Citrus Sinensis ID: 013940

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
MDGVKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
cccccccHHHHHHHHHHHHccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHcccEEEEEccEEEcccccHHHHHHcccccccccccccccccccccHHcccccccccccccccccccccccccEEEEEEcccccEEEEEEEEccccccccccccccccHHHHHHHHHHHccccccEEEEEEcEEEEEccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccEEEEEcccccccccccccccccHHHHHHccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccccHHHHHHHHccccEEEEEccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHccccccEEEEEEEcccccEEEEEEEcccccccccccccccccHHHHHHHHHHHccccccEEEEEEcEEEcccccccccccccHHHHcccHHHHHHHHHHHHHcccccEEEEEccccHHHHEcccccccccEEEEEcccccccccccccccHHHHHHHHHccccccccEccccccccccEEccccEEEEEEEcccccEEEEEEEEEccccEEEEEEEEHHHccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
MDGVKRWRWWAVFILGALIgsqfacgggndstkANHEALVSRIAfgscanqtapqpiWDAIikfdpqvfiwmgdniygdikrpskmfgkertigpwknvprfvptsqdemnfkyhiiknhpaysrlrhnlntkagiytsytfgpvgrQIKIILLdtryhrdplssdgtilgstQWTWLekelngpssAITIIVSSIQVISNlsattgplfymeswgrfpkERDRLFQLIADSkrngvffisgdvhfgeitrydcdvgyalyditssgltqavekavpapfHFVVRFLAwwtpstmrvigkncrhrsctygqpnfgaieidwdatpvALKIEvrdtdgipaigvNISLSELQAQSvnsaatlrvgehqkhcslevdlpwiVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
MDGVKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFgkertigpwknvprfvpTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIytsytfgpvGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
MDGVKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPssaitiivssiqvisNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
***VKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKC***
*DGVKRWRWWAVFILGALIGSQFA***************VSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNIS*****************GEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKC***
MDGVKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
*DGVKRWRWWAVFILGALIGSQFACG**********EALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDGVKRWRWWAVFILGALIGSQFACGGGNDSTKANHEALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSVNSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGLNFAAAVVFRLFLRKCKLD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query433 2.2.26 [Sep-21-2011]
P42251583 Alkaline phosphatase D OS yes no 0.247 0.183 0.272 9e-07
>sp|P42251|PPBD_BACSU Alkaline phosphatase D OS=Bacillus subtilis (strain 168) GN=phoD PE=1 SV=3 Back     alignment and function desciption
 Score = 55.1 bits (131), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 136 IYTSYTFGPVGRQIKIILLDTRYHRD-PLSSDG-------------TILGSTQWTWLEKE 181
           +Y  +T+G +       +LDTR +RD   ++DG             T+LG  Q  WL   
Sbjct: 317 LYRHFTYGNLA---SFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNN 373

Query: 182 LNGPSSAITIIVSSIQVIS-NLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFI 240
           L   ++   ++   I     N   +  P++ M+SW  +P +R+R+   I     N V  +
Sbjct: 374 LGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVL 433

Query: 241 SGDVH 245
           +GDVH
Sbjct: 434 TGDVH 438

Bacillus subtilis (strain 168) (taxid: 224308)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
224086142428 predicted protein [Populus trichocarpa] 0.879 0.890 0.630 1e-159
359491937529 PREDICTED: uncharacterized protein LOC10 0.877 0.718 0.630 1e-156
297745632456 unnamed protein product [Vitis vinifera] 0.884 0.839 0.626 1e-156
255539384438 conserved hypothetical protein [Ricinus 0.896 0.885 0.612 1e-155
449455663465 PREDICTED: uncharacterized protein LOC10 0.969 0.903 0.564 1e-147
15238950447 calcineurin-like metallo-phosphoesterase 0.893 0.865 0.566 1e-143
297791819460 predicted protein [Arabidopsis lyrata su 0.896 0.843 0.560 1e-143
13430796447 unknown protein [Arabidopsis thaliana] 0.893 0.865 0.564 1e-142
357493271442 hypothetical protein MTR_5g085780 [Medic 0.903 0.884 0.572 1e-141
356499243477 PREDICTED: uncharacterized protein LOC10 0.870 0.790 0.586 1e-141
>gi|224086142|ref|XP_002307831.1| predicted protein [Populus trichocarpa] gi|222857280|gb|EEE94827.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/438 (63%), Positives = 323/438 (73%), Gaps = 57/438 (13%)

Query: 38  ALVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWK 97
            +V+RIAFGSCANQ+APQPIW+AII FDPQVFIW+GDN+YGD KRP K+FGKERTIGPWK
Sbjct: 6   GVVTRIAFGSCANQSAPQPIWNAIIDFDPQVFIWLGDNVYGDTKRPFKLFGKERTIGPWK 65

Query: 98  NVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHN-------------LN------------- 131
           N PRF+P+S  E+  +Y   K++P YSRLRH              LN             
Sbjct: 66  NAPRFIPSSPKELESRYQKAKSNPGYSRLRHTTQVIGTWDDHDYGLNDAGKEFGGKITNQ 125

Query: 132 ----------------TKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQW 175
                            + G+YTSY FGPVGRQIK+ILLDTRYHRDPL SDG++LGS+QW
Sbjct: 126 KLLLDFLDEPQDSPRRNQEGVYTSYMFGPVGRQIKVILLDTRYHRDPLRSDGSVLGSSQW 185

Query: 176 TWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRN 235
           TWLEKELNGP SAITII SS+QVISNLSATT PLF +ESWGRFPKERDRLF+LIAD+KR 
Sbjct: 186 TWLEKELNGPKSAITIIGSSVQVISNLSATTRPLFSLESWGRFPKERDRLFKLIADTKRE 245

Query: 236 GVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTM 295
           GVFFISGDVHFGEI+RYDC  GY LYD+T+SGLTQAVEKAVP  F  +VRF+AW TP+TM
Sbjct: 246 GVFFISGDVHFGEISRYDCATGYPLYDVTASGLTQAVEKAVPHVFSLIVRFVAWLTPTTM 305

Query: 296 RVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISLSELQAQSV 355
           RVI  NCR +SCTYGQPNFGAIEIDW  TPV LK+EVRD  G P  GV   L ELQ++  
Sbjct: 306 RVISTNCRFKSCTYGQPNFGAIEIDWSTTPVTLKLEVRDIVGYPVTGVKFPLVELQSR-- 363

Query: 356 NSAATLRVGEHQKHCSLEVDLPWIVRYRLTILFYFSVAGMFFSTLGSIFLKFLLFALVGL 415
            S  +++ GEH++HCSLEV+LPW+++YRL ILFY SV+              LL A++GL
Sbjct: 364 GSVPSVKAGEHRRHCSLEVNLPWMIKYRLAILFYCSVSA-------------LLLAMIGL 410

Query: 416 NFAAAVVFRLFLRKCKLD 433
            +AA + FRLFL KCKLD
Sbjct: 411 AYAATLAFRLFLHKCKLD 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359491937|ref|XP_002274058.2| PREDICTED: uncharacterized protein LOC100249580 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745632|emb|CBI40797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255539384|ref|XP_002510757.1| conserved hypothetical protein [Ricinus communis] gi|223551458|gb|EEF52944.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|449455663|ref|XP_004145571.1| PREDICTED: uncharacterized protein LOC101210375 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15238950|ref|NP_199052.1| calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] gi|9759473|dbj|BAB10478.1| unnamed protein product [Arabidopsis thaliana] gi|23296303|gb|AAN13036.1| unknown protein [Arabidopsis thaliana] gi|332007418|gb|AED94801.1| calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297791819|ref|XP_002863794.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297309629|gb|EFH40053.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|13430796|gb|AAK26020.1|AF360310_1 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357493271|ref|XP_003616924.1| hypothetical protein MTR_5g085780 [Medicago truncatula] gi|355518259|gb|AES99882.1| hypothetical protein MTR_5g085780 [Medicago truncatula] gi|388500888|gb|AFK38510.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356499243|ref|XP_003518451.1| PREDICTED: uncharacterized protein LOC100801460 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
UNIPROTKB|Q47VV1369 CPS_4422 "Alkaline phosphatase 0.337 0.395 0.340 1.8e-27
TIGR_CMR|CPS_4422369 CPS_4422 "alkaline phosphatase 0.337 0.395 0.340 1.8e-27
UNIPROTKB|Q0C5F5408 HNE_0308 "Alkaline phosphatase 0.293 0.311 0.335 6e-22
UNIPROTKB|Q47VV1 CPS_4422 "Alkaline phosphatase D domain protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
 Score = 232 (86.7 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
 Identities = 61/179 (34%), Positives = 89/179 (49%)

Query:   133 KAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSS------------------------DGT 168
             K GIYT+Y +G    ++ +IL D R++RD LSS                        + +
Sbjct:   153 KNGIYTAYMYGEEHNKVHVILPDLRWNRDKLSSVDRLNYQTKRKPKNMGPYSPSSLKNAS 212

Query:   169 ILGSTQWTWLEKELNGPXXXXXXXXXXXXXXXNLSATTGPLFYMESWGRFPKERDRLFQL 228
             ++G TQW WLEKEL  P                L   TG     ESW  FP +R+RLF L
Sbjct:   213 MIGETQWQWLEKELQKPSKIKVIASSLQL----LPEFTG----WESWANFPHDRERLFAL 264

Query:   229 IADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFL 287
             I   + NG+  ISGD H+GE+++    + Y L+++TSSGLT+  ++  P   H +  F+
Sbjct:   265 IKKHQVNGIIIISGDTHWGEMSKVSDKLDYPLWEVTSSGLTEEWKEVSPNK-HRIGNFI 322
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
TIGR_CMR|CPS_4422 CPS_4422 "alkaline phosphatase D domain protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C5F5 HNE_0308 "Alkaline phosphatase homolog" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.4.4LOW CONFIDENCE prediction!
3rd Layer3.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
cd07389228 cd07389, MPP_PhoD, Bacillus subtilis PhoD and rela 3e-29
COG3540522 COG3540, PhoD, Phosphodiesterase/alkaline phosphat 3e-14
pfam09423452 pfam09423, PhoD, PhoD-like phosphatase 4e-14
>gnl|CDD|163632 cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain Back     alignment and domain information 
 Score =  113 bits (285), Expect = 3e-29
 Identities = 62/286 (21%), Positives = 82/286 (28%), Gaps = 117/286 (40%)

Query: 42  RIAFGSCANQTAPQPIWDAII-----KFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGP- 95
           R AFGSC    +        +     + DP +F+ +GD IY D          E      
Sbjct: 1   RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEP 60

Query: 96  --------------------------------------------WKNVPRFVPTSQDEMN 111
                                                       W     +V  S     
Sbjct: 61  AHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYA 120

Query: 112 FKYHIIK------NHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSS 165
            K    +           S  R     + GIY S+ FG +   + +ILLDTR +RD    
Sbjct: 121 RKAAARQAYLEFQPVRNPSPRRGG---RGGIYRSFRFGDL---VDLILLDTRTYRD---- 170

Query: 166 DGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRL 225
                                                           SW  +P ER+RL
Sbjct: 171 ------------------------------------------------SWDGYPAERERL 182

Query: 226 FQLIADSKRNGVFFISGDVHFGEITRYDCDV---GYALYDITSSGL 268
             L+A  K   V F+SGDVH  E +    D    GY L + TSSGL
Sbjct: 183 LDLLAKRKIKNVVFLSGDVHLAEASDLPLDAPGDGYVLVEFTSSGL 228

PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 228
>gnl|CDD|226070 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|220234 pfam09423, PhoD, PhoD-like phosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 433
COG3540522 PhoD Phosphodiesterase/alkaline phosphatase D [Ino 100.0
PF09423453 PhoD: PhoD-like phosphatase; InterPro: IPR018946 T 100.0
cd07389228 MPP_PhoD Bacillus subtilis PhoD and related protei 99.97
KOG2679336 consensus Purple (tartrate-resistant) acid phospha 99.81
PTZ00422394 glideosome-associated protein 50; Provisional 99.81
cd07378277 MPP_ACP5 Homo sapiens acid phosphatase 5 and relat 99.79
cd00839294 MPP_PAPs purple acid phosphatases of the metalloph 99.78
PLN02533427 probable purple acid phosphatase 99.69
cd07395262 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, 99.49
KOG1378452 consensus Purple acid phosphatase [Carbohydrate tr 99.38
cd07402240 MPP_GpdQ Enterobacter aerogenes GpdQ and related p 99.28
cd07396267 MPP_Nbla03831 Homo sapiens Nbla03831 and related p 99.24
TIGR03767496 P_acnes_RR metallophosphoesterase, PPA1498 family. 99.13
PRK11148275 cyclic 3',5'-adenosine monophosphate phosphodieste 99.1
cd00842296 MPP_ASMase acid sphingomyelinase and related prote 99.09
cd07401256 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal 98.9
cd07399214 MPP_YvnB Bacillus subtilis YvnB and related protei 98.85
TIGR03768492 RPA4764 metallophosphoesterase, RPA4764 family. Th 98.77
cd08163257 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related 98.71
cd07392188 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel 97.89
PF00149200 Metallophos: Calcineurin-like phosphoesterase; Int 97.81
cd07383199 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase 97.8
cd07393232 MPP_DR1119 Deinococcus radiodurans DR1119 and rela 97.5
COG1409301 Icc Predicted phosphohydrolases [General function 97.12
cd07400144 MPP_YydB Bacillus subtilis YydB and related protei 96.25
TIGR03729239 acc_ester putative phosphoesterase. Members of thi 96.08
cd07385223 MPP_YkuE_C Bacillus subtilis YkuE and related prot 96.01
cd07404166 MPP_MS158 Microscilla MS158 and related proteins, 95.61
KOG1432379 consensus Predicted DNA repair exonuclease SIA1 [G 95.56
PRK11340271 phosphodiesterase YaeI; Provisional 95.52
cd00840223 MPP_Mre11_N Mre11 nuclease, N-terminal metallophos 95.46
cd07388224 MPP_Tt1561 Thermus thermophilus Tt1561 and related 94.61
cd08166195 MPP_Cdc1_like_1 uncharacterized subgroup related t 92.67
KOG3770577 consensus Acid sphingomyelinase and PHM5 phosphate 92.3
cd07379135 MPP_239FB Homo sapiens 239FB and related proteins, 91.64
cd00838131 MPP_superfamily metallophosphatase superfamily, me 89.95
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-47  Score=388.18  Aligned_cols=303  Identities=23%  Similarity=0.370  Sum_probs=226.9

Q ss_pred             CCCCCCCCCCC--CcccEEEEEeeCCCC-CChhHHHHHhhcCCcEEEEeccccccCCCCCccccCcccccCCCCC-----
Q 013940           27 GGNDSTKANHE--ALVSRIAFGSCANQT-APQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKN-----   98 (433)
Q Consensus        27 ~~~t~T~p~~~--~~~~riAfgSC~~~~-~~~~i~~~Ia~~~pD~~i~lGD~IY~D~~~~~~~~g~~r~~~~w~~-----   98 (433)
                      -|||||+|+..  .+.+++|+.||++|. +++.+|++|++++||||||+||+||||+..+..+-     ...|++     
T Consensus       127 vGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~-----~~~~~~~~~~~  201 (522)
T COG3540         127 VGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVS-----LNSWKNVVVTQ  201 (522)
T ss_pred             ccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccc-----cccccccccCC
Confidence            39999999985  468999999999986 89999999999999999999999999998764220     113443     


Q ss_pred             CCCCCCCCHHHHHHHHHHhcCChhHHHHHhhh------------c-----------------------------------
Q 013940           99 VPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNL------------N-----------------------------------  131 (433)
Q Consensus        99 ~p~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~------------N-----------------------------------  131 (433)
                      ++.++.++++|||.+|++|++|++||++|+.+            |                                   
T Consensus       202 ~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPi  281 (522)
T COG3540         202 HKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPI  281 (522)
T ss_pred             CCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCcc
Confidence            45678999999999999999999999999876            2                                   


Q ss_pred             ------CCCccEEEEEeCCCCCeeEEEEEeCCCCC------CCC--------CCCCCCCcHHHHHHHHHHhcCCCCCeEE
Q 013940          132 ------TKAGIYTSYTFGPVGRQIKIILLDTRYHR------DPL--------SSDGTILGSTQWTWLEKELNGPSSAITI  191 (433)
Q Consensus       132 ------~~~giY~sf~~G~~g~~v~~~~LDtR~~R------~~~--------~~~~~mLG~~Q~~WL~~~L~~s~a~wkI  191 (433)
                            ....+||+|.||++   ++|+|||||+||      ++.        ++..+|||++|.+||+++|.+|+++|||
T Consensus       282 R~~~~p~~~~lYR~~tyG~L---a~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~SkatWnV  358 (522)
T COG3540         282 RYSSLPTDGRLYRSFTYGPL---ADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGASKATWNV  358 (522)
T ss_pred             ccccCCccceeeeeeccccc---cceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhcchhhhh
Confidence                  12589999999997   999999999999      433        2457999999999999999999999999


Q ss_pred             EEecceeecC----CcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccceeEeeccC-----CCcceEE
Q 013940          192 IVSSIQVISN----LSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCD-----VGYALYD  262 (433)
Q Consensus       192 v~s~vpv~~~----~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~-----~~~~l~e  262 (433)
                      |++++|+-.-    ..+..+...+.|+|+||+.+|+||+.+|++.+++|+|+|+||+|+.++..+..+     ...+.+|
T Consensus       359 ia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~E  438 (522)
T COG3540         359 IAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWE  438 (522)
T ss_pred             hhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceee
Confidence            9999997431    111235567899999999999999999999999999999999999999887643     2347899


Q ss_pred             EecCCCcccccccCCCCchhhHhhhhccCCCceeecccc-ccccccC-CCCCCEEEEEEecCCCceEEEEEEEcCCCCeE
Q 013940          263 ITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKN-CRHRSCT-YGQPNFGAIEIDWDATPVALKIEVRDTDGIPA  340 (433)
Q Consensus       263 iTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~-~~~~~~~-~~~~nFg~ieid~~~~~~~l~~~i~d~~G~~l  340 (433)
                      |+|.+++....  .|.... ...++. ..|. +++.+.. ..+..+. .+..-|+.++|...-.  ++++++.+..|.++
T Consensus       439 fv~tsi~sG~~--gp~~~~-~~~~l~-~np~-vkF~~a~~~g~~~~~~~~~q~~~~~~v~~~i~--~~t~~l~~~a~~iv  511 (522)
T COG3540         439 FVSTSINSGGF--GPNDLP-DMAILT-FNPE-VKFNNAPGRGYVLCPVAGLQFFGEVMVVSAIR--DMTVRLSDRAGFIV  511 (522)
T ss_pred             EeeccCcCCCc--CCCcCc-hhhhhc-cCce-EEeecccccccccCCcccceeEEEEEehhhhh--ccccchhhccccee
Confidence            99999987532  121110 011100 0111 1111111 1121222 2334456666665422  46777788888877


Q ss_pred             EEEE
Q 013940          341 IGVN  344 (433)
Q Consensus       341 ~~~t  344 (433)
                      +..+
T Consensus       512 ~~~~  515 (522)
T COG3540         512 LPGK  515 (522)
T ss_pred             eccC
Confidence            7654

>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B Back     alignment and domain information
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00422 glideosome-associated protein 50; Provisional Back     alignment and domain information
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>PLN02533 probable purple acid phosphatase Back     alignment and domain information
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family Back     alignment and domain information
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional Back     alignment and domain information
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family Back     alignment and domain information
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain Back     alignment and domain information
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 Back     alignment and domain information
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG1409 Icc Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR03729 acc_ester putative phosphoesterase Back     alignment and domain information
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] Back     alignment and domain information
>PRK11340 phosphodiesterase YaeI; Provisional Back     alignment and domain information
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain Back     alignment and domain information
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] Back     alignment and domain information
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
2yeq_A527 Structure Of Phod Length = 527 9e-06
>pdb|2YEQ|A Chain A, Structure Of Phod Length = 527 Back     alignment and structure 
Iteration: 1

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 18/125 (14%)
Query: 136 IYTSYTFGPVGRQIKIILLDTRYHRD-PLSSDG-------------TILGSTQWTWLEKE 181
           +Y  +T+G +       +LDTR +RD   ++DG             T+LG  Q  WL   
Sbjct: 261 LYRHFTYGNLA---SFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNN 317
Query: 182 LNGPXXXXXXXXXXXXXXX-NLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFI 240
           L                   N   +  P++ M+SW  +P +R+R+   I     N V  +
Sbjct: 318 LGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVL 377
Query: 241 SGDVH 245
           +GDVH
Sbjct: 378 TGDVH 382

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
2yeq_A527 Apased, PHOD, alkaline phosphatase D; hydrolase, p 9e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
2xmo_A443 LMO2642 protein; phosphodiesterase, hydrolase; 1.7 6e-04
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} Length = 527 Back     alignment and structure
 Score = 81.4 bits (200), Expect = 9e-17
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 15/175 (8%)

Query: 96  WKNVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLD 155
              +P    + +  +  +    + +  +  LR +          Y     G      +LD
Sbjct: 218 ANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLD 277

Query: 156 TRYHRDP--------------LSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVIS- 200
           TR +RD                + + T+LG  Q  WL   L   ++   ++   I     
Sbjct: 278 TRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKW 337

Query: 201 NLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCD 255
           N   +  P++ M+SW  +P +R+R+   I     N V  ++GDVH    +    D
Sbjct: 338 NFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVD 392
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
2yeq_A527 Apased, PHOD, alkaline phosphatase D; hydrolase, p 100.0
1xzw_A426 Purple acid phosphatase; hydrolase; HET: NAG FUC M 99.83
2qfp_A424 Purple acid phosphatase; binuclear, Fe-Zn, hydrola 99.82
1ute_A313 Protein (II purple acid phosphatase); tartrate res 99.79
3tgh_A342 Glideosome-associated protein 50; phosphatase fold 99.78
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fo 99.32
2nxf_A322 Putative dimetal phosphatase; dinuclear metal cent 99.26
2xmo_A443 LMO2642 protein; phosphodiesterase, hydrolase; 1.7 99.18
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metall 99.12
2q8u_A336 Exonuclease, putative; structural genomics, joint 96.6
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 96.09
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 95.77
3tho_B379 Exonuclease, putative; adenosine triphosphate, bac 93.79
3ck2_A176 Conserved uncharacterized protein (predicted phosp 91.32
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phos 88.05
2a22_A215 Vacuolar protein sorting 29; alpha-beta-BETA-alpha 85.26
1nnw_A252 Hypothetical protein; structural genomics, PSI, pr 83.41
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=1.1e-42  Score=369.41  Aligned_cols=296  Identities=17%  Similarity=0.241  Sum_probs=224.5

Q ss_pred             cCCCCCCCCCCC--CcccEEEEEeeCCCC-CChhHHHHHhhcCCcEEEEeccccccCCCCCccc-cCcccccCCCCCCCC
Q 013940           26 GGGNDSTKANHE--ALVSRIAFGSCANQT-APQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKM-FGKERTIGPWKNVPR  101 (433)
Q Consensus        26 ~~~~t~T~p~~~--~~~~riAfgSC~~~~-~~~~i~~~Ia~~~pD~~i~lGD~IY~D~~~~~~~-~g~~r~~~~w~~~p~  101 (433)
                      ..|++||+|+.+  ...+||||+||+++. +++++|++|++.+|||+||+||+||+|+...... .+..      ++.+.
T Consensus       100 ~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~------R~~~~  173 (527)
T 2yeq_A          100 PVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNV------RTHNS  173 (527)
T ss_dssp             CCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCC------SCCSS
T ss_pred             CCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCccccccccc------ccCCc
Confidence            458999999864  358999999999985 8899999999999999999999999998653211 0111      22344


Q ss_pred             CCCCCHHHHHHHHHHhcCChhHHHHHhhh-------------c--C----------------------------------
Q 013940          102 FVPTSQDEMNFKYHIIKNHPAYSRLRHNL-------------N--T----------------------------------  132 (433)
Q Consensus       102 ~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~-------------N--~----------------------------------  132 (433)
                      .+..++++||.+|+++++||++|++++++             |  .                                  
T Consensus       174 ~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~  253 (527)
T 2yeq_A          174 AEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSL  253 (527)
T ss_dssp             SSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGC
T ss_pred             ccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccC
Confidence            56789999999999999999999998866             1  0                                  


Q ss_pred             ----CCccEEEEEeCCCCCeeEEEEEeCCCCCCCC--------------CCCCCCCcHHHHHHHHHHhcCCCCCeEEEEe
Q 013940          133 ----KAGIYTSYTFGPVGRQIKIILLDTRYHRDPL--------------SSDGTILGSTQWTWLEKELNGPSSAITIIVS  194 (433)
Q Consensus       133 ----~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~--------------~~~~~mLG~~Q~~WL~~~L~~s~a~wkIv~s  194 (433)
                          ..++||+|++|++   ++|||||||+||+++              .+.++|||++|++||+++|++|+++||||++
T Consensus       254 p~~~~~~~y~sf~~G~l---v~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s  330 (527)
T 2yeq_A          254 PNGPDMQLYRHFTYGNL---ASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQ  330 (527)
T ss_dssp             CBTTBCCCCEEEEETTT---EEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHCCSSEEEEEC
T ss_pred             CCCCCceEEEEEEcCCc---ceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcCCCCeEEEEe
Confidence                1257999999985   999999999999875              3467999999999999999999999999999


Q ss_pred             cceeecCCcC-CCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccceeEeeccC-----CCcceEEEecCCC
Q 013940          195 SIQVISNLSA-TTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCD-----VGYALYDITSSGL  268 (433)
Q Consensus       195 ~vpv~~~~~~-~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~-----~~~~l~eiTSSgl  268 (433)
                      |+||.+.... +.+...+.|+|++|+.+|++|+++|++++++|+|+||||+|.+++.++...     .....+|+++|++
T Consensus       331 ~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi  410 (527)
T 2yeq_A          331 QIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSI  410 (527)
T ss_dssp             SSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCS
T ss_pred             CCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCe
Confidence            9999764211 111223679999999999999999999999999999999999999887532     1234899999999


Q ss_pred             ccccccc-CCCCchhhHhhhhccCCCceeeccccccccccCCCCCCEEEEEEecCCCceEEEEEEEc------CCCCeEE
Q 013940          269 TQAVEKA-VPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRD------TDGIPAI  341 (433)
Q Consensus       269 t~~~~~~-~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~d------~~G~~l~  341 (433)
                      ++..... .+....            .+...+|+.++.   ...+||+.|+|+.+    +++++++.      .++.+..
T Consensus       411 ~s~~~g~~~~~~~~------------~~~~~np~~~~~---~~~~Gy~~v~vt~~----~~~~~~~~v~~v~~~~~~~~~  471 (527)
T 2yeq_A          411 TSGGNGADKRADTD------------QILKENPHIQFF---NDYRGYVRCTVTPH----QWKADYRVMPFVTEPGAAIST  471 (527)
T ss_dssp             STTCSCBSBCTTHH------------HHHHHCTTEEEE---EBCEEEEEEEEETT----EEEEEEEEESCSSSSCCCCEE
T ss_pred             eCCCCcccchhhhh------------hhhhcCCcceee---eCCCCEEEEEEecc----EEEEEEEEeCCccCCCCccee
Confidence            8753211 110000            011134554542   25889999999987    56666543      3455555


Q ss_pred             EEEeecCC
Q 013940          342 GVNISLSE  349 (433)
Q Consensus       342 ~~ti~~~~  349 (433)
                      ..++....
T Consensus       472 ~~~~~~~~  479 (527)
T 2yeq_A          472 RASFVYQK  479 (527)
T ss_dssp             EEEEEECS
T ss_pred             eeEEEEeC
Confidence            66665544
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Back     alignment and structure
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Back     alignment and structure
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Back     alignment and structure
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Back     alignment and structure
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Back     alignment and structure
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A Back     alignment and structure
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 433
d1utea_302 d.159.1.1 (A:) Mammalian purple acid phosphatase { 1e-04
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Mammalian purple acid phosphatase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 41.7 bits (96), Expect = 1e-04
 Identities = 44/298 (14%), Positives = 86/298 (28%), Gaps = 57/298 (19%)

Query: 57  IWDAIIKFDPQVFIWMGDNIYGD------IKRPSKMFGKERTIGPWKNVPRFVPTSQDEM 110
           I   +        + +GDN Y         KR  + F    +    +NVP  V     + 
Sbjct: 33  IATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDH 92

Query: 111 NFKYHIIKNHPAYSRLRHNLNTKAGIYT-SYTFGPVGRQIKIILLDTR---------YHR 160
                      AYS++    N  +  Y   +        + I +LDT            +
Sbjct: 93  LGNVS---AQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 149

Query: 161 DPLSSDGTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPK 220
            P       L  TQ  W++K+L        ++                 + + S      
Sbjct: 150 QPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGH--------------YPVWSIAEHGP 195

Query: 221 ERDRLFQLIADSKRNGV-FFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAP 279
               + QL+     + V  ++ G  H  +  + +  +G+ L     SG    ++ +    
Sbjct: 196 THCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVL-----SGAGNFMDPSKKHL 250

Query: 280 FHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDG 337
                 +L +   +   + G              F  +EI        + +   +  G
Sbjct: 251 RKVPNGYLRFHFGAENSLGG--------------FAYVEITPK----EMSVTYIEASG 290

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
d1utea_302 Mammalian purple acid phosphatase {Pig (Sus scrofa 99.87
d2qfra2312 Plant purple acid phosphatase, catalytic domain {K 99.76
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycoba 99.2
d2nxfa1320 Uncharacterized C17orf48 homolog zgc:64213 {Zebraf 99.16
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aeroge 98.81
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus 97.68
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus 97.53
d1z2wa1182 Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus 90.5
d2a22a1193 Vacuolar protein sorting 29, VPS29 {Cryptosporidiu 87.82
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneu 87.76
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneu 82.31
d1s3la_165 Putative phosphodiesterase MJ0936 {Methanococcus j 80.53
d1su1a_184 Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 80.24
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Mammalian purple acid phosphatase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.87  E-value=5.8e-21  Score=181.55  Aligned_cols=266  Identities=16%  Similarity=0.154  Sum_probs=163.8

Q ss_pred             cccEEEEEeeCCCC--CC----------hhHHHHHhhcCCcEEEEeccccccCCCCCcccc--C--cccccC-C-CCCCC
Q 013940           39 LVSRIAFGSCANQT--AP----------QPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKMF--G--KERTIG-P-WKNVP  100 (433)
Q Consensus        39 ~~~riAfgSC~~~~--~~----------~~i~~~Ia~~~pD~~i~lGD~IY~D~~~~~~~~--g--~~r~~~-~-w~~~p  100 (433)
                      +.+||++++-....  ..          ..+.+.+++.+|||+|++||+||.++.......  .  .+.... . -...|
T Consensus         3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P   82 (302)
T d1utea_           3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP   82 (302)
T ss_dssp             CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred             CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence            47999998864421  11          123444556899999999999998875421100  0  000000 0 01334


Q ss_pred             CCCCCCHHHHHHHHHHhcCChhHHHHHhhhc---CCCccEEEEEeCC--CCCeeEEEEEeCCCCCCC---------CCCC
Q 013940          101 RFVPTSQDEMNFKYHIIKNHPAYSRLRHNLN---TKAGIYTSYTFGP--VGRQIKIILLDTRYHRDP---------LSSD  166 (433)
Q Consensus       101 ~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N---~~~giY~sf~~G~--~g~~v~~~~LDtR~~R~~---------~~~~  166 (433)
                      .......||+....       .........+   .....|+++.++.  .+..+.|+++|+..+...         ....
T Consensus        83 ~~~~~GNHD~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~  155 (302)
T d1utea_          83 WHVLAGNHDHLGNV-------SAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPR  155 (302)
T ss_dssp             EEECCCHHHHHSCH-------HHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCS
T ss_pred             eEEeeccccccccc-------ccccchhhccccccCCCcccceeecccCCCCcEEEEEccceeEeecccccccccccccc
Confidence            45567888875321       1111111111   1223466776653  245799999999744321         1223


Q ss_pred             CCCCcHHHHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEeccccc
Q 013940          167 GTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHF  246 (433)
Q Consensus       167 ~~mLG~~Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~  246 (433)
                      ...++++|++||++.|++++++|+||+.|+|+++..           .++.....++++.++|++++++  +++|||+|.
T Consensus       156 ~~~~~~~Q~~WL~~~L~~~~~~~~iv~~h~~~~~~~-----------~~~~~~~~~~~~~~ll~~~~v~--~~~~GH~H~  222 (302)
T d1utea_         156 NLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIA-----------EHGPTHCLVKQLLPLLTTHKVT--AYLCGHDHN  222 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCS-----------SSCCCHHHHHHTHHHHHHTTCS--EEEECSSSS
T ss_pred             cchhHHHHHHHHHHHHHhhccCceEEEEeccccccC-----------CCCCchhhhhhhhHHHHhcCce--EEEeCCCcc
Confidence            445788999999999999999999999999976531           1222356788999999999987  889999999


Q ss_pred             ceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCC-CceeeccccccccccCCCCCCEEEEEEecCCCc
Q 013940          247 GEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTP-STMRVIGKNCRHRSCTYGQPNFGAIEIDWDATP  325 (433)
Q Consensus       247 ~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p-~~~r~~~~~~~~~~~~~~~~nFg~ieid~~~~~  325 (433)
                      .+....+.    .+..+|+++.+...... .. .   .     ..| ...+...      .......||+.++|+.+   
T Consensus       223 ~~r~~~~~----~~~~i~~g~g~~~~~~~-~~-~---~-----~~~~~~~~~~~------~~~~~~~gf~~~~v~~~---  279 (302)
T d1utea_         223 LQYLQDEN----GLGFVLSGAGNFMDPSK-KH-L---R-----KVPNGYLRFHF------GAENSLGGFAYVEITPK---  279 (302)
T ss_dssp             EEEEECTT----CCEEEEECBSSCCCCCC-TT-G---G-----GSCTTCEEEEE------CCTTSCCEEEEEEECSS---
T ss_pred             eEEEecCC----ccEEEEeCCCCCCCCCc-cc-c---c-----cCCCcccceee------cccCCcceEEEEEEECC---
Confidence            98765443    24556665544321111 00 0   0     011 1111110      11234568999999877   


Q ss_pred             eEEEEEEEcCCCCeEEEEEeecC
Q 013940          326 VALKIEVRDTDGIPAIGVNISLS  348 (433)
Q Consensus       326 ~~l~~~i~d~~G~~l~~~ti~~~  348 (433)
                       +|+++++|.+|+++++.+|+.+
T Consensus       280 -~l~~~~~~~~G~~~~~~~~~~~  301 (302)
T d1utea_         280 -EMSVTYIEASGKSLFKTKLPRR  301 (302)
T ss_dssp             -CEEEEEEETTSCEEEEEEECCC
T ss_pred             -EEEEEEEeCCCCEEEEEEecCC
Confidence             7899999999999999999875
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure