Citrus Sinensis ID: 013934

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
MSSSSAISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPNK
cccccHHHHHHHHHHHHHHHHHcccccccccEEEEcccccccEEEEEcccccEEEEcccEEEEEEccccccccccEEEEEEEccccccEEEEEcccccccccccEEEEcccccEEEEcccccEEEEcccccccccEEEEEccccEEEEcccccEEEEcccccccccccccccccccEEEEEEcccccccccccEEEEEcccccEEEEEcccccccEEEEcccccccccccccccEEEEccccccccccEEEEEEccccEEEEEEEccccEEEEEEEcccccEEEEEEEcccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEcccccHHHHHHHHccccccEEEEEcccccEEEEcccEEcEEEccccccEEEEEcccc
cccccEEHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccEEEccccEEEEEEEccccccccccEEEEEEEEccccEEEEEEccccccccccEEEEEccccEEEEEccccEEEEccccccccHHEEEcccccEEEEEccccEEEEEccccccccccccccccccccEEEccccccccccccEEEEEccccccHEEEEccccccEEEEEcccEEEEEccccccEEEccccccccccEEEEEEEccccEEEEEEEEcccEEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEEcccccccccHHHcccccEEcccccccccccccccccccccEEccccccccccEEEEccccccccccEEEEEccccHHHHHHHHHHccccEEEEcccccEEEEEcccHHHHHHHccccccEEEEEccc
MSSSSAISFSFFLLSSFLFFvanakvppsetfkfvnegefgpyvneydanyrmlsifnspfqlafynttPNAYTLALRLGLQRNEPLFLWVWEanrgkpvrenatfslgtdgnlvlaeadGTVVWQTNTANKGVVGFKLLsngnmvlydskgkfiwqsfdyptdtllagqslrvgGVTKLVSRLSaeenvdgpysfvmePKRAAMYykssnspepvlyftsydwfnardvslqnvtfnsrpetDEAVAFVQTLdssangnilarpkydstiSFLRLGidgnlkiytyydkvdwgptevtftlfdrdsswenecqlpercgkfglcdenqcvacptekgllgwskdcepkkvtscrpndfhyhkvegvdhymskytsgaaikvedcgrkctsdckclgyfyhqetsrcwiAYDLktltkfpnsthvgfikapnk
MSSSSAISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSrlsaeenvdgpysfVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTldssangnilarpkydstisFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTekgllgwskdcepkkvtscrpndfhyhkvEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLtkfpnsthvgfikapnk
MssssaisfsffllssflffVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPNK
******ISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYK*****EPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFI*****
****SAI*FSFFLLSSFLFFVANAKVPPSETFKFVN****************MLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPN*
MSSSSAISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPNK
***SSAISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPN*
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSSSAISFSFFLLSSFLFFVANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQLPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYTSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPNK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query433 2.2.26 [Sep-21-2011]
Q39688389 Epidermis-specific secret N/A no 0.812 0.904 0.584 1e-120
P17840435 S-locus-specific glycopro N/A no 0.713 0.710 0.275 4e-22
P17801 817 Putative receptor protein N/A no 0.725 0.384 0.260 1e-21
O65238 872 G-type lectin S-receptor- no no 0.695 0.345 0.248 2e-21
P22553435 S-locus-specific glycopro N/A no 0.750 0.747 0.268 2e-21
Q8RWZ5 821 G-type lectin S-receptor- no no 0.822 0.433 0.241 7e-20
Q39203 797 G-type lectin S-receptor- no no 0.773 0.420 0.250 7e-20
Q9FLV4 872 G-type lectin S-receptor- no no 0.861 0.427 0.260 5e-18
Q09092 857 Putative serine/threonine N/A no 0.725 0.366 0.263 9e-18
P22552444 S-locus-specific glycopro N/A no 0.665 0.648 0.283 1e-16
>sp|Q39688|EP1G_DAUCA Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  432 bits (1111), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/378 (58%), Positives = 270/378 (71%), Gaps = 26/378 (6%)

Query: 14  LSSFLFFV-----ANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNT 68
           L+  LFF+      +  VP +ETFKFVNEGE G Y++EY  +YR L  F SPFQL FYN 
Sbjct: 9   LTILLFFIQRIDFCHTLVPANETFKFVNEGELGQYISEYFGDYRPLDPFTSPFQLCFYNQ 68

Query: 69  TPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTN 128
           TP A+TLALR+GL+R E L  WVWEANRG PV ENAT + G DGNLVLA ++G V WQT+
Sbjct: 69  TPTAFTLALRMGLRRTESLMRWVWEANRGNPVDENATLTFGPDGNLVLARSNGQVAWQTS 128

Query: 129 TANKGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEE 188
           TANKGVVG K+L NGNMVLYDSKGKF+WQSFD PTDTLL GQSL++G VTKLVSR S  E
Sbjct: 129 TANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQSLKMGAVTKLVSRASPGE 188

Query: 189 NVDGPYSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNA--RDVSLQNVTFNSRPETDEA 246
           NV+GPYS VMEPK   +YYK + SP+P+ Y+ S+  F    ++ SLQNVTF    E D+ 
Sbjct: 189 NVNGPYSLVMEPKGLHLYYKPTTSPKPIRYY-SFSLFTKLNKNESLQNVTFEFENENDQG 247

Query: 247 VAFVQTL-----DSSANGNILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFT 301
            AF+ +L     +S    +IL R KY++T+SFLRL IDGN+KIYTY DKVD+G  EVT+T
Sbjct: 248 FAFLLSLKYGTSNSLGGASILNRIKYNTTLSFLRLEIDGNVKIYTYNDKVDYGAWEVTYT 307

Query: 302 LFDR------------DSSWENECQLPERCGKFGLCDENQCVACPTEKG-LLGWSKDCEP 348
           LF +              S  +ECQLP++CG FGLC+E+QCV CPT  G +L WSK CEP
Sbjct: 308 LFLKAPPPLFQVSLAATESESSECQLPKKCGNFGLCEESQCVGCPTSSGPVLAWSKTCEP 367

Query: 349 KKVTSCRPNDFHYHKVEG 366
            K++SC P DFHY+K+ G
Sbjct: 368 PKLSSCGPKDFHYNKLGG 385
May be involved in the limitation of water flow through the outer epidermal cell wall, either by direct modification of wall structure or as a signal instructing the protoplast to restrict water transport across the cell wall.
Daucus carota (taxid: 4039)
>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2 Back     alignment and function description
>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2 Back     alignment and function description
>sp|P22553|SLSG2_BRAOA S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description
>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1 Back     alignment and function description
>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 Back     alignment and function description
>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 Back     alignment and function description
>sp|P22552|SLSG1_BRAOA S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
383932356440 epidermis-specific secreted glycoprotein 0.946 0.931 0.682 1e-169
356549665435 PREDICTED: epidermis-specific secreted g 0.976 0.972 0.671 1e-169
359493788429 PREDICTED: epidermis-specific secreted g 0.967 0.976 0.665 1e-168
147834750444 hypothetical protein VITISV_035367 [Viti 0.974 0.950 0.657 1e-164
359493598444 PREDICTED: epidermis-specific secreted g 0.974 0.950 0.657 1e-164
224117046426 predicted protein [Populus trichocarpa] 0.969 0.985 0.658 1e-162
224117048426 predicted protein [Populus trichocarpa] 0.969 0.985 0.658 1e-161
449483158440 PREDICTED: epidermis-specific secreted g 0.946 0.931 0.661 1e-161
224114792428 predicted protein [Populus trichocarpa] 0.972 0.983 0.667 1e-161
224114796428 predicted protein [Populus trichocarpa] 0.972 0.983 0.667 1e-160
>gi|383932356|gb|AFH57275.1| epidermis-specific secreted glycoprotein EP1-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 286/419 (68%), Positives = 337/419 (80%), Gaps = 9/419 (2%)

Query: 22  ANAKVPPSETFKFVNEGEFGPYVNEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGL 81
           A A VPPSETF+FVN+GEFGP++ EY A+YR++SI N+PFQLAFYNTTPNA+TLALR+  
Sbjct: 24  AKAVVPPSETFRFVNDGEFGPFIVEYGADYRVISIANAPFQLAFYNTTPNAFTLALRMAT 83

Query: 82  QRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLS 141
            R+E LF WVWEANRG PVRENATFSLGTDGNLVLA+ADG + WQ+NTANK VVGF+LL 
Sbjct: 84  TRSESLFRWVWEANRGNPVRENATFSLGTDGNLVLADADGRIAWQSNTANKAVVGFQLLP 143

Query: 142 NGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEPK 201
           NGNMVL+DS GKFIWQSFD+PTDTLL GQSLR GG TKLVSR SA+ NV+G YS VMEPK
Sbjct: 144 NGNMVLHDSNGKFIWQSFDHPTDTLLVGQSLRAGGATKLVSRASAQNNVNGAYSLVMEPK 203

Query: 202 RAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLD------S 255
           +  + YK  NS +P++YF S  W N +D +LQ VT N   ET++  A+   LD      S
Sbjct: 204 QLVLQYKGMNSSKPLVYFKSSVWPNTQDGTLQTVTLNVE-ETNDGFAYDVLLDYTVANSS 262

Query: 256 SANGN-ILARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLFDRDSSWENECQ 314
              GN IL RPKY+ST+S LRLGIDGNL+++TYYDKVD    E TFTLF RDS W NEC+
Sbjct: 263 IGTGNLILTRPKYNSTLSILRLGIDGNLRVFTYYDKVDSQAWEETFTLFSRDSVWGNECE 322

Query: 315 LPERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKY 374
           LPERCG FGLC+ENQCVACP+  GLLGWS++C+ KKV +CRPNDF Y+K+EGV+H+MS+Y
Sbjct: 323 LPERCGNFGLCEENQCVACPSPNGLLGWSRNCQQKKV-NCRPNDFSYYKLEGVNHFMSQY 381

Query: 375 TSGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPNK 433
             G  IK  DCGRKCTSDC CLGYFYH+ETS+CWIA +LKTL K  NS+HVG+IKAPNK
Sbjct: 382 NEGEGIKESDCGRKCTSDCNCLGYFYHRETSKCWIANELKTLAKTSNSSHVGYIKAPNK 440

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356549665|ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Glycine max] Back     alignment and taxonomy information
>gi|359493788|ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147834750|emb|CAN75015.1| hypothetical protein VITISV_035367 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493598|ref|XP_002283208.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224117046|ref|XP_002317461.1| predicted protein [Populus trichocarpa] gi|222860526|gb|EEE98073.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117048|ref|XP_002317462.1| predicted protein [Populus trichocarpa] gi|222860527|gb|EEE98074.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449483158|ref|XP_004156509.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224114792|ref|XP_002316858.1| predicted protein [Populus trichocarpa] gi|222859923|gb|EEE97470.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224114796|ref|XP_002316859.1| predicted protein [Populus trichocarpa] gi|222859924|gb|EEE97471.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
TAIR|locus:2037508441 AT1G78850 [Arabidopsis thalian 0.944 0.927 0.513 2.6e-118
TAIR|locus:2037568443 AT1G78860 [Arabidopsis thalian 0.944 0.923 0.515 7.9e-117
TAIR|locus:4010713447423 AT1G16905 [Arabidopsis thalian 0.921 0.943 0.462 1.7e-98
UNIPROTKB|Q39688389 EP1 "Epidermis-specific secret 0.639 0.712 0.635 8.1e-92
TAIR|locus:2037548455 AT1G78830 [Arabidopsis thalian 0.764 0.727 0.454 3.5e-75
TAIR|locus:2037563455 AT1G78820 [Arabidopsis thalian 0.757 0.720 0.425 1.8e-69
TAIR|locus:2182603 872 AT5G35370 [Arabidopsis thalian 0.274 0.136 0.295 9.2e-20
TAIR|locus:2088619439 AT3G12000 [Arabidopsis thalian 0.729 0.719 0.280 4e-19
TAIR|locus:2116525 821 SD2-5 "S-domain-2 5" [Arabidop 0.411 0.216 0.317 4.5e-19
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.718 0.368 0.279 2.2e-17
TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
 Identities = 214/417 (51%), Positives = 293/417 (70%)

Query:    22 ANAKVPPSETFKFVNEGEFGPYVN-EYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLG 80
             + AKVP  + F+ VNEG +  Y   EY+ + R    F+  F+L FYNTTPNAYTLALR+G
Sbjct:    20 SQAKVPVDDQFRVVNEGGYTDYSPIEYNPDVRGFVPFSDNFRLCFYNTTPNAYTLALRIG 79

Query:    81 LQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLL 140
              +  E    WVWEANRG PV+ENAT + G DGNLVLAEADG +VWQTNTANKG VG K+L
Sbjct:    80 NRVQESTLRWVWEANRGSPVKENATLTFGEDGNLVLAEADGRLVWQTNTANKGAVGIKIL 139

Query:   141 SNGNMVLYDSKGKFIWQSFDYPTDTLLAGQSLRVGGVTKLVSRLSAEENVDGPYSFVMEP 200
              NGNMV+YDS GKF+WQSFD PTDTLL GQSL++ G TKLVSRLS   N +GPYS VME 
Sbjct:   140 ENGNMVIYDSSGKFVWQSFDSPTDTLLVGQSLKLNGRTKLVSRLSPSVNTNGPYSLVMEA 199

Query:   201 KRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFV-QTLDSSANG 259
             K+  +YY ++ +P+P+ YF  Y++F  +    Q++TF +  ++D     V + +DS +  
Sbjct:   200 KKLVLYYTTNKTPKPIAYF-EYEFFT-KITQFQSMTFQAVEDSDTTWGLVMEGVDSGSKF 257

Query:   260 NI---LARPKYDSTISFLRLGIDGNLKIYTYYDKVDWGPTEVTFTLF-DRDSSWENECQL 315
             N+   L+RPK+++T+SF+RL  DGN+++++Y         +VT+T F + D+   +EC++
Sbjct:   258 NVSTFLSRPKHNATLSFIRLESDGNIRVWSYSTLATSTAWDVTYTAFTNADTDGNDECRI 317

Query:   316 PERCGKFGLCDENQCVACPTEKGLLGWSKDCEPKKVTSCRPNDFHYHKVEGVDHYMSKYT 375
             PE C  FGLC + QC ACP++KGLLGW + C+   + SC P  FHY K+EG D +M+KY 
Sbjct:   318 PEHCLGFGLCKKGQCNACPSDKGLLGWDETCKSPSLASCDPKTFHYFKIEGADSFMTKYN 377

Query:   376 SGAAIKVEDCGRKCTSDCKCLGYFYHQETSRCWIAYDLKTLTKFPNSTHVGFIKAPN 432
              G++     CG KCT DCKCLG+FY++++SRCW+ Y+LKTLT+  +S+ V ++KAPN
Sbjct:   378 GGSSTTESACGDKCTRDCKCLGFFYNRKSSRCWLGYELKTLTRTGDSSLVAYVKAPN 434
GO:0005886 "plasma membrane" evidence=ISM
GO:0030246 "carbohydrate binding" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2037568 AT1G78860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713447 AT1G16905 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] Back     alignment and assigned GO terms
TAIR|locus:2037548 AT1G78830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037563 AT1G78820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39688EP1G_DAUCANo assigned EC number0.58460.81290.9048N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 9e-33
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 2e-32
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 3e-32
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 6e-09
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information 
 Score =  119 bits (300), Expect = 9e-33
 Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 4/119 (3%)

Query: 45  NEYDANYRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENA 104
           +   ++ + L    S F+L F+     +        +         VW ANR  P   + 
Sbjct: 1   SNPLSSGQTLVSSGSLFELGFFKLIMQS---RDYNLILYKGSSRTVVWVANRDNPSGSSC 57

Query: 105 TFSLGTDGNLVLAEADGTVVWQTNTAN-KGVVGFKLLSNGNMVLYDSKGKFIWQSFDYP 162
           T +L +DGNLV+ +  GTVVW +NT    G     LL +GN+VLYDS G F+WQSFDYP
Sbjct: 58  TLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 433
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.96
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.93
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.92
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.83
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.55
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.51
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.27
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.75
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.73
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.63
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.28
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 98.06
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 95.5
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 95.45
PF1429551 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. 94.96
cd0109980 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; pr 90.16
PF0827771 PAN_3: PAN-like domain; InterPro: IPR006583 PAN do 89.97
smart0060594 CW CW domain. 88.71
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.96  E-value=1.8e-30  Score=221.78  Aligned_cols=103  Identities=48%  Similarity=0.788  Sum_probs=76.4

Q ss_pred             eeEEEEeccCCcccc---CcEEEEcCCCcEEEEecCCcEEEEe-ccCCCc--eeEEEEeeCCCeeEeecCceEEEcccCC
Q 013934           88 FLWVWEANRGKPVRE---NATFSLGTDGNLVLAEADGTVVWQT-NTANKG--VVGFKLLSNGNMVLYDSKGKFIWQSFDY  161 (433)
Q Consensus        88 ~tvVW~ANr~~Pv~~---~~~l~l~~~GnLvL~~~~g~~vWst-~~~~~~--~~~~~L~d~GNLVl~~~~~~~lWqSFD~  161 (433)
                      +||||+|||++||..   ..+|.|+.||||+|+|..++++|++ ++.+.+  +..|+|+|+|||||+|..+++|||||||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~   81 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDY   81 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTS
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCC
Confidence            589999999999953   4799999999999999999999999 666554  7889999999999999999999999999


Q ss_pred             CCccccCCCceeecc----eeEEEEeCCCCCCC
Q 013934          162 PTDTLLAGQSLRVGG----VTKLVSRLSAEENV  190 (433)
Q Consensus       162 PTDTLLpGq~L~~~g----~~~L~S~~S~~dps  190 (433)
                      ||||+||||+|+.+.    ...|+||++.+|||
T Consensus        82 ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 PTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            999999999997631    13499999999986

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A Back     alignment and domain information
>cd01099 PAN_AP_HGF Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins Back     alignment and domain information
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>smart00605 CW CW domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 7e-14
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 3e-11
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 2e-12
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 1e-10
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 7e-12
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 7e-10
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 4e-11
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 3e-08
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 4e-11
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 6e-08
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 3e-10
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 1e-07
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 3e-07
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 2e-09
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 7e-08
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 3e-09
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 5e-09
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 3e-09
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-09
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 5e-09
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 1e-07
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 6e-09
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 2e-06
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 8e-08
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 8e-05
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
 Score = 66.8 bits (163), Expect = 7e-14
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 90  WVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK-GVVGFKLLSNGNMVLY 148
            VW +N G   ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V+Y
Sbjct: 39  SVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY 98

Query: 149 DSKGKFIWQSFDY 161
            S    IW +  Y
Sbjct: 99  GSD---IWSTGTY 108
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.98
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.75
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.71
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.71
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.68
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.68
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.65
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.63
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.6
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.59
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.57
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.44
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.44
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.37
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.33
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.29
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.23
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.22
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.22
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.17
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.14
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.09
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.05
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 94.04
3hms_A101 Hepatocyte growth factor; HGF/SF, hormone/growth f 89.19
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 88.56
4a5v_A161 MIC4, micronemal protein 4; adhesion; NMR {Toxopla 87.89
4a5v_A161 MIC4, micronemal protein 4; adhesion; NMR {Toxopla 83.09
3sp8_A 264 Hepatocyte growth factor alpha chain; kringle doma 80.98
2f83_A 625 Coagulation factor XI; protease, apple domain, hyd 80.24
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-39  Score=316.26  Aligned_cols=201  Identities=19%  Similarity=0.238  Sum_probs=148.2

Q ss_pred             ceEEEeCCCcEEEEEEeCCCCCeEEEEEEceecCCCceeEEEEeccCCcccc-----CcEEEEcCCCcEEE--EecCCcE
Q 013934           51 YRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRE-----NATFSLGTDGNLVL--AEADGTV  123 (433)
Q Consensus        51 ~~~l~s~~g~F~lGF~~~~~~~~~l~Iw~~~~~~~~~~tvVW~ANr~~Pv~~-----~~~l~l~~~GnLvL--~~~~g~~  123 (433)
                      ++.|+|++|.|+||||+.  ++.|+   |+   +  .+ +||+|||++||.+     +++|+|+.||||||  .|++|.+
T Consensus        26 ~~~l~S~~g~F~lgf~~~--~~~~l---y~---~--~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~Lvl~~~~~~~~~   94 (276)
T 3m7h_A           26 GQYLLSPNQRFKLLLQGD--GNLVI---QD---N--GA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRR   94 (276)
T ss_dssp             TCEEECTTSSEEEEECTT--SCEEE---EE---T--TE-EEEECSTTSTTEEEEECCCTTCCSEEEESSSEEEEEGGGTE
T ss_pred             CCEEEcCCCcEEEEEECC--CCeEE---EC---C--CC-eEEECCCCCCcCCcccccceEEEEeCCCcEEEEEeCCCCCE
Confidence            578999999999999943  34444   54   2  25 9999999999987     57899999999999  7888999


Q ss_pred             EEEeccCC------CceeEEEEeeCCCeeEeecCceEEEcccCCCCccccCCCc----eeecceeEEEEeCCCCCCCCcc
Q 013934          124 VWQTNTAN------KGVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTDTLLAGQS----LRVGGVTKLVSRLSAEENVDGP  193 (433)
Q Consensus       124 vWst~~~~------~~~~~~~L~d~GNLVl~~~~~~~lWqSFD~PTDTLLpGq~----L~~~g~~~L~S~~S~~dps~G~  193 (433)
                      ||+|+++.      ..++.|+|+|+|||||+|  +.+||||  ||||||||||+    |..|  ++|   ++.+||++|.
T Consensus        95 vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g--~~L---~S~~dps~G~  165 (276)
T 3m7h_A           95 VWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPG--SEL---VQGVVYGAGA  165 (276)
T ss_dssp             EEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSS--EEE---CTTCEEEETT
T ss_pred             EEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccC--ccc---ccCCCCCCce
Confidence            99999865      345789999999999998  8899999  99999999999    5543  567   5678999999


Q ss_pred             cEEEecCCCcceeeecCCCCCCeeEEecCCCCCCccCCcceEEEecccCCCcceeEEEEEecCCCceEEEcccCCCeEEE
Q 013934          194 YSFVMEPKRAAMYYKSSNSPEPVLYFTSYDWFNARDVSLQNVTFNSRPETDEAVAFVQTLDSSANGNILARPKYDSTISF  273 (433)
Q Consensus       194 ysl~~~~~gl~l~~~~~~~~~~~~Yw~s~~w~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  273 (433)
                      |+|+|+++|...++..  ..  .+||++++|...   . ..+.+....      .  +.+....+..+.+........+|
T Consensus       166 fsl~l~~dGnlvLy~~--~~--~~yW~Sgt~~~~---~-~~l~l~~dG------n--Lvl~d~~~~~vWsS~t~~~~~~r  229 (276)
T 3m7h_A          166 SKLVFQGDGNLVAYGP--NG--AATWNAGTQGKG---A-VRAVFQGDG------N--LVVYGAGNAVLWHSHTGGHASAV  229 (276)
T ss_dssp             EEEEECTTSCEEEECT--TS--SEEEECCCTTTT---C-CEEEECTTS------C--EEEECTTSCEEEECSCTTCTTCE
T ss_pred             EEEeecCCceEEEEeC--CC--eEEEECCCCCCc---c-EEEEEcCCC------e--EEEEeCCCcEEEEecCCCCCCEE
Confidence            9999998883222321  22  689999987541   1 234443221      1  22222223233332222222369


Q ss_pred             EEEccCCcEEEEEe
Q 013934          274 LRLGIDGNLKIYTY  287 (433)
Q Consensus       274 l~Ld~dG~lr~y~w  287 (433)
                      ++|+.||+||+|.|
T Consensus       230 l~Ld~dGnLvly~~  243 (276)
T 3m7h_A          230 LRLQANGSIAILDE  243 (276)
T ss_dssp             EEECTTSCEEEEEE
T ss_pred             EEEcCCccEEEEcC
Confidence            99999999999987
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii} Back     alignment and structure
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii} Back     alignment and structure
>3sp8_A Hepatocyte growth factor alpha chain; kringle domain, Met tyrosine kinase, hormone; HET: MES; 1.86A {Homo sapiens} PDB: 3hn4_A* Back     alignment and structure
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 433
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 3e-16
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 3e-14
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 6e-07
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 7e-12
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 0.003
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 1e-11
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 2e-05
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 1e-09
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 1e-07
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 3e-07
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 1e-05
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 72.3 bits (177), Expect = 3e-16
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 78  RLGLQRNEPLFLW-----VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNT-AN 131
              +Q +  L L+     VW +N G   ++     L +DGN V+ +A+G  +W +++   
Sbjct: 22  HFIMQEDCNLVLYDHSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRG 81

Query: 132 KGVVGFKLLSNGNMVLYDSKGKFIWQSFDY 161
            G     L  +GN+V+Y S    IW +  Y
Sbjct: 82  NGNYVLVLQEDGNVVIYGSD---IWSTGTY 108
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.73
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.72
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.68
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.65
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.61
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.47
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.18
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.11
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.11
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.1
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 98.91
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.9
d2qj2a191 Hepatocyte growth factor {Human (Homo sapiens) [Ta 90.44
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.73  E-value=1.2e-17  Score=139.02  Aligned_cols=99  Identities=21%  Similarity=0.373  Sum_probs=78.2

Q ss_pred             ceEEEeCCCcEEEEEEeCCCCCeEEEEEEceecCCCceeEEEEeccCCccccCcEEEEcCCCcEEEEecCCcEEEEeccC
Q 013934           51 YRMLSIFNSPFQLAFYNTTPNAYTLALRLGLQRNEPLFLWVWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA  130 (433)
Q Consensus        51 ~~~l~s~~g~F~lGF~~~~~~~~~l~Iw~~~~~~~~~~tvVW~ANr~~Pv~~~~~l~l~~~GnLvL~~~~g~~vWst~~~  130 (433)
                      ++.|+  +|.|+|.|+.  +++.  .|+..       .++||.||++.|.. +++|.|+.||+|||+|. +.++|++++.
T Consensus        13 g~~l~--~g~~~l~~q~--DGNL--vly~~-------~~~vW~s~~~~~~~-~~~l~l~~dGnLvl~~~-~~~~w~s~t~   77 (112)
T d1xd5a_          13 GGSLA--EGGYLFIIQN--DCNL--VLYDN-------NRAVWASGTNGKAS-GCVLKMQNDGNLVIYSG-SRAIWASNTN   77 (112)
T ss_dssp             TCEEE--ETTEEEEECT--TSCE--EEEET-------TEEEEECCCTTSCS-SEEEEECTTSCEEEEET-TEEEEECCCC
T ss_pred             CCEEE--ECCEEEEEcC--CCCE--EEEcC-------CcEEEEccCccCCC-CcEEEEeccccEEEEec-CCeEEEEeec
Confidence            44554  4889999985  4443  44432       26899999998743 46899999999999997 5678877765


Q ss_pred             CC-ceeEEEEeeCCCeeEeecCceEEEcccCCCCc
Q 013934          131 NK-GVVGFKLLSNGNMVLYDSKGKFIWQSFDYPTD  164 (433)
Q Consensus       131 ~~-~~~~~~L~d~GNLVl~~~~~~~lWqSFD~PTD  164 (433)
                      .. +...|+|+|+|||||++.+++++|||+.+|++
T Consensus        78 ~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          78 RQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             CSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             cCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence            43 45679999999999999999999999999975
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure