GKWG NNGQACISPD++ITTKD APKL+++LK ELE YGKNPLES+DLSR
Sbjct: 241 QIAARRIISGKWGLNNGQACISPDYVITTKDCAPKLVDALKTELEKCYGKNPLESEDLSR 300
Query: 301 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
IV SNHFARLSKLLDDDKV+GKIV+GGE+D+ KLRIAPTLLLDVPRDSLIM EEIFGPLL
Sbjct: 301 IVTSNHFARLSKLLDDDKVAGKIVYGGEKDEKKLRIAPTLLLDVPRDSLIMGEEIFGPLL 360
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
PI+TV+K+E+S D+INSGTKPLAAY+FT NKKLK+QFV V AGGL++NDT +H+++
Sbjct: 361 PIITVNKVEESIDLINSGTKPLAAYIFTTNKKLKEQFVMNVPAGGLLVNDTVLHLVV 417
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 434 | ||||||
| TAIR|locus:2205851 | 484 | ALDH3H1 "AT1G44170" [Arabidops | 0.942 | 0.845 | 0.689 | 1.4e-151 | |
| TAIR|locus:2116134 | 550 | ALDH3I1 "AT4G34240" [Arabidops | 0.940 | 0.741 | 0.622 | 5.2e-136 | |
| TAIR|locus:2122224 | 484 | ALDH3F1 "AT4G36250" [Arabidops | 0.917 | 0.822 | 0.446 | 5.5e-93 | |
| UNIPROTKB|E2RPP8 | 599 | ALDH3A2 "Uncharacterized prote | 0.905 | 0.656 | 0.432 | 5.4e-86 | |
| RGD|2088 | 453 | Aldh3a1 "aldehyde dehydrogenas | 0.905 | 0.867 | 0.444 | 1.4e-85 | |
| UNIPROTKB|F1NH33 | 490 | ALDH3A2 "Aldehyde dehydrogenas | 0.905 | 0.802 | 0.427 | 2.4e-85 | |
| ZFIN|ZDB-GENE-040912-103 | 490 | aldh3a2b "aldehyde dehydrogena | 0.905 | 0.802 | 0.432 | 2.4e-85 | |
| UNIPROTKB|D4A137 | 507 | Aldh3a2 "Aldehyde dehydrogenas | 0.905 | 0.775 | 0.442 | 3e-85 | |
| RGD|61866 | 484 | Aldh3a2 "aldehyde dehydrogenas | 0.905 | 0.811 | 0.442 | 3.8e-85 | |
| UNIPROTKB|P30839 | 484 | Aldh3a2 "Fatty aldehyde dehydr | 0.905 | 0.811 | 0.442 | 3.8e-85 |
| TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 282/409 (68%), Positives = 344/409 (84%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
+VF + AS V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I+GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQAC+SPD+I+TTK+YAP FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct: 245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVH+ + L
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTL 413
|
|
| TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 254/408 (62%), Positives = 324/408 (79%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
K++ F + A+L V ELR F SG+TKSY WR+SQL+++ +M++E+E I +AL QDL
Sbjct: 64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KPELE+ + E++ K+S A+KELK+WM PE KTS+TTFPSSA+IV EP GVVL+IS
Sbjct: 124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 187
WN+PFLLS++PV+GAIAAGNA+VLKPSE+APA+SSLLAKL EY+D ++IRV+EG V E
Sbjct: 184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243
Query: 188 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247
T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct: 244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303
Query: 248 IMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF 307
I GKW CN+GQACI D++ITTKD+A F+G+N LESKDLSRIVNS HF
Sbjct: 304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363
Query: 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL +L ++ V+ KIVHGG ++KL+I+PT+LLDVP S +M EEIFGPLLPI+TV K
Sbjct: 364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
IED F +I S KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +HV
Sbjct: 424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHV 471
|
|
| TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 179/401 (44%), Positives = 263/401 (65%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++E+R TFASG+T+S WR +Q+ ++ +M+ + E I +AL QDL K E+ E+ ++
Sbjct: 12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+ L W P+ +K + +P+ +++ EP+G VL++S WN+P LSLDP++G
Sbjct: 72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN ++LK SE++P +S+ LAK + Y+D +I+V+EG + LL +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 259
G+ ++ RI+MAAAA+HLTPV LELGGK P + D N+K +R+ GKWG NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251
Query: 260 CISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CIS D+++ K +AP F+G+NP ES LSRI N +H RLS+LL D +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
IV+GG D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV I++S IIN+
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KPLA Y FTN++ LK + + S+G + ND + + AL
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDAL 412
|
|
| UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 172/398 (43%), Positives = 251/398 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
++ +R FASG+++ +R+ QL++L +M+ ERE DI++A+ DL K EL + EV +
Sbjct: 98 IQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGDLCKSELNAYSQEVITV 157
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ L+ L W+ + AK ++ T A + PEP GVVLII WNYPF+L++ P++G
Sbjct: 158 LGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLIIGAWNYPFVLTIQPLIG 217
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+++KPSE++ ++ +LA+L+ Y+D V+ G V ET+ LL Q++D I YT
Sbjct: 218 AIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVEETTELLKQRFDHILYT 277
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L +ACRR+ GK+ N GQ CI+
Sbjct: 278 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRRITWGKY-MNCGQTCIA 336
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ FYG+N ES D RI+N HF R+ LL+ K++
Sbjct: 337 PDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 394
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI+ V +++ INS KPL
Sbjct: 395 --FGGETDEATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVKNADEAIKFINSREKPL 452
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N KL +Q + S+GG+ ND +H + +L
Sbjct: 453 AFYIFSHNDKLVRQMINGTSSGGVTANDVIMHFTLSSL 490
|
|
| RGD|2088 Aldh3a1 "aldehyde dehydrogenase 3 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 177/398 (44%), Positives = 248/398 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 246
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG++ +S+D RI+N HF R+ L+D+ KV+
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+NN+K+ ++ + S+GG+ ND VH+ + L
Sbjct: 363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTL 400
|
|
| UNIPROTKB|F1NH33 ALDH3A2 "Aldehyde dehydrogenase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 170/398 (42%), Positives = 252/398 (63%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V R F+SG+++ +R+ QL++L +M+ E+E +I+ A+ DL K + +E+ +
Sbjct: 8 VGRARAAFSSGRSRPLEFRLQQLRNLQRMVQEKEQEILAAIGADLHKCGHNAYSHEIMGV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ A+++L W P K ++ T A I PEP GVVL+I WNYPF+L + P++G
Sbjct: 68 LGELALAMEKLPSWAAPRPVKKNLLTLRDEAYINPEPLGVVLVIGAWNYPFVLVMQPLIG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+V+KPSEV+ +S ++A ++ +Y+D VV G V ET+ LL+Q++D I YT
Sbjct: 128 AIAAGNAVVVKPSEVSEHTSQMIANILPQYLDPELYPVVTGGVPETTELLEQRFDHILYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GNS V +IVMAAAAKHLTPV LELGGKSP D+ +L VACRR+ GK+ N GQ CI+
Sbjct: 188 GNSAVGKIVMAAAAKHLTPVTLELGGKSPCYIDTDCDLAVACRRIAWGKY-MNCGQTCIA 246
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ FYG++ + D RI+N HF R+ LL+ K++
Sbjct: 247 PDYVLCHPSIQSQVVENIKATLQEFYGEDVKKCPDYERIINKRHFKRIMNLLEGQKIA-- 304
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGGE D+ IAPT+L DV +S +M EEIFGP+LPI++V ++++ + IN KPL
Sbjct: 305 --HGGETDEASCFIAPTILTDVSVESKVMEEEIFGPVLPIVSVKNVDEAIEFINRREKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+NNKKL ++ + S+GG+ ND +H + +L
Sbjct: 363 ALYVFSNNKKLIKRVISETSSGGVTGNDVIMHFFLASL 400
|
|
| ZFIN|ZDB-GENE-040912-103 aldh3a2b "aldehyde dehydrogenase 3 family, member A2b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 172/398 (43%), Positives = 246/398 (61%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ R F +G++KS +R+SQLK+L + + ER+ +I +AL++DL + E +S+YE +
Sbjct: 8 VERARKAFFTGRSKSLEYRISQLKNLQRFMQERQKEIAEALKKDLKRSEFGTSLYETLGV 67
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
++ I ALK+LK W P S+ T I PEP GVVLII WNYP+ +++ P+VG
Sbjct: 68 ESEINLALKKLKEWAAPRPVNKSLMTISDQVYIQPEPLGVVLIIGAWNYPWAVTVGPLVG 127
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA V+KPSEV+ +S ++ + + Y+D VV G V ET LL Q++D I YT
Sbjct: 128 AIAAGNAAVIKPSEVSAHTSKVMEEFLPLYLDKELYPVVTGGVKETQELLKQRFDHIFYT 187
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN V +I+M AAAKHLTP LELGGKSP D +L +ACRR+ GK+ N GQ CI+
Sbjct: 188 GNGMVGKIIMEAAAKHLTPTTLELGGKSPCYIDKDCDLTIACRRIAWGKYS-NCGQTCIA 246
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FY +NP + D RI+N HF RL L++
Sbjct: 247 PDYILCDPSIQDRVIEEIKKNIKEFYTENPQKCPDYGRIINQRHFKRLMSLME----GSS 302
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
I GE ++ + IAPT+L DV D+ +M EEIFGPLLPI+TV+ ++++ IN KPL
Sbjct: 303 IAVSGEHNEAECYIAPTVLRDVKPDAKVMQEEIFGPLLPIVTVNSVDEAIKFINQRDKPL 362
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+++KKL + + S+GGL+ ND +H + +L
Sbjct: 363 ALYIFSSDKKLIDRMIAETSSGGLMANDCLMHFSVSSL 400
|
|
| UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 176/398 (44%), Positives = 250/398 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASLQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N KL ++ ++ S+GG+ ND +H + +L
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSL 397
|
|
| RGD|61866 Aldh3a2 "aldehyde dehydrogenase 3 family, member A2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 176/398 (44%), Positives = 250/398 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N KL ++ ++ S+GG+ ND +H + +L
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSL 397
|
|
| UNIPROTKB|P30839 Aldh3a2 "Fatty aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 176/398 (44%), Positives = 250/398 (62%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ LR TF SG+++ +R+ QL++L +M+ ERE DI+ A+ DL K EL + +EV +
Sbjct: 5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I L L + AK ++ T A + PEP GVVLII WNYPF+L+L P+VG
Sbjct: 65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA ++KPSE++ ++ +LA+L+ +Y+D +V G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
GN+ V +IVM AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG+N S D RI+N HF R+ LL+ K++
Sbjct: 244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
GGE D+ IAPT+L DV +S +M EEIFGP+LPI++V +E++ + IN KPL
Sbjct: 302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N KL ++ ++ S+GG+ ND +H + +L
Sbjct: 360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSL 397
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P51648 | AL3A2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.4307 | 0.9032 | 0.8082 | yes | no |
| P47739 | AL3A1_MOUSE | 1, ., 2, ., 1, ., 5 | 0.4488 | 0.9124 | 0.8741 | yes | no |
| P11883 | AL3A1_RAT | 1, ., 2, ., 1, ., 5 | 0.4547 | 0.9055 | 0.8675 | yes | no |
| Q9I6C8 | CALB_PSEAE | 1, ., 2, ., 1, ., 6, 8 | 0.3349 | 0.9216 | 0.8403 | yes | no |
| P39616 | ALDH2_BACSU | 1, ., 2, ., 1, ., 3 | 0.4096 | 0.8940 | 0.8508 | yes | no |
| Q8VXQ2 | ALDH_CRAPL | 1, ., 2, ., 1, ., 3 | 0.6268 | 0.9193 | 0.8329 | N/A | no |
| Q54DG1 | ALDH3_DICDI | 1, ., 2, ., 1, ., 5 | 0.3979 | 0.8963 | 0.8276 | yes | no |
| Q5RF60 | AL3A2_PONAB | 1, ., 2, ., 1, ., 3 | 0.4307 | 0.9032 | 0.8082 | yes | no |
| Q70DU8 | AL3H1_ARATH | 1, ., 2, ., 1, ., 3 | 0.7041 | 0.9423 | 0.8450 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.2.1.28 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 434 | |||
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 0.0 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 0.0 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 0.0 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 0.0 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-178 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-176 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-163 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-162 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-147 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-140 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-97 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 4e-81 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 6e-74 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 4e-71 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 3e-67 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 3e-56 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-52 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-51 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-48 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 3e-48 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 8e-48 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 3e-47 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 2e-46 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 4e-46 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 4e-46 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 4e-46 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-45 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 3e-45 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-44 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 4e-44 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 9e-44 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 9e-44 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 9e-44 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 3e-43 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 3e-43 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-42 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-41 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-41 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 2e-41 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 3e-41 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 5e-40 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 3e-39 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 5e-39 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 7e-39 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-38 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-38 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-38 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 5e-38 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 6e-38 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-37 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 2e-37 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 4e-37 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 5e-37 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 5e-37 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 2e-36 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 2e-36 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-36 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-36 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 6e-36 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 3e-35 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 8e-35 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-34 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-34 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-33 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-33 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 4e-33 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 5e-33 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 4e-32 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 7e-32 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 1e-31 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 2e-31 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 5e-31 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 5e-31 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-30 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 4e-30 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 5e-30 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 9e-30 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-28 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 6e-28 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 7e-28 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 9e-28 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-27 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 4e-26 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 6e-25 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-24 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-23 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-22 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-22 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 9e-22 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-20 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-18 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-17 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-17 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 5e-17 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 4e-16 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-14 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-14 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-13 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 5e-11 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 4e-10 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-09 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 6e-09 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 8e-09 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 4e-07 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 7e-07 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-06 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-06 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-04 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 0.003 | |
| TIGR01092 | 715 | TIGR01092, P5CS, delta l-pyrroline-5-carboxylate s | 0.004 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 668 bits (1725), Expect = 0.0
Identities = 259/402 (64%), Positives = 322/402 (80%)
Query: 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78
A V+ELR TF SG+T+S WR SQLK L+++++E E DI ALRQDL KP ES E
Sbjct: 1 APRLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDE 60
Query: 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLD 138
V++L +S K A+KELK WM PEK KT +TTFP+ AEIV EP GVVL+IS WN+PFLLSL+
Sbjct: 61 VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLE 120
Query: 139 PVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDK 198
PV+GAIAAGNA+VLKPSE+APA+S+LLAKL+ EY+D +I+V+EG V ET+ALL+QKWDK
Sbjct: 121 PVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDK 180
Query: 199 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258
I +TG+ RV RI+MAAAAKHLTPV LELGGK PV+ DS ++LKVA RR+ GKWGCNNGQ
Sbjct: 181 IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240
Query: 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318
ACI+PD+++ + +AP L+++LKN LE F+G+NP ESKDLSRIVNS+HF RLS+LLDD
Sbjct: 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPS 300
Query: 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378
V+ KIVHGGERD+ L I PT+LLD P DS IM+EEIFGPLLPI+TV KIE+S +IINS
Sbjct: 301 VADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR 360
Query: 379 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
KPLAAY+FT NK+LK++ V S+GG+ NDT V + L
Sbjct: 361 PKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTL 402
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 581 bits (1498), Expect = 0.0
Identities = 287/409 (70%), Positives = 354/409 (86%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
++F A AS+ V ELR +F G T+ Y WRV+QLK LM + + EP+IV ALR DL KPE
Sbjct: 5 KMFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 191
PFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LLAKL+ +Y+D S++RVVEGAV ET+AL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTAL 184
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS +LKV RR+I GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
WGCNNGQACISPD+I+TTK+YAPK+++++K ELE FYGKNP+ESKD+SRIVNS HF RLS
Sbjct: 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLS 304
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
KLLD+ +VS KIV+GGE+D+ L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
FD+I S KPLAAYLFT+NKKLK++F TVSAGG+V+ND AVH+ + L
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTL 413
|
Length = 484 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 567 bits (1465), Expect = 0.0
Identities = 199/398 (50%), Positives = 272/398 (68%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V LR TF +GKT+S WR +QLK+L +ML E E +I AL DL KP E+ + E+A++
Sbjct: 4 VARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I ALK LK WM P + + P+ A ++PEP GVVLII PWNYP L+L P++G
Sbjct: 64 LGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +VLKPSE+APA+S+LLAKL+ +Y D ++ VVEG V +ALL + +D I +T
Sbjct: 124 AIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHIFFT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ V +IVM AAAKHLTPV LELGGKSP + D NL+VA RR+ GK+ N GQ CI+
Sbjct: 184 GSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQTCIA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ + +L+E LK ++ FYG++P ES D RI+N HF RL+ LLDD GK
Sbjct: 243 PDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDD----GK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+V GG+ DK + IAPT+L DV DS +M EEIFGP+LPILT D ++++ + INS KPL
Sbjct: 299 VVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A YLF+ +K ++++ + S+GG+ +ND +H + L
Sbjct: 359 ALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNL 396
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 521 bits (1344), Expect = 0.0
Identities = 191/394 (48%), Positives = 272/394 (69%), Gaps = 5/394 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V++ R F +G TK +R+ QLK L + + + E +I++AL++DL K E E+ + E+ +
Sbjct: 4 VEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ I A+K LK WM P++ KT + FPS + I EP+GVVLII+PWNYPF L+L P++G
Sbjct: 64 LSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN VLKPSE+ P +S ++AK++ E D + VVEG V E LLDQK+D I +T
Sbjct: 124 AIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYIFFT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ RV +IVM AAAKHLTPV LELGGKSP + D NLK+A +R++ GK+ N GQ C++
Sbjct: 184 GSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTCVA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ + K ++ LK E++ FYG++PLES D RI+N HF RL+ LLD+ GK
Sbjct: 243 PDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
IV GG D+ L I PT+L +V D +M EEIFGP+LP+LT D ++++ +II S KPL
Sbjct: 299 IVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
A YLF+ +KK++++ +E +S GG INDT +H+
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLA 392
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 506 bits (1306), Expect = e-178
Identities = 212/394 (53%), Positives = 278/394 (70%), Gaps = 3/394 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V ELR T+ SG+T+S WR SQLK L+++L + E I AL QDL K +E+ EV +L
Sbjct: 12 VAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVL 71
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
S AL LK WM P+KAK + FP++AE+VPEP GVVLI S WN+P LSL+P++G
Sbjct: 72 TKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIG 131
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE+APA+S+ LA + +Y+D +++V+EG A LL KWDKI +T
Sbjct: 132 AIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQLLQHKWDKIFFT 191
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD---SGINLKVACRRMIMGKWGCNNGQA 259
G+ RV RI+M AAAKHLTPV LELGGK P + D S + KVA R++ GKWG GQA
Sbjct: 192 GSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQA 251
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319
CI+ D+++ + +AP L+E LK+ ++ F+G+NP ESK ++RI+N HF RLS LL D +V
Sbjct: 252 CIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRV 311
Query: 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+ IVHGG D+ KL I PT+LL+ P DS IM+EEIFGPLLPI+TV KIEDS INS
Sbjct: 312 AASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKP 371
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
KPLA Y FTNN+KLK++ + S+G + ND +
Sbjct: 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAII 405
|
Length = 484 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 498 bits (1285), Expect = e-176
Identities = 192/398 (48%), Positives = 269/398 (67%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V+ R F+SGKT+ +R+ QL++L++ML E E +IV+AL +DL KP+ E+ + E+ L+
Sbjct: 4 VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
K IK A+ L WM PE K ++ T I EP GVVLII WNYP L+L P+VG
Sbjct: 64 KNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVG 123
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGN +V+KPSEV+PA++ LLA+L+ +Y+D VV G V ET+ LL Q++D I YT
Sbjct: 124 AIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYIFYT 183
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVM AAAKHLTPV LELGGKSP D ++ VA RR+ GK+ N GQ CI+
Sbjct: 184 GSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTCIA 242
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+++ T + K +E+LK L+ FYG++P ES D RI+N HF RL KLL GK
Sbjct: 243 PDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS----GGK 298
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ GG+ D+ + IAPT+L DV +M EEIFGP+LPI+TV+ ++++ + INS KPL
Sbjct: 299 VAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPL 358
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+NNKK+ + + S+GG+ +NDT +H + +L
Sbjct: 359 ALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSL 396
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 465 bits (1198), Expect = e-163
Identities = 190/394 (48%), Positives = 257/394 (65%), Gaps = 4/394 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
LR TF SGKTK +R+ QLK L + + E IV+AL++DL +P E+ + EV+ +
Sbjct: 11 HSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGV 70
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTF-PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVV 141
K I LK LK W EK K F I EP GVVLII PWNYP LL+L P+V
Sbjct: 71 KNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLV 130
Query: 142 GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICY 201
GAIAAG +VLKPSE+ P +++LLA+LV +Y+D + +VV+G V ET+ALL+QK+DKI Y
Sbjct: 131 GAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKFDKIFY 190
Query: 202 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 261
TG+ RV RI+ AAAKHLTPV LELGGKSPV+ +L++A +R++ GK+G N GQ C+
Sbjct: 191 TGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQICV 249
Query: 262 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 321
+PD+++ + +E LK L+ FY S D +RIVN HF RL LLD K G
Sbjct: 250 APDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK--G 307
Query: 322 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 381
K+V GGE D+ I PT++ DV D +MSEE+FGP+LPI+ VD ++++ +INS P
Sbjct: 308 KVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTP 367
Query: 382 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
LA Y+FT++K + +GG+VINDT +HV
Sbjct: 368 LALYIFTDDKSEIDHILTRTRSGGVVINDTLIHV 401
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 464 bits (1197), Expect = e-162
Identities = 179/402 (44%), Positives = 267/402 (66%), Gaps = 3/402 (0%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ E VK+L+ +F +GKT+ +R QL++L++ML E + + +A+ +DL + E+
Sbjct: 5 NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFET 64
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ EV L I+ LK L ++ PEK T P + I+PEP GVVL+I WNYP
Sbjct: 65 KMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLN 124
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 194
L+L P+ GAIAAGN +VLKPSE++P +S L+AKL+ +Y+D S +RV+EG V T+ LL +
Sbjct: 125 LTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKE 184
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
+D I +TG+ RV ++VM AAA++LTP LELGGKSPV+ D NLKVA RR+ GK+
Sbjct: 185 PFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL- 243
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314
N GQ C++PD+++ + K +E+LK ++ F+G++P +S+D SRIVN H RL++L+
Sbjct: 244 NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELI 303
Query: 315 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374
D GK+V+GGE D +APT++++ DS +M EEIFGP+LPILT + I++ +
Sbjct: 304 KDHG--GKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEF 361
Query: 375 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
INS KPLA Y F +K+ K+ +E S+G +VIND H++
Sbjct: 362 INSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLL 403
|
Length = 493 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 425 bits (1095), Expect = e-147
Identities = 169/408 (41%), Positives = 243/408 (59%), Gaps = 13/408 (3%)
Query: 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP 70
VF A + + + + R+++LK L K + R +I+ AL D KP
Sbjct: 1 RRVFAA---------QQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP 51
Query: 71 ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWN 130
E + E+ + + I A+K LK WM P++ +T + F + ++I EP GV LIISPWN
Sbjct: 52 AAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWN 111
Query: 131 YPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSA 190
YPF L+ P+V AIAAGN +LKPSE+ P +S+++AK++ E D + V EG A
Sbjct: 112 YPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQA 171
Query: 191 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
LL+ +D I +TG+ V +IVMAAAAKHL V LELGGKSP + D +LK A +++ G
Sbjct: 172 LLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFA 308
K+ N GQ CI+PD++ + +E LK E+E FYGK+ S DL+RIVN HF
Sbjct: 232 KF-LNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFD 290
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
RL LLDD G K+ GG+ D + IAPT+L +V D IM EEIFGP+LPI+T +
Sbjct: 291 RLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
+++ + IN+ KPLA Y+F+ +K + + S+GG+V+ND +H
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHF 398
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 406 bits (1047), Expect = e-140
Identities = 145/389 (37%), Positives = 220/389 (56%), Gaps = 13/389 (3%)
Query: 37 SYGWRVSQLKSLMKMLNEREPDIVDALRQDL-DKPELESSIYEVALLKTSIKSALKELKH 95
S R +L L +L + + + +A+ D + E+ + E+ IK A K LK
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 96 WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
WM P + + P+ AE+ +P GVV II PWNYP L+L P++ A+AAGN +++KPS
Sbjct: 78 WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137
Query: 156 EVAPASSSLLAKLVGEYMDLSSIRVVEGAV---AETSALLDQKWDKICYTGNSRVARIVM 212
E P +S+LLA+L+ EY D + VV G A S+L +D + +TG++ V R VM
Sbjct: 138 EFTPRTSALLAELLAEYFDEDEVAVVTGGADVAAAFSSL---PFDHLLFTGSTAVGRHVM 194
Query: 213 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 272
AAA++LTPV LELGGKSP + +L A R+ GK N GQ C++PD+++ +D
Sbjct: 195 RAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL-NAGQTCVAPDYVLVPEDK 253
Query: 273 APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH----GGE 328
+ + + K + Y ++ D + I+N H+ARL LL+D + G V GE
Sbjct: 254 LEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE 312
Query: 329 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
++ PTL+L+V D +M EEIFGP+LPILT D ++++ D IN+ +PLA Y F
Sbjct: 313 DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFG 372
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVHVIM 417
+K + + + +GG+ INDT +HV
Sbjct: 373 EDKAEQDRVLRRTHSGGVTINDTLLHVAQ 401
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 1e-97
Identities = 122/402 (30%), Positives = 200/402 (49%), Gaps = 12/402 (2%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
V R F + R + L+ L +L ER ++ + KP +E ++ EVA
Sbjct: 4 VAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARA 62
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + + A + EP GVV I+PWN+P LL+ +
Sbjct: 63 ADTFRYYAGLARRLHGEVIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAP 119
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKI 199
A+AAGN +VLKPSE+ P ++ LLA+L+ E + + VV G E A L + DKI
Sbjct: 120 ALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKI 179
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
+TG++ V + +M AAA++L V LELGGKSP++ +L A + + G +G N GQ
Sbjct: 180 SFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQV 238
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDK 318
C + ++ + + +E L ++ NPL+ D+ ++++ R+ ++D K
Sbjct: 239 CTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAK 298
Query: 319 VSG-KIVHGGERDKNKLR--IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 375
G K++ GG+R + + PT+L DV D I EEIFGP+LP++ E++ ++
Sbjct: 299 AEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELA 358
Query: 376 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417
N LAA +FT + + + E + AG + IND +V
Sbjct: 359 NDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEP 400
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 4e-81
Identities = 123/410 (30%), Positives = 189/410 (46%), Gaps = 13/410 (3%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D +AA V R F + S R + L+ + +L R ++ + + KP E+
Sbjct: 37 DVDAA---VAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEA 93
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
E+A I+ +E + +T T S A + EP GVV I+PWN+P
Sbjct: 94 RG-EIARAADFIRYYAEEARRLE----GETIPTDKGSKALVRREPLGVVGAITPWNFPLA 148
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
L+ + A+AAGN +VLKPSE P S+ LA+L E + + VV G AE L
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALV 208
Query: 193 -DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
D I +TG++ V R + AAAA +L PV LELGGKSP + +L A + G
Sbjct: 209 AHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGA 268
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARL 310
+ N GQ C + +I + + +E L + +PL S DL +++ R+
Sbjct: 269 FF-NAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRV 327
Query: 311 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
++D G + G + + PT+L V D I EEIFGP+LP++ E+
Sbjct: 328 EGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEE 387
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
+ ++ N LAA +FT + + + AG + IND + L
Sbjct: 388 AIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYL 437
|
Length = 472 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 6e-74
Identities = 112/389 (28%), Positives = 174/389 (44%), Gaps = 65/389 (16%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F + R + L+ + +L ER ++ + KP +E ++ EVA + + A
Sbjct: 7 FKAWAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTFRYA 65
Query: 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
PE A + EP GVV +I+PWN+P LL+ + A+AAGN
Sbjct: 66 AGLADKLGGPE---LPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNT 122
Query: 150 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSR 206
+VLKPSE+ P ++ LA+L+ E + + VV G E A L + DKI +TG++
Sbjct: 123 VVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTA 182
Query: 207 VARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
V + +M AAA++L PV LELGGKSPV+ D +L A + G + N GQ C +
Sbjct: 183 VGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA--- 238
Query: 267 ITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHG 326
SR+ +VH
Sbjct: 239 --------------------------------SRL---------------------LVHE 245
Query: 327 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
D+ ++ T+L+DV D I EEIFGP+LP++ E++ + N L A +
Sbjct: 246 SIYDEFVEKLV-TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGV 304
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAVHV 415
FT + + E + AG + IND+++ V
Sbjct: 305 FTRDLNRALRVAERLRAGTVYINDSSIGV 333
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 4e-71
Identities = 115/374 (30%), Positives = 186/374 (49%), Gaps = 16/374 (4%)
Query: 51 MLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP 110
+L ER ++ + + KP E+ EV +++ + + E +
Sbjct: 63 LLEERRDELAELETLETGKPLAEARG-EVPRAIDTLRYYAGLARK-LEGETLPSDPGVL- 119
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
A EP GVV I+PWN+P LL+ + A+AAGN +VLKPSE+ P ++ LLA+L
Sbjct: 120 --AYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFE 177
Query: 171 EYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
E L + VV G+ +E L DK+ +TG++ V R + AAAK+L V LEL
Sbjct: 178 E-AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLEL 236
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK+P +VFD +L A + G +G N GQ C + ++ + + +E L +
Sbjct: 237 GGKNPLIVFDDA-DLDAAVEGAVFGAFG-NAGQVCTAGSRLLVHESIYDEFVERLVEAAK 294
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-IAPTLLL 342
+ +PL+ D+ +++ R+ ++D K G K++ GGE K + PT+L
Sbjct: 295 SLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLA 354
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DV D I EEIFGP+L ++ +++ ++ N LAA +FTN+ + + +
Sbjct: 355 DVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLE 414
Query: 403 AGGLVINDTAVHVI 416
AG + IND
Sbjct: 415 AGMVWINDYTTGDP 428
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 220 bits (564), Expect = 3e-67
Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 10/386 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R +L + L + ++ + L + KP ++ + EV L +I A + + P
Sbjct: 42 RAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVLLALEAIDWAARNAPRVLAPR 100
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
K T + A + P+GVV +ISPWNYP L + ++ A+AAGNA+VLKPSEV P
Sbjct: 101 KVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHL 219
LLA+ ++VV G A +AL+D DK+ +TG+ R VMAAAA+ L
Sbjct: 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERL 220
Query: 220 TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG--CNNGQACISPDHIITTKDYAPKLL 277
PV+LELGGK P++ + +L+ A + WG N GQ CIS + + + + +
Sbjct: 221 IPVVLELGGKDPMIVLADADLERAAAAAV---WGAMVNAGQTCISVERVYVHESVYDEFV 277
Query: 278 ESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKL 334
L + G + + D+ + + + + +DD G K + GG R +
Sbjct: 278 ARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGP 337
Query: 335 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394
PT+L DVP D +M EE FGP+LP++ V +++ + N L+A +F+ +
Sbjct: 338 FYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARA 397
Query: 395 QQFVETVSAGGLVINDTAVHVIMLAL 420
+ + AG + IND + + AL
Sbjct: 398 EAIARRLEAGAVSINDVLLTAGIPAL 423
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 3e-56
Identities = 120/385 (31%), Positives = 191/385 (49%), Gaps = 20/385 (5%)
Query: 45 LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT 104
L+SL+K + E + +I +D K +++S+ E+ + I+ LK + + PE
Sbjct: 46 LRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPG 105
Query: 105 SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164
+ F A + EP GVV I WNYPF L P++ A+ AGNA+V+K SE SS
Sbjct: 106 GLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGF 165
Query: 165 LAKLV-------GEYMDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAA 216
++ G DL +++V AL D I + G+ V + VMAAAA
Sbjct: 166 FLSIIRECLAACGHDPDL--VQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAA 223
Query: 217 KHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK 275
+ LTPV+LELGGK P +V D +L ++ G + ++GQ CI + +I + K
Sbjct: 224 ESLTPVVLELGGKDPAIVLDD-ADLDQIASIIMRGTFQ-SSGQNCIGIERVIVHEKIYDK 281
Query: 276 LLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER---- 329
LLE L + ++ PL+ D+ +++ F RL +L+ D G +++ GG+R
Sbjct: 282 LLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHP 341
Query: 330 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
PTLL+DV D I EE+FGP++ ++ E++ +I NS L A +F
Sbjct: 342 EYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFG 401
Query: 389 NNKKLKQQFVETVSAGGLVINDTAV 413
+ K ++ + G + IND V
Sbjct: 402 KDIKRARRIASQLETGMVAINDFGV 426
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 1e-52
Identities = 106/315 (33%), Positives = 166/315 (52%), Gaps = 18/315 (5%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
+ A +V EP GVVL I+PWN P +L + +AAGN +VLK SE++P + L+ ++
Sbjct: 90 TLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH 149
Query: 171 E------YMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL 223
E +++ + E A AL+ K+ +TG++RV RI+ AAKHL PVL
Sbjct: 150 EAGLPKGVLNVVTHSP-EDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVL 208
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGGK+P +V + +L A + G + N+GQ C+S + II + A + +E LK
Sbjct: 209 LELGGKAPAIVLEDA-DLDAAANAALFGAF-LNSGQICMSTERIIVHESIADEFVEKLKA 266
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPT 339
E + L +V++ R+ +L+DD G K+V GG D++ + PT
Sbjct: 267 AAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPT 322
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
+L +V D I SEE FGP++ I+ V E++ I N L+A +FT + +
Sbjct: 323 ILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAK 382
Query: 400 TVSAGGLVINDTAVH 414
+ +G + IN VH
Sbjct: 383 RIESGAVHINGMTVH 397
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 1e-51
Identities = 94/323 (29%), Positives = 161/323 (49%), Gaps = 22/323 (6%)
Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
PS + P GVV +ISP+N+P +L++ V A+A GNA+VLKP P +
Sbjct: 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVT 140
Query: 162 SSLL-AKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA 216
LL A++ E L + VV G +E L + I +TG++ V R + A
Sbjct: 141 GGLLIAEIF-EEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG 199
Query: 217 KHLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
+HL V LELGG +P++ D+ ++L V+ G + + GQ C++ I+ +
Sbjct: 200 RHLKKVALELGGNNPLIVLDDADLDLAVSA--AAFGAF-LHQGQICMAAGRILVHESVYD 256
Query: 275 KLLESLKNELENF-YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 331
+ +E L + + G +P + + ++N R+ +++D +G +++ GG +
Sbjct: 257 EFVEKLVAKAKALPVG-DPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEG 315
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ PT+L DV D I EEIFGP+ P++ D E++ ++ N L+A +FT +
Sbjct: 316 LFYQ--PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDL 373
Query: 392 KLKQQFVETVSAGGLVINDTAVH 414
+ F E + G + IND V+
Sbjct: 374 ERAMAFAERLETGMVHINDQTVN 396
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 1e-48
Identities = 86/283 (30%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV II+PWN+PFL+ + A+AAG +V+KPSE ++ +LA+L+ E +
Sbjct: 115 VLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174
Query: 174 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ +V G A + D + +TG++RV + + AAAA++L V LELGGK+P
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
+ + +L A ++ G + N G+ C S ++ + A + ++ +
Sbjct: 235 QIVFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGD 293
Query: 292 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD--KNKLRIAPTLLLDVPRD 347
PL + I+N A+++ +D + G ++ GGER L PT+ DV D
Sbjct: 294 PLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPD 353
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
I EEIFGP+L +LT D ++++ + N L+A +++ +
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKD 396
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 170 bits (434), Expect = 3e-48
Identities = 104/327 (31%), Positives = 159/327 (48%), Gaps = 30/327 (9%)
Query: 107 TTFPSSA-----EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
T PS A ++ +P GVV I+PWN+P + + A+AAG +VLKP+E P S
Sbjct: 100 RTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLS 159
Query: 162 SSLLAKL---------VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI 210
+ LA+L V + VV G+ AE L + KI +TG++ V ++
Sbjct: 160 ALALAELAEEAGLPAGV--------LNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKL 211
Query: 211 VMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 269
+MA AA + V LELGG +P VFD +L A I K+ N GQ C+ + I
Sbjct: 212 LMAQAADTVKRVSLELGGNAPFIVFDD-ADLDKAVDGAIASKFR-NAGQTCVCANRIYVH 269
Query: 270 KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 327
+ + +E L ++ N L+ D+ ++N ++ L++D G K++ GG
Sbjct: 270 ESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGG 329
Query: 328 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
+R PT+L DV D LIM+EE FGP+ PI+ D ++ N LAAY+
Sbjct: 330 KRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYV 389
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAV 413
FT + + E + AG + IN +
Sbjct: 390 FTRDLARAWRVAEALEAGMVGINTGLI 416
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 8e-48
Identities = 92/318 (28%), Positives = 154/318 (48%), Gaps = 13/318 (4%)
Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
T PS + V P GVV I+P+NYP +L+ V A+AAGN +VLKPSE P
Sbjct: 102 ETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVI 161
Query: 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 218
+A+++ E + VV G AE L D + + +TG++ V R + A +H
Sbjct: 162 GLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRH 221
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
L + LELGGK+P++ + +L A R G + + GQ C+S II + + ++
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVK 280
Query: 279 SLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 336
+P + + +++ R+ + ++D G K++ GG+ D N
Sbjct: 281 KFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN--FY 338
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
PT+L DV D I EE FGP+ ++ E++ ++ N L+A + TN+ + +
Sbjct: 339 QPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFK 398
Query: 397 FVETVSAGGLVINDTAVH 414
E + +G + IND +
Sbjct: 399 LAERLESGMVHINDPTIL 416
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 3e-47
Identities = 123/420 (29%), Positives = 189/420 (45%), Gaps = 44/420 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
AE V+ R F K + R L+++ + + ER ++ + +D KP E+
Sbjct: 17 TAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA 76
Query: 75 SI----------YEVAL---LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
+ Y L L F A + EP G
Sbjct: 77 AWDVDDVAGCFEYYADLAEQLDAK------------AERAVPLPSEDF--KARVRREPVG 122
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 180
VV +I+PWN+P L++ V A+AAG +VLKPSE+ + LA++ E + + V
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNV 182
Query: 181 VEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVF-DS 236
V G E A L DKI +TG++ VM AAA+ + PV LELGGKSP +VF D+
Sbjct: 183 VTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDA 242
Query: 237 GINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
+ V M GC NNGQ C + ++ + A LE L E +PLE
Sbjct: 243 DLEKAV---EWAMF--GCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 349
L +V+ + ++ + K G +++ GG R + + IAPT+ DVP DS
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EEIFGP+L + + +++ + N LAA + + + + + E + AG + IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 2e-46
Identities = 100/302 (33%), Positives = 148/302 (49%), Gaps = 14/302 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDL 175
EP GV I PWN+P L+ + A+AAGN +VLKP+E P S+ LA+L+ E +
Sbjct: 140 EPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPP- 198
Query: 176 SSIRVVEG--AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 231
+ +V G A +A+ DKI +TG++ V R +M AAAK +L V LELGGKSP
Sbjct: 199 GVVNIVPGFGPTA-GAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSP 257
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L A G + N GQ C + I + + +E K E
Sbjct: 258 NIVFDDA-DLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315
Query: 291 NPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRD 347
+P + V+ F ++ ++ K G ++ GGER +K I PT+ DV D
Sbjct: 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDD 375
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I EEIFGP++ IL ++ + N LAA +FT + + + AG +
Sbjct: 376 MKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVW 435
Query: 408 IN 409
+N
Sbjct: 436 VN 437
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 4e-46
Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 10/299 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLS 176
EP GVV I+P+N+P L V AIAAGNA+VLKP+ P S+ LA+L+ E +
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKG 181
Query: 177 SIRVVEGAVAET-SALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
++ VV G+ AL+ D + I +TG+ V + A L V LELG + V+
Sbjct: 182 ALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIV 239
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
D+ +L+ A R + G + N GQ CIS I +D + LE + +PL
Sbjct: 240 DADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMS 352
E D+ +++ R+ + +++ G +++ GG+RD L PT+L DVP D ++
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAIL--EPTVLTDVPPDMKVVC 356
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411
EE+F P++ + D ++++ + N L A +FTN+ + + + GG++IND+
Sbjct: 357 EEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDS 415
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 4e-46
Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 10/300 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
P GVV I PWN+PF L + A+ GN +V+KPSE P ++ A+LV E L +
Sbjct: 132 VPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDE-AGLPA 190
Query: 178 --IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ +V G + L K I TG++ + +M AAA+++T V LELGGK+P +
Sbjct: 191 GVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAI 250
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L +A + ++ + N GQ C + + +D + +E L +++ +P
Sbjct: 251 VMKDADLDLAVKAIVDSRII-NCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPF 309
Query: 294 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPTLLLDVPRDSL 349
++ D+ +VN ++ ++++ +G ++ GG+R + + PT+L +V +D
Sbjct: 310 DAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDME 369
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I+ EEIFGP+LP++ ++++ ++ N L +Y++T N + + G IN
Sbjct: 370 IVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYIN 429
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 4e-46
Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 10/304 (3%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V EP GVV I PWN P +L+ + A+ AGN +VLK +E AP + LLA+++ + +
Sbjct: 114 VREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVLPA 173
Query: 176 SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ V+ G E A L DK+ +TG++ V +I+ AAA L PV LELGGKSP++
Sbjct: 174 GVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMI 233
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L A I G GQ+C + + +D LE L +L +PL
Sbjct: 234 VFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPL 293
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGE-----RDKNKLRIAPTLLLDVP 345
E+ D+ I++ FA++ +D ++ GG + + PT+ V
Sbjct: 294 DEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVD 353
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
+ + EEIFGP+L + ++ + N LAAY++T + + + AG
Sbjct: 354 NEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGW 413
Query: 406 LVIN 409
+ +N
Sbjct: 414 VQVN 417
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-45
Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 18/379 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW---M 97
R++ L+ +L +R + + + KP ++ + EV +++ A +E +
Sbjct: 45 RMAILERAADLLKKRAEEFAKIIACEGGKP-IKDARVEVDRAIDTLRLAAEEAERIRGEE 103
Query: 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157
P A A + EP GVVL I+P+N+P L + AIA G +VLKP+
Sbjct: 104 IPLDATQGSDN--RLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161
Query: 158 APASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 214
P S+ LAK++ G + + E V + D++ + +TG++ V + A
Sbjct: 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221
Query: 215 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYA 273
A + LELGG +PV+ D +L A + G G + GQ CIS I ++
Sbjct: 222 AGG--KRIALELGGNAPVIVDRDADLDAAIEALAKG--GFYHAGQVCISVQRIYVHEELY 277
Query: 274 PKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDK 331
+ +E+ ++ +PL+ D+ +++ R+ + +++ + +++ GGERD
Sbjct: 278 DEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG 337
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ PT+L DVPRD+ + +EE FGP++PI+ D E++ I NS L A +FT +
Sbjct: 338 ALFK--PTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDL 395
Query: 392 KLKQQFVETVSAGGLVIND 410
+ + E + GG+++ND
Sbjct: 396 NVAFKAAEKLEVGGVMVND 414
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 3e-45
Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 19/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
+P GV +I+PWN P +L + A+A GN +VLKPSE P ++ LLA+L E +
Sbjct: 116 QPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPG 175
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G E A L D I +TG + R +M AAA +L PV LELGGK+P +V
Sbjct: 176 VVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235
Query: 234 FDSGINLKVACR---RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
F +L A R NNG+ C++ I+ + + LE +
Sbjct: 236 FADA-DLDRAVDAAVRSSFS----NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVG 290
Query: 291 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 343
+PL ++ +++ H ++ ++ + G I+ GG R + + PT++
Sbjct: 291 DPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITG 350
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
+ DS + EEIFGP++ ++ D E++ ++ N LAAY++T + + + A
Sbjct: 351 LDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEA 410
Query: 404 GGLVIN 409
G + +N
Sbjct: 411 GTVWVN 416
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 2e-44
Identities = 124/408 (30%), Positives = 196/408 (48%), Gaps = 32/408 (7%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLN--EREPDIVDALRQ-DLDKPELESSIYEV 79
VK R F S +K G +L L K+ + E+ D++ A+ D KP +++ ++
Sbjct: 51 VKAARKAFESWWSKVTGEERGEL--LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDL 108
Query: 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
I + ++ W + KT T+ A + EP+GV I PWNYP ++
Sbjct: 109 D----EIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET-SALLDQ-KW 196
+ A+AAGN +V+KP+E P S A LV E + ++ G A SAL +
Sbjct: 165 LAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDV 224
Query: 197 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC- 254
DKI +TG++ R+VM AAA++L V LE GGKSP +VF+ +L A KW
Sbjct: 225 DKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDA-DLDQAV------KWAAA 277
Query: 255 ----NNGQACISPDHIITTKDYAPKLLESLKNEL-ENFYGKNPLESK-DLSRIVNSNHFA 308
N+GQ C + I + K +E + +N+ +P + + V+ +
Sbjct: 278 GIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYD 337
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
R+ ++ K G K+V+GGE+ L I PT+ DVP+D I+ EEIFGP++ I
Sbjct: 338 RVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVIS 397
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411
E++ N T LAA +FT + + + + AG + IN +
Sbjct: 398 KFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSS 445
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 4e-44
Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 15/294 (5%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
P++ E +P EP GVV I+PWNYP +++ + A+AAGN +VLKPSE P +
Sbjct: 101 PAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL 219
+ LLA+L E + + VV G A L + + TG+ R + V AAA L
Sbjct: 161 TLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTL 220
Query: 220 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
V LELGGK+PV VFD +L A + + N GQ C + + + + +
Sbjct: 221 KRVHLELGGKAPVIVFDD-ADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVA 278
Query: 279 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRI 336
+L + G E ++ + ++ R++ ++ +++ GG R +
Sbjct: 279 ALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFY 338
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PT++ V +D I+ EEIFGP++ + D +++ ++ N LA+ ++T +
Sbjct: 339 EPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRD 392
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 9e-44
Identities = 103/308 (33%), Positives = 152/308 (49%), Gaps = 19/308 (6%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V EP GV I PWNYP ++ V A+AAGNA+V+KP+E AP ++ LA+L E L
Sbjct: 114 VREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEE-AGL 172
Query: 176 --SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ VV G AE A L D I +TG+ VM AAA+++ PV LELGGKSP
Sbjct: 173 PAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSP 232
Query: 232 -VVF---DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
+VF D L V +I N GQ C + ++ + ++LE L
Sbjct: 233 QIVFADADLEAALPVVVNAIIQ-----NAGQTCSAGSRLLVHRSIYDEVLERLVERFRAL 287
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLL 342
LE DL ++++ R+ + + G +IV GG + +APTLL
Sbjct: 288 RVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLD 347
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DVP DS + EEIFGP+L ++ D ++ + N L A ++T + + +
Sbjct: 348 DVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLR 407
Query: 403 AGGLVIND 410
AG + +N+
Sbjct: 408 AGQVFVNN 415
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 9e-44
Identities = 109/374 (29%), Positives = 179/374 (47%), Gaps = 23/374 (6%)
Query: 52 LNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK-----ELKHWMTPEKAKTSI 106
L ER +IV+ L ++ ++++I E + A E + + K +
Sbjct: 67 LEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENR 125
Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
+ EP GVV +ISPWN+P LS+ V A+A GNA+VLKP+ P + LL
Sbjct: 126 --------VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLL 177
Query: 167 KLVGEYMDLSS--IRVVEGAVAET-SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPV 222
+ E L + VV GA +E A ++ + I +TG++ V R + A +HL V
Sbjct: 178 AKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237
Query: 223 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGG +P V ++ A + GK+ + GQ C++ + II +D + +E
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVE 296
Query: 283 ELENFYGKNPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTL 340
++ +P + + ++N + L ++ G ++ GGE + N L PT+
Sbjct: 297 RVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL--EPTV 354
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
L DV D I EEIFGP+ PI+ D E++ ++ N L+ +FT++ + QF
Sbjct: 355 LSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARR 414
Query: 401 VSAGGLVINDTAVH 414
+ AG IND V+
Sbjct: 415 IDAGMTHINDQPVN 428
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 9e-44
Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 7/304 (2%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A V EP GVV I+P+N+P L + AIA GN++V+KPS P ++ LAK++ E
Sbjct: 117 AFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA 176
Query: 173 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ I VV G +E + + K + I +TG++ V ++ + A V LELGG
Sbjct: 177 GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGS 236
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P++ +L+ A + G++ N GQ C + I+ ++ K L+ L +++
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKV 295
Query: 290 KNPL-ESKDLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347
+PL ES DL +++ R+ L++D + GKI++GG+RD+ PT+L + D
Sbjct: 296 GDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSF-FPPTVLENDTPD 354
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
++M EE+FGP+LPI V E++ +I NS L A +FTN+ + + AGG+V
Sbjct: 355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414
Query: 408 INDT 411
IND+
Sbjct: 415 INDS 418
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 3e-43
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P GVV +ISP+N+P +L++ V A+A GNA+VLKP P S ++ + E L +
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169
Query: 178 -IRVVEGAVAETSAL-LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ V+ G AL D I +TG++ V R V AA +HL V LELGGK+ ++
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 295
+L +A G + + GQ C++ + + A L + ++ +P
Sbjct: 230 DDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATG 288
Query: 296 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 353
+ L ++N+ R+ ++DD +G ++ GG D L PT+L V E
Sbjct: 289 QVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYD--GLFYRPTVLSGVKPGMPAFDE 346
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
EIFGP+ P+ D E++ + N L+A + + + + + G L IND V
Sbjct: 347 EIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTV 406
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 3e-43
Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 13/289 (4%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P + EP GVV I+PWN+PF L+L + A+AAGN +VLKP+ P S+ LL +++
Sbjct: 114 PGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII 173
Query: 170 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
E DL + + VV G+ L D + D + +TG++ V R +MA AA L VLLE
Sbjct: 174 AE-TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLE 232
Query: 226 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 284
LGGKS +V D +L A + N GQ C ++ + +++E+L
Sbjct: 233 LGGKSANIVLD-DADLAAAAPAAVGV-CMHNAGQGCALTTRLLVPRSRYDEVVEALAAAF 290
Query: 285 ENFYGKNPLESKDLS-RIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPT 339
E +P + + ++++ R+ + + G ++V GG R + + PT
Sbjct: 291 EALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPT 350
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
L DV D I EEIFGP+L ++ D +++ I N L+ +++
Sbjct: 351 LFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWS 399
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 1e-42
Identities = 95/299 (31%), Positives = 150/299 (50%), Gaps = 9/299 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GVV I PWN+P + + V A+AAGN +VLKP+E+ P S+ +A+L+ E
Sbjct: 116 EPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAG 175
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G A L DKI +TG++ V R +M AA +L V LELGGKS +V
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
F +L A R G + N GQ C + ++ + + LE + + +PL
Sbjct: 236 FADA-DLDAAVRAAATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293
Query: 294 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 350
+ K + +V+ F R+ +D + G +++ GG+R + + PT+ VP + I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EEIFGP++ ++ E++ I N LAA ++T + + + AG + IN
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN 412
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-41
Identities = 97/306 (31%), Positives = 148/306 (48%), Gaps = 13/306 (4%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
EP GVV I+PWN P LL + A+AAGN +VLKPSE PAS+ LAKL E
Sbjct: 116 RREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFP 175
Query: 175 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ VV G ET L + KI +TG + R + AAA++L PV LELGGKSP
Sbjct: 176 PGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPN 235
Query: 233 -VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
VFD +L A ++ G + GQ C++ ++ + + +E L +
Sbjct: 236 IVFDDA-DLDAAVNGVVAGIFA-AAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGD 293
Query: 292 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLDV 344
PL+ + + + ++ + + + G +++ GGER PT+L DV
Sbjct: 294 PLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADV 353
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D I EE+FGP+L ++ D E++ + N LAA ++T + + + AG
Sbjct: 354 TNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAG 413
Query: 405 GLVIND 410
+ +N
Sbjct: 414 TVWVNT 419
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-41
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 13/310 (4%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
+ EP GVV I PWN+P L++ + A+AAGN +VLKP+ P S +L +L+G+
Sbjct: 130 SYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL 189
Query: 173 MDLSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
+ + VV G +E L K+ +TG++ V R++M AA++L PV LELGGKS
Sbjct: 190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKS 249
Query: 231 P-VVFDSGINLKVA-CRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELEN 286
P + FD ++ + G+ G N G+ C P + + + +E E
Sbjct: 250 PNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEA 309
Query: 287 FYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPT 339
NPL+ + + V+ + ++ +D K G +++ GGER PT
Sbjct: 310 IKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPT 369
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
L+ D I EEIFGP+L ++T E++ I N L ++T + +
Sbjct: 370 LIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVAR 429
Query: 400 TVSAGGLVIN 409
+ G + +N
Sbjct: 430 GIQTGRVWVN 439
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 2e-41
Identities = 112/418 (26%), Positives = 186/418 (44%), Gaps = 43/418 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A V R F + S R + L+ + + R ++ A+ ++ P +
Sbjct: 37 DVDRA---VAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLA 93
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+V L +++A LK ++ +V EP GV +I+PWN+P
Sbjct: 94 RAAQVGLGIGHLRAAADALK--------DFEFEERRGNSLVVREPIGVCGLITPWNWPLN 145
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
+ V A+AAG +VLKPSEVAP S+ +LA+++ E L + +V G L
Sbjct: 146 QIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDE-AGLPAGVFNLVNGDGPVVGEAL 204
Query: 193 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
D + +TG++R + V AAA + V LELGGKS ++ D +L+ A R +
Sbjct: 205 SAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDA-DLEKAVPRGVA 263
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFA 308
+ N+GQ+C +P ++ + + E E + +P + L + ++ F
Sbjct: 264 ACFA-NSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQF- 321
Query: 309 RLSKLLDDDKVSGKI----------VHGG-ERDKNKLR---IAPTLLLDVPRDSLIMSEE 354
D+V G I V GG R + R + PT+ DV D I EE
Sbjct: 322 --------DRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREE 373
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412
IFGP+L I+ D +++ I N LA Y+++ + + + + AG + IN A
Sbjct: 374 IFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA 431
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 3e-41
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
PS A + EP GV + I WNYP ++ + A+AAGNA+V KPSE P ++ +A+++
Sbjct: 124 PSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIM 183
Query: 170 GEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
E + VV+G AE LL K+ +TG + +MAAAA HL V +EL
Sbjct: 184 EEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMEL 243
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGKSP +VFD +L+ A ++G + + GQ C + + K + L L E
Sbjct: 244 GGKSPLIVFDDA-DLESAVDGAMLGNF-FSAGQVCSNGTRVFVHKKIKERFLARLVERTE 301
Query: 286 NFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-----LRIAP 338
+P E+ ++ ++++ H ++ ++ K G + GG R +N + P
Sbjct: 302 RIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEP 361
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ D D I+ EEIFGP++ +LT ++ N LA +FT + +
Sbjct: 362 TVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVA 421
Query: 399 ETVSAGGLVIND 410
+ + AG + IN
Sbjct: 422 DQLEAGTVWINT 433
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 5e-40
Identities = 127/420 (30%), Positives = 198/420 (47%), Gaps = 42/420 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYG-----WRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
D +AA V+ R F K K + R L+++ + ER+ ++ D K
Sbjct: 46 DVDAA---VEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGK 102
Query: 70 P--ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSI----TTFPSSAEIVPEPFGVV 123
P E + +VA + L K K + TF ++ EP GVV
Sbjct: 103 PLDEAAWDMDDVAGCFEYYADLAEALD-----AKQKAPVSLPMETFKGY--VLKEPLGVV 155
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE 182
+I+PWNYP L++ V A+AAG VLKPSE+A + LA + E + + VV
Sbjct: 156 GLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVT 215
Query: 183 GAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGIN 239
G E A L DKI +TG++ R +M AAA+ + PV LELGGKSP +VFD ++
Sbjct: 216 GLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDD-VD 274
Query: 240 LKVACRRMIMGKW---GC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
L A +W GC NGQ C + ++ + A + LE L +N +PLE
Sbjct: 275 LDKAV------EWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLE 328
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 349
L +V+ + ++ K + K G I+ GG+R ++ + I PT++ DV
Sbjct: 329 EGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQ 388
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EE+FGP+L + T +++ ++ N LA + +N+ + ++ E AG + IN
Sbjct: 389 IWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWIN 448
|
Length = 503 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 3e-39
Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 28/328 (8%)
Query: 108 TFPSS-----AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162
T PS+ E EP GVV +I+PWN+P + + A+A GN +V KP+E+ PAS+
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 163 SLLAKLVGEY--------MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 214
L +++ E + + S V A+ E + D + +TG++ V R + AA
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDV-----DAVSFTGSTAVGRRIAAA 233
Query: 215 AAKHLTPVLLELGGKSP-VVFDSG-INLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 272
AA V LE+GGK+P VV D ++L V C + G + + GQ C + +I T+
Sbjct: 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVEC--AVQGAFF-STGQRCTASSRLIVTEGI 290
Query: 273 APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 330
+ +E+L + + L+ D+ +V+ + + ++ + G K+V+GGER
Sbjct: 291 HDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL 350
Query: 331 KNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 387
K +AP L V D I EEIFGP+ ++ V +++ I N L+A +
Sbjct: 351 KRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIV 410
Query: 388 TNNKKLKQQFVETVSAGGLVINDTAVHV 415
T + K F V AG +++N V
Sbjct: 411 TTSLKHATHFKRRVEAGVVMVNLPTAGV 438
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 5e-39
Identities = 105/415 (25%), Positives = 172/415 (41%), Gaps = 67/415 (16%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F + + S+ R + L+ L +L ER+ ++ + ++ KP + + EV K
Sbjct: 11 AFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKP-IAEARAEVE------KC 63
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
A + + ++ E I T A + EP GVVL I PWN+PF
Sbjct: 64 AWICRYYAENAEAFLADEP----IETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAP 119
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDL-SSIRVVEGAVAETSALLDQ 194
+ AGN ++LK + P + + +L G + +L VE +A D
Sbjct: 120 NLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA------DP 173
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINL----KVACR-RMI 248
+ + TG+ R R V A A K+L +LELGG P +V D +L K A + R+
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA-DLDKAVKTAVKGRLQ 232
Query: 249 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-----------YGKNPLESKD 297
N GQ+CI+ I +D + LE + G PL KD
Sbjct: 233 ------NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLG--PLARKD 284
Query: 298 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEI 355
L L + +++ +G ++ GG+R D PT+L DV EE+
Sbjct: 285 L--------RDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEEL 336
Query: 356 FGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
FGP+ ++ V E++ + N L +FT + + ++ + AG + IN
Sbjct: 337 FGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING 391
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 7e-39
Identities = 95/304 (31%), Positives = 151/304 (49%), Gaps = 13/304 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYP ++ A+A GNA+V KPS P ++ LLA+++ E +
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
VV+G ET LL + D K+ +TG+ + VM+AAAK + V LELGGKSP++
Sbjct: 175 VFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLII 233
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
+L+ A +M + + GQ C + + + + E L + +PL
Sbjct: 234 FDDADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLD 292
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLR----IAPTLLLDVPR 346
E + +++ H ++ ++ K G K++ GGER ++ L ++P +L D
Sbjct: 293 EDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTD 352
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D E+ N T LAA +FT + + + + + AG
Sbjct: 353 DMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412
Query: 407 VIND 410
IN
Sbjct: 413 WINT 416
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 1e-38
Identities = 101/304 (33%), Positives = 153/304 (50%), Gaps = 18/304 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I PWN+P L+ + A+AAGN +VLKPSE+ P S+ + KL+ E
Sbjct: 143 EPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPG 202
Query: 177 SIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-V 232
I VV G + DK+ +TG++ V R VM AAAK +L V LELGGKSP +
Sbjct: 203 VINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNI 262
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL-----KNELENF 287
VFD +L+ A G + N+GQ C + I + K ++ K ++ +
Sbjct: 263 VFDDA-DLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDP 320
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH-GGERDKNK-LRIAPTLLLDVP 345
+ ++ + +S+I + R+ ++ K G V GG+R N+ I PT+ DV
Sbjct: 321 FAEDTFQGPQVSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVT 376
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
D I+ EEIFGP++ ++ E++ N T LAA +FTNN + + AG
Sbjct: 377 EDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGT 436
Query: 406 LVIN 409
+ +N
Sbjct: 437 VWVN 440
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 2e-38
Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 20/298 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E + L
Sbjct: 71 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE-IGLPKG 129
Query: 178 -IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--V 232
+V G L + K + TG+ +MAAAAK++T V LELGGK+P V
Sbjct: 130 VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIV 189
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ D+ ++L V + I+ N+GQ C + + K + + L ++ NP
Sbjct: 190 MDDADLDLAV---KAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 246
Query: 293 LESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 348
E D++ ++N+ R+ + + G ++ GG+ + K PTLLLDV ++
Sbjct: 247 AERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEM 306
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-----KKLKQ-QFVET 400
IM EE FGP+LP++ D +E++ + N L + ++T N K +K +F ET
Sbjct: 307 SIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGET 364
|
Length = 409 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 2e-38
Identities = 94/306 (30%), Positives = 154/306 (50%), Gaps = 9/306 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ +P GVV I+PWN+P + V A+AAG +V+KPSE+ P ++ A+L + +
Sbjct: 156 VLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGI 215
Query: 174 DLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ VV G A ALL K KI +TG++ V + +MA AA + V LELGG +P
Sbjct: 216 PPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAP 275
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L VA + + K+ N+GQ C+ + I+ + K E+ ++
Sbjct: 276 FIVFDDA-DLDVAVKGALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVG 333
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-APTLLLDVPRD 347
+ E ++N ++ + D G K++ GG+R PT+L DV D
Sbjct: 334 DGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTED 393
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
LI EE+FGP+ P+ E++ I N LAAY+FT + + + E + G +
Sbjct: 394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG 453
Query: 408 INDTAV 413
+N+ +
Sbjct: 454 VNEGLI 459
|
Length = 498 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 5e-38
Identities = 88/292 (30%), Positives = 148/292 (50%), Gaps = 19/292 (6%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A I EP GVV + PWN+P L++ + A+AAGN++VLKP+E +P ++ LA+L E
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALE- 176
Query: 173 MDLSSI-----RVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLL 224
+ + VV G AL L D + +TG++ V R + + + +L V L
Sbjct: 177 ---AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 225 ELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
E GGKSP +VF +L A G + N G+ C + ++ + + LE +
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFW-NQGEVCSAGSRLLVHESIKDEFLEKVVAA 292
Query: 284 LENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAP 338
+ +PL+ + + +V+ HF ++ ++ K G ++V GG+R + + P
Sbjct: 293 AREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEP 352
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T+ V D I EEIFGP+L ++T D E++ + N LAA ++T++
Sbjct: 353 TVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSD 404
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 6e-38
Identities = 93/286 (32%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
++ EP GVV I PWN+PFL++ + A+AAGN +V+KPS S LAK++ + +
Sbjct: 132 VLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLP 191
Query: 175 LSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ +V G +++ LL+ DK+ +TG++ V R V AAAK L P LELGGKS
Sbjct: 192 KGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSAN 251
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ N A +G N GQ C + I + + + LK + EN NP
Sbjct: 252 IIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP 310
Query: 293 LE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER------DKNKLRIAPTLLLDV 344
L+ + VN + ++ +D K G KI+ GG R DK I PTL+++V
Sbjct: 311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFF-IEPTLIVNV 369
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
D + EEIFGP+ ++ ++ D+ N L +FT +
Sbjct: 370 TNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKD 415
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 1e-37
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 15/309 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP+GVV I +N+P + + + +AAGN +V+KP E AP S+ LA+L E +
Sbjct: 115 EPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGV 174
Query: 178 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
++ G A A L +I G+ R +M AAA+ + V LELGGK+ ++
Sbjct: 175 FNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234
Query: 236 SGINLKVACRRMIMG---KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ + A + G W GQ+C S + + ++L + + +P
Sbjct: 235 PDADPEAAADAAVAGMNFTW---CGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDP 291
Query: 293 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL-----RIAPTLLLDVP 345
+ + +V+ + R+ +D K G ++V GG R + + PT+ DV
Sbjct: 292 TDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT 351
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EEIFGP+L +L + N L A ++TN+ + V AG
Sbjct: 352 PGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGY 411
Query: 406 LVINDTAVH 414
+ IN ++ H
Sbjct: 412 VWINGSSRH 420
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 2e-37
Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 15/308 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
V EP GV +I+PWNYP L + + A+AAGN +V+KPSEV P ++ L +L+ E
Sbjct: 130 TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEE-AG 188
Query: 175 L--SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
L + +V G+ A A L D + +TG + R +M AAA ++ V LELGGK+
Sbjct: 189 LPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKN 248
Query: 231 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P +VF + + A + + G + N GQ C + ++ + K + +L +
Sbjct: 249 PNIVFADA-DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKL 306
Query: 290 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLL 342
N L ++ +V++ H ++ + K G ++V GG+R ++L + PT+
Sbjct: 307 GNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFD 366
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
DV R I+ EEIFGP+L + D E++ + N LA ++T + + +
Sbjct: 367 DVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLR 426
Query: 403 AGGLVIND 410
AG + IND
Sbjct: 427 AGTVWIND 434
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 4e-37
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 11/301 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV +I+PWN+P + + A+ GN +V KP+E PA + L +L E +
Sbjct: 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGV 194
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ VV G E L + D + +TG++ V + A+ V LE+GGK+P++
Sbjct: 195 VNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVM 254
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 295
+L +A + +G GQ C + +I + + L+ + + L+
Sbjct: 255 DDADLDLALEGALWSAFG-TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDE 313
Query: 296 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLLDVPRDS 348
+ D+ ++N ++ + K G ++ GGER + PT+ DV D
Sbjct: 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDM 373
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
I EEIFGP++ ++ V +E++ +I N L++ ++T + + + AG +
Sbjct: 374 RIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYV 433
Query: 409 N 409
N
Sbjct: 434 N 434
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 139 bits (354), Expect = 5e-37
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 21/264 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P GVV I PWN+P LL+ + A+ AGN +VLKPS P + L +L E + +
Sbjct: 114 PLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVLPPGVL 173
Query: 179 RVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFD 235
VV G E L KI +TG++ + VMA+AAK L V LELGG +V
Sbjct: 174 NVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232
Query: 236 SGINLKVACRRMIMGKWGCNNGQACIS------PDHIITTKDYAPKLLESLKNELENFYG 289
+++ ++ G + N+GQ C + + I Y + E+L +
Sbjct: 233 -DVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHESI-----YD-EFCEALVALAKAAVV 284
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPR 346
+ L+ L + N + ++ +L++D K G K++ GGE I PT++ D P
Sbjct: 285 GDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPE 344
Query: 347 DSLIMSEEIFGPLLPILTVDKIED 370
S I+ EE FGP+LP+L ++
Sbjct: 345 GSRIVDEEQFGPVLPVLKYSDEDE 368
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 5e-37
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 14/305 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P GV +ISPWN+P + A+ GN +VLKP+E P ++ L +++ E +
Sbjct: 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPG 224
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGG 228
+ + G E L I +TG+ V + AAK L V+ E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
K+ ++ D +L A ++ +G GQ C + +I + + LE L +
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQ-GQKCSACSRVIVHESVYDEFLERLVERTKALK 343
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLLLDV 344
+P + + + +++ R+ + ++ K G+++ GGE + + PT+ DV
Sbjct: 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADV 403
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
P D + EEIFGP+L ++ +++ +I N L +F+ + + ++ G
Sbjct: 404 PPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVG 463
Query: 405 GLVIN 409
L N
Sbjct: 464 NLYAN 468
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 2e-36
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 12/325 (3%)
Query: 96 WMTPEKAKTSITTFPS------SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
W T +T + PS +A EP GVV I PWN+ ++++ + A+A G
Sbjct: 113 WATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCT 172
Query: 150 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRV 207
+V+KPSE P + +A+L E + + VV G A + L+ K+ +TG+
Sbjct: 173 IVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232
Query: 208 ARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
+ + AA LT V LELGGK+ F ++ ++ + + GQ C +P+
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFY 291
Query: 268 TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 325
+ +L+ LK L +F +P+ ES + N HF ++ LDD + G +IV
Sbjct: 292 VHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVR 351
Query: 326 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 384
GGE + PTL+L DS +M EE FGP++ + + E+ +IN L A
Sbjct: 352 GGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTA 411
Query: 385 YLFTNNKKLKQQFVETVSAGGLVIN 409
++TNN +++ + AG + +N
Sbjct: 412 SVWTNNLSKALRYIPRIEAGTVWVN 436
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 2e-36
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 11/324 (3%)
Query: 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
+ + P + + +I + P GVV +ISPWNYP L++ + A+ AGNA+VLK
Sbjct: 94 ERLLKPRRRRGAIPVLTRTTVNR-RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLK 152
Query: 154 PSEVAPASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 210
P ++ +L+ G DL + G+ A++D D + +TG++ R+
Sbjct: 153 PDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEV-GGAIVDNA-DYVMFTGSTATGRV 210
Query: 211 VMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
V A + L LELGGK+P++ +L A + + N GQ C+S + I +
Sbjct: 211 VAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFS-NAGQLCVSIERIYVHE 269
Query: 271 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329
+ + L+ D+ +++ R++ +DD G V G R
Sbjct: 270 SVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329
Query: 330 ---DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
D PT+L V D + +EE FGP++ I V +++ ++ N L A +
Sbjct: 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASV 389
Query: 387 FTNNKKLKQQFVETVSAGGLVIND 410
+T + ++ + AG + +N+
Sbjct: 390 WTRDGARGRRIAARLRAGTVNVNE 413
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 2e-36
Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 18/306 (5%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P G V +I+PWN PF+LS + A+A GN +VLKP+E +P +++ LA++ E L
Sbjct: 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKE-AGLPDG 193
Query: 178 -IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-V 233
+V G E L D + +TG + I+M A L +ELGGKSPV V
Sbjct: 194 VFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIV 253
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
FD +L+ A ++ + NG+ C + ++ + A +E L + +PL
Sbjct: 254 FDDA-DLERALDAVVFMIFS-FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPL 311
Query: 294 E-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR--------IAPTLLLD 343
+ ++ +++ H A++ ++ + G I+ GGER + PT+
Sbjct: 312 DPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTG 371
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EEIFGP+L ++ E++ + N LA Y++TN+ + + A
Sbjct: 372 ADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEA 431
Query: 404 GGLVIN 409
G + +N
Sbjct: 432 GMIWVN 437
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 3e-36
Identities = 102/379 (26%), Positives = 170/379 (44%), Gaps = 32/379 (8%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F + + + R S L+ ++ E + D+ + + KP L+ + E+ + ++
Sbjct: 31 AFKTWRATTAKERSSLLRKWYNLMMENKDDLARLITLENGKP-LKEAKGEILYAASFLE- 88
Query: 89 ALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGA 143
W E + T PS ++ +P GV I+PWN+P + A
Sbjct: 89 -------WFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAA 141
Query: 144 IAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVE-GAVAETSALLDQK 195
+AAG +V+KP+E P S+ LA+L G ++ R E G V TS L+
Sbjct: 142 LAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVR-- 199
Query: 196 WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC 254
KI +TG++ V +I+M +A + V +ELGG +P +VFD +L A + K+
Sbjct: 200 --KISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA-DLDQAVEGAMASKFR- 255
Query: 255 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKL 313
N GQ C+ + + + + L ++ N L+ ++N ++ K
Sbjct: 256 NAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKH 315
Query: 314 LDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
+ D G K+V GG+R + PT+L +V D L+ EE FGPL P+ D E+
Sbjct: 316 IADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEV 375
Query: 372 FDIINSGTKPLAAYLFTNN 390
I N LAAY F+ +
Sbjct: 376 IAIANDTEVGLAAYFFSRD 394
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 6e-36
Identities = 97/418 (23%), Positives = 176/418 (42%), Gaps = 34/418 (8%)
Query: 13 VFDAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQ 65
+ + ASL +R + GW R + + +++L +I + L
Sbjct: 9 IAERPLASLE--AVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTW 66
Query: 66 DLDKPELESSIYEVALLKTSIKSALKELKHWM--TPEKAKTSITTFPSSAE--IVPEPFG 121
+ +P +A I+ L+ ++ + E E I EP G
Sbjct: 67 QMGRP--------IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLG 118
Query: 122 VVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL---VGEYMDLSSI 178
VVLII+PWNYP+L +++ V+ A+ AGNA++LK S P A G +
Sbjct: 119 VVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGV--F 176
Query: 179 RVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237
+V+ + ++AL+ D + +TG+ R + AAA V LELGGK P
Sbjct: 177 QVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK- 296
+L A ++ G + N+GQ+C S + I + +E+ ++ + +PL+
Sbjct: 237 ADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPST 295
Query: 297 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-----IAPTLLLDVPRDSLIM 351
L +V++ + + D G + + +APT+L +V +M
Sbjct: 296 TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVM 355
Query: 352 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EE FGP++ I+ V ++ ++N L A ++T + + E + G + +N
Sbjct: 356 REETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 3e-35
Identities = 85/297 (28%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
+ + EP GVV I PWN P L+ + A+AAG +VLKPS P + LLA
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184
Query: 167 KLVGEYMDLSSIRVVEGAV------AETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 218
+ E + G V E L DK+ +TG++ R + A +
Sbjct: 185 EAAEE------AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238
Query: 219 LTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLL 277
L V LELGGKS +V D +L A ++ NNGQ C++ I+ + +++
Sbjct: 239 LARVTLELGGKSAAIVLDDA-DLDAAVPGLVPASLM-NNGQVCVALTRILVPRSRYDEVV 296
Query: 278 ESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR 335
E+L + +PL+ + + + ++ R+ + + G ++V GG R R
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 336 ---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389
+ PTL DV D I EEIFGP+L ++ D +D+ I N L+ ++T
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTA 413
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 8e-35
Identities = 117/408 (28%), Positives = 175/408 (42%), Gaps = 22/408 (5%)
Query: 15 DAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQ-DLDKPEL 72
DAE VK R F G + G+ S++ L E+ D + AL D KP
Sbjct: 39 DAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYE 98
Query: 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
++ EV L + W T P + EP GVV I PWN+P
Sbjct: 99 QARYAEVPLAA----RLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFP 154
Query: 133 FLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSAL 191
L+ V A+A GN +VLKP+E P S+ L AKL E + + +V G A
Sbjct: 155 LLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAA 214
Query: 192 LDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-VVF-DSGINLKVACRR 246
+ DK+ +TG++ V +I+M AAK +L PV LELGGKSP +V D+ ++ V
Sbjct: 215 IASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAH 274
Query: 247 MIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVN 303
N GQ C + + + +E K +P + V+
Sbjct: 275 F-----ALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVD 329
Query: 304 SNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLP 361
F ++ ++ K G ++ GG+R +K I PT+ DV D I +EIFGP+
Sbjct: 330 KEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQS 389
Query: 362 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL +++ N+ LAA +F+ N + AG + +N
Sbjct: 390 ILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVN 437
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 1e-34
Identities = 90/325 (27%), Positives = 149/325 (45%), Gaps = 21/325 (6%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
++ E + +P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P +
Sbjct: 121 KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLT 180
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAKHL 219
+ LA+L + + + VV G A AL+ K + TG+ + V++AAA +
Sbjct: 181 ALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240
Query: 220 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
LELGGK+PV VFD +L + + N GQ C + I + L+
Sbjct: 241 KRTHLELGGKAPVIVFDDA-DLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVA 298
Query: 279 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGER-DKNKL 334
L + G E +L ++++ H R++ ++ K G ++V GGE D
Sbjct: 299 KLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY 358
Query: 335 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394
PTLL +D I+ E+FGP++ + D + + N LA+ ++T +
Sbjct: 359 YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRA 418
Query: 395 QQFVETVSAGGLVINDTAVHVIMLA 419
+ + G +N H ML
Sbjct: 419 HRVSARLQYGCTWVNT---H-FMLV 439
|
Length = 475 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-34
Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 31/393 (7%)
Query: 34 KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
T R+ L +L E + ++ + L ++ K L+ ++ EV I+ ++EL
Sbjct: 56 PTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT-LKDALKEVDRTIDYIRDTIEEL 114
Query: 94 KHWMTP-------EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAA 146
K K I A++ EP GVVL I P+NYP L++ ++ A+
Sbjct: 115 KRLDGDSLPGDWFPGTKGKI------AQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIM 168
Query: 147 GNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----IRVVEGAVAETSALL--DQKWDKI 199
GN +V KP LL + E + + VV G E L + D I
Sbjct: 169 GNTVVFKP----ATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVI 224
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
+TG++ V + ++LELGGK P + +L++A + ++ G +GQ
Sbjct: 225 SFTGSTEVGNRLKKQHPM--KRLVLELGGKDPAIVLPDADLELAAKEIVKGALS-YSGQR 281
Query: 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 318
C + ++ + A +L+E LK E+ P + D++ +++ + L+DD
Sbjct: 282 CTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAV 341
Query: 319 VSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 377
G +++GG R+ L I PTLL V D + EE FGP+LPI+ V+ IE++ ++ N
Sbjct: 342 AKGATVLNGGGREGGNL-IYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANK 400
Query: 378 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
L A +FT + ++ + + G + IN
Sbjct: 401 SNYGLQASIFTKDINKARKLADALEVGTVNINS 433
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 1e-33
Identities = 90/306 (29%), Positives = 158/306 (51%), Gaps = 18/306 (5%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGEY 172
+ EP GVV I PWN+P + V A+AAG +V+KP+E P S+ + LAKL G
Sbjct: 155 LKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAG-- 212
Query: 173 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 227
+ I VV G A A ++ +D DK+ +TG++ V R +M AAA +L V LELG
Sbjct: 213 VPDGVINVVTGFGPTAGAAIASHMDV--DKVSFTGSTEVGRKIMQAAATSNLKQVSLELG 270
Query: 228 GKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 286
GKSP+ +FD ++ +A ++G + N G+ C++ + + + ++ L + ++
Sbjct: 271 GKSPLLIFDDA-DVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKD 328
Query: 287 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 343
+ +P + + V+ F ++ ++ K G ++ GG+ +K I PT+ D
Sbjct: 329 WVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTD 388
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V D I +EIFGP++ ++ +E++ N+ LAA + T + + ++ A
Sbjct: 389 VTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRA 448
Query: 404 GGLVIN 409
G + +N
Sbjct: 449 GTIWVN 454
|
Length = 501 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 1e-33
Identities = 86/300 (28%), Positives = 153/300 (51%), Gaps = 17/300 (5%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G V I+P+N+P L V AIAAG VLKP+ P S+ +L +++ E + +
Sbjct: 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGA 182
Query: 178 IRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
V+ + + L+ D++ + +TG+ V + A A K V+LELGG + V+ DS
Sbjct: 183 FSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDS 240
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK----NP 292
+L A +R+I G + GQ+CIS ++ + + + K+ L +P
Sbjct: 241 DADLDFAAQRIIFGAFY-QAGQSCISVQRVLVHRS----VYDEFKSRLVARVKALKTGDP 295
Query: 293 LESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLI 350
+ D+ +++ + R+ +++ +G K++ GG+RD L PT+L DVP D +
Sbjct: 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALL--EPTILEDVPPDMEV 353
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
EE+FGP++ + D +++ +N L A +FT + + + + + GG+VIND
Sbjct: 354 NCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND 413
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 130 bits (327), Expect = 4e-33
Identities = 86/383 (22%), Positives = 167/383 (43%), Gaps = 17/383 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L +L R +++ L ++ K +E+ I +VA I+ + P
Sbjct: 79 RARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPA 137
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
E G ++ISPWN+P + +V +A GN ++ KP+E A
Sbjct: 138 VEVVPYP--GEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ ++ E ++ + G E A L ++ I +TG+ + + AAA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 218 HLT------PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
+ +E GGK+ ++ D + ++ +++ +G GQ C + +I T+
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFG-FQGQKCSAASRLILTQG 314
Query: 272 YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330
+LE L E P E+ DL ++++ A++ ++ K G++V GG+R
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRL 374
Query: 331 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLF 387
+ +APT++ +VP + I EEIFGP+L ++ D ++ ++ NS L ++
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434
Query: 388 TNNKKLKQQFVETVSAGGLVIND 410
+ ++ ++ G L IN
Sbjct: 435 SRKREHLEEARREFHVGNLYINR 457
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 5e-33
Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 12/301 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I PWN+P L++ + A+A GN +VLKP+E P ++ LA L+ E
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203
Query: 177 SIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
+ VV G A + DK+ +TG++ V +++ AA K +L V LELGGKSP +
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263
Query: 234 FDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
+ +L A N GQ C + + + ++ + N
Sbjct: 264 VFADADLDYAVE---QAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320
Query: 292 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 348
P + K + ++ F ++ +L++ K G K+ GG+R +K I PT+ DV D
Sbjct: 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDM 380
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
I EEIFGP+ I I++ + N+ T LAA +FT + F + AG + +
Sbjct: 381 RIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWV 440
Query: 409 N 409
N
Sbjct: 441 N 441
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 4e-32
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 34/294 (11%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 177
P GVV +I+ +N+P + A+ GN +V KPSE P ++ + K++ E ++ +
Sbjct: 133 PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGL 192
Query: 178 ----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ +V G + LL D + + +TG++ V R V A+ VLLELGG +
Sbjct: 193 PPGVVNLVTGG-GDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNA 251
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN--------- 282
++ +L +A R ++ G GQ C + +I + + LE L
Sbjct: 252 IIVMDDADLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGD 310
Query: 283 --ELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---I 336
+ G PL ++ + + +N+ A+ G ++ GG+R +
Sbjct: 311 PLDEGTLVG--PLINQAAVEKYLNAIEIAK--------SQGGTVLTGGKRIDGGEPGNYV 360
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PT++ V D+ I+ EE F P+L ++ D +E++ I N + L++ +FT +
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTED 414
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 7e-32
Identities = 86/308 (27%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 117 PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 176
EP GVV I PWN+P L++ + A+AAGN +VLKP+E PAS +L +L+G+ +
Sbjct: 134 HEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPG 193
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
+ VV G E L ++ K+ +TG + R++M A++++ PV LELGGKSP +
Sbjct: 194 VVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIF 253
Query: 234 FDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
F ++ A +M + N G+ C P + + + +E ++
Sbjct: 254 FADVMDADDAFFDKALEGFVM--FALNQGEVCTCPSRALIQESIYDRFMERALERVKAIK 311
Query: 289 GKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPTLL 341
NPL+++ + + ++ +D K G +++ GGER PT
Sbjct: 312 QGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTF 371
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
I EEIFGP+L + T E++ +I N L A ++T + + +
Sbjct: 372 KG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGI 430
Query: 402 SAGGLVIN 409
AG + N
Sbjct: 431 QAGRVWTN 438
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-31
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 11/302 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P GV ++ISPWN+PF + + AI AGN ++LKP+ P ++ +++ E +
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAG 229
Query: 177 SIRVVEGAVAETSA-LLDQKWDK-ICYTGNSRVARIVMAAAAK------HLTPVLLELGG 228
+ V G+ +E L+D + I +TG+ V + AAK L V+ E+GG
Sbjct: 230 VVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGG 289
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
K +V D +L +A ++ +G + GQ C + I +D ++LE + +
Sbjct: 290 KDAIVVDEDADLDLAAESIVASAFGFS-GQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 347
NP ++ + ++N F ++ ++ K G++V GGE D +K I PT+ DV
Sbjct: 349 VGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK 408
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ IM EEIFGP++ + + + +I N+ L + +NN++ ++ G L
Sbjct: 409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLY 468
Query: 408 IN 409
N
Sbjct: 469 FN 470
|
Length = 514 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-31
Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 22/305 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMDL 175
P GVV +ISPWNYP L++ + A+ AGNA+VLKP P ++ +L+ G DL
Sbjct: 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL 213
Query: 176 SSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ G V T AL+D D + +TG++ R++ A + L LELGGK+P++
Sbjct: 214 WQVVTGPGPVVGT-ALVDNA-DYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVL 271
Query: 236 SGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENF-----Y 288
+L A + C N GQ CIS + I + + + + + Y
Sbjct: 272 DDADLDKAAAGAVR---ACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGY 328
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVP 345
+ D+ +++ +S +DD G ++ GG+ D L PT+L V
Sbjct: 329 DYSA----DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVT 384
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
D + EE FGP++ + V ++++ + N L A ++T + + + AG
Sbjct: 385 PDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGT 444
Query: 406 LVIND 410
+ +N+
Sbjct: 445 VNVNE 449
|
Length = 524 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 5e-31
Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Query: 117 PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 176
+P GVV I PWN+P L+ + A+A GN +VLKP+E P ++ L A++ E L
Sbjct: 145 WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAE-AGLP 203
Query: 177 S--IRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-V 232
+ +V G + SAL + DK+ +TG++ V R + A A + LELGGKSP +
Sbjct: 204 PGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFI 263
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
VFD +L A ++ W N GQ C + ++ + A +L+ LK + + +P
Sbjct: 264 VFDDA-DLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP 321
Query: 293 LE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNKLRIAPTLLLDVPRDSL 349
L+ + D+ IV+ R+ +L+++ + G V G + PTL +VP S
Sbjct: 322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASR 381
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EEIFGP+L +LT +++ + N+ LAA +++ N L + ++ AG + IN
Sbjct: 382 IAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWIN 441
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 5e-31
Identities = 85/301 (28%), Positives = 151/301 (50%), Gaps = 12/301 (3%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
+ EP GVVL I+P+N+P + AIAA N +VLKPSE P S+ LA L+ E +
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176
Query: 175 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSP 231
+ VV G E L D + +TG V + + A A K LLELGG P
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQ---LLELGGNDP 233
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
++ +L+ A + G + N+GQ C + I+ + A + ++ L + +
Sbjct: 234 LIVMDDADLERAATLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 292 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSL 349
P+ + D+ +++ ++ +++ G +++ G +R APT+L VP D+
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTVLDHVPPDAE 350
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+++EE FGP+ P++ V ++++ I NS L++ + TN+ ++ VE + G + +N
Sbjct: 351 LVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN 410
Query: 410 D 410
+
Sbjct: 411 E 411
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-30
Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 12/310 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV ++ISPWN+PF + + V I GN +VLKP+E AP ++ +++ E +
Sbjct: 167 PTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGV 226
Query: 178 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGK 229
++ V G+ +E L+D K I +TG+ V + AAK HL V+ E+GGK
Sbjct: 227 VQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGK 286
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-Y 288
V+ D ++++A + +G GQ C + + + +++E E+
Sbjct: 287 DTVIVDEDADIELAAQSAFTSAFGF-AGQKCSAGSRAVVHEKVYDEVVERFVEITESLKV 345
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 347
G + +++ F ++ + ++ K G++V GG D +K I PT+ DV R
Sbjct: 346 GPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIFADVDRK 405
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ + EEIFGP++ + +++ +I N+ L + +NN+ + G L
Sbjct: 406 ARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLY 465
Query: 408 INDTAVHVIM 417
N I+
Sbjct: 466 FNRNITGAIV 475
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 14/303 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P GVV I+P+N+P ++ L AIA GN VLKPSE P ++ LA+L+ E L
Sbjct: 135 QPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQE-AGLPD 193
Query: 178 --IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ VV G +ALLD K + + G++ V + AA + V G K+ V
Sbjct: 194 GVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVV 253
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 294
+L+ ++ +G GQ C++ + D A + + L + +
Sbjct: 254 MPDADLEQTANALVGAAFGAA-GQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDD 312
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 346
D+ +++ R+ L++ G K+V G R +N + PT+L +V
Sbjct: 313 PGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVKVPGYENGNFVGPTILDNVTP 371
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I EEIFGP+L I+ VD ++++ IIN+ A +FT + ++F V AG +
Sbjct: 372 DMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMV 431
Query: 407 VIN 409
IN
Sbjct: 432 GIN 434
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 5e-30
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 20/314 (6%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P+ + E GVV I+PWN+P ++L + A+AAGN +VLKP+ P +++L +L+
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELI 191
Query: 170 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
E+ D + +V + ALL D + D + +TG++ R VMA AA L V LE
Sbjct: 192 AEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLE 251
Query: 226 LGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK-----LLESL 280
LGGKS + +L AC M + GQ C ITT+ P+ + +
Sbjct: 252 LGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRLVVPRARYDEAVAAA 305
Query: 281 KNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLD-DDKVSGKIVHGGERDKNKLR--- 335
+ + +P + + ++++ R+ LD G+ GG R ++ R
Sbjct: 306 AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFF 365
Query: 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395
+ PT++ + ++ + EEIFGP+L ++ D +D+ I N L+ +F + +
Sbjct: 366 VEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAA 425
Query: 396 QFVETVSAGGLVIN 409
V G + +N
Sbjct: 426 AVAARVRTGTVNVN 439
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 9e-30
Identities = 89/304 (29%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
A IV EP GV+ I PWN+P LL+ + A+AAGN+++LKPSE +P S+ LA L E
Sbjct: 151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210
Query: 173 -MDLSSIRVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGG 228
+ + VV G E AL D I +TG++R + ++ A ++ V LE GG
Sbjct: 211 GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGG 270
Query: 229 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
KS +VF +L+ A G + N GQ CI+ ++ + A + L LK + +N+
Sbjct: 271 KSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329
Query: 288 YGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPR 346
+PL+ + + +++ H + + + + G+++ G I PT+ +DV
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDP 389
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
++ + EEIFGP+L + E + + N L A ++T + + + AG +
Sbjct: 390 NASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSV 449
Query: 407 VIND 410
+N+
Sbjct: 450 FVNN 453
|
Length = 494 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 1e-28
Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 28/386 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK----SALKELKHW 96
R L L + L + K E+ +E++ + ++ A E
Sbjct: 44 RARVLLELADAFEANAERLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRM 102
Query: 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
+ PE S+ ++ EP GV II PWN P +L + + A+AAG +V+KP+
Sbjct: 103 IEPEPGSFSL--------VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154
Query: 157 VAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVM 212
++ + +++ E L + + + + +E +A L D I +TG++ R +M
Sbjct: 155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIM 214
Query: 213 AAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
AAAA L + LELGGK+P +VF D+ ++ + + GQ C++ ++ +
Sbjct: 215 AAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRVLVQR 271
Query: 271 DYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 328
A ++ + L L G + D+ +++ + R+ ++++ +G ++V G
Sbjct: 272 SIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGG 331
Query: 329 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 384
L + PTLL D+ I+ EEIFGP+L + T D ++ + N LAA
Sbjct: 332 PVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAA 391
Query: 385 YLFTNNKKLKQQFVETVSAGGLVIND 410
++T + + + AG + IND
Sbjct: 392 SVWTRDLARAMRVARAIRAGTVWIND 417
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 6e-28
Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 16/304 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ + +AAGN +VLKP++V P ++ A+L V
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKG 205
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
I ++ G+ + L D K+ +TG++ + + +M + A +L V LELGGKSP++
Sbjct: 206 VINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+ ++ A RM M N G+ CI+ + + + + + E++ +PL
Sbjct: 266 IFADCDMDKAV-RMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324
Query: 294 E-SKDLSRIVNSNHFARLSKLLDDDKVS----GKIVHGGER-DKNKLRIAPTLLLDVPRD 347
+ S D NH A L KL++ + +V+GG++ D+ PT+ DV
Sbjct: 325 DRSTDHG---PQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDH 381
Query: 348 SLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EE FGP++ I D ++ N LA+ +FT + + + AG
Sbjct: 382 MFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGT 441
Query: 406 LVIN 409
+ +N
Sbjct: 442 VFVN 445
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-28
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 9/280 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 136 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 195
Query: 178 IRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 234
+ ++ G L +K + TG+ +++ A + +ELGGK+PV VF
Sbjct: 196 VNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVF 255
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 293
D V G + N GQ C + I + L+E L + P
Sbjct: 256 DDADIDAVVEGVRTFGFY--NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDD 313
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 350
ES +L + + H R+ K +++ K G K++ GGE+ K APTLL +D I
Sbjct: 314 ESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAI 373
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ +E+FGP++ I + D E + N LA+ ++T +
Sbjct: 374 VQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKD 413
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 9e-28
Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 20/287 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYP ++ A+AAGNA++ KPSEV P ++ LA++ E +
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 233
VV+G A L + D K+ +TG + VMAAAA L V +ELGGKSP +V
Sbjct: 201 VFNVVQGD-GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIV 259
Query: 234 FDSGINLKVACRRMIMGKWGCN---NGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
FD +L A ++ N +GQ C + + K L +E
Sbjct: 260 FDDA-DLDRAADIAMLA----NFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314
Query: 291 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 343
+P+ + + +V+ H ++ ++ K G +++ GGER +APT+ D
Sbjct: 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTD 374
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
D I+ EEIFGP++ +LT D ++ N LAA +FT +
Sbjct: 375 CTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTAD 421
|
Length = 488 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 23/292 (7%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V +P GVV +ISPWN P LL V A+A GN +V+KPSE P +++LL GE M+
Sbjct: 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL----GEVMNA 191
Query: 176 SSI-----RVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ VV G L + D I +TG +R +M AAA + PV ELG
Sbjct: 192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELG 251
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
GK+ + + + A ++ + N GQ C+ + + + + + +LK E+
Sbjct: 252 GKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESL 310
Query: 288 -YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--------GGERDKNKLRIAP 338
G + ++ ++++ H ++ G V G + P
Sbjct: 311 KIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALA-GGAWVQP 369
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T+ +P + +++EEIFGP I D E+ + N LAA ++T +
Sbjct: 370 TIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTED 421
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-26
Identities = 92/309 (29%), Positives = 143/309 (46%), Gaps = 12/309 (3%)
Query: 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169
P + + EP GV I PWN+P L+ V A+A GN +VLK +E P S+ AKL+
Sbjct: 186 PHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLL 245
Query: 170 GEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLE 225
E + + VV G A L DK+ +TG++ +IV+ AAK +L PV LE
Sbjct: 246 HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLE 305
Query: 226 LGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK-N 282
LGGKSP + D+ ++ V + N GQ C + + + +E K
Sbjct: 306 LGGKSPFIVCEDADVDKAVELAHFAL---FFNQGQCCCAGSRTFVHERVYDEFVEKAKAR 362
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTL 340
L+ G + + ++S F ++ + + SG + GG+R +K I PT+
Sbjct: 363 ALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTV 422
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
+V D LI +EIFGP+ IL +++ N+ LAA +FT N
Sbjct: 423 FSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA 482
Query: 401 VSAGGLVIN 409
+ G + +N
Sbjct: 483 LRVGTVWVN 491
|
Length = 538 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
++ +P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L
Sbjct: 142 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGI 201
Query: 175 LSSI-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
+ + VV G+ L K+ +TG++ + R +M AK + V LELGG +P
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
+VFD +L A + K+ N GQ C+ + + + E L+ + +
Sbjct: 262 FIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIG 319
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRD 347
+ LE + +++ A++ + + D G ++V GG+ + PT+L+DVP +
Sbjct: 320 DGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPAN 379
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ + EE FGPL P+ D N LAAY + +
Sbjct: 380 AKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 422
|
Length = 482 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 99/385 (25%), Positives = 180/385 (46%), Gaps = 18/385 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R++ L+ L ++ ER ++ + ++ KP L + EV ++ A EL +
Sbjct: 46 RIAILERLADLMEERADELALLIAREGGKP-LVDAKVEVTRAIDGVELAADELGQ-LGGR 103
Query: 101 KAKTSITTFPSS----AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
+ +T P+S A EP GVV+ IS +N+P L + V AIAAG +++KP+
Sbjct: 104 EIPMGLT--PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161
Query: 157 VAPASSSLLAKLVGEY---MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA 213
P S L+ E E AVAE D + + G++RV ++ +
Sbjct: 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVT-DPRVAFFSFIGSARVGWMLRS 220
Query: 214 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 273
A T LE GG +PV+ D +L ++ G + + GQ C+S + + A
Sbjct: 221 KLAPG-TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIA 278
Query: 274 PKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 331
+ L E +P ++ ++ R+ + +++ +G +++ GG+R
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391
+ APT+LLD PRD+ + ++EIFGP++ + + D ++++ NS A +FT +
Sbjct: 339 DTT-YAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397
Query: 392 KLKQQFVETVSAGGLVIND-TAVHV 415
+ + V + A +++ND TA V
Sbjct: 398 DVALKAVRRLDATAVMVNDHTAFRV 422
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 8/305 (2%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV- 169
S A + +P GVVL + PWN+P + A+ AGN +LK + P ++ LA L
Sbjct: 115 SRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 170 -GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ D ++ G+ A + L D + TG+ R V A A + +LELGG
Sbjct: 175 RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENF 287
P + +L A + + NNGQ+CI+ I D E +
Sbjct: 235 SDPFIVMPSADLDRAAETAVTAR--VQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292
Query: 288 YGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDV 344
+P D+ + + K +DD +G I+ GG+R D PT++ D+
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D + +EE+FGP+ + V I+++ +I N+ T L + +T ++ +++F++ + AG
Sbjct: 353 TPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412
Query: 405 GLVIN 409
+ IN
Sbjct: 413 QVFIN 417
|
Length = 457 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 2e-22
Identities = 94/404 (23%), Positives = 165/404 (40%), Gaps = 31/404 (7%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK--PELESSIY--- 77
V R TF + S R S L +L E +I + + + K + +
Sbjct: 44 VASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGL 103
Query: 78 EVALLKTSIKSALK-ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLS 136
EV + S LK E + SI +P GV I+P+N+P ++
Sbjct: 104 EVVEHACGVNSLLKGETSTQVATRVDVYSIR----------QPLGVCAGITPFNFPAMIP 153
Query: 137 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK 195
L AIA GN VLKPSE P+++ LA+L E + VV G LL+
Sbjct: 154 LWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHP 213
Query: 196 WDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254
K + + G++ + R + + H V G K+ +V + A ++ +G
Sbjct: 214 DVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGA 273
Query: 255 NNGQACISPDHII---TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
GQ C++ + ++ P++ E + ++ G +P ++ ++ R++
Sbjct: 274 A-GQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGDDP--GAEMGPLITPQAKDRVA 329
Query: 312 KLLDDDKVSG-KIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV 365
L+ G +++ G K + PTLL VP EEIFGP+L +L
Sbjct: 330 SLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEA 389
Query: 366 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
D +E++ +IN+ +FT + ++F + G + +N
Sbjct: 390 DTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 4e-22
Identities = 95/407 (23%), Positives = 173/407 (42%), Gaps = 50/407 (12%)
Query: 27 RGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVA 80
R F S R + L+ ++L + ++ + ++ KP E+ + ++
Sbjct: 10 RAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKID 69
Query: 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPV 140
+ SIK A E T E+A A + P GV+ + P+N+P L +
Sbjct: 70 I---SIK-AYHER----TGERATPMAQG---RAVLRHRPHGVMAVFGPFNFPGHLPNGHI 118
Query: 141 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALLDQKW-D 197
V A+ AGN +V KPSE+ PA + L+ +L E L + +V+G AL + D
Sbjct: 119 VPALLAGNTVVFKPSELTPAVAELMVELWEE-AGLPPGVLNLVQGGRETGEALAAHEGID 177
Query: 198 KICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 256
+ +TG++ ++ A +L LE+GG +P+V ++ A ++ +
Sbjct: 178 GLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-LTA 236
Query: 257 GQACISPDHIITTKDYA-----PKLLESLKN-------ELENFYGKNPLESKDLSRIVNS 304
GQ C +I +L+E+ K F G PL + +
Sbjct: 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMG--PL--------IIA 286
Query: 305 NHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 362
AR D G+ + ER ++P ++DV + + EEIFGPLL +
Sbjct: 287 AAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPG-IIDVTDAADVPDEEIFGPLLQV 345
Query: 363 LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
D +++ + N+ L+A L ++++ L ++F+ + AG ++N
Sbjct: 346 YRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAG--IVN 390
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 9e-22
Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 11/293 (3%)
Query: 118 EPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDL 175
EP GV+ I+P+N+P + AIA N +V+KPSE P S+ LA ++ E +
Sbjct: 137 EPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPP 196
Query: 176 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
++VV G E + L + D + +TG + + + AA +LELGG P++
Sbjct: 197 QMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGYRRQVLELGGNDPLI 254
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L A + G + N+GQ C + ++ + A + E L + + +P+
Sbjct: 255 VMEDADLDRAADLAVKGSYK-NSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIM 351
S D+ +++ +++ G +++ G RD APT+L V ++
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALY--APTVLDRVDPSMTLV 371
Query: 352 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
EE FGP+ P++ I+D+ I NS L++ + TN +F+ + G
Sbjct: 372 REETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVG 424
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.2 bits (229), Expect = 3e-20
Identities = 98/405 (24%), Positives = 171/405 (42%), Gaps = 51/405 (12%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F + + +R +L+ + K L R ++ + +++ KP ++ EVA KSA
Sbjct: 42 FRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQARA-EVA------KSA 94
Query: 90 LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAI 144
L W E + P+ E I P G +L I PWN+P + V +
Sbjct: 95 --NLCDWYA-EHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIL 151
Query: 145 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS-----ALLDQKWDKI 199
AGN +LK + + L+A++ + D + V G + + + D + +
Sbjct: 152 LAGNGYLLKHAPNVMGCAQLIAQV---FKDAGIPQGVYGWLNADNDGVSQMINDSRIAAV 208
Query: 200 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 259
TG+ R + A A L +LELGG P + + +L++A + + G++ N GQ
Sbjct: 209 TVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQV 267
Query: 260 CISPDHIITTKDYAPKLLE-------SLK----NELENFYGKNPLESKDLSRIVNSNHFA 308
C + I + A E +LK + EN G P+ DL ++ A
Sbjct: 268 CAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALG--PMARFDLRDELHHQVEA 325
Query: 309 RLSK----LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 364
L++ LL +K++G + APT+L +V + EE+FGP+ I
Sbjct: 326 TLAEGARLLLGGEKIAGAGNY----------YAPTVLANVTPEMTAFREELFGPVAAITV 375
Query: 365 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
E + ++ N L+A +FT ++ +Q + GG+ IN
Sbjct: 376 AKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFIN 420
|
Length = 462 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 2e-18
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG---AIAA--GNALVLKPSEVAPASSSLLAKLVGEYM 173
P GVV +I+ +N+P V G AIA GN +V KPS P ++ + K+V +
Sbjct: 132 PLGVVGVITAFNFPV-----AVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 174 -------DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
++S+ V E D + + +TG++ V R V A A LLEL
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVK-DPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLEL 245
Query: 227 GGK-SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG + +V + +L +A R ++ G GQ C + +I + ++LE LK
Sbjct: 246 GGNNAIIVMEDA-DLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESIYDEVLERLKK--- 300
Query: 286 NFYGK----NPLESKDL-SRIVNSNHFARLSKLLDDDKVS-GKIVHGGER-DKNKLRIAP 338
Y + +PL+ L + +++ K G ++ GG+ D + P
Sbjct: 301 -AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEP 359
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T++ + D+ I+ EE F P+L +L D +E++ N + L++ +FT +
Sbjct: 360 TIV-EGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 85.0 bits (210), Expect = 1e-17
Identities = 83/388 (21%), Positives = 171/388 (44%), Gaps = 35/388 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R ++L L +L P+++ ++ K + ++I EV + A+ +++
Sbjct: 98 RAAKLDRLADLLELHMPELMALCVREAGK-TIHNAIAEV-------REAVDFCRYY---- 145
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
AK E E GV + ISPWN+P + + A+AAGN ++ KP+E
Sbjct: 146 -AKQVRDVLG---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSL 201
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ +L+ E +I+++ G A+ A L D + + +TG++ VA+++ A+
Sbjct: 202 IAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ 261
Query: 218 HL---TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
P++ E GG++ ++ DS + R ++ + + GQ C + + +D A
Sbjct: 262 REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFD-SAGQRCSALRVLCVQEDVAD 320
Query: 275 KLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK 333
++L ++ ++ P L + D+ ++++ L ++ + K + D ++
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380
Query: 334 LR-----IAPTLL-LDVPRDSLIMSEEIFGPLLPIL--TVDKIEDSFDIINSGTKPLAAY 385
+APTL LD D +SEE+FGP+L ++ +++ D IN L
Sbjct: 381 ACQHGTFVAPTLFELD---DIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMG 437
Query: 386 LFTNNKKLKQQFVETVSAGGLVINDTAV 413
+ + + + + G +N V
Sbjct: 438 VHSRIETTYRWIEKHARVGNCYVNRNQV 465
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 3e-17
Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 21/308 (6%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
+ EP GV I P+N+P ++ L A+ GN +LKPSE P +S +LA+L E +
Sbjct: 246 IREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305
Query: 175 LSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ +V G +A+ D+ + + G++ + A AA + +G K+ +
Sbjct: 306 DGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGL 365
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHII---TTKDYAPKLLESLKNELENFYGK 290
N+ ++ +G GQ C++ ++ K + KL+E K L+ G
Sbjct: 366 VLPDANIDATLNALLAAGFGA-AGQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGS 423
Query: 291 NPLESKDLSRIVNSNHFARLSKLLDDDKVSGK---------IVHGGERDKNKLRIAPTLL 341
P DL +++ R+ +L+ G +V G E+ I PT+L
Sbjct: 424 EP--DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGN---FIGPTIL 478
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
V D EEIFGP+L + + +++ IIN A +FT++ ++F +
Sbjct: 479 SGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI 538
Query: 402 SAGGLVIN 409
AG + IN
Sbjct: 539 EAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 5e-17
Identities = 74/305 (24%), Positives = 146/305 (47%), Gaps = 17/305 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
P G V+ ISPWN+P + + A+AAGN+++ KP+E P ++ +L+ E +
Sbjct: 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPG 294
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSP 231
++++ G A L D + + +TG++ VAR++ AK P++ E GG++
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNA 354
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
++ DS + ++ + + GQ C + + +D A ++L LK + N
Sbjct: 355 MIVDSSALAEQVVADVLASAFD-SAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGN 413
Query: 292 P-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL-LDVPR 346
P + D+ ++++ A + K + + G++VH + + +APTL+ L+
Sbjct: 414 PDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD 473
Query: 347 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+ + E+FGP+L ++ D++++ D IN+ L + T + E AG
Sbjct: 474 E---LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAG 530
Query: 405 GLVIN 409
L +N
Sbjct: 531 NLYVN 535
|
Length = 769 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 4e-16
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 12/275 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA---KLVGEYMDL 175
P GVVL I P+NYP L++ + A+ AGNA+VLKP ++ + L G
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAG--FPK 215
Query: 176 SSIRVVEGAVAETSALLDQKWDKIC--YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
I V G +E L C +TG I A + P+ +ELGGK +
Sbjct: 216 GLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAG---MVPLQMELGGKDACI 272
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 293
+L +A +I G + +GQ C + ++ + A L+E + ++ P
Sbjct: 273 VLEDADLDLAAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPE 331
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 353
+ D++ +V+ + + L+ D K G + + L I P LL +V D I E
Sbjct: 332 DDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVRPDMRIAWE 390
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
E FGP+LP++ ++ +E+ N+ L +FT
Sbjct: 391 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 425
|
Length = 496 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-14
Identities = 68/304 (22%), Positives = 141/304 (46%), Gaps = 17/304 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL---VGEYMD 174
GV + ISPWN+P + + A+AAGN ++ KP+E P ++ +L G D
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225
Query: 175 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI---VMAAAAKHLTPVLLELGGK 229
+ +++V G E L + D + +TG++ A++ +A + P++ E GGK
Sbjct: 226 V--LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGK 283
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
+ ++ DS + A + ++ +G + GQ C + + ++ A + +E LK + +
Sbjct: 284 NAMIVDSTALPEQAVKDVVQSAFG-SAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI-APTLLLDVPRD 347
+P + D+ +++ L + + ++ D AP ++ V
Sbjct: 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIF 402
Query: 348 SLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
L + E+FGP+L ++ ++++ + IN+ L + + +++ + + E V AG
Sbjct: 403 DL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGN 460
Query: 406 LVIN 409
L IN
Sbjct: 461 LYIN 464
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 3e-14
Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 23/307 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDLS 176
P+G VL+I +N+P + L + GA+A GN +++KP ++ +L+ +
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159
Query: 177 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ ++ G ALL + +TG+SRVA + A + LEL G + V
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKVLG 217
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLE 294
+ +GQ C + + ++++ L+E LK L + LE
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLA----RRKLE 273
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKV----SGKIVHGGERDKNKLRIAPTLLLDVPRDS-- 348
L + A ++ + + SGK + + L VP D
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF-VPIDEIL 332
Query: 349 ---LIMSEEIFGP--LLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV-ETVS 402
+++EEIFGP ++ D++ +++ L A +++N+ Q+ +
Sbjct: 333 KTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWV 392
Query: 403 AGGLVIN 409
AG
Sbjct: 393 AGRTYAI 399
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 3e-13
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 29/290 (10%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
P G+V +I+ +N+P V+G A+ GN +V K + P + + KLV E +
Sbjct: 154 PLGIVGVITAFNFPC-----AVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVL 208
Query: 174 DLSSI------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ +++ GA + D + + +TG+S+V +V LLEL
Sbjct: 209 EKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELS 268
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
G + ++ ++++A R ++ G GQ C + ++ + +LE L +
Sbjct: 269 GNNAIIVMDDADIQLAVRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQV 327
Query: 288 YGKNPLESKDLSRIVNSNH----FARLSKLLDDDKVSGKIVHGG---ERDKNKLRIAPTL 340
+PLE L +++ F + +++ GKI+ GG E + N + PT+
Sbjct: 328 KIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQ--GGKILTGGSAIESEGN--FVQPTI 383
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ ++ D+ ++ EE+FGP+L ++ +E++ +I NS + L++ +FT N
Sbjct: 384 V-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRN 432
|
Length = 508 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 5e-11
Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 47/322 (14%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAA---------GNALVLKPSEVAPASSSLLAKLVGE 171
G V ISP+N+ AIA GN ++ KPS+ A S+ L+ +++ E
Sbjct: 171 GFVYAISPFNFT----------AIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 172 Y-MDLSSIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVL 223
+ I V +G + + L D I +TG++ + + A++L P +
Sbjct: 221 AGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRI 280
Query: 224 L-ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
+ E GGK V +++ I G + GQ C + + P+ L
Sbjct: 281 VGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQ-GQKCSACSRLYVPHSLWPRFKGRLLA 339
Query: 283 ELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG---KIVHGGERDKNK-LRIA 337
EL G + +++ FA++ K ++ K I+ GG+ D + +
Sbjct: 340 ELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVE 399
Query: 338 PTLLL-DVPRDSLIMSEEIFGPLLPILTV-----DKIEDSFDIINSGTK-PLAAYLFTNN 390
PT++ P++ L M EEIFG P+LTV DK ++ D+++S T L +F +
Sbjct: 400 PTVVESKDPQEPL-MKEEIFG---PVLTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKD 455
Query: 391 KKLKQQFVETV--SAGGLVIND 410
+ + + + +AG IND
Sbjct: 456 RDAILEADKVLRFAAGNFYIND 477
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 4e-10
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP---- 70
+AA V+ R F + S+ R + ++ +L E + ++ + + ++ KP
Sbjct: 38 QVDAA---VRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEA 94
Query: 71 --ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
E+ + I ++A+ SI++ H T EK +A + P GVV + P
Sbjct: 95 ATEVTAMINKIAI---SIQA-----YHERTGEKRSE---MADGAAVLRHRPHGVVAVFGP 143
Query: 129 WNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVA 186
+N+P L +V A+ AGN +V KPSE+ P + L KL + L + + +V+G
Sbjct: 144 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQ-AGLPAGVLNLVQGGRE 202
Query: 187 ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVA 243
AL D + +TG++ ++ A +L LE+GG +P+V D ++ A
Sbjct: 203 TGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAA 261
|
Length = 487 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 6e-09
Identities = 68/311 (21%), Positives = 104/311 (33%), Gaps = 61/311 (19%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
+ P GV + I P P L + + IA N + +P AP ++ LA L
Sbjct: 95 YVRAFPIGVTMHILPSTNP-LSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153
Query: 174 DLSSIRVVEGAVAETSALLDQ------KWDKICYTGNSRVARIVMAAAAKH--LTPVLLE 225
+++ V S L + K D I TG AA KH PV+
Sbjct: 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVD----AAVKHSPHIPVIGF 209
Query: 226 LGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
G SPVV D + + A + K + AC S ++ D L E K +L
Sbjct: 210 GAGNSPVVVDETADEERASGSVHDSK--FFDQNACASEQNLYVVDDVLDPLYEEFKLKLV 267
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP 345
K P E+K LS+ + DD+
Sbjct: 268 VEGLKVPQETKPLSKETTPSF---------DDEAL------------------------- 293
Query: 346 RDSLIMSEEIFGPLLPILTV----DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401
E PL V +E+++ II SG P ++T+ FV+ +
Sbjct: 294 --------ESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYI 345
Query: 402 SAGGLVINDTA 412
N+++
Sbjct: 346 DTASFYPNESS 356
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 6e-09
Identities = 68/278 (24%), Positives = 134/278 (48%), Gaps = 27/278 (9%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P G V+ ISPWN+P + + A+ AGN ++ KP+E P L+A + +
Sbjct: 675 KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTP----LIAARAVRLLHEAG 730
Query: 178 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL---TPVLLELG 227
+ +++ G A L D + + +TG++ VAR++ AK P++ E G
Sbjct: 731 VPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETG 790
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII-TTKDYAPKLLESLKNELEN 286
G++ ++ DS + +I + + GQ C S ++ +D A ++L LK ++
Sbjct: 791 GQNAMIVDSSALPEQVVADVIASAFD-SAGQRC-SALRVLCLQEDVADRVLTMLKGAMDE 848
Query: 287 FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL- 341
+P S D+ ++++ A + ++ + +G++VH + +APTL+
Sbjct: 849 LRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE 908
Query: 342 LDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINS 377
+D D + E+FGP+L ++ D+++ D IN+
Sbjct: 909 IDSISD---LEREVFGPVLHVVRFKADELDRVIDDINA 943
|
Length = 1208 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 27 RGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVA 80
R F + S R++ ++ +L ER+ + + ++ KP E+ S I +VA
Sbjct: 45 RAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVA 104
Query: 81 LLKTSIKSALKELKHWMTPEKAKTSITTFP-SSAEIVPEPFGVVLIISPWNYPFLLSLDP 139
+ SIK+ E+ S P A + P GVV + P+N+P L
Sbjct: 105 I---SIKA---------YHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGH 152
Query: 140 VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WD 197
+V A+ AGN +V KPSE+ P + KL + + + +V+GA AL D
Sbjct: 153 IVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDID 212
Query: 198 KICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFD 235
+ +TG+S ++ A +L LE+GG +P++ D
Sbjct: 213 GLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVD 251
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 21/133 (15%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G V+ ISPWN+P + V A+AAGN+++ KP+E P ++ ++ L
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI------LLEA 821
Query: 179 RVVEGAV------AET-SALL--DQKWDKICYTGNSRVARIVMAAAAKHL------TPVL 223
V G V ET A L D + + +TG++ VAR++ A L P++
Sbjct: 822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLI 881
Query: 224 LELGGKSPVVFDS 236
E GG++ ++ DS
Sbjct: 882 AETGGQNAMIVDS 894
|
Length = 1318 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 4e-07
Identities = 53/280 (18%), Positives = 105/280 (37%), Gaps = 43/280 (15%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
I+ EP GVV I+P P + + ++ N+++ P A + A L+ +
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 175 LSS-----IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ I ++ E + L + + TG V + AA P +
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK----AAYSSGKPAIGVGA 206
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
G +PVV D ++K A + ++ K +NG C S +I +++ + +
Sbjct: 207 GNTPVVIDETADIKRAVQSIVKSK-TFDNGVICASEQSVIVVDSVYDEVMRLFEGQ---- 261
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347
G L +++L ++ +L + V+ IV ++ +IA L VP++
Sbjct: 262 -GAYKLTAEELQQVQPV--------ILKNGDVNRDIV-----GQDAYKIAAAAGLKVPQE 307
Query: 348 SLIM-------------SEEIFGPLLPILTVDKIEDSFDI 374
+ I+ + E P+L + D+
Sbjct: 308 TRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAK 347
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 7e-07
Identities = 58/289 (20%), Positives = 114/289 (39%), Gaps = 12/289 (4%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--SSI 178
GV + I+ +N+P L+ A AG + KP+ + L + + E L S+
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA--AAAKHLTPVLLELGGKSPVVFDS 236
+++ G+ + LD + D + +TG++ A + A + E + +
Sbjct: 206 QLICGSAGDLLDHLDHR-DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264
Query: 237 GINLKV----ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 292
+ I+ + GQ C + +I K +L++L+ L +P
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324
Query: 293 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL-DVPRDSL 349
E D+ +V+ A + + +G ++ GG + PTLLL + P
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGA 384
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
+ + E FGP+ ++ + G L A L T++ + +QF+
Sbjct: 385 VHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI 433
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 69/318 (21%), Positives = 139/318 (43%), Gaps = 40/318 (12%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAA---------GNALVLKPSEVAPASSSLLAKLVGE 171
G V +SP+N+ AI GN ++ KPS+ A S+ L+ K++ E
Sbjct: 172 GFVYAVSPFNFT----------AIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEE 221
Query: 172 Y-MDLSSIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVL 223
+ I V +G V + L + +TG++ + + ++L P +
Sbjct: 222 AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRI 281
Query: 224 L-ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
+ E GGK+ + ++ + G + GQ C + + P++ E L
Sbjct: 282 VGETGGKNFHLVHPSADVDSLVTATVRGAFE-YQGQKCSAASRAYVPESLWPEVKERLLE 340
Query: 283 ELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAP 338
EL+ +P + S + +++ F R+ +D K +I+ GG+ D + + P
Sbjct: 341 ELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEP 400
Query: 339 TLLL-DVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTK-PLAAYLFTNNKKLK 394
T++ P+ +M+EEIFGP+L + E++ +++++ + L +F ++K
Sbjct: 401 TVIETTDPKHK-LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAI 459
Query: 395 QQFVETV--SAGGLVIND 410
++ + + +AG IND
Sbjct: 460 REATDALRNAAGNFYIND 477
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 49.4 bits (119), Expect = 3e-06
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM-----DL 175
GV + ISPWN+P + L V A+AAGN ++ KP+E + L+A + +
Sbjct: 686 GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAE----QTPLIAAEAVKLLHEAGIPK 741
Query: 176 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLL--ELGGKS 230
++++ G A A L D + + +TG++ ARI+ AA+ V L E GG++
Sbjct: 742 DVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQN 801
Query: 231 PVVFDS 236
++ DS
Sbjct: 802 AMIVDS 807
|
Length = 1038 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 60/290 (20%), Positives = 102/290 (35%), Gaps = 52/290 (17%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172
P G V + N+P S V G A+AAG +V+K P +S L+A+ +
Sbjct: 105 PLGPVAVFGASNFPLAFS---VAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161
Query: 173 ----MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLT--PVLL 224
+ +++G E L + +TG+ R R + AAA P
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221
Query: 225 ELGGKSPVVFDSGINLKVACR----------RMIMGKWGCNNGQACISPDHIITTKDYA- 273
ELG +PV G +A R + +G GQ C +P ++ A
Sbjct: 222 ELGSVNPVFILPG---ALAERGEAIAQGFVGSLTLG-----AGQFCTNPGLVLVPAGPAG 273
Query: 274 PKLLESLKNELENFYGKNPLESKD---LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330
+ +L L + L+ + + + L V ++ GG
Sbjct: 274 DAFIAALAEALA--------AAPAQTMLTPGIAEAYRQGVEALAAAPGVR--VLAGGAAA 323
Query: 331 KNKLRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 377
+ + APTL + EE+FGP ++ D + + +
Sbjct: 324 EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEA 373
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.003
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP----SEVAPASSSLLAK--LVGEY 172
P+G V II+P+N+P + ++GA+ GN +LK S V LL +
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD 201
Query: 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA 208
+DL + LL+ +TG+S+VA
Sbjct: 202 VDL----IHSDGPTMNKILLEANPRMTLFTGSSKVA 233
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|130164 TIGR01092, P5CS, delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 68/307 (22%), Positives = 114/307 (37%), Gaps = 63/307 (20%)
Query: 114 EIVPEPFGVVLII---SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
E P GV+LI+ P + SL AI +GN L+LK + A S+++L K++
Sbjct: 392 EKTSVPIGVLLIVFESRPDALVQIASL-----AIRSGNGLLLKGGKEAARSNAILHKVIT 446
Query: 171 EYMDLSSIRVVEGAVA------ETSAL--LDQKWDKICYTGNSRVARIVMAAAAKHLTPV 222
E + I V + + E L LD D + G++++ + + PV
Sbjct: 447 EAI---PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPV 500
Query: 223 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
L G V D ++ +A R + K C+ AC N
Sbjct: 501 LGHADGICHVYVDKSASVDMAKRIVRDAK--CDYPAAC---------------------N 537
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLL 342
+E L KDL R N L L+D + G +HGG R L +
Sbjct: 538 AMETL-----LVHKDLLR----NGL--LDDLIDMLRTEGVTIHGGPRFAAYLTFNIS--- 583
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
++ E + VD + D+ D I+ + T ++ + + F++ V
Sbjct: 584 ----ETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVD 639
Query: 403 AGGLVIN 409
+ + N
Sbjct: 640 SAAVFHN 646
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region [Amino acid biosynthesis, Glutamate family]. Length = 715 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 434 | |||
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.8 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.38 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.3 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.37 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.64 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 93.93 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 93.36 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 93.31 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 92.22 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 91.84 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 91.68 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 91.19 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 89.82 | |
| PLN02926 | 431 | histidinol dehydrogenase | 89.39 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 83.28 |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-89 Score=681.72 Aligned_cols=416 Identities=68% Similarity=1.087 Sum_probs=386.9
Q ss_pred CCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 013901 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE 92 (434)
Q Consensus 13 ~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~ 92 (434)
....+|+++++++|++||+.|+.+|.++|.++|+++++.|++|+++|+++++.|+|||..++...|+..+++.+++++++
T Consensus 6 ~~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~ 85 (484)
T PLN02174 6 MFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQ 85 (484)
T ss_pred hcCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999999999999999998767999999999999999
Q ss_pred HHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh
Q 013901 93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a 172 (434)
++.+.++..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~ 165 (484)
T PLN02174 86 LKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQY 165 (484)
T ss_pred HHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Confidence 99887754432221122345789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhc
Q 013901 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (434)
Q Consensus 173 lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~ 252 (434)
+|+|++|+++|+.+.+..|+++++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.+++++|
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f 245 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW 245 (484)
T ss_pred CCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh
Confidence 99999999998766777888756999999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCC
Q 013901 253 GC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 331 (434)
Q Consensus 253 ~~-~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~ 331 (434)
. |+||.|++++|||||++++|+|+++|+++++++++|+|.+++++||++++.+++++.++|+++.+|+++++||..+.
T Consensus 246 -~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~ 324 (484)
T PLN02174 246 -GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDR 324 (484)
T ss_pred -hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCC
Confidence 6 99999999999999999999999999999999999999878899999999999999999999877889999997655
Q ss_pred CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCC
Q 013901 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411 (434)
Q Consensus 332 ~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 411 (434)
.|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++++++++|.|+||+.
T Consensus 325 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~ 404 (484)
T PLN02174 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDI 404 (484)
T ss_pred CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhhh---hh-hhhhhcCCCCc
Q 013901 412 AVHVI---ML-ALLKNHTLLRS 429 (434)
Q Consensus 412 ~~~~~---~~-~~~~~~~~~~~ 429 (434)
..+.. .| +..+.||+||+
T Consensus 405 ~~~~~~~~~PfGG~k~SG~Gr~ 426 (484)
T PLN02174 405 AVHLALHTLPFGGVGESGMGAY 426 (484)
T ss_pred cCCCCCCCCCCCCcCccccCcc
Confidence 77652 23 67799999997
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=679.70 Aligned_cols=419 Identities=29% Similarity=0.408 Sum_probs=390.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++.+|+++|+++|+.||+.|++++..+|.++|++++++|++++++|+.+++.|+|||+.+++ .|+..++
T Consensus 23 tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~-~ei~~~~ 101 (472)
T COG1012 23 TGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAA 101 (472)
T ss_pred CCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999999999999998 4799999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+.. .+.. .....+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.
T Consensus 102 ~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~ 177 (472)
T COG1012 102 DFIRYYAEEARRLEGET-IPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSAL 177 (472)
T ss_pred HHHHHHHHHHHHhcCCc-cCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHH
Confidence 99999999998766554 2221 1567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++| +.+.++.|+.|+ ++.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl 257 (472)
T COG1012 178 ALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADL 257 (472)
T ss_pred HHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCH
Confidence 999999888 99999999999 556889999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhc-ccCCC-CCCCCcccccCCHHHHHHHHHHHHHhh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKN-PLESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~-p~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.+++++| +|+||.|++++|+|||+++||+|+++|.++ ++ +++|| .++.+++||++++.+++++.++|+++.
T Consensus 258 ~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~ 335 (472)
T COG1012 258 DAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAV 335 (472)
T ss_pred HHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999 66 79999 467999999999999999999999996
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|++++.||.... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|..++.++
T Consensus 336 ~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~ 414 (472)
T COG1012 336 AEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRV 414 (472)
T ss_pred HcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 5678888887433 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh----hhhhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI----MLALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~----~~~~~~~~~~~~~~ 430 (434)
++++++|+|+||++..+.. .-+..|+||+||+.
T Consensus 415 ~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~ 451 (472)
T COG1012 415 ARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREG 451 (472)
T ss_pred HhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccc
Confidence 9999999999999754332 23778999999874
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-89 Score=657.14 Aligned_cols=422 Identities=25% Similarity=0.356 Sum_probs=394.3
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+.++.+++++..++.|++.++++|++||+ .|++++..+|.++|++++++++++++.|+...+.+.|||..+++..++.
T Consensus 44 ~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~ 123 (501)
T KOG2450|consen 44 ATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLP 123 (501)
T ss_pred CCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCch
Confidence 36788999999999999999999999999 6999999999999999999999999999999999999999999878999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.++..++|++.+.+...... .........+++++|+|||+.|.|||||+....|+++|||++||+||+||++.+|+
T Consensus 124 ~~~~~~ry~ag~ad~~~~~~----~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tpl 199 (501)
T KOG2450|consen 124 PAIDCFRYYAGWADKIHGST----IPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPL 199 (501)
T ss_pred hhhhHHHhhccchhhccccc----CCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCc
Confidence 99999999999887652211 11122356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+|+| +.+.+.+|.+|+ |+.|.||||+.+|+.|++.+++ ++||+++|+|||+|.||++
T Consensus 200 sal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~ 279 (501)
T KOG2450|consen 200 TALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFD 279 (501)
T ss_pred hHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEec
Confidence 999999999999 99999999999 778999999997 9999999999999999999885 5899999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhc-ccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
|||++.|++.++++.| +|+||.|++.+|+|||+++|++|+++++++..+ +++|||. +.+.+||.+++.+++|+.+||
T Consensus 280 Dadld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi 358 (501)
T KOG2450|consen 280 DADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYI 358 (501)
T ss_pred ccchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999976 9999995 589999999999999999999
Q ss_pred HHhh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 315 DDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+.++ +|+++++||.. .+.|+|+.|||+.+++++|.+++||+||||+.|++|++.||+|+++|++.|||++.|||+|.+
T Consensus 359 ~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~ 438 (501)
T KOG2450|consen 359 ESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLD 438 (501)
T ss_pred HHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChH
Confidence 9995 78899999976 457999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++.++++++++|+||||++.... ..| +.+|+||+||+
T Consensus 439 ~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE 477 (501)
T KOG2450|consen 439 KAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRE 477 (501)
T ss_pred HHHHHHHHhcCceEEEeccccccccCCccccccccCCcc
Confidence 99999999999999999976443 333 78999999998
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=621.09 Aligned_cols=423 Identities=24% Similarity=0.350 Sum_probs=396.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.|++++.++..+.++|++.|++||++|++++..+|.++|++|.++|.+|+++|+.+++.|.|||+.|++ +||..+.
T Consensus 48 ~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a 126 (503)
T KOG2451|consen 48 NGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAK-GEVAYSA 126 (503)
T ss_pred ccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhH
Confidence 678999999999999999999999999999999999999999999999999999999999999999999998 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++|++.++++.+++...+. .......+.++|+||+++|+|||||.+-...+..+||++||+||+||+..+|+++.
T Consensus 127 ~f~eWyAeEA~RvyGdii~s~---~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaL 203 (503)
T KOG2451|consen 127 AFFEWYAEEARRVYGDIIPSL---NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSAL 203 (503)
T ss_pred HHHHHHHHHhhhhhccccCCC---CCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHH
Confidence 999999999999888664221 23456778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC----hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA----VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~----~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.++++..++ +|+|++|+|+++ .+.+++|+.+| |..|.||||+.+|+.++.+.+.+.|++.+|+|||.|+||++|
T Consensus 204 ala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFdd 283 (503)
T KOG2451|consen 204 ALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDD 283 (503)
T ss_pred HHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEecC
Confidence 999999999 999999999952 36789999988 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||+|+|++..+..+| -++||.|.+.+|+|||+++||+|+..|.++++++++||-. +.++.|||+++.+.++++.+++|
T Consensus 284 adld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~D 362 (503)
T KOG2451|consen 284 ADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVED 362 (503)
T ss_pred cCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 58899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 317 DK-VSGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
|. +|+++++||+. .+ +.+|++|||+.+++.+|-+..||.|||+.+|.+|+|.+|+|+++|+++.||+.|+||+|..+
T Consensus 363 AvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~ 442 (503)
T KOG2451|consen 363 AVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSR 442 (503)
T ss_pred HHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHH
Confidence 95 67899999984 33 45999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh--hhhhhhhhcCCCCccc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV--IMLALLKNHTLLRSCI 431 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~--~~~~~~~~~~~~~~~~ 431 (434)
..+++++|++|+|.+|.-...- ..-+.+|+||+|||+.
T Consensus 443 ~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgs 482 (503)
T KOG2451|consen 443 LFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGS 482 (503)
T ss_pred HHHHHHHHhcceeecccceecccccCcCCccccccCcccc
Confidence 9999999999999999744333 3338899999999964
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-88 Score=681.13 Aligned_cols=422 Identities=22% Similarity=0.340 Sum_probs=390.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+.++++|+|||..+++ .|+..++
T Consensus 35 tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 113 (482)
T PRK11241 35 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 113 (482)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+...+... ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 190 (482)
T PRK11241 114 SFIEWFAEEGKRIYGDTI-PGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190 (482)
T ss_pred HHHHHHHHHHHHhcCccc-ccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHH
Confidence 999999988776533221 110 11234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 191 ~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADl 270 (482)
T PRK11241 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 270 (482)
T ss_pred HHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCH
Confidence 999999998 99999999998 456788999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
|.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 271 d~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 349 (482)
T PRK11241 271 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALE 349 (482)
T ss_pred HHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999995 5789999999999999999999995
Q ss_pred hCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++
T Consensus 350 ~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~ 429 (482)
T PRK11241 350 KGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 429 (482)
T ss_pred CCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHH
Confidence 6789999997643 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|.||||+..... ..| +..|.||+||+.
T Consensus 430 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 464 (482)
T PRK11241 430 GEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 464 (482)
T ss_pred HHHcCccEEEECCCCCCCCCCCcCCccccccCccc
Confidence 999999999999865433 223 677999999873
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-87 Score=682.74 Aligned_cols=418 Identities=19% Similarity=0.252 Sum_probs=387.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+.++++|+|||+.+++ .|+..++
T Consensus 138 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i 216 (604)
T PLN02419 138 TQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGL 216 (604)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.+... +. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 217 ~~~~~~a~~a~~~~g~~~-~~--~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~ 293 (604)
T PLN02419 217 EVVEHACGMATLQMGEYL-PN--VSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293 (604)
T ss_pred HHHHHHHHHHHHhhCCcc-cc--cCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence 999999998887655321 11 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|+||+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 294 ~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld 373 (604)
T PLN02419 294 ILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANID 373 (604)
T ss_pred HHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHH
Confidence 999999998 99999999999767888899886 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|++++|||||++ +++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 374 ~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~ 451 (604)
T PLN02419 374 ATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD 451 (604)
T ss_pred HHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999 999999999999999999 899999999999999999995 5889999999999999999999995 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus 452 GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a 531 (604)
T PLN02419 452 GAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAA 531 (604)
T ss_pred CCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 78999999742 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCC
Q 013901 395 QQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLL 427 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~ 427 (434)
+++++++++|.|+||+..... ..| +..+.||+|
T Consensus 532 ~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G 567 (604)
T PLN02419 532 RKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAG 567 (604)
T ss_pred HHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCC
Confidence 999999999999999863222 122 667999999
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-86 Score=666.09 Aligned_cols=423 Identities=23% Similarity=0.318 Sum_probs=388.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..|++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~ 104 (472)
T TIGR03374 25 TGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIV 104 (472)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999988656999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...+. ..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~ 181 (472)
T TIGR03374 105 DVFRFFAGAARCLSGL-AAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 181 (472)
T ss_pred HHHHHHHHHHHHhcCc-ccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHH
Confidence 9999998876654321 11110 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+|
T Consensus 182 ~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~ 261 (472)
T TIGR03374 182 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADID 261 (472)
T ss_pred HHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCCCCHH
Confidence 99999998999999999998 567789999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. .
T Consensus 262 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 340 (472)
T TIGR03374 262 AVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL 340 (472)
T ss_pred HHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999996 4
Q ss_pred C-CeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~-~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
| +++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|++||++++|++++||++||||+|.++++++
T Consensus 341 G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~ 420 (472)
T TIGR03374 341 GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL 420 (472)
T ss_pred CCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 5 5999999764 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++|.|+||+...+.. .| +..+.||+||++
T Consensus 421 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 455 (472)
T TIGR03374 421 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 455 (472)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCccCccCccc
Confidence 9999999999998664431 22 556888888873
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-85 Score=659.65 Aligned_cols=420 Identities=20% Similarity=0.315 Sum_probs=388.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T PRK13968 16 TGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSA 94 (462)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+..... ..+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~ 170 (462)
T PRK13968 95 NLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQ 170 (462)
T ss_pred HHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999999888775533211 12356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~ 250 (462)
T PRK13968 171 LIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_pred HHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHH
Confidence 999999999 99999999998545556688886 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++. +
T Consensus 251 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 329 (462)
T PRK13968 251 LAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAE 329 (462)
T ss_pred HHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999964 789999999999999999999984 6
Q ss_pred CCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||.... .|+|++|||+.+++++|.+++||+||||++|++|+|++||++++|++++||+++|||+|.+.+++++
T Consensus 330 Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~ 409 (462)
T PRK13968 330 GARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMA 409 (462)
T ss_pred CCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence 789999997543 4899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-h-hhhhhhhcCCCCc
Q 013901 399 ETVSAGGLVINDTAVHV-I-MLALLKNHTLLRS 429 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~-~~~~~~~~~~~~~ 429 (434)
+++++|+|+||+..... . .-+..+.||+||+
T Consensus 410 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 442 (462)
T PRK13968 410 ARLECGGVFINGYCASDARVAFGGVKKSGFGRE 442 (462)
T ss_pred HhCCcceEEECCCCCCCCCCCCCCccccccCcC
Confidence 99999999999865432 1 2256688888887
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-85 Score=657.95 Aligned_cols=424 Identities=21% Similarity=0.337 Sum_probs=391.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 10 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 88 (457)
T PRK09406 10 TGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCA 88 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++......... ...+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 167 (457)
T PRK09406 89 KGFRYYAEHAEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTAL 167 (457)
T ss_pred HHHHHHHHHHHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHH
Confidence 9999999998887654322111 012345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||++
T Consensus 168 ~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~dadl~ 247 (457)
T PRK09406 168 YLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLD 247 (457)
T ss_pred HHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCCCHH
Confidence 999999998 99999999986555678888886 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++. +
T Consensus 248 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 326 (457)
T PRK09406 248 RAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAA 326 (457)
T ss_pred HHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999964 789999999999999999999985 6
Q ss_pred CCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++|+|++||++++|++++||+++|||+|.+++++++
T Consensus 327 Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 406 (457)
T PRK09406 327 GATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFI 406 (457)
T ss_pred CCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 78999999763 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||+.++.. ..| +..+.||+||++
T Consensus 407 ~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 440 (457)
T PRK09406 407 DDLEAGQVFINGMTVSYPELPFGGVKRSGYGREL 440 (457)
T ss_pred HhCCcceEEECCCCCCCCCCCCCCccccccCccc
Confidence 99999999999866544 222 667888999874
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-85 Score=662.90 Aligned_cols=421 Identities=23% Similarity=0.328 Sum_probs=387.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++.+++.|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~ 124 (501)
T PLN02766 45 TGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPA 124 (501)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 6788999999999999999999999997 59999999999999999999999999999999999999999987569999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++...+++.+.. ... ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 125 ~~~~l~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~ 200 (501)
T PLN02766 125 AAGLLRYYAGAADKIHGET-LKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLS 200 (501)
T ss_pred HHHHHHHHHHHHHHhcCce-ecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHH
Confidence 9999999999887764421 111 112456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|
T Consensus 201 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~d 280 (501)
T PLN02766 201 ALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDD 280 (501)
T ss_pred HHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCC
Confidence 99999999998 99999999999 557788899987 999999999999999999998 589999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++|++
T Consensus 281 ADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~ 359 (501)
T PLN02766 281 ADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEH 359 (501)
T ss_pred CCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999964 7899999999999999999999
Q ss_pred hh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus 360 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a 439 (501)
T PLN02766 360 GKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVA 439 (501)
T ss_pred HHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 85 677999999763 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+..... ..| +..|.||+||+
T Consensus 440 ~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 476 (501)
T PLN02766 440 NTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRD 476 (501)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCcc
Confidence 999999999999999854322 123 55788999987
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-84 Score=657.99 Aligned_cols=421 Identities=26% Similarity=0.369 Sum_probs=388.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|++++++.|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++..|+..++
T Consensus 25 t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i 104 (475)
T cd07117 25 NGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAA 104 (475)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999766999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++..++....... . . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~l~~~a~~~~~~~~~~~-~--~-~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~ 180 (475)
T cd07117 105 DHFRYFAGVIRAEEGSAN-M--I-DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180 (475)
T ss_pred HHHHHHHHHHHHhcCccc-c--c-CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence 999999887765432211 1 1 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 181 ~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~ 260 (475)
T cd07117 181 ELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWD 260 (475)
T ss_pred HHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCCCChH
Confidence 99999999999999999998 456788899997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +
T Consensus 261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 339 (475)
T cd07117 261 KALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEE 339 (475)
T ss_pred HHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5789999999999999999999985 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+++
T Consensus 340 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 419 (475)
T cd07117 340 GAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRA 419 (475)
T ss_pred CCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHH
Confidence 78999999753 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
.++++++++|+|+||++.... ..| +..+.||+||+
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 456 (475)
T cd07117 420 LRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRE 456 (475)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCC
Confidence 999999999999999855433 223 56788999987
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=656.48 Aligned_cols=414 Identities=43% Similarity=0.733 Sum_probs=385.5
Q ss_pred CCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 013901 13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE 92 (434)
Q Consensus 13 ~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~ 92 (434)
..+.++++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999878999999999999999
Q ss_pred HHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh
Q 013901 93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (434)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a 172 (434)
++.|+++..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 99998765433221123456789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhc
Q 013901 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (434)
Q Consensus 173 lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~ 252 (434)
+|+|++++++|+.+.+..|+++++|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|
T Consensus 163 lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~ 242 (493)
T PTZ00381 163 LDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF 242 (493)
T ss_pred CCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence 99999999998778888899888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCC
Q 013901 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 332 (434)
Q Consensus 253 ~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~ 332 (434)
.|+||.|++++++|||++++++|+++|++++++++.+++++++++||++++++.+++.++++ ..++++++||..+..
T Consensus 243 -~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~--~~ga~~~~gG~~~~~ 319 (493)
T PTZ00381 243 -LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK--DHGGKVVYGGEVDIE 319 (493)
T ss_pred -hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHH--hCCCcEEECCCcCCC
Confidence 99999999999999999999999999999999998666677899999999999999999997 358899999987667
Q ss_pred CcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCc
Q 013901 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (434)
Q Consensus 333 ~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 412 (434)
++|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|.|+||+..
T Consensus 320 ~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~ 399 (493)
T PTZ00381 320 NKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCV 399 (493)
T ss_pred CCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhhhh----hhhhhcCCCCc
Q 013901 413 VHVIML----ALLKNHTLLRS 429 (434)
Q Consensus 413 ~~~~~~----~~~~~~~~~~~ 429 (434)
.|...+ +..+.||+||+
T Consensus 400 ~~~~~~~~PFGG~g~SG~G~~ 420 (493)
T PTZ00381 400 FHLLNPNLPFGGVGNSGMGAY 420 (493)
T ss_pred ccccCCCCCCCCcCccccccc
Confidence 776433 56688888887
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=656.65 Aligned_cols=426 Identities=21% Similarity=0.299 Sum_probs=388.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++++++.|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus 30 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~ 109 (486)
T cd07140 30 DGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGM 109 (486)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 6788999999999999999999999998 59999999999999999999999999999999999999999986579999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++.+.+...+...............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 110 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~ 189 (486)
T cd07140 110 SIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT 189 (486)
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHH
Confidence 99999999988776543221100000011235789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.+.+.++. ++||+++|+|||||+||++|
T Consensus 190 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~d 269 (486)
T cd07140 190 ALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFAD 269 (486)
T ss_pred HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCC
Confidence 99999999998 99999999998 456788899997 9999999999999999999996 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++++++++.++|++
T Consensus 270 adl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~ 348 (486)
T cd07140 270 CDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCER 348 (486)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999965 8899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+. +|+++++||.. +..|+|++|||+.+++++|.+++||+||||++|++|+ |++|||+++|+++|||++||||+|.+
T Consensus 349 a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~ 428 (486)
T cd07140 349 GVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDIN 428 (486)
T ss_pred HHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 95 68899999975 4468999999999999999999999999999999998 69999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|.|+||+..... ..| +..|.||+|+++
T Consensus 429 ~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 468 (486)
T cd07140 429 KALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDL 468 (486)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcc
Confidence 99999999999999999855433 223 567899999873
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-84 Score=651.13 Aligned_cols=416 Identities=51% Similarity=0.829 Sum_probs=384.6
Q ss_pred CCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHH
Q 013901 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93 (434)
Q Consensus 14 ~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~ 93 (434)
+..+|++++++.|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.++++++.+
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999996579999999999999999
Q ss_pred HhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhc
Q 013901 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173 (434)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~al 173 (434)
+.+.+...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~l 162 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYL 162 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhC
Confidence 88876532111111124467899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC---CCCHHHHHHHHHHH
Q 013901 174 DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS---GINLKVACRRMIMG 250 (434)
Q Consensus 174 p~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~---dad~~~aa~~i~~~ 250 (434)
|+|++|+++|+.+.+..|+.|++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++ |||++.|++.++++
T Consensus 163 P~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~ 242 (484)
T PLN02203 163 DSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGG 242 (484)
T ss_pred CcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHH
Confidence 999999999877888899988999999999999999999999999999999999999999997 69999999999999
Q ss_pred hccc-CCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCcc
Q 013901 251 KWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (434)
Q Consensus 251 ~~~~-~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~ 329 (434)
+| . |+||.|++++++|||++++++|+++|++++.++++|+|.+++++||++++++++++.++|+++..++++++||..
T Consensus 243 ~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~ 321 (484)
T PLN02203 243 KW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSI 321 (484)
T ss_pred hc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCc
Confidence 99 7 799999999999999999999999999999999999998778999999999999999999999766899999976
Q ss_pred CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEC
Q 013901 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (434)
Q Consensus 330 ~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN 409 (434)
+.+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||++||||+|.++++++++++++|.|+||
T Consensus 322 ~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN 401 (484)
T PLN02203 322 DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFN 401 (484)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEC
Confidence 55699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhh---hh-hhhhhcCCCCcc
Q 013901 410 DTAVHVI---ML-ALLKNHTLLRSC 430 (434)
Q Consensus 410 ~~~~~~~---~~-~~~~~~~~~~~~ 430 (434)
+...+.. .| +..+.||+||+.
T Consensus 402 ~~~~~~~~~~~PfGG~k~SG~Gr~~ 426 (484)
T PLN02203 402 DAIIQYACDSLPFGGVGESGFGRYH 426 (484)
T ss_pred CcccccCCCCCCCCCcCcccCCccc
Confidence 9765532 22 667899999874
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-84 Score=657.24 Aligned_cols=426 Identities=24% Similarity=0.329 Sum_probs=388.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~-w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+.+++++++++|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+
T Consensus 24 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~ 103 (477)
T cd07113 24 TEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQS 103 (477)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 67889999999999999999999999985 99999999999999999999999999999999999999999875599999
Q ss_pred HHHHHHHHHHHHhhcccccccc-c-cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 83 KTSIKSALKELKHWMTPEKAKT-S-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
++.+++++++.+.......... . ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 104 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~ 183 (477)
T cd07113 104 ANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL 183 (477)
T ss_pred HHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 9999999887766433221110 0 0011235678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
++..+.+++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++||
T Consensus 184 ~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dA 263 (477)
T cd07113 184 TLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDA 263 (477)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECCCC
Confidence 999999999998 99999999998555788899998 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 264 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 342 (477)
T cd07113 264 DIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDA 342 (477)
T ss_pred CHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 478999999999999999999998
Q ss_pred h-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. +|+++++||... ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 343 ~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~ 422 (477)
T cd07113 343 RAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKAL 422 (477)
T ss_pred HHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 5 688999999753 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||...... ..| +..+.||+||+.
T Consensus 423 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 459 (477)
T cd07113 423 RYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREF 459 (477)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccc
Confidence 99999999999999765433 223 677899999874
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=657.91 Aligned_cols=421 Identities=25% Similarity=0.356 Sum_probs=388.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 49 tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i 127 (498)
T PLN02278 49 TGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGA 127 (498)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 677899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+.. .+. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 128 ~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~ 204 (498)
T PLN02278 128 SFLEYFAEEAKRVYGDI-IPS--PFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTAL 204 (498)
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999888765422 111 112335677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++|+ .+.++.|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 205 ~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl 284 (498)
T PLN02278 205 AAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADL 284 (498)
T ss_pred HHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCH
Confidence 999999998 999999999984 46778899987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 285 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (498)
T PLN02278 285 DVAVKGALASKF-RNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVS 363 (498)
T ss_pred HHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999995 5789999999999999999999985
Q ss_pred hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||... .+|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 364 ~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~ 443 (498)
T PLN02278 364 KGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRV 443 (498)
T ss_pred CCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 678999999764 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++|.|+||+...+.. .| +..+.||+||+
T Consensus 444 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 477 (498)
T PLN02278 444 SEALEYGIVGVNEGLISTEVAPFGGVKQSGLGRE 477 (498)
T ss_pred HHhCCcCeEEECCCCCCCCCCCcCCcccCcCCcc
Confidence 9999999999998665442 12 56688888887
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=652.93 Aligned_cols=423 Identities=24% Similarity=0.355 Sum_probs=389.4
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+..+++.++++|++|++.|+.+|.++|.++|+++++.|++++++|+.++++|+|||..+++ .|+..+
T Consensus 5 ~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~ 83 (448)
T TIGR01780 5 ATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GEILYA 83 (448)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 3688999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+..++++....+++.+... .. ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 84 ~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 84 ASFLEWFAEEAKRVYGDTI-PS--PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHhcCccc-cC--CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 9999998887776543221 11 11234556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC--hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~--~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
..+++++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++.++||+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 9999999998 999999999985 56778899986 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 241 dl~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 319 (448)
T TIGR01780 241 DIDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADA 319 (448)
T ss_pred CHHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999998
Q ss_pred h-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. +|+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|++||++++|+++|||++||||+|.++++
T Consensus 320 ~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~ 399 (448)
T TIGR01780 320 VEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIW 399 (448)
T ss_pred HHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHH
Confidence 5 678999999764 35889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++|.|+||+...+. ..| +..+.||+||+.
T Consensus 400 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~ 436 (448)
T TIGR01780 400 RVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREG 436 (448)
T ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccc
Confidence 99999999999999865443 122 566888999873
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-84 Score=654.33 Aligned_cols=422 Identities=25% Similarity=0.342 Sum_probs=389.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 25 t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 104 (480)
T cd07559 25 NGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAI 104 (480)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999767999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...+... . . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~~~~-~--~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~ 180 (480)
T cd07559 105 DHFRYFAGVIRAQEGSLS-E--I-DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSIL 180 (480)
T ss_pred HHHHHHHHHHHHhcCccc-c--C-CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHH
Confidence 999999888765433211 1 1 12345788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC---
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI--- 238 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da--- 238 (434)
.+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++||
T Consensus 181 ~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~ 260 (480)
T cd07559 181 VLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDA 260 (480)
T ss_pred HHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCCcccc
Confidence 99999999999999999998 467788999987 9999999999999999999999999999999999999999999
Q ss_pred --CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 239 --NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 239 --d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 261 ~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~ 339 (480)
T cd07559 261 DDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVD 339 (480)
T ss_pred ccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 4789999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecC
Q 013901 316 DDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~ 389 (434)
++. +|+++++||... ..|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+
T Consensus 340 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~ 419 (480)
T cd07559 340 IGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTR 419 (480)
T ss_pred HHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECC
Confidence 985 678999999764 35899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 390 NKKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 390 d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
|.+++.++++++++|+|+||++.... ..| +..|.||+||++
T Consensus 420 d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 462 (480)
T cd07559 420 DINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRET 462 (480)
T ss_pred CHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccC
Confidence 99999999999999999999754333 223 567999999873
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-84 Score=654.41 Aligned_cols=421 Identities=18% Similarity=0.204 Sum_probs=384.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 43 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i 121 (508)
T PLN02315 43 NNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEII 121 (508)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.+... +.. ..+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.
T Consensus 122 ~~~~~~~~~~~~l~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 198 (508)
T PLN02315 122 DMCDFAVGLSRQLNGSII-PSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (508)
T ss_pred HHHHHHHHHHHHhcCccc-cCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHH
Confidence 999999988776543221 111 11234467899999999999999999999999999999999999999999999888
Q ss_pred H----HHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 L----LAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~----l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
. +.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|
T Consensus 199 ~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~d 278 (508)
T PLN02315 199 AMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDD 278 (508)
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCC
Confidence 7 56777887 99999999998667788899887 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+.+++.+++++
T Consensus 279 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 357 (508)
T PLN02315 279 ADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEI 357 (508)
T ss_pred CCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999964 7899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||.. +.+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+
T Consensus 358 a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a 436 (508)
T PLN02315 358 IKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETI 436 (508)
T ss_pred HHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 95 68899999975 346899999999 5999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--hcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 395 QQFVE--TVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~--~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+++++ ++++|.|+||+++.+. ..| +..+.||+||+.
T Consensus 437 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~ 477 (508)
T PLN02315 437 FKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREA 477 (508)
T ss_pred HHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccc
Confidence 99985 7999999999865433 223 667899999873
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-84 Score=654.38 Aligned_cols=425 Identities=22% Similarity=0.306 Sum_probs=388.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~-w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..++++++++|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+
T Consensus 23 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~ 102 (481)
T TIGR03216 23 DGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRG 102 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHH
Confidence 67889999999999999999999999997 99999999999999999999999999999999999999998865699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++..+...............+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~ 182 (481)
T TIGR03216 103 AANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTA 182 (481)
T ss_pred HHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 99999999888754322111000001123567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-Ch-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
.++.+++.++ +|+|++|+++| +. +.+..|..|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++||
T Consensus 183 ~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~da 262 (481)
T TIGR03216 183 TLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADC 262 (481)
T ss_pred HHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCC
Confidence 9999999998 99999999998 44 3677788886 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|+|.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++
T Consensus 263 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 341 (481)
T TIGR03216 263 DFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALA 341 (481)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999965 88999999999999999999999
Q ss_pred h-hCCeeeecCccC------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 318 K-VSGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 318 ~-~~~~v~~gg~~~------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
. +|+++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|
T Consensus 342 ~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d 421 (481)
T TIGR03216 342 VEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTED 421 (481)
T ss_pred HHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCC
Confidence 5 678999999753 358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
.+.++++++++++|.|+||+...+. ..| +..|.||+||+
T Consensus 422 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 462 (481)
T TIGR03216 422 LSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGRE 462 (481)
T ss_pred HHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcC
Confidence 9999999999999999999877654 223 56789999987
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-84 Score=650.51 Aligned_cols=421 Identities=23% Similarity=0.312 Sum_probs=388.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|++++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 84 (456)
T cd07107 6 TGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVAA 84 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999986 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+ ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 160 (456)
T cd07107 85 ALLDYFAGLVTELKG-ETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSAL 160 (456)
T ss_pred HHHHHHHHHHHHhCC-ccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHH
Confidence 999999876654433 222111 2345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++++ .+.++.|+.|+ +|.|.||||+++|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 161 ~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl~ 240 (456)
T cd07107 161 RLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPE 240 (456)
T ss_pred HHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHH
Confidence 999999999999999999984 45788999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-cccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 242 VACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 242 ~aa~~i~~~~-~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
.|++.+++++ | .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 241 ~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 319 (456)
T cd07107 241 AAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKR 319 (456)
T ss_pred HHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHH
Confidence 9999999995 8 8999999999999999999999999999999999999996 4789999999999999999999985
Q ss_pred hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++
T Consensus 320 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 399 (456)
T cd07107 320 EGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQ 399 (456)
T ss_pred CCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHH
Confidence 678999999652 258899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++++|.|+||++..+. ..| +..|.||+|+++
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~ 438 (456)
T cd07107 400 AHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREE 438 (456)
T ss_pred HHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCc
Confidence 9999999999999999977654 223 567999999874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=653.01 Aligned_cols=424 Identities=28% Similarity=0.409 Sum_probs=389.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhh-----hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTF-----ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~-----~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e 78 (434)
+++.+++++..+.+|++++++.|++|| +.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|
T Consensus 32 t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 110 (503)
T PLN02467 32 TEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WD 110 (503)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 678899999999999999999999999 899999999999999999999999999999999999999999997 59
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCC
Q 013901 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (434)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~ 158 (434)
+..++..+++++...+.+.+...............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~t 190 (503)
T PLN02467 111 MDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELA 190 (503)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999998887654321111111112357889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 159 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 159 ~~~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
|.++..+++++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||+
T Consensus 191 p~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~ 270 (503)
T PLN02467 191 SVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVF 270 (503)
T ss_pred cHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEEC
Confidence 99999999999998 99999999998 567788999987 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.+++
T Consensus 271 ~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v 349 (503)
T PLN02467 271 DDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFI 349 (503)
T ss_pred CCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999965 78999999999999999999
Q ss_pred HHhh-hCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 315 DDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
+++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||+++|||+|
T Consensus 350 ~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d 429 (503)
T PLN02467 350 STAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISND 429 (503)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9985 678999999753 258899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
.+.++++++++++|.|+||+..... ..| +..+.||+||+
T Consensus 430 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 470 (503)
T PLN02467 430 LERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRE 470 (503)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCc
Confidence 9999999999999999999865322 222 56788899887
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-84 Score=652.66 Aligned_cols=421 Identities=26% Similarity=0.366 Sum_probs=389.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 24 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 102 (473)
T cd07097 24 TSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEAR-GEVTRAG 102 (473)
T ss_pred CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 378899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+..... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~ 179 (473)
T cd07097 103 QIFRYYAGEALRLSGETLPS---TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAW 179 (473)
T ss_pred HHHHHHHHHHHHhcCccccc---CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence 99999998887765432111 112345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+++.+.+.+++++||+++|+|||||+||++|||+
T Consensus 180 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl 259 (473)
T cd07097 180 ALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADL 259 (473)
T ss_pred HHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCH
Confidence 999999998 999999999984 56788899987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +.+++||++++.+++++.++++++.
T Consensus 260 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 338 (473)
T cd07097 260 DLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARS 338 (473)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5789999999999999999999995
Q ss_pred hCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 ~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|++||++++|+++|||+++|||+|.++++
T Consensus 339 ~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~ 418 (473)
T cd07097 339 EGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHAT 418 (473)
T ss_pred CCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 688999999753 24789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh--hh-hhhhhcCCC-Cc
Q 013901 396 QFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLL-RS 429 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~-~~ 429 (434)
++++++++|+|+||+++.+.. .| +..+.||+| |+
T Consensus 419 ~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~ 456 (473)
T cd07097 419 HFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPRE 456 (473)
T ss_pred HHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccC
Confidence 999999999999998765432 23 667888888 76
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=655.82 Aligned_cols=421 Identities=25% Similarity=0.333 Sum_probs=386.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 82 tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~ 161 (538)
T PLN02466 82 TGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPM 161 (538)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6788999999999999999999999997 49999999999999999999999999999999999999999987679999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++.+.++..+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 162 ~~~~l~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~ 237 (538)
T PLN02466 162 FARLFRYYAGWADKIHGLT-VPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 237 (538)
T ss_pred HHHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHH
Confidence 9999999988776653321 111 112346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.+++ ++||+++|+|||||+||++|
T Consensus 238 ~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~d 317 (538)
T PLN02466 238 ALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCED 317 (538)
T ss_pred HHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCC
Confidence 99999999999 99999999998 456778899886 9999999999999999999984 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.+++++
T Consensus 318 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~ 396 (538)
T PLN02466 318 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKS 396 (538)
T ss_pred CCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 57899999999999999999999
Q ss_pred hh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 397 a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a 476 (538)
T PLN02466 397 GVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTA 476 (538)
T ss_pred HHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 85 678999999763 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+..... ..| +..|.||+||+
T Consensus 477 ~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~ 513 (538)
T PLN02466 477 NTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGRE 513 (538)
T ss_pred HHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcc
Confidence 999999999999999855433 223 56789999987
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=654.26 Aligned_cols=422 Identities=25% Similarity=0.319 Sum_probs=388.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 31 tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 110 (488)
T PRK13252 31 TGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGA 110 (488)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999767999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...+.. .. . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~l~~~~~~~~~~~g~~-~~--~-~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~ 186 (488)
T PRK13252 111 DVLEYYAGLAPALEGEQ-IP--L-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTAL 186 (488)
T ss_pred HHHHHHHHHHHHhcCce-ec--c-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHH
Confidence 99999998776543221 11 1 12345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++++.+.++.|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 187 ~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~ 266 (488)
T PRK13252 187 KLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLD 266 (488)
T ss_pred HHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHH
Confidence 999999998 99999999998656888899997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +.+++||++++.+++++.++++++. +
T Consensus 267 ~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 345 (488)
T PRK13252 267 RAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAE 345 (488)
T ss_pred HHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999996 4789999999999999999999985 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 346 Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~ 425 (488)
T PRK13252 346 GARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRA 425 (488)
T ss_pred CCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHH
Confidence 78999999642 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|.|+||+..... ..| +..|.||+||++
T Consensus 426 ~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (488)
T PRK13252 426 HRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGREN 463 (488)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCC
Confidence 999999999999999854322 223 667889999873
|
|
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=652.12 Aligned_cols=423 Identities=22% Similarity=0.314 Sum_probs=390.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus 26 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 105 (475)
T PRK13473 26 TGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIV 105 (475)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999888656999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+...... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 106 ~~~~~~a~~~~~~~g~~~~~~---~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~ 182 (475)
T PRK13473 106 DVFRFFAGAARCLEGKAAGEY---LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTAL 182 (475)
T ss_pred HHHHHHHHHHHHhcCcccccC---CCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999999887776543321110 12335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+|
T Consensus 183 ~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld 262 (475)
T PRK13473 183 KLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLD 262 (475)
T ss_pred HHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHH
Confidence 99999999999999999998 667888999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++. .
T Consensus 263 ~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 341 (475)
T PRK13473 263 AVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKAL 341 (475)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999 9999999999999999999999999999999999999996 5889999999999999999999985 4
Q ss_pred C-CeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~-~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
| +++++||... ..|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 342 G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~ 421 (475)
T PRK13473 342 GHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV 421 (475)
T ss_pred CCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 5 7999999864 3588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+...+.. .| +..+.||+||++
T Consensus 422 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 456 (475)
T PRK13473 422 SARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDM 456 (475)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCccccccCccc
Confidence 9999999999999766542 22 566888888874
|
|
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-83 Score=647.89 Aligned_cols=423 Identities=21% Similarity=0.337 Sum_probs=390.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..++
T Consensus 5 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~ 83 (454)
T cd07101 5 TGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVA 83 (454)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999986 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++++++.+.+++++........ .....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~ 162 (454)
T cd07101 84 IVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTAL 162 (454)
T ss_pred HHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999999888876543222111 1346789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++| +.+.+..|+.| +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 163 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl~ 241 (454)
T cd07101 163 WAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLD 241 (454)
T ss_pred HHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCHH
Confidence 999999998 99999999998 55678888876 6999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +
T Consensus 242 ~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~ 320 (454)
T cd07101 242 KAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAK 320 (454)
T ss_pred HHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999985 6
Q ss_pred CCeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
|+++++||... .+++|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 321 Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~ 400 (454)
T cd07101 321 GATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRI 400 (454)
T ss_pred CCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 78999998742 2478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh----hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV----IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~----~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+...+. ..| +..|.||+||++
T Consensus 401 ~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~ 438 (454)
T cd07101 401 AARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRH 438 (454)
T ss_pred HHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccc
Confidence 999999999999976541 123 677999999984
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-83 Score=651.01 Aligned_cols=420 Identities=22% Similarity=0.273 Sum_probs=387.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..+++.++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 25 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~ 103 (478)
T cd07085 25 TGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGL 103 (478)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+...+.. .... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~ 180 (478)
T cd07085 104 EVVEFACSIPHLLKGEY-LENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180 (478)
T ss_pred HHHHHHHHHHHHhCCee-cccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence 99999887665433322 1110 12345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++|||++
T Consensus 181 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~ 260 (478)
T cd07085 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLE 260 (478)
T ss_pred HHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHH
Confidence 999999998 99999999998777888999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 339 (478)
T cd07085 261 QTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEE 339 (478)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999984 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... .+|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus 340 Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~ 419 (478)
T cd07085 340 GAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA 419 (478)
T ss_pred CCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 88999998642 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCC
Q 013901 395 QQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLR 428 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~ 428 (434)
+++++++++|+|+||+++.+. ..| +..|.||+|+
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~ 456 (478)
T cd07085 420 RKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGD 456 (478)
T ss_pred HHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCC
Confidence 999999999999999875433 123 6678999994
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=650.38 Aligned_cols=422 Identities=26% Similarity=0.346 Sum_probs=387.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~--w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 28 t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 107 (476)
T cd07142 28 NGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPL 107 (476)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 67889999999999999999999999975 9999999999999999999999999999999999999999987669999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++.+.+...+... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 108 ~~~~l~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~ 183 (476)
T cd07142 108 AARLFRYYAGWADKIHGMTL-PA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLS 183 (476)
T ss_pred HHHHHHHHHHHHHHhcCccc-cc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHH
Confidence 99999999887765433211 11 112345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.+++ +++|+++|+|||||+||++|
T Consensus 184 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~d 263 (476)
T cd07142 184 ALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCED 263 (476)
T ss_pred HHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCC
Confidence 99999999999 99999999998 455788899886 9999999999999999999997 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.+++++
T Consensus 264 ADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~ 342 (476)
T cd07142 264 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEH 342 (476)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 57899999999999999999999
Q ss_pred hh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||... ..++|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 343 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a 422 (476)
T cd07142 343 GKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTA 422 (476)
T ss_pred HHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 85 677999999763 4688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+..... ..| +..|.||+|+++
T Consensus 423 ~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 460 (476)
T cd07142 423 NTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREK 460 (476)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccc
Confidence 999999999999999754333 223 567899999874
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-83 Score=646.87 Aligned_cols=424 Identities=28% Similarity=0.406 Sum_probs=389.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 84 (456)
T cd07110 6 TEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WDVDDVA 84 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++++++..+.+.............+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~ 164 (456)
T cd07110 85 GCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTEL 164 (456)
T ss_pred HHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHH
Confidence 99999999888764321111111112446788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 165 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dadl 244 (456)
T cd07110 165 ELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADL 244 (456)
T ss_pred HHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCCH
Confidence 999999999 99999999998 456788899997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.
T Consensus 245 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~ 323 (456)
T cd07110 245 EKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKE 323 (456)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999999965 789999999999999999999985
Q ss_pred hCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 ~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
.|+++++||..+ ..++|+.|||+.+++++|.++++|+||||++|++|+|++||++++|++++||+++|||+|.+.++
T Consensus 324 ~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 403 (456)
T cd07110 324 EGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCD 403 (456)
T ss_pred CCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence 677999999764 35889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++|+|+||+++... ..| +..+.||+|++
T Consensus 404 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 439 (456)
T cd07110 404 RVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRE 439 (456)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCCCCcccccCCcc
Confidence 99999999999999865332 122 56678888886
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-83 Score=639.43 Aligned_cols=409 Identities=62% Similarity=0.984 Sum_probs=377.3
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.+..+..+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58899999999999999999999999999999999999999999999999998865699999999999999887766543
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
.........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~ 162 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV 162 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence 21111111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhccc-CCCCc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQA 259 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~-~~Gq~ 259 (434)
++|+.+.+..|++|++|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.|++.+++++| . |+||.
T Consensus 163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~ 241 (432)
T cd07137 163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQA 241 (432)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCc
Confidence 999777888898888999999999999999999999999999999999999999999999999999999999 7 99999
Q ss_pred cCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccE
Q 013901 260 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 339 (434)
Q Consensus 260 C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Pt 339 (434)
|++++++|||++++++|+++|++++.++++|+|++++++||++++++++++.++++++..++++++||..+.+|+|++||
T Consensus 242 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Pt 321 (432)
T cd07137 242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPT 321 (432)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeE
Confidence 99999999999999999999999999999999977889999999999999999999997788999999765568999999
Q ss_pred EEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhh---
Q 013901 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI--- 416 (434)
Q Consensus 340 v~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~--- 416 (434)
|+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||+...+..
T Consensus 322 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~ 401 (432)
T cd07137 322 ILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDT 401 (432)
T ss_pred EEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred -hhhhhhhcCCCCcc
Q 013901 417 -MLALLKNHTLLRSC 430 (434)
Q Consensus 417 -~~~~~~~~~~~~~~ 430 (434)
.-+..+.||+||+.
T Consensus 402 ~PfGG~k~SG~G~~~ 416 (432)
T cd07137 402 LPFGGVGESGFGAYH 416 (432)
T ss_pred CCCCCcCcCcCCccc
Confidence 23667899999873
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-83 Score=649.44 Aligned_cols=422 Identities=20% Similarity=0.271 Sum_probs=389.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++.++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 22 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 100 (478)
T cd07086 22 NGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMI 100 (478)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+... ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 177 (478)
T cd07086 101 DICDYAVGLSRMLYGLTI-PSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177 (478)
T ss_pred HHHHHHHHHHHHhcCccc-ccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 999999988877543221 111 11335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-----lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.+++++.++ +|+|++|+++++.+.+..|..|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++|
T Consensus 178 ~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~d 257 (478)
T cd07086 178 AVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDD 257 (478)
T ss_pred HHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCC
Confidence 999999987 99999999998666778888887 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.+++++
T Consensus 258 Adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 336 (478)
T cd07086 258 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEI 336 (478)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999964 7899999999999999999999
Q ss_pred hh-hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 317 DK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 317 a~-~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+. .|+++++||.... .|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 337 a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~ 416 (478)
T cd07086 337 AKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416 (478)
T ss_pred HHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 95 6789999997643 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--cceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVET--VSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~--~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++++ +++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 417 ~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~ 459 (478)
T cd07086 417 EAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRES 459 (478)
T ss_pred HHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccc
Confidence 99999999 999999999976553 122 667888998874
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-83 Score=652.14 Aligned_cols=420 Identities=22% Similarity=0.333 Sum_probs=388.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++.+++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 103 (488)
T TIGR02299 25 TNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAA 103 (488)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+......+. .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~ 179 (488)
T TIGR02299 104 ENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAA 179 (488)
T ss_pred HHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHH
Confidence 999999988875443332221 1245678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|++++ +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 180 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl 259 (488)
T TIGR02299 180 RLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADL 259 (488)
T ss_pred HHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCH
Confidence 999999998 99999999998 566778899887 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.
T Consensus 260 ~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 338 (488)
T TIGR02299 260 ERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEK 338 (488)
T ss_pred HHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999999964 789999999999999999999985
Q ss_pred hCCeeeecCccC--------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 319 VSGKIVHGGERD--------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 319 ~~~~v~~gg~~~--------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
.|+++++||... .+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||++||||+|
T Consensus 339 ~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d 418 (488)
T TIGR02299 339 EGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND 418 (488)
T ss_pred CCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 578999998753 248899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
.+.++++++++++|+|+||+...+. ..| +..+.||+||+
T Consensus 419 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 459 (488)
T TIGR02299 419 VGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGRE 459 (488)
T ss_pred HHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCcc
Confidence 9999999999999999999866543 223 56789999987
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=639.77 Aligned_cols=414 Identities=45% Similarity=0.734 Sum_probs=381.8
Q ss_pred CCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHH
Q 013901 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93 (434)
Q Consensus 14 ~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~ 93 (434)
.+.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++..|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999987569999999999999988
Q ss_pred Hhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh
Q 013901 94 KHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172 (434)
Q Consensus 94 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a 172 (434)
+.+...+...... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~ 161 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY 161 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence 8775443222110 112346788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhc
Q 013901 173 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252 (434)
Q Consensus 173 lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~ 252 (434)
+|+|++|+++|+.+....|+.|++|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~ 241 (436)
T cd07135 162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF 241 (436)
T ss_pred CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh
Confidence 99999999998655566788888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCC
Q 013901 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN 332 (434)
Q Consensus 253 ~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~ 332 (434)
.|+||.|+++++||||++++++|+++|+++++++++|+|++++++||++++.+.+++.++++++ ++++++||..+.+
T Consensus 242 -~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~ 318 (436)
T cd07135 242 -GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEA 318 (436)
T ss_pred -ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCC
Confidence 9999999999999999999999999999999999999996688999999999999999999977 8899999987667
Q ss_pred CcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCc
Q 013901 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (434)
Q Consensus 333 ~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 412 (434)
|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|+|+||+.+
T Consensus 319 g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~ 398 (436)
T cd07135 319 TRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTL 398 (436)
T ss_pred CCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhh---h-hhhhhcCCCCcc
Q 013901 413 VHVIM---L-ALLKNHTLLRSC 430 (434)
Q Consensus 413 ~~~~~---~-~~~~~~~~~~~~ 430 (434)
++... | +..|.||+||+.
T Consensus 399 ~~~~~~~~PfGG~k~SG~G~~~ 420 (436)
T cd07135 399 IHVGVDNAPFGGVGDSGYGAYH 420 (436)
T ss_pred ccccCCCCCcCCcCcccCCccc
Confidence 55422 2 667899999984
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-83 Score=645.11 Aligned_cols=425 Identities=25% Similarity=0.368 Sum_probs=391.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~-~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..|++++++.|++|++.|+ ++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~ 85 (459)
T cd07089 6 TEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGP 85 (459)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 6788999999999999999999999999999 999999999999999999999999999999999999988765799999
Q ss_pred HHHHHHHHHHHHhhccccccccc-cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++.++++++.++.+......... ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~ 165 (459)
T cd07089 86 IGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLS 165 (459)
T ss_pred HHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999998887554422211 11124567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+.+++.++ +|+|++++++|+ .+.+..|+.|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++||
T Consensus 166 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~da 245 (459)
T cd07089 166 ALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDA 245 (459)
T ss_pred HHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECCCC
Confidence 99999999998 999999999984 45788899986 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++
T Consensus 246 dl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a 324 (459)
T cd07089 246 DLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARG 324 (459)
T ss_pred CHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999964 78999999999999999999998
Q ss_pred h-hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 318 K-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
. +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.
T Consensus 325 ~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~ 404 (459)
T cd07089 325 RDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDR 404 (459)
T ss_pred HHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence 5 6889999997643 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||+..... ..| +..+.||+|++
T Consensus 405 ~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~ 442 (459)
T cd07089 405 AYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRE 442 (459)
T ss_pred HHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCC
Confidence 9999999999999999876433 122 56688888876
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-83 Score=644.18 Aligned_cols=419 Identities=24% Similarity=0.345 Sum_probs=387.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 6 tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 84 (446)
T cd07106 6 TGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FEVGGAV 84 (446)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999987 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++++++... ...... ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~~~~~~---~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~ 158 (446)
T cd07106 85 AWLRYTASLDL---PDEVIE---DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTL 158 (446)
T ss_pred HHHHHHHhhhh---cCcccc---CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99998877652 111111 112456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
.+++++.+++|+|++++++++.+.+..|++|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.
T Consensus 159 ~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~ 238 (446)
T cd07106 159 KLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDA 238 (446)
T ss_pred HHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHH
Confidence 99999999999999999998767888899997 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-hC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VS 320 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~ 320 (434)
|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++. .|
T Consensus 239 aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 317 (446)
T cd07106 239 VAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKG 317 (446)
T ss_pred HHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999 9999999999999999999999999999999999999996 4889999999999999999999985 67
Q ss_pred CeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 321 GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 321 ~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
+++++||..+. .|+|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.+.++++++
T Consensus 318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~ 397 (446)
T cd07106 318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR 397 (446)
T ss_pred CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 89999997643 58899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 400 TVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 400 ~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++|+|+||+++.+.. .| +..+.||+||+.
T Consensus 398 ~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~ 430 (446)
T cd07106 398 RLEAGTVWINTHGALDPDAPFGGHKQSGIGVEF 430 (446)
T ss_pred hCCccEEEECCCCCCCCCCCCCCccccccCccc
Confidence 99999999999774432 22 567889999873
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-83 Score=652.74 Aligned_cols=419 Identities=21% Similarity=0.333 Sum_probs=390.7
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++
T Consensus 57 ~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i~ 135 (512)
T cd07124 57 SEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAID 135 (512)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999997 59999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++++++.++++... .... ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 136 ~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~ 211 (512)
T cd07124 136 FLEYYAREMLRLRGF-PVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAK 211 (512)
T ss_pred HHHHHHHHHHHhcCc-cccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHH
Confidence 999999998877322 1111 124567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc------ccCceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~------~~~p~~~e~gG~~~~iv~ 235 (434)
+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.+++ +++|+++|+|||||+||+
T Consensus 212 l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~ 291 (512)
T cd07124 212 LVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVD 291 (512)
T ss_pred HHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEEC
Confidence 99999998 99999999998 456788899997 9999999999999999999886 689999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|.+ .+++||++++.+++++.++|
T Consensus 292 ~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i 370 (512)
T cd07124 292 EDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYI 370 (512)
T ss_pred CCCCHHHHHHHHHHHHH-hhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999965 78999999999999999999
Q ss_pred HHhhhCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 315 DDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
+++..++++++||..+. +|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.
T Consensus 371 ~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 450 (512)
T cd07124 371 EIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSP 450 (512)
T ss_pred HHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 99977889999998754 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCC-Cc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLL-RS 429 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~-~~ 429 (434)
+.++++++++++|+|+||+.+++... | +..+.||+| |+
T Consensus 451 ~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~ 493 (512)
T cd07124 451 EHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKA 493 (512)
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcc
Confidence 99999999999999999997765532 3 667899999 65
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-83 Score=647.75 Aligned_cols=420 Identities=20% Similarity=0.295 Sum_probs=386.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 24 t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 102 (487)
T PRK09457 24 SGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAA-TEVTAMI 102 (487)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.+..+.++... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~ 178 (487)
T PRK09457 103 NKIAISIQAYHERTGEKRS----EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 178 (487)
T ss_pred HHHHHHHHHHHHhcCceec----cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999998888776543321 112445688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc-cCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~-~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++ .+++++|+|||||+||++|||+
T Consensus 179 ~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl 258 (487)
T PRK09457 179 LTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI 258 (487)
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCH
Confidence 999999999 99999999999777888999986 99999999999999999987755 5789999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcH-HHHHHHHHHHHhcccCCCCC--CCCcccccCCHHHHHHHHHHHHHh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~--~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
+.|++.+++++| .|+||.|+++++||||++++ ++|+++|+++++++++|+|. +.+++||++++.+++++.++++++
T Consensus 259 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a 337 (487)
T PRK09457 259 DAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQL 337 (487)
T ss_pred HHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999998 99999999999999999994 478999999999999999999998
Q ss_pred h-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. +|+++++||.. +.+++|++|||+ +++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 338 ~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~ 416 (487)
T PRK09457 338 LALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYD 416 (487)
T ss_pred HHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 5 58899998764 345799999999 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh--hh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+...+.. .| +..+.||+||++
T Consensus 417 ~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~ 454 (487)
T PRK09457 417 QFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPS 454 (487)
T ss_pred HHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCC
Confidence 999999999999998765542 12 666899999984
|
|
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-83 Score=650.79 Aligned_cols=422 Identities=18% Similarity=0.270 Sum_probs=385.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHh-cHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNE-REPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~-~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..+++++++.|++||+.|+++|.++|.++|+++++.|++ ++++|+.++++|+|||..++...|+..+
T Consensus 56 tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~ 135 (522)
T cd07123 56 HAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACEL 135 (522)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHH
Confidence 378899999999999999999999999999999999999999999999996 8999999999999999999876689999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++.+++++++.+.+........ ..+..++++++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.+
T Consensus 136 ~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~ 211 (522)
T cd07123 136 IDFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLS 211 (522)
T ss_pred HHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHH
Confidence 9999999988877654332111 1234578999998 999999999999999999999999 6999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccC------ceEEecCCCCce
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLT------PVLLELGGKSPV 232 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~------p~~~e~gG~~~~ 232 (434)
+..+++++.++ +|+|+||+++|+ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++ |+++|+|||||+
T Consensus 212 ~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~ 291 (522)
T cd07123 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFH 291 (522)
T ss_pred HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCee
Confidence 99999999998 999999999994 45788899886 9999999999999999999998877 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHH
Q 013901 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLS 311 (434)
Q Consensus 233 iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~ 311 (434)
||++|||+|.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|.+ .+++||++++.+++++.
T Consensus 292 IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~ 370 (522)
T cd07123 292 LVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIK 370 (522)
T ss_pred EECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999999999999999999965 78999999999999999
Q ss_pred HHHHHhh-h-CCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHHhcCC-CCcEEE
Q 013901 312 KLLDDDK-V-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGT-KPLAAY 385 (434)
Q Consensus 312 ~~i~~a~-~-~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~~ 385 (434)
++++++. . |+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| ++|+|+++|++. |||++|
T Consensus 371 ~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~ 450 (522)
T cd07123 371 GYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGA 450 (522)
T ss_pred HHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEE
Confidence 9999995 5 78999999764 3589999999999999999999999999999999984 799999999985 999999
Q ss_pred EecCCHHHHHHHHhhc--ceeeEEECCCchhhh---hh-hhhhhcCCC-Ccc
Q 013901 386 LFTNNKKLKQQFVETV--SAGGLVINDTAVHVI---ML-ALLKNHTLL-RSC 430 (434)
Q Consensus 386 i~t~d~~~~~~~~~~~--~~g~v~iN~~~~~~~---~~-~~~~~~~~~-~~~ 430 (434)
|||+|.++++++++++ ++|.|+||+.+++.. .| +..|.||+| |++
T Consensus 451 Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~ 502 (522)
T cd07123 451 IFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAG 502 (522)
T ss_pred EEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccC
Confidence 9999999999999996 599999999776542 23 667999996 774
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-83 Score=644.70 Aligned_cols=425 Identities=28% Similarity=0.429 Sum_probs=393.3
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus 4 ~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~ 82 (453)
T cd07099 4 ATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLA 82 (453)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999776 699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.+.++++...........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~ 162 (453)
T cd07099 83 LEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVG 162 (453)
T ss_pred HHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 99999999998887655432221112345678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
..+.+++.++ +|+|++++++|+.+.+..|++|++|.|.||||+.+++.|.+.++++++|+++|+|||||+||++|||++
T Consensus 163 ~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dadl~ 242 (453)
T cd07099 163 ELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLE 242 (453)
T ss_pred HHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHH
Confidence 9999999999 999999999996677888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++. .
T Consensus 243 ~a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ 321 (453)
T cd07099 243 RAAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAK 321 (453)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999996 5889999999999999999999985 6
Q ss_pred CCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||... .+|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.+++++++
T Consensus 322 ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~ 401 (453)
T cd07099 322 GAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIA 401 (453)
T ss_pred CCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 78999999765 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhhhh----hhhhhcCCCCc
Q 013901 399 ETVSAGGLVINDTAVHVIML----ALLKNHTLLRS 429 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~~ 429 (434)
+++++|.|+||+.+++...+ +..+.||+|++
T Consensus 402 ~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~ 436 (453)
T cd07099 402 RRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRR 436 (453)
T ss_pred HhCCeeeEEECCCCCCCCCCCCCCCCcccccCCcc
Confidence 99999999999987654322 45578888876
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-83 Score=650.70 Aligned_cols=420 Identities=21% Similarity=0.322 Sum_probs=389.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++.+++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 56 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 134 (511)
T TIGR01237 56 PSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEAD-AEVAEAI 134 (511)
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.+... .. ...+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 135 ~~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~ 211 (511)
T TIGR01237 135 DFCEYYAREMERLAGQGV-NL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAA 211 (511)
T ss_pred HHHHHHHHHHHHhcCccc-cC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999999888765321 11 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.+.+.++ ++++|+++|+|||||+||
T Consensus 212 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV 291 (511)
T TIGR01237 212 KIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIV 291 (511)
T ss_pred HHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEE
Confidence 999999998 99999999998 467888999987 999999999999999999887 578999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~ 313 (434)
++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+.+++.++
T Consensus 292 ~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~ 370 (511)
T TIGR01237 292 DESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEY 370 (511)
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996 57899999999999999999
Q ss_pred HHHhhhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 314 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 314 i~~a~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
++++...+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 371 i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~ 450 (511)
T TIGR01237 371 IEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRD 450 (511)
T ss_pred HHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 999976668999986533 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhhh---hh-hhhhhcCCCC
Q 013901 393 LKQQFVETVSAGGLVINDTAVHVI---ML-ALLKNHTLLR 428 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~~---~~-~~~~~~~~~~ 428 (434)
+++++++++++|+|+||+.+++.. .| +..+.||+|+
T Consensus 451 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 490 (511)
T TIGR01237 451 HIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS 490 (511)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC
Confidence 999999999999999999776542 22 5678888885
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-83 Score=640.94 Aligned_cols=419 Identities=21% Similarity=0.282 Sum_probs=386.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~--w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++++++.|++||+. |+. +.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~Ev~~ 83 (455)
T cd07120 6 TGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-FEISG 83 (455)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 67889999999999999999999999985 998 999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++++++..+...+... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 84 ~i~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~ 159 (455)
T cd07120 84 AISELRYYAGLARTEAGRMI-EP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQI 159 (455)
T ss_pred HHHHHHHHHHHHHHhcCccc-cc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHH
Confidence 99999999988877543221 10 123457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-h-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGE-Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~-a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.+ + +|+|++|++++ +.+.+..|++|+ +|.|.||||+.+++.+.+.+++++||+++|+|||||+||++|
T Consensus 160 ~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~d 239 (455)
T cd07120 160 NAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDD 239 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECCC
Confidence 9999999999 5 99999999998 456788899987 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||+|.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 240 aDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 240 ADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 58899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 317 DK-VSGKIVHGGER-DK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
+. .|+++++||.. +. +|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+|.
T Consensus 319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~ 398 (455)
T cd07120 319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL 398 (455)
T ss_pred HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 85 67899997754 32 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
+.++++++++++|.|+||++..+.. .| +..+.||+||+
T Consensus 399 ~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 438 (455)
T cd07120 399 ARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRL 438 (455)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCcc
Confidence 9999999999999999999765442 22 66688888886
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-83 Score=643.53 Aligned_cols=422 Identities=27% Similarity=0.351 Sum_probs=390.3
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~-~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
.+++.+++++..+..|++++++.|++|++.|. ++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 5 ~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~ 83 (454)
T cd07109 5 STGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-ADVEA 83 (454)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 36789999999999999999999999999876 99999999999999999999999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++++++..+.+.+... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 84 ~~~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 84 AARYFEYYGGAADKLHGETI-PL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHhcCccc-cc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999888776643221 11 123467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+.+++.++ +|+|++|++++ +.+.++.|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999998 99999999998 667889999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++++.+++.++++++.
T Consensus 240 Dl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999988899999999999999999999985
Q ss_pred -hCCeeeecCccC----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 -VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 -~~~~v~~gg~~~----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
.|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.
T Consensus 319 ~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~ 398 (454)
T cd07109 319 ARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDR 398 (454)
T ss_pred hCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHH
Confidence 678999998753 258899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhh--hh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~~ 430 (434)
++++++++++|.|+||+...+.. .| +..|.||+||++
T Consensus 399 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~ 438 (454)
T cd07109 399 ALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREK 438 (454)
T ss_pred HHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccc
Confidence 99999999999999998763332 22 566888888874
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-83 Score=644.84 Aligned_cols=420 Identities=20% Similarity=0.246 Sum_probs=382.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 21 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 99 (474)
T cd07130 21 NGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMI 99 (474)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+.. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~ 176 (474)
T cd07130 100 DICDFAVGLSRQLYGLT-IPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAI 176 (474)
T ss_pred HHHHHHHHhHHHhcCcc-ccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHH
Confidence 99999887766543321 1111 12344578899999999999999999999999999999999999999999999998
Q ss_pred HHHHHH----Hhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~----~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.+++++ .++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 177 ~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~d 256 (474)
T cd07130 177 AVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMED 256 (474)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCC
Confidence 888765 465 89999999998777788899987 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++.+++++.+++++
T Consensus 257 adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 335 (474)
T cd07130 257 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE 335 (474)
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999964 6899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||.. +.+|+|++|||+.++++ |.+++||+||||++|++|+|++||++++|+++|||+++|||+|.+++
T Consensus 336 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a 414 (474)
T cd07130 336 AKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNA 414 (474)
T ss_pred HHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 95 68899999986 33589999999988766 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--cceeeEEECCCchhh--hhh-hhhhhcCCCCc
Q 013901 395 QQFVET--VSAGGLVINDTAVHV--IML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~--~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~ 429 (434)
++++++ +++|+|+||+++... ..| +..+.||+||+
T Consensus 415 ~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~ 454 (474)
T cd07130 415 FRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRE 454 (474)
T ss_pred HHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCcc
Confidence 999987 999999999865433 223 67789999987
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-83 Score=650.40 Aligned_cols=421 Identities=23% Similarity=0.346 Sum_probs=389.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 60 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 138 (514)
T PRK03137 60 KSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAI 138 (514)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.+...... ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 139 ~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~ 215 (514)
T PRK03137 139 DFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAA 215 (514)
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999998887653322211 13456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc------ccCceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~------~~~p~~~e~gG~~~~iv 234 (434)
.+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|.||||+.+|+.+.+.+++ ++||+++|+|||||+||
T Consensus 216 ~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV 295 (514)
T PRK03137 216 KFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVV 295 (514)
T ss_pred HHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEE
Confidence 999999999 999999999984 57788899987 9999999999999999999886 68999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i 314 (434)
++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+..++||++++.+++++.+++
T Consensus 296 ~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v 374 (514)
T PRK03137 296 DEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYI 374 (514)
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999997644999999999999999999
Q ss_pred HHhhhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++||++++|++++||+++|||+|.++
T Consensus 375 ~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~ 454 (514)
T PRK03137 375 EIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREH 454 (514)
T ss_pred HHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99977789999997643 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCC-Cc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLL-RS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~-~~ 429 (434)
++++++++++|+|+||+.+++... | +..|.||+| |+
T Consensus 455 a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 495 (514)
T PRK03137 455 LEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKA 495 (514)
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999987665522 2 566888888 45
|
|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=640.75 Aligned_cols=423 Identities=22% Similarity=0.331 Sum_probs=387.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~-w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+.++++++++.|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 8 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 86 (455)
T cd07148 8 DLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK-VEVTRA 86 (455)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 67889999999999999999999999997 5689999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++.++++++.++.+.+........ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 87 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 166 (455)
T cd07148 87 IDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS 166 (455)
T ss_pred HHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHH
Confidence 999999999988875542211110 0113356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+..+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+++|+.+.+.++. .+|+++|+|||||+||++|||
T Consensus 167 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~~dAD 245 (455)
T cd07148 167 CLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVDRSAD 245 (455)
T ss_pred HHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEECCCCC
Confidence 99999999998 99999999998777788899886 9999999999999999998876 499999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.|++++| +|+||.|+++++||||++++|+|+++|++++.++++|+|. +++++||++++.+++++.++++++.
T Consensus 246 l~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 324 (455)
T cd07148 246 LDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAV 324 (455)
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 4789999999999999999999995
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++++|
T Consensus 325 ~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~ 403 (455)
T cd07148 325 AAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKA 403 (455)
T ss_pred hCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 678999999764 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh--hh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~~ 430 (434)
++++++|.|+||+++.+.. .| +..|.||+|++.
T Consensus 404 ~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~ 439 (455)
T cd07148 404 VRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGG 439 (455)
T ss_pred HHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCc
Confidence 9999999999998764331 22 667899999873
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-83 Score=643.52 Aligned_cols=423 Identities=27% Similarity=0.380 Sum_probs=387.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 86 (456)
T cd07145 8 NGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTI 86 (456)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccccc--ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+.++++++..+.+.+.. ..... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 87 ~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~ 165 (456)
T cd07145 87 RLFKLAAEEAKVLRGET-IPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLT 165 (456)
T ss_pred HHHHHHHHHHHHhcCcc-ccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999998776443321 11110 0112346788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++||
T Consensus 166 ~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~dA 245 (456)
T cd07145 166 AIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDA 245 (456)
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECCCC
Confidence 99999999998 99999999998 467788899987 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++
T Consensus 246 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 324 (456)
T cd07145 246 DLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDA 324 (456)
T ss_pred CHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 488999999999999999999998
Q ss_pred h-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 318 K-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
. +|+++++||..+. |+|++|||+.+++++|+++++|+||||++|++|+|++||++++|++++||+++|||+|.+.+++
T Consensus 325 ~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 403 (456)
T cd07145 325 VEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALK 403 (456)
T ss_pred HHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 5 6789999997653 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 397 FVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+++++++|+|+||+.+.+. ..| +..+.||+||+.
T Consensus 404 ~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~ 440 (456)
T cd07145 404 VARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREG 440 (456)
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCc
Confidence 9999999999999876432 122 566888998873
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=643.87 Aligned_cols=419 Identities=26% Similarity=0.372 Sum_probs=386.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 19 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~ 97 (465)
T cd07151 19 TGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKAN-IEWGAAM 97 (465)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999999999999987 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~- 162 (434)
+.+++++...+.+.... ... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 98 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~ 174 (465)
T cd07151 98 AITREAATFPLRMEGRI-LPS--DVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG 174 (465)
T ss_pred HHHHHHHHhHHHhcCcc-ccC--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHH
Confidence 99999988766542211 111 11244568899999999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||
T Consensus 175 ~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~daD 254 (465)
T cd07151 175 LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDAD 254 (465)
T ss_pred HHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 6889999998 99999999998 456788899997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +.+.+||++++.+++++.++++++.
T Consensus 255 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~ 333 (465)
T cd07151 255 IDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAV 333 (465)
T ss_pred HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 4789999999999999999999985
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. .|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.++++++
T Consensus 334 ~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~ 411 (465)
T cd07151 334 EEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411 (465)
T ss_pred hCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHH
Confidence 67899999875 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRS 429 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~ 429 (434)
++++++|+|+||+.+.+. ..| +..+.||+||+
T Consensus 412 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~ 446 (465)
T cd07151 412 ARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRF 446 (465)
T ss_pred HHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcC
Confidence 999999999999977653 223 56789999987
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-83 Score=641.15 Aligned_cols=417 Identities=24% Similarity=0.325 Sum_probs=384.5
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..+++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999886 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-H
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS-S 163 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~-~ 163 (434)
.++++++......+.. ... ..+..++.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ .
T Consensus 80 ~l~~~~~~~~~~~~~~-~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQGEI-LPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCCcc-ccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 9999987665433211 111 1345678899999999999999999999999999999999999999999999996 6
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+++.+.+.+++++||+++|+|||||+||++|||++
T Consensus 156 ~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 156 VIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 889999998 99999999998777888899887 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +.+++||++++.+++++.++++++. .
T Consensus 236 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 314 (443)
T cd07152 236 LAASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA 314 (443)
T ss_pred HHHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999996 4789999999999999999999985 6
Q ss_pred CCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 320 ~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|++||++++|++++||+++|||+|.++++++++
T Consensus 315 Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 315 GARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred CCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 7899999875 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeeEEECCCchhhh--hh-hhhhhcCCC-Cc
Q 013901 400 TVSAGGLVINDTAVHVI--ML-ALLKNHTLL-RS 429 (434)
Q Consensus 400 ~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~-~~ 429 (434)
++++|.|+||+++.+.. .| +..+.||+| ++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~ 426 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRF 426 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCCcc
Confidence 99999999999776541 22 556888888 65
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-83 Score=646.13 Aligned_cols=420 Identities=24% Similarity=0.325 Sum_probs=383.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+|||..++...|+..++
T Consensus 25 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 104 (479)
T cd07116 25 TGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAI 104 (479)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999998756999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+....... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 105 ~~~~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~ 180 (479)
T cd07116 105 DHFRYFAGCIRAQEGSIS-EI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASIL 180 (479)
T ss_pred HHHHHHHHhHHHcCCeee-cC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999988765432211 10 12335678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC----
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG---- 237 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d---- 237 (434)
.+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|
T Consensus 181 ~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~ 260 (479)
T cd07116 181 VLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDA 260 (479)
T ss_pred HHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecCcccc
Confidence 99999999999999999998 567888999987 999999999999999999999999999999999999999998
Q ss_pred --CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHH
Q 013901 238 --INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 238 --ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 314 (434)
||++.|++.++++ + +|+||.|+++++||||++++++|+++|+++++++++|+|.+ .+.+||++++++++++.+++
T Consensus 261 ~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i 338 (479)
T cd07116 261 DDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYI 338 (479)
T ss_pred cccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 7999999999985 6 68999999999999999999999999999999999999964 78999999999999999999
Q ss_pred HHhh-hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEec
Q 013901 315 DDDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t 388 (434)
+++. +|+++++||... ..|+|+.|||+.+++ +|.+++||+||||++|++|+|++|||+++|++++||+++|||
T Consensus 339 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t 417 (479)
T cd07116 339 DIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWT 417 (479)
T ss_pred HHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEc
Confidence 9985 577999999753 258899999999874 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 389 NNKKLKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 389 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
+|.++++++++++++|.|+||++..... .| +..|.||+||++
T Consensus 418 ~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 461 (479)
T cd07116 418 RDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGREN 461 (479)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccC
Confidence 9999999999999999999998654432 23 677999999984
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=642.48 Aligned_cols=423 Identities=22% Similarity=0.330 Sum_probs=392.2
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+.++++.+++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 4 ~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~ 82 (452)
T cd07102 4 IDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGM 82 (452)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999996 799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.++.+.+...... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 159 (452)
T cd07102 83 LERARYMISIAEEALADIRVPE---KDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCG 159 (452)
T ss_pred HHHHHHHHHHHHHhcCCcccCC---CCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence 9999999998887765433221 1244578899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 160 ~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl 239 (452)
T cd07102 160 ERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239 (452)
T ss_pred HHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCH
Confidence 9999999999 99999999999668889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+.+++.++++++.
T Consensus 240 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ 318 (452)
T cd07102 240 DAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIA 318 (452)
T ss_pred HHHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999999999996 4789999999999999999999984
Q ss_pred hCCeeeecCcc----CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 VSGKIVHGGER----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 ~~~~v~~gg~~----~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
.|+++++||.. +..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 319 ~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 398 (452)
T cd07102 319 KGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARA 398 (452)
T ss_pred CCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 67899999874 23689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||++.... ..| +..|+||+||++
T Consensus 399 ~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~ 436 (452)
T cd07102 399 EALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTL 436 (452)
T ss_pred HHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccc
Confidence 999999999999999876433 122 567889999874
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=645.08 Aligned_cols=421 Identities=25% Similarity=0.323 Sum_probs=387.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+++.+++++..+..+++++++.|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 31 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~ 110 (481)
T cd07141 31 TGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLP 110 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 5788999999999999999999999998 6999999999999999999999999999999999999999777557999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.+++.+++++++.+.+.+... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 111 ~~~~~l~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~ 186 (481)
T cd07141 111 GAIKVLRYYAGWADKIHGKTI-PM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPL 186 (481)
T ss_pred HHHHHHHHHHHHHHHhcCcee-cC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcH
Confidence 999999999988877654321 11 11234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|+||||+.+++.+.+.++. ++||+++|+|||||+||++
T Consensus 187 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~ 266 (481)
T cd07141 187 TALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFA 266 (481)
T ss_pred HHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECC
Confidence 999999999998 99999999998 456778899987 9999999999999999999886 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|.+ .+++||++++.+++++.++++
T Consensus 267 dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 345 (481)
T cd07141 267 DADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIE 345 (481)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999965 789999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. .|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.++
T Consensus 346 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~ 425 (481)
T cd07141 346 SGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDK 425 (481)
T ss_pred HHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHH
Confidence 985 677999999863 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||++.... ..| +..|.||+|++
T Consensus 426 a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 463 (481)
T cd07141 426 AITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRE 463 (481)
T ss_pred HHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCcc
Confidence 9999999999999999865333 123 56688999987
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=635.77 Aligned_cols=405 Identities=47% Similarity=0.817 Sum_probs=373.4
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
+.+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++..|+..+++.++++++.++.+.+..
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56889999999999999999999999999999999999999999999999999975699999999999999988876553
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
.........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~ 161 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV 161 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence 22211111244678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C 260 (434)
++|+.+.+..|++|++|.|.||||+++|+.+.+.++++++|+++|+|||||+||++|||+|.|++.+++++| .|+||.|
T Consensus 162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C 240 (449)
T cd07136 162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTC 240 (449)
T ss_pred EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcc
Confidence 999777788898778999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEE
Q 013901 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (434)
Q Consensus 261 ~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv 340 (434)
+++++||||++++++|+++|+++++++++|+|.+++++||++++.+.+++.++++++ ++++||..+.+|+|+.|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a----~~~~gG~~~~~g~~~~Ptv 316 (449)
T cd07136 241 VAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG----KIVFGGNTDRETLYIEPTI 316 (449)
T ss_pred cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc----eEEECCCcCCCCCEEeeEE
Confidence 999999999999999999999999999999997788999999999999999999854 8999997755689999999
Q ss_pred EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhh----
Q 013901 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI---- 416 (434)
Q Consensus 341 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~---- 416 (434)
+.+++++|.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||+...+..
T Consensus 317 l~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~ 396 (449)
T cd07136 317 LDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL 396 (449)
T ss_pred EecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998764432
Q ss_pred hhhhhhhcCCCCcc
Q 013901 417 MLALLKNHTLLRSC 430 (434)
Q Consensus 417 ~~~~~~~~~~~~~~ 430 (434)
.-+..+.||+||+.
T Consensus 397 PfGG~k~SG~G~~~ 410 (449)
T cd07136 397 PFGGVGNSGMGSYH 410 (449)
T ss_pred CccCcCcccCCccc
Confidence 22666899999873
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-82 Score=643.47 Aligned_cols=421 Identities=24% Similarity=0.348 Sum_probs=388.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~ 101 (467)
T TIGR01804 22 NQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIA 101 (467)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999998557999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...+.. .... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 102 ~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 177 (467)
T TIGR01804 102 DVFEFFAGLADKDGGEI-IPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTAL 177 (467)
T ss_pred HHHHHHHHHHHHhCCcc-ccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHH
Confidence 99999998877643321 1111 1234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~dADl 257 (467)
T TIGR01804 178 KVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDDADL 257 (467)
T ss_pred HHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCCCCH
Confidence 999999998 999999999985 67888899997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.++++++.
T Consensus 258 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 336 (467)
T TIGR01804 258 ELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKE 336 (467)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999885
Q ss_pred hCCeeeecCccCC-----CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~~~-----~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
.|+++++||.... .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.++
T Consensus 337 ~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 416 (467)
T TIGR01804 337 EGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGR 416 (467)
T ss_pred CCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 6789999997532 48899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++|++++++|+|+||+..... ..| +..|.||+||+
T Consensus 417 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 454 (467)
T TIGR01804 417 AHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRE 454 (467)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCC
Confidence 9999999999999999865443 223 56789999987
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=642.12 Aligned_cols=421 Identities=26% Similarity=0.355 Sum_probs=388.8
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++.++.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 5 ~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~ 83 (457)
T cd07090 5 ATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-VDIDSS 83 (457)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999886 699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+..++++++..+.+.+.. ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 84 ADCLEYYAGLAPTLSGEH-VPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHhCCee-ecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 999999998877643221 111 1245678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl 239 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence 9999999999 99999999998767888899997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++|+++.
T Consensus 240 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 318 (457)
T cd07090 240 ENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ 318 (457)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5789999999999999999999985
Q ss_pred hCCeeeecCccC------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 319 VSGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 319 ~~~~v~~gg~~~------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
.|+++++||... .+|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~ 398 (457)
T cd07090 319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398 (457)
T ss_pred CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence 678999999753 24889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
.++++++++++|.|+||+..... ..| +..+.||+||+
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 437 (457)
T cd07090 399 RAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRE 437 (457)
T ss_pred HHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCcc
Confidence 99999999999999999854333 122 56688888887
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-82 Score=636.47 Aligned_cols=406 Identities=23% Similarity=0.364 Sum_probs=376.5
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~ 98 (434)
++.+++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++...+++..
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999999999999999999999999997 6999999999999999888765
Q ss_pred ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCc
Q 013901 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177 (434)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g~ 177 (434)
...... .+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++ +|+|+
T Consensus 80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv 155 (429)
T cd07100 80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV 155 (429)
T ss_pred CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence 443322 1345788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCC
Q 013901 178 IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 256 (434)
Q Consensus 178 v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~ 256 (434)
+|+++++.+.+..|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.|++++| +|+
T Consensus 156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~ 234 (429)
T cd07100 156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNA 234 (429)
T ss_pred EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 999998667778899986 999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccC-CCC
Q 013901 257 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD-KNK 333 (434)
Q Consensus 257 Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~-~~~ 333 (434)
||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +|+++++||... ..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 9999999999999999999999999999999999996 4789999999999999999999985 678999999764 358
Q ss_pred cccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCch
Q 013901 334 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413 (434)
Q Consensus 334 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~ 413 (434)
+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++++++++|.|+||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred hhh-hh-hhhhhcCCCCcc
Q 013901 414 HVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 414 ~~~-~~-~~~~~~~~~~~~ 430 (434)
... .| +..+.||+||+.
T Consensus 395 ~~~~~pfGG~~~SG~G~~~ 413 (429)
T cd07100 395 SDPRLPFGGVKRSGYGREL 413 (429)
T ss_pred CCCCCCcCCccccccCCcc
Confidence 331 22 566888888873
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-82 Score=642.44 Aligned_cols=417 Identities=26% Similarity=0.390 Sum_probs=386.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 23 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~ 102 (466)
T cd07138 23 TEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGI 102 (466)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999988656899999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+..... ....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~ 174 (466)
T cd07138 103 GHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174 (466)
T ss_pred HHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence 999999988776543221 234677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 175 ~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl 254 (466)
T cd07138 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDADL 254 (466)
T ss_pred HHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence 999999999 999999999984 45788899997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 255 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~ 333 (466)
T cd07138 255 EKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIE 333 (466)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 4889999999999999999999985
Q ss_pred hCCeeeecCccC----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 ~~~~v~~gg~~~----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
.|+++++||... ..|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+++
T Consensus 334 ~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a 413 (466)
T cd07138 334 EGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERA 413 (466)
T ss_pred CCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 678999998642 2589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+.......| +..+.||+||+
T Consensus 414 ~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG~G~~ 449 (466)
T cd07138 414 RAVARRLRAGQVHINGAAFNPGAPFGGYKQSGNGRE 449 (466)
T ss_pred HHHHHhcCcceEEECCCCCCCCCCcCCcccccCCcc
Confidence 999999999999999854322223 55688888887
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-82 Score=644.76 Aligned_cols=421 Identities=21% Similarity=0.314 Sum_probs=390.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..++
T Consensus 42 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 120 (500)
T cd07083 42 PSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAI 120 (500)
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478899999999999999999999999999999999999999999999999999999999999999999975 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.+..+......... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~ 198 (500)
T cd07083 121 DFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGY 198 (500)
T ss_pred HHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHH
Confidence 9999999998877654322111 13456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc------CceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~------~p~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.+++++ +|+++|+|||||+||
T Consensus 199 ~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV 278 (500)
T cd07083 199 KVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIV 278 (500)
T ss_pred HHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEE
Confidence 999999999 99999999998 567788899887 999999999999999999998876 999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~ 313 (434)
++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|.+ .+++||++++.+++++.++
T Consensus 279 ~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~ 357 (500)
T cd07083 279 DETADFELVVEGVVVSAF-GFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSY 357 (500)
T ss_pred CCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999999964 7899999999999999999
Q ss_pred HHHhhhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCC
Q 013901 314 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 314 i~~a~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
++++..++++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+ |++|||+++|++++||+++|||+|
T Consensus 358 i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d 437 (500)
T cd07083 358 IEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRK 437 (500)
T ss_pred HHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCC
Confidence 999977779999997643 58899999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
.+.++++++++++|+|+||+.+++... | +..+.||+|+
T Consensus 438 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 479 (500)
T cd07083 438 REHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479 (500)
T ss_pred HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC
Confidence 999999999999999999998766532 3 5668888883
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-82 Score=640.27 Aligned_cols=421 Identities=26% Similarity=0.358 Sum_probs=388.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i 85 (453)
T cd07115 6 TGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAA 85 (453)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999766999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++.+.+...+... .. ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~ 161 (453)
T cd07115 86 DTFRYYAGWADKIEGEVI-PV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSAL 161 (453)
T ss_pred HHHHHHHHHHHHhcCcee-cC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 999999887765433211 11 12456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|+++++++ +.+.++.|+.|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 162 ~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl 241 (453)
T cd07115 162 RIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADL 241 (453)
T ss_pred HHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCH
Confidence 999999998 99999999998 456778899887 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++|+++.
T Consensus 242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 242 DAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5789999999999999999999985
Q ss_pred hCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
.|+++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.+++|
T Consensus 321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~ 400 (453)
T cd07115 321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV 400 (453)
T ss_pred CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence 5779999997643 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++|+|+||+...+.. .| +..+.||+|++
T Consensus 401 ~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~ 434 (453)
T cd07115 401 AAALKAGTVWINTYNRFDPGSPFGGYKQSGFGRE 434 (453)
T ss_pred HHhcCccEEEECCCCCCCCCCCCCCcccccCCcC
Confidence 9999999999998554331 12 56688888876
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-82 Score=642.71 Aligned_cols=423 Identities=23% Similarity=0.327 Sum_probs=390.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~--w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..+++.++++|++|++. |+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus 23 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~ 102 (471)
T cd07139 23 TEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPG 102 (471)
T ss_pred CCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 67889999999999999999999999985 9999999999999999999999999999999999999998876669999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++..++++++..+.+......... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~ 179 (471)
T cd07139 103 PAALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLD 179 (471)
T ss_pred HHHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHH
Confidence 999999999888776443322111 24456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+..+.+++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+++.+.+.++++++|+++|+||+||+||++|||
T Consensus 180 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~dAD 259 (471)
T cd07139 180 AYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDAD 259 (471)
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECCCCC
Confidence 99999999999 99999999998777888899887 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.
T Consensus 260 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 338 (471)
T cd07139 260 LDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGR 338 (471)
T ss_pred HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999964 789999999999999999999885
Q ss_pred -hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 -VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 -~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++||..+. .++|+.|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.+
T Consensus 339 ~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~ 418 (471)
T cd07139 339 AEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERG 418 (471)
T ss_pred HCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence 6779999997543 488999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|.|+||++......| +..++||+||++
T Consensus 419 ~~~~~~l~~G~v~iN~~~~~~~~PfgG~k~SG~G~~~ 455 (471)
T cd07139 419 LAVARRIRTGTVGVNGFRLDFGAPFGGFKQSGIGREG 455 (471)
T ss_pred HHHHHhCCcceEEECCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999876332333 567899999874
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-82 Score=638.83 Aligned_cols=422 Identities=24% Similarity=0.358 Sum_probs=386.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh--cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~--w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+.+|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~ 84 (454)
T cd07118 6 HGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIEG 84 (454)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 67889999999999999999999999985 9999999999999999999999999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++...+.+.+.. ... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 85 ~i~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 85 AADLWRYAASLARTLHGDS-YNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHhcCcc-ccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 9999998888665543321 111 0123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+.+++.++ +|+|++++++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 99999999999 999999999984 45788899987 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 242 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (454)
T cd07118 242 DLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAG 320 (454)
T ss_pred CHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 478999999999999999999998
Q ss_pred h-hCCeeeecCccCC--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 318 K-VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
. .|+++++||.... .|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.+
T Consensus 321 ~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~ 400 (454)
T cd07118 321 RAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTA 400 (454)
T ss_pred HhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHH
Confidence 5 5779999998653 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|.|+||+..... ..| +..+.||+|+++
T Consensus 401 ~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~ 438 (454)
T cd07118 401 LTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGREL 438 (454)
T ss_pred HHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCc
Confidence 999999999999999866533 112 556788888763
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-82 Score=640.07 Aligned_cols=420 Identities=23% Similarity=0.366 Sum_probs=389.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 86 (451)
T cd07150 8 DGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-FETTFTP 86 (451)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999986 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+...+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 87 ~~l~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~ 163 (451)
T cd07150 87 ELLRAAAGECRRVRGETL-PSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGL 163 (451)
T ss_pred HHHHHHHHHHHHhcCccc-cCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHH
Confidence 999999988876543221 111 12456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|++++ +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 164 ~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl 243 (451)
T cd07150 164 KIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADL 243 (451)
T ss_pred HHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCh
Confidence 999999998 99999999998 467788899886 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ .+++||++++.+++++.++++++.
T Consensus 244 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 322 (451)
T cd07150 244 DYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVA 322 (451)
T ss_pred HHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999999965 789999999999999999999985
Q ss_pred hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 319 ~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
+|+++++||.. +|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+|.+++++++
T Consensus 323 ~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~ 400 (451)
T cd07150 323 KGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLA 400 (451)
T ss_pred CCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 67899999865 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhh--hh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~~ 430 (434)
+++++|.|+||+++.+.. .| +..++||+||++
T Consensus 401 ~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~ 435 (451)
T cd07150 401 ERLESGMVHINDPTILDEAHVPFGGVKASGFGREG 435 (451)
T ss_pred HhcCcCEEEECCCCCCCCCCCCcCCccccccCcCC
Confidence 999999999999876642 23 677899999883
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-82 Score=640.25 Aligned_cols=421 Identities=26% Similarity=0.331 Sum_probs=385.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-hcC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-~w~-~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++.++..+++++++.|++||+ .|+ .+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus 31 t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~ 110 (481)
T cd07143 31 TGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQA 110 (481)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 5788999999999999999999999998 599 99999999999999999999999999999999999997665569999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++++.+...+... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 111 ~~~~~~~~a~~a~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 186 (481)
T cd07143 111 SADTFRYYGGWADKIHGQVI-ET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLS 186 (481)
T ss_pred HHHHHHHHHHHHHHhcCccc-cC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHH
Confidence 99999999888775433221 11 123456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.+.+.+++ +++|+++|+|||||+||++|
T Consensus 187 ~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~d 266 (481)
T cd07143 187 ALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDD 266 (481)
T ss_pred HHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCC
Confidence 99999999998 999999999984 56788899986 9999999999999999999885 78999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|++
T Consensus 267 ADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 345 (481)
T cd07143 267 ADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIES 345 (481)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 57899999999999999999999
Q ss_pred hh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. .|+++++||..+ ..|+|+.|||+.++++++++++||+||||++|++|+|++||++++|++++||++||||+|.+.+
T Consensus 346 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 425 (481)
T cd07143 346 GKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA 425 (481)
T ss_pred HHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 85 678999999864 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+...+.. .| +..+.||+|++
T Consensus 426 ~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 462 (481)
T cd07143 426 IRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRE 462 (481)
T ss_pred HHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcc
Confidence 9999999999999998654331 22 55688888886
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-82 Score=641.39 Aligned_cols=421 Identities=24% Similarity=0.380 Sum_probs=389.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 100 (468)
T cd07088 22 TGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTA 100 (468)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++.+.+...+.. ... ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~l~~~~~~a~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~ 177 (468)
T cd07088 101 DYIDYMAEWARRIEGEI-IPS--DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL 177 (468)
T ss_pred HHHHHHHHHHHHhCCcc-ccC--ccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999988776653322 111 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 178 ~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl 257 (468)
T cd07088 178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADL 257 (468)
T ss_pred HHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence 999999998 999999999985 45778899987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.
T Consensus 258 ~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 336 (468)
T cd07088 258 DLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVE 336 (468)
T ss_pred HHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999964 789999999999999999999984
Q ss_pred hCCeeeecCccCC--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 319 VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 319 ~~~~v~~gg~~~~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
+|+++++||..+. .|+|++|||+.+++++|.++++|+||||++|++|+|++||++++|++++||+++|||+|.+++++
T Consensus 337 ~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 416 (468)
T cd07088 337 AGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416 (468)
T ss_pred CCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 6889999997643 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhhhh-h-hhhhhcCCCCc
Q 013901 397 FVETVSAGGLVINDTAVHVIM-L-ALLKNHTLLRS 429 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~~~-~-~~~~~~~~~~~ 429 (434)
+++++++|+|+||++..+... + +..|.||+||+
T Consensus 417 ~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~ 451 (468)
T cd07088 417 ATNELEFGETYINRENFEAMQGFHAGWKKSGLGGA 451 (468)
T ss_pred HHHhCCcceEEECCCCCCCCCCCcCCcccccCCcC
Confidence 999999999999997755422 2 67789999987
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-82 Score=639.63 Aligned_cols=427 Identities=28% Similarity=0.426 Sum_probs=389.6
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+..|++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||+.+++..|+..+
T Consensus 4 ~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~ 83 (465)
T cd07098 4 ATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVT 83 (465)
T ss_pred CCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999977799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++..+.+.............+..++++++|+||+++|+|||||+..++.++++||++||+||+|||+.+|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~ 163 (465)
T cd07098 84 CEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSS 163 (465)
T ss_pred HHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHH
Confidence 99999999887765543322211111234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH----Hhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 163 SLLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 163 ~~l~~~~----~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
..+++++ .++ +|+|++|+++|+.+.+..|+.|+ ++.|.||||+.+++.+.+.++++++|+++|+|||||+||++
T Consensus 164 ~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~ 243 (465)
T cd07098 164 GFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLD 243 (465)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC
Confidence 8876665 466 99999999999668889999997 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++
T Consensus 244 dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 322 (465)
T cd07098 244 DADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVA 322 (465)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecC
Q 013901 316 DDK-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~ 389 (434)
++. .|+++++||... ..|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|++++||+++|||+
T Consensus 323 ~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~ 402 (465)
T cd07098 323 DAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGK 402 (465)
T ss_pred HHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence 985 678999998642 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEECCCchhhh---hh-hhhhhcCCCCcc
Q 013901 390 NKKLKQQFVETVSAGGLVINDTAVHVI---ML-ALLKNHTLLRSC 430 (434)
Q Consensus 390 d~~~~~~~~~~~~~g~v~iN~~~~~~~---~~-~~~~~~~~~~~~ 430 (434)
|.+.++++++++++|.|+||+.+++.. .| +..++||+||+.
T Consensus 403 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~ 447 (465)
T cd07098 403 DIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFA 447 (465)
T ss_pred CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccC
Confidence 999999999999999999998664432 23 677999999973
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-82 Score=644.63 Aligned_cols=421 Identities=20% Similarity=0.272 Sum_probs=384.9
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
++.+++++..+..|++++++.|++||+.|+.+|..+|.++|+++++.|+ +++++|++++++|+||+..+++..++..++
T Consensus 57 g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i 136 (533)
T TIGR01236 57 QAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELI 136 (533)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHH
Confidence 6889999999999999999999999999999999999999999999999 599999999999999999999754599999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.+++++++.+.+.+..... ...+..+++.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|.++
T Consensus 137 ~~~~~~a~~a~~~~~~~~~~---~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~ 212 (533)
T TIGR01236 137 DFFRFNVKYARELYEQQPSE---SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSN 212 (533)
T ss_pred HHHHHHHHHHHHhcCccccC---CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHH
Confidence 99999998887765432211 11245678999999 999999999999999999999999 89999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCc------eEEecCCCCceE
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVV 233 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p------~~~e~gG~~~~i 233 (434)
..+.+++.++ +|+|++|+++|+ .+.++.|+.|+ ++.|.||||+.+|+.|.+.++++++| +++|+|||||+|
T Consensus 213 ~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~I 292 (533)
T TIGR01236 213 YLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHV 292 (533)
T ss_pred HHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEE
Confidence 9999999998 999999999984 67788999987 99999999999999999999988874 999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHH
Q 013901 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSK 312 (434)
Q Consensus 234 v~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~ 312 (434)
|++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+
T Consensus 293 V~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~ 371 (533)
T TIGR01236 293 VHPSADIDHAVTATIRGAF-EYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVK 371 (533)
T ss_pred ECCCCCHHHHHHHHHHHHH-hhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 4789999999999999999
Q ss_pred HHHHhhh-C--CeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHH-hcCCCCcEEE
Q 013901 313 LLDDDKV-S--GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAY 385 (434)
Q Consensus 313 ~i~~a~~-~--~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~ 385 (434)
+++++.. | +++++||... ..|+|++|||+.+++++|++++||+||||++|++|+| ++||++++ |+++|||+++
T Consensus 372 ~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~ 451 (533)
T TIGR01236 372 YIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGA 451 (533)
T ss_pred HHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEE
Confidence 9999964 3 5999999764 3589999999999999999999999999999999998 49999999 8899999999
Q ss_pred EecCCHHHHHHHHhhcc--eeeEEECCCchhhhh---h-hhhhhcCCC-Ccc
Q 013901 386 LFTNNKKLKQQFVETVS--AGGLVINDTAVHVIM---L-ALLKNHTLL-RSC 430 (434)
Q Consensus 386 i~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~---~-~~~~~~~~~-~~~ 430 (434)
|||+|.+++.+++++++ +|.|+||+.+++... | +..+.||+| |++
T Consensus 452 Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~ 503 (533)
T TIGR01236 452 VFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAG 503 (533)
T ss_pred EEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccC
Confidence 99999999999999977 999999987665532 2 566889998 764
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-82 Score=641.22 Aligned_cols=422 Identities=24% Similarity=0.352 Sum_probs=389.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|++++++.|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus 44 tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~ 123 (494)
T PRK09847 44 TQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPG 123 (494)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5788999999999999999999999997 59999999999999999999999999999999999999998876569999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++++++.++.+.+... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 124 ~~~~l~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 199 (494)
T PRK09847 124 AARAIRWYAEAIDKVYGEVA-TT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199 (494)
T ss_pred HHHHHHHHHHHHHHhcCccc-cC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence 99999999998887654321 11 123456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++ .+++|+++|+||+||+||.+|
T Consensus 200 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~d 279 (494)
T PRK09847 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFAD 279 (494)
T ss_pred HHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCC
Confidence 99999999998 99999999998 567788899887 999999999999999999988 588999999999999999999
Q ss_pred C-CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 238 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 238 a-d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+ |++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 280 aaDl~~Aa~~i~~~~~-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~ 358 (494)
T PRK09847 280 CPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIR 358 (494)
T ss_pred ccCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence 7 99999999999999 9999999999999999999999999999999999999996 4789999999999999999999
Q ss_pred HhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 316 ~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
++...+++++||..+..+.|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 359 ~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~ 438 (494)
T PRK09847 359 EGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAH 438 (494)
T ss_pred HHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99755599999977556889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+.+... ..| +..|.||+||++
T Consensus 439 ~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 475 (494)
T PRK09847 439 RMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDK 475 (494)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccc
Confidence 99999999999999865433 223 667899999873
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-82 Score=641.59 Aligned_cols=422 Identities=27% Similarity=0.364 Sum_probs=387.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhh-cCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~-w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..+++.+++.|++|++. |+++|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+
T Consensus 32 tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~ 111 (484)
T cd07144 32 TGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEI 111 (484)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 57889999999999999999999999996 88999999999999999999999999999999999999877645699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.+++++++.+.+.+.. ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 112 ~~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 187 (484)
T cd07144 112 IAVIRYYAGWADKIQGKT-IPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL 187 (484)
T ss_pred HHHHHHHHHHHHHhcCce-ecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999887763322 111 1233467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||
T Consensus 188 ~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dAD 267 (484)
T cd07144 188 LYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDAD 267 (484)
T ss_pred HHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCC
Confidence 9999999999 99999999998 567788899987 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhc-ccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
++.|++.+++++| +|+||.|+++++||||++++++|+++|++++.+ +++|+|. +++++||++++.+++++.++++++
T Consensus 268 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a 346 (484)
T cd07144 268 LDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKG 346 (484)
T ss_pred HHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999995 8999996 578999999999999999999998
Q ss_pred h-hCCeeeecCccCC----CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 K-VSGKIVHGGERDK----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~----~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
. .|+++++||.... .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 347 ~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~ 426 (484)
T cd07144 347 KKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR 426 (484)
T ss_pred HHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 5 6789999997643 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
.+++|++++++|+|+||+.+.+. ..| +..|.||+|++.
T Consensus 427 ~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 466 (484)
T cd07144 427 RAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGREL 466 (484)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCc
Confidence 99999999999999999876543 223 567888998873
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-82 Score=640.52 Aligned_cols=421 Identities=28% Similarity=0.365 Sum_probs=386.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcC--CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGK--TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~--~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..+++.+++.|++|++.|+ ++|.++|.++|+++++.|.+++++|++++++|+|||..++...|+..
T Consensus 28 t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~ 107 (476)
T cd07091 28 TEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVAL 107 (476)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5788999999999999999999999999855 99999999999999999999999999999999999997776579999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++..+++++++.+...+.. ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 108 ~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~ 183 (476)
T cd07091 108 SIKCLRYYAGWADKIQGKT-IPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183 (476)
T ss_pred HHHHHHHHHHHHHHhcCcc-ccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence 9999999988766543321 111 124556889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+.+++.++ +|+|++|++++ +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++. +++|+++|+|||||+||++|
T Consensus 184 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~d 263 (476)
T cd07091 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDD 263 (476)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCC
Confidence 99999999998 99999999998 556788899886 9999999999999999999987 88999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.|++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 264 ADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~ 342 (476)
T cd07091 264 ADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIES 342 (476)
T ss_pred CCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999995 58899999999999999999999
Q ss_pred hh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. .|+++++||..+ ..++|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+++
T Consensus 343 a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~ 422 (476)
T cd07091 343 GKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKA 422 (476)
T ss_pred HHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 85 577999999864 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+++.... .| +..+.||+|++
T Consensus 423 ~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~ 459 (476)
T cd07091 423 LRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRE 459 (476)
T ss_pred HHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCcc
Confidence 9999999999999998654331 22 45688888877
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-82 Score=643.37 Aligned_cols=423 Identities=22% Similarity=0.333 Sum_probs=390.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 119 (524)
T PRK09407 41 TGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVA 119 (524)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++++++.++.++++........ .....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 120 ~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~ 198 (524)
T PRK09407 120 LTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTAL 198 (524)
T ss_pred HHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHH
Confidence 999999999888776543222111 1246788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++| +.+.+..|+.| +|.|.||||+++|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 199 ~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~ 277 (524)
T PRK09407 199 AAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLD 277 (524)
T ss_pred HHHHHHHHcCCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHH
Confidence 999999998 99999999999 45678888876 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +
T Consensus 278 ~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~ 356 (524)
T PRK09407 278 KAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAK 356 (524)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999995 5789999999999999999999985 6
Q ss_pred CCeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
|+++++||... .+|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 357 Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~ 436 (524)
T PRK09407 357 GATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAI 436 (524)
T ss_pred CCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 78999998753 2478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh----hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV----IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~----~~~-~~~~~~~~~~~~ 430 (434)
++++++|.|+||+...+. ..| +..+.||+||++
T Consensus 437 ~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~ 474 (524)
T PRK09407 437 AARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRH 474 (524)
T ss_pred HHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccc
Confidence 999999999999866421 123 677999999984
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-82 Score=639.86 Aligned_cols=421 Identities=22% Similarity=0.352 Sum_probs=387.1
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..+++++++.|++|++.|++++.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..+++
T Consensus 25 ~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i~ 103 (478)
T cd07131 25 EEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAID 103 (478)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++...+...+.. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 104 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 180 (478)
T cd07131 104 MAQYAAGEGRRLFGET-VPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180 (478)
T ss_pred HHHHHHHHHHHhCCcc-cccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHH
Confidence 9999988877643322 1111 112356899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
+.+++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 181 l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~ 260 (478)
T cd07131 181 LVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADLD 260 (478)
T ss_pred HHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHH
Confidence 99999999 999999999984 45788899887 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++.+++++.++++++. .
T Consensus 261 ~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 339 (478)
T cd07131 261 LALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEE 339 (478)
T ss_pred HHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999999999999999999999999999964 789999999999999999999995 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... ..|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 340 Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a 419 (478)
T cd07131 340 GATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKA 419 (478)
T ss_pred CCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHH
Confidence 78999998752 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCC-Ccc
Q 013901 395 QQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLL-RSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~-~~~ 430 (434)
+++++++++|+|+||+++.+. ..| +..+.||+| +++
T Consensus 420 ~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~ 459 (478)
T cd07131 420 FRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREA 459 (478)
T ss_pred HHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCC
Confidence 999999999999999977653 222 556888888 663
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-82 Score=640.54 Aligned_cols=420 Identities=24% Similarity=0.338 Sum_probs=386.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..+++++++.|++||+ .|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 22 tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~ 100 (482)
T cd07119 22 NGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDD 100 (482)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence 5778999999999999999999999997 59999999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++++.++..+... .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~ 176 (482)
T cd07119 101 VANCFRYYAGLATKETGEVY-DV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLT 176 (482)
T ss_pred HHHHHHHHHHHHHHhcCccc-cC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHH
Confidence 99999999988876433221 11 124457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+.++++++.++ +|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++||
T Consensus 177 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dA 256 (482)
T cd07119 177 TIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADA 256 (482)
T ss_pred HHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECCCC
Confidence 99999999998 999999999985 45788899986 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++
T Consensus 257 Dl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a 335 (482)
T cd07119 257 DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLG 335 (482)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 478999999999999999999998
Q ss_pred h-hCCeeeecCccCC-----CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 318 K-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~-----~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
. .|+++++||.... .|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||++||||+|.
T Consensus 336 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 415 (482)
T cd07119 336 KEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDI 415 (482)
T ss_pred HHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 5 6779999997532 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+.++++++++++|+|+||++.... ..| +..+.||+|++
T Consensus 416 ~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~ 455 (482)
T cd07119 416 ARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRE 455 (482)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCcc
Confidence 999999999999999999864332 112 44588888887
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=636.02 Aligned_cols=420 Identities=25% Similarity=0.355 Sum_probs=385.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc-hhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE-LESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~~ei~~~ 82 (434)
+++.+++++..+..|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+
T Consensus 6 t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~ 84 (457)
T cd07108 6 TGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVL 84 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999997 5776 699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++.+....+... ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~ 160 (457)
T cd07108 85 ADLFRYFGGLAGELKGE-TLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAV 160 (457)
T ss_pred HHHHHHHHHHHHHhCCc-eecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence 99999888776554322 1111 1234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+.+++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++|||+
T Consensus 161 ~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAdl 240 (457)
T cd07108 161 LLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADL 240 (457)
T ss_pred HHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence 999999999999999999998 456778899887 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 241 KVACRRMIMG-KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 241 ~~aa~~i~~~-~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.++++ +| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++.
T Consensus 241 ~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (457)
T cd07108 241 DDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGL 319 (457)
T ss_pred HHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999 59 9999999999999999999999999999999999999996 4789999999999999999999984
Q ss_pred --hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 319 --VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 319 --~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
+|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.
T Consensus 320 ~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~ 399 (457)
T cd07108 320 STSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDL 399 (457)
T ss_pred hCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCH
Confidence 588999999763 3589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++++++++|.|+||++..+.. .| +..+.||+||+
T Consensus 400 ~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~ 439 (457)
T cd07108 400 GRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGRE 439 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCC
Confidence 9999999999999999999765431 22 56688888886
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=637.95 Aligned_cols=420 Identities=21% Similarity=0.306 Sum_probs=384.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..+++.++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 100 (484)
T TIGR03240 22 TQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMI 100 (484)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++.....+.+.... . ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 101 ~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~ 176 (484)
T TIGR03240 101 GKVAISIKAYHERTGESEN--P--MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176 (484)
T ss_pred HHHHHHHHHHHHhcCcccc--C--CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHH
Confidence 9999888877765432211 1 12345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc-cCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~-~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+++|+.+.+.++++ .+++++|+|||||+||++|||+
T Consensus 177 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl 256 (484)
T TIGR03240 177 ETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADI 256 (484)
T ss_pred HHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCH
Confidence 999999999 99999999999777888999996 99999999999999999987765 6889999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcH-HHHHHHHHHHHhcccCCCC-C-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNP-L-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p-~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
+.|++.+++++| .|+||.|+++++||||++++ ++|+++|++++.++++|+| + +++++||++++.+++++.++++++
T Consensus 257 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a 335 (484)
T TIGR03240 257 DAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKL 335 (484)
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999985 9999999999999999997 3 467999999999999999999998
Q ss_pred h-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. .|+++++||.. +.+++|++|||+ +++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 336 ~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~ 414 (484)
T TIGR03240 336 LALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414 (484)
T ss_pred HHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 5 57899998764 345789999999 68999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh---hhhhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHVI---MLALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~---~~~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+...+.. .-+..+.||+||+.
T Consensus 415 ~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~ 452 (484)
T TIGR03240 415 RFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPS 452 (484)
T ss_pred HHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCC
Confidence 999999999999998776542 22666888999884
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-82 Score=629.50 Aligned_cols=406 Identities=22% Similarity=0.323 Sum_probs=374.7
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~ 97 (434)
+++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++.+..+.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999997 699999999999998888776
Q ss_pred cccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCC
Q 013901 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176 (434)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g 176 (434)
.+.... ..+..++++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g 155 (431)
T cd07095 80 GERATP----MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG 155 (431)
T ss_pred CCcccC----CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence 544321 12456789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc-cCceEEecCCCCceEEcCCCCHHHHHHHHHHHhccc
Q 013901 177 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 254 (434)
Q Consensus 177 ~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~-~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~ 254 (434)
++++++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.++.+ .+++++|+|||||+||++|||++.|++.+++++| +
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~ 234 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-L 234 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-H
Confidence 9999998777788899997 99999999999999999987654 6999999999999999999999999999999999 9
Q ss_pred CCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCcc-C
Q 013901 255 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGER-D 330 (434)
Q Consensus 255 ~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~-~ 330 (434)
|+||.|+++++||||++ ++++|+++|++++.++++|+|.+ ++.+||++++.+++++.++++++. .|+++++||.. +
T Consensus 235 ~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~ 314 (431)
T cd07095 235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV 314 (431)
T ss_pred hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence 99999999999999999 99999999999999999999965 689999999999999999999995 68899999865 3
Q ss_pred CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECC
Q 013901 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410 (434)
Q Consensus 331 ~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~ 410 (434)
.+|+|++|||+ +++++|.+++||+||||++|++|+|++||++++|++++||+++|||+|.++++++++++++|+|+||+
T Consensus 315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~ 393 (431)
T cd07095 315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR 393 (431)
T ss_pred CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence 46899999999 68999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Cchhhh---hhhhhhhcCCCCcc
Q 013901 411 TAVHVI---MLALLKNHTLLRSC 430 (434)
Q Consensus 411 ~~~~~~---~~~~~~~~~~~~~~ 430 (434)
++.... .-+..+.||+||++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G~~~ 416 (431)
T cd07095 394 PTTGASSTAPFGGVGLSGNHRPS 416 (431)
T ss_pred CCCCCCCCCCCCCcccccCCCCC
Confidence 665332 12566888888874
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=635.13 Aligned_cols=422 Identities=24% Similarity=0.349 Sum_probs=389.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..+++++++.|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 11 t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~ 90 (462)
T cd07112 11 TGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPS 90 (462)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 6788999999999999999999999998 49999999999999999999999999999999999999999986569999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++..++++++.++.+.+... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~ 166 (462)
T cd07112 91 AANTFRWYAEAIDKVYGEVA-PT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLT 166 (462)
T ss_pred HHHHHHHHHHHHHHhcCcee-cC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHH
Confidence 99999999999887654321 11 123457789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~d 237 (434)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++ .++||+++|+||+||+||++|
T Consensus 167 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~d 246 (462)
T cd07112 167 ALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFAD 246 (462)
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCC
Confidence 99999999998 99999999998 556788899886 999999999999999999888 489999999999999999999
Q ss_pred C-CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 013901 238 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 238 a-d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+ |++.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++++++++.++|+
T Consensus 247 a~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~ 325 (462)
T cd07112 247 APDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIE 325 (462)
T ss_pred CcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9 99999999999999 99999999999999999999999999999999999999965 789999999999999999999
Q ss_pred Hhh-hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 316 DDK-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
++. .|+++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.
T Consensus 326 ~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 405 (462)
T cd07112 326 SGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDL 405 (462)
T ss_pred HHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCH
Confidence 985 6789999987642 588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+.++++++++++|+|+||+..... ..| +..+.||+||++
T Consensus 406 ~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~ 446 (462)
T cd07112 406 SRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDK 446 (462)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999999865433 223 566889999873
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-81 Score=634.61 Aligned_cols=412 Identities=25% Similarity=0.360 Sum_probs=382.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 46 t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 125 (480)
T cd07111 46 TGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVA 125 (480)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999756899888
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++....+... .....++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 126 ~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~ 191 (480)
T cd07111 126 RHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191 (480)
T ss_pred HHHHHHHHHHHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 88887766554321 1134579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++
T Consensus 192 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~ 271 (480)
T cd07111 192 LFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLD 271 (480)
T ss_pred HHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHH
Confidence 999999998 99999999998667788899997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++. +
T Consensus 272 ~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 350 (480)
T cd07111 272 SAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAE 350 (480)
T ss_pred HHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999996 4789999999999999999999985 6
Q ss_pred CCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+++++
T Consensus 351 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~ 430 (480)
T cd07111 351 GADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA 430 (480)
T ss_pred CCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 7789988864 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||++..+.. .| +..|+||+||++
T Consensus 431 ~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 464 (480)
T cd07111 431 LSLKAGVVWINGHNLFDAAAGFGGYRESGFGREG 464 (480)
T ss_pred HhCCEeeEEECCCCCCCCCCCcCCcccccCCccc
Confidence 999999999998765442 23 677999999983
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-81 Score=634.14 Aligned_cols=421 Identities=24% Similarity=0.368 Sum_probs=385.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 86 (452)
T cd07147 8 TGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAI 86 (452)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccc-ccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKA-KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
..++++++.+..+.+.... .......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~ 166 (452)
T cd07147 87 DTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSA 166 (452)
T ss_pred HHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence 9999999888766433211 110011234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+++++.++ +|+|+||+++++.+.+..|+.|+ +|.|.||||+.+|+.+.+.++. +|+++|+|||||+||++|||+
T Consensus 167 ~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~dadl 244 (452)
T cd07147 167 LILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDSDADL 244 (452)
T ss_pred HHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECCCCCH
Confidence 9999999998 99999999998777788899886 9999999999999999998764 799999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++.
T Consensus 245 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 323 (452)
T cd07147 245 DFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVD 323 (452)
T ss_pred HHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 4789999999999999999999985
Q ss_pred hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 319 ~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
.|+++++||.. +|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|++++||++||||+|.+++++++
T Consensus 324 ~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~ 401 (452)
T cd07147 324 AGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAW 401 (452)
T ss_pred CCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 67899999876 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||+++.+. ..| +..+.||+||++
T Consensus 402 ~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~ 436 (452)
T cd07147 402 DELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREG 436 (452)
T ss_pred HHcCcceEEECCCCCCCCCCCCcCCccccccCCCC
Confidence 99999999999876442 122 667889999874
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-81 Score=629.57 Aligned_cols=405 Identities=47% Similarity=0.802 Sum_probs=373.7
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.++.+....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999876799999999999999998876544
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
.............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v 161 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV 161 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence 32221111234678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C 260 (434)
++++.+.+..|+++.+|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|
T Consensus 162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C 240 (443)
T cd07132 162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTC 240 (443)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCce
Confidence 999766677788767999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEE
Q 013901 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (434)
Q Consensus 261 ~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv 340 (434)
+++++||||++++++|+++|+++++++++|+|++++++||++++++++++.+++++ +++++||..+.+++|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptv 316 (443)
T cd07132 241 IAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTV 316 (443)
T ss_pred eCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEE
Confidence 99999999999999999999999999999999878999999999999999999874 48999998766789999999
Q ss_pred EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhh---h
Q 013901 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI---M 417 (434)
Q Consensus 341 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~---~ 417 (434)
+.+++++|+++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||+...+.. .
T Consensus 317 l~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~ 396 (443)
T cd07132 317 LTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSL 396 (443)
T ss_pred EeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998775542 2
Q ss_pred h-hhhhhcCCCCcc
Q 013901 418 L-ALLKNHTLLRSC 430 (434)
Q Consensus 418 ~-~~~~~~~~~~~~ 430 (434)
| +..++||+||++
T Consensus 397 PfGG~k~SG~G~~~ 410 (443)
T cd07132 397 PFGGVGNSGMGAYH 410 (443)
T ss_pred CCCCCCcccCCCcc
Confidence 3 667999999884
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-81 Score=632.81 Aligned_cols=420 Identities=26% Similarity=0.400 Sum_probs=386.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..++
T Consensus 8 t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 86 (453)
T cd07094 8 DGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAI 86 (453)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcccccc-ccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKA-KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.++++.+.... .......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 87 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~ 166 (453)
T cd07094 87 DTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSA 166 (453)
T ss_pred HHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence 9999999988877543211 111001234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++++++|+ .+.+..|++|+ +|.|.||||..+++.+.+.+ .++|+++|+|||||+||++|||
T Consensus 167 ~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~~dad 244 (453)
T cd07094 167 LELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVDRDAD 244 (453)
T ss_pred HHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEECCCCC
Confidence 9999999998 999999999984 45688999997 99999999999999999987 5799999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.
T Consensus 245 l~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 323 (453)
T cd07094 245 LDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAV 323 (453)
T ss_pred HHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999964 789999999999999999999985
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
.|+++++||.. .++|++|||+.+++++|+++++|+||||++|++|+|++||++++|++++||++||||+|.++++++
T Consensus 324 ~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~ 401 (453)
T cd07094 324 EAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKA 401 (453)
T ss_pred HCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHH
Confidence 67799999865 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRS 429 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~ 429 (434)
++++++|+|+||++..+. ..| +..++||+||+
T Consensus 402 ~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~ 436 (453)
T cd07094 402 AEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGRE 436 (453)
T ss_pred HHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcC
Confidence 999999999999976442 122 66789999987
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-81 Score=632.04 Aligned_cols=423 Identities=23% Similarity=0.333 Sum_probs=387.6
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||..++...|+..+
T Consensus 5 ~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~ 84 (450)
T cd07092 5 ATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGA 84 (450)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999987755699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+..+++++...+.+.+... ... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 85 i~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 161 (450)
T cd07092 85 VDNFRFFAGAARTLEGPAA-GEY--LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTT 161 (450)
T ss_pred HHHHHHHHHHHHHhcCccc-Ccc--CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 9999999887765433221 111 1133567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~alp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+.+++.+.+|+|++|+++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 162 ~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl 241 (450)
T cd07092 162 LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADL 241 (450)
T ss_pred HHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCH
Confidence 9999999999999999999984 45788899987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhhh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKV 319 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (434)
+.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.+
T Consensus 242 ~~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ 320 (450)
T cd07092 242 DAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPA 320 (450)
T ss_pred HHHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHc
Confidence 999999999999 9999999999999999999999999999999999999996 47899999999999999999998887
Q ss_pred CCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||... ..|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.+++++
T Consensus 321 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~ 400 (450)
T cd07092 321 HARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLS 400 (450)
T ss_pred CCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 88999999764 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 399 ETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
+++++|.|+||+...+.. .| +..+.||+|++
T Consensus 401 ~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~ 433 (450)
T cd07092 401 ARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKD 433 (450)
T ss_pred HhcCccEEEECCCCCCCCCCCcCCcccCcCCCC
Confidence 999999999998665431 22 45677788876
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-81 Score=639.06 Aligned_cols=417 Identities=20% Similarity=0.287 Sum_probs=387.6
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..|++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++
T Consensus 57 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~ 135 (518)
T cd07125 57 ERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAID 135 (518)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++++++.++++++....+. ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 136 ~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 212 (518)
T cd07125 136 FCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR 212 (518)
T ss_pred HHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHH
Confidence 99999999988765442222 134567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCC
Q 013901 165 LAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~da 238 (434)
+++++.++ +|+|++|+++++. +.+..|+.|+ +|.|.||||+.+++.+.+.++++ ++|+++|+|||||+||++||
T Consensus 213 l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dA 292 (518)
T cd07125 213 AVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTA 292 (518)
T ss_pred HHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCC
Confidence 99999998 9999999999854 4788899886 99999999999999999988855 79999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++.+++++.++++++
T Consensus 293 Dl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 371 (518)
T cd07125 293 LPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELM 371 (518)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999964 78999999999999999999999
Q ss_pred hhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 318 KVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 318 ~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
..++++++||..+. .|+|++|||+.++ +|.+++||+||||++|++|+ |++|||+++|++++||+++|||+|.+.+
T Consensus 372 ~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~ 449 (518)
T cd07125 372 RGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREI 449 (518)
T ss_pred HhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHH
Confidence 77789999987644 6899999999887 89999999999999999999 9999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhh---hh-hhhhhcCCCC
Q 013901 395 QQFVETVSAGGLVINDTAVHVI---ML-ALLKNHTLLR 428 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~---~~-~~~~~~~~~~ 428 (434)
++|++++++|+|+||+++++.. .| +..+.||+|+
T Consensus 450 ~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~ 487 (518)
T cd07125 450 EYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP 487 (518)
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc
Confidence 9999999999999999876542 22 6678889985
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-81 Score=625.26 Aligned_cols=406 Identities=34% Similarity=0.616 Sum_probs=371.8
Q ss_pred HHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC-chhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 22 FVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 22 a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
.+++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++++++.+..+.++.
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 567755799999999999999988776654
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
.........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~~ 162 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVAV 162 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence 32211111244578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C 260 (434)
++|+.+.+..|+++++|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.|
T Consensus 163 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C 241 (434)
T cd07133 163 VTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQTC 241 (434)
T ss_pred EeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCcc
Confidence 999777788888777999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccC---CCCccc
Q 013901 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD---KNKLRI 336 (434)
Q Consensus 261 ~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~---~~~~~~ 336 (434)
+++++||||++++++|+++|++++.++++|+ .+++++||++++.+++++.++++++. +|+++++||... .+|+|+
T Consensus 242 ~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~ 320 (434)
T cd07133 242 VAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKL 320 (434)
T ss_pred cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEE
Confidence 9999999999999999999999999998886 56789999999999999999999985 678999998763 358999
Q ss_pred ccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhh
Q 013901 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416 (434)
Q Consensus 337 ~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~ 416 (434)
+|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++++++++|.|+||+.+++..
T Consensus 321 ~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~ 400 (434)
T cd07133 321 PPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVA 400 (434)
T ss_pred eeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998765443
Q ss_pred h---h-hhhhhcCCCCc
Q 013901 417 M---L-ALLKNHTLLRS 429 (434)
Q Consensus 417 ~---~-~~~~~~~~~~~ 429 (434)
. | +..+.||+||+
T Consensus 401 ~~~~PfGG~k~SG~G~~ 417 (434)
T cd07133 401 QDDLPFGGVGASGMGAY 417 (434)
T ss_pred CCCCCcCCCCcccCCCc
Confidence 2 2 56688899987
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=641.51 Aligned_cols=420 Identities=30% Similarity=0.478 Sum_probs=386.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..+++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~ 94 (462)
T PF00171_consen 16 TGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAI 94 (462)
T ss_dssp TECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHH
T ss_pred CcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhh
Confidence 6788999999999999999999999999999999999999999999999999999999999999999999985 999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.. +..+. ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~ 170 (462)
T PF00171_consen 95 DFLRYYADAARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTAL 170 (462)
T ss_dssp HHHHHHHHHHHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHH
T ss_pred hhhhhhhhcccceeh-hhccc---ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccc
Confidence 999999999988544 33222 14677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++++.+.+.++++++|+++|+|||||+||++|||+
T Consensus 171 ~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDl 250 (462)
T PF00171_consen 171 LLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADL 250 (462)
T ss_dssp HHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHH
T ss_pred cchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEeccccc
Confidence 999999998 99999999999 677889999986 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
|.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++.+++.++++++.
T Consensus 251 d~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 329 (462)
T PF00171_consen 251 DKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVA 329 (462)
T ss_dssp HHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccc
Confidence 999999999999 9999999999999999999999999999999999999996 4889999999999999999999995
Q ss_pred hCCeeeecC----ccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 VSGKIVHGG----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 ~~~~v~~gg----~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++|| .....|+|++|||+.+++++|+++++|+||||++|++|+|++|+++++|++++||+++|||+|.+++
T Consensus 330 ~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~ 409 (462)
T PF00171_consen 330 EGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRA 409 (462)
T ss_dssp TTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccc
Confidence 688999999 2345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh---hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML---ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~---~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+++++.... +..+.||+|++
T Consensus 410 ~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~ 447 (462)
T PF00171_consen 410 ERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGRE 447 (462)
T ss_dssp HHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEB
T ss_pred ccccccccccceeecCCcccccccCCCCCcccccCCcc
Confidence 999999999999999987776443 33455555554
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-81 Score=633.31 Aligned_cols=420 Identities=22% Similarity=0.298 Sum_probs=382.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 40 t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~ 118 (496)
T PLN00412 40 TRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSG 118 (496)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHHHHhhccccc-ccc-cccc--CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCCh
Q 013901 84 TSIKSALKELKHWMTPEK-AKT-SITT--FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~ 159 (434)
..++++++++..+..+.. ... .... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 119 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~ 198 (496)
T PLN00412 119 DLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198 (496)
T ss_pred HHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999988777654321 111 0011 122356889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 160 ASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 160 ~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
.++..+++++.++ +|+|++|+++++ .+.+..|..|+ +|.|.|||| .+|+.+.+.++ ++|+++|+|||||+||++
T Consensus 199 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~ 275 (496)
T PLN00412 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLE 275 (496)
T ss_pred HHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcC
Confidence 9999999999998 999999999984 56788888887 999999999 99999998875 799999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
|||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.+++++
T Consensus 276 dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~ 354 (496)
T PLN00412 276 DADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMD 354 (496)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999778899999999999999999999
Q ss_pred hh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 317 DK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 317 a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+. .|+++++||.. .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.++++
T Consensus 355 a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~ 432 (496)
T PLN00412 355 AKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 432 (496)
T ss_pred HHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 85 57788887754 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||++.... ..| +..+.||+|++.
T Consensus 433 ~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~ 470 (496)
T PLN00412 433 LISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQG 470 (496)
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCC
Confidence 99999999999999876422 233 467889999873
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=630.78 Aligned_cols=419 Identities=20% Similarity=0.276 Sum_probs=385.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 25 t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i 103 (477)
T TIGR01722 25 TNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGL 103 (477)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+...+... ... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 104 ~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~ 180 (477)
T TIGR01722 104 EVVEHACGVNSLLKGETS-TQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV 180 (477)
T ss_pred HHHHHHHHHHHHhcCccc-ccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHH
Confidence 999998877665443221 110 12334678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+.+++.++ +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+++.+.+.++.++||+++|+||+||+||++|||++
T Consensus 181 ~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~ 260 (477)
T TIGR01722 181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKD 260 (477)
T ss_pred HHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCCCHH
Confidence 999999998 99999999998777788899987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||+++ ++|+++|+++++++++|+|. +++++||++++++++++.++++++. +
T Consensus 261 ~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~ 338 (477)
T TIGR01722 261 AAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAE 338 (477)
T ss_pred HHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999998 99999999999999999996 5789999999999999999999985 6
Q ss_pred CCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 320 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 320 ~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
|+++++||... .+|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 339 Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~ 418 (477)
T TIGR01722 339 GAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAA 418 (477)
T ss_pred CCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 78999998752 2588999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--h-hhhhhhhcCCCC
Q 013901 395 QQFVETVSAGGLVINDTAVHV--I-MLALLKNHTLLR 428 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~-~~~~~~~~~~~~ 428 (434)
++|++++++|.|+||+...+. . .-+..|.||+|+
T Consensus 419 ~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~ 455 (477)
T TIGR01722 419 RRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGD 455 (477)
T ss_pred HHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCC
Confidence 999999999999999854432 1 226678999994
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-81 Score=622.72 Aligned_cols=409 Identities=41% Similarity=0.675 Sum_probs=376.4
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
+++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++..|+..+++.+++++..++.+....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57889999999999999999999999999999999999999999999999999876799999999999998877665543
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
....+....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~ 161 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV 161 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence 22222112345678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C 260 (434)
++++.+.+..|++|++|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C 240 (433)
T cd07134 162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTC 240 (433)
T ss_pred EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcc
Confidence 999778888899888999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC--CCCCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccCCCCcccc
Q 013901 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIA 337 (434)
Q Consensus 261 ~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p--~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~~~~~~~ 337 (434)
+++++||||++++|+|+++|+++++++..++| ++++++||++++.+++++.++++++. +|+++++||..+..++|++
T Consensus 241 ~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~ 320 (433)
T cd07134 241 IAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIA 320 (433)
T ss_pred cCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEe
Confidence 99999999999999999999999999988885 45789999999999999999999984 6889999998766689999
Q ss_pred cEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhhh
Q 013901 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417 (434)
Q Consensus 338 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 417 (434)
|||+.+++++|++++||+||||++|++|+|++|+|+++|++++||+++|||+|.+.++++++++++|.|+||+.+++...
T Consensus 321 Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~ 400 (433)
T cd07134 321 PTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLN 400 (433)
T ss_pred eEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987654322
Q ss_pred ---h-hhhhhcCCCCcc
Q 013901 418 ---L-ALLKNHTLLRSC 430 (434)
Q Consensus 418 ---~-~~~~~~~~~~~~ 430 (434)
| +..|.||+|++.
T Consensus 401 ~~~PfGG~k~SG~G~~~ 417 (433)
T cd07134 401 PNLPFGGVNNSGIGSYH 417 (433)
T ss_pred CCCCCCCcCcccCCCcC
Confidence 2 566888898874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-81 Score=629.03 Aligned_cols=422 Identities=25% Similarity=0.369 Sum_probs=385.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..+++.+++.|++|++ .|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~ 84 (457)
T cd07114 6 TGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-AQVRY 84 (457)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHH
Confidence 6788999999999999999999999997 49999999999999999999999999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++..+++++...+...... .. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 85 ~~~~~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~ 161 (457)
T cd07114 85 LAEWYRYYAGLADKIEGAV-IP--VDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPAS 161 (457)
T ss_pred HHHHHHHHHHHHHHhcCcc-cc--cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHH
Confidence 9999999887766542211 11 11123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..++++|.++ +|+|+||++++ +.+.+..|+.|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++||
T Consensus 162 ~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 241 (457)
T cd07114 162 TLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDA 241 (457)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCCC
Confidence 99999999999 99999999998 456778899886 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.|++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 242 dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 242 DLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 488999999999999999999988
Q ss_pred h-hCCeeeecCccCC-----CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 318 K-VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~-----~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
. +|+++++||.... .|+|++|||+.++++++.++++|+||||++|++|+|++||++++|++++||+++|||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 5 5779999997632 479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
+.++++++++++|+|+||+...... .| +..+.||+|+++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~ 441 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGREN 441 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccc
Confidence 9999999999999999998654331 22 456888888873
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=627.63 Aligned_cols=416 Identities=21% Similarity=0.278 Sum_probs=379.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|++++++.|++|+ +.++..+|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus 26 t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 101 (472)
T TIGR03250 26 NGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVA 101 (472)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999886 468999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccc-cccCCCcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+.+++++..+....+....... ....+...+++++|+ |||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 102 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 181 (472)
T TIGR03250 102 DVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS 181 (472)
T ss_pred HHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHH
Confidence 9999999888765432211000 011123567899998 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+.+++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.++ ++|+++|+|||||+||++||
T Consensus 182 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~dA 259 (472)
T TIGR03250 182 ALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVMEDA 259 (472)
T ss_pred HHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEECCCC
Confidence 99999999998 99999999998 467789999987 999999999999999998875 68999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 260 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 338 (472)
T TIGR03250 260 DLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEA 338 (472)
T ss_pred CHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 478999999999999999999999
Q ss_pred h-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 318 K-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
. +|+++++||.. .|+|++|||+++++++|++++||+||||++|++|+|++||++++|++++||++||||+|.+++++
T Consensus 339 ~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~ 416 (472)
T TIGR03250 339 IAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITR 416 (472)
T ss_pred HHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHH
Confidence 5 67899999875 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhhh--hh-hhhhhcCCCC
Q 013901 397 FVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLR 428 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~ 428 (434)
+++++++|+|+||+.+.+.. .| +..|.||+|+
T Consensus 417 ~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~ 451 (472)
T TIGR03250 417 FIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY 451 (472)
T ss_pred HHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC
Confidence 99999999999998764431 23 6779999994
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=628.19 Aligned_cols=421 Identities=16% Similarity=0.205 Sum_probs=373.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A-~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+ +|+++|+++|++| |+.|+.+|.++|.++|+++++.|++++++|+++ +.|+|||+.+++ .|+..+
T Consensus 24 tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~ 100 (513)
T cd07128 24 TGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSW-IDIDGG 100 (513)
T ss_pred CCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHH
Confidence 678899999865 7999999999998 799999999999999999999999999999995 899999999997 699999
Q ss_pred HHHHHHHHHHHHhhccccccc--c---ccccCC-CcceEeeec-ceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKHWMTPEKAK--T---SITTFP-SSAEIVPEP-FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps 155 (434)
++.++++++..+++....... . +....+ ...+++++| +|||++|+|||||+...++++++||++||+||+|||
T Consensus 101 ~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs 180 (513)
T cd07128 101 IGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPA 180 (513)
T ss_pred HHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999999888765321110 0 000011 135678999 599999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhh--cCCCcEEEEeCCh-HhHHHHhcCCCCeEEEeCChHHHHHHHHHH--hcccCceEEecCCCC
Q 013901 156 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAV-AETSALLDQKWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGKS 230 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~-~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~--~~~~~p~~~e~gG~~ 230 (434)
+.+|+++..+.+++.++ +|+|++|+++|+. +.+..| ..+|.|.||||+++|+.+.+.+ +++++|+++|+||||
T Consensus 181 ~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l--~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGkn 258 (513)
T cd07128 181 TATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL--GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLN 258 (513)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc--CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcC
Confidence 99999999999999997 7999999999853 323222 1489999999999999999985 478999999999999
Q ss_pred ceEEcCCCC-----HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCH
Q 013901 231 PVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNS 304 (434)
Q Consensus 231 ~~iv~~dad-----~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~ 304 (434)
|+||++||| +|.+++.+++++| .|+||.|++++|+|||++++++|+++|+++++++++|+|. +++++||++++
T Consensus 259 p~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~ 337 (513)
T cd07128 259 AAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSR 337 (513)
T ss_pred cEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCH
Confidence 999999999 9999999999999 9999999999999999999999999999999999999995 57899999999
Q ss_pred HHHHHHHHHHHHhhhCCeeeecCccC--------CCCcccccEEEEeCCCC--CCccccccccceeeEeecCCHHHHHHH
Q 013901 305 NHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVDKIEDSFDI 374 (434)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~v~~gg~~~--------~~~~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~~~~eai~~ 374 (434)
.+++++.++|+++..++++++||... ..|+|++|||+.+++++ |.+++||+||||++|++|+|++|++++
T Consensus 338 ~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 417 (513)
T cd07128 338 EQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIEL 417 (513)
T ss_pred HHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999997669999999652 25899999999988874 889999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEECCCch------h-----hhhhhhhhhcCCCCcc
Q 013901 375 INSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV------H-----VIMLALLKNHTLLRSC 430 (434)
Q Consensus 375 ~n~~~~gl~~~i~t~d~~~~~~~~~~~~--~g~v~iN~~~~------~-----~~~~~~~~~~~~~~~~ 430 (434)
+|+++|||++||||+|.+++++++++++ +|+|+||+.++ + ...-+..|.||+||+.
T Consensus 418 aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~ 486 (513)
T cd07128 418 AARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEEL 486 (513)
T ss_pred HhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCccc
Confidence 9999999999999999999999999997 99999998642 1 1223667899999983
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-80 Score=625.19 Aligned_cols=422 Identities=24% Similarity=0.372 Sum_probs=389.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..|+..++
T Consensus 6 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i 85 (455)
T cd07093 6 TGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAA 85 (455)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999988767999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++....... ..... ..+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~ 161 (455)
T cd07093 86 ANFRFFADYILQLDG-ESYPQ---DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAW 161 (455)
T ss_pred HHHHHHHHhHHHhCC-ccccC---CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHH
Confidence 999999888766322 11111 12456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.+++.++ +|+|+|+++++ +.+.+..|+.|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++|||+
T Consensus 162 ~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl 241 (455)
T cd07093 162 LLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADADL 241 (455)
T ss_pred HHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCCCH
Confidence 999999999 99999999998 567788899887 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.
T Consensus 242 ~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (455)
T cd07093 242 DRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARA 320 (455)
T ss_pred HHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999964 789999999999999999999885
Q ss_pred hCCeeeecCccCC-----CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~~~-----~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
.|+++++||..+. .++|+.|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.
T Consensus 321 ~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~ 400 (455)
T cd07093 321 EGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGR 400 (455)
T ss_pred CCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 6789999997642 48899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++++++|+|+||+...+.. .| +..+.||+|+++
T Consensus 401 ~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~ 439 (455)
T cd07093 401 AHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREG 439 (455)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCc
Confidence 99999999999999999776542 12 456888888863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-80 Score=624.83 Aligned_cols=421 Identities=27% Similarity=0.395 Sum_probs=387.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..+++++++.|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..++
T Consensus 6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~ 84 (451)
T cd07103 6 TGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAA 84 (451)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++....+...+... +. ...+..++.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 85 ~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~ 161 (451)
T cd07103 85 SFLEWFAEEARRIYGRTI-PS--PAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSAL 161 (451)
T ss_pred HHHHHHHHHHHHhcCccc-cc--CCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence 999999888776544221 11 113456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+.++|.++ +|+|++++++++ .+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 162 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl 241 (451)
T cd07103 162 ALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADL 241 (451)
T ss_pred HHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence 999999998 999999999984 56678899886 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.|++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++.+++.++++++.
T Consensus 242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 242 DKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5789999999999999999999985
Q ss_pred hCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||..+. +|+|+.|||+.++++++.++++|+||||++|++|+|++||++++|++++||+++|||+|.+.++++
T Consensus 321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 400 (451)
T cd07103 321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV 400 (451)
T ss_pred CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 6789999987653 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++|.|+||+++.+.. .| +..+.||+|++
T Consensus 401 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~ 434 (451)
T cd07103 401 AEALEAGMVGINTGLISDAEAPFGGVKESGLGRE 434 (451)
T ss_pred HHhCCcceEEECCCCCCCCCCCcCCCccCcCCcc
Confidence 9999999999999875431 12 45577888876
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-80 Score=615.62 Aligned_cols=405 Identities=49% Similarity=0.825 Sum_probs=372.3
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccc
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~ 100 (434)
++++.|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.++.+....
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 47899999999999999999999999999999999999999999999999887766799999999999998887765543
Q ss_pred ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
.........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v 161 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV 161 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence 22211111234678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 013901 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260 (434)
Q Consensus 181 i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C 260 (434)
++|+.+.+..|+.|++|.|.||||+.+++.|.+.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C 240 (426)
T cd07087 162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTC 240 (426)
T ss_pred EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCcc
Confidence 998777788899888999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEE
Q 013901 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL 340 (434)
Q Consensus 261 ~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv 340 (434)
+++++||||++++++|+++|+++++++++++|++.+++||++++.+.+++.++++++ ++++||..+.+|+|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptv 316 (426)
T cd07087 241 IAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTI 316 (426)
T ss_pred ccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEE
Confidence 999999999999999999999999999988888889999999999999999999865 8999997765689999999
Q ss_pred EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhh---h
Q 013901 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI---M 417 (434)
Q Consensus 341 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~---~ 417 (434)
+.+++++|+++++|+||||++|++|+|++||++++|++++||+++|||+|.++++++++++++|+|+||+.+.+.. .
T Consensus 317 l~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~ 396 (426)
T cd07087 317 LDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNL 396 (426)
T ss_pred EecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998764332 2
Q ss_pred h-hhhhhcCCCCcc
Q 013901 418 L-ALLKNHTLLRSC 430 (434)
Q Consensus 418 ~-~~~~~~~~~~~~ 430 (434)
| +..|.||+||++
T Consensus 397 PfGG~k~SG~G~~~ 410 (426)
T cd07087 397 PFGGVGNSGMGAYH 410 (426)
T ss_pred CCCCCCcccCCCcc
Confidence 2 666899999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-80 Score=617.64 Aligned_cols=404 Identities=29% Similarity=0.441 Sum_probs=371.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~ 97 (434)
|++++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++..+.+.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999988876 699999999999998887652
Q ss_pred cccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCC
Q 013901 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176 (434)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g 176 (434)
... .+. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus 80 ~~~-~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g 156 (432)
T cd07105 80 GGS-IPS--DKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG 156 (432)
T ss_pred Cee-ccc--CCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence 221 111 112345688999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cEEEEeCC----hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHh
Q 013901 177 SIRVVEGA----VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251 (434)
Q Consensus 177 ~v~~i~~~----~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~ 251 (434)
++|+++++ .+.+..|++|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||++.|++.+++++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999974 24678899997 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccC
Q 013901 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERD 330 (434)
Q Consensus 252 ~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~ 330 (434)
| +|+||.|+++++||||++++++|+++|++++.++++| ++++||++++.+++++.++++++. .|+++++||..+
T Consensus 237 ~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 F-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred H-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 9 9999999999999999999999999999999999988 689999999999999999999885 677999998764
Q ss_pred --CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEE
Q 013901 331 --KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408 (434)
Q Consensus 331 --~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~i 408 (434)
..++|+.|||+.+++++|.+++||+||||++|++|+|.+||++++|++++||++||||+|.+.++++++++++|+|+|
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v 391 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI 391 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhh--hhh-hhhhhcCCCCcc
Q 013901 409 NDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 409 N~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
|+++.+. ..| +..+.||+|+++
T Consensus 392 N~~~~~~~~~~PfgG~~~SG~G~~~ 416 (432)
T cd07105 392 NGMTVHDEPTLPHGGVKSSGYGRFN 416 (432)
T ss_pred CCCCCCCCCCCCCCCcccccccccC
Confidence 9977654 223 666888998873
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-80 Score=624.38 Aligned_cols=422 Identities=16% Similarity=0.187 Sum_probs=372.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhh-hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTF-ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~-~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++. +..|++++++.|++|+ +.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+
T Consensus 28 tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~-~ev~~~ 105 (521)
T PRK11903 28 TGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSA-VDIDGG 105 (521)
T ss_pred CCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 5788999997 8899999999999995 999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhccccccccc--c--cc-CCCcceEeeec-ceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCC
Q 013901 83 KTSIKSALKELKHWMTPEKAKTS--I--TT-FPSSAEIVPEP-FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~~~P-~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~ 156 (434)
++.+++++++.+.+.+....... . .. ......+.++| +|||++|+|||||+...++++++||++||+||+|||+
T Consensus 106 i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~ 185 (521)
T PRK11903 106 IFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPAT 185 (521)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 99999999988765432211100 0 00 12234677889 5999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhh--cCCCcEEEEeCCh-HhHHHHhcCCCCeEEEeCChHHHHHHHHHH--hcccCceEEecCCCCc
Q 013901 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAV-AETSALLDQKWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGKSP 231 (434)
Q Consensus 157 ~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~-~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~--~~~~~p~~~e~gG~~~ 231 (434)
.+|.++..+.+++.++ +|+|++|+++|+. +.+..| .++|.|.||||+.+|+.+.+.+ +++++|+++|+|||||
T Consensus 186 ~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp 263 (521)
T PRK11903 186 ATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNS 263 (521)
T ss_pred cChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCc
Confidence 9999999999999886 7999999999843 433333 3499999999999999999865 4788999999999999
Q ss_pred eEEcCCCC-----HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHH
Q 013901 232 VVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSN 305 (434)
Q Consensus 232 ~iv~~dad-----~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~ 305 (434)
+||++||| ++.+++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.
T Consensus 264 ~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~ 342 (521)
T PRK11903 264 ALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRA 342 (521)
T ss_pred eEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHH
Confidence 99999999 5999999999999 99999999999999999999999999999999999999964 78999999999
Q ss_pred HHHHHHHHHHHhhhCCeeeecCccC-------CCCcccccEEEEeCCC--CCCccccccccceeeEeecCCHHHHHHHHh
Q 013901 306 HFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDSFDIIN 376 (434)
Q Consensus 306 ~~~~~~~~i~~a~~~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 376 (434)
+++++.++|+...+|+++++||... .+|+|++|||+.++++ ++.+++||+||||++|++|+|++|+|+++|
T Consensus 343 ~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N 422 (521)
T PRK11903 343 QLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALAR 422 (521)
T ss_pred HHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHh
Confidence 9999999999777789999999641 2488999999987654 468889999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEECCCch------h-----hhhhhhhhhcCCCCcc
Q 013901 377 SGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAV------H-----VIMLALLKNHTLLRSC 430 (434)
Q Consensus 377 ~~~~gl~~~i~t~d~~~~~~~~~~~--~~g~v~iN~~~~------~-----~~~~~~~~~~~~~~~~ 430 (434)
+++|||++||||+|.++++++++++ ++|+|+||+.+. + ...-+..|.||+||+.
T Consensus 423 ~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~ 489 (521)
T PRK11903 423 RGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEEL 489 (521)
T ss_pred cCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCccc
Confidence 9999999999999999999999999 899999997542 1 1123677999999883
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=638.76 Aligned_cols=420 Identities=17% Similarity=0.197 Sum_probs=373.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A-~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+ .|+++++++|++| |+.|+.+|.++|.++|+++++.|++++++|++ +++|+|||+.+++ .|+..+
T Consensus 24 tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~-~ev~~~ 100 (663)
T TIGR02278 24 TGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNW-VDIDGG 100 (663)
T ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHH-HHHHHH
Confidence 678899999999 5999999999996 99999999999999999999999999999999 5999999999997 699999
Q ss_pred HHHHHHHHHHHHhhcccccc----c-cccccC-CCcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKHWMTPEKA----K-TSITTF-PSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps 155 (434)
++.++++++..+.+..+... . .+.... ....+++++|+ |||++|+|||||+...++++++||++||+||+|||
T Consensus 101 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs 180 (663)
T TIGR02278 101 IGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPA 180 (663)
T ss_pred HHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99999999988764321100 0 000001 12468899998 99999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhh--cCCCcEEEEeCChHhHHHHhcC-C-CCeEEEeCChHHHHHHHHHH--hcccCceEEecCCC
Q 013901 156 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGK 229 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~~~~~~L~~~-~-v~~v~ftGs~~~~~~v~~~~--~~~~~p~~~e~gG~ 229 (434)
+.+|.++..+.+++.++ +|+|++|+++|+.. . +..+ + +|.|.||||+++|+.|.+.+ +++++|+++|+|||
T Consensus 181 ~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~--~-~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk 257 (663)
T TIGR02278 181 TPTAYVAEALVRTMVESGLLPEGSLQLICGSAG--D-LLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSL 257 (663)
T ss_pred CcchHHHHHHHHHHHHhCCCCCCcEEEEeCChH--H-HHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCC
Confidence 99999999999999997 79999999998522 2 2322 4 89999999999999999874 47899999999999
Q ss_pred CceEEcCCCC-----HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCC
Q 013901 230 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVN 303 (434)
Q Consensus 230 ~~~iv~~dad-----~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~ 303 (434)
||+||++||| ++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|.+ ++++||+++
T Consensus 258 ~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~ 336 (663)
T TIGR02278 258 NAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS 336 (663)
T ss_pred CeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCC
Confidence 9999999999 9999999999999 99999999999999999999999999999999999999964 789999999
Q ss_pred HHHHHHHHHHHHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCC-CccccccccceeeEeecCCHHHHHHHHhcCCCC
Q 013901 304 SNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDS-LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 381 (434)
Q Consensus 304 ~~~~~~~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 381 (434)
+.+++++.++|+++. +|+++++||..+.+|+|++|||+.+++++| .+++||+||||++|++|+|.+||++++|+++||
T Consensus 337 ~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~g 416 (663)
T TIGR02278 337 LEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416 (663)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCC
Confidence 999999999999995 578999999765568999999999998886 789999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhc--ceeeEEE-CCCc-----hh-----hhhhhhhhhcCCCCcc
Q 013901 382 LAAYLFTNNKKLKQQFVETV--SAGGLVI-NDTA-----VH-----VIMLALLKNHTLLRSC 430 (434)
Q Consensus 382 l~~~i~t~d~~~~~~~~~~~--~~g~v~i-N~~~-----~~-----~~~~~~~~~~~~~~~~ 430 (434)
|++||||+|.+.++++++++ ++|.|+| |+.. .+ ...-+..|.||+||+.
T Consensus 417 L~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~ 478 (663)
T TIGR02278 417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEEL 478 (663)
T ss_pred ceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCcc
Confidence 99999999999999999999 8999999 6421 11 1123667999999984
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-79 Score=615.91 Aligned_cols=418 Identities=23% Similarity=0.326 Sum_probs=379.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|+++ |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 8 tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 83 (451)
T cd07146 8 TGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-YEVGRAA 83 (451)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 57889999999999999999999875 8889999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccc-cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.+++++++...+.+....... ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 84 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 163 (451)
T cd07146 84 DVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSA 163 (451)
T ss_pred HHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHH
Confidence 9999999887765432211110 001234567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+.+++.++ +|+|++++++++ .+.+..|++|+ +|.|.||||+.+++.+.+.++ .+|+++|+|||||+||++|||
T Consensus 164 ~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~~daD 241 (451)
T cd07146 164 IYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVMDDAD 241 (451)
T ss_pred HHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEECCCCC
Confidence 9999999998 999999999984 56788999996 999999999999999998775 689999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++.
T Consensus 242 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~ 320 (451)
T cd07146 242 LERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAI 320 (451)
T ss_pred HHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5789999999999999999999984
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
.|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++||++++|++++||+++|||+|.++++++
T Consensus 321 ~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~ 398 (451)
T cd07146 321 AQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRL 398 (451)
T ss_pred hCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67899999865 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh---hhhhhhhhcCC-CCcc
Q 013901 398 VETVSAGGLVINDTAVHV---IMLALLKNHTL-LRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~---~~~~~~~~~~~-~~~~ 430 (434)
++++++|+|+||+.+.+. ..-+..|.||+ ||++
T Consensus 399 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~ 435 (451)
T cd07146 399 VERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEG 435 (451)
T ss_pred HHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccC
Confidence 999999999999865433 22267788885 7764
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-80 Score=570.71 Aligned_cols=407 Identities=52% Similarity=0.874 Sum_probs=391.0
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~ 98 (434)
+++.++++|.+|.+.++.|.+.|.+.|+++.+.+++|+++|.+++..|++|+..++...|+...++.++++++++.+|.+
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcE
Q 013901 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178 (434)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v 178 (434)
+............+.+++.+|+|||++|+|||||+...+.++++||+|||+||+|||+.+|.++..|++++-+.++.+++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~ 163 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI 163 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence 98887766666788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCC
Q 013901 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258 (434)
Q Consensus 179 ~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq 258 (434)
.+|.|+.+...+|++++.|.|.||||+.+|+.++.+++++++|+++|+|||+|++|++|+|++-+++.|+++++ .|+||
T Consensus 164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQ 242 (477)
T KOG2456|consen 164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQ 242 (477)
T ss_pred EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCC
Confidence 99999877778899999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCccccc
Q 013901 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP 338 (434)
Q Consensus 259 ~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~P 338 (434)
.|.++++|+++.+++++++++++..+++.++.+|.++.+++.++++.+++|+..++++- ++|++||..+....|+.|
T Consensus 243 tCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~I~P 319 (477)
T KOG2456|consen 243 TCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRYIAP 319 (477)
T ss_pred eeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcccCC
Confidence 99999999999999999999999999999999999999999999999999999998732 899999999888899999
Q ss_pred EEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhhhh
Q 013901 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIML 418 (434)
Q Consensus 339 tv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~ 418 (434)
||+.++++++++|+||+||||++|+.+++++|+|+++|+.+..|++|+||+|.+..+||.+++.+|.|.+||..+|....
T Consensus 320 TIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~ 399 (477)
T KOG2456|consen 320 TILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLD 399 (477)
T ss_pred eEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998666
Q ss_pred ----hhhhhcCCCCc
Q 013901 419 ----ALLKNHTLLRS 429 (434)
Q Consensus 419 ----~~~~~~~~~~~ 429 (434)
+.+.+||+||+
T Consensus 400 ~lPFGGVG~SGmG~Y 414 (477)
T KOG2456|consen 400 SLPFGGVGESGMGRY 414 (477)
T ss_pred ccCcCCcCccccccc
Confidence 55688899987
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-79 Score=613.57 Aligned_cols=406 Identities=25% Similarity=0.386 Sum_probs=372.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM 97 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~ 97 (434)
|++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++.++++++...+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999999999999999999999986 599999999999988776543
Q ss_pred cccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH-HHHHHHHHHhh-cCC
Q 013901 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS-SSLLAKLVGEY-MDL 175 (434)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~-~~~l~~~~~~a-lp~ 175 (434)
+.. ... ...+..++++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus 80 ~~~-~~~--~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~ 156 (431)
T cd07104 80 GEI-LPS--DVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK 156 (431)
T ss_pred Ccc-ccC--CCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence 221 111 1134567899999999999999999999999999999999999999999999987 56789999998 999
Q ss_pred CcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcc
Q 013901 176 SSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 253 (434)
Q Consensus 176 g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~ 253 (434)
|++|+++++ .+.+..|+.|+ +|.|.||||+.+++.+.+.++++++|+++|+|||||+||++|||++.|++.|++++|
T Consensus 157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~- 235 (431)
T cd07104 157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF- 235 (431)
T ss_pred ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-
Confidence 999999984 55788899986 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccCC
Q 013901 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK 331 (434)
Q Consensus 254 ~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~ 331 (434)
+|+||.|+++++||||++++++|+++|++++.++++|+|.+ .+++||++++.+++++.++++++. +|+++++||..
T Consensus 236 ~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~-- 313 (431)
T cd07104 236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY-- 313 (431)
T ss_pred hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence 99999999999999999999999999999999999999964 789999999999999999999885 67899999875
Q ss_pred CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCC
Q 013901 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411 (434)
Q Consensus 332 ~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 411 (434)
+|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.++++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhh--hhh-hhhhhcCCCCcc
Q 013901 412 AVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 412 ~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+.+. ..| +..+.||+|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~ 415 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFG 415 (431)
T ss_pred CCCCCCCCCCCCcccccCCccc
Confidence 7664 122 456888888864
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-79 Score=616.17 Aligned_cols=421 Identities=26% Similarity=0.389 Sum_probs=383.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|.+++++|++++++|+|||..++. .|+..++
T Consensus 8 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 86 (453)
T cd07149 8 DGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAI 86 (453)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccc-cCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.++.+.+......... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~ 166 (453)
T cd07149 87 ETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSA 166 (453)
T ss_pred HHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence 999999888776543221110000 1123457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+.+++.++ +|+|++++++++ .+.+..|+.|+ +|.|.||||+.+++.+.+.+. ++|+++|+|||||+||++|+|
T Consensus 167 ~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~~dad 244 (453)
T cd07149 167 LKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDADAD 244 (453)
T ss_pred HHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEECCCCC
Confidence 9999999998 999999999985 45588899986 999999999999999998874 789999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++.+++++.++++++.
T Consensus 245 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~ 323 (453)
T cd07149 245 LEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAV 323 (453)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999964 789999999999999999999985
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
.|+++++||.. .++|++|||+.++++++.++++|+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 324 ~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~ 401 (453)
T cd07149 324 EGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKA 401 (453)
T ss_pred HCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHH
Confidence 67799999876 488999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh--hh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+.. .| +..+.||+||++
T Consensus 402 ~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~ 437 (453)
T cd07149 402 ARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREG 437 (453)
T ss_pred HHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCC
Confidence 9999999999998764421 22 667899999873
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-79 Score=616.78 Aligned_cols=406 Identities=19% Similarity=0.275 Sum_probs=372.6
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..|++.+++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++
T Consensus 62 ~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 140 (500)
T TIGR01238 62 RDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVD 140 (500)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++++++..+.++. ...++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 141 ~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~ 205 (500)
T TIGR01238 141 FCRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYR 205 (500)
T ss_pred HHHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHH
Confidence 99999988765432 135899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc---CceEEecCCCCceEEcCCC
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL---TPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~---~p~~~e~gG~~~~iv~~da 238 (434)
+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+++.|.+.+++++ +|+++|+|||||+||++||
T Consensus 206 l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dA 285 (500)
T TIGR01238 206 AVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTA 285 (500)
T ss_pred HHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCC
Confidence 99999998 999999999984 57888899886 999999999999999999999876 7999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 286 dld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 364 (500)
T TIGR01238 286 LPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHM 364 (500)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999995 588999999999999999999998
Q ss_pred hh-CCeeeecCc---c-CCCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCC
Q 013901 318 KV-SGKIVHGGE---R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 318 ~~-~~~v~~gg~---~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
.. |++++.|+. . ..+|+|++|||+.. +++.++++|+||||++|++|+ +++|||+++|++++||+++|||+|
T Consensus 365 ~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d 442 (500)
T TIGR01238 365 SQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442 (500)
T ss_pred HHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCC
Confidence 64 556653322 1 23589999999973 688899999999999999998 799999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhhh----hhhhhhhcCCC-Cc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHVI----MLALLKNHTLL-RS 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~~----~~~~~~~~~~~-~~ 429 (434)
.+.++++++++++|+|+||+...+.. .-+..+.||+| ++
T Consensus 443 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 486 (500)
T TIGR01238 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKA 486 (500)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcc
Confidence 99999999999999999999776542 22666888998 55
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-78 Score=605.52 Aligned_cols=416 Identities=15% Similarity=0.186 Sum_probs=370.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhc--CCCCHHHH----HHHHHHHHHHHHhc--HHHHHHHHHhhcCCCchhhh
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASG--KTKSYGWR----VSQLKSLMKMLNER--EPDIVDALRQDLDKPELESS 75 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w--~~~~~~~R----~~~l~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~ 75 (434)
+++.+.+++.++.+|+++++++|++||+.| +.++..+| .++|+++++.|+++ .++|++++++|+|||+.+++
T Consensus 21 t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~ 100 (489)
T cd07126 21 NGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL 100 (489)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH
Confidence 678899999999999999999999999988 55779999 89999999999998 59999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCC
Q 013901 76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 76 ~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps 155 (434)
.|+..+++.++++++..+...+..... .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 101 -~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPS 178 (489)
T cd07126 101 -GEVVVTRKFLENFAGDQVRFLARSFNV-PGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178 (489)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCceecc-CCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 699999999999998877654432100 111124467899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceE
Q 013901 156 EVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~i 233 (434)
+.+|.++.+|.+++.++ +|+|++|+++|+.+.+..++.|+ +|.|.||||+.+|+.+...++ +++.+|+||+||+|
T Consensus 179 e~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~~~I 255 (489)
T cd07126 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFDWKI 255 (489)
T ss_pred CCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCCceE
Confidence 99999999999999998 99999999999544456677775 999999999999999988876 67999999999999
Q ss_pred EcCCC-CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCc-HHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHH
Q 013901 234 FDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311 (434)
Q Consensus 234 v~~da-d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~ 311 (434)
|++|| |+|.|++.+++++| .|+||.|++++|+|||+++ +++|+++|+++++++++|+ +++||++++. .+++.
T Consensus 256 V~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~v~ 329 (489)
T cd07126 256 LGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TERIL 329 (489)
T ss_pred ECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHHHH
Confidence 99999 99999999999999 9999999999999999995 6899999999999998774 5899999998 89999
Q ss_pred HHHHHhh--hCCeeeecCccCC-----CC-cccccEEEEe------CCCCCCccccccccceeeEeecCC--HHHHHHHH
Q 013901 312 KLLDDDK--VSGKIVHGGERDK-----NK-LRIAPTLLLD------VPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII 375 (434)
Q Consensus 312 ~~i~~a~--~~~~v~~gg~~~~-----~~-~~~~Ptv~~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~ 375 (434)
++++++. +|+++++||..+. .+ .|++|||+.. ++++|++++||+||||++|++|+| ++||++++
T Consensus 330 ~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~a 409 (489)
T cd07126 330 DHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEAL 409 (489)
T ss_pred HHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHH
Confidence 9999985 6889999997642 23 3899999852 567999999999999999999999 99999999
Q ss_pred hcCCCCcEEEEecCCHHHHHHHHhhcceee--EEECCCchhhhh-----h-hhhhhcCCCCcc
Q 013901 376 NSGTKPLAAYLFTNNKKLKQQFVETVSAGG--LVINDTAVHVIM-----L-ALLKNHTLLRSC 430 (434)
Q Consensus 376 n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~--v~iN~~~~~~~~-----~-~~~~~~~~~~~~ 430 (434)
|+++|||++||||+|.++++++++++++|. |+||+.+++... | +..|.||+||+.
T Consensus 410 N~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~ 472 (489)
T cd07126 410 ERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPE 472 (489)
T ss_pred hCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHh
Confidence 999999999999999999999999999999 669987665432 2 677999999983
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-78 Score=612.84 Aligned_cols=420 Identities=24% Similarity=0.352 Sum_probs=386.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCC-CHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTK-SYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~-~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++.++..++++++++|++|++.|+++ |.++|.++|+++++.|.+++++|++++++|+|||..++. .|+..+
T Consensus 25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~ 103 (473)
T cd07082 25 DGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRT 103 (473)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHH
Confidence 678899999999999999999999999999988 999999999999999999999999999999999999986 599999
Q ss_pred HHHHHHHHHHHHhhccccccccccc--cCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
++.++++++..+.+.+... ..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 104 ~~~l~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~ 182 (473)
T cd07082 104 IDYIRDTIEELKRLDGDSL-PGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182 (473)
T ss_pred HHHHHHHHHHHHHhcCCcc-cccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 9999999998887644322 11110 12445688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
++..+.+++.++ +|+|+++++++ +.+.+..|+.|+ +|.|.||||..+++.+.+.++ ++|+++|+||+||+||++|
T Consensus 183 ~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~d 260 (473)
T cd07082 183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIVLPD 260 (473)
T ss_pred HHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEECCC
Confidence 999999999997 99999999998 455688898886 999999999999999999876 7999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|.++++++++|+|.+ .+++||++++++++++.+++++
T Consensus 261 adl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~ 339 (473)
T cd07082 261 ADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDD 339 (473)
T ss_pred CCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999965 6899999999999999999998
Q ss_pred hh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 317 DK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 317 a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+. .|+++++||... .++|++|||+.+++++++++++|+||||++|++|+|++|+|+++|++++||+++|||+|.+.++
T Consensus 340 a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 418 (473)
T cd07082 340 AVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKAR 418 (473)
T ss_pred HHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHH
Confidence 85 678999999864 3899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCc
Q 013901 396 QFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRS 429 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~ 429 (434)
++++++++|+|+||+++.+. ..| +..+.||+||+
T Consensus 419 ~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~ 455 (473)
T cd07082 419 KLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQ 455 (473)
T ss_pred HHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCC
Confidence 99999999999999977553 123 66789999987
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=598.98 Aligned_cols=380 Identities=24% Similarity=0.397 Sum_probs=350.1
Q ss_pred HHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEE
Q 013901 45 LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVL 124 (434)
Q Consensus 45 l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 124 (434)
|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++++.+.+..... ... ..+...+++++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-CCC--CCCceeEEEEecccEEE
Confidence 5789999999999999999999999999997 6999999999999988776543221 110 12345788999999999
Q ss_pred EEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEE
Q 013901 125 IISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICY 201 (434)
Q Consensus 125 ~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~f 201 (434)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999998 99999999998 566788899887 999999
Q ss_pred eCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHH
Q 013901 202 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281 (434)
Q Consensus 202 tGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~ 281 (434)
|||+.+|+.+.+.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|+++++||||++++++|+++|+
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~ 235 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLG 235 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhcccCCCCCC--CCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccCC-CCcccccEEEEeCCCCCCcccccccc
Q 013901 282 NELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFG 357 (434)
Q Consensus 282 ~~~~~~~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fg 357 (434)
++++++++|+|.+ ++++||++++.+++++.++|+++. +|+++++||..+. .|+|++|||+.+++++|++++||+||
T Consensus 236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg 315 (409)
T PRK10090 236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG 315 (409)
T ss_pred HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence 9999999999964 679999999999999999999985 6789999997643 57899999999999999999999999
Q ss_pred ceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhhh-h-hhhhhcCCCCc
Q 013901 358 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM-L-ALLKNHTLLRS 429 (434)
Q Consensus 358 Pvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~-~-~~~~~~~~~~~ 429 (434)
||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||+...+... | +..|+||+||+
T Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~ 389 (409)
T PRK10090 316 PVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGA 389 (409)
T ss_pred ceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcc
Confidence 999999999999999999999999999999999999999999999999999997766632 3 67799999987
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-78 Score=632.01 Aligned_cols=419 Identities=16% Similarity=0.246 Sum_probs=370.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A-~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+ .|+++++++|++| ++.|+++|..+|.++|+++++.|++++++|++ ++.|+|||..+++ .|+..+
T Consensus 28 tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~ 104 (675)
T PRK11563 28 TGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSW-IDIEGG 104 (675)
T ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHH
Confidence 678899999887 5999999999998 79999999999999999999999999999998 5899999999997 599999
Q ss_pred HHHHHHHHHHHHhhcccccc--cc---ccccCC-CcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKHWMTPEKA--KT---SITTFP-SSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~-~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps 155 (434)
++.+++++.+++........ .+ +....+ ...++.++|+ |||++|+|||||++..++++++||++||+||+|||
T Consensus 105 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPs 184 (675)
T PRK11563 105 IGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA 184 (675)
T ss_pred HHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECC
Confidence 99999999887654321100 00 000011 2257889997 99999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhh--cCCCcEEEEeCChHhHHHHhcC-C-CCeEEEeCChHHHHHHHHH--HhcccCceEEecCCC
Q 013901 156 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAA--AAKHLTPVLLELGGK 229 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~~~~~~L~~~-~-v~~v~ftGs~~~~~~v~~~--~~~~~~p~~~e~gG~ 229 (434)
+.+|.++..+.+++.++ +|+|++|+++|+.. . +..+ + +|.|.||||+++|+.|.+. ++++++|+++|+|||
T Consensus 185 e~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGk 261 (675)
T PRK11563 185 TATAYLTEAVVRLIVESGLLPEGALQLICGSAG--D-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSL 261 (675)
T ss_pred CCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCc
Confidence 99999999999999996 89999999998522 2 3333 3 8999999999999999985 447899999999999
Q ss_pred CceEEcCCCC-----HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCC
Q 013901 230 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVN 303 (434)
Q Consensus 230 ~~~iv~~dad-----~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~ 303 (434)
||+||++||| +|.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++++++|+|. +++++||+++
T Consensus 262 np~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~ 340 (675)
T PRK11563 262 NAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALAS 340 (675)
T ss_pred CceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcC
Confidence 9999999995 9999999999999 9999999999999999999999999999999999999996 5789999999
Q ss_pred HHHHHHHHHHHHHhhhCCeeeecCccC--------CCCcccccEEEEeCCC--CCCccccccccceeeEeecCCHHHHHH
Q 013901 304 SNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDSFD 373 (434)
Q Consensus 304 ~~~~~~~~~~i~~a~~~~~v~~gg~~~--------~~~~~~~Ptv~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~ 373 (434)
+.+++++.++|+++.+.+++++||... ..|+|++|||+.++++ ++.+++||+||||++|++|+|++|||+
T Consensus 341 ~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~ 420 (675)
T PRK11563 341 LEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIE 420 (675)
T ss_pred HHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHH
Confidence 999999999999996559999999531 2589999999999998 578999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEECCCch------h-----hhhhhhhhhcCCCCc
Q 013901 374 IINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV------H-----VIMLALLKNHTLLRS 429 (434)
Q Consensus 374 ~~n~~~~gl~~~i~t~d~~~~~~~~~~~~--~g~v~iN~~~~------~-----~~~~~~~~~~~~~~~ 429 (434)
++|+++|||++||||+|.+++.+++++++ +|.||||+.+. + ...-+..|.||+||+
T Consensus 421 ~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~ 489 (675)
T PRK11563 421 LAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEE 489 (675)
T ss_pred HHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCcc
Confidence 99999999999999999999999999997 99999997531 1 112256799999998
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-78 Score=645.72 Aligned_cols=415 Identities=20% Similarity=0.296 Sum_probs=383.5
Q ss_pred chhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHH
Q 013901 6 ETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTS 85 (434)
Q Consensus 6 ~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~ 85 (434)
+.+++++.++..+++++++.|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+||+..++. .|+..+++.
T Consensus 574 ~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~eaid~ 652 (1038)
T PRK11904 574 RVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDF 652 (1038)
T ss_pred eeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999999999999999999999996 799999999
Q ss_pred HHHHHHHHHhhccc-cccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 86 IKSALKELKHWMTP-EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
+++++.+.+.+.+. ...+. ..+..++++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..
T Consensus 653 lr~ya~~a~~~~~~~~~l~g---~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~ 729 (1038)
T PRK11904 653 CRYYAAQARRLFGAPEKLPG---PTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729 (1038)
T ss_pred HHHHHHHHHHhhCCCcccCC---CCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHH
Confidence 99999998877532 22222 135778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCC
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~da 238 (434)
+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|.||||+.+++.+.+.++.+ .+|+++|+|||||+||++||
T Consensus 730 l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dA 809 (1038)
T PRK11904 730 AVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTA 809 (1038)
T ss_pred HHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCC
Confidence 99999998 999999999995 45788999987 99999999999999999988865 68999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|+|.|++.+++|+| .++||.|+++++||||++++++|+++|+++++++++|+|. .++++||++++.+++++.++|+++
T Consensus 810 dld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a 888 (1038)
T PRK11904 810 LPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERM 888 (1038)
T ss_pred CHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 488999999999999999999999
Q ss_pred hhCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 KVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
..++++++||..++ .|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+
T Consensus 889 ~~ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~ 966 (1038)
T PRK11904 889 KREARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEE 966 (1038)
T ss_pred HcCCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHH
Confidence 88899999997643 489999999863 567789999999999999997 69999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhhhhh----hhhhhcCCC
Q 013901 393 LKQQFVETVSAGGLVINDTAVHVIML----ALLKNHTLL 427 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~ 427 (434)
.++++++++++|+|+||+.+++...+ +..+.||.|
T Consensus 967 ~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G 1005 (1038)
T PRK11904 967 TADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005 (1038)
T ss_pred HHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCC
Confidence 99999999999999999987765422 556788888
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-76 Score=634.90 Aligned_cols=405 Identities=18% Similarity=0.264 Sum_probs=372.5
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++.++..+++.+++.|++|++.|+.+|.++|.++|+++++.|++++++|+.+++.|+||+..++. .|+..+++
T Consensus 670 ~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eaid 748 (1318)
T PRK11809 670 RDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVD 748 (1318)
T ss_pred CeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++|++.+.+..+. ...++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..
T Consensus 749 flryyA~~a~~~~~---------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~ 813 (1318)
T PRK11809 749 FLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQ 813 (1318)
T ss_pred HHHHHHHHHHHhcC---------------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHH
Confidence 99999988764211 246899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc------CceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~------~p~~~e~gG~~~~iv~ 235 (434)
+++++.++ +|+|++|+++|+ .+.+..|+.|+ |+.|+||||+++|+.|.+.+++++ +|+++|+||+|++||+
T Consensus 814 lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVd 893 (1318)
T PRK11809 814 AVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVD 893 (1318)
T ss_pred HHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEEC
Confidence 99999999 999999999994 55788999997 999999999999999999988775 7999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|++++.++++|+|.+ ++++||++++.+.+++.++|
T Consensus 894 sdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I 972 (1318)
T PRK11809 894 SSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHI 972 (1318)
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999964 89999999999999999999
Q ss_pred HHhh-hCCeeeecCccC----CCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEe
Q 013901 315 DDDK-VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLF 387 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~ 387 (434)
+++. .|++++.||... ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|.++|||+++||
T Consensus 973 ~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~ 1050 (1318)
T PRK11809 973 QAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVH 1050 (1318)
T ss_pred HHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEE
Confidence 9995 566777776542 3599999999974 567789999999999999996 799999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 388 TNNKKLKQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 388 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
|+|.+.++++++++++|+|+||+..++... | +..+.||.|.
T Consensus 1051 Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~ 1095 (1318)
T PRK11809 1051 TRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP 1095 (1318)
T ss_pred eCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC
Confidence 999999999999999999999987765432 2 4557778774
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-75 Score=581.98 Aligned_cols=398 Identities=16% Similarity=0.205 Sum_probs=351.1
Q ss_pred HHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhc-c
Q 013901 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM-T 98 (434)
Q Consensus 20 ~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~-~ 98 (434)
+++++.|++|++.|+++|.++|.++|+++++.|++++++|+.++++|+|||. +.. .|+..++..+++++....... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence 5789999999999999999999999999999999999999999999999999 664 699999999999988876431 1
Q ss_pred ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-c-CCC
Q 013901 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M-DLS 176 (434)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-l-p~g 176 (434)
...............+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g 159 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence 11110000011345788999999999999999999999999999999999999999999999999999999998 6 999
Q ss_pred cEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC-CHHHHHHHHHHHhccc
Q 013901 177 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGC 254 (434)
Q Consensus 177 ~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da-d~~~aa~~i~~~~~~~ 254 (434)
++++++++.+.+..|+.|+ +|.|.||||+.+++.+.+.++. +|+++|+|||||+||++|| |+|.+++.+++++| .
T Consensus 160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~ 236 (442)
T cd07084 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-A 236 (442)
T ss_pred ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-c
Confidence 9999999656888899997 9999999999999999998875 8999999999999999999 69999999999999 9
Q ss_pred CCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-h-CCeeeecCccC-
Q 013901 255 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-V-SGKIVHGGERD- 330 (434)
Q Consensus 255 ~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~-~~~v~~gg~~~- 330 (434)
|+||.|+++++||||++ ++++|+++|+++++++++| ++++||++++.. .++++++. . |+++++||...
T Consensus 237 ~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~----~~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTT----LAMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHH----HHHHHHHHhcCCcEEEeCCcccc
Confidence 99999999999999999 9999999999999999988 689999977654 44455553 3 47999998752
Q ss_pred ------CCCcccccEEEEeCCCCC---CccccccccceeeEeecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 331 ------KNKLRIAPTLLLDVPRDS---LIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 331 ------~~~~~~~Ptv~~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+++++|++++||+++|||+|.+.++++++
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 388 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG 388 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence 148899999999999997 9999999999999999999 99999999999999999999999999999999
Q ss_pred hc-ceeeEEECCC-chhhh---hh-hhhhhcCCCCcc
Q 013901 400 TV-SAGGLVINDT-AVHVI---ML-ALLKNHTLLRSC 430 (434)
Q Consensus 400 ~~-~~g~v~iN~~-~~~~~---~~-~~~~~~~~~~~~ 430 (434)
++ ++|+||||+. +.... .. +..|.||+||+.
T Consensus 389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~ 425 (442)
T cd07084 389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGI 425 (442)
T ss_pred HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccc
Confidence 99 9999999976 22222 12 336789999885
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=584.64 Aligned_cols=401 Identities=16% Similarity=0.222 Sum_probs=346.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhH-H---HH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI-Y---EV 79 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-~---ei 79 (434)
+++.+.+++..+. ++++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++. + ++
T Consensus 74 t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~ 150 (551)
T TIGR02288 74 GVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQ 150 (551)
T ss_pred CCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHH
Confidence 4667888888884 899999999999999999999999999999999999999999999999999987741 1 67
Q ss_pred HHHHHHHHHHHHHHHhhccccc---cccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCC
Q 013901 80 ALLKTSIKSALKELKHWMTPEK---AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (434)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~ 156 (434)
.+.++.++++++....+.+... ............+++++|+||+++|+|||||++..++++++||++||+||+|||+
T Consensus 151 ~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~ 230 (551)
T TIGR02288 151 DRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHP 230 (551)
T ss_pred HHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCc
Confidence 7889999998888776543221 0000000111234578999999999999999999999999999999999999999
Q ss_pred CChHHHH----HHHHHHHhh-cCCCcEEEEeCC--hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCC
Q 013901 157 VAPASSS----LLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228 (434)
Q Consensus 157 ~~~~~~~----~l~~~~~~a-lp~g~v~~i~~~--~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG 228 (434)
.+|+++. .+.+++.++ +|+|+||+++++ .+.++.|+.|+ ++.|.||||+.+|+.|.+.++ .+++++|+||
T Consensus 231 ~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lElGG 308 (551)
T TIGR02288 231 GAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEKAG 308 (551)
T ss_pred ccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeecCC
Confidence 9998654 567899998 999999999973 56789999997 999999999999999999876 3899999999
Q ss_pred CCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCC---------cHHHHHHHHHHHHhcccCCCCCC-CCcc
Q 013901 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPLE-SKDL 298 (434)
Q Consensus 229 ~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~p~~-~~~~ 298 (434)
|||+||++|+|++.+++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++ +|+|.+ .+++
T Consensus 309 knp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~ 386 (551)
T TIGR02288 309 VNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVL 386 (551)
T ss_pred cCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccc
Confidence 999999999999999999999999 999999999999999999 7999999999999999 899964 7899
Q ss_pred cccCCHHHHHHHHHHHHHhhhCCeeeecCccC----CCC-cccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHH
Q 013901 299 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERD----KNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 373 (434)
Q Consensus 299 gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~----~~~-~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 373 (434)
||++++.+++++. ++...+++++||... .+| +|++|||+...+++|++++||+||||++|++|+|.+|||+
T Consensus 387 Gplis~~~~~ri~----~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~ 462 (551)
T TIGR02288 387 GAIQSPDTLARIA----EARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVE 462 (551)
T ss_pred cCcCCHHHHHHHH----HHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHH
Confidence 9999999999964 444444778877542 134 5889999954445999999999999999999999999999
Q ss_pred HHhcC--CCC-cEEEEecCCHHHHHHHHhhc----------ceeeEEECCCchhh
Q 013901 374 IINSG--TKP-LAAYLFTNNKKLKQQFVETV----------SAGGLVINDTAVHV 415 (434)
Q Consensus 374 ~~n~~--~~g-l~~~i~t~d~~~~~~~~~~~----------~~g~v~iN~~~~~~ 415 (434)
++|++ ++| |+++|||+|.++++++.+++ ++|.|+||.+..+.
T Consensus 463 ~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~ 517 (551)
T TIGR02288 463 LARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFS 517 (551)
T ss_pred HHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCC
Confidence 99998 566 99999999999999999999 99999999855443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=628.16 Aligned_cols=405 Identities=19% Similarity=0.298 Sum_probs=371.3
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++.++..+++++++.|++|++.|+.+|.++|.++|+++++.|++++++|+.++++|+||+..++. .|+..+++
T Consensus 578 ~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eaid 656 (1208)
T PRK11905 578 DDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAVD 656 (1208)
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 67789999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+.+.... ...++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..
T Consensus 657 ~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~ 721 (1208)
T PRK11905 657 FLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAAR 721 (1208)
T ss_pred HHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHH
Confidence 99999988765431 134679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCC
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~da 238 (434)
+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|.||||+.+++.+.+.++++ .+|+++|+|||||+||++||
T Consensus 722 l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dA 801 (1208)
T PRK11905 722 AVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSA 801 (1208)
T ss_pred HHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCC
Confidence 99999999 999999999995 45889999987 99999999999999999998876 48999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|+|.|++.+++|+| .++||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++
T Consensus 802 dle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a 880 (1208)
T PRK11905 802 LPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAM 880 (1208)
T ss_pred CHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999965 88999999999999999999999
Q ss_pred hhCCe-eeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 KVSGK-IVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~~~~~-v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
...++ ++.|+... ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+
T Consensus 881 ~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~ 958 (1208)
T PRK11905 881 RAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDE 958 (1208)
T ss_pred HHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHH
Confidence 76554 44444322 3589999999963 567889999999999999997 79999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhhhhh----hhhhhcCCCC
Q 013901 393 LKQQFVETVSAGGLVINDTAVHVIML----ALLKNHTLLR 428 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~ 428 (434)
.++++.+++++|+|+||+.+++...+ +..+.||.|+
T Consensus 959 ~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~ 998 (1208)
T PRK11905 959 TIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP 998 (1208)
T ss_pred HHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC
Confidence 99999999999999999987765432 5557777774
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-74 Score=579.97 Aligned_cols=400 Identities=18% Similarity=0.255 Sum_probs=352.9
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHh--h
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKH--W 96 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~--~ 96 (434)
++++++.|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++.++. +
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999999999999999999999999998886 6999999999999987764 2
Q ss_pred cccccccc-c--cccCCCcceEeeecceEEEEEcCCchhHHh--hHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH-
Q 013901 97 MTPEKAKT-S--ITTFPSSAEIVPEPFGVVLIISPWNYPFLL--SLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG- 170 (434)
Q Consensus 97 ~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~- 170 (434)
........ . ....+...+++++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 22111100 0 001123457899999999999999999987 45899999999999999999999999999988774
Q ss_pred ---hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc--ccCceEEecCCCCceEEcCCC---C
Q 013901 171 ---EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSGI---N 239 (434)
Q Consensus 171 ---~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~--~~~p~~~e~gG~~~~iv~~da---d 239 (434)
++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.+++ ++||+++|+|||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 55 99999999998 457889999997 9999999999999999999998 689999999999999999999 8
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++| |++++...++..+.++++.
T Consensus 240 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g---------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 240 GEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ---------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC---------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999 9999999999999998754 6777777778888888874
Q ss_pred -h-CCeeeecCccCCCCcccccEEEEeCC---CCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC--H
Q 013901 319 -V-SGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN--K 391 (434)
Q Consensus 319 -~-~~~v~~gg~~~~~~~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d--~ 391 (434)
. |+++++||..+.+++|++|||+...+ ++|.++++|+||||++|++|+|.+|+|+++|++++||++||||+| .
T Consensus 310 ~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 310 AAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred hcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 4 78999999765568999999998665 689999999999999999999999999999999999999999999 7
Q ss_pred HHHHHHHhhc--ceeeEEECCCchhh-----hhhhh-hhhcCCCCc
Q 013901 392 KLKQQFVETV--SAGGLVINDTAVHV-----IMLAL-LKNHTLLRS 429 (434)
Q Consensus 392 ~~~~~~~~~~--~~g~v~iN~~~~~~-----~~~~~-~~~~~~~~~ 429 (434)
+.++++++++ ++|+|+||+.+++. ...+. .|.||+||+
T Consensus 390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~ 435 (454)
T cd07129 390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRF 435 (454)
T ss_pred HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCcc
Confidence 9999999999 69999999865443 12345 899999998
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-74 Score=572.42 Aligned_cols=371 Identities=15% Similarity=0.167 Sum_probs=321.0
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~ 98 (434)
++++++.|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||+.+++. ++..+..... .+.......
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~--~~~~~~~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYI--YNVYKDEKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHH--HHHHhcccc
Confidence 4689999999999999999999999999999999999999999999999999998863 4443332111 111111111
Q ss_pred ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH----hh-c
Q 013901 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-M 173 (434)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~----~a-l 173 (434)
....+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. ++ +
T Consensus 78 ~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 78 CGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred CceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 110010 113345889999999999999999999999999999999999999999999999999988885 45 9
Q ss_pred CCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHh
Q 013901 174 DLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251 (434)
Q Consensus 174 p~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~ 251 (434)
|+|++|++++ +.+.++.|++|+ ||.|.||||+. +.+.+++++||+++|+|||+|+||++|||+|.|++.+++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~ 230 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSK 230 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 9999999998 567889999997 99999999987 56677788999999999999999999999999999999999
Q ss_pred cccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhh-CCeeeecCcc-
Q 013901 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER- 329 (434)
Q Consensus 252 ~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~v~~gg~~- 329 (434)
| +|+||.|++.+|+|||+++||+|+++|+++. ||+++..+++++.++|+++.. |+++ .||..
T Consensus 231 ~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~-~gg~~~ 294 (439)
T cd07081 231 T-FDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDI-VGQDAY 294 (439)
T ss_pred h-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcc-cCCCHH
Confidence 9 9999999999999999999999999998873 799999999999999998854 5555 55532
Q ss_pred ---CCCCcccccE---EEEeCC--CCCCccccccccceeeEeecCCHHHHHHHHhcC----CCCcEEEEecCC---HHHH
Q 013901 330 ---DKNKLRIAPT---LLLDVP--RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNN---KKLK 394 (434)
Q Consensus 330 ---~~~~~~~~Pt---v~~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~i~t~d---~~~~ 394 (434)
...|+|++|| ++.+++ ++|.+++||+||||++|++|+|++|||+++|++ +|||+++|||+| .+++
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a 374 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENM 374 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHH
Confidence 1258899998 998888 999999999999999999999999999999965 899999999999 9999
Q ss_pred HHHHhhcceeeEEECCCchhh
Q 013901 395 QQFVETVSAGGLVINDTAVHV 415 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~ 415 (434)
+++++++++|.|+||+++.+.
T Consensus 375 ~~~a~~l~~G~V~iN~~~~~~ 395 (439)
T cd07081 375 NQFANAMKTSRFVKNGPCSQG 395 (439)
T ss_pred HHHHhhCCceEEEEeCCcccc
Confidence 999999999999999876333
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-74 Score=571.08 Aligned_cols=382 Identities=16% Similarity=0.225 Sum_probs=328.9
Q ss_pred HHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhh
Q 013901 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW 96 (434)
Q Consensus 17 ~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~ 96 (434)
+|++.++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..++.. +.++++.+.....
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~-------~~~~~~~~~~~~~ 76 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI-------AKNHLAAEKTPGT 76 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------HHHHHHHHhcCcc
Confidence 479999999999999999999999999999999999999999999999999999877642 3455544422111
Q ss_pred ccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH----hh
Q 013901 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY 172 (434)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~----~a 172 (434)
. .. ............+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++. ++
T Consensus 77 ~-~~-~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~a 154 (429)
T cd07121 77 E-DL-TTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEA 154 (429)
T ss_pred c-cc-ccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHc
Confidence 0 00 000000112345788999999999999999999999999999999999999999999999999999885 45
Q ss_pred -cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHH
Q 013901 173 -MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 249 (434)
Q Consensus 173 -lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~ 249 (434)
+|+|++|++++ +.+.+..|++|+ +|.|.||||+.+|+.+.+. .||+++|+|||||+||++|||+|+|++.|++
T Consensus 155 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~ 230 (429)
T cd07121 155 GGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQ 230 (429)
T ss_pred CCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHh
Confidence 89999999998 567889999997 9999999999999999875 4999999999999999999999999999999
Q ss_pred HhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhh---CCeeeec
Q 013901 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV---SGKIVHG 326 (434)
Q Consensus 250 ~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~---~~~v~~g 326 (434)
++| +|+||.|+++++||||+++||+|+++|+++ .. +++++++.+++.++++++.+ ++++++|
T Consensus 231 ~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~~-------------~~i~~~~~~~v~~~i~~a~~~~~ga~~~~g 295 (429)
T cd07121 231 GAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-GA-------------YVLNDEQAEQLLEVVLLTNKGATPNKKWVG 295 (429)
T ss_pred ccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-CC-------------EEcCHHHHHHHHHhhcccCCCccccccccC
Confidence 999 999999999999999999999999999887 21 37889999999999998864 4688888
Q ss_pred Ccc----CCCCcccc---cEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHHH
Q 013901 327 GER----DKNKLRIA---PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTNNKKLKQQF 397 (434)
Q Consensus 327 g~~----~~~~~~~~---Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~i~t~d~~~~~~~ 397 (434)
|.. +..|.|+. |||+.+++++|+++++|+||||++|++|+|++|||+++|+++||| +++|||+|.+++++|
T Consensus 296 g~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~ 375 (429)
T cd07121 296 KDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKM 375 (429)
T ss_pred cCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHH
Confidence 853 12477877 599999999999999999999999999999999999999999998 999999999999999
Q ss_pred HhhcceeeEEECCCchhhhhhhhhhhcCC
Q 013901 398 VETVSAGGLVINDTAVHVIMLALLKNHTL 426 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~~~~~~~~~~~ 426 (434)
++++++|+||||+++.....-+..|+|++
T Consensus 376 a~~l~aG~v~iN~~~~~~~p~gG~k~s~~ 404 (429)
T cd07121 376 ARAMQTTIFVKNGPSYAGLGVGGEGYTTF 404 (429)
T ss_pred HhhCCceEEEEcCCCcCccccCCCccceE
Confidence 99999999999987552122244455544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-74 Score=527.66 Aligned_cols=425 Identities=26% Similarity=0.385 Sum_probs=398.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++-+..+|..++.|+++.+..|++|++.|...+...|.++|+.+.+.+-+|.|.+++..++||||...++.++||..+.
T Consensus 73 tg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTl 152 (583)
T KOG2454|consen 73 TGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTL 152 (583)
T ss_pred CcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+.|.+.+.++|+++...+..........+++++|+||++.|.|||||+.+.+.+++.||.+||++|+|-|+.+.++..
T Consensus 153 EKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~ 232 (583)
T KOG2454|consen 153 EKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGC 232 (583)
T ss_pred HHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehh
Confidence 99999999999999988766554444567899999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHhh-----cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-----lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
...++++.+ -|+++|+++++-++.+++|.+|+ ++.+.|.||..+++.+++.+++.++|+++|+|||+++||++|
T Consensus 233 fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dd 312 (583)
T KOG2454|consen 233 FYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDD 312 (583)
T ss_pred hHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEecc
Confidence 777766654 59999999999778899999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
+|++..+.-++++.| ..+||.|.+.+|++||+++|+.|+..|.++++.++.|.|. +..+||++++..+++.++.+++|
T Consensus 313 a~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~D 391 (583)
T KOG2454|consen 313 ADLSHVASIAMRGTF-QSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVND 391 (583)
T ss_pred ccHHHHHHHHHhhhh-hhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999885 67899999999999999999999
Q ss_pred hh-hCCeeeecCcc-----CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 317 DK-VSGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 317 a~-~~~~v~~gg~~-----~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
|. +|+++++||.+ .+.|.|++||++.+++++|++++||.||||++++.+++.|++++++|++++||+++||+.|
T Consensus 392 Av~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~d 471 (583)
T KOG2454|consen 392 AVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGD 471 (583)
T ss_pred HHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceecccc
Confidence 95 68899999975 3568999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhhhhh---hhhhhcCCCCc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHVIML---ALLKNHTLLRS 429 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~---~~~~~~~~~~~ 429 (434)
..+++++++++++|.|.|||+..+...+ +..|.||+||-
T Consensus 472 k~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrF 513 (583)
T KOG2454|consen 472 KHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRF 513 (583)
T ss_pred HHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcccc
Confidence 9999999999999999999988877555 66799999985
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-72 Score=565.98 Aligned_cols=405 Identities=30% Similarity=0.447 Sum_probs=371.3
Q ss_pred HHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhccc
Q 013901 20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTP 99 (434)
Q Consensus 20 ~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~ 99 (434)
+++++.|++|++.|+.+|.++|.++|+++++.|.+++++|++++++|+||+..+.. .|+..++..+++++...+.+.+.
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence 36889999999999999999999999999999999999999999999999988775 79999999999999888887654
Q ss_pred cccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCcE
Q 013901 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI 178 (434)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g~v 178 (434)
.... ...+..++.+++|+||+++|+|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus 80 ~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~ 156 (432)
T cd07078 80 VIPS---PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL 156 (432)
T ss_pred cccc---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence 4311 123567889999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred EEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCC
Q 013901 179 RVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN 256 (434)
Q Consensus 179 ~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~ 256 (434)
++++++. +....|+.|+ +|.|.||||..+++.+.+.++++++|+++|+||++++||++|+|++.|++.+++++| .++
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~ 235 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNA 235 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 9999854 4778899887 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-hCCeeeecCccCC--C
Q 013901 257 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--N 332 (434)
Q Consensus 257 Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~v~~gg~~~~--~ 332 (434)
||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+.+++.++++++. .|+++++||..+. .
T Consensus 236 Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~ 315 (432)
T cd07078 236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK 315 (432)
T ss_pred CCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence 9999999999999999999999999999999999994 6889999999999999999999885 6779999987754 4
Q ss_pred CcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCc
Q 013901 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 412 (434)
Q Consensus 333 ~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 412 (434)
|+|++|||+.+++++++++++|+||||++|++|++++||++++|+.++||+++|||+|.+.++++++++++|+|+||+++
T Consensus 316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 395 (432)
T cd07078 316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYS 395 (432)
T ss_pred CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hh-h--hhhhhhhhcCCCCc
Q 013901 413 VH-V--IMLALLKNHTLLRS 429 (434)
Q Consensus 413 ~~-~--~~~~~~~~~~~~~~ 429 (434)
++ . ..-+..+.||+|++
T Consensus 396 ~~~~~~~pfgG~~~sg~g~~ 415 (432)
T cd07078 396 VGAEPSAPFGGVKQSGIGRE 415 (432)
T ss_pred CCCCCCCCcCCcCcCcCCcc
Confidence 87 1 11134455666554
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-72 Score=563.64 Aligned_cols=372 Identities=17% Similarity=0.240 Sum_probs=326.1
Q ss_pred cCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHH
Q 013901 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK 91 (434)
Q Consensus 12 ~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~ 91 (434)
.....+|++++++.|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++. ..++++++
T Consensus 31 ~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 31 EMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAE 103 (465)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999988753 23444444
Q ss_pred HHHh--hccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH
Q 013901 92 ELKH--WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 92 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~ 169 (434)
.... +.... .....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 104 ~~~~~~~~~~~----~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll 179 (465)
T PRK15398 104 KTPGVEDLTTE----ALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELL 179 (465)
T ss_pred HhccccccccC----cccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHH
Confidence 4321 11111 01112345678899999999999999999999999999999999999999999999999999988
Q ss_pred Hh----h-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 170 GE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 170 ~~----a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
.+ + +|+|+++++++ +.+.+..|++|+ +|.|.||||+.+|+.+.+ ..+|+++|+|||||+||++|||++.
T Consensus 180 ~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 180 NEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHH
Confidence 74 5 89999999998 567888999997 999999999999999988 3589999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hCC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSG 321 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~ 321 (434)
|++.|++++| +|+||.|+++++||||++++|+|+++|+++. +|++++.+++++.++++++. .++
T Consensus 256 Aa~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~~~~ 320 (465)
T PRK15398 256 AARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGGTVN 320 (465)
T ss_pred HHHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhcccccc
Confidence 9999999999 9999999999999999999999999999861 26899999999999998653 344
Q ss_pred eeeecCcc----CCCCccc---ccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCc--EEEEecCCHH
Q 013901 322 KIVHGGER----DKNKLRI---APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTNNKK 392 (434)
Q Consensus 322 ~v~~gg~~----~~~~~~~---~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~i~t~d~~ 392 (434)
+++.||.. ...|+++ .|||+.+++++|++++||+||||++|++|+|++||++++|+++||| ++||||+|.+
T Consensus 321 ~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~ 400 (465)
T PRK15398 321 KKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVD 400 (465)
T ss_pred hhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHH
Confidence 67777642 1236655 3799999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHhhcceeeEEECCCch
Q 013901 393 LKQQFVETVSAGGLVINDTAV 413 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~ 413 (434)
++++|++++++|+|+||.++.
T Consensus 401 ~a~~~a~~l~~G~V~iN~~~~ 421 (465)
T PRK15398 401 NLNKMARAIQTSIFVKNGPSY 421 (465)
T ss_pred HHHHHHHhCCceEEEECCCCc
Confidence 999999999999999998753
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-71 Score=558.11 Aligned_cols=395 Identities=18% Similarity=0.243 Sum_probs=342.1
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhH----HHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI----YEVA 80 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~----~ei~ 80 (434)
++.+.+++.+ +++.++++|++|++.|++++.++|.++|++++++|.+++++|+.+++.|+||+..++.. .|++
T Consensus 75 ~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd 151 (549)
T cd07127 75 VELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQD 151 (549)
T ss_pred CcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHH
Confidence 4445566665 89999999999999999999999999999999999999999999999999999987752 1799
Q ss_pred HHHHHHHHHHHHHHhhcccccc-ccccc--cCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCC
Q 013901 81 LLKTSIKSALKELKHWMTPEKA-KTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~ 157 (434)
.+++.++++.+........... ..... ......+.+++|+||+++|+|||||+++.+.++++||++||+||+|||+.
T Consensus 152 ~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~ 231 (549)
T cd07127 152 RGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPA 231 (549)
T ss_pred HHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 9999999999887765332110 00000 01112345789999999999999999999999999999999999999999
Q ss_pred ChHHHH----HHHHHHHhh-cCCCcEEEEeCC--hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCC
Q 013901 158 APASSS----LLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229 (434)
Q Consensus 158 ~~~~~~----~l~~~~~~a-lp~g~v~~i~~~--~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~ 229 (434)
+++++. .+.++|.++ +|+|+||+++++ .+.+..|+.|+ ++.|.||||+.+|+.|.+.++. +|+++|+|||
T Consensus 232 a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~--~~v~~ElGGk 309 (549)
T cd07127 232 AILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQVYTEKAGV 309 (549)
T ss_pred cchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc--CcEEEecCCc
Confidence 998754 456888898 999999999973 46788999997 9999999999999999999874 7999999999
Q ss_pred CceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCC---------cHHHHHHHHHHHHhcccCCCCCC-CCccc
Q 013901 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPLE-SKDLS 299 (434)
Q Consensus 230 ~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~p~~-~~~~g 299 (434)
||+||++|+|++.+++.+++|+| .|+||.|+++++||||++ ++|+|+++|+++++++ +|+|.+ .+++|
T Consensus 310 n~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~G 387 (549)
T cd07127 310 NTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLG 387 (549)
T ss_pred CeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccC
Confidence 99999999999999999999999 999999999999999999 8999999999999999 899964 78999
Q ss_pred ccCCHHHHHHHHHHHHHhhhCCeeeecCccCC----CC-cccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHH
Q 013901 300 RIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374 (434)
Q Consensus 300 pl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~----~~-~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 374 (434)
|++++.+++++.+.+ ..+++++||..+. .| ++++|||+..++++|++++||+||||++|++|+|.+|++++
T Consensus 388 pli~~~~~~ri~~a~----~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~ 463 (549)
T cd07127 388 AIQSPDTLARIAEAR----QLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL 463 (549)
T ss_pred CcCCHHHHHHHHHHH----hCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHH
Confidence 999999999986544 3456888886531 34 45699999988899999999999999999999999999999
Q ss_pred HhcCC--C-CcEEEEecCCHHHHHHHHhhc-cee-eEEECC
Q 013901 375 INSGT--K-PLAAYLFTNNKKLKQQFVETV-SAG-GLVIND 410 (434)
Q Consensus 375 ~n~~~--~-gl~~~i~t~d~~~~~~~~~~~-~~g-~v~iN~ 410 (434)
+|++. + ||+++|||+|.+.++++.+++ ++| .++||.
T Consensus 464 an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~ 504 (549)
T cd07127 464 ARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINL 504 (549)
T ss_pred HHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcC
Confidence 99973 4 699999999999999999984 444 888884
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-71 Score=548.52 Aligned_cols=371 Identities=15% Similarity=0.181 Sum_probs=320.2
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH-HHHHHHHHHHhhc
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT-SIKSALKELKHWM 97 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~-~~~~~~~~~~~~~ 97 (434)
++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++ .++++... ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999987546766666 55555431 111
Q ss_pred cccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH----hh-
Q 013901 98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY- 172 (434)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~----~a- 172 (434)
+. .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++
T Consensus 79 g~--~~---~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 GV--IE---EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred ee--ec---cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 10 00 1113456789999999999999999999999999999999999999999999999999888875 55
Q ss_pred cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHH
Q 013901 173 MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250 (434)
Q Consensus 173 lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~ 250 (434)
+|+|++|++++ +.+.+..|++|+ +|.|.||||+.++ +.++++++|+++|+|||||+||++|||++.|++.+++|
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999998 567888999997 9999999999865 44566789999999999999999999999999999999
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcc-------cCCCC-C-CCCcccccCCHHHHHHHHHHHHHhh-hC
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-------YGKNP-L-ESKDLSRIVNSNHFARLSKLLDDDK-VS 320 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~p-~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~ 320 (434)
+| +|+||.|+++++||||+++||+|+++|+++...+ +++++ + +++.+||+++..+.+++.+++..+. .+
T Consensus 230 ~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~g 308 (436)
T cd07122 230 KT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPED 308 (436)
T ss_pred hh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCC
Confidence 99 9999999999999999999999999999998876 67777 3 3668999998888877776655442 34
Q ss_pred CeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcC----CCCcEEEEecCCHHHHHH
Q 013901 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 321 ~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~i~t~d~~~~~~ 396 (434)
+++++|+ +.+++++|+++ +|.||||++|++|+|++||++++|++ ++||++||||+|.+++++
T Consensus 309 a~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~ 374 (436)
T cd07122 309 TKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEE 374 (436)
T ss_pred CeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence 4555443 45778899976 56799999999999999999999997 899999999999999999
Q ss_pred HHhhcceeeEEECCCchhh
Q 013901 397 FVETVSAGGLVINDTAVHV 415 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~ 415 (434)
+++++++|.||||+++.+.
T Consensus 375 ~~~~l~aG~V~IN~~~~~~ 393 (436)
T cd07122 375 FALRMPVSRILVNTPSSLG 393 (436)
T ss_pred HHhhCCceEEEEeCCcccc
Confidence 9999999999999887644
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-70 Score=549.58 Aligned_cols=378 Identities=17% Similarity=0.185 Sum_probs=330.2
Q ss_pred cCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHH
Q 013901 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK 91 (434)
Q Consensus 12 ~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~ 91 (434)
.+.+.+++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..+...+...+.+++.
T Consensus 3 ~~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~ 82 (488)
T TIGR02518 3 DLYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIK 82 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHh
Confidence 46788899999999999999999999999999999999999999999999999999999988764333344455544443
Q ss_pred HHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHH---
Q 013901 92 ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--- 168 (434)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~--- 168 (434)
..+. .+ ......+...+.+++|+|||++|.|||||+....+++++||++||+||+|||+.+|.++..++++
T Consensus 83 ~~~~-~G-----~~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~ 156 (488)
T TIGR02518 83 DMKT-IG-----ILSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRK 156 (488)
T ss_pred hCcc-cc-----eecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHH
Confidence 2211 11 00111234567899999999999999999999999999999999999999999999999985555
Q ss_pred -HHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHH
Q 013901 169 -VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVAC 244 (434)
Q Consensus 169 -~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa 244 (434)
+.++ +|+|+||++++ +.+.+..|++|+ +|.|+||||+..+ +.++.+++|+++|+|||+|+||++|||++.|+
T Consensus 157 ~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa 232 (488)
T TIGR02518 157 AAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAV 232 (488)
T ss_pred HHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHH
Confidence 4676 99999999998 678889999997 9999999999965 44445679999999999999999999999999
Q ss_pred HHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHH-------HhcccCCCC-C-CCCcccccCCHHHHHHHHHHHH
Q 013901 245 RRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE-------LENFYGKNP-L-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 245 ~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~p-~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+.+++|+| +|+||.|++.++||||+++|++|+++|+++ .+.+++|+| . +.+++||+++.++++++.++++
T Consensus 233 ~~iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~ 311 (488)
T TIGR02518 233 RDIIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAG 311 (488)
T ss_pred HHHHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhc
Confidence 99999999 999999999999999999999999999998 888999996 4 5789999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhc----CCCCcEEEEecCC
Q 013901 316 DDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLAAYLFTNN 390 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~i~t~d 390 (434)
++. +|+++++||.. .+++++++ .+|.||||++|++|+|++|||+++|+ +++||+++|||+|
T Consensus 312 ~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d 377 (488)
T TIGR02518 312 LTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN 377 (488)
T ss_pred cccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence 984 78899999853 24667775 79999999999999999999999887 6999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchh
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVH 414 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~ 414 (434)
.+++++|++++++|+|+||++..+
T Consensus 378 ~~~a~~f~~~i~ag~V~VN~~~~~ 401 (488)
T TIGR02518 378 KDIVREFALKKPVSRMLVNTGGSL 401 (488)
T ss_pred HHHHHHHHHhCCeeEEEEcCCCcc
Confidence 999999999999999999976544
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=522.72 Aligned_cols=364 Identities=16% Similarity=0.174 Sum_probs=303.5
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHHH
Q 013901 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKT 84 (434)
Q Consensus 16 ~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ei~~~~~ 84 (434)
..+++++++.|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999998887774 34432 46677777
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+.+.. +.. .+......+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.+
T Consensus 83 ~~~~~a~~~~~~-g~~-~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~ 158 (417)
T PRK00197 83 GLRQVAALPDPV-GEV-LDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA 158 (417)
T ss_pred HHHHHhhcCCCc-ccc-ccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence 777666544321 111 11100011235688999999999999985 4 6788899999999999999999999999999
Q ss_pred HHHHH----Hhh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 165 l~~~~----~~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
+++++ .++ +|+|++|++++ +.+ .+..|..|+ +|.|.||||+.+|+.+.+.+ +||+++|+|||||+||++
T Consensus 159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~ 235 (417)
T PRK00197 159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDE 235 (417)
T ss_pred HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeC
Confidence 98886 466 99999999996 544 556677776 99999999999999999865 599999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
|||++.|++.+++++| .|+| .|++++|+|||+++|++|+++|++++++++++
T Consensus 236 dAdl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------- 287 (417)
T PRK00197 236 SADLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-------------------------- 287 (417)
T ss_pred CCCHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe--------------------------
Confidence 9999999999999999 9999 99999999999999999999999999887532
Q ss_pred hhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 317 DKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 317 a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
++ ||... .+ | .|||+ +++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++
T Consensus 288 ------~~-~~~~~-~~-~-~PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~ 354 (417)
T PRK00197 288 ------LR-GDEAA-LA-L-LPDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER 354 (417)
T ss_pred ------Ee-cCHHH-HH-h-hcccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 11 11110 11 2 29998 4689999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhhhh-h-hhhhhcCCC
Q 013901 397 FVETVSAGGLVINDTAVHVIM-L-ALLKNHTLL 427 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~~~-~-~~~~~~~~~ 427 (434)
+++++++|+|+||+++.+... | +..++||+|
T Consensus 355 ~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g 387 (417)
T PRK00197 355 FLNEVDSAAVYVNASTRFTDGGEFGLGAEIGIS 387 (417)
T ss_pred HHHhCCeeEEEEeCCCccCCCCccccchhheee
Confidence 999999999999987654321 2 556777777
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-67 Score=518.98 Aligned_cols=358 Identities=18% Similarity=0.222 Sum_probs=297.3
Q ss_pred HHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCch----hhhH-------HHHHHHHHHHHHH
Q 013901 21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSI-------YEVALLKTSIKSA 89 (434)
Q Consensus 21 ~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ei~~~~~~~~~~ 89 (434)
..+++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777766643 3332 3666666666666
Q ss_pred HHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH
Q 013901 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~ 169 (434)
+...+. .+.. .+......+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+++++
T Consensus 82 a~~~~~-~g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDP-VGEV-LRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCC-Cccc-ccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 543221 1111 1110001123467899999999999996 55 678899999999999999999999999999999988
Q ss_pred H----hh-cCCCcEEEEeC-Ch-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 170 G----EY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 170 ~----~a-lp~g~v~~i~~-~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
. ++ +|+|++|++++ +. ..+..|..|+ +|.|.||||+.+|+.+.+.+ ++|+++|+|||||+||++|||++
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 7 56 99999999998 44 4566677787 99999999999999999877 59999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCC
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 321 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~ 321 (434)
.|++.+++++| .|+| .|++++|||||+++|++|+++|++++.++ |+
T Consensus 235 ~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------ga 280 (406)
T cd07079 235 MAVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------GV 280 (406)
T ss_pred HHHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC--------------------------------CC
Confidence 99999999999 9999 99999999999999999999999987652 33
Q ss_pred eeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q 013901 322 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 401 (434)
Q Consensus 322 ~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~ 401 (434)
+++ ||... ..|++|| ++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++
T Consensus 281 ~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~ 353 (406)
T cd07079 281 ELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV 353 (406)
T ss_pred EEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC
Confidence 433 33221 1377888 7899999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEECCCchhhh-hh-hhhhhcCC
Q 013901 402 SAGGLVINDTAVHVI-ML-ALLKNHTL 426 (434)
Q Consensus 402 ~~g~v~iN~~~~~~~-~~-~~~~~~~~ 426 (434)
++|.|+||+++.+.. .| +..+++|+
T Consensus 354 ~~G~v~iN~~~~~~~~~pfg~~~~sG~ 380 (406)
T cd07079 354 DSAAVYVNASTRFTDGGEFGLGAEIGI 380 (406)
T ss_pred CeeEEEEeCCCcccCCCccccceeeee
Confidence 999999998765432 23 23346676
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-66 Score=552.57 Aligned_cols=379 Identities=17% Similarity=0.202 Sum_probs=326.1
Q ss_pred hhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHH
Q 013901 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (434)
Q Consensus 8 ~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~ 87 (434)
-+++...+.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++..++..+..
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~--- 79 (862)
T PRK13805 3 KEEMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASE--- 79 (862)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH---
Confidence 35677889999999999999999999999999999999999999999999999999999999998876323322222
Q ss_pred HHHHHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHH
Q 013901 88 SALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (434)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~ 166 (434)
....++......+.. .......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus 80 ----~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 ----YIYNSYKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred ----HHHHHhcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 222222211111111 112345678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh----h-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 167 KLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 167 ~~~~~----a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+++.+ + +|+|+||++++ +.+.+..|++|+ +|.|.||||+..+ +.++++++|+++|+|||+|+||++|||
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dAD 231 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTAD 231 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCC
Confidence 98864 4 99999999998 677889999997 9999999999864 455678899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (434)
++.|++.|++|+| +|+||.|+++++||||++++++|+++|+++ .+|++++++++++.++++++..
T Consensus 232 l~~Aa~~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~--------------g~~l~~~~~~~~v~~~i~~a~~ 296 (862)
T PRK13805 232 IKRAVNDILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASH--------------GAYFLNKKELKKLEKFIFGKEN 296 (862)
T ss_pred HHHHHHHHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHh--------------CCeeCCHHHHHHHHHHHhhccC
Confidence 9999999999999 999999999999999999999999999887 2589999999999999998754
Q ss_pred CC-e-eeecCccC----CCCcccccEE------EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhc----CCCCcE
Q 013901 320 SG-K-IVHGGERD----KNKLRIAPTL------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLA 383 (434)
Q Consensus 320 ~~-~-v~~gg~~~----~~~~~~~Ptv------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~ 383 (434)
++ + .++||... ..|+++.||+ +.+++++|++++ |.||||++|++|+|++|||+++|+ +++||+
T Consensus 297 ~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~ 375 (862)
T PRK13805 297 GALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHT 375 (862)
T ss_pred CCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcE
Confidence 33 2 24566431 2488899987 667889999776 799999999999999999999988 589999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEECCCch
Q 013901 384 AYLFTNNKKLKQQFVETVSAGGLVINDTAV 413 (434)
Q Consensus 384 ~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~ 413 (434)
++|||+|.+++++|++++++|+|+||.++.
T Consensus 376 ~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~ 405 (862)
T PRK13805 376 AVIYTNDDELIKEFGLRMKACRILVNTPSS 405 (862)
T ss_pred EEEECCCHHHHHHHHhhCCccEEEEeCCcc
Confidence 999999999999999999999999998763
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=534.88 Aligned_cols=361 Identities=21% Similarity=0.192 Sum_probs=311.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HhhcC--CCchhhh---HHHHHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL------RQDLD--KPELESS---IYEVALLKTSI 86 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a~---~~ei~~~~~~~ 86 (434)
.+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++ ++|+| ||+.++. ..|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999996 77999 8877653 35999999999
Q ss_pred HHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHH
Q 013901 87 KSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (434)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~ 166 (434)
++++.. ....+... +......+...+++++|+|||++|+||| |+... +++++||++||+||+|||+.+|.++..++
T Consensus 375 ~~~a~~-~~~~g~~~-~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 375 RQLADM-EDPIGRVL-KRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHhcC-ccccCccc-cccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 998876 33332211 1000011233578999999999999999 99998 99999999999999999999999999999
Q ss_pred HHHHhhcCCCc----EEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 167 KLVGEYMDLSS----IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 167 ~~~~~alp~g~----v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
+++.+++|+|+ +|+++|+.+.+..|..|+ +|.|.||||+. .+.+.+++++||+++|+|||+|+||++|||++
T Consensus 451 ~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~DADld 527 (718)
T PLN02418 451 KVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDKSADMD 527 (718)
T ss_pred HHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeCCCCHH
Confidence 99999999996 999998666788898887 99999999996 45555666789999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hC
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VS 320 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~ 320 (434)
.|++.+++++| .| ||.|++.+|+|||+++||+ | .+.++|+++. +|
T Consensus 528 ~A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~G 573 (718)
T PLN02418 528 MAKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSAG 573 (718)
T ss_pred HHHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHCC
Confidence 99999999999 88 9999999999999999987 1 2478888885 57
Q ss_pred CeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q 013901 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400 (434)
Q Consensus 321 ~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~ 400 (434)
+++ +||.... | ++. + ++|++++||+|||+++|.+|+|++|||+++|+++|||+++|||+|.+++.+|+++
T Consensus 574 a~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~ 643 (718)
T PLN02418 574 VTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQ 643 (718)
T ss_pred CEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHh
Confidence 788 7876432 3 233 4 7899999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCchhhh--hhhhhhhcCC--CCc
Q 013901 401 VSAGGLVINDTAVHVI--MLALLKNHTL--LRS 429 (434)
Q Consensus 401 ~~~g~v~iN~~~~~~~--~~~~~~~~~~--~~~ 429 (434)
+++|.||||+++.+.. .-+..|+||+ ||+
T Consensus 644 l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~ 676 (718)
T PLN02418 644 VDSAAVFHNASTRFSDGARFGLGAEVGISTGRI 676 (718)
T ss_pred CCeeEEEEeCCCCCCCCCCCCCcccccccCCcC
Confidence 9999999998765332 2377799999 887
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-64 Score=480.33 Aligned_cols=392 Identities=21% Similarity=0.333 Sum_probs=359.7
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
...+.++..++..+++++++.|..|+..|+.+|..+|..+|++++++++.+..+|..++++|.||....+. .|+..+++
T Consensus 138 ~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREAVD 216 (769)
T COG4230 138 DDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVD 216 (769)
T ss_pred hHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHHHH
Confidence 34578889999999999999999999999999999999999999999999999999999999999999995 89999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.|+||+.+.++-++. ..++|+|.+.||+|||||+..+..+++.||++||+|+-||.+++|+.+..
T Consensus 217 FlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~ 281 (769)
T COG4230 217 FLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQ 281 (769)
T ss_pred HHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHH
Confidence 999999988752221 34689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCC
Q 013901 165 LAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~da 238 (434)
-.+++.++ +|++++|+++|+. ..+..|..++ ++.|+||||+++++.+.++.+++ ..|++.|.||.|.+||+++|
T Consensus 282 aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsA 361 (769)
T COG4230 282 AVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA 361 (769)
T ss_pred HHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechh
Confidence 99999999 9999999999966 4788899886 99999999999999999988873 47999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
--|+++..++.|+| ..+||+|++.+.+++++++.|..++.|+..+.++++|+|+. ++|+||+|+.+..+.+.++|+..
T Consensus 362 L~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~m 440 (769)
T COG4230 362 LAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTM 440 (769)
T ss_pred hHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999986 89999999999999999999988
Q ss_pred hhCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeec--CCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 KVSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~--~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+..++.++.-..+ ..|+|+.||++.-...+. ++.|+||||+.|++| +++++.|+-+|.++||||.+|||+-++
T Consensus 441 r~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~e--L~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRide 518 (769)
T COG4230 441 RSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDE--LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDE 518 (769)
T ss_pred HhcccchhhccCCCccCCceeeCceeEEcCCHHH--HHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHH
Confidence 7777766654432 469999999986433332 688999999999999 479999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV 415 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~ 415 (434)
.+.++.+++++|.+|||...+..
T Consensus 519 ti~~v~~~~~aGNlYVNRN~vGA 541 (769)
T COG4230 519 TIAHVTERAHAGNLYVNRNIVGA 541 (769)
T ss_pred HHHHHHhhccccceEeeccceee
Confidence 99999999999999999865543
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-64 Score=492.68 Aligned_cols=345 Identities=18% Similarity=0.190 Sum_probs=290.8
Q ss_pred HHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHhhcCCCc------hhhhHHHHHHHHHHHHHHHHHH
Q 013901 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA------LRQDLDKPE------LESSIYEVALLKTSIKSALKEL 93 (434)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~~ei~~~~~~~~~~~~~~ 93 (434)
|++||+.|+++|.++|.++|+++++.|++++++|+++ ++.|+|||. .+++ .|+..+++.++++++..
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence 5788999999999999999999999999999999999 999999994 2344 58999999999888766
Q ss_pred HhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH----
Q 013901 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---- 169 (434)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~---- 169 (434)
+.+ +. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++
T Consensus 80 ~~~-g~-~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-GK-VIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-cc-cccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 432 21 111100112345688999999999999996 6 668889999999999999999999999999999994
Q ss_pred Hhh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHH
Q 013901 170 GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACR 245 (434)
Q Consensus 170 ~~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~ 245 (434)
.++ +|+|++|++++ +.+ .+..|..|+ +|.|.||||+.+++.+.+.. .+|+++|+|||||+||++|||++.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 477 99999999997 544 567778786 99999999999999887753 489999999999999999999999999
Q ss_pred HHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeee
Q 013901 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 325 (434)
Q Consensus 246 ~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~ 325 (434)
.+++|+| .+ ||.|++++|+|||+++|++|+++|++++.++.. .+++ .+.+.+++..
T Consensus 233 ~iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~--------- 288 (398)
T TIGR00407 233 VIVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL--------- 288 (398)
T ss_pred HHHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc---------
Confidence 9999999 75 999999999999999999999999999988643 1222 1334444331
Q ss_pred cCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceee
Q 013901 326 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405 (434)
Q Consensus 326 gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~ 405 (434)
|| ||++ + .++.+++||+||||++|++|+|++||++++|++++||+++|||+|.+++++|++++++|.
T Consensus 289 g~----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~ 355 (398)
T TIGR00407 289 GP----------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA 355 (398)
T ss_pred cC----------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence 11 2544 2 337889999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCchhh
Q 013901 406 LVINDTAVHV 415 (434)
Q Consensus 406 v~iN~~~~~~ 415 (434)
|+||+++.+.
T Consensus 356 v~iN~~~~~~ 365 (398)
T TIGR00407 356 VYHNASTRFT 365 (398)
T ss_pred EEEeCCCCcC
Confidence 9999976543
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-63 Score=490.80 Aligned_cols=354 Identities=17% Similarity=0.147 Sum_probs=305.3
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhh----------HHHHHHHHHHHHHHHHHH
Q 013901 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS----------IYEVALLKTSIKSALKEL 93 (434)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~----------~~ei~~~~~~~~~~~~~~ 93 (434)
++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||++.+.. ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 136777777777766543
Q ss_pred HhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-
Q 013901 94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172 (434)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a- 172 (434)
....... .. .....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~~~~~~-----~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDVL-----LP-DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred CcccceE-----ec-CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 3222111 01 12357899999999999999999999 9999999999999999999999999999999998874
Q ss_pred ---cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHH
Q 013901 173 ---MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 247 (434)
Q Consensus 173 ---lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i 247 (434)
+|+++++++++ +.+.+..|+.|+ +|.|+||||+.+++.+.+.+. .+|+++|+||++|+||++|||++.|++.+
T Consensus 154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~ 231 (397)
T cd07077 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSV 231 (397)
T ss_pred hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHH
Confidence 89999999987 667888999997 999999999999999988774 68999999999999999999999999999
Q ss_pred HHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecC
Q 013901 248 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG 327 (434)
Q Consensus 248 ~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg 327 (434)
++++| +| ||.|+++++||||++++++|+++|++++.+ .|++++.||
T Consensus 232 ~~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~~g~ 277 (397)
T cd07077 232 HDSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVPQET 277 (397)
T ss_pred HHhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcCCCc
Confidence 99999 99 999999999999999999999999998654 345666665
Q ss_pred ccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcce
Q 013901 328 ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE----DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403 (434)
Q Consensus 328 ~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~ 403 (434)
.++|+.|| ++|.+.++|+||||++|++|+|++ +|++++|++++||+++|||+|.+.++++++++++
T Consensus 278 ----~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 278 ----KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred ----eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 24566675 788889999999999999999996 6667889999999999999999999999999999
Q ss_pred eeEEECCCchhhh----hhhhhh--hcCCCCcc
Q 013901 404 GGLVINDTAVHVI----MLALLK--NHTLLRSC 430 (434)
Q Consensus 404 g~v~iN~~~~~~~----~~~~~~--~~~~~~~~ 430 (434)
|+|+||+++.+.. ..+..+ +||+|++.
T Consensus 348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~ 380 (397)
T cd07077 348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIF 380 (397)
T ss_pred EEEEEeCCccCCCccccCCCcceEEEccccCCC
Confidence 9999999887763 123445 78888764
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-61 Score=476.17 Aligned_cols=343 Identities=33% Similarity=0.494 Sum_probs=315.5
Q ss_pred HHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 013901 25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT 104 (434)
Q Consensus 25 ~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (434)
+|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..+++.++++++.++.+.+.....
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~~- 79 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPS- 79 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc-
Confidence 688999999999999999999999999999999999999999999999886 699999999999999888765522111
Q ss_pred ccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhh-cCCCcEEEEeC
Q 013901 105 SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG 183 (434)
Q Consensus 105 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~a-lp~g~v~~i~~ 183 (434)
...+..++++++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++
T Consensus 80 --~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~ 157 (367)
T cd06534 80 --PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPG 157 (367)
T ss_pred --cCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEc
Confidence 123567889999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred Ch-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccC
Q 013901 184 AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 261 (434)
Q Consensus 184 ~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~ 261 (434)
+. +....|+.|+ +|.|+||||+++++.+.+.++++++|+++|+||+|++||++|+|++.|++.+++++| .++||.|+
T Consensus 158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C~ 236 (367)
T cd06534 158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQICT 236 (367)
T ss_pred CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCC
Confidence 54 4788899887 899999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEEE
Q 013901 262 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL 341 (434)
Q Consensus 262 ~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~ 341 (434)
++++||||++++++|+++|+ ||+
T Consensus 237 s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------tl~ 259 (367)
T cd06534 237 AASRLLVHESIYDEFVEKLV---------------------------------------------------------TVL 259 (367)
T ss_pred CCcEEEEcHHHHHHHHHhhc---------------------------------------------------------eee
Confidence 99999999999999998886 667
Q ss_pred EeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhh---hhh
Q 013901 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV---IML 418 (434)
Q Consensus 342 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~---~~~ 418 (434)
.+++++++++++|+|||+++|++|++++|+++++|++++||+++|||+|.+.+++++.++++|+|+||+++++. ..-
T Consensus 260 ~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pf 339 (367)
T cd06534 260 VDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPF 339 (367)
T ss_pred eCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCC
Confidence 77888999999999999999999999999999999999999999999999999999999999999999988773 112
Q ss_pred hhhhhcCCCCc
Q 013901 419 ALLKNHTLLRS 429 (434)
Q Consensus 419 ~~~~~~~~~~~ 429 (434)
+..+.||+|++
T Consensus 340 gg~~~sG~g~~ 350 (367)
T cd06534 340 GGVKNSGIGRE 350 (367)
T ss_pred CCcccCccCCC
Confidence 55677788876
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=449.80 Aligned_cols=407 Identities=19% Similarity=0.291 Sum_probs=369.3
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHH-hcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+..+|++..++.+++++|+++|.+|++.|..+|..+|.+++++.|+++. +++-+|....+.-.||...++..+-+...+
T Consensus 84 q~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLi 163 (561)
T KOG2455|consen 84 QHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELI 163 (561)
T ss_pred hhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999 888999989999999999998766577778
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.+|+.++.+..+...+.... ..+..+..+++|+ |.|+.|+|+||.....-...+||| +||+|++|||..+.++.
T Consensus 164 df~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lss 239 (561)
T KOG2455|consen 164 DFFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSS 239 (561)
T ss_pred HHHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHH
Confidence 888888888888766554332 3456788999999 999999999998887777788887 99999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc------cCceEEecCCCCceE
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVV 233 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~------~~p~~~e~gG~~~~i 233 (434)
..+.++|+++ +|+|++|+++++ ...++.+..++ ...+-||||..+-+.+.+..+.+ .-+++.|+||||.-+
T Consensus 240 Yii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHf 319 (561)
T KOG2455|consen 240 YIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHF 319 (561)
T ss_pred HHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEE
Confidence 9999999999 999999999995 45678888886 99999999999999999888764 468999999999999
Q ss_pred EcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CC-CCcccccCCHHHHHHHH
Q 013901 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLS 311 (434)
Q Consensus 234 v~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~ 311 (434)
|+++||++.++...++++| .++||.|++.+|+||+++.++.+.+.|.+.-+++++|+| .+ ++.+||+++.+.+.|++
T Consensus 320 VH~SA~VesvV~~TvrsAf-ey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~ 398 (561)
T KOG2455|consen 320 VHASADVESVVSSTVRSAF-EYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLK 398 (561)
T ss_pred eccccchHHHHHHHHHHHH-hhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999998 45 78999999999999999
Q ss_pred HHHHHhhhCC--eeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhc-CCCCcEEE
Q 013901 312 KLLDDDKVSG--KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINS-GTKPLAAY 385 (434)
Q Consensus 312 ~~i~~a~~~~--~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~-~~~gl~~~ 385 (434)
++|+.|+.+. +|++||+.+ ..|+|+.|||+..-+|.++++.||+|||||+|+.|+ +++|+++++.+ ++|+|+.+
T Consensus 399 k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGa 478 (561)
T KOG2455|consen 399 KVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGA 478 (561)
T ss_pred HHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccc
Confidence 9999997654 899999985 469999999999999999999999999999999996 48999999877 89999999
Q ss_pred EecCCHHHHHHHHhhcc--eeeEEECCCchhhh
Q 013901 386 LFTNNKKLKQQFVETVS--AGGLVINDTAVHVI 416 (434)
Q Consensus 386 i~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~ 416 (434)
||+.|.+.+.+..++++ +|..+||+-.+...
T Consensus 479 iFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsv 511 (561)
T KOG2455|consen 479 IFAQDREVVLHALDVLRMAAGNFYINDKCTGSV 511 (561)
T ss_pred cccccHHHHHHHHHHHHhhhcceEEccccccce
Confidence 99999999999999777 89999999666543
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-61 Score=501.12 Aligned_cols=361 Identities=19% Similarity=0.204 Sum_probs=292.9
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhh--------HHHHHHHHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS--------IYEVALLKTSIKSA 89 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~--------~~ei~~~~~~~~~~ 89 (434)
.++..+++|++||+.|+.+|.++|.++|+++++.|++++++|+ .++||++.+++ ..|+.....++.++
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 3888899999999999999999999999999999999999997 46666665443 23444444555555
Q ss_pred HHHHHhhcccccccc-----ccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 90 LKELKHWMTPEKAKT-----SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 90 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
++.++.+.+.....+ .....+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.++..
T Consensus 363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~ 440 (715)
T TIGR01092 363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAI 440 (715)
T ss_pred HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHH
Confidence 555555443211100 00011223567899999999999999 9998 6899999999999999999999999999
Q ss_pred HHHHHHhhcCCC----cEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 165 LAKLVGEYMDLS----SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 165 l~~~~~~alp~g----~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+++++.+++|+| +++++++..+.+..|..|+ +|.|+||||+.+|+.+++.+. +|+++|+|||||+||++|||
T Consensus 441 l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dAD 517 (715)
T TIGR01092 441 LHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSAS 517 (715)
T ss_pred HHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCC
Confidence 999999999987 6899986445566777776 999999999999999998874 99999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
++.|++.++.++| ++||.|++++|||||++++++ | .+.++++++.
T Consensus 518 l~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~~~~ 563 (715)
T TIGR01092 518 VDMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDMLRT 563 (715)
T ss_pred HHHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------h--------hHHHHHHHHHH
Confidence 9999877777766 559999999999999999985 0 1445566654
Q ss_pred hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 319 ~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
+|+++ +||.... .|+. ..+++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.+++|+
T Consensus 564 ~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~ 635 (715)
T TIGR01092 564 EGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFL 635 (715)
T ss_pred CCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 56676 5875432 2332 13678999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++++|.|+||+++.+. ..| +..+.||+|++
T Consensus 636 ~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~ 668 (715)
T TIGR01092 636 QHVDSAAVFHNASTRFSDGFRFGLGAEVGISTS 668 (715)
T ss_pred HhCCeeEEEEeCCCCCCCCCCCcCccccccccC
Confidence 99999999999865422 223 66788999965
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-61 Score=449.89 Aligned_cols=405 Identities=20% Similarity=0.269 Sum_probs=357.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
++.+|++++++..+|+++|+++|+.||+ .|++++..+|.+.+.++++++++|+++|+.+.+++.|.-..-+...-+..
T Consensus 446 ~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvgm 525 (881)
T KOG2452|consen 446 DGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGM 525 (881)
T ss_pred CCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcCc
Confidence 6788999999999999999999999997 49999999999999999999999999999999999996655554456777
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++|++.+.++.-+....-...........++++|+|||++|.|||||+..+.|+.+.+|++. ++
T Consensus 526 si~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~---~~--------- 593 (881)
T KOG2452|consen 526 SIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ---VL--------- 593 (881)
T ss_pred eehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH---Hh---------
Confidence 889999999998876443221111111224567899999999999999999999999999998762 11
Q ss_pred HHHHHHHHHhhcCCCcEEEEeCChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEYMDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~alp~g~v~~i~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~~da 238 (434)
.+.+ -.|++|+++|+.+ .++.|..|| +..|-||||++.|+.+++.++. +.|++.+|+||++|+||+.|+
T Consensus 594 --k~~e------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~ 665 (881)
T KOG2452|consen 594 --KFAE------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADC 665 (881)
T ss_pred --hhhh------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecC
Confidence 2222 2589999999665 578899997 9999999999999999999885 579999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|+++|++.-.-+.| ++-|..|++..|+||.++|.|+|+.++.++.+++.+|+|++ +++.||--...++.++-+|++.+
T Consensus 666 dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~ 744 (881)
T KOG2452|consen 666 DLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHG 744 (881)
T ss_pred cHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999965 89999999999999999999988
Q ss_pred h-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecC--CHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 318 K-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 318 ~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
. .|+++.|||.. +-.|.|++|||++++...|.+..||-||||+.|.+|+ |+++++..+|.+++||++++||+|...
T Consensus 745 v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k 824 (881)
T KOG2452|consen 745 VKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINK 824 (881)
T ss_pred hccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccch
Confidence 4 67899999986 4579999999999999999999999999999999996 589999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCc-hhhhhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTA-VHVIML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~-~~~~~~-~~~~~~~~~~~ 429 (434)
..++++.+++|+|++|.+. +.+..| +.+|+||+|.+
T Consensus 825 ~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd 862 (881)
T KOG2452|consen 825 ALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKD 862 (881)
T ss_pred hhhhhhhhccceEEEeeccccccccCCCCccccccccc
Confidence 9999999999999999865 444444 88999999987
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-59 Score=423.53 Aligned_cols=420 Identities=18% Similarity=0.250 Sum_probs=377.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+-++|+.+-.++.+|.+.+++.|++|++.|-..|...|.++++++.+.|+...+-|-.++++|+||-..+.. +|+..-+
T Consensus 42 nn~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyv 120 (507)
T KOG2453|consen 42 NNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYV 120 (507)
T ss_pred CCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHH
Confidence 668899999999999999999999999999999999999999999999999999999999999999999985 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++|+....+.+-++. .+.. ..+.--...+.|+|+|++|+.+|||....-|.-..++.+||+|++||.+.+|+++.
T Consensus 121 dicdyavglsr~l~g~i-~pse--rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTi 197 (507)
T KOG2453|consen 121 DICDYAVGLSRSLEGKI-FPSE--RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTI 197 (507)
T ss_pred HHHHHhhhhhhhhCCcc-cCCC--CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHH
Confidence 99999888777654432 1111 11223345788999999999999999999998889999999999999999999887
Q ss_pred HHHHHHHhh-----cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-----lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
...+++.+. +|++......|..+.+.++.+.. +..+.||||+..++.+.+...+++.+..+|+||+|+.||.+|
T Consensus 198 AvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~ed 277 (507)
T KOG2453|consen 198 AVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNED 277 (507)
T ss_pred HHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecc
Confidence 776666554 78888888888889999988775 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||+..++...++++. ..+||+|+..+|++||+++||+++++|+....++.+|+|.+ .+-+||+.+++...+++.-+++
T Consensus 278 adl~lvvps~lfaav-gtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~vee 356 (507)
T KOG2453|consen 278 ADLNLVVPSTLFAAV-GTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEE 356 (507)
T ss_pred ccceeeehHHHHHHh-cccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999976 7899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
++ +|+++++||+. +.+|+|++|||++ ..+|.++..+|.|.||+.|.+|.+++||+.+-|+.+.||+.+|||+|...+
T Consensus 357 ak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~ni 435 (507)
T KOG2453|consen 357 AKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNI 435 (507)
T ss_pred HHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHH
Confidence 95 78999999997 5679999999997 899999999999999999999999999999999999999999999999988
Q ss_pred HHHHhh--cceeeEEECCCchhhhhhhhh---hhcCCCCc
Q 013901 395 QQFVET--VSAGGLVINDTAVHVIMLALL---KNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~--~~~g~v~iN~~~~~~~~~~~~---~~~~~~~~ 429 (434)
-+...- .+.|.|.+|=++-.....+.+ |+.|=||+
T Consensus 436 frw~gpkgsdcgivnvniptsgaeiggafggek~tgggre 475 (507)
T KOG2453|consen 436 FRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 475 (507)
T ss_pred HhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcc
Confidence 888764 457999999777666555443 77777776
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=290.54 Aligned_cols=362 Identities=18% Similarity=0.164 Sum_probs=250.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHH----hcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHH-HH
Q 013901 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN----EREPDIVDALRQDLDKPELESSIYEVALLKTSIKS-AL 90 (434)
Q Consensus 16 ~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~-~~ 90 (434)
..++++..+..+...+....++.++..+++.++++.+. ..+.+..+.+...+|.+...-. ..+......++. .+
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~~l 82 (422)
T cd07080 4 APDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRRENL 82 (422)
T ss_pred HHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHHHH
Confidence 34455555555555555666777777777777776664 2344555556666666543322 122222222210 00
Q ss_pred -HHHHhhcc-ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHH
Q 013901 91 -KELKHWMT-PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL 168 (434)
Q Consensus 91 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~ 168 (434)
..+...++ ...+..... .+...+++++|+|++++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.++
T Consensus 83 ~~~l~~el~~~~~Ld~w~~-~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~ 160 (422)
T cd07080 83 ERILERELGSPGILDEWVP-PGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRS 160 (422)
T ss_pred HHHHHHhcCCcccccCCcc-CCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHH
Confidence 01111111 111111111 2456688999999999999999999 7899999999999999999999999999999999
Q ss_pred HHhhcCC----CcEEEE--eC-ChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCC-CceEEcCCC--
Q 013901 169 VGEYMDL----SSIRVV--EG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVFDSGI-- 238 (434)
Q Consensus 169 ~~~alp~----g~v~~i--~~-~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~-~~~iv~~da-- 238 (434)
+.+++|+ +.++++ +| +.+....|++++ |.|+||||+++++.+.+.++.+ +.++|+||| +++|+++++
T Consensus 161 l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~ 237 (422)
T cd07080 161 LADVDPNHPLTDSISVVYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALE 237 (422)
T ss_pred HHhcCCCCcccceEEEEEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhc
Confidence 9999988 778888 45 345778888888 9999999999999999988864 579999999 556666668
Q ss_pred --CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCc---HHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHH
Q 013901 239 --NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY---APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 239 --d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~ 313 (434)
|++.+++.++++++ .|+||.|+|+++||||+++ +++|.++|.++++++....|.. +. +.+...++...
T Consensus 238 ~~dl~~aa~~~a~~~~-~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~-----~~-~~~~~~~~~~~ 310 (422)
T cd07080 238 SEKLAEVADALAEDIC-RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL-----SL-SAAESAKIARA 310 (422)
T ss_pred cccHHHHHHHHHHHHH-HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC-----CC-CHHHHHHHHHH
Confidence 99999999999999 9999999999999999999 9999999999999886444321 11 23333333332
Q ss_pred HHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 314 LDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 314 i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
-..+. .+.+.... .+.++ +|+...... + .....+=.+.|+++++++|++..++. +--|+++|..+.+
T Consensus 311 r~~~~~~~~~~~~~---~~~~~----~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~ 378 (422)
T cd07080 311 RLEAEFYELKGGVS---RDLGW----TVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAE 378 (422)
T ss_pred HHHHHHHHHhcCCC---CCCCe----EEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhh
Confidence 22221 11111111 11222 444443322 1 22566678899999999999999986 6679999998888
Q ss_pred HHHHHHhhcce
Q 013901 393 LKQQFVETVSA 403 (434)
Q Consensus 393 ~~~~~~~~~~~ 403 (434)
. .++++++..
T Consensus 379 ~-~~~~~~l~~ 388 (422)
T cd07080 379 L-AELADALAA 388 (422)
T ss_pred H-HHHHHHHHH
Confidence 7 677776663
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=271.31 Aligned_cols=357 Identities=18% Similarity=0.209 Sum_probs=287.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcC----CCchhhhHHHHHHHHHHHHHHHHH
Q 013901 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLD----KPELESSIYEVALLKTSIKSALKE 92 (434)
Q Consensus 17 ~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~G----k~~~~a~~~ei~~~~~~~~~~~~~ 92 (434)
.++.+..++|++|...+..++.++|.+.|..+++.|+.++++|.++..+|.- ..+.++..+.+......++..++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 4577888999999999999999999999999999999999999988877743 234455555666666666666666
Q ss_pred HHhhcc-ccc----cccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHH
Q 013901 93 LKHWMT-PEK----AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (434)
Q Consensus 93 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~ 167 (434)
++.... +.. ........+-..+-++.|+||+++| +..-...++.....+|++||+||||.++.+..+...+.+
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 555432 111 1122223445677889999999999 777777788888999999999999999999999999998
Q ss_pred HHHhh-----cCCCcEEEEeC-ChHhHHHHhcCC--CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 168 LVGEY-----MDLSSIRVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 168 ~~~~a-----lp~g~v~~i~~-~~~~~~~L~~~~--v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+++++ +|++.||+++. +.+....|++.+ +|.|+..||...-+.+.+.+. .||+-.+-|++.++|+++||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 87765 79999999988 678888888764 999999999998888888776 89999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (434)
+|+|.+-++++++ ... -.|++.+.++||+.+.++|+..|.+.+....+-- . .++ ...+++.
T Consensus 238 ld~A~~ii~nAKt-qrP-s~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvel------r---~d~----~~~~~~~---- 298 (417)
T COG0014 238 LDKALKIIVNAKT-QRP-SVCNAAETLLVHRAIAKSFLPKLANALQEAGVEL------R---GDA----EALALLP---- 298 (417)
T ss_pred HHHHHHHHHcccC-CCC-cccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEE------E---cCH----HHHHhcc----
Confidence 9999999999999 544 4899999999999999999999999887542210 0 000 1111111
Q ss_pred CCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 320 ~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
+ .+ .+....-+..|...+++.|..+++++|||+++|+.+.+||-+|.|+|...+++|.+
T Consensus 299 ------~-----~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~ 357 (417)
T COG0014 299 ------D-----AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVN 357 (417)
T ss_pred ------c-----cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHh
Confidence 0 00 11222226789999999999999999999999999999999999999999999999
Q ss_pred hcceeeEEECCCchhhhhh
Q 013901 400 TVSAGGLVINDTAVHVIML 418 (434)
Q Consensus 400 ~~~~g~v~iN~~~~~~~~~ 418 (434)
.+++..|++|.++.|.-..
T Consensus 358 ~VDSAaVyvNASTRFtDG~ 376 (417)
T COG0014 358 EVDSAAVYVNASTRFTDGG 376 (417)
T ss_pred hcchheEEEecccccccCc
Confidence 9999999999999887644
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=212.67 Aligned_cols=348 Identities=23% Similarity=0.245 Sum_probs=258.5
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHH------hhcCCCchhhhHHHHHHHHHHHHHHHHH
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALR------QDLDKPELESSIYEVALLKTSIKSALKE 92 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~------~e~Gk~~~~a~~~ei~~~~~~~~~~~~~ 92 (434)
+++..+.||++++.++.++.++|.++|.++++.|..+..++.++.. ++.| ..++....+...-..+.....-
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCChHHHHHHHHH
Confidence 4566789999999999999999999999999999987777665443 3455 3333333444444444444444
Q ss_pred HHhhccccccccc-----cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHH
Q 013901 93 LKHWMTPEKAKTS-----ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (434)
Q Consensus 93 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~ 167 (434)
++.....+..-+. ....+-.-+....|+||.++| |....-.+......|+++||.+++|....+..+...|.+
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 4433221111000 011233456677899999999 665555666667789999999999999999999999999
Q ss_pred HHHhhc-----CCCcEEEEeCChHhHHHHhcC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 168 LVGEYM-----DLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 168 ~~~~al-----p~g~v~~i~~~~~~~~~L~~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
+.++++ |.+.|++++.. +....|++. + +|.|+..||+...+.+..... .||..+..|.+.++|++|||+
T Consensus 158 ~v~~al~~~~~~~~aV~LV~sR-Eev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~ 233 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTSR-EEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADL 233 (433)
T ss_pred HHHHHhhhccCchhhhhheecH-HHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCH
Confidence 998874 67788999754 444555554 4 999999999999998887665 899999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCc-HHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 319 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~ 319 (434)
++|.+-+..+++ +.--.|++.+.++||++. ...|.+.|...+. .
T Consensus 234 ~kA~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------~ 278 (433)
T KOG4165|consen 234 DKAKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------E 278 (433)
T ss_pred HHHHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------h
Confidence 999999999987 555689999999999983 2344433333222 2
Q ss_pred CCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 320 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 320 ~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
++.-+++|..-..-..+ .++...-++.|.-.-.+++-.+++.++||+.+|..+.+||-.|.|+|.+.+++|..
T Consensus 279 ~gVtl~agpkl~~~l~~-------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~ 351 (433)
T KOG4165|consen 279 EGVTLHAGPKLAALLKF-------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLK 351 (433)
T ss_pred cCeEEecChhHHhhcCc-------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHh
Confidence 23333333321110011 13344457888888999999999999999999999999999999999999999999
Q ss_pred hcceeeEEECCCchhhh
Q 013901 400 TVSAGGLVINDTAVHVI 416 (434)
Q Consensus 400 ~~~~g~v~iN~~~~~~~ 416 (434)
.+++..|++|.++.|.-
T Consensus 352 ~VDSa~vf~NASTRFaD 368 (433)
T KOG4165|consen 352 HVDSACVFHNASTRFAD 368 (433)
T ss_pred ccchhheeecccccccc
Confidence 99999999999888764
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-16 Score=156.19 Aligned_cols=266 Identities=20% Similarity=0.212 Sum_probs=190.2
Q ss_pred ceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCC----CcEEEE--eC-Ch
Q 013901 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL----SSIRVV--EG-AV 185 (434)
Q Consensus 113 ~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~----g~v~~i--~~-~~ 185 (434)
.+.++.|.|++++|.|.|-|...+. .++.+|++||..|+|+|+..+.++..+.+.|.+..|. ..+.++ ++ +.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence 6778999999999999999998555 4677889999999999999999999999999888775 345566 34 34
Q ss_pred HhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCE
Q 013901 186 AETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 265 (434)
Q Consensus 186 ~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~ 265 (434)
+..+.+. ...|.++.+||.++.+.+.+. .+..++.+....-.+-++|..+++++.+++.+.+-.+ ...+|.|.|++.
T Consensus 160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~~-~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCsSp~~ 236 (399)
T PF05893_consen 160 ELEEALS-QQADAVVAWGGDETIRAIRQP-LPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIF-LFDQQACSSPQV 236 (399)
T ss_pred HHHHHHH-HHCCEEEEeCCHHHHHHHHHH-cCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccCCCeE
Confidence 4445554 447999999999999999984 3444677777788888999999999999999999999 999999999999
Q ss_pred EEEe---CCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHH-----hhhCC-eeeecCccCCCCccc
Q 013901 266 IITT---KDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD-----DKVSG-KIVHGGERDKNKLRI 336 (434)
Q Consensus 266 v~V~---~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~-----a~~~~-~v~~gg~~~~~~~~~ 336 (434)
|||. +.-.++|.++|.+++.+....-|.. ..+.+....+....+. +..+. ++. ++.. ..+
T Consensus 237 ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~--~~~-- 305 (399)
T PF05893_consen 237 IFVETGDGDSVEEFAERLAEALERAAERYPRG------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD--NSW-- 305 (399)
T ss_pred EEEECCCcccHHHHHHHHHHHHHHHHHhCCCc------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC--CCE--
Confidence 9999 3456889999888887763322211 1122222222222222 22333 333 2221 111
Q ss_pred ccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh
Q 013901 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399 (434)
Q Consensus 337 ~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 399 (434)
||+..... ......++=.+.|+++++.+|++.+++....=-|++++.... ....+++
T Consensus 306 --~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~~-~~~~~~~ 362 (399)
T PF05893_consen 306 --TVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWSE-RLEELAR 362 (399)
T ss_pred --EEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecChh-hHHHHHH
Confidence 45543221 233455567899999999999999999974324788876544 4555555
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.7e-13 Score=105.06 Aligned_cols=131 Identities=24% Similarity=0.269 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh--hhCCeeeecCccCCCCcccccEEEEeCCCCCC
Q 013901 273 APKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSL 349 (434)
Q Consensus 273 ~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a--~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~ 349 (434)
+..+.+.|+++.+.+++-+-. +.+|. .+...++.++|+.- ..+..+..-|.. .++|..||++. |+|+|.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~ya--~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGYA--EGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeeccc--cCCcccceEEE-ecCCcc
Confidence 467788888888888775544 35565 56667888888753 123344333333 78999999998 999999
Q ss_pred ccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCC
Q 013901 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 411 (434)
Q Consensus 350 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~ 411 (434)
++.||+||||+....-++++|+|..+|+.+||....+||++.+.++.+.+..++|-|.+|-+
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ 141 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVP 141 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999963
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.9e-11 Score=103.50 Aligned_cols=167 Identities=10% Similarity=0.133 Sum_probs=127.8
Q ss_pred CceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHH
Q 013901 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR 309 (434)
Q Consensus 230 ~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~ 309 (434)
.-+||++|.|++.|+..++.+.- .--...+...|+|||++.++|+++++.+++.+.-. +.+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHHH
Confidence 44899999999999999999965 33346688899999999999999999998765311 223334555
Q ss_pred HHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcC--CCCcEEEEe
Q 013901 310 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG--TKPLAAYLF 387 (434)
Q Consensus 310 ~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~~~i~ 387 (434)
..+.++ .-+.+.+.++... ....-.|.++.+.++.. +. +-..+|+++++|++..||++++++. .++ +.+||
T Consensus 73 sl~~i~--~l~~~~I~~~~~~-~~~~aSPilV~d~~h~~--fg-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW 145 (215)
T PF07368_consen 73 SLKKIK--CLNAKTIVADFEN-VPPPASPILVCDFTHSY--FG-DGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIW 145 (215)
T ss_pred HHHHHH--hcCCeEEEecccC-CCCCCCCEEEcCCCHHH--cC-CCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEe
Confidence 555555 3466777773321 22344689988766543 22 2556899999999999999999984 455 99999
Q ss_pred cCCHHHHHHHHhhcceeeEEECCCchhhh
Q 013901 388 TNNKKLKQQFVETVSAGGLVINDTAVHVI 416 (434)
Q Consensus 388 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~ 416 (434)
++..+.+=.++.++....++||.....+.
T Consensus 146 ~ekla~~Yel~~~l~~~~f~iNC~~V~L~ 174 (215)
T PF07368_consen 146 NEKLASAYELAARLPCDTFYINCFNVDLS 174 (215)
T ss_pred CcHHHHHHHHHHhCCCCEEEEEeccCCch
Confidence 99999999999999999999998765553
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.1e-06 Score=93.34 Aligned_cols=103 Identities=19% Similarity=0.135 Sum_probs=79.2
Q ss_pred CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEEEeCChHhH
Q 013901 109 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188 (434)
Q Consensus 109 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~i~~~~~~~ 188 (434)
+|++|..+..|+|+++|++||| ..++.++..||++||+||++|++.++. ....+|..+.+.+ ..+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~--------~~~~Lp~~~~~~~----~~~ 1132 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA--------ALADLPGLVAARI----DWT 1132 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH--------HHHhCcccccccc----ccc
Confidence 6899999999999999999998 557789999999999999999888652 1111565544444 122
Q ss_pred HHHhcCC-CCeEEEeCChHHHHHHHHHHhccc---CceEEec
Q 013901 189 SALLDQK-WDKICYTGNSRVARIVMAAAAKHL---TPVLLEL 226 (434)
Q Consensus 189 ~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~---~p~~~e~ 226 (434)
..+..++ ++.|.|+|+.++.+.+.+..+++- .|++.|.
T Consensus 1133 ~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1133 QDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred cccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 3566665 999999999999999999988764 3444444
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0097 Score=67.13 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=74.5
Q ss_pred CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEEEeCChHhH
Q 013901 109 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188 (434)
Q Consensus 109 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~i~~~~~~~ 188 (434)
+|++|.....|+|+|+|+++.. ...+.++..+|++||.+|+..++. ....+ ..+|+.+.+.+.- ...
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~-----~~Lp~~v~~~v~~--~~~ 1243 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRALV-----AALPAAVQARIQL--AKD 1243 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHHH-----HhccHHHHhHhhh--ccc
Confidence 6899999999999999998853 367889999999999988864332 22222 3388877665521 111
Q ss_pred HHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceE
Q 013901 189 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVL 223 (434)
Q Consensus 189 ~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~ 223 (434)
..+...+++.|.|.|.....+.+.++.+++-.|++
T Consensus 1244 ~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1244 WQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred cccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 22223458999999999999999999888765544
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=7.2 Score=38.63 Aligned_cols=272 Identities=17% Similarity=0.196 Sum_probs=142.0
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEEe--CCCCChH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVLK--PSEVAPA 160 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVlk--ps~~~~~ 160 (434)
.++.+..+++.|...+.........+-....++.|+--|+++.|.- +|+ ++.+...+||-.+|+.=|+. |+.....
T Consensus 76 ai~~A~~nI~~fh~~q~~~~~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i 155 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGV 155 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCC
Confidence 3444555555555444322221122334456888999999999973 343 34555789999999876544 4432111
Q ss_pred HHHHHHHHHHhhcCCCcEEEEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEe-cCCCCc--
Q 013901 161 SSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP-- 231 (434)
Q Consensus 161 ~~~~l~~~~~~alp~g~v~~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e-~gG~~~-- 231 (434)
....|+.. .. .|+=.+.. |+.+...+|. +. + ||.|+=.|..=+... .+... ..+-.. ..|.+=
T Consensus 156 ~p~iL~Aa-~~---~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~---g~V~ID~~AGPSEvl 227 (416)
T PRK13770 156 SQEVLAAC-YI---TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYA-KKYLF---GQVGIDQIAGPTEIA 227 (416)
T ss_pred CHHHHHHH-HH---cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH-HHHhc---CCcCcCCCCCCceeE
Confidence 22222211 11 12112221 3555555553 22 3 999987775543311 11111 111111 134443
Q ss_pred eEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHH
Q 013901 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311 (434)
Q Consensus 232 ~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~ 311 (434)
+|-+++||.+..+..++--+= .+. . .+.++|..+ +++.+++.+++.+..-. +.. .+-.+
T Consensus 228 ViAD~~Anp~~iAaDLLaQAE-Hd~----~-a~~iLvT~s--~~la~~V~~ev~~ql~~----------lpr---~~i~~ 286 (416)
T PRK13770 228 LIIDETADLDAIVYDVFAQAE-HDE----L-ARTYVISED--AQVLKDLESRIAKALPN----------VDR---YDIVS 286 (416)
T ss_pred EEecCCCCHHHHHHHHHHHhc-cCC----C-CcEEEEeCC--HHHHHHHHHHHHHHHHh----------CCh---HHHHH
Confidence 344556899999988887765 322 2 344555444 44444444444332100 000 11111
Q ss_pred HHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 312 ~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
+-++ -+| .++-++|++|+++++|..-.- -.-|.++|.
T Consensus 287 ~al~---------------------------------------~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~ 323 (416)
T PRK13770 287 KSIA---------------------------------------NQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP 323 (416)
T ss_pred HHHH---------------------------------------hCC---EEEEECCHHHHHHHHHhhChH-hheehhCCH
Confidence 1111 011 345679999999999995333 245888887
Q ss_pred HHHHHHHhhcc-eeeEEECCCchhh------hhhhhhhhcCCCCccc
Q 013901 392 KLKQQFVETVS-AGGLVINDTAVHV------IMLALLKNHTLLRSCI 431 (434)
Q Consensus 392 ~~~~~~~~~~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~~~ 431 (434)
. .+..+++ +|.|++..++.-. ...+.|.++|..|...
T Consensus 324 ~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~s 367 (416)
T PRK13770 324 Q---PYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTN 367 (416)
T ss_pred H---HHHhhCCEeceeccCCCCchhhhccccCCCCcCCCCcceeccC
Confidence 5 5566665 7999997544322 3336778888777643
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=93.36 E-value=8.8 Score=37.78 Aligned_cols=246 Identities=20% Similarity=0.193 Sum_probs=131.8
Q ss_pred CCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEEe--CCCC-ChHHHHHHHHHHHhhcCCCcEEEE-eC
Q 013901 110 PSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVLK--PSEV-APASSSLLAKLVGEYMDLSSIRVV-EG 183 (434)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVlk--ps~~-~~~~~~~l~~~~~~alp~g~v~~i-~~ 183 (434)
+.....++.|+.-|+++.|.- +|+ ++.+...+||-.+|+.=|+. |+.. .......|+.+ +. .|+=.+. -|
T Consensus 79 Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~---~Gv~eIy~vG 154 (393)
T TIGR00069 79 GVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KL---AGVDEVYKVG 154 (393)
T ss_pred CeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HH---cCCCeehhcC
Confidence 445567889999999999983 233 34555788999999875543 4422 11222222211 11 1211222 13
Q ss_pred ChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEe-cCCCCc--eEEcCCCCHHHHHHHHHHHhcccC
Q 013901 184 AVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMGKWGCN 255 (434)
Q Consensus 184 ~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e-~gG~~~--~iv~~dad~~~aa~~i~~~~~~~~ 255 (434)
+.+...+|. +. + ||.|+=.|+.=+... .+... ..+-.. ..|.+= +|-+++||.+..+..++--+= .+
T Consensus 155 GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A-K~~v~---g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-Hd 229 (393)
T TIGR00069 155 GAQAIAALAYGTETVPKVDKIVGPGNIYVTAA-KKLVF---GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE-HD 229 (393)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH-HHHhc---CccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc-cC
Confidence 555555653 22 3 999988876543311 11111 111111 134443 334556899999988887765 32
Q ss_pred CCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcc
Q 013901 256 NGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 335 (434)
Q Consensus 256 ~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~ 335 (434)
. ..+.++|..+ .++.++..+++.+.... +.. .+-.++-++
T Consensus 230 ~-----~a~~iLvT~s--~~la~~V~~~v~~ql~~----------l~r---~~i~~~al~-------------------- 269 (393)
T TIGR00069 230 P-----DAQAILVTTS--EELAEAVQEEIERQLAT----------LPR---REIARKSLE-------------------- 269 (393)
T ss_pred C-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---HHHHHHHHH--------------------
Confidence 2 2344555544 34444444444432110 000 111111111
Q ss_pred cccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEECCCchh
Q 013901 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVH 414 (434)
Q Consensus 336 ~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN~~~~~ 414 (434)
-+| .++.++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++..++.-
T Consensus 270 -------------------~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~ 323 (393)
T TIGR00069 270 -------------------DNG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPE---ELLPKIRNAGSIFLGPYTPE 323 (393)
T ss_pred -------------------hCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhcCccceeccCCCCch
Confidence 011 245679999999999995333 2457888875 5555555 799999764432
Q ss_pred h------hhhhhhhhcCCCCcc
Q 013901 415 V------IMLALLKNHTLLRSC 430 (434)
Q Consensus 415 ~------~~~~~~~~~~~~~~~ 430 (434)
. ...+.|.++|..|..
T Consensus 324 a~GDY~aG~NHvLPT~G~Ar~~ 345 (393)
T TIGR00069 324 AAGDYAAGPNHVLPTGGTARFY 345 (393)
T ss_pred hhhhccCCCCcccCCCcceeec
Confidence 2 233677888877764
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=93.31 E-value=9.4 Score=37.92 Aligned_cols=271 Identities=18% Similarity=0.185 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhhccccccc--cccc-cCCCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEE--eCCC
Q 013901 84 TSIKSALKELKHWMTPEKAK--TSIT-TFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVL--KPSE 156 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVl--kps~ 156 (434)
+.++.+.++++.|...+... .... ..+.....++.|+.-|+++.|.- +|+ ++.+..++||-.+|..=|+ -|+.
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~ 147 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPP 147 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCC
Confidence 44555566666666555422 1111 12445567888999999999953 344 3455578999999976544 4544
Q ss_pred CCh-HHHHHHHHHHHhhcCCCcEEEEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCC
Q 013901 157 VAP-ASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229 (434)
Q Consensus 157 ~~~-~~~~~l~~~~~~alp~g~v~~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~ 229 (434)
..- .....|+.+-. .|+=.+.. |+.+...+|. +. + ||.|+=.|+.=+...=..-......- -..|.
T Consensus 148 ~~G~i~p~vL~Aa~~----~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGP 220 (412)
T PF00815_consen 148 KDGKINPAVLAAAHL----AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAGP 220 (412)
T ss_dssp ------HHHHHHHHH----TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES--------
T ss_pred ccCCCCHHHHHHHHH----cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCCC
Confidence 311 11222222111 12212222 3445555553 22 3 99999888655432211111111111 11344
Q ss_pred Cc--eEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHH
Q 013901 230 SP--VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (434)
Q Consensus 230 ~~--~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~ 307 (434)
+= +|-+++||.+..+-.++--+= .+.. .+.++|..+ +++.+++.+++.+..-. +...+..
T Consensus 221 SEv~ViAD~~A~p~~vAaDLLaQAE-Hd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~----------l~r~~i~ 282 (412)
T PF00815_consen 221 SEVLVIADETANPEFVAADLLAQAE-HDPD-----AQAVLVTTS--EELAEAVEAEVERQLEE----------LPRREIA 282 (412)
T ss_dssp -EEEEEE-TTS-HHHHHHHHHHHHT-T-TT------EEEEEES---HHHHHHHHHHHHHHHTT-----------TTHHHH
T ss_pred CceEEEECCCCCHHHHHHHHHHHhc-cCCC-----CceEEEECC--HHHHHHHHHHHHHHHHh----------CCchHHH
Confidence 43 344677999999988887775 4332 334666655 56666666655543211 1111111
Q ss_pred HHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEe
Q 013901 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 387 (434)
Q Consensus 308 ~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 387 (434)
.+-+ + + -.++.++|++|+++++|..-.- -..|.
T Consensus 283 ---~~sl---------------------------------------~-~---g~ii~~~~l~ea~~~~N~~APE-HLel~ 315 (412)
T PF00815_consen 283 ---EKSL---------------------------------------E-N---GAIIVVDSLEEAIELANEYAPE-HLELQ 315 (412)
T ss_dssp ---HHHH---------------------------------------T-T----EEEE-SSHHHHHHHHHHH--S-EEEEE
T ss_pred ---HHHH---------------------------------------H-C---CeEEEECCHHHHHHHHHHhhHH-HHHHH
Confidence 1100 0 1 1356679999999999995333 36788
Q ss_pred cCCHHHHHHHHhhcc-eeeEEECCCchhh------hhhhhhhhcCCCCc
Q 013901 388 TNNKKLKQQFVETVS-AGGLVINDTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 388 t~d~~~~~~~~~~~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~ 429 (434)
++|.. .+..+++ +|.|++..++.-. ...+.|.++|..|.
T Consensus 316 ~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~ 361 (412)
T PF00815_consen 316 VEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGGTARF 361 (412)
T ss_dssp STTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS------TTGGGT
T ss_pred HcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCccccc
Confidence 88875 5566665 7999999755332 23366777777775
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.22 E-value=13 Score=36.97 Aligned_cols=315 Identities=16% Similarity=0.168 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcccccccc--cc
Q 013901 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT--SI 106 (434)
Q Consensus 41 R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ei~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~ 106 (434)
-.+..+.+-+.++++.|+-+...++...+- +.-+ ..|++.+ .+.++.++++++.|...+.... ..
T Consensus 22 ~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~Vs-~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 100 (426)
T PRK12447 22 VRETVEAILADIEARGDAAVREYSRKFDKWSPGSFRLS-AAEIDAAVAKVPEQVKEDIRFAQDQVRRFAEAQRDSLQDLE 100 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence 344555555556666555444343333321 1111 1233322 2334445555666554433211 11
Q ss_pred --ccCCCcceEeeecceEEEEEcCC-chhH-HhhHhHHHHHHhhCCEEEE--eCCCCChHHHHHHHHHHHhhcCCCcEEE
Q 013901 107 --TTFPSSAEIVPEPFGVVLIISPW-NYPF-LLSLDPVVGAIAAGNALVL--KPSEVAPASSSLLAKLVGEYMDLSSIRV 180 (434)
Q Consensus 107 --~~~~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~~~~AL~aGN~vVl--kps~~~~~~~~~l~~~~~~alp~g~v~~ 180 (434)
...|.....++.|+.-|+++.|. .+|+ ++.+..++||-.+|+.=|+ -|+.........|+.+-. .|+=.+
T Consensus 101 ~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa~~----~Gv~eI 176 (426)
T PRK12447 101 VETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVAAMHL----AGADEI 176 (426)
T ss_pred EecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHHHH----cCCCee
Confidence 11233456688899999999997 3343 3455578999999987544 354321122222222111 122122
Q ss_pred Ee-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEe-cCCCCce--EEcCCCCHHHHHHHHHHHh
Q 013901 181 VE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSPV--VFDSGINLKVACRRMIMGK 251 (434)
Q Consensus 181 i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e-~gG~~~~--iv~~dad~~~aa~~i~~~~ 251 (434)
.. |+.+...+|. +. + ||.|+=.|+.-+... .+... ..+-.. ..|.+=+ |-+++||.+..+..++--+
T Consensus 177 y~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~---g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 252 (426)
T PRK12447 177 YVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA-KRQLF---GRVGIDLFAGPTETLVIADDTADPELVATDLLGQA 252 (426)
T ss_pred hhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH-HHHhc---CccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 21 3555555653 22 3 999998876544311 11111 111111 1344433 3355689999998888776
Q ss_pred cccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCC
Q 013901 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 331 (434)
Q Consensus 252 ~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~ 331 (434)
= .+.. .+.++|..+ +++.+++.+++.+.... +.. .+-.++-++
T Consensus 253 E-Hd~~-----a~~iLvT~s--~~la~~V~~~v~~ql~~----------l~r---~~i~~~sl~---------------- 295 (426)
T PRK12447 253 E-HGPN-----SPAVLITTS--RKLAEEVLAEIERLLAI----------LPT---ADVASAAWR---------------- 295 (426)
T ss_pred c-cCCC-----CceEEEECC--HHHHHHHHHHHHHHHHh----------CCH---HHHHHHHHH----------------
Confidence 5 3322 344556554 45555555554442110 000 111111111
Q ss_pred CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEECC
Q 013901 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVIND 410 (434)
Q Consensus 332 ~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN~ 410 (434)
-+| .++-++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++..
T Consensus 296 -----------------------~~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~ 345 (426)
T PRK12447 296 -----------------------DYG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLGE 345 (426)
T ss_pred -----------------------hCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCC
Confidence 011 245679999999999995333 2458888874 5566665 79999965
Q ss_pred Cchhh------hhhhhhhhcCCCCccc
Q 013901 411 TAVHV------IMLALLKNHTLLRSCI 431 (434)
Q Consensus 411 ~~~~~------~~~~~~~~~~~~~~~~ 431 (434)
++.-. ...+.|.++|..|...
T Consensus 346 ~sp~a~GDY~aGpNHvLPT~G~Ar~~s 372 (426)
T PRK12447 346 RTNVAYGDKVIGTNHVLPTSGAARYTG 372 (426)
T ss_pred CCchhhhhcccCCCcccCCCcceeecC
Confidence 44322 2336778888887643
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.84 E-value=13 Score=36.19 Aligned_cols=235 Identities=17% Similarity=0.120 Sum_probs=125.7
Q ss_pred CCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEEEe-CChHhH
Q 013901 110 PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAVAET 188 (434)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~i~-~~~~~~ 188 (434)
+-....++.|+--|+++.|.-|| ++.+...+||-.+|+.=|+.-+|-.......|+.+ .. .|+=.+.. |+.+..
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~aa-~~---~Gv~eIy~vGGAQAI 158 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLAVA-KE---LGVKGVLAIGGPHGL 158 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHHHH-HH---cCCCeeecccCHHHH
Confidence 34456688999999999996554 45566789999999876544222111222222211 11 12212221 344444
Q ss_pred HHHhcC-CCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEE
Q 013901 189 SALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267 (434)
Q Consensus 189 ~~L~~~-~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 267 (434)
.++.-. +||.|+=.|+.=+...=......-..- +-.|-.--+||-+++|.+..+..++--+= ... ..+.++
T Consensus 159 Aa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAE-H~~-----~a~~iL 230 (368)
T PRK13769 159 AYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLE-HGP-----TSFAYL 230 (368)
T ss_pred HHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhh-cCC-----CCcEEE
Confidence 455433 599998887654431111111111111 11122333555556888888877776654 222 234455
Q ss_pred EeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCC
Q 013901 268 TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD 347 (434)
Q Consensus 268 V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~ 347 (434)
|..+ .++.++..+++.+. +.. . .|
T Consensus 231 vT~s--~~la~~V~~~v~~~--------------------------~~~----~---~~--------------------- 254 (368)
T PRK13769 231 LSTD--AELLKAAEEIYRRE--------------------------RTS----S---MG--------------------- 254 (368)
T ss_pred EECC--HHHHHHHHHHHHHH--------------------------HHh----c---CC---------------------
Confidence 5555 45555555543321 100 0 00
Q ss_pred CCccccccccceeeEeecCCHHHHHHHHhcC-CCCcEEEEecCCHHHHHHHHhhcc-eeeEEECCCchhh----hhhhhh
Q 013901 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVHV----IMLALL 421 (434)
Q Consensus 348 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN~~~~~~----~~~~~~ 421 (434)
- ..++.++|++|+++++|.. +-+|.. .+ ... +..+++ +|.|+++.+.... ...+.|
T Consensus 255 ----------~-~~iivv~~leeai~~~N~~APEHLel--~~-~~~----~~~~i~nAGsiFl~~p~a~GDY~aGpNHvL 316 (368)
T PRK13769 255 ----------P-LEVRKVAGVEEAVRFIDEIAPEHLEV--WG-RRE----VAYRVRNVGAVSVNMPSPYLDYVAGISHVL 316 (368)
T ss_pred ----------C-CeEEEECCHHHHHHHHHhhChHheEe--eC-cHH----HHhhCCccCChhcCCchhhhccccCCCCcC
Confidence 0 2467789999999999994 333443 44 222 344554 8999997643222 333677
Q ss_pred hhcCCCCccc
Q 013901 422 KNHTLLRSCI 431 (434)
Q Consensus 422 ~~~~~~~~~~ 431 (434)
.++|..|...
T Consensus 317 PT~G~AR~~s 326 (368)
T PRK13769 317 PTGGTARWRG 326 (368)
T ss_pred CCCcceeccC
Confidence 8888887643
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=91.68 E-value=15 Score=36.31 Aligned_cols=245 Identities=19% Similarity=0.184 Sum_probs=131.3
Q ss_pred CCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEE--eCCCCC-hHHHHHHHHHHHhhcCCCcEEEEe-C
Q 013901 110 PSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVL--KPSEVA-PASSSLLAKLVGEYMDLSSIRVVE-G 183 (434)
Q Consensus 110 ~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVl--kps~~~-~~~~~~l~~~~~~alp~g~v~~i~-~ 183 (434)
+.....++.|+--|+++.|.- +|+ ++.+..++||-.+|+.=|+ .|+... ......|+.+-. .|+=.+.. |
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~----~Gv~eiy~vG 158 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKL----AGVDEIYKVG 158 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHH----cCCcEEeccC
Confidence 455677889999999999974 444 3455568899999987544 354321 111222221111 12222222 3
Q ss_pred ChHhHHHHhc----CC-CCeEEEeCChHHHHHHHHHHhcccCceEEe-cCCCCc--eEEcCCCCHHHHHHHHHHHhcccC
Q 013901 184 AVAETSALLD----QK-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMGKWGCN 255 (434)
Q Consensus 184 ~~~~~~~L~~----~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e-~gG~~~--~iv~~dad~~~aa~~i~~~~~~~~ 255 (434)
+.+...+|.- -+ ||.|+=.|..-+... .+.... .+-.. ..|.+= +|-+++||.+..+-.++--+= ..
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A-K~~v~g---~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE-H~ 233 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTAA-KRLVSG---DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE-HD 233 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH-HHHhcC---CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhc-cC
Confidence 5555666532 23 999987775443211 111111 11111 134443 334556899999888887764 22
Q ss_pred CCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcc
Q 013901 256 NGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR 335 (434)
Q Consensus 256 ~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~ 335 (434)
. ..+.++|..+ .++.++..+++.+..-. +... +...+.+.
T Consensus 234 ~-----~a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r~---~~~~~~~~-------------------- 273 (390)
T cd06572 234 P-----DSQAILVTTS--EELAEAVEEEVERQLAE----------LPRR---EIAAKSLL-------------------- 273 (390)
T ss_pred C-----CCeEEEEECC--HHHHHHHHHHHHHHHHh----------CCcH---HHHHHHHH--------------------
Confidence 1 2344555554 45555555554432110 0000 00111110
Q ss_pred cccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEECCCchh
Q 013901 336 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVINDTAVH 414 (434)
Q Consensus 336 ~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN~~~~~ 414 (434)
-+ -.++.++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++-.++.-
T Consensus 274 -------------------~~---g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGsiFlG~~tp~ 327 (390)
T cd06572 274 -------------------DY---GAIILVDDLEEAIELANEYAPE-HLELQTEDPE---ELLEKIRNAGSIFLGPYTPE 327 (390)
T ss_pred -------------------hC---CEEEEECCHHHHHHHHHhhchh-hheeHhcCHH---HHHhhCccceEEeecCCCch
Confidence 01 1356679999999999995333 2568888875 3555554 899999875432
Q ss_pred h------hhhhhhhhcCCCCc
Q 013901 415 V------IMLALLKNHTLLRS 429 (434)
Q Consensus 415 ~------~~~~~~~~~~~~~~ 429 (434)
. ...+.|.++|..|.
T Consensus 328 a~GDY~aGpNHvLPT~G~Ar~ 348 (390)
T cd06572 328 ALGDYAAGPNHVLPTGGTARF 348 (390)
T ss_pred hhhccccCCCCccCCCcceee
Confidence 2 22367777777775
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.19 E-value=17 Score=36.04 Aligned_cols=270 Identities=20% Similarity=0.229 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHhhccccccccc--cccCCCcceEeeecceEEEEEcC---CchhHHhhHhHHHHHHhhCCEEE--EeCCC
Q 013901 84 TSIKSALKELKHWMTPEKAKTS--ITTFPSSAEIVPEPFGVVLIISP---WNYPFLLSLDPVVGAIAAGNALV--LKPSE 156 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~AL~aGN~vV--lkps~ 156 (434)
+.++.++++++.+...+..... ....|-....++.|+--|+++.| .-||-. .+...+||-.+|+.=| ..|++
T Consensus 79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~ 157 (425)
T COG0141 79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPP 157 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCC
Confidence 3445556666666655543211 12233455678889999999999 455544 4456789999998654 34554
Q ss_pred CChHHHHHH--HHHHHhhcCCCcEEEEeCChHhHHHHhc-----CCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCC
Q 013901 157 VAPASSSLL--AKLVGEYMDLSSIRVVEGAVAETSALLD-----QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229 (434)
Q Consensus 157 ~~~~~~~~l--~~~~~~alp~g~v~~i~~~~~~~~~L~~-----~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~ 229 (434)
..-.....| ++++- .. .+++ + |+.+...+|.= .+||.|+=.|+.-+... .+..... .-+ =-..|.
T Consensus 158 ~~gv~p~iL~AA~~~G--v~-eIy~-v-GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA-Kr~v~g~-V~I-D~~AGP 229 (425)
T COG0141 158 KDGVNPEILAAARLAG--VD-EVYK-V-GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA-KRLVSGV-VGI-DMIAGP 229 (425)
T ss_pred CCCCCHHHHHHHHHhC--cH-HHHH-c-cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH-HHHhhCC-ccc-CCCCCC
Confidence 321111111 11110 00 0011 1 35555556642 23999988886554311 1111110 000 011244
Q ss_pred Cc--eEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHH
Q 013901 230 SP--VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (434)
Q Consensus 230 ~~--~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~ 307 (434)
+= +|-++++|.+..+-.++--+= .+. ..+.|+|..+ ++|.++..+++.+..-.- . ..
T Consensus 230 SEvlViAD~ta~p~~vA~DLLsQAE-Hd~-----~a~aiLvT~s--~~la~~v~~~v~~~l~~l----------~---~~ 288 (425)
T COG0141 230 SEVLVIADETANPDFVAADLLSQAE-HDP-----DAQAILVTDS--EELAEAVEAAVERQLETL----------P---RA 288 (425)
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHhh-cCC-----CceEEEEeCc--HHHHHHHHHHHHHHHHhc----------c---HH
Confidence 43 333556899999988887765 332 2345666555 566666666655432100 0 01
Q ss_pred HHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEe
Q 013901 308 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 387 (434)
Q Consensus 308 ~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~ 387 (434)
+...+.++ -|| .|+.++|++|+++++|..-.- -.-|.
T Consensus 289 ei~~~~l~---------------------------------------~~g---~iilv~~l~ea~~~~N~~APE-HLei~ 325 (425)
T COG0141 289 EIARKALE---------------------------------------NYG---AIILVDDLDEAVEISNEYAPE-HLELQ 325 (425)
T ss_pred HHHHHHHH---------------------------------------hCC---eEEEECCHHHHHHHHHhhChH-hhhhh
Confidence 11111111 111 355679999999999995333 35688
Q ss_pred cCCHHHHHHHHhhcc-eeeEEECCCchhh------hhhhhhhhcCCCCc
Q 013901 388 TNNKKLKQQFVETVS-AGGLVINDTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 388 t~d~~~~~~~~~~~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~ 429 (434)
++|.. .+..+++ +|.|++..++.-. ...+.+.++|.-|-
T Consensus 326 ~~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT~g~AR~ 371 (425)
T COG0141 326 TENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPTSGTARF 371 (425)
T ss_pred hcCHH---HHHHHhcccceeeecCCCCccccccccCCCccCCCCccchh
Confidence 88876 4555555 8999999854322 22366666665554
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.82 E-value=23 Score=35.38 Aligned_cols=318 Identities=16% Similarity=0.157 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhccccccccc
Q 013901 38 YGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKTS 105 (434)
Q Consensus 38 ~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ei~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 105 (434)
..+-.+..+.+-+.++.+.|+-+...++...+. +.-+ ..|++.+ .+.++.+.++++.|...+.....
T Consensus 26 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs-~~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~ 104 (425)
T PRK00877 26 DEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVS-EEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESW 104 (425)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeC-HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 344455566666666666666544444443321 1111 1234332 33445555666666554433221
Q ss_pred c--ccCCCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEE--eCCCCChHHHHHHHHHHHhhcCCCcEE
Q 013901 106 I--TTFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVL--KPSEVAPASSSLLAKLVGEYMDLSSIR 179 (434)
Q Consensus 106 ~--~~~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVl--kps~~~~~~~~~l~~~~~~alp~g~v~ 179 (434)
. ...|.....++.|+--|+++.|.- +|+ ++.+...+||-.+|..=|+ -|+.........|+.+ +. .|+=.
T Consensus 105 ~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~---~Gv~e 180 (425)
T PRK00877 105 DVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-AL---AGVDE 180 (425)
T ss_pred EEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HH---cCCCe
Confidence 1 112334556888999999999983 232 3455578999999987544 3543211222222211 11 12112
Q ss_pred EEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEe-cCCCCceE--EcCCCCHHHHHHHHHHH
Q 013901 180 VVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSPVV--FDSGINLKVACRRMIMG 250 (434)
Q Consensus 180 ~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e-~gG~~~~i--v~~dad~~~aa~~i~~~ 250 (434)
+.. |+.+...+|. +. + ||.|+=.|+.=+... .+.... .+-.. ..|.+=++ -+++||.+..+..++--
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQ 256 (425)
T PRK00877 181 VYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAA-KRLVFG---VVGIDMIAGPSEILVIADETADPDFVAADLLSQ 256 (425)
T ss_pred eeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH-HHHHcC---CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 221 3555566663 22 3 999998876543311 111111 11111 13444333 35568999999888877
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccC
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~ 330 (434)
+= .+.. .+.++|..+ +++.+++.+++.+.... +.. .+-.++-++
T Consensus 257 AE-Hd~~-----a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r---~~ia~~sl~--------------- 300 (425)
T PRK00877 257 AE-HDPD-----AQSILVTTS--EELAEAVAAEVERQLAT----------LPR---AEIARASLE--------------- 300 (425)
T ss_pred hc-cCCC-----CcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---HHHHHHHHH---------------
Confidence 65 3322 344555554 45555555544432110 000 111111111
Q ss_pred CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEEC
Q 013901 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVIN 409 (434)
Q Consensus 331 ~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN 409 (434)
-+| .++.++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++.
T Consensus 301 ------------------------~~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG 349 (425)
T PRK00877 301 ------------------------GQG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFLG 349 (425)
T ss_pred ------------------------hCC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccC
Confidence 011 245679999999999995333 2558888875 4555555 8999997
Q ss_pred CCchhh------hhhhhhhhcCCCCccc
Q 013901 410 DTAVHV------IMLALLKNHTLLRSCI 431 (434)
Q Consensus 410 ~~~~~~------~~~~~~~~~~~~~~~~ 431 (434)
.++.-. ...+.|.++|..|...
T Consensus 350 ~~tp~a~GDY~aGpNHvLPT~G~AR~~s 377 (425)
T PRK00877 350 PYTPESLGDYAAGPNHVLPTSGTARFSS 377 (425)
T ss_pred CCCchhhhhcccCCCcccCCCcceeecC
Confidence 644322 3336778888877643
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=89.39 E-value=25 Score=35.18 Aligned_cols=273 Identities=15% Similarity=0.170 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHhhccccccccc--c-ccCCCcceEeeecceEEEEEcCCc-hhH-HhhHhHHHHHHhhCCEEEE--eCCC
Q 013901 84 TSIKSALKELKHWMTPEKAKTS--I-TTFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALVL--KPSE 156 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~AL~aGN~vVl--kps~ 156 (434)
+.++.+.++++.|...+..... . ...+-....++.|+.-|+++.|.- +|+ ++.+..++||-.+|..=|+ -|+.
T Consensus 82 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~ 161 (431)
T PLN02926 82 EAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPR 161 (431)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCC
Confidence 3344455555555554432221 1 123344567888999999999983 233 4455678999999986544 4543
Q ss_pred CC-hHHHHHHHHHHHhhcCCCcEEEEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCc--eEEe-c
Q 013901 157 VA-PASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTP--VLLE-L 226 (434)
Q Consensus 157 ~~-~~~~~~l~~~~~~alp~g~v~~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p--~~~e-~ 226 (434)
.. ......|+.+ +. .|+=.+.. |+.+...+|. +. + ||.|+=.|+.=+...= +.... .+ |-.. .
T Consensus 162 ~~g~i~p~iL~AA-~~---~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK-~~v~G--~~~~VgID~~ 234 (431)
T PLN02926 162 KDGSICPEVLYCA-KK---AGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAK-MILQN--SEAMVSIDMP 234 (431)
T ss_pred cCCCCCHHHHHHH-HH---cCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHH-HHhhC--CCCccccCCC
Confidence 21 1222222211 11 12112221 3555556653 22 3 9999988865433111 11111 10 1111 1
Q ss_pred CCCCceE--EcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCH
Q 013901 227 GGKSPVV--FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNS 304 (434)
Q Consensus 227 gG~~~~i--v~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~ 304 (434)
.|.+=++ -+++||.+.++..++--+= .+.. .+.++|..+ .++.+++.+++.+..-. +..
T Consensus 235 AGPSEvlIiAD~tA~p~~vAaDLLaQAE-Hdp~-----a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r- 295 (431)
T PLN02926 235 AGPSEVLVIADKTANPVHVAADLLSQAE-HGPD-----SQVVLVAVG--DVDLDAIEEEVEKQCQS----------LPR- 295 (431)
T ss_pred CCCceeEEEeCCCCCHHHHHHHHHHHhc-cCCC-----CcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh-
Confidence 3444433 3556899999988887765 3322 344556555 45555555544432100 000
Q ss_pred HHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEE
Q 013901 305 NHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 384 (434)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~ 384 (434)
.+..+ +-+.. -.++.++|++|+++++|..-.- -.
T Consensus 296 ------~~i~~--------------------------------------~sl~~-g~iivv~~l~ea~~~~N~~APE-HL 329 (431)
T PLN02926 296 ------GEIAS--------------------------------------KALGH-SFIVVARDMAEAISFSNLYAPE-HL 329 (431)
T ss_pred ------HHHHH--------------------------------------HHHHC-CEEEEECCHHHHHHHHHhhChH-hh
Confidence 01111 00011 1356679999999999995333 24
Q ss_pred EEecCCHHHHHHHHhhcc-eeeEEECCCchhh------hhhhhhhhcCCCCccc
Q 013901 385 YLFTNNKKLKQQFVETVS-AGGLVINDTAVHV------IMLALLKNHTLLRSCI 431 (434)
Q Consensus 385 ~i~t~d~~~~~~~~~~~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~~~ 431 (434)
-|.++|.. .+..+++ +|.|++..++.-. ...+.|.++|..|...
T Consensus 330 ei~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~s 380 (431)
T PLN02926 330 IVNVEDAE---SWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTYGYARMYG 380 (431)
T ss_pred eehhcCHH---HHHhhcCccceeccCCCCchhhhccccCcCcccCCCcceeecC
Confidence 58888875 5555555 7999996533221 3336778888877643
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.28 E-value=27 Score=35.87 Aligned_cols=105 Identities=19% Similarity=0.167 Sum_probs=70.8
Q ss_pred CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEEEeCChHhH
Q 013901 109 FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 188 (434)
Q Consensus 109 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~i~~~~~~~ 188 (434)
.++.|.....|+|-|+++.+. ....+.+++.+|+.||.+++.+.+....... .+|..+=..+.-. .
T Consensus 633 tGErN~~~l~pr~rvl~~~~~---~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~--------~l~~~v~~~~~~~---~ 698 (769)
T COG4230 633 TGERNTYTLHPRGRVLCVAGD---EQDLLTQLAAVLAVGNQVVIPEDSGLAALLK--------DLPSAVASRIQVA---K 698 (769)
T ss_pred cccceeecccCCccEEEeCCC---HHHHHHHHHHHHhcCCeEEecCcchHHHHHH--------hchhhhhhheeec---c
Confidence 568899999999999998664 6778889999999999999966533222221 1444331111100 1
Q ss_pred HHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecC
Q 013901 189 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227 (434)
Q Consensus 189 ~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~g 227 (434)
......+.+.+.|.|.++..+.+.+..+.+..|++.-.+
T Consensus 699 ~~~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 699 DWTADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred chhhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 111223589999999999989998877777666665544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 434 | ||||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-94 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 3e-89 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-57 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-55 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-30 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 6e-30 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-29 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 1e-29 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-29 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-29 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-28 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-27 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-27 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 2e-27 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 8e-27 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-26 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-25 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-25 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 5e-25 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 6e-25 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 6e-25 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-24 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-24 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-24 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-24 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 5e-24 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 6e-24 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-24 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-23 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-23 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-23 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-23 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-23 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-23 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-23 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-23 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-23 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-23 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 4e-23 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 7e-23 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-23 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-22 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-22 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-22 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-22 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-22 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 4e-22 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 7e-22 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-21 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-21 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-21 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 3e-21 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 5e-21 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 5e-21 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 8e-21 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-20 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-20 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 6e-20 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-19 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-18 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-18 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 3e-18 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 5e-18 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-18 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-17 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-17 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 3e-17 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 4e-17 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-16 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 5e-15 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 7e-14 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-13 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-13 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-13 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 6e-13 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-11 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 7e-11 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 5e-10 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-08 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 9e-08 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-07 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-05 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-05 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-05 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-05 |
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 614 bits (1587), Expect = 0.0
Identities = 168/398 (42%), Positives = 253/398 (63%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F+SG+T+ +R+ QL++L +++ E+E ++V AL DL K E + EV +
Sbjct: 24 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I+ +++L W E + + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE++ +SLLA ++ +Y+D V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +I+M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L+ FYG++ +S+D RI+++ HF R+ L++ K
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEG----QK 318
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+ +GG D IAPT+L DV S +M EEIFGP+LPI+ V +E++ IN KPL
Sbjct: 319 VAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N K+ ++ + S+GG+ ND VH+ + +L
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSL 416
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 529 bits (1365), Expect = 0.0
Identities = 125/399 (31%), Positives = 207/399 (51%), Gaps = 8/399 (2%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
+ FA+ T G+R L+ L + + + + AL +DL KP+ + E+ +
Sbjct: 34 FSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I AL L W+ P + PS +V EP+GV II P+NYP L+L P++G
Sbjct: 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIG 153
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AI GN ++KPSE P +S+++ K++ E + V++G E S LL +D I +T
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFT 213
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ V ++VM AAAKHLTPV+LELGGK P++ +L +++ GK+ N+GQ I+
Sbjct: 214 GSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIA 272
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD++ LLE L ++ + ++V RL LL+ + G+
Sbjct: 273 PDYLYVHYSVKDALLERLVERVKTELPEIN----STGKLVTERQVQRLVSLLEATQ--GQ 326
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKP 381
++ G + D +K ++ T++ V + +MSEE+FGP+LP+L D + + D +N KP
Sbjct: 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386
Query: 382 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
LA Y+F + + + + + +G +N +H L
Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYL 425
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 1e-53
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 27/306 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + G +E + Q + I +TG++ + + A + P++LEL
Sbjct: 202 V--------FNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLEL 251
Query: 227 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK V + +L++ + +I G +G +GQ C + ++ + A +L+E ++ ++
Sbjct: 252 GGKDSAIVLEDA-DLELTAKNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVL 309
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 344
NP + D++ ++++ + L++D G + +R+ N I P L V
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--LICPILFDKV 367
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
D + EE FGP+LPI+ V +E++ +I N L A +FTN+ E + G
Sbjct: 368 TTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 427
Query: 405 GLVIND 410
+ IN+
Sbjct: 428 TVHINN 433
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 4e-53
Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 27/388 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + + ++L E +IV+ L ++ ++++ E+ L K
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITK--------ESASF 124
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ PS+ + GVV +ISPWN+P LS+ V A+A GNA+V+KP+
Sbjct: 125 PGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184
Query: 156 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 211
P + ++ + E + + I V GA +E I +TG++ V R V
Sbjct: 185 SDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244
Query: 212 M--AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 268
A + V LELGG +P VV ++ A + +G + + GQ C+S + +I
Sbjct: 245 GELAINGGPMKTVALELGGNAPFVVLADA-DIDAAAQAAAVGAFL-HQGQICMSINRVIV 302
Query: 269 TKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 326
+ LE ++N +P + ++N + + L + ++ K G +
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362
Query: 327 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
G + + P + DV D I EEIFGPL+ +L D + ++ N+ L+A +
Sbjct: 363 GPIEGR--LVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAV 420
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAVH 414
++ + QF + +G + IND V+
Sbjct: 421 WSKDIDRAAQFALQIDSGMVHINDLTVN 448
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 9e-53
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 27/306 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP GVVL ISP+NYP L+ + A+ GN +V KP+ S + +
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEG 210
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ I+VV G + L D I +TG + + A + PV+LEL
Sbjct: 211 I--------IQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLEL 260
Query: 227 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK P V D +LK+ +++ G + +GQ C + + A +L+ ++K +E
Sbjct: 261 GGKDPAIVLDDA-DLKLTASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVE 318
Query: 286 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 344
+P + D++ +++ A + L+DD +G ++ G +R N ++PTLL DV
Sbjct: 319 QLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN--LLSPTLLDDV 376
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+ EE FGP+LPI+ V ++ + N L A +FT + + + G
Sbjct: 377 TPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVG 436
Query: 405 GLVIND 410
+ IN
Sbjct: 437 TVHINA 442
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 2e-52
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 23/332 (6%)
Query: 96 WMTPEKAKTSITTFPSS-AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
M I + P P GV + ISPWN+ + + V I GN +VLKP
Sbjct: 148 QMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKP 207
Query: 155 SEVAPASSSLLAKLVGEYMDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSR 206
+ P ++ +++ + + I V G+ AE L K I +TG+
Sbjct: 208 ASTTPVVAAKFVEVLED-----AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKD 262
Query: 207 VARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 260
V + AA HL V++E+GGK VV D +L +A +++ +G +GQ C
Sbjct: 263 VGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG-FSGQKC 321
Query: 261 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKV 319
+ + KD ++LE +N +P + +++ F ++ ++ K
Sbjct: 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381
Query: 320 SGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378
G+++ GGE D + I PT++ D+ +++IM EEIFGP++ + + + +I N+
Sbjct: 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNT 441
Query: 379 TKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
L + T N+ +Q G L N
Sbjct: 442 EYGLTGAVITRNRAHIEQAKREFHVGNLYFNR 473
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 2e-52
Identities = 87/386 (22%), Positives = 169/386 (43%), Gaps = 24/386 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+ L+E DI+ + ++ ++S+I E+ + A+ +
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVK 126
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
PS E I P GV+ ISP+N+P LS+ + AIA GN++V KP
Sbjct: 127 -------EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 156 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 211
S + E+ L + + V+ V E + + I +TG++ V R +
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239
Query: 212 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
A + + LELGG +P V ++ A I GK+ + GQ C+ + II +
Sbjct: 240 GEIAGRAFKRMALELGGNNPFAVLSDA-DVDRAVDAAIFGKFI-HQGQICMIINRIIVHQ 297
Query: 271 DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 328
D + +E ++ + + K + ++N + ++++ K G ++ G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
Query: 329 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
R N L P + + +S I E+F P+ I+ +++ D+ N L++ +FT
Sbjct: 358 RVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVH 414
++ + ++F + +G +ND +V+
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVN 441
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 8e-52
Identities = 99/407 (24%), Positives = 173/407 (42%), Gaps = 25/407 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A V+ + + S R + L ++K R+ DIV A+ +L P S
Sbjct: 46 DVDKA---VEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLS 102
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ +A L +V E GV +I+PWN+P
Sbjct: 103 ERVHYQMGLNHFVAARDALD--------NYEFEERRGDDLVVKEAIGVSGLITPWNFPTN 154
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
+ + A AAG+ +VLKPSE P ++ +LA++ + + + +V G A L
Sbjct: 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDK-VGVPKGVFNLVNGDGAGVGNPL 213
Query: 193 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
+ K + +TG+ +M AAK V LELGGKSP +V D +++K A +
Sbjct: 214 SEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLD-DVDIKEAAKATTG 272
Query: 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFA 308
N GQ C + ++ L LK + NP + + I++ F
Sbjct: 273 KVVN-NTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFD 331
Query: 309 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
++ ++ G ++ +GG L PT+ ++V I EEIFGP++ ++
Sbjct: 332 QVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVI 391
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
T + ++++ I N LA Y+ +K+ + ++ AG + IN+
Sbjct: 392 TYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE 438
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 2e-51
Identities = 67/311 (21%), Positives = 137/311 (44%), Gaps = 27/311 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------G 170
EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K +
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 171 EYMDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGG 228
+I ++ E ++ D + + +TG++ V V+ K +ELGG
Sbjct: 216 ------AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---MELGG 266
Query: 229 KSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
P V + +L +A ++ G + GQ C + ++ + KL+E + L +
Sbjct: 267 GDPAIVLEDA-DLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSL 324
Query: 288 YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL--- 342
+P + D+ +++ + + ++D G +++ GG R + PT +
Sbjct: 325 RVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTFVEAPA 383
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402
D +D ++ E+F P+ + V ++ + ++ N L A +F + ++ V +
Sbjct: 384 DRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLE 443
Query: 403 AGGLVINDTAV 413
G + IND
Sbjct: 444 VGAIYINDMPR 454
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 6e-51
Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 18/304 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP G+V I+P+N+P LS + AIA GN +V PS AP LAK++ + +
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 178 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
+ ++ GA + ++K + I +TG+S+V ++ A + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 231 PV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P V +L A +I G + GQ CIS I+ + A K +E N+ +
Sbjct: 247 PNIVLKDA-DLNKAVNALIKGSFI-YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 347
NPL+ K D+ +++ H + K+++ G K++ GG+RDK PT+L +V RD
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKA--LFYPTIL-EVDRD 361
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+++ E F P++PI+ ++ E+ DI NS L + +FTN+ +F E + GG+V
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420
Query: 408 INDT 411
IND+
Sbjct: 421 INDS 424
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 4e-50
Identities = 93/413 (22%), Positives = 185/413 (44%), Gaps = 26/413 (6%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA+ A + + F + KT S R+ ++ ++++ +R D+ + ++ P +
Sbjct: 64 DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ A + I++ +K + ++ A + + GVV +I+PWN+P
Sbjct: 121 LNAQTATGSSHIRNFIK----AYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMN 176
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 192
V+ A+ AG +VLKPSE+AP S+ L A+++ E L S ++ G A + L
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE-AALPSGVFNLINGDGANVGSYL 235
Query: 193 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 249
+ I +TG++R + + A+ L V LELGGK ++F ++
Sbjct: 236 SAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA-DADIDAL----QR 290
Query: 250 GKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNH 306
G C N+GQ+C +P ++ + K +++ K+ E ++ + +V+
Sbjct: 291 GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQ 350
Query: 307 FARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLP 361
+ ++ L+ G +V GG + + PT+ DV I EEIFGP+L
Sbjct: 351 YDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLS 410
Query: 362 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 414
+L + +++ + N L Y+ + ++ ++ V +G + +N +
Sbjct: 411 LLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELP 463
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 3e-49
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 21/319 (6%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
E P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 167 NESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE- 225
Query: 173 MDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------H 218
+ + + G E A L + I +TG+ V + AA +
Sbjct: 226 ----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTW 281
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 278
+E GGK+ ++ D + +A +++ +G GQ C + +I T+ +LE
Sbjct: 282 FKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLE 340
Query: 279 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIA 337
+ E E+ DL +V++ ++ ++ K G++V GG+R + + IA
Sbjct: 341 RVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIA 400
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397
PT+ +VP + I EEIFGP+L ++ V ++ ++ N L +++ ++ +
Sbjct: 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWA 460
Query: 398 VETVSAGGLVINDTAVHVI 416
G L N +
Sbjct: 461 RREFHVGNLYFNRKITGAL 479
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 8e-49
Identities = 102/416 (24%), Positives = 170/416 (40%), Gaps = 41/416 (9%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQDL 67
D +AA V R F +G W R + + + +KML ER+ L +
Sbjct: 47 DVDAA---VAAARAAFDNG-----PWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAET 98
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
+P ++ + T + + EP GVV I
Sbjct: 99 GQPPTIIETMHWMGSMGAMNYFAG----AADKVTWTETRTGSYGQSIVSREPVGVVGAIV 154
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAV-- 185
WN P L+++ + A+ AG +VLKP+ P +++ LA++ E + + EG +
Sbjct: 155 AWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAE------VGLPEGVLSV 208
Query: 186 ----AETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGI 238
ET L + D +TG+S V R V AA+ L P LELGGKS ++ +
Sbjct: 209 VPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDV- 267
Query: 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-D 297
+L A M+ N GQ C++ I+ + +++ ++ N + P +
Sbjct: 268 DLAAAIPMMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326
Query: 298 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSLIMSE 353
+ +++ R+ + G ++V GG R + I PT+ DV I E
Sbjct: 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQE 386
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EIFGP+L I+ D ED+ I N LA ++T + + + + G IN
Sbjct: 387 EIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN 442
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 2e-46
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
I +P GVV I+PWNYP +++ L P A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAP---ALAAGNCVVLKPSEITPLTALKLAELAKD 211
Query: 172 YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ ++ G L K + TG+ +++ A + +ELGGK
Sbjct: 212 IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGK 271
Query: 230 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
+P +VFD +++ + + N GQ C + I K L+E L +
Sbjct: 272 APVIVFDDA-DIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDV 344
P + +L + + H R+ K +++ K +G K++ GGE+ K APTLL
Sbjct: 330 SGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGA 389
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+D I+ +E+FGP++ + D E + N LA+ ++T +
Sbjct: 390 LQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKD 435
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 6e-46
Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 27/313 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
++ EP GVV +I+PWNYP L++ + P A+AAG A +LKPSE+A + L ++ E
Sbjct: 147 VLREPIGVVGLITPWNYPMLMATWKVAP---ALAAGCAAILKPSELASLTCLELGEICKE 203
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVL 223
+ ++ G E A L DK+ +TG+S +M AAA+ + PV
Sbjct: 204 -----VGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVS 258
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LELGGKSP VVF+ +L A I G + NGQ C + +I + A + L +
Sbjct: 259 LELGGKSPLVVFEDV-DLDKAAEWAIFGCFW-TNGQICSATSRLILHESIATEFLNRIVK 316
Query: 283 ELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IA 337
++N +PLE L +V+ + ++ K + + K G I+ GG R ++ + I
Sbjct: 317 WIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIE 376
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397
PT++ DV + I EE+FGP+L + T E++ D+ N L A + +N+ + ++
Sbjct: 377 PTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436
Query: 398 VETVSAGGLVIND 410
+ AG + +N
Sbjct: 437 TKAFKAGIVWVNC 449
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 3e-45
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 15/286 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
I +P G+V I+PWNYP ++ L P AI GN +V KPSE P ++ LA+L+ +
Sbjct: 157 IRRDPIGIVGSIAPWNYPLMMMAWKLAP---AIGGGNTVVFKPSEQTPLTALKLARLIAD 213
Query: 172 YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 229
+ + V+ G L K + TG+ + V+AAAAK + LELGGK
Sbjct: 214 ILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGK 273
Query: 230 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
+P +V+ +L+ + + N GQ C + I KL+ L + +
Sbjct: 274 APVIVYGDA-DLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIR 331
Query: 289 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDV 344
+++ ++ +++ R++ ++ +I GG ++ PT++
Sbjct: 332 YNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGA 391
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
++ I+ E+FGP++ + +D+ N LA+ ++T +
Sbjct: 392 TQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 5e-45
Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 22/290 (7%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVG 170
P G+V II+ +N+P V G A+ GN + K + S + K++
Sbjct: 154 QWNPVGLVGIITAFNFPVA-----VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIA 208
Query: 171 EYMDLSSI-----RVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLL 224
+ ++ + + + G +A+ D++ + + +TG+++V + V + LL
Sbjct: 209 KVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLL 268
Query: 225 ELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
ELGG + + F+ +L + + G GQ C + + + +++ LK
Sbjct: 269 ELGGNNAIIAFEDA-DLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKA 326
Query: 284 LENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTL 340
NP + + + +++ K G +V+GG+ D+ + PT+
Sbjct: 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTI 386
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ + D+ I E F P+L + E+ F N + L++ +FT +
Sbjct: 387 VTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD 436
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 5e-45
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 21/311 (6%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
IV EP GVV I+PWNYP L + + P A+A G +LV+KPSE+ P ++ + +L+ E
Sbjct: 166 IVKEPVGVVTQITPWNYPLLQASWKIAP---ALATGCSLVMKPSEITPLTTIRVFELMEE 222
Query: 172 YMDLSS--IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
+ I ++ GA +E ++ + D + +TG + +M AA ++T + LELG
Sbjct: 223 -VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 228 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 286
GK+P ++FD + ++A + + G + + GQ C + I+ K ++L + ++
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 287 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPT 339
N ++ ++ ++++ H ++ +D K G I GG+R PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
++ + I+ EE+FGP++ + + +++ + N LA +F+ + Q+
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 400 TVSAGGLVIND 410
+ G + IND
Sbjct: 460 KLKLGTVWIND 470
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 1e-44
Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--- 171
P GV + I WNYP ++ P A+ AGNA+V KPSE P + +A+++ E
Sbjct: 149 VPLGVCVGIGAWNYPQQIACWKAAP---ALVAGNAMVFKPSENTPLGALKIAEILIEAGL 205
Query: 172 ----YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE 225
V++G +T LL K+ TG+ R V AAAA HL V +E
Sbjct: 206 PKGL------FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTME 258
Query: 226 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 284
LGGKSP +VFD +++ A ++G + ++GQ C + + K + LE+LK
Sbjct: 259 LGGKSPMIVFDDA-DIESAVGGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRT 316
Query: 285 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAP 338
E +PL+ L +V+ ++ ++ K G ++ GG N + P
Sbjct: 317 EAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQP 376
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV D I EEIFGP++ +L D ++ N+ LA +FT + + V
Sbjct: 377 TVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436
Query: 399 ETVSAGGLVIN 409
+ + AG L IN
Sbjct: 437 DGLEAGTLWIN 447
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 2e-44
Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
++ EP GVV II+PWN+PF+++ + AI +G +VLKPSE +S LA+L E
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPW---AIGSGCTVVLKPSEFTSGTSIRLAELARE 213
Query: 172 -------YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPV 222
VV G +L + D + +TG+ RV + AA+ + V
Sbjct: 214 AGIPDGV------FNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRV 267
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGK P +VF +L A + G + N GQ CIS ++ + L+E L
Sbjct: 268 GLELGGKGPQIVFADA-DLDAAADGIAYGVYH-NAGQCCISGSRLLVQEGIRDALMERLL 325
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIA 337
+ +PL + + +++ H ++ + SG +++ GGER + L A
Sbjct: 326 DISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYA 385
Query: 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PT+ V D I EEIFGP+L LT +++ + N+ L+A +++ N
Sbjct: 386 PTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTN 438
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 7e-44
Identities = 82/399 (20%), Positives = 156/399 (39%), Gaps = 37/399 (9%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
+ + + R L + L E E ++ + ++ K L S EV
Sbjct: 38 LYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKL-LSESKEEVE------LC 90
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ P K + +A + + GV++ PWN+P +
Sbjct: 91 VSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAP 146
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 194
GN ++LK + P S++L AK++ G + + + + ++ D
Sbjct: 147 NFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL------INLYPSYDQLADIIADP 200
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 253
+ + TG+ R V AA K+L +ELGG +V D + +V + +
Sbjct: 201 RIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDA-DPQVLRNVLNDARTY 259
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 312
N+GQ C S II K ++L LKN N +PLE+ L + + +L
Sbjct: 260 -NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318
Query: 313 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
+ + +G K+ + D PT+L D+ +D+ + +E+FGP+ + V+
Sbjct: 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNA 378
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+ + N + L + + ++ ++ + G VIN
Sbjct: 379 AIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVIN 417
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-43
Identities = 91/399 (22%), Positives = 158/399 (39%), Gaps = 37/399 (9%)
Query: 29 TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
F K S R L+ + + L ++ + +++ KP ++ + EV KS
Sbjct: 41 GFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-IKQARAEVT------KS 93
Query: 89 AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
A + + PE A I P GV+L I PWN+P L V
Sbjct: 94 AALCDWYAEHGPAMLNPEPTLVE----NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVP 149
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 194
+ AGN+ +LK + + ++A+++ G Y V S ++ D
Sbjct: 150 ILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVY------GWVNANNEGVSQMINDP 203
Query: 195 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 253
+ + TG+ R + A A L +LELGG P +V + +L++A + + G++
Sbjct: 204 RIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA-DLELAVKAAVAGRYQ 262
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 312
N GQ C + I + A + +PL + DL + + L +
Sbjct: 263 -NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQ 321
Query: 313 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
+ G +++ GGE+ A T+L DV D +E+FGP+ I
Sbjct: 322 QVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAH 381
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+ + N L+A +FT + L + + GG+ IN
Sbjct: 382 ALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFIN 420
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-43
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 28/309 (9%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GVV + P+N+P L +V A+ AGN +V KPSE+ P + L K
Sbjct: 138 KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197
Query: 169 VGEYMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMA-AAAKHLTPVLLEL 226
V + +V+G AL + D + +TG+SR ++ + + + LE+
Sbjct: 198 V--------LNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEM 249
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNEL 284
GG +P VV + +L A +I + + GQ C ++ + + LL L
Sbjct: 250 GGNNPLVVEEVA-DLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQGAWGDALLARLVAVS 307
Query: 285 ENFY-GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTL 340
G+ + + +++ + L K + G + + + + P
Sbjct: 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPG- 366
Query: 341 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400
+LDV + EE FGPLL ++ + N+ LAA L +++++ +QF+
Sbjct: 367 ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVE 426
Query: 401 VSAGGLVIN 409
AG + N
Sbjct: 427 SRAGIVNWN 435
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 3e-43
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 26/311 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I PWN+P L+ + P A++ GN +V+KP+E P ++ + L+ E
Sbjct: 155 TRSEPVGVCGQIIPWNFPLLMFLWKIGP---ALSCGNTVVVKPAEQTPLTALHMGSLIKE 211
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + +V G A + DK+ +TG++ V +++ AA K +L V
Sbjct: 212 -----AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRV 266
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP +VF +L A G + + GQ CI+ + + + +
Sbjct: 267 SLELGGKSPCIVFADA-DLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSV 324
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
+ + NPL ++ + ++ L++ K G K+ GG NK I P
Sbjct: 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQP 384
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV D I EEIFGP+ I+ ++D N+ L+A +FTN+
Sbjct: 385 TVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVS 444
Query: 399 ETVSAGGLVIN 409
+ +G + +N
Sbjct: 445 SALQSGTVWVN 455
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 3e-43
Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I PWN+P L+ L P A+A GN +V+K +E P ++ +A L+ E
Sbjct: 154 TRHEPVGVCGQIIPWNFPLLMQAWKLGP---ALATGNVVVMKVAEQTPLTALYVANLIKE 210
Query: 172 YMDLSS------IRVVEGAVAET-SALLD-QKWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + +V G +A+ + DK+ +TG++ + R++ AA +L V
Sbjct: 211 -----AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRV 265
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP ++ ++ A + + N GQ + +D + +E
Sbjct: 266 TLELGGKSPNIIMSDA-DMDWAVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSV 323
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
++ NP +SK + V+ F ++ ++ K G K++ GG ++ I P
Sbjct: 324 ARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQP 383
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398
T+ DV I EEIFGP++ IL IE+ N+ T LAA +FT +
Sbjct: 384 TVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443
Query: 399 ETVSAGGLVIN 409
+ + AG + +N
Sbjct: 444 QALQAGTVWVN 454
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 3e-43
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 26/292 (8%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
P G V II+PWN P +LS + P A+A GN +VLKP+E +P +++ LA+++ E D
Sbjct: 161 VPAGPVGIITPWNAPLMLSTWRIAP---ALAFGNTVVLKPAEWSPFTATKLAEILKE-AD 216
Query: 175 LSS--IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 230
L +V+G E A L + TG + +IVM AA HL + ELGGKS
Sbjct: 217 LPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKS 276
Query: 231 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 289
P +VF +L+ A ++ + NG+ C + ++ + + +
Sbjct: 277 PALVFADA-DLERALDAVVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRV 334
Query: 290 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAP 338
+PL+ + ++ +++ H R+ ++ K G +++ GGER K R + P
Sbjct: 335 GHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLP 394
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T+ + I EEIFGP+L + E++ N LAAY+FT +
Sbjct: 395 TVFVGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRD 445
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 4e-43
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 32/313 (10%)
Query: 118 EPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE--- 171
EP GV I WNYPF+++ P A+A GNA+V KPS + P + +LA++ E
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAP---ALACGNAVVFKPSPMTPVTGVILAEIFHEAGV 210
Query: 172 ----YMDLSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ VV+G S L K+ +TG+ + VM +AK + V LEL
Sbjct: 211 PVGL------VNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLEL 264
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGKSP ++F L+ A R +M + GQ C + + ++ P+ LE + +
Sbjct: 265 GGKSPLLIFKDC-ELENAVRGALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-------I 336
+PL ++ + +++ ++ + K G +++ GGE +
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
+P +L + D + EEIFGP++ +L D E+ N+ T LA+ +FT + +
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 397 FVETVSAGGLVIN 409
+ AG IN
Sbjct: 443 VAANLEAGTCYIN 455
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 4e-42
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 22/287 (7%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------G 170
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V G
Sbjct: 141 RALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRG 200
Query: 171 EYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+V G L + K + TG+ +MA AAK++T V LELGG
Sbjct: 201 ------VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGG 254
Query: 229 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 287
K+P +V D +L++A + ++ + N+GQ C + + K + + L ++
Sbjct: 255 KAPAIVMDDA-DLELAVKAIVDSRVI-NSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAV 312
Query: 288 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLD 343
NP E D++ ++N+ R+ + + G ++ GG+ + PTLLLD
Sbjct: 313 QFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLD 372
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
V ++ IM EE FGP+LP++ D +ED+ + N L + ++T N
Sbjct: 373 VRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-41
Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 18/311 (5%)
Query: 113 AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
EP GV +I+PWN+P +S+ AI GN +V KPS + L +L E
Sbjct: 660 NHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA 719
Query: 173 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVL 223
+ G + L I +TG+ ++ AAK ++ ++
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 224 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 283
E+GGK+ ++ D +L A ++ +G GQ C + +I K +E L +
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSM 838
Query: 284 LENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-IAPTLL 341
+ + + + + + + + K G +++ + + T++
Sbjct: 839 AKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTII 898
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKLKQQFV 398
+ + I EEIFGP+L ++ + + + NS L +F+ + + +
Sbjct: 899 GGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA---LTGGIFSRSPEHLAKAR 955
Query: 399 ETVSAGGLVIN 409
G L IN
Sbjct: 956 REFRVGNLYIN 966
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 9e-41
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 28/313 (8%)
Query: 115 IVPEPFGVVLIISPWNYPFLLS---LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE 171
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L +
Sbjct: 174 TKKEPVGVCGIVIPWNYPLMMLSWKTAA---CLAAGNTVVIKPAQVTPLTALKFAELTLK 230
Query: 172 YMDLSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPV 222
+ + ++ G+ + L KI +TG++ V + +M + A ++ V
Sbjct: 231 -----AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKV 285
Query: 223 LLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK 281
LELGGKSP ++F +L A + + + N G+ CI+ + + + ++ +
Sbjct: 286 SLELGGKSPLIIFADC-DLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 282 NELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAP 338
E+E NPLE + + H +L + G +V GG + P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILT--VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396
T+ DV I EE FGP++ I ++ N+ LA+ +FT +
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 397 FVETVSAGGLVIN 409
+ + AG + IN
Sbjct: 464 VSDKLQAGTVFIN 476
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 56/403 (13%), Positives = 141/403 (34%), Gaps = 36/403 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI---YEVALLKT--SIKSALKELKH 95
R ++L ++K+L + D + +S++ + L + ++L E+
Sbjct: 68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHA 127
Query: 96 WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
S S+ ++ GV L I+ +N+P + A+ +G +++KP+
Sbjct: 128 LRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187
Query: 156 EVAPASSSLLAKLVGEYMDL--SSIRVVEGAVAET-SALLDQKWDKICYTGNSRVARIVM 212
+ + V + L ++ ++ G+ A + D + +TG++ A +
Sbjct: 188 TATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSF--DVVSFTGSADTAATLR 245
Query: 213 AAAAK--HLTPVLLELGGKSP-VVFD----SGINLKVACRRMIMGKWGCNNGQACISPDH 265
A A + ++ + ++ + + ++ +GQ C +
Sbjct: 246 AHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRR 304
Query: 266 IITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 323
+ +LE+LK +L NP ++ + +V+ + + + +
Sbjct: 305 AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLA 364
Query: 324 VHGGERDKNKLR------IAPTLLL--DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD-- 373
+AP L + D +L+ E+FGP+ + D+
Sbjct: 365 YDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424
Query: 374 ------IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
+ G L A +++N+ + ++ ++
Sbjct: 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHA 467
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 3e-40
Identities = 58/321 (18%), Positives = 114/321 (35%), Gaps = 36/321 (11%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVG-----AIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
G V + N+P S G A+AAG +++K P +S ++A+ + +
Sbjct: 135 IALGPVAVFGASNFPLAFS---AAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQA 191
Query: 173 MDLSSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--L 223
+ + +++G L + + +TG+ R + A + P+
Sbjct: 192 LKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFY 251
Query: 224 LELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLK 281
ELG +P +F S + K + GQ C P + +E+ +
Sbjct: 252 GELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQ 311
Query: 282 NELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL 341
+ + ++P S L+ + ++ +++ DD + + +A L
Sbjct: 312 SLIR---QQSP--STLLTPGIRDSYQSQVVSRGSDDGI--DVTFSQAESP---CVASALF 361
Query: 342 L---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK--QQ 396
+ + R EEIFGP I+ + + D + L A + + Q
Sbjct: 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQ 421
Query: 397 FVETVS--AGGLVINDTAVHV 415
+ + AG LV N V
Sbjct: 422 LIPRLEEIAGRLVFNGWPTGV 442
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 9e-39
Identities = 50/306 (16%), Positives = 109/306 (35%), Gaps = 22/306 (7%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
V P GVV + P P + + +I AGN++V P A + +++ E +
Sbjct: 105 VAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEK 164
Query: 176 SS-----IRVVEGAVAE-TSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ I + + T L+ I TG S + + AA TP + G
Sbjct: 165 AGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK----AAYSSGTPAIGVGPG 220
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
P + N+ A + ++ K +NG C S ++ + ++ + + +
Sbjct: 221 NGPAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERVNKEAVIAEFRK--QGAH 277
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 347
+ E+ L + + + + ++ + ++ IA
Sbjct: 278 FLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE---TKVGA 334
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
+ S E P+L T + +++ DI+ + + +K++ ++F
Sbjct: 335 KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPV 394
Query: 404 GGLVIN 409
L++N
Sbjct: 395 SRLLVN 400
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-37
Identities = 58/314 (18%), Positives = 112/314 (35%), Gaps = 35/314 (11%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+ EP G++ I P P ++ + ++ N ++ P A S++ AKLV +
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159
Query: 176 SS-----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 228
+ I ++ E S L I TG + + AA P + G
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAG 215
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 288
PVV D ++K A ++M K +NG C S +I + ++ E + +
Sbjct: 216 NVPVVIDETADIKRAVASVLMSKTF-DNGVVCASEQAVIVVDEVYDEVKERFASHKAHV- 273
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH------GGERDKNKLRIAPTLLL 342
+ ++ + +++ + K+ G+ G + + + L
Sbjct: 274 -LSKTDADKVRKVLLIDGALN-------AKIVGQPATAIAEMAGVKVPADTKVLIGEGLG 325
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD----IINSGTKPLAAYLFTNNKKLKQ--- 395
V D + E P L + D ED+ ++ G + L+TN
Sbjct: 326 KVSYDDAF-AHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIR 384
Query: 396 QFVETVSAGGLVIN 409
F + + ++IN
Sbjct: 385 YFGDKMKTARILIN 398
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 3e-36
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 29/292 (9%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P +++ L ++
Sbjct: 147 VPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDG 206
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + V+ G + L I TG++ + + +A+++TPV+LEL
Sbjct: 207 V--------LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLEL 258
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GGK+P VV D +L A + G++ N GQ C + + + + ++
Sbjct: 259 GGKAPMVVMDDA-DLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVK 316
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-----AP 338
+P+++ + N + ++ + G + GG+ + P
Sbjct: 317 GLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEP 376
Query: 339 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
T+L+DV +D++++ EE FGP+LPI+ V +E + + N L+AY+ T +
Sbjct: 377 TVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 5e-35
Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 16/302 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 174
GV + ISPWN+P + L V A+ AGN++V KP+E P + L+ E
Sbjct: 648 RGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKS 707
Query: 175 LSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKS 230
+ +G + AL + +TG++ VAR + A A + P++ E GG +
Sbjct: 708 ALYLVTGDGRIGA--ALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGIN 765
Query: 231 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 290
++ D+ + ++ + + GQ C + + +D A +++E +
Sbjct: 766 AMIADATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824
Query: 291 NPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSL 349
+P + + + +++ RL + K ++ G + +AP +
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELTEAG-- 881
Query: 350 IMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
++EE+FGP+L ++ + +E I L + + + ++ V G +
Sbjct: 882 QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIY 941
Query: 408 IN 409
+N
Sbjct: 942 VN 943
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 5e-34
Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 25/288 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV I+PWN+P + A+AAG +VLKP+ P S+ LA+L
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAG 203
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V VV G+ L + K+ +TG++ + R +M AK + V LEL
Sbjct: 204 V--------FNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A + K+ N GQ C+ + + + E L+ +
Sbjct: 256 GGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 342
+ + L++ + +++ A++ + + D G ++V GG+ ++ PT+L+
Sbjct: 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILV 373
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
DVP ++ + EE FGPL P+ D N LAAY + +
Sbjct: 374 DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD 421
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 5e-34
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 25/288 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
EP GV I+PWN+P + V A+AAG +V+KP+E P S+ +A L
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKG 206
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V + VV G + + K+ +TG++ V R++MA +A + + LEL
Sbjct: 207 V--------LSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A I K+ NNGQ C+ + + + L +
Sbjct: 259 GGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 342
ES L ++N ++ + D G ++ GG+R PT+L
Sbjct: 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLT 376
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
V D + EE FGPL P+ E+ + N LAAYL++ +
Sbjct: 377 GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 7e-34
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 26/289 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
P GV +I PWN+P + + A+AAG V+KP+ P + +
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDG 205
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
+ + +V G + +L + + +TG++ V R ++ A+ + + LEL
Sbjct: 206 M--------VNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L+ A +I K+ GQ C+ + I + A + L +
Sbjct: 258 GGNAPFIVFDDA-DLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVN 315
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK--NKLRIAPTLL 341
+ + D+ ++N F ++ + L D G +V G + + + L PT++
Sbjct: 316 KMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVV 375
Query: 342 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
V R+ EE FGPL+P+ E+ D N LA+Y+FT +
Sbjct: 376 QGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD 424
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-33
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 25/287 (8%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV I+PWN+P + A+AAG ++++P+++ P ++ L L
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAG 226
Query: 169 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226
V +++V G E A L + K+ +TG++ V R++MA A + + LEL
Sbjct: 227 V--------LQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278
Query: 227 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 285
GG +P +VFD +L A ++ K+ N GQ C+ + I + K E L +++
Sbjct: 279 GGNAPFIVFDDA-DLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336
Query: 286 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLD 343
N E + ++ ++ ++D G K++ GG+ L P +L
Sbjct: 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTG 395
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
V D L+ EE FGPL P+ D E+ N LAAY +T N
Sbjct: 396 VTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN 442
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 55/320 (17%), Positives = 106/320 (33%), Gaps = 38/320 (11%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDP--VVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 172
+V P G V + N+P S A+AAG +V+K P + ++A+ V
Sbjct: 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAA 224
Query: 173 MDLSSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--L 223
+ + + +++G + L + +TG+ R + A P+
Sbjct: 225 IRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFF 284
Query: 224 LELGGKSPVVFDSGINLKVAC---RRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLES 279
ELG +P+ A + GQ C +P + + A + +
Sbjct: 285 GELGSVNPMFLLPEALKARAETLGQGWAGSLTM-GAGQFCTNPGIAVVIEGADADRFTTA 343
Query: 280 LKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 339
L + L + + ++ + V K + E P
Sbjct: 344 AVEALAKVAPQTMLTDG-----IAKAYRDGQARFATRNAV--KPLLATESSGRDAS--PN 394
Query: 340 LLLDVPRDSL---IMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKL 393
L L + EE+FGPL ++ V + ++ L A + + L
Sbjct: 395 LFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQ---LTATIHMDAGDL 451
Query: 394 KQ----QFVETVSAGGLVIN 409
+ + V AG +++N
Sbjct: 452 ETARRLRPVLERKAGRVLVN 471
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-32
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 168
+P GV +I+PWN+P + V A+AAG +V+KP+E P S+ LA+L
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSG 204
Query: 169 VGEYMDLSSIRVVEGAVAETSA-----LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVL 223
V V+ + D KI +TG++ +I++ AA + V
Sbjct: 205 V--------YNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256
Query: 224 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLE 278
+ELGG +P +VFDS N+ A + K+ N GQ C+ + + + + E
Sbjct: 257 MELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAE 314
Query: 279 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRI 336
++K L G E ++N ++ K ++D G +V GG+R K
Sbjct: 315 AMKKNLRVGNGFE--EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFF 372
Query: 337 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PTLL +V +D L EE FGPL P++ D E++ I N+ LA Y ++ +
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 4e-29
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 15/302 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
P GVV I+P+N+P ++ P+ AIA GN +LKPSE P + L +L + L
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEK-AGL 196
Query: 176 SS--IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
VV GA + +L+ K I + G+ V V +++L V G K+
Sbjct: 197 PKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHT 256
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKN 291
+ + NL+ ++ +G G+ C++ + + A + + L+ ++ + G
Sbjct: 257 IVLNDANLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNG 315
Query: 292 PLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRD 347
+ L ++ ++ R ++ G ++V G R+ + + PT+ +V +
Sbjct: 316 LDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDG-RENVSDDGYFVGPTIFDNVTTE 374
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I +EIF P+L ++ V ++++ +I N A LFT+N + F E + AG L
Sbjct: 375 MTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434
Query: 408 IN 409
IN
Sbjct: 435 IN 436
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 7e-28
Identities = 66/309 (21%), Positives = 127/309 (41%), Gaps = 21/309 (6%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 179
G V ISP+N+ + + GN ++ KPS+ A +S + +++ E + + I+
Sbjct: 202 GFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260
Query: 180 VVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSP 231
V + + I +TG+ + + A + + E GGK+
Sbjct: 261 FVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNF 320
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 291
S ++ + + GQ C + + K P++ L E +
Sbjct: 321 HFVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGD 379
Query: 292 PLE--SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNK-LRIAPTLLLDVPR 346
P E S ++++ FAR+ K L+ + S + GG+ +++ + P ++
Sbjct: 380 PAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDP 439
Query: 347 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV-- 401
IM EEIFGP+L + DK ++ +++S T L +F +K + Q+ +
Sbjct: 440 QEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRN 499
Query: 402 SAGGLVIND 410
+AG IND
Sbjct: 500 AAGNFYIND 508
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-25
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 19/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+P G+ I+P+N+P ++ + AIA GNA +LKPSE P+ LA+L+ E L
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAP--AIACGNAFILKPSERDPSVPIRLAELMIE-AGL 217
Query: 176 SS--IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ + VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 218 PAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHM 277
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT-KDYAPKLLESLKNELENF-YGK 290
+ +L A +I +G G+ C++ + ++ A +L++ L +E+ G
Sbjct: 278 IIMPDADLDQAANALIGAGYGSA-GERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336
Query: 291 NPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLD 343
E D+ +V R+ L+D G K+V G RD +N I L D
Sbjct: 337 YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDD 395
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
V D I EIFGP+L ++ E++ + ++T + + F ++
Sbjct: 396 VTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINI 455
Query: 404 GGLVIN 409
G + +N
Sbjct: 456 GMVGVN 461
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 8e-10
Identities = 59/378 (15%), Positives = 106/378 (28%), Gaps = 132/378 (34%)
Query: 16 AEAASLFVKE-LRGTFASGKTKSYGWRVSQLKSLMK---MLNEREPDIVDALRQD---LD 68
E FV+E LR +Y + +S +K+ + M+ + D L D
Sbjct: 76 EEMVQKFVEEVLR--------INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 69 KPELESSIYEVALLK--TSIKSALKEL---------------KHWMTPEKAKTSITTFPS 111
K Y V+ L+ ++ AL EL K W+ +
Sbjct: 128 K-------YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL-------- 172
Query: 112 SAEIVPE-PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
S ++ + F + W L+L N P V LL ++
Sbjct: 173 SYKVQCKMDFKIF-----W-----LNL---------KN--CNSPETVLEMLQKLLYQIDP 211
Query: 171 EYMDLSS-----IRVVEGAVAETSALLDQK------------WD-KI-------C----Y 201
+ S + AE LL K + K C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 202 TGNSRVARIVMAAAAKHLTPVLLELG---GKSPVVFDSGINLKVAC-RRMIMGKWGCNNG 257
T +V + AA H++ + + + ++ + R
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----------- 320
Query: 258 QAC-ISP-----------DHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSN 305
+ +P D + T ++ + L +E+ N LE + +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL--NVLEPAEYRK----- 373
Query: 306 HFARLSKLLDDDKVSGKI 323
F RLS + +
Sbjct: 374 MFDRLSVFPPSAHIPTIL 391
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 8e-10
Identities = 74/456 (16%), Positives = 130/456 (28%), Gaps = 139/456 (30%)
Query: 23 VKELR--------GTFASGKT-------KSYG----------W----RVSQLKSLMKMLN 53
+ ELR G SGKT SY W + +++++ML
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 54 ----------EREPDIVDALRQDLD--KPEL----ESSIYEVALLKTSIKSALKELKHWM 97
D ++ + + EL +S YE LL + ++ K W
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLNVQNAKAW- 259
Query: 98 TPEKA-----KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152
A K +TT V +S +SLD L
Sbjct: 260 ---NAFNLSCKILLTTRFKQ---------VTDFLSA-ATTTHISLDHHSMT--------L 298
Query: 153 KPSEVAPASSSLLAKLVG-EYMDLSSIRVVEG---AVAETSALLDQ---KWDKICYTGNS 205
P E SLL K + DL V+ ++ + + WD +
Sbjct: 299 TPDE----VKSLLLKYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 206 RVARIVMAAAAKHLTPVLLELGGKSPVVF--DSGINLKVACR----------RMIMGKWG 253
++ I + ++ L P VF + I + +++ K
Sbjct: 354 KLTTI-IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK-- 410
Query: 254 CNNGQACI---SPDHIITTKDYAPKLLESLKNE-------LENFYGKNPLESKDLSRIVN 303
+ + + + I+ +L L+NE ++++ +S DL
Sbjct: 411 LHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
Query: 304 SN--------H---------FARLSKL-LDDDKVSGKIVHGGERDKNKLRIAPTLL-LDV 344
H + LD + KI H I TL L
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 345 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 380
+ + ++ + L V+ I D F +
Sbjct: 530 YKPYICDNDPKYERL-----VNAILD-F-LPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 4e-07
Identities = 65/403 (16%), Positives = 129/403 (32%), Gaps = 135/403 (33%)
Query: 58 DIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP 117
D+ D + L K E++ + + K ++ L+ W K + + F
Sbjct: 37 DVQDMPKSILSKEEID----HIIMSKDAVSGTLRLF--WTLLSKQEEMVQKF-------- 82
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
V ++ NY FL+S + E S
Sbjct: 83 ----VEEVLRI-NYKFLMS------------------------------PIKTEQRQPS- 106
Query: 178 IRVVEGAVAETSALLDQKWDKICYTGNSR-----VARIVMA----AAAKHLTP---VLLE 225
T ++Q+ D++ Y N V+R+ A L P VL++
Sbjct: 107 --------MMTRMYIEQR-DRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156
Query: 226 --LG-GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 282
LG GK+ V D ++ KV C+ W N C SP+ ++ ++L+ L
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFW-LNLKN-CNSPETVL-------EMLQKLLY 207
Query: 283 ELENFYGKNPLESKDLSRIVNSNHFARLSKL------------LDDDKVSGKIVHGGERD 330
+++ + S ++ ++S A L +L L + V ++
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQ-AELRRLLKSKPYENCLLVLLN--V---------QN 255
Query: 331 KNKLRI----APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP----- 381
LL R + ++ + +++D + T
Sbjct: 256 AKAWNAFNLSCKILLTT--RFKQV-TDFLSAATTTHISLDHHSMTL------TPDEVKSL 306
Query: 382 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLALLKNH 424
L YL + L ++ V T + ++ I+ +++
Sbjct: 307 LLKYLDCRPQDLPRE-VLTTNP--RRLS------IIAESIRDG 340
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 434 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 96.61 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 85.93 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-91 Score=705.08 Aligned_cols=422 Identities=24% Similarity=0.315 Sum_probs=390.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999766799999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+....... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQIPL----RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEEEEE----ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCccccc----cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 99999998887654432111 13456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHH-HHhcccCceEEecCCCCceEEcCCCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~-~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
.+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+ .+.+++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999999 999999999994 67889999997 999999999999988876 55667899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 345 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred -hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 319 -VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 319 -~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+|+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~ 425 (490)
T 2wme_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence 688999999863 25899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||++..+. ..| +..|.||+||+.
T Consensus 426 ~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~ 465 (490)
T 2wme_A 426 RAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGREN 465 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchh
Confidence 99999999999999999865433 222 567999999983
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-88 Score=685.70 Aligned_cols=420 Identities=19% Similarity=0.284 Sum_probs=393.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++..... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999999998876543221 3467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.|++++.++ +|+|++|+++|+.+ .+. |+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 99999999999654 466 99987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 67899999975 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 406 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 440 (484)
T 3ros_A 406 SAQIETGMTVINGRWITSGELPFGGIKKSGYGREL 440 (484)
T ss_dssp HHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBS
T ss_pred HHhCccceEEECCCCCCCCCCCcCCcCcccCCcCc
Confidence 999999999999954332 122 567889999873
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-89 Score=689.50 Aligned_cols=423 Identities=19% Similarity=0.283 Sum_probs=393.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999447999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+..... +. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 129 ~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPAA-GE--YLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEECB-EE--EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cC--CcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 999999998887544321 11 113456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 557889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999995 6
Q ss_pred CC-eeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 SG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~~-~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 77 99999976 34799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..|.||+||+.
T Consensus 445 a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 479 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDM 479 (498)
T ss_dssp HHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBS
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccc
Confidence 999999999999977654 122 567889999873
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=686.56 Aligned_cols=422 Identities=24% Similarity=0.331 Sum_probs=390.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~l~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGDTL-PT--PDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEEEE-CC--SSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCccc-cc--cCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999888776433221 11 112456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999999 999999999984 57889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 351 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA 351 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 431 (484)
T 3ifg_A 352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431 (484)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 678999999864 3699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+..... ..| +..|.||+||+.
T Consensus 432 ~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~ 466 (484)
T 3ifg_A 432 AEALEYGMVGINTGLISNEVAPFGGVKQSGLGREG 466 (484)
T ss_dssp HHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBS
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCc
Confidence 999999999999854321 222 667999999983
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-88 Score=687.30 Aligned_cols=420 Identities=21% Similarity=0.306 Sum_probs=393.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEee-ecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.++++.+... +.. .+...++++ +|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHTI-PEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEEC-SCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCccc-ccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 999999999988765432 111 245678888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 999999999994 57889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++|+++.
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 349 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred -hCCeeeecCcc-CC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 -VSGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 -~~~~v~~gg~~-~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+|+++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 429 (506)
T 3rh9_A 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429 (506)
T ss_dssp HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 67899999975 33 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 396 QFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++++|+|+||+++.+.. .| +..+.||+||+
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~ 465 (506)
T 3rh9_A 430 RVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGRE 465 (506)
T ss_dssp HHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcC
Confidence 999999999999999765432 22 56788999987
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-88 Score=687.85 Aligned_cols=422 Identities=22% Similarity=0.327 Sum_probs=393.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~--~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|+++++++|++|| +.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence 678899999999999999999999999 899999999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++...+.+.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMI-DSP--IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEE-CCS--STTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCeec-ccC--CCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 99999999998877654321 111 124567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 567899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 371 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999999
Q ss_pred h-hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 318 K-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 318 ~-~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 451 (520)
T 3ed6_A 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI 451 (520)
T ss_dssp HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 5 677999999763 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++++++|+|+||+.+.+. ..| +..|.||+||+.
T Consensus 452 ~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~ 492 (520)
T 3ed6_A 452 GKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGREL 492 (520)
T ss_dssp HHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccc
Confidence 999999999999999999976553 222 567899999884
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-88 Score=685.84 Aligned_cols=425 Identities=26% Similarity=0.395 Sum_probs=393.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e 78 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 5788999999999999999999999999 99999999999999999999999999999999999999999996 69
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCC
Q 013901 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (434)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~ 158 (434)
+..+++.+++++...+.+.+...........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999999888765442221111124567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 159 ~~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
|.++..+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999999 999999999995 57888999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 349 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 488999999999999999999
Q ss_pred HHhh-hCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 315 DDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
+++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|
T Consensus 350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 429 (503)
T 3iwj_A 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429 (503)
T ss_dssp HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9995 678999999764 469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
.++++++++++++|+|+||++.... ..| +..+.||+||++
T Consensus 430 ~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 471 (503)
T 3iwj_A 430 LERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGREL 471 (503)
T ss_dssp HHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBS
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcc
Confidence 9999999999999999999864322 122 567899999874
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-88 Score=677.58 Aligned_cols=421 Identities=30% Similarity=0.536 Sum_probs=385.3
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+
T Consensus 14 ~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~ 93 (457)
T 3lns_A 14 HIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93 (457)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHH
T ss_pred CCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999976799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.++++.++..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 94 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 173 (457)
T 3lns_A 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS 173 (457)
T ss_dssp HHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999999988765433322222356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 163 SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 163 ~~l~~~~~~alp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
..+++++.+++|+|++|+++|+.+.+..|+++++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.
T Consensus 174 ~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~ 253 (457)
T 3lns_A 174 AVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQ 253 (457)
T ss_dssp HHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHH
Confidence 99999999999999999999988888999986699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCe
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~ 322 (434)
|++.+++++| .|+||.|+++++||||++++++|+++|++++++++ |.++ ++||++++++++++.++++++. ++
T Consensus 254 Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a~--~~ 326 (457)
T 3lns_A 254 TVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEATQ--GQ 326 (457)
T ss_dssp HHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHCC--SE
T ss_pred HHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhcC--Ce
Confidence 9999999999 99999999999999999999999999999999987 6555 9999999999999999999763 69
Q ss_pred eeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHhhc
Q 013901 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETV 401 (434)
Q Consensus 323 v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~i~t~d~~~~~~~~~~~ 401 (434)
+++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ +++||+++|||+|.++++++++++
T Consensus 327 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l 406 (457)
T 3lns_A 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI 406 (457)
T ss_dssp EEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS
T ss_pred EEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC
Confidence 9999987667999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ceeeEEECCCchhhhhh----hhhhhcCCCCcc
Q 013901 402 SAGGLVINDTAVHVIML----ALLKNHTLLRSC 430 (434)
Q Consensus 402 ~~g~v~iN~~~~~~~~~----~~~~~~~~~~~~ 430 (434)
++|+|+||+++++...+ +..|.||+||+.
T Consensus 407 ~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~ 439 (457)
T 3lns_A 407 QSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYH 439 (457)
T ss_dssp CCSEEEESCCSGGGGCTTSCBCCCGGGEECCBS
T ss_pred CcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCc
Confidence 99999999987665433 556889999873
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-88 Score=681.66 Aligned_cols=420 Identities=22% Similarity=0.337 Sum_probs=388.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEe-eecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.+..+..+... ..+...+++ ++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999888765432211 013456778 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 557889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999985
Q ss_pred -hCCeeeecCc-cCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 -VSGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 -~~~~v~~gg~-~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||. ... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 442 (497)
T 3i44_A 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442 (497)
T ss_dssp HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 6789999994 332 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
++++++++++|+|+||........| +..|.||+||+.
T Consensus 443 a~~~a~~l~aG~V~iN~~~~~~~~PfGG~k~SG~Gr~~ 480 (497)
T 3i44_A 443 CRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREG 480 (497)
T ss_dssp HHHHHHHSCCSEEEETTCCCCTTCCBCCSGGGCCCCBS
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcCCccc
Confidence 9999999999999999633222223 567999999873
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-88 Score=686.09 Aligned_cols=421 Identities=21% Similarity=0.338 Sum_probs=390.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+..... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 136 ~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGDTI-PA--PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEEEE-CC--SSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cc--ccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 999999888766433221 11 112356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999999 999999999984 57889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 371 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS 371 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999995
Q ss_pred hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 319 ~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
+|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 67899999976 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||+..... ..| +..|.||+||+.
T Consensus 451 ~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 484 (504)
T 3ek1_A 451 EALEYGMVGHNTGLISNEVAPFGGVKQSGLGREG 484 (504)
T ss_dssp HHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCC
Confidence 99999999999865322 223 667999999973
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-88 Score=686.48 Aligned_cols=425 Identities=20% Similarity=0.274 Sum_probs=391.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
+++.+++++++++.+.+.. .+... .......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ 219 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence 9999999999888765532 11110 011225689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++
T Consensus 220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence 999999999999 999999999994 56789999997 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999995 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHHhcCCCCcEEEEecCCH
Q 013901 316 DDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
++. +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++|+++|||+++|||+|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 985 6789999998643 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++++++|+|+||++.... ..| +..|.||+||+.
T Consensus 459 ~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~ 499 (517)
T 2o2p_A 459 NKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499 (517)
T ss_dssp HHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBS
T ss_pred HHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccC
Confidence 999999999999999999865321 223 567899999873
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-87 Score=681.48 Aligned_cols=421 Identities=23% Similarity=0.334 Sum_probs=391.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 124 ~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSGQH-IQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCEEE-EECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCCc-ccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999988775422 1111 2346788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999999 99999999998447788999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++. +
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999996 4889999999999999999999985 6
Q ss_pred CCeeeecCccC-------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 320 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 320 ~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 78999999764 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 439 ~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~ 478 (503)
T 1a4s_A 439 RAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccc
Confidence 99999999999999999866432 223 567899999873
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-88 Score=677.53 Aligned_cols=414 Identities=41% Similarity=0.689 Sum_probs=380.6
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
.+.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++..+++++
T Consensus 12 ~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 12 PRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44567779999999999999999999999999999999999999999999999999999999997679999999999999
Q ss_pred HHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~ 170 (434)
+.++.|..+..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 99988876543332222234568899999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHH
Q 013901 171 EYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250 (434)
Q Consensus 171 ~alp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~ 250 (434)
+++|+|++|+++|+.+.+..|+.|++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.++++
T Consensus 172 ~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 172 QYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp HHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred HhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 99999999999998777788888889999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCcc
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~ 329 (434)
+| .|+||.|+++++||||++++++|+++|++++++++ |+| ++++++||++++.+++++.+++ +|+++++||..
T Consensus 252 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 99 99999999999999999999999999999999985 665 5689999999999999999998 58899999987
Q ss_pred CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEC
Q 013901 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (434)
Q Consensus 330 ~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN 409 (434)
+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 76899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhh----hhhhhcCCCCcc
Q 013901 410 DTAVHVIML----ALLKNHTLLRSC 430 (434)
Q Consensus 410 ~~~~~~~~~----~~~~~~~~~~~~ 430 (434)
+...|...+ +..|.||+||+.
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~ 430 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYH 430 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBS
T ss_pred CCCCCCCCCCCCcCCccccccCccc
Confidence 987665433 567999999983
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-87 Score=680.79 Aligned_cols=423 Identities=22% Similarity=0.313 Sum_probs=390.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~ 126 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999733999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 127 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 203 (495)
T 1wnd_A 127 DVFRFFAGAARCLNGLAA-GEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203 (495)
T ss_dssp HHHHHHHHHTTCCEEECB-EEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHH
Confidence 999999998887654321 111 12335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 204 ~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~ 283 (495)
T 1wnd_A 204 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 283 (495)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHH
Confidence 99999999999999999999 567889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 284 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 284 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999996 4889999999999999999999985 5
Q ss_pred C-CeeeecCc-cCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~-~~v~~gg~-~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
| +++++||. .+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 363 G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 442 (495)
T 1wnd_A 363 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442 (495)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 6 79999997 544699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 443 ~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~ 477 (495)
T 1wnd_A 443 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 477 (495)
T ss_dssp HHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccc
Confidence 999999999999865321 222 557888998873
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-87 Score=683.75 Aligned_cols=421 Identities=21% Similarity=0.336 Sum_probs=390.1
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999997 59999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++++++.+..+......... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 999999985555444332211 24567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc------cCceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~------~~p~~~e~gG~~~~iv~ 235 (434)
+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++++ +||+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999998 99999999999 567889999997 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 588999999999999999999
Q ss_pred HHhhhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 456 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH 456 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence 99964339999998754 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh---hhh-hhhhhcCCC-Ccc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV---IML-ALLKNHTLL-RSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~---~~~-~~~~~~~~~-~~~ 430 (434)
++++++++++|+|+||+..++. ..| +..+.||+| |+.
T Consensus 457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 9999999999999999533332 222 667899999 873
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-87 Score=680.02 Aligned_cols=421 Identities=23% Similarity=0.301 Sum_probs=391.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 6788999999999999999999999999 8999999999999999999999999999999999999999987667999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.+++.++++++.++++.++.. .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRTI-PM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCee-ec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 999999999999988765421 11 12345688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999999 99999999999 567889999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 359 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 359 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (501)
T 1bxs_A 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439 (501)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence 985 678999999763 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||++.... ..| +..+.||+||+
T Consensus 440 a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~ 477 (501)
T 1bxs_A 440 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRE 477 (501)
T ss_dssp HHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCcc
Confidence 9999999999999999865321 222 45788888887
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-87 Score=683.38 Aligned_cols=421 Identities=25% Similarity=0.336 Sum_probs=392.2
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~--~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
++.+++++..+..++++++++|++|| ..|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 78899999999999999999999999 78999999999999999999999999999999999999999999 4799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.++++.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEGQTH-NNI--GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCEEEE-CCS--CTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCeee-ccC--CCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999887754221 111 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 667899999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 363 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 4789999999999999999999985
Q ss_pred -hCCeeeecCccCC--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 -VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 -~~~~v~~gg~~~~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 443 (528)
T 3u4j_A 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL 443 (528)
T ss_dssp HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence 6789999998644 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+++... ..| +..+.||+||+.
T Consensus 444 ~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 480 (528)
T 3u4j_A 444 QTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480 (528)
T ss_dssp HHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCc
Confidence 99999999999999975432 122 567889999873
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-88 Score=682.92 Aligned_cols=422 Identities=20% Similarity=0.298 Sum_probs=392.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++..++++.+.... . ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDILP-S--DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEEEE-C--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc-c--CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999999988877654321 1 123456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|+||+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999999 99999999999 557889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 351 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK 351 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5789999999999999999999995
Q ss_pred hCCeeeecCcc--C-C--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~--~-~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++
T Consensus 352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 431 (497)
T 3k2w_A 352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431 (497)
T ss_dssp HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence 68899999973 2 2 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++++++|+|+||+++.+.. .| +..|.||+||+.
T Consensus 432 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~ 470 (497)
T 3k2w_A 432 INQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGED 470 (497)
T ss_dssp HHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBS
T ss_pred HHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccc
Confidence 99999999999999999876642 12 456899999873
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-87 Score=680.85 Aligned_cols=421 Identities=24% Similarity=0.311 Sum_probs=391.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 6788999999999999999999999999 8999999999999999999999999999999999999999988667999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.+++.++++++.++++.++.. +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKTI-PI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCcce-ec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 999999999999888765421 11 12345688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..|++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999999 99999999999 567889999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 358 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN 358 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 438 (500)
T 1o04_A 359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438 (500)
T ss_dssp HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 985 678999999764 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||++.... ..| +..+.||+||+
T Consensus 439 a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~ 476 (500)
T 1o04_A 439 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476 (500)
T ss_dssp HHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCcc
Confidence 9999999999999999865321 222 45788888887
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-87 Score=681.21 Aligned_cols=422 Identities=25% Similarity=0.333 Sum_probs=390.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..++++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++++++.++++.+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 113 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTE-TRT---GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEE-EEE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCc-ccC---CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 9999999998888776532 111 123356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999999 99999999999767899999986 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 347 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI 347 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred -hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 -VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 -~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (495)
T 3b4w_A 348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427 (495)
T ss_dssp HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 5779999997643 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||++......| +..+.||+||+.
T Consensus 428 ~~~~~~l~aG~V~iN~~~~~~~~PfGG~k~SG~Gr~~ 464 (495)
T 3b4w_A 428 IKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGREN 464 (495)
T ss_dssp HHHHHHSCCSCCEESSCCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCcCccc
Confidence 999999999999999865111222 457888888873
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-87 Score=679.64 Aligned_cols=421 Identities=20% Similarity=0.307 Sum_probs=391.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 378899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++..... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEVV--PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccc--CCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 999999999988876432101 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999 99999999999 567889999997 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i 314 (434)
++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|++++++||++++.+++++.++|
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999995589999999999999999999
Q ss_pred HHhhhCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 456 (516)
T 1uzb_A 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 999655599999976 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
++++++++++|+|+||+++++... | +..+.||+|+
T Consensus 457 a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 495 (516)
T 1uzb_A 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC
T ss_pred HHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC
Confidence 999999999999999987655332 2 5568999994
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-87 Score=680.43 Aligned_cols=421 Identities=23% Similarity=0.341 Sum_probs=390.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccccccc--CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITT--FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+.++++++.++++.+.......... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 115 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 115 DIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999999887653221110000 02356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..|++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++||
T Consensus 195 a~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 272 (505)
T 3prl_A 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA 272 (505)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCC
Confidence 99999999998 999999999994 67889999997 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.++++++.
T Consensus 273 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~ 351 (505)
T 3prl_A 273 DLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL 351 (505)
T ss_dssp CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999997789999999999999999999995
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 352 ~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 429 (505)
T 3prl_A 352 ENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429 (505)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHH
T ss_pred HCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 67899999974 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..|.||+||++
T Consensus 430 ~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~ 465 (505)
T 3prl_A 430 GKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQG 465 (505)
T ss_dssp HHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBS
T ss_pred HHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCc
Confidence 999999999999977532 223 667999999984
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-87 Score=680.77 Aligned_cols=420 Identities=19% Similarity=0.238 Sum_probs=388.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...... ... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHLQKSEF-TEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHHTCEEE-EEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999987665433221 111 112345788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999999 99999999999888889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
.|++.+++++| .|+||.|+++++||||++ ++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999 9999999999999999999995 5889999999999999999999995
Q ss_pred hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 688999999642 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~ 428 (434)
++++++++++|+|+||+++.+. ..| +..|.||+|+
T Consensus 446 a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~ 483 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGD 483 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESS
T ss_pred HHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCC
Confidence 9999999999999999875432 123 6678999993
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-87 Score=674.66 Aligned_cols=422 Identities=23% Similarity=0.342 Sum_probs=391.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++.. +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 110 ~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999988777655431 111 12345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999999 999999999995 46788999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC--CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~--~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 4889999999999999999999985
Q ss_pred -hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 319 -VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 319 -~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 57899999976 3368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 397 FVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++|+|+||+++.+. ..| +..|.||+||+.
T Consensus 426 ~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 461 (479)
T 2imp_A 426 AIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGAD 461 (479)
T ss_dssp HHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBS
T ss_pred HHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCc
Confidence 9999999999999977652 222 556888998874
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-87 Score=678.20 Aligned_cols=421 Identities=22% Similarity=0.299 Sum_probs=390.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMEDR-TFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCEE-ECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 99999998887765432 1111 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999999 999999999994 57889999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR 365 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999965 789999999999999999999985
Q ss_pred hCCeeeecCccCC---------CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecC
Q 013901 319 VSGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (434)
Q Consensus 319 ~~~~v~~gg~~~~---------~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~ 389 (434)
+|+++++||.... .|+|++|||+.+ +++|++++||+||||++|++|+|++|||+++|++++||+++|||+
T Consensus 366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 444 (515)
T 2d4e_A 366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444 (515)
T ss_dssp TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence 6789999997643 589999999999 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 390 NKKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 390 d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
|.++++++++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 487 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREG 487 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBS
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccc
Confidence 99999999999999999999865421 223 667999999873
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-86 Score=673.52 Aligned_cols=422 Identities=22% Similarity=0.344 Sum_probs=390.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++....+...... +. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 113 ~~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGDTI-PG--HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEEEE-CC--SSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cc--cCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999998887765433211 11 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999998 99999999999 567889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 348 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 428 (481)
T 3jz4_A 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 428 (481)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 67899999976 44689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 429 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T 3jz4_A 429 GEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 463 (481)
T ss_dssp HHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred HHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCc
Confidence 999999999999866432 222 667899999873
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-87 Score=673.50 Aligned_cols=414 Identities=28% Similarity=0.401 Sum_probs=387.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.+... +. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~~-~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEVI-PS----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEEE-CC----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcee-cC----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 999999999988755331 11 2456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 164 LLAKLVGEY-----MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 164 ~l~~~~~~a-----lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999998 999999999994 45689999997 999999999999999999887 899999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++++
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 331 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE 331 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999995 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
++. +|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||+++|++++||++||||+|.+++
T Consensus 332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a 407 (486)
T 3pqa_A 332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407 (486)
T ss_dssp HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 985 67899999975 6899999999 9999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+++++. ..| +..|.||+||+.
T Consensus 408 ~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~ 446 (486)
T 3pqa_A 408 LKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREG 446 (486)
T ss_dssp HHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCC
Confidence 999999999999999987643 223 667899999874
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-87 Score=679.74 Aligned_cols=418 Identities=25% Similarity=0.307 Sum_probs=387.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHh---hccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 84 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
+.++++++..+. +......+. ..+. .+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 191 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence 999999988876 222222111 1233 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
++..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++||
T Consensus 192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA 271 (517)
T 3r31_A 192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA 271 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence 999999999999 99999999999778899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999999
Q ss_pred h-hCCeeeecCc-cC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 K-VSGKIVHGGE-RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~-~~~~v~~gg~-~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
. +|+++++||. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 5 6889999993 11 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++++++++++|+|+||+++... ..| +..+.||+||+
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~ 469 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE 469 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCB
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcC
Confidence 99999999999999999965332 122 55788999987
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-86 Score=669.89 Aligned_cols=421 Identities=21% Similarity=0.325 Sum_probs=393.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.++... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 9999999998887655411 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999998 99999999999888889999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 329 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE 329 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999985 6
Q ss_pred CCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++++++
T Consensus 330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~ 409 (462)
T 3etf_A 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA 409 (462)
T ss_dssp TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 7899999974 457999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||++.... ..| +..+.||+||+.
T Consensus 410 ~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~ 443 (462)
T 3etf_A 410 ARLECGGVFINGYSASDARVAFGGVKKSGFGREL 443 (462)
T ss_dssp HHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBS
T ss_pred HhCCcceEEECCCCCCCCCCCcCCcCCCCCCccc
Confidence 99999999999865432 222 567899999884
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-87 Score=674.00 Aligned_cols=421 Identities=23% Similarity=0.348 Sum_probs=390.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYGDI-IHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCCEE-ECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999998887743322 1111 12456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEe---C-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~---~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.|++++.++ +|+|++|+++ | +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999999 9999999999 7 556788999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhc-ccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++++ +++|+|. +++++||++++.+++++.++++
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 349 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999 9999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCc-ccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~-~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++
T Consensus 350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 985 5779999998755688 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||+++.+. ..| +..+.||+||+
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~ 467 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCC
Confidence 9999999999999999977653 222 45788888887
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-86 Score=670.96 Aligned_cols=422 Identities=17% Similarity=0.187 Sum_probs=387.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999995 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++.+.+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 125 ~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGPI-LPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCBE-ECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 99999998877654322 1110 11233577899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh----h-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~----a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.+++++.+ + +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99988765 4 99999999999777889999986 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 48899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 85 57899999976 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--hhcceeeEEECCCchh--hhhh-hhhhhcCCCCcc
Q 013901 395 QQFV--ETVSAGGLVINDTAVH--VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~--~~~~~g~v~iN~~~~~--~~~~-~~~~~~~~~~~~ 430 (434)
++++ +++++|+|+||+++.+ ...| +..+.||+||+.
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~ 481 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRES 481 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEE
T ss_pred HHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcc
Confidence 9999 7799999999986543 1223 677999999884
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-86 Score=667.32 Aligned_cols=418 Identities=23% Similarity=0.366 Sum_probs=377.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999557999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999988765532 1245788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 557889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++++++.
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 342 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999984
Q ss_pred hCCeeeecCcc-C---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 VSGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 ~~~~v~~gg~~-~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++||.. . ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a 422 (478)
T 3ty7_A 343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL 422 (478)
T ss_dssp HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 68899999943 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+.......| +..+.||+||+.
T Consensus 423 ~~~~~~l~~G~v~vN~~~~~~~~PfGG~k~SG~G~~~ 459 (478)
T 3ty7_A 423 HKVARSIEAGTVEINEAGRKPDLPFGGYKQSGLGREW 459 (478)
T ss_dssp HHHHHHSCSSEEEETTCC-------------------
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcCCccc
Confidence 999999999999999944333333 667899999873
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-85 Score=664.86 Aligned_cols=419 Identities=23% Similarity=0.333 Sum_probs=388.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..+. .|+..++
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999986443 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..+++++....++.+....... ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999999888887665433222 12334567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
.+.+++.++ +|+|++++++|+.+.+..|+.| +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999998 9999999999988889999876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-hC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VS 320 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~ 320 (434)
|++.+++++| +|+||.|++++|||||++++++|+++|+++..++++|+|. +++++||++++.+.+++.++++++. +|
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 328 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence 9999999999 9999999999999999999999999999999999999996 5889999999999999999999985 67
Q ss_pred CeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 321 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 321 ~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 408 (474)
T 4h7n_A 329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA 408 (474)
T ss_dssp CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 7899998764 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhhhh----hhhhhcCCCC
Q 013901 399 ETVSAGGLVINDTAVHVIML----ALLKNHTLLR 428 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~ 428 (434)
+++++|+|+||+.+++...+ +..+.||+|+
T Consensus 409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~ 442 (474)
T 4h7n_A 409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG 442 (474)
T ss_dssp TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC
T ss_pred HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC
Confidence 99999999999988776543 4568888873
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-86 Score=666.04 Aligned_cols=418 Identities=22% Similarity=0.322 Sum_probs=387.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCC----Ccc-eEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCC
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~ 158 (434)
+.+++++++++.+.+... +.. ..+ ... +++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 999999998887654421 111 122 345 899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 159 ~~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
|.++..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999999 999999999996 45788999997 999999999999999999887 89999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.++++
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999966889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
++. +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~ 417 (475)
T 1euh_A 340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417 (475)
T ss_dssp HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence 985 57799999976 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECC-Cchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVIND-TAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~-~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+ +..+. ..| +..|.||+||+.
T Consensus 418 ~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~ 456 (475)
T 1euh_A 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG 456 (475)
T ss_dssp HHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBS
T ss_pred HHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCc
Confidence 9999999999999998 65442 222 556888998873
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-86 Score=668.33 Aligned_cols=420 Identities=19% Similarity=0.290 Sum_probs=386.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999997 799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccC--CCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
++.+++++++++.+.+.. .+...... +...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGGDY-IPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCCEE-EESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcCcc-ccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 999999988887764322 11110011 225689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
++..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999999 99999999999667788999996 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 355 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA 355 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999998
Q ss_pred h-hCCeeeecCccCCCC-cccccEEEEeCC---CCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 K-VSGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~~~-~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
. +|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+
T Consensus 356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 433 (501)
T 1uxt_A 356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433 (501)
T ss_dssp HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence 5 57799999976 67 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCc-hh-hhhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTA-VH-VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~-~~-~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||+++ .. ...| +..+.||+||+.
T Consensus 434 ~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 434 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp HHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred HHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 99999999999999999873 21 1222 557889999873
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-85 Score=665.17 Aligned_cols=421 Identities=20% Similarity=0.282 Sum_probs=374.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~- 162 (434)
+.++++++..+.+.+.. .+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELGGVK-EVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCSCEE-CCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhCCee-cccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999998887543321 1111 11235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..|.+++.++ +|+|++|+++|+. +.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999999 9999999999965 5889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999985
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~ 424 (485)
T 4dng_A 347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424 (485)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67899999976 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 425 ~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~ 460 (485)
T 4dng_A 425 ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFG 460 (485)
T ss_dssp HTTSCSSEEEESCC----------------------
T ss_pred HHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccc
Confidence 999999999999987652 222 567899999873
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-85 Score=667.07 Aligned_cols=420 Identities=23% Similarity=0.336 Sum_probs=378.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~- 162 (434)
+.+++++...+...+ ..+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999988877665333 11111 01235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc--ccCceEEecCCCCceEEcCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~--~~~p~~~e~gG~~~~iv~~d 237 (434)
..+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999999 999999999995 78899999997 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 351 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL 351 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 58899999999999999999999
Q ss_pred hh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 317 DK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 317 a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+. +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++
T Consensus 352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 95 67899999976 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~ 467 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFN 467 (508)
T ss_dssp HHHTTSCSSEEEECC--------------------CCC
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCc
Confidence 99999999999999987652 222 567899999873
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-84 Score=657.46 Aligned_cols=418 Identities=20% Similarity=0.276 Sum_probs=385.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998888765543211 12345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCce-EEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~-~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.++++++|+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999999 99999999999888899999997 999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCc-HHHHHHHHHHHHhcccCCC-CC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-PL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
+.|++.+++++| +|+||.|++++++|||+++ +++|+++|+++++++++|+ |. +++++||++++++++++.++++++
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a 342 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL 342 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999996 9999999999999999999 75 588999999999999999999998
Q ss_pred h-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. +|+++++||.. +.+|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 421 (490)
T 3ju8_A 343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421 (490)
T ss_dssp HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence 5 67899999865 3479999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh--hh-hhhhhcCCCC
Q 013901 396 QFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLR 428 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~ 428 (434)
++++++++|+|+||+++.+.. .| +..+.||+++
T Consensus 422 ~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~~ 457 (490)
T 3ju8_A 422 QFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457 (490)
T ss_dssp HHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSSC
T ss_pred HHHHhcCcceEEECCCcCCCCCCCCcCCccccchhH
Confidence 999999999999999765321 12 3456666554
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-85 Score=661.92 Aligned_cols=420 Identities=20% Similarity=0.270 Sum_probs=385.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+. ..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPSLMMGD-SLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHHHHCEE-EEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999987655443322 11111 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999999 99999999999778889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCE-EEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 242 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
.|++.+++++| .|+||.|+++++ ||||++ +++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999 999999 999999999999999999995 5889999999999999999999984
Q ss_pred hCCeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 319 VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 319 ~~~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 688999999742 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchh--hhhh-hhhhhcCCC--Cc
Q 013901 397 FVETVSAGGLVINDTAVH--VIML-ALLKNHTLL--RS 429 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~--~~~~-~~~~~~~~~--~~ 429 (434)
+++++++|+|+||++... ...| +..+.||+| |+
T Consensus 424 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~ 461 (486)
T 1t90_A 424 FRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHA 461 (486)
T ss_dssp HHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCS
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCcc
Confidence 999999999999985432 1122 557888888 66
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-84 Score=661.19 Aligned_cols=421 Identities=18% Similarity=0.221 Sum_probs=384.8
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
++.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++ +++|+.++++|+|||..+++..++..++
T Consensus 88 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~ 167 (563)
T 4e3x_A 88 AHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI 167 (563)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999998 9999999999999999999754499999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.+....... .....+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 168 ~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~ 243 (563)
T 4e3x_A 168 DFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASY 243 (563)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHH
Confidence 9999999999888764432211 122345667778999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCc------eEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p------~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|+||+++|+ .+.++.|++|+ +|.|.||||+.+|+.|.+.+++++|| +++|+|||||+||
T Consensus 244 ~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV 323 (563)
T 4e3x_A 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFV 323 (563)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceee
Confidence 999999999 999999999995 45789999997 99999999999999999999998885 9999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CC-CCcccccCCHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLSK 312 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~ 312 (434)
++|||++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+| .+ ++++||++++.+++++.+
T Consensus 324 ~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~ 402 (563)
T 4e3x_A 324 HSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKK 402 (563)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999999 64 789999999999999999
Q ss_pred HHHHhh--hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHH-hcCCCCcEEEE
Q 013901 313 LLDDDK--VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAYL 386 (434)
Q Consensus 313 ~i~~a~--~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~i 386 (434)
+|++++ .|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||+++|
T Consensus 403 ~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V 482 (563)
T 4e3x_A 403 WLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAV 482 (563)
T ss_dssp HHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEE
T ss_pred HHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEE
Confidence 999996 477999999764 4689999999999999999999999999999999997 79999999 78999999999
Q ss_pred ecCCHHHHHHHHhhcc--eeeEEECCCchhhhh---h-hhhhhcCCC-Ccc
Q 013901 387 FTNNKKLKQQFVETVS--AGGLVINDTAVHVIM---L-ALLKNHTLL-RSC 430 (434)
Q Consensus 387 ~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~---~-~~~~~~~~~-~~~ 430 (434)
||+|.+++++++++++ +|+|+||+.+++... | +..+.||+| |++
T Consensus 483 ~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~ 533 (563)
T 4e3x_A 483 FAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533 (563)
T ss_dssp ECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTT
T ss_pred EeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccC
Confidence 9999999999999976 999999997655432 2 567888988 553
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-82 Score=680.50 Aligned_cols=419 Identities=17% Similarity=0.241 Sum_probs=390.9
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++.++..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+|||..++. .|+..+++
T Consensus 556 ~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid 634 (1026)
T 4f9i_A 556 SEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAID 634 (1026)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+++.+.++..... ..+..+++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 635 ~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 635 FLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 99999999988765443221 134567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv~ 235 (434)
+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||+
T Consensus 712 l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~ 791 (1026)
T 4f9i_A 712 LVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID 791 (1026)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEEC
Confidence 99999999 999999999995 56789999997 999999999999999999988 4689999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++|+| .|+||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 792 ~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i 870 (1026)
T 4f9i_A 792 DDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYA 870 (1026)
T ss_dssp TTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 588999999999999999999
Q ss_pred HHhhhCCeeeecCccCCC-CcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~~-~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++++..+++++||..+.. |+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 871 ~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~ 950 (1026)
T 4f9i_A 871 EIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEH 950 (1026)
T ss_dssp HHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHH
T ss_pred HHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHH
Confidence 999755599999987555 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhhh----hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIML----ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~ 428 (434)
++++++++++|+|+||+.+++...+ +..+.||+|+
T Consensus 951 a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~ 989 (1026)
T 4f9i_A 951 LAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT 989 (1026)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC
T ss_pred HHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC
Confidence 9999999999999999987664322 5578888884
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-81 Score=641.41 Aligned_cols=421 Identities=16% Similarity=0.199 Sum_probs=374.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A-~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+ .|+++++++|++| |+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 677889999987 8999999999999 5999999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcccccc--cc--ccccCCC-cceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCC
Q 013901 83 KTSIKSALKELKHWMTPEKA--KT--SITTFPS-SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~ 156 (434)
++.+++++...+.+...... +. +....+. ..+++++|+ |||++|+|||||+...++++++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999887665321110 00 1000111 357889997 999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhh--cCCCcEEEEeCChHhHHHHhcC--CCCeEEEeCChHHHHHHHHHHh--cccCceEEecCCCC
Q 013901 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 230 (434)
Q Consensus 157 ~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~~~~~~L~~~--~v~~v~ftGs~~~~~~v~~~~~--~~~~p~~~e~gG~~ 230 (434)
.+|+++..+++++.++ +|+|++|+++|+.. .+.++ .+|.|.||||+.+|+.|.+.++ +++||+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999997 69999999998532 24433 4899999999999999998875 78999999999999
Q ss_pred ceEEcCCC-----CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCH
Q 013901 231 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNS 304 (434)
Q Consensus 231 ~~iv~~da-----d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~ 304 (434)
|+||++|| |++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 99999999 99999999999999 9999999999999999999999999999999999999996 48899999999
Q ss_pred HHHHHHHHHHHHhhhCCeeeecCccC-------CCCcccccEEEEeCCCC--CCccccccccceeeEeecC---CH----
Q 013901 305 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI---- 368 (434)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~---~~---- 368 (434)
.+++++.++|+++.+|+++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~ 424 (534)
T 2y53_A 345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424 (534)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence 99999999999987788999999742 35899999999999987 6899999999999999999 99
Q ss_pred -HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEECCCchh----------hhhh-hhhhhcCCCCcc
Q 013901 369 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH----------VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 369 -~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~--~~g~v~iN~~~~~----------~~~~-~~~~~~~~~~~~ 430 (434)
+|||+++|+++|||++||||+|.++++++++++ ++|+|+||+++.+ ...| +..|.||+||+.
T Consensus 425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~ 500 (534)
T 2y53_A 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEEL 500 (534)
T ss_dssp THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEE
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCc
Confidence 999999999999999999999999999999999 8999999986532 1222 667899999983
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-79 Score=658.82 Aligned_cols=411 Identities=19% Similarity=0.274 Sum_probs=379.7
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+|||..++. .|+..+++.+++++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999996 79999999999999
Q ss_pred HHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~ 170 (434)
...+.+.+...... ...+..++++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.
T Consensus 623 ~~a~~~~g~~~~~~--~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAMP--GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEECC--CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCcccccc--CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 99888755321111 1134577899999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCCCHHHHHH
Q 013901 171 EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACR 245 (434)
Q Consensus 171 ~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~dad~~~aa~ 245 (434)
++ +|+|+||+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 98 99999999999655589999997 99999999999999999998864 799999999999999999999999999
Q ss_pred HHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhhhCCeee
Q 013901 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIV 324 (434)
Q Consensus 246 ~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~ 324 (434)
.+++|+| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.++|+++...+++
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v- 858 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL- 858 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence 9999999 9999999999999999999999999999999999999996 588999999999999999999999766688
Q ss_pred ecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc
Q 013901 325 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402 (434)
Q Consensus 325 ~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~ 402 (434)
+||..+..|+|+.|||+.. +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+++++++++++
T Consensus 859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~ 936 (1001)
T 3haz_A 859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQ 936 (1001)
T ss_dssp EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCC
Confidence 9988766799999999974 6788999999999999999986 79999999999999999999999999999999999
Q ss_pred eeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 403 AGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 403 ~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
+|+|+||+.+++... | +..+.||+|+
T Consensus 937 aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~ 966 (1001)
T 3haz_A 937 VGNIYVNRNMIGAVVGVQPFGGNGLSGTGP 966 (1001)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCCGGGBCCC
T ss_pred eeeEEEeCCCcCCCCCCCCCCCcccCcCCC
Confidence 999999998766532 2 5678899994
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-79 Score=626.59 Aligned_cols=416 Identities=16% Similarity=0.199 Sum_probs=372.7
Q ss_pred ccchhh-cccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.++ +++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 577888 999999999999999999999999999999999999999999999999999999999999999987 699999
Q ss_pred HHHHHHHHHHHHh--hcccccc---ccccccCCCcceEeeecceEEEEEcCCchhHHhhH--hHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKH--WMTPEKA---KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~vVlkps 155 (434)
++.++++++.++. +..+... +......+...+++++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999999887 4332211 00001122456889999999999999999999865 899999999999999999
Q ss_pred CCChHHHHHHHHHHH----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc--CceEEec
Q 013901 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~--~p~~~e~ 226 (434)
+.+|.++..+++++. ++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++ ||+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 999999999998765 45 99999999999 568889999997 999999999999999999999998 9999999
Q ss_pred CCCCceEEcCCC---CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccC
Q 013901 227 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV 302 (434)
Q Consensus 227 gG~~~~iv~~da---d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~ 302 (434)
|||||+||++|| |++.|++.+++++| .|+||.|+++++||||++ ++++|+++|++++++++.+ +.+||++
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~ 361 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGI 361 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHH
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHH
Confidence 999999999999 88999999999999 999999999999999998 9999999999999998754 6799999
Q ss_pred CHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCC---CCccccccccceeeEeecCCHHHHHHHHhcCC
Q 013901 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (434)
Q Consensus 303 ~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 379 (434)
+++..+++.++++ ..|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|+++
T Consensus 362 ~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~ 437 (528)
T 3v4c_A 362 AKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437 (528)
T ss_dssp HHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence 8887777777764 467899999976 7999999999988887 89999999999999999999999999999999
Q ss_pred CCcEEEEecC--CHHHHHHHHhhcc--eeeEEECCCchhh----hhh-hh-hhhcCCCCcc
Q 013901 380 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHV----IML-AL-LKNHTLLRSC 430 (434)
Q Consensus 380 ~gl~~~i~t~--d~~~~~~~~~~~~--~g~v~iN~~~~~~----~~~-~~-~~~~~~~~~~ 430 (434)
|||+++|||+ |.+++++|+++++ +|+|+||+++++. ..| +. .+.||+||+.
T Consensus 438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~ 498 (528)
T 3v4c_A 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGAT 498 (528)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCC
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCC
Confidence 9999999999 8899999999998 9999999976532 222 44 7888888863
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-79 Score=620.95 Aligned_cols=412 Identities=16% Similarity=0.205 Sum_probs=368.0
Q ss_pred ccchh-hcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~-~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+ ++++.++..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 67788 7999999999999999999999999999999999999999999999999999999999999998885 699999
Q ss_pred HHHHHHHHHHHHh--hccccccc-cccc-cCC-CcceEeeecceEEEEEcCCchhHHhhH--hHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKH--WMTPEKAK-TSIT-TFP-SSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~vVlkps 155 (434)
++.++++++.+++ +.++.... .+.. ..+ ...+++++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998886 54432110 0000 011 235789999999999999999999854 999999999999999999
Q ss_pred CCChHHHHHHHHHHH----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc--CceEEec
Q 013901 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~--~p~~~e~ 226 (434)
+.+|.++..+++++. ++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++ ||+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 999999999999985 45 89999999999 667889999997 999999999999999999999886 9999999
Q ss_pred CCCCceEEcCCCCHH--HHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccCC
Q 013901 227 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN 303 (434)
Q Consensus 227 gG~~~~iv~~dad~~--~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~ 303 (434)
|||||+||++|||++ .|++.+++++| .|+||.|+++++||||++ ++++|+++|++++++++. ||+++
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~ 324 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT 324 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence 999999999999999 99999999999 999999999999999999 999999999999999864 58888
Q ss_pred HHHHHHHHHHHHHhh--hCCeeeecCccCCCCcccccEEEEeCCCC---CCccccccccceeeEeecCCHHHHHHHHhcC
Q 013901 304 SNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378 (434)
Q Consensus 304 ~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 378 (434)
+.+.+++.++++++. .|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|++
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~ 401 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence 889999999999886 4679999987 3899999999988777 9999999999999999999999999999999
Q ss_pred CCCcEEEEecCCH--HHHHHHHhhc--ceeeEEECCCchh----hhhh-hh-hhhcCCCCc
Q 013901 379 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVH----VIML-AL-LKNHTLLRS 429 (434)
Q Consensus 379 ~~gl~~~i~t~d~--~~~~~~~~~~--~~g~v~iN~~~~~----~~~~-~~-~~~~~~~~~ 429 (434)
++||++||||+|. ++++++++++ ++|+|+||+++++ ...| +. .+.+|+|+.
T Consensus 402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~ 462 (510)
T 1ez0_A 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAS 462 (510)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSC
T ss_pred CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCC
Confidence 9999999999987 7899999999 7999999987642 1222 33 466777754
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-73 Score=573.88 Aligned_cols=378 Identities=18% Similarity=0.166 Sum_probs=307.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHHHHHH-HHHHHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSALKE 92 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ei~~-~~~~~~~~~~~ 92 (434)
.+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8876579998 89999999999
Q ss_pred HHhhcccccccccc-c----cCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHH
Q 013901 93 LKHWMTPEKAKTSI-T----TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (434)
Q Consensus 93 ~~~~~~~~~~~~~~-~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~ 167 (434)
++.+.......+.. . ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 98876432210010 0 01335688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----h----h-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 168 LVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 168 ~~~----~----a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
++. + + +|+|++|+++ +. +.+..|..|+ +|.|.||||+.+|+.+.+.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 5788899997 99999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccC---CCCCCCCcccccCCHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~ 313 (434)
|||++.|++.+++++| +|+| .|+++++||||+++ ++|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999987 76522 344
Q ss_pred -HHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 314 -LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 314 -i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55554 4677875 4 789887 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-h-----hhhhcCCCCccc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-A-----LLKNHTLLRSCI 431 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~-----~~~~~~~~~~~~ 431 (434)
+++++++++++|+|+||+++.+. ..| + ..++||+||++.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~G~ 424 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGP 424 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGGGCC----------------------
T ss_pred HHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCCcc
Confidence 99999999999999999876542 223 4 688899998743
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-72 Score=567.14 Aligned_cols=381 Identities=14% Similarity=0.188 Sum_probs=332.4
Q ss_pred hhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHH
Q 013901 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (434)
Q Consensus 8 ~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~ 87 (434)
+..++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..+...+.+.
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~-- 80 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKH-- 80 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH--
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH--
Confidence 456677889999999999999999999999999999999999999999999999999999999988865444333333
Q ss_pred HHHHHHHhhccccccccc-cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHH
Q 013901 88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (434)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~ 166 (434)
+..++......+. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus 81 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 81 -----VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp -----HHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred -----HHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 3333332211111 1123567788999999999999999999999999999999999999999999999998866
Q ss_pred HH----HHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecC-CCCceEEcCCC
Q 013901 167 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI 238 (434)
Q Consensus 167 ~~----~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~g-G~~~~iv~~da 238 (434)
++ +.++ +|+|+||++++ +.+.+..|++|+ +|.|.||||+.. .+.+++++||+ +|+| ||+|+||++||
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dA 230 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSA 230 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence 54 5677 99999999999 578899999997 999999999984 56677788999 6777 99999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHH-------hcccCCCCC--CCCcccccCCHHHHHH
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL--ESKDLSRIVNSNHFAR 309 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~--~~~~~gpl~~~~~~~~ 309 (434)
|++.|++.+++|+| +|+||.|+++++||||+++|++|+++|+++. .++++|+|. +++++||+++.+++++
T Consensus 231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 99999999999999 9999999999999999999999999999986 345677774 4789999999999999
Q ss_pred HHHHHHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHH----HHHhcCCCCcEE
Q 013901 310 LSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA 384 (434)
Q Consensus 310 ~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~ 384 (434)
+.++++.+. .|+++++||.. ++++++++ .+|+||||++|++|+|++||| +++|++++||++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEET-------------KVGAKIPY-SREKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGG-GSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCcc-cccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 999998774 67899999853 45777875 489999999999999999997 799999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEECCCchhh
Q 013901 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415 (434)
Q Consensus 385 ~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~ 415 (434)
+|||+|.+++++|++++++|+|+||+++.|.
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 406 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALG 406 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEEESSCHHHH
T ss_pred EEEeCCHHHHHHHHHhCCEeEEEEECCcccc
Confidence 9999999999999999999999999998874
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-72 Score=563.78 Aligned_cols=380 Identities=18% Similarity=0.193 Sum_probs=323.0
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++.+++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~--- 77 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY--- 77 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence 35678999999999999999999999999999999999999999999999999999999999987546555444442
Q ss_pred HHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~ 169 (434)
.++......+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 222222111111 112345788999999999999999999999999999999999999999999999999988887
Q ss_pred H----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 170 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 170 ~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
. ++ +|+|++|++++ +.+.++.|++|+ +|.|.||||+..+ +.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 56 99999999999 678899999997 9999999999854 456678899999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hCC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSG 321 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~ 321 (434)
|++.+++|+| +|+||.|+++++||||+++||+|+++|+++ +||++++++.+++.++++++. .++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999 999999999999999999999999999875 489999999999999998653 345
Q ss_pred eeeecCccC----CCCcccccEE-------EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCC----CCcEEEE
Q 013901 322 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL 386 (434)
Q Consensus 322 ~v~~gg~~~----~~~~~~~Ptv-------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~i 386 (434)
++ +||... ..|+|++||+ +.++++++++.+ |+||||++|++|+|++|||+++|++. +||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 55 577542 3589999997 567888998765 89999999999999999999999974 9999999
Q ss_pred ecCCHHHHHH---HHhhcceeeEEECCCchhhhhh
Q 013901 387 FTNNKKLKQQ---FVETVSAGGLVINDTAVHVIML 418 (434)
Q Consensus 387 ~t~d~~~~~~---~~~~~~~g~v~iN~~~~~~~~~ 418 (434)
||+|.+.+++ |++++++|+|+||+++.+....
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G 407 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPTTHGGIG 407 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccc
Confidence 9999877777 9999999999999988776443
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-71 Score=554.44 Aligned_cols=376 Identities=20% Similarity=0.160 Sum_probs=302.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhc-------CCCch----
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL---- 72 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~---- 72 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+ |||..
T Consensus 16 tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~ 95 (463)
T 2h5g_A 16 ENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLS 95 (463)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhh
Confidence 6888999999999999999999999999999999999999999999999999999999999999 69987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEE
Q 013901 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152 (434)
Q Consensus 73 ~a~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVl 152 (434)
++. .|+..+++.++++++.++++.++.. +......+...+++++|+|||++|+||| |.... +++++||++||+||+
T Consensus 96 ~a~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVl 171 (463)
T 2h5g_A 96 LST-SKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLL 171 (463)
T ss_dssp CCH-HHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEE
T ss_pred hhH-HHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEE
Confidence 454 7999999999999988877765431 1110012335688999999999999776 66655 799999999999999
Q ss_pred eCCCCChHHHHHHHHHHHhhc----CCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecC
Q 013901 153 KPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227 (434)
Q Consensus 153 kps~~~~~~~~~l~~~~~~al----p~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~g 227 (434)
|||+.+|.++..|++++.+++ |+|+||+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ +||+++|+|
T Consensus 172 Kps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 172 KGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred ECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999986 5999999998656788999997 999999999999999999887 899999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHH
Q 013901 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (434)
Q Consensus 228 G~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~ 307 (434)
||||+||++|||++.|++.+++++| .| ||.|+++++||||+++++ ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----H
Confidence 9999999999999999999999999 98 999999999999999998 232 2
Q ss_pred HHHHHHHHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEE
Q 013901 308 ARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386 (434)
Q Consensus 308 ~~~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 386 (434)
+ ++++++. +|++++.|+.....++|+ +++|++++||+||||++|++|+|++|||+++|++++||+++|
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v 367 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVI 367 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEE
T ss_pred H---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEE
Confidence 2 3455554 577877444322234432 578999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCC
Q 013901 387 FTNNKKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLL 427 (434)
Q Consensus 387 ~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~ 427 (434)
||+|.++++++++++++|+|+||+++.+. ..| +..+.||+|
T Consensus 368 ~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G 410 (463)
T 2h5g_A 368 VTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGIS 410 (463)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCC
Confidence 99999999999999999999999876432 222 556888888
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-68 Score=535.62 Aligned_cols=353 Identities=18% Similarity=0.199 Sum_probs=290.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHH-------HHHHHHH
Q 013901 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIY-------EVALLKT 84 (434)
Q Consensus 16 ~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ei~~~~~ 84 (434)
.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .+++.. |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999985 355433 5666777
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+.+.. +. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-GE-MSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-TC-EEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-Cc-cCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 776665443211 11 111110112456789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHH----Hhh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 165 l~~~~----~~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
+++++ .++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+++.+.+.+ +||+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 544 566677786 99999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccC---CCCCCCCcccccCCHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~ 313 (434)
|||++.|++.+++++| .|+| .|+++++||||++++++|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHH
Confidence 9999999999999999 9999 9999999999999999999999999999887 6542 2456
Q ss_pred HHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 314 i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++++.. | ++ +++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665421 1 11 24678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchh
Q 013901 394 KQQFVETVSAGGLVINDTAVH 414 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~ 414 (434)
++++++++++|+|+||+++.+
T Consensus 379 a~~~a~~l~aG~V~vN~~~~~ 399 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTRF 399 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGGG
T ss_pred HHHHHHhCCcceEEEcCCCcc
Confidence 999999999999999997654
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-68 Score=529.31 Aligned_cols=365 Identities=17% Similarity=0.219 Sum_probs=307.1
Q ss_pred CHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHH
Q 013901 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLK 83 (434)
Q Consensus 15 ~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ei~~~~ 83 (434)
..+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .++.. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999986 55532 4788888
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++.+. .+. ..+......+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~l~~~a~~~~~-~g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGE-VIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTC-EEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCc-cccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 888877654432 111 111000011344688999999999999885 4788999999999999999999999999999
Q ss_pred HHHHHHH----hh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 164 LLAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 164 ~l~~~~~----~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
.+++++. ++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+|+.+.+.+ +||+++|+|||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999998 45 89999999998 444 566677786 99999999999999999887 49999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+|||++.|++.+++++| .|+| .|+++++||||++++|+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999987542
Q ss_pred HhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 316 ~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
++||... .+ |+ |||. +.++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH-HH-HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh-hh-hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233211 12 33 8862 457889999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh-hh-hhhhhcCCC
Q 013901 396 QFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLL 427 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~ 427 (434)
++++++++|+|+||++..+.. .| +..+.||+|
T Consensus 364 ~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g 397 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGIS 397 (427)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEE
T ss_pred HHHHhCCccEEEECCCCccCCCCCCCCccccccc
Confidence 999999999999998765321 12 445677775
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.54 Score=45.10 Aligned_cols=321 Identities=16% Similarity=0.142 Sum_probs=168.6
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCC-C------chhhhHHHHHHH--------HHHHHHHHHHHHhh
Q 013901 32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK-P------ELESSIYEVALL--------KTSIKSALKELKHW 96 (434)
Q Consensus 32 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~~ei~~~--------~~~~~~~~~~~~~~ 96 (434)
.|+..+.++-.+.++.+-+.++++.|+-+...++..-+ . +.-. ..|+..+ .+.++.+.++.+.|
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 45555666666777777777777766655444443221 1 1111 1244333 23345555666666
Q ss_pred ccccccccc-c-ccCCCcceEeeecceEEEEEcCCc---hhHHhhHhHHHHHHhhCCEE-E-EeCCCCChHHHHHHHHHH
Q 013901 97 MTPEKAKTS-I-TTFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNAL-V-LKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 97 ~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~v-V-lkps~~~~~~~~~l~~~~ 169 (434)
...+..... . ...+.....++.|+--|+++.|.- || ++.+..++||-.+|+.= | ..|++....-...|+.+-
T Consensus 105 h~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~ 183 (423)
T 4gic_A 105 AERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAY 183 (423)
T ss_dssp HHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHH
T ss_pred HHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHH
Confidence 544432221 1 123445567888999999999963 55 44555789999999973 3 334432211122222111
Q ss_pred HhhcCCCcEEEEe-CChHhHHHHhc---C-C-CCeEEEeCChHHHHHHHHHHhcccCceEEec-CCCCceEE--cCCCCH
Q 013901 170 GEYMDLSSIRVVE-GAVAETSALLD---Q-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINL 240 (434)
Q Consensus 170 ~~alp~g~v~~i~-~~~~~~~~L~~---~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~-gG~~~~iv--~~dad~ 240 (434)
. .|+=.+.. |+.+...+|.= . + ||.|+=.|+.=+...= +... ..+-..+ .|.+=+.| ++++|.
T Consensus 184 l----~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK-r~v~---g~VgIDm~AGPSEilViAD~~a~p 255 (423)
T 4gic_A 184 I----SGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAK-KLVF---GQVGIDMVAGPSEILVISDGRTDP 255 (423)
T ss_dssp H----HTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHB---TTBEECCCCCCCEEEEEECSCSCH
T ss_pred h----cCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHH-HHhc---CCcCcccccccceEEEEeCCCCCH
Confidence 1 12223332 34455555531 2 3 9999988876554221 2221 1122222 34444333 556899
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhC
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 320 (434)
+..+-.++--+= .+. ..+.++|..+ ++|.+++.+++.++.-. +... +...+-++
T Consensus 256 ~~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r~---~i~~~sl~----- 309 (423)
T 4gic_A 256 DWIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MERA---EVIRTSLE----- 309 (423)
T ss_dssp HHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTTH---HHHHHHHH-----
T ss_pred HHHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------CccH---HHHHHHHh-----
Confidence 999988887775 332 2345667666 66666666666553211 1111 11111111
Q ss_pred CeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q 013901 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400 (434)
Q Consensus 321 ~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~ 400 (434)
-+| .++.++|++|+++++|..-.- -.-|.++|.. .+..+
T Consensus 310 ----------------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~ 348 (423)
T 4gic_A 310 ----------------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVES 348 (423)
T ss_dssp ----------------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGG
T ss_pred ----------------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhh
Confidence 011 255679999999999995333 3678888876 56677
Q ss_pred cc-eeeEEECCCchhh------hhhhhhhhcCCCCc
Q 013901 401 VS-AGGLVINDTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 401 ~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~ 429 (434)
++ +|.|++..++.-. ...+.|.++|..|.
T Consensus 349 i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~ 384 (423)
T 4gic_A 349 IRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARF 384 (423)
T ss_dssp CCCCSEEEEC----------------CCCCTTGGGT
T ss_pred CcEeceeecCCCCchhhhhcCcCCCccCCCCCcccc
Confidence 76 8999997644222 23356666666554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=85.93 E-value=25 Score=33.75 Aligned_cols=313 Identities=17% Similarity=0.197 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcccccccc-c
Q 013901 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S 105 (434)
Q Consensus 39 ~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ei~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 105 (434)
.+-.+.++.+-+.++++.|+-+...++...+. +.-. ..|+..+ .+.++.+.++.+.|...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 44555666677777777776555555544321 1111 1344433 3445555666666665553321 1
Q ss_pred c-ccCCCcceEeeecceEEEEEcCC---chhHHhhHhHHHHHHhhCCEEEEe--CCCCChHHHHHHHHHHHhhcCCCcEE
Q 013901 106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALVLK--PSEVAPASSSLLAKLVGEYMDLSSIR 179 (434)
Q Consensus 106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~vVlk--ps~~~~~~~~~l~~~~~~alp~g~v~ 179 (434)
. ...|-....++.|+.-|+++.|. -|| ++.+..++||-.+|+.=|+. |+.-.|.+ |+..- -.|+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA~----l~Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI---LYAAQ----LCGVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHHH----HTTCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHHH----HcCCCE
Confidence 1 11233455678899999999998 355 45566789999999875544 44222222 21111 113222
Q ss_pred EEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEec-CCCCceEE--cCCCCHHHHHHHHHHH
Q 013901 180 VVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLKVACRRMIMG 250 (434)
Q Consensus 180 ~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~-gG~~~~iv--~~dad~~~aa~~i~~~ 250 (434)
+.. |+.+...+|. +. + ||.|+=.|..=+... .+........|-..+ .|.+=+.| +++||.+..+-.++--
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A-Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA-KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH-HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH-HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 332 3445555553 22 3 999998887654311 111100011122222 34444433 5568999999888877
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccC
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~ 330 (434)
+= .+. ..+.++|..+ +++.+++.+++.++.-. +... +. ++
T Consensus 260 AE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr~---~i----a~--------------- 299 (434)
T 1kae_A 260 AE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPRA---ET----AR--------------- 299 (434)
T ss_dssp HT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTTH---HH----HH---------------
T ss_pred hc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CChH---HH----HH---------------
Confidence 65 332 2345666655 56666666555543211 1110 11 11
Q ss_pred CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEEC
Q 013901 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVIN 409 (434)
Q Consensus 331 ~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN 409 (434)
+-+..- .++.++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++.
T Consensus 300 -----------------------~sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 300 -----------------------QALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp -----------------------HHHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred -----------------------HHHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcC
Confidence 111122 466789999999999995443 3678898885 5566666 8999999
Q ss_pred CCchhh------hhhhhhhhcCCCCc
Q 013901 410 DTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 410 ~~~~~~------~~~~~~~~~~~~~~ 429 (434)
.++.-. ...+.|.++|..|.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G~AR~ 377 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYGYTAT 377 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTTGGGT
T ss_pred CCCchhhcccccCCCcccCCCCceec
Confidence 755322 22255566665554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 434 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-74 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-72 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-72 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-69 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 2e-58 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 8e-45 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-44 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 6e-34 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-18 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-13 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-12 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 237 bits (606), Expect = 8e-74
Identities = 94/407 (23%), Positives = 163/407 (40%), Gaps = 10/407 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A + + + R L L ++ + D KP + S
Sbjct: 52 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ ++ + + L+ W KT + EP GV I PWN+P L
Sbjct: 112 YLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
+ + A+A GN +V+K +E P ++ +A L+ E + +V G A +
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 193 -DQKWDKICYTGNSRVARIVM-AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
+ DK+ +TG++ + R++ AA + +L V LELGGKSP + S ++ A +
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 310
+ +C + Y + S+ G + V+ F ++
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347
Query: 311 SKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
++ K G K++ GG ++ I PT+ DV I EEIFGP++ IL I
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
E+ N+ T LAA +FT + + + AG + +N V
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFG 454
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 233 bits (596), Expect = 3e-72
Identities = 92/411 (22%), Positives = 168/411 (40%), Gaps = 12/411 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
D + A ++ + +T R L L ++ + + K +
Sbjct: 52 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ ++ +++ W + +T EP GV I PWN+P L
Sbjct: 112 YLMDLGGCIKTLRYC----AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
+ L + A++ GN +V+KP+E P ++ + L+ E + +V G A +
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227
Query: 193 -DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
DK+ +TG++ V +++ AA K +L V LELGGKSP + + +L A G
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLE-SLKNELENFYGKNPLESKDLSRIVNSNHFAR 309
+ + GQ CI+ + + + + S++ + G ++ + +
Sbjct: 288 VFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346
Query: 310 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
+ L++ K G K+ GG NK I PT+ DV D I EEIFGP+ I+
Sbjct: 347 ILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIML 418
++D N+ L+A +FTN+ + +G + +N +V
Sbjct: 407 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQC 457
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 231 bits (589), Expect = 6e-72
Identities = 180/393 (45%), Positives = 254/393 (64%), Gaps = 5/393 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 6 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 65
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 66 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 125
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 126 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 185
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 186 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 244
Query: 263 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ +++E LK L++FYG++ +S+D RI+N HF R+ L+D+ KV
Sbjct: 245 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKV--- 301
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 302 -AHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 360
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
A Y+F+NN+K+ ++ + S+GG+ ND VH+
Sbjct: 361 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHI 393
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 224 bits (573), Expect = 6e-69
Identities = 95/415 (22%), Positives = 172/415 (41%), Gaps = 20/415 (4%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ + A V+ + + + R + +++ ER +I + K E+
Sbjct: 59 EVDQA---VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA 115
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
A + + + A EP GV I WNYPF+
Sbjct: 116 EYDIDAAWQCIEYY-----AGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 192
++ A+A GNA+V KPS + P + +LA++ E + + + VV+G S L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
K+ +TG+ + VM +AK + V LELGGKSP++ L+ A R +M +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLS 311
GQ C + + ++ P+ LE + + G L + +++ ++
Sbjct: 291 LTQ-GQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349
Query: 312 KLLDDDKVSG-KIVHGGER-------DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 363
+ K G +++ GGE KN ++P +L + D + EEIFGP++ +L
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409
Query: 364 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIML 418
D E+ N+ T LA+ +FT + + + AG IN ++ + +
Sbjct: 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEV 464
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 196 bits (498), Expect = 2e-58
Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 13/407 (3%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+AA V+ FA + R L L ++ E + ++ KP +
Sbjct: 40 QVDAA---VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA 96
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
E+ + + ++ I +P GVV I+PWNYP +
Sbjct: 97 FNDEIPAIVDVFR---FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL-- 192
++ + A+AAGN +VLKPSE+ P ++ LA+L + + ++ G L
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTG 213
Query: 193 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 252
K + TG+ +++ A + +ELGGK+PV+ +++ + +
Sbjct: 214 HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY 273
Query: 253 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFY-GKNPLESKDLSRIVNSNHFARLS 311
N GQ C + I K L+E L + G ES +L + + H R+
Sbjct: 274 -YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332
Query: 312 KLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 368
K +++ K +G K++ GGE+ K N APTLL +D I+ +E+FGP++ + D
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392
Query: 369 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
E + N LA+ ++T + + + G +N + V
Sbjct: 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLV 439
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 160 bits (406), Expect = 8e-45
Identities = 89/412 (21%), Positives = 171/412 (41%), Gaps = 17/412 (4%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+AEAA ++ F + K R L ++ R+ ++ L ++ K +E+
Sbjct: 75 EAEAA---LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA 131
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
S + A L++ A + E P G ++I+PWN+P
Sbjct: 132 SADVAEAIDFIEYYARAALRYRY---PAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVA 188
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLSSIRVVEGAVAETSALL- 192
+ +VG +A GN ++ KP+E A + + ++ E + + G E A L
Sbjct: 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLV 248
Query: 193 -DQKWDKICYTGNSRVARIVMAAA------AKHLTPVLLELGGKSPVVFDSGINLKVACR 245
+ I +TG+ V + AA +E GGK+ ++ D + +A
Sbjct: 249 EHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAE 308
Query: 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSN 305
+++ +G GQ C + +I T+ +LE + E E+ DL +V++
Sbjct: 309 GVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAE 367
Query: 306 HFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 364
++ ++ K G++V GG+R + + IAPT+ +VP + I EEIFGP+L ++
Sbjct: 368 QERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427
Query: 365 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
V ++ ++ N L +++ ++ + G L N +
Sbjct: 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGAL 479
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 157 bits (397), Expect = 9e-44
Identities = 90/406 (22%), Positives = 168/406 (41%), Gaps = 11/406 (2%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ + + + + SY R + L + +L + I L +++ K +
Sbjct: 40 EVDYV---YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 96
Query: 75 SIYEVALLKT-SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
V + + + E + A + EP G+VL ISP+NYP
Sbjct: 97 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156
Query: 134 LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLSSIRVVEGAVAETSALL 192
L+ + A+ AGN + KP S LLA+ E + + G +E +
Sbjct: 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216
Query: 193 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250
Q + I +TG++ + + A + P++LELGGK + +L++ + +I G
Sbjct: 217 VEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274
Query: 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 310
+G +GQ C + ++ + A +L+E ++ ++ NP + D++ ++++ +
Sbjct: 275 AFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYV 333
Query: 311 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 370
L +D E + I P L V D + EE FGP+LPI+ V +E+
Sbjct: 334 EGL-INDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 392
Query: 371 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
+ +I N L A +FTN+ E + G + IN+
Sbjct: 393 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGT 438
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 130 bits (327), Expect = 6e-34
Identities = 72/407 (17%), Positives = 153/407 (37%), Gaps = 9/407 (2%)
Query: 15 DAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELE 73
+ E + L S + R++ L+ ++ + L + KP+
Sbjct: 53 EVERT---LDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA 109
Query: 74 SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
+ A + + L K + T + + EP GVV I+P+NYP
Sbjct: 110 AVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 169
Query: 134 LLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLD 193
+++ + + GNA+V+KPS P +++ K + + + + + +
Sbjct: 170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIV 229
Query: 194 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 253
+ + ++ELGG P + +L +A ++ G +
Sbjct: 230 ADDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS 289
Query: 254 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSK 312
GQ C + ++ + KL+E + L + +P + D+ +++ + +
Sbjct: 290 -YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMA 348
Query: 313 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIE 369
++D G V G R + PTL+ +D ++ E+F P+ + V ++
Sbjct: 349 AIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLD 408
Query: 370 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVI 416
+ ++ N L A +F + ++ V + G + IND H I
Sbjct: 409 QAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGI 455
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 84.3 bits (207), Expect = 2e-18
Identities = 52/404 (12%), Positives = 127/404 (31%), Gaps = 51/404 (12%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSIYE 78
K++R + + + + +K + + L+ER +I++A R D++K ES +
Sbjct: 7 AKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDR 66
Query: 79 VALLKTSIKSA---LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLL 135
+AL I + + P I + I + +
Sbjct: 67 LALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNV 126
Query: 136 SLDPVVGAIAAGNALVLKPSEVAPASSSL----LAKLVGEYMDLSSIRVVEGAVAETSAL 191
+++ + A+ +GN ++L+ A S+ + + + E S + L
Sbjct: 127 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVL 186
Query: 192 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
+ + R +++ + T +LE G + +F +I+
Sbjct: 187 EMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINA 246
Query: 252 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 311
G + ++ K + + K+ +E + +
Sbjct: 247 KTQRPGTCNAAEKLLVHEKIA-----KEFLPVIVEELRKHGVEVRGCEKT---------- 291
Query: 312 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 371
++ +V E D E ++ I V ++++
Sbjct: 292 -----REIVPDVVPATEDD--------------------WPTEYLDLIIAIKVVKNVDEA 326
Query: 372 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415
+ I + + + T N ++FV + A + +N +
Sbjct: 327 IEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFT 370
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.5 bits (169), Expect = 2e-13
Identities = 55/384 (14%), Positives = 112/384 (29%), Gaps = 49/384 (12%)
Query: 45 LKSLMKMLNEREPDIVDALRQDLDKPE---LESSIYEVALLKT-----SIKSALKELKHW 96
L + L I +A + DL + L S+ + L + +K++
Sbjct: 31 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAEL 90
Query: 97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156
P + V +++ + + + +I +GNA +LK +
Sbjct: 91 EDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGK 150
Query: 157 VAPASSSLLAKLVGEYMDLS-----------SIRVVEGAVAETSALLDQKWDKICYTGNS 205
+ + +AK+V + + + V++ + + N+
Sbjct: 151 ESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNA 210
Query: 206 RVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 265
V +I PVL G + D +L A R + K N C + +
Sbjct: 211 LVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAK--TNYPAGCNAMET 264
Query: 266 IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 325
++ ++ LE + K
Sbjct: 265 LLINPKFSKWWEVLENLTLEG------------------------GVTIHATKDLKTAYF 300
Query: 326 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 385
+ KL A + +E L V E + IN+ +
Sbjct: 301 DKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDA 360
Query: 386 LFTNNKKLKQQFVETVSAGGLVIN 409
+ T NK ++F++ V + G+ N
Sbjct: 361 IVTENKANAEKFMKGVDSSGVYWN 384
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 65.9 bits (159), Expect = 3e-12
Identities = 55/425 (12%), Positives = 118/425 (27%), Gaps = 35/425 (8%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
+ A + + R S L+++ L R DI+ + PE+
Sbjct: 27 EVNQA---ATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 83
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPW 129
+ E+A ++ + + + + G V +
Sbjct: 84 TG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS 142
Query: 130 NYPFL--LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRV 180
N+P + A+AAG +++K P +S ++A+ + + ++
Sbjct: 143 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 202
Query: 181 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG--- 237
+ + + + +TG+ R + A + P+ +
Sbjct: 203 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 262
Query: 238 -INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK 296
+ + E + S
Sbjct: 263 MRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA-----FIETAQSLIRQQSPST 317
Query: 297 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIF 356
L+ + ++ +++ DD + + + R EEIF
Sbjct: 318 LLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSS--ENWRKHPAWEEEIF 375
Query: 357 GPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ--QFVETV--SAGGLVIND-- 410
GP I+ + + D + L A + + Q Q + + AG LV N
Sbjct: 376 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWP 435
Query: 411 TAVHV 415
T V V
Sbjct: 436 TGVEV 440
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 434 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.11 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=7.4e-86 Score=669.21 Aligned_cols=423 Identities=23% Similarity=0.306 Sum_probs=389.0
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei 79 (434)
.+++.+++++.++.+|++.|+++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+
T Consensus 37 ~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev 116 (494)
T d1bxsa_ 37 ATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDL 116 (494)
T ss_dssp TTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhh
Confidence 36788999999999999999999999996 699999999999999999999999999999999999999998766789
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCCh
Q 013901 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (434)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~ 159 (434)
..+++.+++++...+.+.... .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 117 ~~~~~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp 192 (494)
T d1bxsa_ 117 GGCIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTP 192 (494)
T ss_dssp HHHHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred hhhhHHHHHHhhhhhhhccee-ecC---CCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCCh
Confidence 999999999888777654322 111 1245678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc-ccCceEEecCCCCceEEc
Q 013901 160 ASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 160 ~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~-~~~p~~~e~gG~~~~iv~ 235 (434)
.++..+++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|.||||+.+|+.|.+.+++ ++||+++|+|||||+||+
T Consensus 193 ~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~ 272 (494)
T d1bxsa_ 193 LTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVF 272 (494)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEEC
Confidence 9999999999999 999999999995 56788999997 9999999999999999998875 689999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++
T Consensus 273 ~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i 351 (494)
T d1bxsa_ 273 ADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLI 351 (494)
T ss_dssp TTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred cCcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999995 588999999999999999999
Q ss_pred HHhh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 315 DDDK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
++++ +|+++++||.. ...|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 352 ~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~ 431 (494)
T d1bxsa_ 352 ESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDID 431 (494)
T ss_dssp HHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 9995 67899999875 456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
.++++++++++|+|+||++..+.. .| +..+.||+||++
T Consensus 432 ~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~ 471 (494)
T d1bxsa_ 432 KAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGREL 471 (494)
T ss_dssp HHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhh
Confidence 999999999999999998765542 22 556888888873
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=3.9e-85 Score=663.87 Aligned_cols=422 Identities=23% Similarity=0.336 Sum_probs=393.0
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 44 ~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~ 122 (503)
T d1a4sa_ 44 ATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAA 122 (503)
T ss_dssp TTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhh
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++....+......... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 123 ~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 198 (503)
T d1a4sa_ 123 WQCIEYYAGLAPTLSGQHIQL----PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198 (503)
T ss_dssp HHHHHHHHHHGGGCCEEEEEC----GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHH
T ss_pred hhccccccccccccccccccc----CCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 999999988877654432211 2345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+++|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 199 ~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl 278 (503)
T d1a4sa_ 199 VILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCEL 278 (503)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccH
Confidence 9999999998 99999999999889999999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|++++++|||++++++|++++.+.++++++|+|. +.+++||++++.+++++.++++++.
T Consensus 279 ~~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~ 357 (503)
T d1a4sa_ 279 ENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKK 357 (503)
T ss_dssp HHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred hCCeeeecCccC-------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 319 VSGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 319 ~~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
+|+++++||... ..|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 358 ~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~ 437 (503)
T d1a4sa_ 358 EGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437 (503)
T ss_dssp HTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBH
T ss_pred cCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 688999998742 3688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
+.++++++++++|+|+||+++++.. .| +..+.||+||+.
T Consensus 438 ~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 478 (503)
T d1a4sa_ 438 SRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478 (503)
T ss_dssp HHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcch
Confidence 9999999999999999999765442 22 446888888873
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=6.9e-85 Score=661.61 Aligned_cols=422 Identities=24% Similarity=0.310 Sum_probs=387.5
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei 79 (434)
++++.+++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||..++...|+
T Consensus 37 ~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev 116 (494)
T d1o04a_ 37 STGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 116 (494)
T ss_dssp TTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHH
Confidence 36788999999999999999999999985 599999999999999999999999999999999999999999876799
Q ss_pred HHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCCh
Q 013901 80 ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (434)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~ 159 (434)
..++..++++++..+.+..... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 117 ~~~~~~~~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 192 (494)
T d1o04a_ 117 DMVLKCLRYYAGWADKYHGKTI-PI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 192 (494)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHhcCcee-cc---CCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCc
Confidence 9999999999888776543221 11 1245678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEc
Q 013901 160 ASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 160 ~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~ 235 (434)
.++..+.+++.++ +|+|++|+++|+ .+.++.|+.|+ +|.|.||||+.+|+.+.+.++ +++||+++|+||+||+||+
T Consensus 193 ~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~ 272 (494)
T d1o04a_ 193 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIM 272 (494)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEc
Confidence 9999999999998 999999999995 56789999997 999999999999999988775 6889999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||+|.|++.+++++| +|+||.|++++++|||++++++|++.+++++.++++|+|. +.+++||++++.+++++.+++
T Consensus 273 ~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 351 (494)
T d1o04a_ 273 SDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYI 351 (494)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHH
T ss_pred cCccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 478999999999999999999
Q ss_pred HHhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 315 DDDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
++++ +|+++++||... +.|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 352 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~ 431 (494)
T d1o04a_ 352 NTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLD 431 (494)
T ss_dssp HHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHH
Confidence 9985 678999999764 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
+++++++++++|+|+||++..+.. .| +..+.||+||+
T Consensus 432 ~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~ 470 (494)
T d1o04a_ 432 KANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 470 (494)
T ss_dssp HHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCch
Confidence 999999999999999998665542 22 34677777776
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.8e-84 Score=660.46 Aligned_cols=422 Identities=20% Similarity=0.305 Sum_probs=390.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++..|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 61 tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 139 (516)
T d1uzba_ 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-hhHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..+++++.....+........ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~ 217 (516)
T d1uzba_ 140 DFIEYYARAALRYRYPAVEVV--PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHhhhhcccccc--cccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHH
Confidence 999999988877654332211 123456678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv 234 (434)
.+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.||||..+|+.+.+.++ .++||+++|+|||||+||
T Consensus 218 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV 297 (516)
T d1uzba_ 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceee
Confidence 999999998 99999999999 567899999997 999999999999999999887 568999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i 314 (434)
++|||+|.|++.+++++| .|+||.|++++++|||++++++|++++++++.++++|+.++++++||++++.+++++.+++
T Consensus 298 ~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i 376 (516)
T d1uzba_ 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred ecchhHHHHHHHHhhhhc-ccCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999667788999999999999999999
Q ss_pred HHhhhCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||.. +..|+|++|||+.++++++++++||+||||++|++|+|++||++++|+++|||++||||+|.++
T Consensus 377 ~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~ 456 (516)
T d1uzba_ 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHH
Confidence 999776666677664 5579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhhh----hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIML----ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~~ 429 (434)
++++++++++|+|+||+++++...+ +..+.||+||+
T Consensus 457 ~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~ 496 (516)
T d1uzba_ 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK 496 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCC
T ss_pred HHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcc
Confidence 9999999999999999987765433 45688899886
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.2e-84 Score=654.38 Aligned_cols=423 Identities=22% Similarity=0.313 Sum_probs=380.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..++...++..+.
T Consensus 26 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~ 105 (474)
T d1wnda_ 26 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 105 (474)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhccccccc
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999755666555
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..++++....+...... ......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 106 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~ 182 (474)
T d1wnda_ 106 DVFRFFAGAARCLNGLA---AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 182 (474)
T ss_dssp HHHHHHHHHTTCCEEEC---BEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred ccccccccccccccccc---cccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHH
Confidence 55555444333221111 111123467789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++++++|+|++|+++|+ .+.++.|++|+ +|.|.||||+++|+.+.+.+++++||+++|+|||||+||++|||++
T Consensus 183 ~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~ 262 (474)
T d1wnda_ 183 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 262 (474)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhh
Confidence 999999989999999999994 56789999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|++++++|||++++|+|+++|++++.+++.|+|. +++++||++++.+.+++.++++++. .
T Consensus 263 ~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 341 (474)
T d1wnda_ 263 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 341 (474)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999996 5789999999999999999999996 4
Q ss_pred CC-eeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 SG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~~-~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
|+ .++.|+.. ...|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 342 ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~ 421 (474)
T d1wnda_ 342 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 421 (474)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHH
Confidence 55 45666655 34689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||++..+.. .| +..+.||+||+.
T Consensus 422 ~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 456 (474)
T d1wnda_ 422 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 456 (474)
T ss_dssp HHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHhCCccEEEEeCCCCccCCCCcccccccccCccC
Confidence 9999999999998765432 22 456788888873
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-79 Score=614.51 Aligned_cols=406 Identities=44% Similarity=0.720 Sum_probs=371.0
Q ss_pred HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 013901 19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98 (434)
Q Consensus 19 v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~~~~~~~~~ 98 (434)
++++++.||+||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..++...|+..+++.++++++++..+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999999999999999999999999999878999999999999999988877
Q ss_pred ccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcE
Q 013901 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178 (434)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v 178 (434)
+..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+.+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~ 161 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY 161 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence 65444333334556788999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCCC
Q 013901 179 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 258 (434)
Q Consensus 179 ~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq 258 (434)
+++.+.......+..+++|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ 240 (446)
T d1ad3a_ 162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQ 240 (446)
T ss_dssp EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTC
T ss_pred ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCC
Confidence 99988777666676666999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccc
Q 013901 259 ACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA 337 (434)
Q Consensus 259 ~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~ 337 (434)
.|+++++||||++++++|+++|.++++.+ +|+| ++.+++||++++.+.+++.+++++ ++...|+..+..++|+.
T Consensus 241 ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~----a~~~~g~~~~~~~~~~~ 315 (446)
T d1ad3a_ 241 TCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN----QKVAHGGTWDQSSRYIA 315 (446)
T ss_dssp CTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT----SCEEECCCEETTTTEEC
T ss_pred ccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc----hhcccceeecCCCCCcC
Confidence 99999999999999999999999999887 5666 568999999999999998877653 44555555566789999
Q ss_pred cEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEECCCchhhhh
Q 013901 338 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIM 417 (434)
Q Consensus 338 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 417 (434)
|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|+|+||+.+++...
T Consensus 316 Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~ 395 (446)
T d1ad3a_ 316 PTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITV 395 (446)
T ss_dssp CEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGC
T ss_pred CEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877655
Q ss_pred hh----hhhhcCCCCcc
Q 013901 418 LA----LLKNHTLLRSC 430 (434)
Q Consensus 418 ~~----~~~~~~~~~~~ 430 (434)
+. ..+.||+||++
T Consensus 396 ~~~PfGG~k~SG~G~~~ 412 (446)
T d1ad3a_ 396 PTLPFGGVGNSGMGAYH 412 (446)
T ss_dssp TTSCCCCCGGGEECCCS
T ss_pred CCCCccccccceeccch
Confidence 43 45778888874
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=7.6e-77 Score=603.96 Aligned_cols=421 Identities=20% Similarity=0.311 Sum_probs=377.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++.++.+|+++|++.|++|++ .|+++|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 39 t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~ 117 (499)
T d1ky8a_ 39 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 117 (499)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcc
Confidence 6788999999999999999999998887 69999999999999999999999999999999999999999996 799999
Q ss_pred HHHHHHHHHHHHhhccccccc-cccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 83 KTSIKSALKELKHWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
++.++++...++++....... ......+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.++.+
T Consensus 118 i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~ 197 (499)
T d1ky8a_ 118 VDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 197 (499)
T ss_dssp HHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred cccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhh
Confidence 999999888777654332211 1112233567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+..+.+++.++ +|.++++++.++.+.+..|+.|+ ++.+.||||...++.+.+.+. .+|+++|+|||||+||++|||
T Consensus 198 ~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lElgG~np~iV~~dAd 275 (499)
T d1ky8a_ 198 AAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDAD 275 (499)
T ss_dssp HHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSC
T ss_pred hhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEecCCCCeEEEcCCcC
Confidence 99999999999 89999999988888889999887 999999999999999998765 489999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||+++++++++++++++++.
T Consensus 276 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 354 (499)
T d1ky8a_ 276 LDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAV 354 (499)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5789999999999999999999995
Q ss_pred -hCCeeeecCccCCCCcccccEEEE---eCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLL---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|++++.||...... +..++++. ++.+||++++||+||||++|++|+|.+||++++|++++||++||||+|.+++
T Consensus 355 ~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~ 433 (499)
T d1ky8a_ 355 EKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433 (499)
T ss_dssp HTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHH
T ss_pred HcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence 678999988765333 33333333 3567999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhh--hh-hhhhhcCCCCc
Q 013901 395 QQFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLRS 429 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~~ 429 (434)
+++++++++|+|+||+++++.. .| +..+.||+||+
T Consensus 434 ~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~ 471 (499)
T d1ky8a_ 434 RRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFRE 471 (499)
T ss_dssp HHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCB
T ss_pred HHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCC
Confidence 9999999999999999887652 12 35577788776
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.2e-74 Score=585.80 Aligned_cols=421 Identities=22% Similarity=0.308 Sum_probs=379.9
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+.+|+++|+++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+||+..+++ .|+..+
T Consensus 25 ~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~-~e~~~~ 103 (474)
T d1euha_ 25 ASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRT 103 (474)
T ss_dssp TTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhc-cccchh
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHHHHhhcccccccc--ccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 83 KTSIKSALKELKHWMTPEKAKT--SITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
+..++++............... .....+...+++++|+|||++|+|||||+...+..+++||++||+||+|||+.+|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~ 183 (474)
T d1euha_ 104 AEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 183 (474)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHH
T ss_pred HHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchH
Confidence 9999988877665433221111 11223345678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
++.++++++.++ +|+|++|+++++ .+.++.|++|+ ++.|.||||..+++.+.+.++ .+|+++|+||+||+||++|
T Consensus 184 ~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~d 261 (474)
T d1euha_ 184 SGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLED 261 (474)
T ss_dssp HHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEEecCCcceEEEECC
Confidence 999999999998 999999999996 66889999997 999999999999999998865 5899999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHh
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|++.++++...++.+++.+..+++|+......+++.+.+.+.
T Consensus 262 Adl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (474)
T d1euha_ 262 ADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDA 340 (474)
T ss_dssp SCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccccccccchHHHHHHHHHHHhh
Confidence 999999999999999 9999999999999999999999999999999999999998878899999999999999999877
Q ss_pred h-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 318 K-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
. .++..+.++. ..|+|++|||+..++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+++
T Consensus 341 ~~~~~~~~~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~ 418 (474)
T d1euha_ 341 NDKGATALTEIK--REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418 (474)
T ss_dssp HHTTCEECSCCC--EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHH
T ss_pred hcccccccccCC--CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHH
Confidence 5 4555554433 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhhhh--h-hhhhhcCCCCc
Q 013901 397 FVETVSAGGLVINDTAVHVIM--L-ALLKNHTLLRS 429 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~~~--~-~~~~~~~~~~~ 429 (434)
+++++++|+|+||+++.+... | +..+.||+||+
T Consensus 419 ~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~ 454 (474)
T d1euha_ 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQ 454 (474)
T ss_dssp HHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCB
T ss_pred HHHhCCEEEEEEECCCCCCCCCCCccccccCccCcc
Confidence 999999999999997766532 2 34577788876
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=5.4e-71 Score=559.91 Aligned_cols=398 Identities=17% Similarity=0.200 Sum_probs=335.3
Q ss_pred ccchhh-cccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
++|.++ +++.++..|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 12 tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-~Ev~~~ 90 (504)
T d1ez0a_ 12 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 90 (504)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 677887 799999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHhhccccccc-----cccccCCCcceEeeecceEEEEEcCCchhHHhhH--hHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKHWMTPEKAK-----TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~vVlkps 155 (434)
++.++++++.++......... ..........+.++.|+|||++|+|||||+.... +++++||++||+||+|||
T Consensus 91 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs 170 (504)
T d1ez0a_ 91 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 170 (504)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCc
Confidence 999999999888754433211 1111223456788889999999999999996544 589999999999999999
Q ss_pred CCChHHHHHHHHHH----Hhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCce--EEec
Q 013901 156 EVAPASSSLLAKLV----GEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV--LLEL 226 (434)
Q Consensus 156 ~~~~~~~~~l~~~~----~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~--~~e~ 226 (434)
+.+|.++..+.+++ .++ +|+|++|+++| +.+.++.|++|+ |+.|.||||+.+|+.+.+.++++++|+ ++|+
T Consensus 171 ~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~El 250 (504)
T d1ez0a_ 171 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 250 (504)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred ccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccccccccccc
Confidence 99999887776554 455 89999999999 467789999997 999999999999999999999988765 5599
Q ss_pred CCCCceEEcCCCCHHHHH--HHHHHHhcccCCCCccCCCCEEEEeCCcH-HHHHHHHHHHHhcccCCCCCCCCcccccCC
Q 013901 227 GGKSPVVFDSGINLKVAC--RRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLESKDLSRIVN 303 (434)
Q Consensus 227 gG~~~~iv~~dad~~~aa--~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~ 303 (434)
|||||+||++|||+++|+ ..++.++| .|+||.|++++++||+++.+ +.|++.+++.++.. ++.+.+||+++
T Consensus 251 GGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~gp~i~ 324 (504)
T d1ez0a_ 251 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ-----SPSTLLTPGIR 324 (504)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC-----CCBCCSSHHHH
T ss_pred cccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhhc-----ccccccccchh
Confidence 999999999999999885 47999999 99999999999999888865 46777766665542 23578999998
Q ss_pred HHHHHHHHHHHHHhh-hCCeeeecCccCCCCcccccEEEEe---CCCCCCccccccccceeeEeecCCHHHHHHHHhcCC
Q 013901 304 SNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLD---VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (434)
Q Consensus 304 ~~~~~~~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~---~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 379 (434)
..+.+++ ++.+. .+.++..||. .+.+..|+++.. +..++++++||+||||++|++|+|++||++++|+++
T Consensus 325 ~~~~~~v---i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~ 398 (504)
T d1ez0a_ 325 DSYQSQV---VSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLA 398 (504)
T ss_dssp HHHHHHH---HHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCC
T ss_pred hhhhhhh---hhhhhhhhhhcccccc---cccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCC
Confidence 8887665 44444 4456666654 344555555543 334678999999999999999999999999999999
Q ss_pred CCcEEEEecCC--HHHHHHHHhhcc--eeeEEECCCchh
Q 013901 380 KPLAAYLFTNN--KKLKQQFVETVS--AGGLVINDTAVH 414 (434)
Q Consensus 380 ~gl~~~i~t~d--~~~~~~~~~~~~--~g~v~iN~~~~~ 414 (434)
|||+++|||+| ..++.+++++++ +|+|+||++++.
T Consensus 399 ~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG 437 (504)
T d1ez0a_ 399 GSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 437 (504)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred CCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCccc
Confidence 99999999975 458899999987 899999987653
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.5e-57 Score=449.17 Aligned_cols=353 Identities=15% Similarity=0.173 Sum_probs=274.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH--HHH---HHHHHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE--VAL---LKTSIKSALKE 92 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e--i~~---~~~~~~~~~~~ 92 (434)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..++. .| +++ ....+...++.
T Consensus 2 e~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999999999999987753 23 111 11223333333
Q ss_pred HHhhcccc---ccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH
Q 013901 93 LKHWMTPE---KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 93 ~~~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~ 169 (434)
++.+.... ..............+.+.|+|+++++.|||||+..+++++++||++||+||+|||+.+|.++..+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~ 160 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAI 160 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHH
Confidence 33332211 111111122345677888999999999999999999999999999999999999999999999999999
Q ss_pred Hhh-cCCC----cEEEEeC-ChHhHHHHhcCC--CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCC-ceEEcCCCCH
Q 013901 170 GEY-MDLS----SIRVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS-PVVFDSGINL 240 (434)
Q Consensus 170 ~~a-lp~g----~v~~i~~-~~~~~~~L~~~~--v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~-~~iv~~dad~ 240 (434)
.++ .|.+ +++.+.+ ..+....++.++ .....++|+ ..+.+.++++.+++++|+||+| ++||++|||+
T Consensus 161 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 161 REALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGG----YGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSC----HHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HhhhhhccccccccccccccchhhhhhcccccccCeEEEcccH----HHHHHHhhhccccceecccCCCCCeecccccch
Confidence 887 4444 4666665 455666666553 444444443 4455666666777788887755 5788899999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhC
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 320 (434)
+.|++.++.++| .| ||.|+++++++||+++|++|++.|.+...+..++.+. .+..
T Consensus 237 ~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~~~-------------- 291 (414)
T d1o20a_ 237 KKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CEKT-------------- 291 (414)
T ss_dssp HHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CHHH--------------
T ss_pred hhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------chhh--------------
Confidence 999999999988 66 9999999999999999999999999998886554321 1100
Q ss_pred CeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q 013901 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400 (434)
Q Consensus 321 ~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~ 400 (434)
.++.+.+..... ..+.+|+||||++|++|+|++|||+++|+++|||+++|||+|.+++++|+++
T Consensus 292 -------------~~~~~~~~~~~~---~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~ 355 (414)
T d1o20a_ 292 -------------REIVPDVVPATE---DDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSE 355 (414)
T ss_dssp -------------HHHSTTSEECCG---GGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHH
T ss_pred -------------hhhcccceeccc---ccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHh
Confidence 011111121212 2367999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEECCCchhhh
Q 013901 401 VSAGGLVINDTAVHVI 416 (434)
Q Consensus 401 ~~~g~v~iN~~~~~~~ 416 (434)
+++|.|+||+++.+..
T Consensus 356 i~~G~V~IN~~~~~~~ 371 (414)
T d1o20a_ 356 IDAAAVYVNASTRFTD 371 (414)
T ss_dssp CCSSEEEESSCGGGCS
T ss_pred CCeeEEEEeCCCcCCC
Confidence 9999999999876643
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.9e-50 Score=399.51 Aligned_cols=379 Identities=18% Similarity=0.168 Sum_probs=258.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHh------hcCCCchhhhHHHHHHH-HHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQ------DLDKPELESSIYEVALL-KTSIKSAL 90 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a~~~ei~~~-~~~~~~~~ 90 (434)
.+++.++.|++|++.|+.+|.++|.++|+++++.|++++++|+++..+ +.|++. +..+.+... .+.++..+
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~--~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLAD--SLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCH--HHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcH--HHHHHHhcCchHHHHHHH
Confidence 477889999999999999999999999999999999999999886444 444432 211111000 01122222
Q ss_pred HHHH---hhccccc--cccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHH
Q 013901 91 KELK---HWMTPEK--AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLL 165 (434)
Q Consensus 91 ~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l 165 (434)
+.++ .+.++.. ........+...+.++.|+||+++| |+++| ..++...++||++||+||+||++.++.+...+
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 2222 2211110 0111112334567788899999988 56667 56677889999999999999999999998888
Q ss_pred HHHHH--------hh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 166 AKLVG--------EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 166 ~~~~~--------~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
.++++ ++ +|+++++++++..+....|..|+ +|.|+||||....+.+.+.+. +|++.++||++|+||+
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEEC
T ss_pred HHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeec
Confidence 77664 44 89999999988777778888887 999999999998888776654 6999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+|||+++|++.++.++| .++|+ |++.++++||+++++.|...+......- + .+. .++.........+.
T Consensus 237 ~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g-v-------~l~--~~~~~~~~~~~~~~ 304 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG-V-------TIH--ATKDLKTAYFDKLN 304 (436)
T ss_dssp TTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHC-C-------CBE--ECHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCC-c-------EEE--eCHHHHHHhhhhhh
Confidence 99999999999999999 88886 8899999999999988866554443331 0 010 11222111111111
Q ss_pred HhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 316 ~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
.. |.. .+....|++....+.+ +.+|.|+|+++|++|+|++|||+++|++++|||++|||+|.+.++
T Consensus 305 ---~~------~~~--~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~ 370 (436)
T d1vlua_ 305 ---EL------GKL--TEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAE 370 (436)
T ss_dssp ---HH------TCC--CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHH
T ss_pred ---hc------ccc--cccccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHH
Confidence 11 111 1223334443332222 689999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhhhhhhhhhcCCCCc-cccc
Q 013901 396 QFVETVSAGGLVINDTAVHVIMLALLKNHTLLRS-CICT 433 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~~~~~~~~~~~~~~-~~~~ 433 (434)
+|++++++|.|+||.++.+.-...+ |+|+| ++.|
T Consensus 371 ~F~~~vda~~V~vNasTrf~Dg~~~----g~g~e~Gist 405 (436)
T d1vlua_ 371 KFMKGVDSSGVYWNASTRFADGFRY----GFGAEVGIST 405 (436)
T ss_dssp HHHHHCCCSEEEESSCGGGCC------------------
T ss_pred HHHHhCCceEEEEcCCCccCCCCcc----cCcceeeEec
Confidence 9999999999999999987543211 56665 5543
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.51 Score=43.39 Aligned_cols=318 Identities=17% Similarity=0.184 Sum_probs=174.8
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcccccccc
Q 013901 37 SYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT 104 (434)
Q Consensus 37 ~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ei~~~--------~~~~~~~~~~~~~~~~~~~~~~ 104 (434)
..+...+.++.+-+.++++-|.-+...++...+- +.-+ ..|+..+ .+.++.+.++.+.|...+....
T Consensus 25 ~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs-~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~ 103 (431)
T d1k75a_ 25 ASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPP 103 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3344555666777777777777666666665422 1112 1355443 3345555666666665553222
Q ss_pred c-cc-cCCCcceEeeecceEEEEEcCCc---hhHHhhHhHHHHHHhhCCEE--EEeCCCCChHHHHHHHHHHHhhcCCCc
Q 013901 105 S-IT-TFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNAL--VLKPSEVAPASSSLLAKLVGEYMDLSS 177 (434)
Q Consensus 105 ~-~~-~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~v--Vlkps~~~~~~~~~l~~~~~~alp~g~ 177 (434)
. .. ..+.....++.|+--|+++.|.- ||- +.+..++||-.+|..= +..|+...|.+ |+ .+.-.|+
T Consensus 104 ~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l~----aa~~~Gv 175 (431)
T d1k75a_ 104 VDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY----AAQLCGV 175 (431)
T ss_dssp EEEEEETTEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH----HHHHTTC
T ss_pred ceeeccCCceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcchH---HH----HHHHcCc
Confidence 1 11 23345567788999999999974 444 4555689999999864 45566545432 21 1111232
Q ss_pred EEEEe-CChHhHHHHh---cC--CCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCc--eEEcCCCCHHHHHHHHHH
Q 013901 178 IRVVE-GAVAETSALL---DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--VVFDSGINLKVACRRMIM 249 (434)
Q Consensus 178 v~~i~-~~~~~~~~L~---~~--~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~--~iv~~dad~~~aa~~i~~ 249 (434)
=.+.. |+.+...+|. +. +||.|+=.|+.=+...=.+-......--+=-..|.+= +|-++++|.+.++-.++.
T Consensus 176 ~~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDlla 255 (431)
T d1k75a_ 176 QDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLS 255 (431)
T ss_dssp CEEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred cceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEEEEecCCCCHHHHHHHHHh
Confidence 23332 3445556663 22 3999998887665432222222110011111245554 344667899999998888
Q ss_pred HhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCcc
Q 013901 250 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (434)
Q Consensus 250 ~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~ 329 (434)
-+= .+.. .+.++|..+ .++.+.+.+++.+..-..| ..+. .++.+
T Consensus 256 QAE-H~~~-----a~~ilvt~~--~~l~~~v~~~i~~~l~~l~----------r~~i---~~~s~--------------- 299 (431)
T d1k75a_ 256 QAE-HGPD-----SQVILLTPA--ADMARRVAEAVERQLAELP----------RAET---ARQAL--------------- 299 (431)
T ss_dssp HHT-TCTT-----CEEEEEESC--HHHHHHHHHHHHHHHHTCS----------SCHH---HHHHH---------------
T ss_pred ccC-Cccc-----ceeEEEecc--HHHHHHHHHHHHHHhhhch----------HHHH---HHhhh---------------
Confidence 876 4433 244667655 3444444444333210000 0000 00000
Q ss_pred CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-ceeeEEE
Q 013901 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVI 408 (434)
Q Consensus 330 ~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~-~~g~v~i 408 (434)
+.. .++.++|++|+++++|..-.-| ..|.++|.. .+...+ .+|.|++
T Consensus 300 ------------------------~~~----~ii~v~~~~ea~~~~N~~APEH-L~l~~~~~~---~~~~~i~nAGsIfl 347 (431)
T d1k75a_ 300 ------------------------NAS----RLIVTKDLAQCVEISNQYGPEH-LIIQTRNAR---ELVDSITSAGSVFL 347 (431)
T ss_dssp ------------------------TTC----EEEECSSHHHHHHHHHHHCCSE-EEEESTTHH---HHGGGCCCCSEEEE
T ss_pred ------------------------ccc----eEEEecCHHHHHHHHHhhhHHH-HHHHhcCHH---HHHhhhhhcchhhc
Confidence 111 1345799999999999954442 778888876 456665 5899999
Q ss_pred CCCchhhh------hhhhhhhcCCCCccc
Q 013901 409 NDTAVHVI------MLALLKNHTLLRSCI 431 (434)
Q Consensus 409 N~~~~~~~------~~~~~~~~~~~~~~~ 431 (434)
...+.-.. ..+.|.++|..|...
T Consensus 348 G~~sp~a~GDY~aGpnHvLPT~G~Ar~~s 376 (431)
T d1k75a_ 348 GDWSPESAGDYASGTNHVLPTYGYTATCS 376 (431)
T ss_dssp STTCCHHHHHHTSSSCCCCCCTTGGGTCC
T ss_pred CCCCcchhhccccCCCccCCCCCceeecC
Confidence 87553332 236667777777643
|