Citrus Sinensis ID: 013946
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 433 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C9P4 | 541 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.997 | 0.798 | 0.836 | 0.0 | |
| P52410 | 473 | 3-oxoacyl-[acyl-carrier-p | no | no | 0.974 | 0.892 | 0.570 | 1e-142 | |
| P23902 | 462 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.951 | 0.891 | 0.560 | 1e-137 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.937 | 0.980 | 0.461 | 5e-99 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.942 | 0.985 | 0.456 | 3e-98 | |
| P73283 | 416 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.951 | 0.990 | 0.452 | 2e-97 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.939 | 0.980 | 0.454 | 1e-96 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.946 | 0.992 | 0.443 | 5e-93 | |
| Q8NXE1 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.944 | 0.987 | 0.411 | 1e-87 | |
| Q6GAU2 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.944 | 0.987 | 0.411 | 1e-87 |
| >sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/433 (83%), Positives = 398/433 (91%), Gaps = 1/433 (0%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAV ++ ++E KKP +Q+RVVVTGMG+ + LGH+P FY NLL+G SGIS+IE FD
Sbjct: 110 MAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFD 168
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLLTAGKKALADGG+T++VM E DK+
Sbjct: 169 CSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKT 228
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 229 KCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 288
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILN+ANHII+GEA+VMLCGGSDA +IPIGLGGFVACRALSQRNNDPTKAS
Sbjct: 289 STACATSNFCILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKAS 348
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEPHPDG GV
Sbjct: 349 RPWDTNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGV 408
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIE+ALA +G+S+E +NYINAHATST AGDIKEYQAL HCFGQN L+VNSTKSMIGH
Sbjct: 409 ILCIERALASAGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGH 468
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEA+A VQAIRTGW+HPNINLENPD+ VDT +LVGPKKERL++KAALSNSFGF
Sbjct: 469 LLGAAGAVEAVATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGF 528
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 529 GGHNSSIIFAPYK 541
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Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2 | Back alignment and function description |
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Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/424 (57%), Positives = 316/424 (74%), Gaps = 2/424 (0%)
Query: 11 VTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAA 70
V+ K+ +KRVV+TGMGLVS G++ D +Y LL G SGIS I+ FD + FPT+
Sbjct: 50 VSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGG 109
Query: 71 EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 130
+I+ FS++G++ K +R+D + Y + AGKKAL + D +N +DK K GVL+G+G+
Sbjct: 110 QIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGM 169
Query: 131 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 189
GG+ VF + ++ L +++++PF +P+A TNMGSA+LA+DLG MGPNYSISTACATSN+
Sbjct: 170 GGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNY 229
Query: 190 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249
C AANHI RGEA++M+ GG++AA+IPIGLGGFVACRALSQRN+DP ASRPWD RDG
Sbjct: 230 CFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDG 289
Query: 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 309
FVMGEGAGVL++E LEHA KRGA I AE+ GG+ DA+HMT+P DG+GV CIE+ L
Sbjct: 290 FVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLE 349
Query: 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVE 369
+GVS E+VNYINAHATST AGD+ E A+ F G+++N+TKSMIGH LGAAG +E
Sbjct: 350 DAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLE 409
Query: 370 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
AIA V+AI TGW+HP+IN NP+ VD + + KK+ EV A+SNSFGFGGHNS + F
Sbjct: 410 AIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQH-EVDVAISNSFGFGGHNSVVAF 468
Query: 430 SPYK 433
S +K
Sbjct: 469 SAFK 472
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/416 (56%), Positives = 309/416 (74%), Gaps = 4/416 (0%)
Query: 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 80
+KRVV+TGMGL S G + D FY+ LL G SG+ I+ FD +SFPT+ A +I+ FS++G+
Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGY 106
Query: 81 VAPKLSKRMDKFMLYLLTAGKKALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ K +R+D + Y + +GKKAL G+ D +LD + GVL+G+G+GG+ VF D
Sbjct: 107 IDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGGLSVFSD 166
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
++ L Y+K++PF +P+A TNMGSA+LA+D+G+MGPNYSISTACATSN+C AANH
Sbjct: 167 GVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANH 226
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I RGEA++++ GG++AA+IPIGLGGFVACRALSQRN+DP A RPWD RDGFVMGEGAG
Sbjct: 227 IRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAG 286
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
VL++E LEHA KR A I AE+ GG+ DAYHMT+P DG+GV CI +L +GV+ E+
Sbjct: 287 VLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEE 346
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377
VNYINAHATST AGD+ E +A+ F +++NSTKSMIGH LGAAG +EAIA +++I
Sbjct: 347 VNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSI 406
Query: 378 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
TGW+HP IN NP+ VD + + KK+ EV +SNSFGFGGHNS ++F+P+K
Sbjct: 407 TTGWVHPTINQFNPEPEVDFDTVANEKKQH-EVNVGISNSFGFGGHNSVVVFAPFK 461
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 361 bits (927), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 192/416 (46%), Positives = 274/416 (65%), Gaps = 10/416 (2%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+G+GAG
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 376 AIRTGWIHPNINLENPDAVVDTNVL--VGPKKERLEVKAALSNSFGFGGHNSSIIF 429
++ + P INL+NP+ + +++ V K E +E A+ NSFGFGG N S+IF
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEY--AMCNSFGFGGTNGSLIF 411
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 265/414 (64%), Gaps = 6/414 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I +A+ M+ GG++ A P+G+GGF A RALS RN++P KASRPWD RDGFV+GEGA
Sbjct: 178 IAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAA 237
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+++EELEHAKKR A IYAE G + DAYHMT P P+ G C++ +L +G++ E
Sbjct: 238 CVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPER 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
V+YINAH TSTPA D E +A+ FG + L V+STKSM GH+LGAAGA+E + V A
Sbjct: 298 VDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLA 357
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
IR P INLENPD D + + +E +++ +SNSFGFGG N +++ S
Sbjct: 358 IRDNTAPPTINLENPDEGCDLDFVPNEARE-MKIDTVMSNSFGFGGTNGTLVLS 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/418 (45%), Positives = 262/418 (62%), Gaps = 6/418 (1%)
Query: 18 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 77
++++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 3 NLEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDA 62
Query: 78 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 137
++ K +KRMD+F + + A ++A+ D + V+NEL+ + GVLIG+G+GG+KV
Sbjct: 63 TQFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLE 119
Query: 138 DAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 196
D L + +PF +P NM S + A++LG GPN TACA + I +A
Sbjct: 120 DQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFR 179
Query: 197 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256
+ G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+
Sbjct: 180 LVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGS 239
Query: 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
G+L+LEELE A RGAKIY E G + T DAYH+T P PDG G I AL SG+ E
Sbjct: 240 GILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPE 299
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375
V+YINAH TSTPA D+ E +A+ G + + V+STKSM GHLLG +G +EA+A V
Sbjct: 300 MVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVM 359
Query: 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
AI + P INLENPD D + + G + L V ALSNSFGFGGHN ++ F Y+
Sbjct: 360 AIAEDKVPPTINLENPDPECDLDYVPG-QSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates. Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/414 (45%), Positives = 269/414 (64%), Gaps = 7/414 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTGMG++SP+G+ + + LLEG SGI IE FD T+F T+ A +K F
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCT 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+++ K +++MD F+ Y + AG +AL D G+ + E + ++ GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---ITEENAARVGVAIGSGIGGLDLIEA 117
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I G+A M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD RDGFV+G+GAG
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAG 237
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
V++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ + ++
Sbjct: 238 VMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375
V Y+NAH TSTPAGD+ E + + G+ ++ + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 VGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVL 357
Query: 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
++ + P INL++P+ +D + LV +++++ A+ NSFGFGG N S++F
Sbjct: 358 SLVDQIVPPTINLDDPEEGLDID-LVPHTARKVDMEYAICNSFGFGGTNGSLVF 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (876), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 185/417 (44%), Positives = 264/417 (63%), Gaps = 7/417 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M +KRVVVTG+G +SPLG++ D +NN + GVSGI I D +P K+AAE+K F+ +
Sbjct: 1 MTKKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K +++MD+F Y + A K A+ D + ++ +E+ + GV +GSG+GG++
Sbjct: 61 DYMDKKEARKMDRFTQYAVVAAKMAVEDADL--NITDEI-APRVGVWVGSGIGGLETLES 117
Query: 139 AIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
E L ++++PF VP +M + +++ LG G N TACAT I +A
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I RG+A+VM+ GG++A + + GF A +ALS N DP ASRP+D NRDGFVMGEGAG
Sbjct: 178 IQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAG 236
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+++LEELEHA RGAKIY E G T DAYH+T P DG G +++A+ +G++ E+
Sbjct: 237 IIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEE 296
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
++YINAH TST D E A+ FG++ L V+STKSM GHLLGAAG +EAI + A
Sbjct: 297 IDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILA 356
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
I+ G I P IN++ PD D + V + R E+ LSNS GFGGHN+++IF Y+
Sbjct: 357 IKEGVIPPTINIQTPDEECDLD-YVPDEARRQELNYVLSNSLGFGGHNATLIFKKYQ 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 260/416 (62%), Gaps = 7/416 (1%)
Query: 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 79
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 80 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 139
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 140 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 198
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 199 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGI 238
Query: 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318
L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV
Sbjct: 239 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDV 298
Query: 319 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377
Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +I
Sbjct: 299 QYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSI 358
Query: 378 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
+ + P I+ PD D ++ V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 359 KDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 260/416 (62%), Gaps = 7/416 (1%)
Query: 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 79
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 80 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 139
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 140 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 198
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 199 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGI 238
Query: 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318
L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV
Sbjct: 239 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDV 298
Query: 319 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377
Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +I
Sbjct: 299 QYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSI 358
Query: 378 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
+ + P I+ PD D ++ V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 359 KDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MSSA476) (taxid: 282459) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 433 | ||||||
| 224068526 | 493 | predicted protein [Populus trichocarpa] | 1.0 | 0.878 | 0.868 | 0.0 | |
| 225444641 | 555 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 1.0 | 0.780 | 0.866 | 0.0 | |
| 297738522 | 517 | unnamed protein product [Vitis vinifera] | 1.0 | 0.837 | 0.866 | 0.0 | |
| 255550355 | 554 | 46 kDa ketoavyl-ACP synthase [Ricinus co | 1.0 | 0.781 | 0.866 | 0.0 | |
| 294666 | 535 | chloroplast beta-ketoacyl-ACP synthase p | 1.0 | 0.809 | 0.866 | 0.0 | |
| 3800747 | 546 | 3-ketoacyl-ACP synthase [Cuphea avigera | 0.997 | 0.791 | 0.888 | 0.0 | |
| 346995771 | 573 | beta-ketoacyl-ACP synthase II [Jatropha | 1.0 | 0.755 | 0.877 | 0.0 | |
| 224141567 | 497 | predicted protein [Populus trichocarpa] | 1.0 | 0.871 | 0.875 | 0.0 | |
| 300507129 | 576 | KASII [Gossypium hirsutum] | 1.0 | 0.751 | 0.877 | 0.0 | |
| 210110425 | 548 | beta-ketoacyl-ACP synthase II-1 [Arachis | 1.0 | 0.790 | 0.872 | 0.0 |
| >gi|224068526|ref|XP_002326139.1| predicted protein [Populus trichocarpa] gi|222833332|gb|EEE71809.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/433 (86%), Positives = 409/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP +EV TKKKPH KQKRVVVTG+G+VSPLGHEPDVFYNNLLEGVSG+S+IE FD
Sbjct: 61 MAVAVQPTKEVETKKKPHTKQKRVVVTGLGVVSPLGHEPDVFYNNLLEGVSGVSQIEAFD 120
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C F T+IA EIKS STDGWV+PKL+KRMDKFMLY+L AGKKALADGGITEDVM+EL+K+
Sbjct: 121 CAQFSTRIAGEIKSISTDGWVSPKLAKRMDKFMLYMLIAGKKALADGGITEDVMDELNKA 180
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALRISYKK+NPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 181 KCGVLIGSAMGGMKVFNDAIEALRISYKKVNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 240
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACAT NFCILNAANHIIRGEA+VMLCGGSD+A+IPIGLGGFVACRALSQRN+DPTKAS
Sbjct: 241 STACATGNFCILNAANHIIRGEADVMLCGGSDSAIIPIGLGGFVACRALSQRNDDPTKAS 300
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEP PDG GV
Sbjct: 301 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGAGV 360
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGV++EDVNYINAHATSTPAGD+KEY AL+HCFG+N GLRVNSTKSMIGH
Sbjct: 361 ILCIEKALAQSGVAKEDVNYINAHATSTPAGDLKEYHALMHCFGRNSGLRVNSTKSMIGH 420
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGA+GAVEAIA VQAIRTGW+HPNINLENP+ +DT+VLVGPKKERL++KAALSNSFGF
Sbjct: 421 LLGASGAVEAIAAVQAIRTGWVHPNINLENPEQGMDTSVLVGPKKERLDIKAALSNSFGF 480
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+P+K
Sbjct: 481 GGHNSSIIFAPFK 493
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/433 (86%), Positives = 408/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP +EVTTKKKP +Q+RVVVTGMG++SP+GHEPD FYNNLLEGVSGISEIE+FD
Sbjct: 123 MAVAVQPAKEVTTKKKPLTEQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFD 182
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C+ FPT+IA EIKSFSTDGW+APKLSKRMDKFMLY+LTAGKKALADGGITEDV +ELDKS
Sbjct: 183 CSHFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKS 242
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
+CGVLIGS +GG+KVF DAIEALR+SY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 243 RCGVLIGSAMGGIKVFNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 302
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNA+NHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRNNDPTKAS
Sbjct: 303 STACATSNFCILNASNHIIRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKAS 362
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF GGSFT DAYHMTEPHPDG GV
Sbjct: 363 RPWDTNRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFLGGSFTCDAYHMTEPHPDGAGV 422
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIE ALA SGVSREDVNYINAHATST AGD +EYQAL+ CFGQN L+VNSTKSMIGH
Sbjct: 423 ILCIESALARSGVSREDVNYINAHATSTLAGDFREYQALVRCFGQNPELKVNSTKSMIGH 482
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLE+P+ VDT++LVG KKERL++K ALSNSFGF
Sbjct: 483 LLGAAGAVEAIATIQAIRTGWVHPNINLESPEEGVDTDLLVGSKKERLDIKVALSNSFGF 542
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 543 GGHNSSIIFAPYK 555
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/433 (86%), Positives = 408/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP +EVTTKKKP +Q+RVVVTGMG++SP+GHEPD FYNNLLEGVSGISEIE+FD
Sbjct: 85 MAVAVQPAKEVTTKKKPLTEQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFD 144
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C+ FPT+IA EIKSFSTDGW+APKLSKRMDKFMLY+LTAGKKALADGGITEDV +ELDKS
Sbjct: 145 CSHFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKS 204
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
+CGVLIGS +GG+KVF DAIEALR+SY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 205 RCGVLIGSAMGGIKVFNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 264
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNA+NHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRNNDPTKAS
Sbjct: 265 STACATSNFCILNASNHIIRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKAS 324
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF GGSFT DAYHMTEPHPDG GV
Sbjct: 325 RPWDTNRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFLGGSFTCDAYHMTEPHPDGAGV 384
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIE ALA SGVSREDVNYINAHATST AGD +EYQAL+ CFGQN L+VNSTKSMIGH
Sbjct: 385 ILCIESALARSGVSREDVNYINAHATSTLAGDFREYQALVRCFGQNPELKVNSTKSMIGH 444
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLE+P+ VDT++LVG KKERL++K ALSNSFGF
Sbjct: 445 LLGAAGAVEAIATIQAIRTGWVHPNINLESPEEGVDTDLLVGSKKERLDIKVALSNSFGF 504
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 505 GGHNSSIIFAPYK 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/433 (86%), Positives = 409/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP++EV T KKP MKQ+RVVVTGMG+VSPLGH+ DV+YNNLL+G SGIS+I++FD
Sbjct: 122 MAVAVQPEKEVATNKKPLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFD 181
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+LTAGKKALADGGITED+M+ELDK+
Sbjct: 182 CAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKA 241
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
+CGVLIGS +GGMKVF DAIEALRISY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 242 RCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 301
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRN+DPTKAS
Sbjct: 302 STACATSNFCILNAANHIIRGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKAS 361
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEP PDGVGV
Sbjct: 362 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGV 421
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGVS+E+VNYINAHATSTPAGD+KEY+AL+ CF QN LRVNSTKSMIGH
Sbjct: 422 ILCIEKALARSGVSKEEVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGH 481
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLENP+ VDT VLVGPKKERL++K ALSNSFGF
Sbjct: 482 LLGAAGAVEAIATIQAIRTGWVHPNINLENPEEGVDTKVLVGPKKERLDIKVALSNSFGF 541
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 542 GGHNSSIIFAPYK 554
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/433 (86%), Positives = 409/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP++EV T KKP MKQ+RVVVTGMG+VSPLGH+ DV+YNNLL+G SGIS+I++FD
Sbjct: 103 MAVAVQPEKEVATNKKPLMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFD 162
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+LTAGKKALADGGITED+M+ELDK+
Sbjct: 163 CAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKA 222
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
+CGVLIGS +GGMKVF DAIEALRISY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 223 RCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 282
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRN+DPTKAS
Sbjct: 283 STACATSNFCILNAANHIIRGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKAS 342
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEP PDGVGV
Sbjct: 343 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGV 402
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGVS+E+VNYINAHATSTPAGD+KEY+AL+ CF QN LRVNSTKSMIGH
Sbjct: 403 ILCIEKALARSGVSKEEVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGH 462
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLENP+ VDT VLVGPKKERL++K ALSNSFGF
Sbjct: 463 LLGAAGAVEAIATIQAIRTGWVHPNINLENPEEGVDTKVLVGPKKERLDIKVALSNSFGF 522
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 523 GGHNSSIIFAPYK 535
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3800747|gb|AAC68860.1| 3-ketoacyl-ACP synthase [Cuphea avigera var. pulcherrima] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/432 (88%), Positives = 407/432 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVA+QP++EVTTKKKP +KQ+RVVVTGMG+V+PLGH+PDVFYNNLL+G SGISEIETFD
Sbjct: 114 MAVALQPEQEVTTKKKPSIKQRRVVVTGMGVVTPLGHDPDVFYNNLLDGTSGISEIETFD 173
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+LTAGKKAL DGGITEDVM ELDK
Sbjct: 174 CAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYMLTAGKKALTDGGITEDVMKELDKR 233
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 234 KCGVLIGSAMGGMKVFNDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 293
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCI+NAANHIIRGEA+VMLCGGSDA +IPIG+GGFVACRALSQRN+DPTKAS
Sbjct: 294 STACATSNFCIMNAANHIIRGEADVMLCGGSDAVIIPIGMGGFVACRALSQRNSDPTKAS 353
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEPHPDG GV
Sbjct: 354 RPWDSNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGV 413
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR L+VNSTKSMIGH
Sbjct: 414 ILCIEKALAQSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRELKVNSTKSMIGH 473
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAG VEA++VVQAIRTGWIHPNINLENPD VDT +LVGPKKERL VK LSNSFGF
Sbjct: 474 LLGAAGGVEAVSVVQAIRTGWIHPNINLENPDEGVDTKLLVGPKKERLNVKVGLSNSFGF 533
Query: 421 GGHNSSIIFSPY 432
GGHNSSI+F+PY
Sbjct: 534 GGHNSSILFAPY 545
|
Source: Cuphea avigera var. pulcherrima Species: Cuphea avigera Genus: Cuphea Family: Lythraceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|346995771|gb|ABJ90469.2| beta-ketoacyl-ACP synthase II [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/433 (87%), Positives = 411/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MA+AVQP++EV TKKKP KQ+RVVVTGMG+VSPLGHEPDVFYNNLLEGVSGIS+IE F+
Sbjct: 141 MAIAVQPEKEVATKKKPATKQRRVVVTGMGVVSPLGHEPDVFYNNLLEGVSGISQIEAFE 200
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGW+APKLSKRMDKFMLY+LTAGKKALADGGITED+M+ELDK+
Sbjct: 201 CAQFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDIMDELDKA 260
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALR+SY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 261 KCGVLIGSAMGGMKVFNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 320
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRN+DP KAS
Sbjct: 321 STACATSNFCILNAANHIIRGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPAKAS 380
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEP P G+GV
Sbjct: 381 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPGGIGV 440
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILC+EKALA SGVSREDVNYINAHATSTPAGDIKE+ AL+HCFGQN GLRVNSTKSMIGH
Sbjct: 441 ILCVEKALAQSGVSREDVNYINAHATSTPAGDIKEFGALMHCFGQNPGLRVNSTKSMIGH 500
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLENPD VDTNVLVGPKKERL+VK ALSNSFGF
Sbjct: 501 LLGAAGAVEAIAAIQAIRTGWVHPNINLENPDEGVDTNVLVGPKKERLDVKVALSNSFGF 560
Query: 421 GGHNSSIIFSPYK 433
GGHNSSI+F+P+K
Sbjct: 561 GGHNSSIVFAPHK 573
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141567|ref|XP_002324139.1| predicted protein [Populus trichocarpa] gi|222865573|gb|EEF02704.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/433 (87%), Positives = 411/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP EV TKKKP +Q+RVVVTGMG+VSPLGH+P VFYNNLL+GVSG++ IE FD
Sbjct: 65 MAVAVQPTREVETKKKPLTRQRRVVVTGMGVVSPLGHDPGVFYNNLLQGVSGVTRIEAFD 124
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+LTAGKKALADGGITEDVM+EL+K+
Sbjct: 125 CAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDVMDELNKT 184
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 185 KCGVLIGSAMGGMKVFNDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 244
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA+VMLCGGSDAA+IPIGLGGFVACRALSQRN+DPT+AS
Sbjct: 245 STACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTRAS 304
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA I+AEF GGSFT DAYHMTEP PDGVGV
Sbjct: 305 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIHAEFLGGSFTCDAYHMTEPRPDGVGV 364
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKAL+ SG+S+EDVNYINAHATSTPAGD+KEYQAL+HCFGQN GLRVN+TKSMIGH
Sbjct: 365 ILCIEKALSQSGISKEDVNYINAHATSTPAGDLKEYQALMHCFGQNSGLRVNATKSMIGH 424
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA +QAIRTGW+HPNINLENPD VDT+VLVGPKKERL++KAALSNSFGF
Sbjct: 425 LLGAAGAVEAIAAIQAIRTGWVHPNINLENPDQGVDTSVLVGPKKERLDIKAALSNSFGF 484
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+P+K
Sbjct: 485 GGHNSSIIFAPFK 497
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|300507129|gb|ADK23940.1| KASII [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/433 (87%), Positives = 404/433 (93%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MA+AVQP E+TTKKKP KQ+RVVVTGMG+V+PLGHEPDVFYNNLLEGVSGISEIETFD
Sbjct: 144 MAIAVQPTREITTKKKPPTKQRRVVVTGMGVVTPLGHEPDVFYNNLLEGVSGISEIETFD 203
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY LTAGKKAL DGG+ EDVM ELDK+
Sbjct: 204 CAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYSLTAGKKALQDGGVNEDVMEELDKT 263
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCG LIGS +GGMKVF DAIEALRISY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 264 KCGALIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA++MLCGGSDAA+IPIGLGGFVACRALSQRNNDPTKAS
Sbjct: 324 STACATSNFCILNAANHIIRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKAS 383
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVMGEGAGVLLLEELEHAK+RGA IYAEF GGSFT DAYHMTEPHPDGVGV
Sbjct: 384 RPWDANRDGFVMGEGAGVLLLEELEHAKRRGATIYAEFLGGSFTCDAYHMTEPHPDGVGV 443
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIE+ALAH+GVSR D+NYINA ATSTP GDIKEYQAL+HCFG+N LRVNSTKSMIGH
Sbjct: 444 ILCIEEALAHAGVSRGDINYINARATSTPTGDIKEYQALLHCFGENPELRVNSTKSMIGH 503
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGA+GAVEA A +QAIRTGW+HPNINLENPD VDT+VLVGP KERL VKAALSNSFGF
Sbjct: 504 LLGASGAVEAAATIQAIRTGWVHPNINLENPDVGVDTSVLVGPNKERLNVKAALSNSFGF 563
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 564 GGHNSSIIFAPYK 576
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|210110425|gb|ACJ07142.1| beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/433 (87%), Positives = 405/433 (93%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAV+P EVTT KKP KQ+RVVVTG+G+V+PLGHEPDV+YNNLL+GVSGISEIETFD
Sbjct: 116 MAVAVEPAHEVTTTKKPPTKQRRVVVTGLGVVTPLGHEPDVYYNNLLDGVSGISEIETFD 175
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C +PT+IA EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKAL DGGITEDVM+EL+K
Sbjct: 176 CAEYPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALVDGGITEDVMDELNKE 235
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALR+SYKKMNPFCVPFATTNMGSA+LAMDLGWMGPNYSI
Sbjct: 236 KCGVLIGSAMGGMKVFNDAIEALRVSYKKMNPFCVPFATTNMGSAILAMDLGWMGPNYSI 295
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA+VMLCGGSDAA+IPIGLGGFVACRALSQRN DPTKAS
Sbjct: 296 STACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNTDPTKAS 355
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWDINRDGFVMGEGAGVLLLE+LEHAKKRGA IYAEF GGSFT DAYH+TEP PDG GV
Sbjct: 356 RPWDINRDGFVMGEGAGVLLLEDLEHAKKRGATIYAEFLGGSFTCDAYHVTEPRPDGAGV 415
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGVS+EDVNYINAHATSTPAGD+KE+QAL+HCFGQN LRVNSTKSMIGH
Sbjct: 416 ILCIEKALAQSGVSKEDVNYINAHATSTPAGDLKEFQALLHCFGQNPELRVNSTKSMIGH 475
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAG VEA+A VQAIRTGW+HPNINLENPD VD VLVG KKERL++KAALSNSFGF
Sbjct: 476 LLGAAGGVEAVATVQAIRTGWVHPNINLENPDQGVDAKVLVGSKKERLDIKAALSNSFGF 535
Query: 421 GGHNSSIIFSPYK 433
GGHNSSIIF+PYK
Sbjct: 536 GGHNSSIIFAPYK 548
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 433 | ||||||
| TAIR|locus:2027252 | 541 | FAB1 "fatty acid biosynthesis | 0.997 | 0.798 | 0.741 | 2e-175 | |
| UNIPROTKB|Q9KQH9 | 414 | fabF "3-oxoacyl-[acyl-carrier- | 0.896 | 0.937 | 0.411 | 1.5e-74 | |
| TIGR_CMR|VC_2019 | 414 | VC_2019 "3-oxoacyl-(acyl-carri | 0.896 | 0.937 | 0.411 | 1.5e-74 | |
| TIGR_CMR|CBU_0497 | 414 | CBU_0497 "3-oxoacyl-acyl carri | 0.889 | 0.929 | 0.415 | 3.1e-74 | |
| UNIPROTKB|P0AAI5 | 413 | fabF "FabF" [Escherichia coli | 0.866 | 0.907 | 0.415 | 4.1e-72 | |
| TIGR_CMR|GSU_1605 | 410 | GSU_1605 "3-oxoacyl-(acyl-carr | 0.882 | 0.931 | 0.403 | 6.1e-71 | |
| TIGR_CMR|CHY_1445 | 412 | CHY_1445 "3-oxoacyl-(acyl-carr | 0.898 | 0.944 | 0.387 | 9.9e-71 | |
| TIGR_CMR|SO_2774 | 412 | SO_2774 "3-oxoacyl-(acyl-carri | 0.866 | 0.910 | 0.405 | 1.6e-70 | |
| TIGR_CMR|CPS_2299 | 412 | CPS_2299 "3-oxoacyl-[acyl-carr | 0.898 | 0.944 | 0.387 | 4.9e-69 | |
| TIGR_CMR|ECH_0882 | 422 | ECH_0882 "3-oxoacyl-(acyl-carr | 0.849 | 0.872 | 0.391 | 2.4e-67 |
| TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1704 (604.9 bits), Expect = 2.0e-175, P = 2.0e-175
Identities = 321/433 (74%), Positives = 355/433 (81%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAV ++ ++E KKP +Q+RVVVTGMG+ + LGH+P FY NLL+G SGIS+IE FD
Sbjct: 110 MAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFD 168
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLLTAGKKALADGG+T++VM E DK+
Sbjct: 169 CSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKT 228
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 229 KCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 288
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILN+ANHII+GEA+VMLCGGSDA +IPIGLGGFVACRALSQRNNDPTKAS
Sbjct: 289 STACATSNFCILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKAS 348
Query: 241 RPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD NRDGFVM HAKKRGA IYAEF GGSFT DAYHMTEPHPDG GV
Sbjct: 349 RPWDTNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGV 408
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIE+ALA +G+S+E +NYINAHATST AGDIKEYQAL HCFGQN L+VNSTKSMIGH
Sbjct: 409 ILCIERALASAGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGH 468
Query: 361 LLXXXXXXXXXXXXXXXRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALXXXXXX 420
LL RTGW+HPNINLENPD+ VDT +LVGPKKERL++KAAL
Sbjct: 469 LLGAAGAVEAVATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGF 528
Query: 421 XXXXXXXXXXPYK 433
PYK
Sbjct: 529 GGHNSSIIFAPYK 541
|
|
| UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/396 (41%), Positives = 236/396 (59%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 257
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 258 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
HAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXX 375
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 376 XXRTGWIHPNINLENPDAVVDTNVL--VGPKKERLE 409
+ P INL+NP+ + +++ V K E +E
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESME 393
|
|
| TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/396 (41%), Positives = 236/396 (59%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 257
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 258 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
HAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXX 375
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 376 XXRTGWIHPNINLENPDAVVDTNVL--VGPKKERLE 409
+ P INL+NP+ + +++ V K E +E
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESME 393
|
|
| TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 162/390 (41%), Positives = 226/390 (57%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 139 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 257
I +A+ M+ GG++ A P+G+GGF A RALS RN++P KASRPWD RDGFV+
Sbjct: 178 IAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAA 237
Query: 258 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
HAKKR A IYAE G + DAYHMT P P+ G C++ +L +G++ E
Sbjct: 238 CVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPER 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXX 376
V+YINAH TSTPA D E +A+ FG + L V+STKSM GH+L
Sbjct: 298 VDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLA 357
Query: 377 XRTGWIHPNINLENPDAVVDTNVLVGPKKE 406
R P INLENPD D + + +E
Sbjct: 358 IRDNTAPPTINLENPDEGCDLDFVPNEARE 387
|
|
| UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 158/380 (41%), Positives = 224/380 (58%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K ++MD F+ Y + AG +A+ D G+ + E + ++ G IGSG+GG+ + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLE---ITEENATRIGAAIGSGIGGLGLIEE 117
Query: 139 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+L +K++PF VP NM + L + G GP+ SI+TAC + I +AA
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 257
I G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+
Sbjct: 178 IAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAG 237
Query: 258 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
HAKKRGAKIYAE G +SDAYHMT P +G G L + AL +G+
Sbjct: 238 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXX 376
+ Y+NAH TSTPAGD E QA+ FG+ + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA 357
Query: 377 XRTGWIHPNINLENPDAVVD 396
R + P INL+NPD D
Sbjct: 358 LRDQAVPPTINLDNPDEGCD 377
|
|
| TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 157/389 (40%), Positives = 220/389 (56%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G VSPLG ++ L+ G SGI I FD + P +IA E+K F + ++
Sbjct: 2 RRVVVTGVGAVSPLGVGNAANWDALVSGTSGIGHITRFDASDLPVRIAGEVKGFDPEQYI 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF--YDA 139
K K+MD F+ Y + A A+ D G+ + E + + GVL+G+GLGG+ Y A
Sbjct: 62 DKKEVKKMDLFIQYAMAAAHYAMEDSGLQ---ITEENAERTGVLVGAGLGGLPTIEKYHA 118
Query: 140 IEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 199
L +KK++PF +P N+ +++ G GPN S +ACAT I +A + I
Sbjct: 119 A-MLEGGHKKISPFFIPMLIINLAPGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIK 177
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXX 259
RG+A+ M+ GG+++ V P+G+GGF +ALS RN+DPT ASRP++ NRDGFV+
Sbjct: 178 RGDADAMIAGGTESTVTPLGIGGFAVMKALSTRNDDPTAASRPFEKNRDGFVLAEGAGIV 237
Query: 260 XXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319
AKKRGAKIYAE G T DAYH+T P P+G G C++ AL ++GV E+V+
Sbjct: 238 VLEEYEAAKKRGAKIYAEIVGYGLTGDAYHLTAPAPEGEGAARCMKMALNNAGVRPEEVD 297
Query: 320 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXR 378
YINAH TSTP D E A+ FG + + V+STKSM GHLL
Sbjct: 298 YINAHGTSTPFNDYYETLAVKSVFGDYAKKVMVSSTKSMTGHLLGAAGGVEAVFTLMAMD 357
Query: 379 TGWIHPNINLENPDAVVDTNVLVGPKKER 407
G I P IN + D D + + +E+
Sbjct: 358 KGVIPPTINYQEQDPECDLDYVPNAAREK 386
|
|
| TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 153/395 (38%), Positives = 230/395 (58%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
KRVVVTG+GL+SPLG ++NL++GVSG+ E+ +FD T F T+IAAE++ F ++
Sbjct: 2 KRVVVTGLGLISPLGIGIKENWDNLMKGVSGVREVSSFDTTGFATRIAAEVRDFDPLKFI 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K ++RMD+F + + A K A+ D G+ +++++ + G+ IGSG+GG+K +
Sbjct: 62 DKKEARRMDRFTQFAVAATKLAIEDAGLE---LSKINPERAGIFIGSGIGGIKTLEEQAA 118
Query: 142 ALRISYK-KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
LR +++PF VP NM +A+ G GPN +I +ACA+ + +A + R
Sbjct: 119 ILREKGPDRVSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQR 178
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXX 260
GE +V + GG++AA+ P+ GF + +A+S RN++P KASRP+D +RDGFVM
Sbjct: 179 GEVDVAIAGGAEAAITPLSFAGFCSMKAMSTRNDEPEKASRPFDKDRDGFVMGEGAGILI 238
Query: 261 XXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320
HA RGA+IY E G TSDAYH+T P P+G G +E AL + ++ ED++Y
Sbjct: 239 LETLEHALARGARIYGEIVGYGVTSDAYHITAPDPEGKGAARAMELALKDARLNPEDIDY 298
Query: 321 INAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRT 379
INAH TSTP D E A+ FG + L V+STKSM GHLL
Sbjct: 299 INAHGTSTPLNDKVETLAIKKVFGDHAYKLMVSSTKSMTGHLLGAAGGIETIYSILAVFF 358
Query: 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414
+ P +N + P+ +D + + ++ + VKAAL
Sbjct: 359 NQVPPTLNCDEPEEGLDLDYVPNTGRDTV-VKAAL 392
|
|
| TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 154/380 (40%), Positives = 218/380 (57%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTG+GLV+P+G+ D + LL G SGI+ I FD + F T+ + +K F +
Sbjct: 1 MSKRRVVVTGLGLVTPVGNTVDTTWKALLSGKSGIAPITKFDASEFTTRFSGSVKDFDVE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K +++MD F+ Y + AG +A+ D G+ M++++ + G IG+G+GGM +
Sbjct: 61 QYLTKKDARKMDLFIQYGMAAGIQAIQDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQ 117
Query: 139 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
AL +K++PF VP NM + L++ G GPN++++TAC T I AA
Sbjct: 118 NHSALMNGGPRKISPFFVPSTIINMIAGHLSIMYGMTGPNFAVTTACTTGVHNIGFAART 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 257
I G+A+VM+ GG++ P+G+GGF A +ALS RN+DPT ASRPWD +RDGFV+
Sbjct: 178 IAYGDADVMVAGGAEDVTCPLGVGGFGAAKALSTRNDDPTAASRPWDKDRDGFVIGDGAG 237
Query: 258 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
HAK RGA IY E G + DA+HMT P DG G + A+ + + E
Sbjct: 238 VMVMEEYEHAKARGATIYGELVGFGMSGDAFHMTSPPSDGAGAAAAMVNAVNDAKLPLEK 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXX 376
+ YINAH TSTPAGD E A+ FG + L V+STKSM GHLL
Sbjct: 298 IGYINAHGTSTPAGDKAEAAAVKSVFGDHAYNLLVSSTKSMTGHLLGAAGAVEAIFTLLA 357
Query: 377 XRTGWIHPNINLENPDAVVD 396
R + P INL+NPD D
Sbjct: 358 LRDQAVPPTINLDNPDEGCD 377
|
|
| TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 154/397 (38%), Positives = 225/397 (56%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G++SPL + + + NLL G SGI I+ FD T +PTK A +K F ++
Sbjct: 2 RRVVVTGIGMLSPLANTAEETWQNLLLGKSGIGNIDHFDTTDYPTKFAGLVKDFDAQNYM 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF---YD 138
K +K+MD F+ Y + AG +A D G+ + E + + GV IGSG+GG+ + ++
Sbjct: 62 ERKEAKKMDLFIQYGIAAGVQAFKDSGLE---VTEQNAPRIGVAIGSGIGGLGLIEQNHN 118
Query: 139 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 198
+ + +K++PF VP NM + L++ G GPN +I+TAC + I +AA I
Sbjct: 119 KLIKAEGNPRKLSPFFVPSTIINMIAGHLSIMFGLQGPNIAITTACTSGVHNIGHAARMI 178
Query: 199 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXX 258
G+A+ ++ GG++ A +G+GGF A RALS+RN+DP ASRPWD +RDGFV+
Sbjct: 179 AYGDADAVVAGGAEKASTTLGMGGFGAARALSRRNDDPEAASRPWDKDRDGFVLGDGAGV 238
Query: 259 XXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318
HAK RGAKIYAE G + DAYHMT P +G G ++ A+ + V +
Sbjct: 239 IVVEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPPENGDGAARAMQNAINDAKVDISRI 298
Query: 319 NYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXXXXXXXXXXXX 377
YINAH TST AGD+ E A+ FG + + + STKSM GHLL
Sbjct: 299 GYINAHGTSTQAGDMAETNAVKTVFGAGAKNVMMGSTKSMTGHLLGAAGAIEAIFSIQAL 358
Query: 378 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414
+ P INL+NPD D + + G ++ +E++ L
Sbjct: 359 VNKQVPPTINLDNPDEGCDLDYIAGAARD-VELEYVL 394
|
|
| TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 149/381 (39%), Positives = 225/381 (59%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS---- 74
M +KRVV+TG+GLV+ LG + +++L +G+SGI +I+ FD + K+A ++ +
Sbjct: 1 MAKKRVVITGLGLVTSLGSDLKTVWDSLSKGISGIRKIDRFDTSDLDCKVAGQVTTKPES 60
Query: 75 ----FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 130
F ++ K K+MD F+ + + + +A+ D + + +LD S+ GV++GSG+
Sbjct: 61 EEYIFDAGDYIPEKDLKKMDTFIHFGIASATQAINDSNLLD--YKDLDYSRVGVIVGSGI 118
Query: 131 GGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 189
GG++ + L+ K+++PF +P + N+ S ++M G+ G N ++ TAC+T
Sbjct: 119 GGLQFIEKTVICLKERGPKRISPFFIPASLINLTSGHISMKYGFTGLNDAVVTACSTGAQ 178
Query: 190 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRD 248
I NAA I GEA+V++ GG+++A+ IG+ GF A +ALS + ND P ASRPWD RD
Sbjct: 179 AIGNAARVIQSGEADVIIAGGTESAICRIGIAGFAAMKALSTKFNDTPELASRPWDKQRD 238
Query: 249 GFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 308
GFVM HAKKRGA+IY E G TSDAYHM+ PHP+G G I IE AL
Sbjct: 239 GFVMGEGSGVVILEDYEHAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELAL 298
Query: 309 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXX 367
+++ ++ E +NYINAH TSTP GD E QA+ + F ++ + ++STKS IGHLL
Sbjct: 299 SNAQLNPESINYINAHGTSTPIGDSIEIQAIKNVFKESVYKVPISSTKSSIGHLLGAAGS 358
Query: 368 XXXXXXXXXXRTGWIHPNINL 388
TG P +NL
Sbjct: 359 VEAIFCILAMNTGIAPPTLNL 379
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P63455 | FAB1_MYCBO | 2, ., 3, ., 1, ., 4, 1 | 0.3491 | 0.8845 | 0.9206 | yes | no |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4565 | 0.9422 | 0.9855 | yes | no |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4393 | 0.9445 | 0.9903 | yes | no |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.3928 | 0.9399 | 0.8867 | yes | no |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4110 | 0.9445 | 0.9879 | yes | no |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4393 | 0.9445 | 0.9903 | yes | no |
| P57193 | FABB_BUCAI | 2, ., 3, ., 1, ., 4, 1 | 0.3542 | 0.9260 | 0.9876 | yes | no |
| O94297 | OXSM_SCHPO | 2, ., 3, ., 1, ., 4, 1 | 0.3723 | 0.9399 | 0.9553 | yes | no |
| O34340 | FABF_BACSU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4436 | 0.9468 | 0.9927 | yes | no |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4615 | 0.9376 | 0.9806 | yes | no |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4152 | 0.9237 | 0.9925 | yes | no |
| Q9CBS7 | FAB1_MYCLE | 2, ., 3, ., 1, ., 4, 1 | 0.355 | 0.8868 | 0.9230 | yes | no |
| P63456 | FAB2_MYCTU | 2, ., 3, ., 1, ., 4, 1 | 0.3464 | 0.9376 | 0.9736 | yes | no |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4086 | 0.9445 | 0.9879 | yes | no |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4110 | 0.9445 | 0.9879 | yes | no |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4541 | 0.9399 | 0.9807 | yes | no |
| P39525 | CEM1_YEAST | 2, ., 3, ., 1, ., 4, 1 | 0.3340 | 0.9307 | 0.9117 | yes | no |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.3853 | 0.9330 | 0.8782 | yes | no |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4086 | 0.9445 | 0.9879 | yes | no |
| P63454 | FAB1_MYCTU | 2, ., 3, ., 1, ., 4, 1 | 0.3491 | 0.8845 | 0.9206 | yes | no |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4116 | 0.9376 | 0.9806 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4431 | 0.9376 | 0.9643 | yes | no |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.3905 | 0.9376 | 0.8845 | yes | no |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4110 | 0.9445 | 0.9879 | yes | no |
| P23902 | KASC1_HORVU | 2, ., 3, ., 1, ., 4, 1 | 0.5600 | 0.9515 | 0.8917 | N/A | no |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.3301 | 0.9260 | 0.9852 | yes | no |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.3743 | 0.9237 | 0.9852 | yes | no |
| Q9C9P4 | KASC2_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.8360 | 0.9976 | 0.7985 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 433 | |||
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 0.0 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 0.0 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-164 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-134 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-124 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-123 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-122 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 2e-93 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 2e-90 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 3e-88 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 7e-80 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-78 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 3e-75 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 1e-68 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 3e-65 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 2e-62 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 3e-59 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 4e-57 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 1e-51 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 5e-48 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 2e-41 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 1e-39 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-31 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 3e-25 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 1e-21 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 2e-05 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 4e-05 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 1e-04 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 0.003 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 0.004 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 897 bits (2318), Expect = 0.0
Identities = 386/433 (89%), Positives = 411/433 (94%)
Query: 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD 60
MAVAVQP++EV TKKKP KQ+RVVVTGMG+VSPLGH+PDVFYNNLLEGVSGISEIE FD
Sbjct: 108 MAVAVQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFD 167
Query: 61 CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS 120
C+ FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVM ELDK+
Sbjct: 168 CSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKT 227
Query: 121 KCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180
KCGVLIGS +GGMKVF DAIEALRISY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI
Sbjct: 228 KCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 287
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACATSNFCILNAANHIIRGEA+VMLCGGSDAA+IPIGLGGFVACRALSQRN+DPTKAS
Sbjct: 288 STACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKAS 347
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT DAYHMTEPHP+G GV
Sbjct: 348 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGV 407
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
ILCIEKALA SGVS+EDVNYINAHATST AGD+KEYQAL+ CFGQN LRVNSTKSMIGH
Sbjct: 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGH 467
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
LLGAAGAVEAIA VQAIRTGW+HPNINLENP++ VDT VLVGPKKERL++K ALSNSFGF
Sbjct: 468 LLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGF 527
Query: 421 GGHNSSIIFSPYK 433
GGHNSSI+F+PYK
Sbjct: 528 GGHNSSILFAPYK 540
|
Length = 540 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 566 bits (1460), Expect = 0.0
Identities = 206/410 (50%), Positives = 279/410 (68%), Gaps = 6/410 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVV+TG+G V+PLG+ + F+ LL G SGI I FD + FP++IA E+ F + ++
Sbjct: 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYL 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K +RMD+F + L A ++ALAD G+ + ELD + GV+IGSG+GG+ +A
Sbjct: 61 DRKELRRMDRFAQFALAAAEEALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYR 117
Query: 142 ALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
AL ++++PF VP A NM + +A+ LG GPNY++STACA+ I +AA I
Sbjct: 118 ALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRL 177
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
G A+V++ GG++A + P+ L GF A RALS RN+DP KASRP+D +RDGFV+GEGAGVL+
Sbjct: 178 GRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237
Query: 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320
LE LEHAK RGAKIYAE G +SDAYH+T P PDG G + ALA +G+S ED++Y
Sbjct: 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDY 297
Query: 321 INAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379
INAH TSTP D E +A+ FG+ + + V+STKSM GHLLGAAGAVEAIA + A+R
Sbjct: 298 INAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRD 357
Query: 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
G + P INLE PD D + + +E ++ ALSNSFGFGGHN+S++F
Sbjct: 358 GVLPPTINLEEPDPECDLDYVPNEAREA-PIRYALSNSFGFGGHNASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 545 bits (1406), Expect = 0.0
Identities = 202/410 (49%), Positives = 277/410 (67%), Gaps = 6/410 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G V+PLG+ + F+ NLL G SGI I FD + P KIA E+K F + ++
Sbjct: 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K ++RMD+F+ Y L A K+A+ D G+ + E D + GV+IGSG+GG++ +
Sbjct: 61 DKKEARRMDRFIQYALAAAKEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHI 117
Query: 142 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
L ++++PF +P + NM + +++ G GPN+++ TACAT I +A I R
Sbjct: 118 VLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQR 177
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
G+A+VM+ GG++AA+ P+G+ GF A +ALS RN+DP KASRP+D +RDGFVMGEGAGVL+
Sbjct: 178 GDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237
Query: 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320
LEELEHAK RGAKIYAE G + DAYH+T P P+G G + AL +G++ EDV+Y
Sbjct: 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDY 297
Query: 321 INAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379
INAH TSTP GD E +A+ FG + L V+STKSM GHLLGAAGA+EAI V A+R
Sbjct: 298 INAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLALRD 357
Query: 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
G + P INL+NPD D + V + ++ ALSNSFGFGGHN+S++F
Sbjct: 358 GIVPPTINLDNPDPECDLD-YVPNEAREAKIDYALSNSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 526 bits (1358), Expect = 0.0
Identities = 186/425 (43%), Positives = 255/425 (60%), Gaps = 12/425 (2%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS---- 74
M +KR+VVTGMG VSPLG + F+ LL G SGI + F TKI ++
Sbjct: 1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAED 60
Query: 75 ----FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 130
F D ++ PK ++MD+F+L+ + A K+ALA G D D+ + +IGSG+
Sbjct: 61 AEAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPD--TLEDRERTATIIGSGV 118
Query: 131 GGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 189
GG +A+ L ++++PF +P TNM + +++ G+ GP + TACA
Sbjct: 119 GGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQ 178
Query: 190 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRD 248
I +AA I GEA+V +CGG++AA+ + L GF A RALS R ND P +ASRP+D +RD
Sbjct: 179 AIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238
Query: 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 308
GFVMGEGAG+L++E LEHA RGA AE G ++DAYHMT DG G + AL
Sbjct: 239 GFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIAL 298
Query: 309 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAV 368
+G+ E+V ++NAHATSTP GD+ E A+ FG GL V+STKS GHLLGAAG V
Sbjct: 299 RQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGV 358
Query: 369 EAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
EAI + A+R P +NLENPD + +V K +++ ALSN FGFGG N+SI+
Sbjct: 359 EAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASIL 418
Query: 429 FSPYK 433
F ++
Sbjct: 419 FRRWE 423
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 524 bits (1352), Expect = 0.0
Identities = 209/414 (50%), Positives = 282/414 (68%), Gaps = 6/414 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G VSPLG++ + + NLL G SGI I FD + KIA E+K F+ D ++
Sbjct: 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYM 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
+ K ++RMD+F+ Y + A K+A+ D G+ + E + + GV+IGSG+GG++ +
Sbjct: 62 SRKEARRMDRFIQYGIAAAKQAVEDAGL---EITEENADRIGVIIGSGIGGLETIEEQHI 118
Query: 142 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
L ++++PF VP A NM + +++ G GPN+SI TACAT I +AA I
Sbjct: 119 TLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAY 178
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
G+A+VM+ GG++AA+ P+G+ GF A RALS RN+DP +ASRP+D +RDGFVMGEGAG+L+
Sbjct: 179 GDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILV 238
Query: 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320
LEELEHAK RGAKIYAE G T DAYHMT P PDG G ++ AL +G++ ED++Y
Sbjct: 239 LEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDY 298
Query: 321 INAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379
INAH TSTPAGD E QA+ FG+ + V+STKSM GHLLGAAGAVEAI V AIR
Sbjct: 299 INAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRD 358
Query: 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
I P INL+NPD D + + +ER ++ ALSNSFGFGG N+S++F Y+
Sbjct: 359 QVIPPTINLDNPDEECDLDYVPNEARER-KIDYALSNSFGFGGTNASLVFKRYE 411
|
Length = 411 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 467 bits (1205), Expect = e-164
Identities = 200/414 (48%), Positives = 266/414 (64%), Gaps = 8/414 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVV+TG+G+VS LG+ + + LL G SGI I FD + KIA EIK D +
Sbjct: 3 RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQI 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
A K + MD+F + A +AL D G+ + + GV IGSG+GG++ ++
Sbjct: 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNE---LNVDMRVGVAIGSGIGGLEDIEFDLD 117
Query: 142 ALRISY--KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 199
AL + K+++PF VP N+ + +A+ G GPNY+ TACAT I +A I
Sbjct: 118 ALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259
G+A+V++ GG++AA+ P+G+ GF A RALS RN+DP KASRP+D NRDGFV+GEGAG L
Sbjct: 178 LGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGAL 237
Query: 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319
+LEELEHA RGAKIYAE G TSDAYH+T P PDG G I + ALA +G++ ED++
Sbjct: 238 VLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDID 297
Query: 320 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378
YINAH TSTPA D E A+ FG++ + L V+STKS+ GH LGAAGAVEAI + A+R
Sbjct: 298 YINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALR 357
Query: 379 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432
G I P INL+NPD +V + V+AALSNSFGFGG N+S++F Y
Sbjct: 358 DGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411
|
Length = 412 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 392 bits (1008), Expect = e-134
Identities = 177/424 (41%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 31 LVSPLGHEPDVFYNNLLEGVSGISEIETFDC----------------TSFPTKIAAEIKS 74
+V+PLG + + L+ G SGI ++ F + P +IAAE+
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60
Query: 75 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 134
D +KR + + + A ++ALAD + D+++E D+ + GV IGSG+G +
Sbjct: 61 SEFDP-SDFAPTKRESRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGSLA 117
Query: 135 VFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 193
D ++ L + +++P+ +P NM + ++A+ GP+ S TACAT CI
Sbjct: 118 DLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGE 177
Query: 194 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVM 252
A I GEA++M+CGG++A++ P+ GF RAL + N+DP +ASRP+D +R GFVM
Sbjct: 178 AFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVM 237
Query: 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 312
GEGAG+L+LEELEHA +RGAKIYAE RG +SDA+H+T PHPDG G C+E AL
Sbjct: 238 GEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGA 297
Query: 313 -VSREDVNYINAHATSTPAGDIKEYQALIHCFG--QNRGLRVNSTKSMIGHLLGAAGAVE 369
++ DV+Y+NAHATSTP GD E +A+ FG L V+STK +GHLLGAAGAVE
Sbjct: 298 NININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVE 357
Query: 370 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-VKAALSNSFGFGGHNSSII 428
+I + ++ I P INLENPDA D N++ G L+ + A LS SFGFGG N++++
Sbjct: 358 SIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALL 417
Query: 429 FSPY 432
F+ Y
Sbjct: 418 FTKY 421
|
Length = 421 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-124
Identities = 183/444 (41%), Positives = 262/444 (59%), Gaps = 40/444 (9%)
Query: 17 PHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI-------ETFDCT------- 62
P + +RVVVTG+GLV+PLG + + L+ G G+ + ++ D
Sbjct: 1 PPLPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLD 60
Query: 63 SFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADG--GITEDVM 114
P+++AA + F + W+ S+ +F+ Y L A +AL+D +ED
Sbjct: 61 QLPSRVAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDE- 116
Query: 115 NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYK--KMNPFCVPFATTNMGSAMLAMDLG 172
K + GV IG G+G + +A L + +++PF VP NM + +++ G
Sbjct: 117 ---AKERTGVSIGGGIGSITDILEA-AQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172
Query: 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 232
+ GPN++ TACAT I +A I G+A+VM+ GG+++++ + + GF RALS +
Sbjct: 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTK 232
Query: 233 NND-PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT 291
N PT+ASRP+D +RDGFV+GEGAGVL+LEELEHAK+RGAKIYAE RG + DA+H+T
Sbjct: 233 FNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHIT 292
Query: 292 EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR---G 348
+PH DG G +L + +AL SG+ V+Y+NAHATSTP GD E +A+ F ++ G
Sbjct: 293 QPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGG 352
Query: 349 LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV--LVGPKKE 406
L +STK GHLLGAAGAVEAI V AI G P +NLE PD + D L K
Sbjct: 353 LAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAM 412
Query: 407 RLEVKAALSNSFGFGGHNSSIIFS 430
++AALSNSFGFGG N+S++F+
Sbjct: 413 L--IRAALSNSFGFGGTNASLLFT 434
|
Length = 437 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-123
Identities = 187/414 (45%), Positives = 273/414 (65%), Gaps = 6/414 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F+ +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+++ K +++MD F+ Y + AG +AL D G+ + E + + GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---VTEENAHRIGVAIGSGIGGLGLIEA 117
Query: 139 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+G+GAG
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 MMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375
+ Y+NAH TSTPAGD+ E + + G+ ++ + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 IGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
++ + P INL++P+ +D +++ ++ ++ A+ NSFGFGG N S+IF
Sbjct: 358 SLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIF 411
|
Length = 414 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 361 bits (929), Expect = e-122
Identities = 181/416 (43%), Positives = 246/416 (59%), Gaps = 20/416 (4%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
KRVVVTG+G+++ LG + + + G GI +I FD + FP +IA EI F +
Sbjct: 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
PK K+ D+F+ L A ++A+ D G + ELD + GV SG+GG+ IE
Sbjct: 62 DPKEVKKADRFIQLGLKAAREAMKDAGFLPE---ELDAERFGVSSASGIGGLP----NIE 114
Query: 142 ALRISY-----KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 196
I +K++PF +P A NM ++++ G GPN S TACA I+ A
Sbjct: 115 KNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVK 174
Query: 197 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256
I+ G A+ ML G+++A+ P+G+GGF A +ALS RN+DP KASRP+D +RDGFVMGEGA
Sbjct: 175 TIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234
Query: 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
G L+LEE E AKKRGAKIYAE G + DA H+T P P+ G + ++ AL +G +
Sbjct: 235 GALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPE--GPLRAMKAALEMAGNPK- 291
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGL-RVNSTKSMIGHLLGAAGAVEAIAVVQ 375
++YINAH TSTP D E AL FG + V+STK IGH LGAAGA+EA+ +
Sbjct: 292 -IDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIM 350
Query: 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKER-LEVKAALSNSFGFGGHNSSIIFS 430
A+R G + P IN E PD D + + P R E+ +SNSFGFGG N +IF
Sbjct: 351 AMRDGILPPTINQETPDPECDLDYI--PNVARKAELNVVMSNSFGFGGTNGVVIFK 404
|
Length = 406 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 286 bits (735), Expect = 2e-93
Identities = 162/421 (38%), Positives = 232/421 (55%), Gaps = 26/421 (6%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVV+TG+G+VS +G+ +L EG SGI+ F +++ +K G +
Sbjct: 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLI 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITED-VMNELDKSKCGVLIGSGLGGMKVFYDAI 140
K+ + M Y A ++A+AD G++E+ V N + G++ GSG G + +A
Sbjct: 61 DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNP----RTGLIAGSGGGSTRNQVEAA 116
Query: 141 EALRI--SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 198
+A+R K++ P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 117 DAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQI 176
Query: 199 IRGEANVMLCGGSD-----AAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRDGFVM 252
G+ +++ GG + + + F A ALS + ND P KASR +D NRDGFV+
Sbjct: 177 QLGKQDIVFAGGGEELDWEMSCL------FDAMGALSTKYNDTPEKASRAYDANRDGFVI 230
Query: 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 312
G GV+++EELEHA RGAKIYAE G TSD Y M P G G + C++ ALA
Sbjct: 231 AGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVA--PSGEGAVRCMQMALA--T 286
Query: 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIA 372
V ++YIN H TSTP GD+KE A+ FG +++TKS+ GH LGAAG EAI
Sbjct: 287 V-DTPIDYINTHGTSTPVGDVKELGAIREVFGDKSP-AISATKSLTGHSLGAAGVQEAIY 344
Query: 373 VVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432
+ + G+I P+ N+E D +V + E+ +SNSFGFGG N++++F Y
Sbjct: 345 SLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404
Query: 433 K 433
K
Sbjct: 405 K 405
|
Length = 406 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 2e-90
Identities = 160/434 (36%), Positives = 213/434 (49%), Gaps = 24/434 (5%)
Query: 13 TKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEI 72
T + H+ + V VTGMG+V+ LG + L G SGI I F T+IA +
Sbjct: 2 TAYRDHLGRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV 61
Query: 73 KSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMN----------ELDKSKC 122
+ A LS+ + + A ++ALA GI + EL+
Sbjct: 62 DFLPESPFGASALSEALAR------LAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPAR 115
Query: 123 GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS--AMLAMDLGWMGPNYSI 180
L + YD + LR + + F GS LA G G S+
Sbjct: 116 FALAAAVGDNDAPSYDRL--LRAA--RGGRFDALHERFQFGSIADRLADRFGTRGLPISL 171
Query: 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240
STACA+ I I RGE + LC +D +V L F ALS +N+ P KAS
Sbjct: 172 STACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
+P+ +RDGFVM EGAG L+LE LE A RGAKI G +D++H T PDG
Sbjct: 232 KPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPA 291
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIG 359
I I ALA +G++ E ++YINAH TSTP D EY L FG+ + V+S KSMIG
Sbjct: 292 IGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIG 351
Query: 360 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419
H L AAGAVEA+ + I+TG + P IN +NPD + +V V V A LSNSFG
Sbjct: 352 HTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDV-VPNVARDARVTAVLSNSFG 410
Query: 420 FGGHNSSIIFSPYK 433
FGG N+S++ +
Sbjct: 411 FGGQNASLVLTAEP 424
|
Length = 425 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 3e-88
Identities = 141/417 (33%), Positives = 222/417 (53%), Gaps = 20/417 (4%)
Query: 24 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGI-----SEIETFDCTSFPTKIAAEIKSFSTD 78
VVVTG+ + + L + + + LL+G SGI +E FD P +I + D
Sbjct: 14 VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFD---LPVRIGGHLLE-EFD 69
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ +RM G++ + G E +D ++ V IG+GLG +
Sbjct: 70 HQLTRVELRRMSYLQRMSTVLGRRVWENAGSPE-----VDTNRLMVSIGTGLGSAEELVF 124
Query: 139 AIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
A + +R + ++P V N +A + ++ + +ACA+ + I A
Sbjct: 125 AYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQ 184
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRA-LSQRNNDPTKASRPWDINRDGFVMGEGA 256
I+ GEA++ +CGG + + + + GF R +S N+DP A RP+D +RDGFV GEG
Sbjct: 185 IVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGG 244
Query: 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
++++E EHAK RGA I A G S TSD +HM P P+G + +A+ +G++
Sbjct: 245 ALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPG 304
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
D++++NAHAT T GD+ E +A+ + G +R V + KS +GH +GA GAVE+I V A
Sbjct: 305 DIDHVNAHATGTSVGDVAEGKAINNALGGHRP-AVYAPKSALGHSVGAVGAVESILTVLA 363
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVG-PKKERLEVKAALSNSFGFGGHNSSIIFSPY 432
+R G I P +NLEN D +D +V+ G P+ + A++NSFGFGGHN ++ F Y
Sbjct: 364 LRDGVIPPTLNLENLDPEIDLDVVAGEPRPG--NYRYAINNSFGFGGHNVALAFGRY 418
|
Length = 418 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 7e-80
Identities = 152/414 (36%), Positives = 230/414 (55%), Gaps = 19/414 (4%)
Query: 23 RVVVTGMGLVSPLG---HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 79
RVV+TG+G+VSP G E + F+ L EG SGI+ + + F +A +I + G
Sbjct: 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGDIPG 60
Query: 80 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 139
W A + + +D+ L L A ++ALAD GIT+ E+ S+ GV++GSG+GG++
Sbjct: 61 WDAKR-TGIVDRTTLLALVATEEALADAGITDP--YEVHPSEVGVVVGSGMGGLRFLRRG 117
Query: 140 IEALRISYKKMNPFCVP--FATTNMGSAMLAMDL-GWMGPNYSISTACATSNFCILNAAN 196
+ + +NP+ P + N + + + L GP + ACAT+ + A
Sbjct: 118 GKLD---ARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVE 174
Query: 197 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256
I G+A++++ GG + + GL GF ALS +P + SRP+D RDGFV EGA
Sbjct: 175 AIRSGKADIVVVGGVED-PLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGA 233
Query: 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
GVL+LE E A RGA IY G + T+D + P G G+ I ALA +G+S +
Sbjct: 234 GVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP-AGGKGIARAIRTALAKAGLSLD 292
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRG--LRVNSTKSMIGHLLGAAGAVEAIAVV 374
D++ I+AH TSTPA D+ E +A I G L V + K++ GH GAAGA++ I +
Sbjct: 293 DLDVISAHGTSTPANDVAESRA-IAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGAL 351
Query: 375 QAIRTGWIHPNINLENPDAVVDTNVLVG-PKKERLEVKAALSNSFGFGGHNSSI 427
Q++ G I P NL++ D V+ +VG + L+V+AAL N+FGFGG N+++
Sbjct: 352 QSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAAL 405
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 1e-78
Identities = 152/431 (35%), Positives = 212/431 (49%), Gaps = 51/431 (11%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC-TSFPTKIAAEIKSFSTDGW 80
+RVVVTGMG V+ LG + L G + + + +D T++AA I F
Sbjct: 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61
Query: 81 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 140
K + M + L A + AL D G+ D + L + G+ GS G D I
Sbjct: 62 YTRKKIRSMGRVSLMATRASELALEDAGLLGDPI--LTDGRMGIAYGSSTGST----DPI 115
Query: 141 EAL-------------RISYKKMNPFCVPFATT--NMGSAMLAMDLGWMGPNYSISTACA 185
A +Y +M P TT N+G + G G S+AC
Sbjct: 116 GAFGTMLLEGSMSGITATTYVRMMPH-----TTAVNVG-----LFFGLKGRVIPTSSACT 165
Query: 186 TSNFCILNAANHIIRGEANVMLCGG------SDAAVIPIGLGGFVACRALSQRNNDPTKA 239
+ + I A I G VML GG ++AAV F A S RN+ P
Sbjct: 166 SGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAV-------FDTLFATSTRNDAPELT 218
Query: 240 SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVG 299
RP+D NRDG V+GEGAG L+LEELEHAK RGA IYAE G SD H+T+P + +
Sbjct: 219 PRPFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQ 278
Query: 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIG 359
+ +E AL +G++ ED+ Y+NAH T+T GDI E QA FG + ++S KS G
Sbjct: 279 --IAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGAR--MPISSLKSYFG 334
Query: 360 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSF 418
H LGA GA+EA ++ + GW P +NL D A + ++G +E ++ + +SN+F
Sbjct: 335 HTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEARE-IDTEYVMSNNF 393
Query: 419 GFGGHNSSIIF 429
FGG N+S+IF
Sbjct: 394 AFGGINTSLIF 404
|
Length = 405 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 3e-75
Identities = 135/317 (42%), Positives = 187/317 (58%), Gaps = 2/317 (0%)
Query: 115 NELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGW 173
N + + +IG+G+GG A+ K+++PF VP N+ + +++ +
Sbjct: 21 NTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF 80
Query: 174 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR- 232
GP + TACA I +A I EA+V LCGG++A + + L GF A RALS
Sbjct: 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHF 140
Query: 233 NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE 292
N+ P KASRP+D RDGFVMGEGAG+L++EELEHA RGAK AE G ++DAYHMT
Sbjct: 141 NSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTS 200
Query: 293 PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVN 352
DG G ++ AL +G++ E V ++NAHATSTP GD+ E A+ H FG++ L +
Sbjct: 201 GAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNALAIT 260
Query: 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412
STKS GHLLGAAG +E I V A+R + +NLENPD ++ + ++
Sbjct: 261 STKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTY 320
Query: 413 ALSNSFGFGGHNSSIIF 429
ALSN FGF G N+SI+
Sbjct: 321 ALSNGFGFAGVNASILL 337
|
Length = 342 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 1e-68
Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 31/421 (7%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGI--------SEIETFDCTSFPTKIAAEIK 73
VVVTG+G+VS +G F LL G + I AE+
Sbjct: 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELD 61
Query: 74 SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 133
S + + KL +R L A ++A D + +D + G+++G G
Sbjct: 62 SLALPERLDAKLLRRASLSAQAALAAAREAWRDAA-----LGPVDPDRIGLVVG----GS 112
Query: 134 KVFYDAIEALRISYKKMNPFCVP-FATTNMGS---AMLAMDLGWMGPNYSISTACATSNF 189
+ + +Y+ F P + + M + + + G G +++ A A+
Sbjct: 113 NLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQL 172
Query: 190 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRAL-SQRN-NDPTKASRPWDINR 247
++ AA + G + + G+ + + A+ S R ++P A RP+D +R
Sbjct: 173 AVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR 232
Query: 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKA 307
DGF+ GE G ++LE E A++RGA+ YA+ G S DA P P G + I A
Sbjct: 233 DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAA 290
Query: 308 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGA 367
L +G+ ED++Y+N H T +P GD E AL +N+TKS+ GH L AAG
Sbjct: 291 LRRAGLGPEDIDYVNPHGTGSPLGDETELAALFAS--GLAHAWINATKSLTGHGLSAAGI 348
Query: 368 VEAIAVVQAIRTGWIHPNINLENPDAVVDTNV-LVGPKKERLEVKAALSNSFGFGGHNSS 426
VE IA + +R G++HP+ NL+ P +D VG E ++ ALS SFGFGG N++
Sbjct: 349 VELIATLLQMRAGFLHPSRNLDEP---IDERFRWVGSTAESARIRYALSLSFGFGGINTA 405
Query: 427 I 427
+
Sbjct: 406 L 406
|
Length = 410 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 3e-65
Identities = 129/435 (29%), Positives = 199/435 (45%), Gaps = 45/435 (10%)
Query: 23 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI--ETFDCTSFPTKIAAEIKSFSTDGW 80
+ + GM P +PD F+ NLLEG ISEI + +D + K+++ G
Sbjct: 2 PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG 61
Query: 81 --------------VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLI 126
++P+ ++ MD LL +AL D G + L S+ GV +
Sbjct: 62 FLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYS---PESLAGSRTGVFV 118
Query: 127 GSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACAT 186
G+ D +E L +++ + + + ++ GP+ ++ TAC++
Sbjct: 119 GAS------SSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSS 172
Query: 187 SNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246
S + A + GE ++ L GG + + P GF LS P RP+D +
Sbjct: 173 SLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPFDAD 227
Query: 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY--HMTEPHPDGVGVILCI 304
DG+V GEG GV++L+ L A + G +IYA RG + D +T P + I
Sbjct: 228 ADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQ--AALI 285
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG----LRVNSTKSMIGH 360
+A A +GV D++Y+ AH T TP GD E +AL FG +R L + S KS IGH
Sbjct: 286 RRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGH 345
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPKKERLEVKAA 413
L AAG I VV A+ G I PN++ E P+ +D + + V P + A
Sbjct: 346 LEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRA 405
Query: 414 LSNSFGFGGHNSSII 428
+SFGFGG N+ +I
Sbjct: 406 GVSSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 201 bits (514), Expect = 2e-62
Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 20/254 (7%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF--PTKIAAEIKSFSTDG 79
+ V +TGMG P G P+ F+ LL G I E D + P+++A EI F D
Sbjct: 2 EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA-DLSGLYPPSRVAGEIYGFDFDA 60
Query: 80 W---VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF 136
++P+ ++ MD L A +AL D G+ + D+ GV +GSG G
Sbjct: 61 AFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDR--TGVFVGSGSG----D 114
Query: 137 YDAIEALRI--SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNA 194
Y ++AL ++++P+ ++ + ++ LG GP+ ++ TAC++S L+A
Sbjct: 115 YAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSS-LVALHA 173
Query: 195 A-NHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 253
A I RGE ++ L GG +A + P G GF A AL + P KA P+ DGFV G
Sbjct: 174 AVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSP-DGPCKAFDPFA---DGFVRG 229
Query: 254 EGAGVLLLEELEHA 267
EG G +LL+EL A
Sbjct: 230 EGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 3e-59
Identities = 134/417 (32%), Positives = 193/417 (46%), Gaps = 48/417 (11%)
Query: 23 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVA 82
+VVVTG+GLVS LG + LL+G SGI + F P I + +
Sbjct: 3 KVVVTGIGLVSALGDLEQS-WQRLLQGKSGIKLHQPF--PELPPLPLGLIGNQPSS---L 56
Query: 83 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI-- 140
L+K T AL D G+T + CGV+IGS G
Sbjct: 57 EDLTK----------TVVTAALKDAGLT------PPLTDCGVVIGSSRG-----CQGQWE 95
Query: 141 EALRISYKKMNPFCVPFATTN-------MGSAMLAMDLGWMGPNYSISTACATSNFCILN 193
+ R Y+ + N + A +G GP + ACAT + I
Sbjct: 96 KLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQ 155
Query: 194 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 253
I G+ ++ G +A + P+ L GF AL+ T A P+D R+G V+G
Sbjct: 156 GVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALA-----KTGAY-PFDRQREGLVLG 209
Query: 254 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 313
EG +L+LE E A+KRGAKIY + G T DAYHM+ P PDG I I++ LA SG+
Sbjct: 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGL 269
Query: 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAV 373
+ ED++YI+AH T+T D +E + F V+STK GH LGA+GA+
Sbjct: 270 TPEDIDYIHAHGTATRLNDQREANLIQALFPHRVA--VSSTKGATGHTLGASGALGVAFS 327
Query: 374 VQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
+ A+R + P + L+ P+ D N + + + ++ L SFGFGG N++I
Sbjct: 328 LLALRHQQLPPCVGLQEPE--FDLNFVRQAQ--QSPLQNVLCLSFGFGGQNAAIALG 380
|
Length = 381 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 4e-57
Identities = 111/317 (35%), Positives = 157/317 (49%), Gaps = 34/317 (10%)
Query: 123 GVLIG---SGLG----GMKVFYDAIEAL--RISYKKMNPFCVPFATTNMGSAMLAMDLGW 173
GV++G SG+ + A AL Y + + + L LG
Sbjct: 98 GVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSL--------ADFLRAYLGL 149
Query: 174 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRN 233
GP Y+ISTAC++S +A + G + + GG D+ + + L GF + +LS
Sbjct: 150 SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS--- 205
Query: 234 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 293
P RP+ NRDG +GE A LLE R G +SDA+HM+ P
Sbjct: 206 PQPC---RPFSANRDGINIGEAAAFFLLE-------REDDAAVALLGVGESSDAHHMSAP 255
Query: 294 HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNS 353
HP+G+G IL +++ALA +G++ D+ YIN H T+TP D E +A+ FG G+ +S
Sbjct: 256 HPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD--GVPCSS 313
Query: 354 TKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAA 413
TK + GH LGAAGAVEA A+R G N PD + LV + L ++
Sbjct: 314 TKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVEN-AQALAIRYV 372
Query: 414 LSNSFGFGGHNSSIIFS 430
LSNSF FGG+N S+IF
Sbjct: 373 LSNSFAFGGNNCSLIFG 389
|
Length = 392 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 1e-51
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 16/337 (4%)
Query: 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMN 151
+ A ++A+AD G++ E K+ ++ GG + + +
Sbjct: 11 VSILGFEAAERAIADAGLSR----EYQKNPIVGVVVGTGGG---SPRFQVFGADAMRAVG 63
Query: 152 PFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGS 211
P+ V A S +A LG GP Y +S ACA S + AA+ + G+ +++L GGS
Sbjct: 64 PYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGS 123
Query: 212 DAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRG 271
+ P+ + P KASR +D DGFV G+GAG L++EELEHA RG
Sbjct: 124 EELAAPMDCEFDAMGALST-----PEKASRTFDAAADGFVFGDGAGALVVEELEHALARG 178
Query: 272 AKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG 331
A IYAE G + T D M P G+ ++ALA +G++ D++Y+ AH T TP G
Sbjct: 179 AHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238
Query: 332 DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391
D+KE + L FG V++TK+M G+L AA + V + G+I P+I++E
Sbjct: 239 DVKELKLLRSEFGDKS-PAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEEL 297
Query: 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
D + + E++ AL N FG GG N++++
Sbjct: 298 DEAGL---NIVTETTPRELRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 5e-48
Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 23/414 (5%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+R VVTG+G+V+P G + ++ +L+G SG+ I FD + +P ++A E+ F +
Sbjct: 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHL 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
+L + D+ L A ALAD G+ + D GV+ S GG + ++
Sbjct: 61 PGRLLPQTDRMTRLALAAADWALADAGVDPAALPPYD---MGVVTASAAGGFEFGQRELQ 117
Query: 142 ALRISYKKMNPFCVP------FATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAA 195
L + K F N G +++ G GP+ + A + A
Sbjct: 118 KL---WSKGPRHVSAYQSFAWFYAVNTGQ--ISIRHGMRGPSGVVVAEQAGGLDALAQAR 172
Query: 196 NHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 255
+ RG +++ GG D+A+ P G ++ LS ++DP +A P+D G+V GEG
Sbjct: 173 RLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLS-TSDDPARAYLPFDAAAAGYVPGEG 230
Query: 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD-GVGVILCIEKALAHSGVS 314
+L+LE+ A++RGA++Y E G + T D P G+ I ALA +G++
Sbjct: 231 GAILVLEDAAAARERGARVYGEIAGYAATFDP----PPGSGRPPGLARAIRLALADAGLT 286
Query: 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374
EDV+ + A A P D E AL FG RG+ V + K+M G L ++ +
Sbjct: 287 PEDVDVVFADAAGVPELDRAEAAALAAVFGP-RGVPVTAPKTMTGRLYAGGAPLDVATAL 345
Query: 375 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
A+R G I P +N+ + +++ G + ++ AL + G GG NS+++
Sbjct: 346 LALRDGVIPPTVNVTDVPPAYGLDLVTGRPRP-AALRTALVLARGRGGFNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-41
Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 275 YAEFRGGSFTSD-AYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333
YA RG + D A H P+G I ALA +G+ EDV+Y+ AH T TP GD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 334 KEYQALIHCFGQNRG---LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389
E +AL FG R L V S KS IGHL AAG I V A+R G I P +NL+
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-39
Identities = 120/438 (27%), Positives = 195/438 (44%), Gaps = 45/438 (10%)
Query: 24 VVVTGMGLVSPLGHE-PDVFYNNLLEGVSGISEI--ETFDCTSF-------PTKIAAEIK 73
+ + GM P G + P+ F++ L EG I+E+ + +D ++ P K +
Sbjct: 6 IAIIGMACRFP-GADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWG 64
Query: 74 SFSTD---------GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 124
F D G ++P+ ++ MD LL +AL D GI D L S GV
Sbjct: 65 GFLDDVDDFDALFFG-ISPREAEAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGV 120
Query: 125 LIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 184
G+ + + + + ++++ + ++ LG GP+ ++ TAC
Sbjct: 121 FAGASVAD--YLLLLLADDEAE----PEYAITGNSSSVAAGRISYVLGLSGPSVTVDTAC 174
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 244
++S + A + GE ++ L GG + + P F A LS P + +D
Sbjct: 175 SSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFD 229
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
+ DG+V GEGAGV++L+ L A++ G +IYA RG + D P+ I
Sbjct: 230 ADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVI 289
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG---LRVNSTKSMIGHL 361
+ALA +G+ V Y+ AH T TP GD E AL +G+ + S KS IGHL
Sbjct: 290 REALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHL 349
Query: 362 LGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPKKERLEVKAAL 414
AAG I A++ G+I P ++ + P+ +D + +V P + A
Sbjct: 350 EAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAG 409
Query: 415 SNSFGFGGHNSSIIFSPY 432
+SFGFGG N+ +I
Sbjct: 410 VSSFGFGGTNAHVILEEA 427
|
Length = 1061 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 4e-31
Identities = 81/304 (26%), Positives = 117/304 (38%), Gaps = 68/304 (22%)
Query: 132 GMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM------LAMDLGWM-GPNYSISTAC 184
G + AI +S + V TT LA LG GP YS++ AC
Sbjct: 11 GFEAAEQAIADAGLSKGPIVGVIV--GTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQAC 68
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 244
AT + A + G+A+++L GGS+
Sbjct: 69 ATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------- 97
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
FV G+GA ++E EHA +RGA AE + T D M P G G+
Sbjct: 98 -----FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM-VPAVSGEGLARAA 151
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGA 364
KAL +G++ D++Y+ AH T TP GD E + G R V++T M GH LGA
Sbjct: 152 RKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV-RSPAVSATLIMTGHPLGA 210
Query: 365 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHN 424
AG ++ + +I P E + L FG GG N
Sbjct: 211 AGLAILDELLLMLEHEFIPPT---------------------PREPRTVLLLGFGLGGTN 249
Query: 425 SSII 428
++++
Sbjct: 250 AAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-25
Identities = 108/395 (27%), Positives = 168/395 (42%), Gaps = 59/395 (14%)
Query: 83 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK-------- 134
P + + D L L K+ L D G+ + D+ K G+ +G G GG K
Sbjct: 84 PNILELTDISQLLSLVVAKEVLNDAGLPDG----YDRDKIGITLGVG-GGQKQSSSLNAR 138
Query: 135 --------VFYDA----------IEALRISYKKMNPFCVPFATTNMGSAMLA--MDLGWM 174
VF + I+ + Y P + N+ S +A DLG
Sbjct: 139 LQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLG-- 196
Query: 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNN 234
G N + ACA S I A + ++ G + +M+ GG P F A +
Sbjct: 197 GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTT--- 253
Query: 235 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT--E 292
+ +P+DI+ G ++GEG G++ L+ LE A++ G +IYA +G +SD +
Sbjct: 254 --NEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYA 311
Query: 293 PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN----RG 348
P P+G L ++A +G + I AH T T AGD+ E+ L+ F Q+ +
Sbjct: 312 PRPEGQAKAL--KRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQH 369
Query: 349 LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT-------NVLV 401
+ + S KS IGH AG I V A+ + P IN++ P+ +D N
Sbjct: 370 IALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTET 429
Query: 402 GPKKER---LEVKAALSNSFGFGGHNSSIIFSPYK 433
P +R +A +S SFGFGG N ++ Y
Sbjct: 430 RPWMQREDGTPRRAGIS-SFGFGGTNFHMVLEEYS 463
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 93.9 bits (235), Expect = 1e-21
Identities = 74/264 (28%), Positives = 108/264 (40%), Gaps = 62/264 (23%)
Query: 174 MGPNYSIS--TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ 231
+YS++ TAC++S + A + GE ++ L GG + + P G LS
Sbjct: 85 SSSDYSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS- 143
Query: 232 RNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT 291
P + +D + DG+V GEG GV++L+ L A + G I
Sbjct: 144 ----PDGRCKTFDASADGYVRGEGVGVVVLKRLSDALRDGDPIL---------------- 183
Query: 292 EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRV 351
VI A+ G S N I A P+G Q L +
Sbjct: 184 -------AVIR--GSAVNQDGRS----NGITA-----PSGP-----------AQ---LLI 211
Query: 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPK 404
S KS IGHL AAG I VV A++ G I P ++ E P+ +D + + V P
Sbjct: 212 GSVKSNIGHLEAAAGVAGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTELTPW 271
Query: 405 KERLEVKAALSNSFGFGGHNSSII 428
+ A +SFGFGG N+ +I
Sbjct: 272 PPPGRPRRAGVSSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 48/322 (14%), Positives = 87/322 (27%), Gaps = 106/322 (32%)
Query: 84 KLSKRMDK-FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEA 142
+R D+ + A + AL D G+ I+A
Sbjct: 7 PFGRRSDRSPLELAAEAARAALDDAGLE--------------------------PADIDA 40
Query: 143 LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGE 202
+ + + G+ + P + A A+ + + AA I G
Sbjct: 41 VVVGN-----AAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGL 95
Query: 203 ANVMLCGGSDA--------------------------AVIPIGLGGFVACR--------- 227
A+V+L G++ + P L A R
Sbjct: 96 ADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTR 155
Query: 228 ------ALSQRNN---------------DPTKASRP-------WDINRDGFVMGEGAGVL 259
A+ N + SR D + +GA +
Sbjct: 156 EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCC----PVSDGAAAV 211
Query: 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV--GVILCIEKALAHSGVSRED 317
+L E A++ + G SD ++E L +A +G++ +D
Sbjct: 212 VLASEERARELTDR-PVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDD 270
Query: 318 VNYINAHATSTPAGDIKEYQAL 339
++ + T I E AL
Sbjct: 271 IDVAELYDCFT----IAELLAL 288
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 193 NAANHIIRGEANVMLCGGSDAA-----VIPIGLGGFVA---CRALSQRNNDPTKASRPWD 244
A I G+++ L GG+ A ++ LGG + + R +
Sbjct: 184 IAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGEDG------- 236
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 277
GF++G G L+LE EHA+ RGA+ YA
Sbjct: 237 ---GGFILGSGGAFLVLESREHAEARGARPYAR 266
|
Length = 398 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSD-AAVIPIGL 220
YS+S ACATS + N A I+ G ++ + GG+D ++V+PIG+
Sbjct: 85 YSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGV 128
|
Length = 428 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 0.003
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVS 314
GA +LL E AK+ G K A G + +P G+G + I KAL +G++
Sbjct: 247 GAAAVLLMSEEKAKELGLKPLARIVGYAVAGV-----DPAIMGIGPVPAIPKALKRAGLT 301
Query: 315 REDVNYI 321
+D++ I
Sbjct: 302 LDDIDLI 308
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 311
+GAG ++L + K+ A F SF P G+G I I AL +
Sbjct: 256 TSDGAGAVILVSEKALKQFNLTPLARFV--SFAVAG---VPPEIMGIGPIEAIPAALKQA 310
Query: 312 GVSREDVNYIN---AHATSTPAGDIKEYQAL--IHCFGQNRGLRVNSTKSMI--GHLLGA 364
G+ ++D+++I A A Q+L I G + +VN I GH LGA
Sbjct: 311 GLKQDDLDWIELNEAFAA----------QSLAVIRDLGLDPS-KVNPLGGAIALGHPLGA 359
Query: 365 AGAVEAIAVVQAIR 378
GA+ VV +R
Sbjct: 360 TGAIRTATVVHGLR 373
|
Length = 399 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 433 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.95 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.95 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.95 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.95 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.94 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.94 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.94 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.93 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.93 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.93 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.93 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.93 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.93 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.92 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.92 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.92 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06158 | 384 | thiolase; Provisional | 99.92 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.92 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.92 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.91 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.9 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.89 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.87 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.85 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.85 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.84 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.84 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.83 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.82 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.81 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.8 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.8 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.79 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.78 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.77 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.76 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.75 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.73 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.71 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.71 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.7 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.67 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.67 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.65 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.63 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.6 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.59 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.59 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.58 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.55 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.54 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.53 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.49 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.47 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.46 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.43 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.41 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.41 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.37 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.31 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.25 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.25 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.23 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.23 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.16 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.13 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.03 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.89 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.86 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.8 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.52 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.44 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.15 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.96 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.38 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 90.38 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 89.47 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 88.69 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 88.63 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 88.45 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 88.16 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 87.71 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 86.93 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 86.8 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 86.79 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 86.73 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 86.7 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 86.64 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 85.95 | |
| PRK06158 | 384 | thiolase; Provisional | 85.93 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 85.91 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 85.82 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 85.74 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 85.61 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 84.88 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 84.66 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 84.22 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 83.18 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 83.01 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 82.4 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 82.02 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 81.98 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 81.13 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 80.78 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 80.49 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 80.48 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 80.47 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 80.21 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-92 Score=636.00 Aligned_cols=413 Identities=52% Similarity=0.829 Sum_probs=391.2
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
++||||||||+++|+|.++.++|++|.+|+++|+.++.++...+|..+++.|+.|+...|++....++|++..+|++.++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence 78999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
++||+|+++.+..+++.+..++||.+|+.++++..+.+....+ ..++++++|+.+|..+.|+.++++++.+|++||+.+
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs 182 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS 182 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence 9999999999876778889999999999999998887766666 456999999999999999999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++++|++|..+|..|.+.|+.|++|++|+||.|..+.|..+.+|.+.+.|++++++|..++||||.+||||++|||++++
T Consensus 183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagvl 262 (440)
T KOG1394|consen 183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGVL 262 (440)
T ss_pred hHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHH
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 339 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al 339 (433)
|||++|+|++||++||++++|++.++|.+|++.|+|++.+...||++||++|||+|+|||||++|+|+|+.+|..|.+||
T Consensus 263 vlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai 342 (440)
T KOG1394|consen 263 VLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAI 342 (440)
T ss_pred ehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCc-ccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC--Ccc-cccCccEEEE
Q 013946 340 IHCFGQNRGL-RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG--PKK-ERLEVKAALS 415 (433)
Q Consensus 340 ~~~~~~~~~~-~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~l~ 415 (433)
+++|++.... +|+|.|+.+||.+||+|.++.+..+++++++++||++|+++|++..+.++++. .+. ....+|++++
T Consensus 343 ~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~~~~~vals 422 (440)
T KOG1394|consen 343 KRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGGNKVRVALS 422 (440)
T ss_pred HHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccccccccccccccccccccceEEEe
Confidence 9999987533 79999999999999999999999999999999999999999999888875332 222 2245889999
Q ss_pred ecccccceeeeeEEccCC
Q 013946 416 NSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~~ 433 (433)
|||||||+|+++++.+|+
T Consensus 423 NSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 423 NSFGFGGTNASLCFAKFK 440 (440)
T ss_pred cccccCCcchhheeeecC
Confidence 999999999999999985
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-88 Score=678.23 Aligned_cols=433 Identities=89% Similarity=1.396 Sum_probs=402.5
Q ss_pred CccccCCCcccccCCCCCCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCC
Q 013946 1 MAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 80 (433)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (433)
|+|+.||......++++.++.++|||||||+++|.|.+.++||++|.+|+++++++++|+...++.++++++++|+++.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~ 187 (540)
T PLN02787 108 MAVAVQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGW 187 (540)
T ss_pred ceeccCcccccccccCCCCCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhc
Confidence 56777777655555555555689999999999999999999999999999999999999988899999999999998888
Q ss_pred CChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCccccccc
Q 013946 81 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT 160 (433)
Q Consensus 81 i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (433)
+++++.++||+++++++.++++||+|||++++.++.+++.|+||++|++.+++..++++++.+....+.++|+.++....
T Consensus 188 l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 267 (540)
T PLN02787 188 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATT 267 (540)
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcc
Confidence 99999999999999999999999999999865444567889999999999999888888777766677888998888889
Q ss_pred chHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCC
Q 013946 161 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240 (433)
Q Consensus 161 ~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 240 (433)
|..+.++++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+.|..+.+|..++.|+..+.+|+..|
T Consensus 268 n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~ 347 (540)
T PLN02787 268 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKAS 347 (540)
T ss_pred cHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999899999999999999998888889999
Q ss_pred ccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 013946 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320 (433)
Q Consensus 241 ~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~ 320 (433)
||||.+++|+++|||++++|||++++|++||++||++|+|++.++|+++++.|.|++.++.++|++||+++|++|+||||
T Consensus 348 rPFD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdy 427 (540)
T PLN02787 348 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNY 427 (540)
T ss_pred CCcccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 321 INAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 321 v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
|++|||||+.+|..|.++|+++|+....++|+|+|+++||++||+|++++++++++|++|+|||++|+++|++.++++++
T Consensus 428 InaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~ 507 (540)
T PLN02787 428 INAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVL 507 (540)
T ss_pred EEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccc
Confidence 99999999999999999999999976568999999999999999999999999999999999999999999999998876
Q ss_pred cCCcccccCccEEEEecccccceeeeeEEccCC
Q 013946 401 VGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 401 ~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
+..+.++++++++|+|||||||+|+++||++|+
T Consensus 508 v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~~ 540 (540)
T PLN02787 508 VGPKKERLDIKVALSNSFGFGGHNSSILFAPYK 540 (540)
T ss_pred cccccccCCcCEEEEeeecCCceeEEEEEEeCC
Confidence 655566677999999999999999999999985
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=627.29 Aligned_cols=409 Identities=45% Similarity=0.773 Sum_probs=379.9
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
..++|+|||||+++|.|.+.++||++|.+|+++++++++|+...++..+++.+++|+++.|+++++.++|++++++++.+
T Consensus 2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a 81 (414)
T PRK08722 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAA 81 (414)
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHH
Confidence 34799999999999999999999999999999999999998888888899999999988889999999999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
+++||+|||++++ ..+..|+||++|++.+++...+++++.+ ..+.+.++|+.++..+.|.+++++++.||++||++
T Consensus 82 ~~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~ 158 (414)
T PRK08722 82 GIQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNI 158 (414)
T ss_pred HHHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCcc
Confidence 9999999999764 4567899999999999998887777665 34556788889999999999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
+|+++|+|++.||..|+++|++|++|++||||+|...++..+.+|..++.++..+.+|+..|||||.+++|+++|||+++
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaa 238 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGM 238 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEE
Confidence 99999999999999999999999999999999999889999999999999987777788999999999999999999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHH
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 338 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~a 338 (433)
+|||++++|+++|+++|++|+|++.++|+.+.+.|.+++.+..++|++||+++||+|+||||||+|||||+.+|..|.++
T Consensus 239 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~a 318 (414)
T PRK08722 239 MVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKG 318 (414)
T ss_pred EEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHH
Confidence 99999999999999999999999999999999889888888999999999999999999999999999999999999999
Q ss_pred HHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCccccc-CccEEEE
Q 013946 339 LIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL-EVKAALS 415 (433)
Q Consensus 339 l~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 415 (433)
|+++|+.. .+++|+++|+++||+++|||++++++++++|++|+|||++|+++|+|.++++++.. +.+.+ .+|++++
T Consensus 319 l~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~-~~~~~~~~~~~l~ 397 (414)
T PRK08722 319 IKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPH-TARKVESMEYAIC 397 (414)
T ss_pred HHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC-ccccCCCCCEEEE
Confidence 99999864 46899999999999999999999999999999999999999999999998887543 33333 5899999
Q ss_pred ecccccceeeeeEEccC
Q 013946 416 NSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~ 432 (433)
|||||||+|+|+||++.
T Consensus 398 nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 398 NSFGFGGTNGSLIFKKM 414 (414)
T ss_pred ecccCCCceEEEEEecC
Confidence 99999999999999873
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-81 Score=604.90 Aligned_cols=407 Identities=50% Similarity=0.788 Sum_probs=375.2
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+++|||||+|+++|.|.+.+++|++|..|++++..++.|+...++.++.+++++| ..++.+++.++|++.++|++.++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa 79 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA 79 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999988 45567888889999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-Hhhccc-CCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKK-MNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
.+||+|||++.+ ....+ |+|+++|++.+++...+.....+ .++.++ ++|+.++..+.|..++.++..+|++||++
T Consensus 80 ~eAl~dAgl~~~--~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~ 156 (412)
T COG0304 80 VEALEDAGLDNE--LNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY 156 (412)
T ss_pred HHHHHHcCCCcc--cccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence 999999999832 12233 99999999999998876533333 344444 89999999999999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
++.++|+|+..||..|+++|+.|++|++||||+|..+++..+.+|..+++|+..+++|...|||||++++||++|||+++
T Consensus 157 ~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~gEGag~ 236 (412)
T COG0304 157 TPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGA 236 (412)
T ss_pred ChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEEecceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHH
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 338 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~a 338 (433)
+|||++++|++||++||++|.|++.+.|++|++.|.|++.+..++|+.||+++|++++|||||++|||+|+.+|..|..+
T Consensus 237 lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~a 316 (412)
T COG0304 237 LVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLA 316 (412)
T ss_pred EEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC-CCCccccCCcccccCccEEEEe
Q 013946 339 LIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV-VDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 339 l~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
|+++|+.. .+++|+|.|+++||++||+|.++++.++++|++|++||++|+++|+|+ ++++++.. ..+...++++++|
T Consensus 317 i~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~-~~~~~~~~~~lsn 395 (412)
T COG0304 317 IKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPN-EARTGAVRAALSN 395 (412)
T ss_pred HHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCC-cccccceeEEEec
Confidence 99999975 358899999999999999999999999999999999999999999987 45665443 3444459999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+++|+++|.
T Consensus 396 sfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 396 SFGFGGTNASLVFKRYQ 412 (412)
T ss_pred ccccCCcceEEEEecCC
Confidence 99999999999999984
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-80 Score=614.46 Aligned_cols=412 Identities=45% Similarity=0.744 Sum_probs=378.8
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccC--------CCCCCCCChhhhhcCC
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS--------FSTDGWVAPKLSKRMD 90 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~~~i~~~~~~~~~ 90 (433)
|.+++|+|||+|+++|.|.+.++||++|++|++++++++.++...++..+++.+++ ||++.|+++++.++|+
T Consensus 1 m~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d 80 (424)
T PRK06333 1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMD 80 (424)
T ss_pred CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcC
Confidence 44679999999999999999999999999999999999888777788888888887 7888889999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
|+++|++.++++||+|||++++++ .+..++||++|++.+++..+++++..+ ..+.+.++|+.++..+.|..+++|++
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~--~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 158 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTL--EDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI 158 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccc--CCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHH
Confidence 999999999999999999987632 156899999999999988877776655 44556778888888899999999999
Q ss_pred HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCC
Q 013946 170 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRD 248 (433)
Q Consensus 170 ~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~ 248 (433)
.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.. +.+|+..|+|||.+++
T Consensus 159 ~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~ 238 (424)
T PRK06333 159 RYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238 (424)
T ss_pred HhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999998899888889998888764 5668889999999999
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 328 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt 328 (433)
|+++|||++++|||++++|++||++||++|+|++.++|+.+.+.+.+++.++.++|++||+++|++|+||||||+|||||
T Consensus 239 G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt 318 (424)
T PRK06333 239 GFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATST 318 (424)
T ss_pred CeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCC
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCcccc
Q 013946 329 PAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKER 407 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~ 407 (433)
+.+|..|..+|+++|+...++++++.|+++||+++|||++++++++++|++|+|||++|+++|+|.++ .+++. ...+.
T Consensus 319 ~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~-~~~~~ 397 (424)
T PRK06333 319 PVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVA-NKARP 397 (424)
T ss_pred ccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccccc-CCCcc
Confidence 99999999999999996557899999999999999999999999999999999999999999999987 55533 45677
Q ss_pred cCccEEEEecccccceeeeeEEccCC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++.+++++|||||||+|+|+||++|+
T Consensus 398 ~~~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 398 MDMDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred cCcCEEEEeeecCCCeeEEEEEeccC
Confidence 88999999999999999999999984
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-79 Score=600.47 Aligned_cols=403 Identities=33% Similarity=0.569 Sum_probs=365.7
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCcccccccc-CCCCCCCCChhhhhcCCHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIK-SFSTDGWVAPKLSKRMDKFMLYLL 97 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~-~~~~~~~i~~~~~~~~~~~~~l~l 97 (433)
+++|+|||||+++|.|.+.++||++|++|++++++++.+. ...++.++++.+. +|| .++++++.++|+|++++++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d--~~~~~~~~~~~d~~~~~~l 88 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFD--HQLTRVELRRMSYLQRMST 88 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCcc--ccCCHHHHhhccHHHHHHH
Confidence 5799999999999999999999999999999999987542 2345666777763 344 3478899999999999999
Q ss_pred HHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCC
Q 013946 98 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 176 (433)
Q Consensus 98 ~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 176 (433)
.++++||+|||++ ..++.|+||++|++.++......++..+ ..+.+.++|..++..+.|..+.+++..++++||
T Consensus 89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~ 163 (418)
T PRK07910 89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG 163 (418)
T ss_pred HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence 9999999999985 3456899999999999988777666655 345566788888889999999999999999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhh-hhcCCCCCCCCCccccCCCCCcccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRA-LSQRNNDPTKASRPWDINRDGFVMGEG 255 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~-ls~~~~~~~~~~~pfd~~~~G~~~geG 255 (433)
+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++. ++..+++|++.|||||.+++|+++|||
T Consensus 164 ~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEG 243 (418)
T PRK07910 164 VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEG 243 (418)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeece
Confidence 9999999999999999999999999999999999999899999999999998 876667788999999999999999999
Q ss_pred eeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHH
Q 013946 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 335 (433)
Q Consensus 256 aaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E 335 (433)
++++|||++++|+++|++||++|+|++.++|+.+...++|.+.++.++|++||+++|++++||||||+|||||+.+|..|
T Consensus 244 aa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E 323 (418)
T PRK07910 244 GALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAE 323 (418)
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEE
Q 013946 336 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 336 ~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (433)
.++|+++|+.. ..+++++|+++||+++|||++++++++++|+++++||++|+++|+|.++++++.. .+++.+++++++
T Consensus 324 ~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~-~~~~~~~~~al~ 401 (418)
T PRK07910 324 GKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAG-EPRPGNYRYAIN 401 (418)
T ss_pred HHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC-CCcCCCccEEEE
Confidence 99999999964 3579999999999999999999999999999999999999999999998887543 344557899999
Q ss_pred ecccccceeeeeEEccC
Q 013946 416 NSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~ 432 (433)
|||||||+|+++||++|
T Consensus 402 nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 402 NSFGFGGHNVALAFGRY 418 (418)
T ss_pred eeecCCCeeEEEEEecC
Confidence 99999999999999986
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-79 Score=599.26 Aligned_cols=398 Identities=28% Similarity=0.468 Sum_probs=366.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++++|+...++++++.++|+++++|++.+++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~ 80 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD 80 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999888888888899999988888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ .++..|+||++|++.+++...+..+..+ ..+...++|+.++..+.+..++++++.||++||+++|
T Consensus 81 eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti 157 (399)
T cd00832 81 WALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV 157 (399)
T ss_pred HHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence 99999999875 5667899999999999988777666655 3345667788788888889999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|..++.++. ..+|...|||||.+++|+++|||++++|
T Consensus 158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~-~~~p~~~~rPFd~~~~G~~~gEGa~~lv 235 (399)
T cd00832 158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST-SDDPARAYLPFDAAAAGYVPGEGGAILV 235 (399)
T ss_pred cchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC-CCCCCCCcCCCcCCCCCEeeeceEEEEE
Confidence 9999999999999999999999 9999999999999999999999999876 3457789999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
||++++|++||++||++|+|++.++|+.+.. +.+.++.++|++||+++|++++|||||++|||||+.+|..|.++|+
T Consensus 236 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~ 312 (399)
T cd00832 236 LEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALA 312 (399)
T ss_pred EeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999988753 2578899999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccc
Q 013946 341 HCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420 (433)
Q Consensus 341 ~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~ 420 (433)
++|+.. .+|+++.|+++||+++|+|++++++++++|++++|||++|+++|+|.++++++.. +.++..+|++++|||||
T Consensus 313 ~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~-~~~~~~~~~al~nsfgf 390 (399)
T cd00832 313 AVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTG-RPRPAALRTALVLARGR 390 (399)
T ss_pred HHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCC-cccCCCCCEEEEeccCC
Confidence 999864 5889999999999999999999999999999999999999999999998887543 45566789999999999
Q ss_pred cceeeeeEE
Q 013946 421 GGHNSSIIF 429 (433)
Q Consensus 421 gG~n~~~vl 429 (433)
||+|+|+||
T Consensus 391 GG~na~lvl 399 (399)
T cd00832 391 GGFNSALVV 399 (399)
T ss_pred CCcceEEEC
Confidence 999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-78 Score=596.61 Aligned_cols=403 Identities=44% Similarity=0.714 Sum_probs=373.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+++.+++|++..++++++.+++++..+|++.+++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~ 81 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999888888888999999998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ .++..++|+++|+..+++...+++...+ ..+.+.++|+.++..+.|..+.+++..||++||++++
T Consensus 82 ~AL~dAGl~~~---~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~ 158 (406)
T PRK08439 82 EAMKDAGFLPE---ELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS 158 (406)
T ss_pred HHHHHcCCCcc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence 99999999876 5567899999999998887766655443 4456678898899999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|++||+|+|..+++..+.+|..++.|+..+.+|+..|||||.+++|+++|||++++|
T Consensus 159 ~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~lv 238 (406)
T PRK08439 159 VTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALV 238 (406)
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEEEE
Confidence 99999999999999999999999999999999989999999999999999877778899999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
||++++|++||++||++|.|++.++|+++++.|.+ .++.++|++||+++|+ +|||||++|||||+.+|..|.++|+
T Consensus 239 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~ 314 (406)
T PRK08439 239 LEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALK 314 (406)
T ss_pred EccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999988877665 6788999999999999 7999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. ..+++++.|+++||+++|||++++++++++|++|+|||++|+++|+|.+++++++. +.++++++++++||||
T Consensus 315 ~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~nsfg 393 (406)
T PRK08439 315 ELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPN-VARKAELNVVMSNSFG 393 (406)
T ss_pred HHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCC-ccccCCCCEEEEeeec
Confidence 999875 34689999999999999999999999999999999999999999999999887543 4566789999999999
Q ss_pred ccceeeeeEEccC
Q 013946 420 FGGHNSSIIFSPY 432 (433)
Q Consensus 420 ~gG~n~~~vl~~~ 432 (433)
|||+|+|+||++|
T Consensus 394 fGG~n~~lvl~~~ 406 (406)
T PRK08439 394 FGGTNGVVIFKKV 406 (406)
T ss_pred CCCceEEEEEecC
Confidence 9999999999987
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-78 Score=592.41 Aligned_cols=400 Identities=39% Similarity=0.634 Sum_probs=358.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|||||||+++|.|.+.++||++|++|+++|+++++|+...++..+.+++ +|++..+++++..+++++..++++.+++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNV-KLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEc-CCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 699999999999999999999999999999999999998888888888887 4777777888888999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHH--hhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
+||+|||+.++ .++..|+||++|++.+.+......+..+. .+.+.++|+.++..+.|..+++|++.||++||+++
T Consensus 81 ~Al~dAGl~~~---~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~t 157 (406)
T PRK07967 81 QAIADAGLSEE---QVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYS 157 (406)
T ss_pred HHHHHcCCCCc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccc
Confidence 99999999865 55678999999999887766555444442 34566788999999999999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCcccccceeE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
++++|+|++.||..|+++|+.|++|++||||+|. +.+.....|..++.++.. +.+|+..|||||.+++|+++|||+++
T Consensus 158 vs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~ 236 (406)
T PRK07967 158 ISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236 (406)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceEEE
Confidence 9999999999999999999999999999999997 455566678889998754 46688899999999999999999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHH
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 338 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~a 338 (433)
+|||++++|++||++||++|+|++.++|+++++. |++.++.++|++||+.++ + |||||++|||||+.+|..|.++
T Consensus 237 lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~--p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~~A 311 (406)
T PRK07967 237 VVVEELEHALARGAKIYAEIVGYGATSDGYDMVA--PSGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKELGA 311 (406)
T ss_pred EEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCC--CCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999999998764 578899999999998654 5 9999999999999999999999
Q ss_pred HHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccCccEEEEec
Q 013946 339 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 339 l~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s 417 (433)
|+++|+.. .++|+++|+++||+++|||++++++++++|++++|||++|+++++|++ +.+++.. ..+..+++++++||
T Consensus 312 i~~~fg~~-~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s 389 (406)
T PRK07967 312 IREVFGDK-SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTE-TTDNAELTTVMSNS 389 (406)
T ss_pred HHHHhCCC-CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCC-CCcCCCCCEEEEec
Confidence 99999864 468999999999999999999999999999999999999999999987 4565433 33444689999999
Q ss_pred ccccceeeeeEEccCC
Q 013946 418 FGFGGHNSSIIFSPYK 433 (433)
Q Consensus 418 ~g~gG~n~~~vl~~~~ 433 (433)
|||||+|+|+||++|.
T Consensus 390 fgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 390 FGFGGTNATLVFRRYK 405 (406)
T ss_pred ccCCCeeEEEEEEecC
Confidence 9999999999999984
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=595.36 Aligned_cols=401 Identities=35% Similarity=0.525 Sum_probs=363.7
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCC-CCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC-TSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
++|||||||+++|.|.+.++||++|++|+++++++++|+. ..++.++++.+++|+...++++++.++|++.++|++.++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~aa 81 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRAS 81 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999988764 467788899999998877788889999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHH-hhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
.+||+|||+... +..+++|+||++|++.++....+++...+. .....++|..++..++|..++++++.|+++||+++
T Consensus 82 ~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~t 159 (405)
T PRK09116 82 ELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIP 159 (405)
T ss_pred HHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCccc
Confidence 999999999532 134568999999999998888777776653 34456778777888889999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|++|++||||+|. +++.....|..++.++..+..|+..|||||.+++|+++|||++++
T Consensus 160 i~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~~~ 238 (405)
T PRK09116 160 TSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGTL 238 (405)
T ss_pred ccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEEEE
Confidence 9999999999999999999999999999999998 677777888888888766667888999999999999999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHH
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 339 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al 339 (433)
|||++++|++||++||++|+|++.++|+.+.+.| +..++.++|+++|+++|++|+|||||++|||||+.+|..|.++|
T Consensus 239 vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai 316 (405)
T PRK09116 239 VLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQAT 316 (405)
T ss_pred EEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHH
Confidence 9999999999999999999999999999887654 56788999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccCccEEEEecc
Q 013946 340 IHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALSNSF 418 (433)
Q Consensus 340 ~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~ 418 (433)
+++|+. .+|++|.|+++||+++|+|++++++++++|++|+|||++|+++|+|++ +.+++. .+.++++.+++|+|||
T Consensus 317 ~~~fg~--~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~-~~~~~~~~~~~l~nsf 393 (405)
T PRK09116 317 AAVFGA--RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIM-GEAREIDTEYVMSNNF 393 (405)
T ss_pred HHHhCC--CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccC-CCCccCCCCEEEEeee
Confidence 999986 488999999999999999999999999999999999999999999998 577644 3466678899999999
Q ss_pred cccceeeeeEEc
Q 013946 419 GFGGHNSSIIFS 430 (433)
Q Consensus 419 g~gG~n~~~vl~ 430 (433)
||||+|+++||+
T Consensus 394 GfGG~n~~lvl~ 405 (405)
T PRK09116 394 AFGGINTSLIFK 405 (405)
T ss_pred cCCcccEEEEEC
Confidence 999999999985
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-78 Score=599.72 Aligned_cols=409 Identities=51% Similarity=0.827 Sum_probs=379.1
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+.+++|+++.|+++++.++|+|+++|++.++
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 80 (411)
T PRK07314 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988888888899999999988899999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
++||+|||++++ +++..++||++|++.+++...++++..+ ..+...++|+.++....|..+++++..||++||+++
T Consensus 81 ~~Al~dAGl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (411)
T PRK07314 81 KQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHS 157 (411)
T ss_pred HHHHHHcCCCcc---cCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCcccc
Confidence 999999999886 5567899999999999988888877766 334556778878888889999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.+..+|+..++|||.+++|+++||||+++
T Consensus 158 v~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaav 237 (411)
T PRK07314 158 IVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGIL 237 (411)
T ss_pred chhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEEE
Confidence 99999999999999999999999999999999998899888999999999876667888999999999999999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHH
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 339 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al 339 (433)
||++++.|+++|+++|++|+|++.++|+.+.+.+.+.+.++.+++++||+++|++++||||||+|||||+.+|..|.++|
T Consensus 238 vL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al 317 (411)
T PRK07314 238 VLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAI 317 (411)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHH
Confidence 99999999999999999999999999998888888888889999999999999999999999999999999999999999
Q ss_pred HHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecc
Q 013946 340 IHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSF 418 (433)
Q Consensus 340 ~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 418 (433)
.++|+.. .++++++.|+++||+++|||++++++++++|++|+|||++|+++|++.++++++.. +.+..+++++++|||
T Consensus 318 ~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~s~ 396 (411)
T PRK07314 318 KRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPN-EARERKIDYALSNSF 396 (411)
T ss_pred HHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCC-cccCCCCCEEEEecc
Confidence 9999854 46899999999999999999999999999999999999999999999988876543 455567899999999
Q ss_pred cccceeeeeEEccCC
Q 013946 419 GFGGHNSSIIFSPYK 433 (433)
Q Consensus 419 g~gG~n~~~vl~~~~ 433 (433)
||||+|+|+||++|+
T Consensus 397 gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 397 GFGGTNASLVFKRYE 411 (411)
T ss_pred cCCCceEEEEEecCC
Confidence 999999999999985
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-76 Score=587.08 Aligned_cols=409 Identities=43% Similarity=0.735 Sum_probs=360.9
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCC--------------CCCCcccccccc------CCCCC
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTD 78 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--------------~~~~~~~~~~i~------~~~~~ 78 (433)
...++|+|||||+++|.|.+.++||++|++|++++++++++++ ..++.+.++.++ +||+.
T Consensus 3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 82 (437)
T PLN02836 3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE 82 (437)
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence 3456899999999999999999999999999999999976542 234455666664 46655
Q ss_pred CCCChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccc
Q 013946 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPF 157 (433)
Q Consensus 79 ~~i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 157 (433)
.|.. .+++++..+|++.++++||+|||+.+.. ..+.+++||++|++.+++..+.++...+ ....+.++|+.++.
T Consensus 83 ~~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~--~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (437)
T PLN02836 83 LWLN---SRSSSRFIGYALCAADEALSDARWLPSE--DEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPR 157 (437)
T ss_pred Hhcc---ccccCHHHHHHHHHHHHHHHHcCCCccc--ccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhh
Confidence 4432 4678999999999999999999997641 2356899999999988887776665544 33456788888999
Q ss_pred cccchHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCC
Q 013946 158 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDP 236 (433)
Q Consensus 158 ~~~~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~ 236 (433)
.+.|.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.. +.+|
T Consensus 158 ~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p 237 (437)
T PLN02836 158 ILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCP 237 (437)
T ss_pred hcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCc
Confidence 999999999999999999999999999999999999999999999999999999998889888999998888743 4457
Q ss_pred CCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 237 TKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 237 ~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
+..|+|||.+++|+++|||++++|||++++|+++|+++|++|+|++.++|+.+.+.|.+++.+..+++++||++|||+++
T Consensus 238 ~~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~ 317 (437)
T PLN02836 238 TEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPN 317 (437)
T ss_pred ccccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHh
Confidence 78999999999999999999999999999999999999999999999999999888888888899999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
||||||+|||||+.+|..|.++++++|+.. ..++++++|+++||+++|||++++++++++|++++|||++|+++|+|
T Consensus 318 dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p 397 (437)
T PLN02836 318 QVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDP 397 (437)
T ss_pred HcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC
Confidence 999999999999999999999999999874 25899999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.++.++++....+..+++++++|||||||+|+|+||++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 398 IFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 998876544333445789999999999999999999874
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-75 Score=580.93 Aligned_cols=405 Identities=50% Similarity=0.848 Sum_probs=375.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++++|+++.|+++++.++|+++++|++++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999888888888999999999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++..++|+|+|++.+++...++++..+ ..+.+.++|+.++....|..+++++..||++||++++
T Consensus 81 ~Al~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v 157 (407)
T TIGR03150 81 EAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV 157 (407)
T ss_pred HHHHhcCCCcc---cCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence 99999999986 5567899999999999888887776655 3455667888888888999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++..+.+|...++|||.+++|+++||||+++|
T Consensus 158 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaalv 237 (407)
T TIGR03150 158 VTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237 (407)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEEE
Confidence 99999999999999999999999999999999988998888999999998777777788999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|+++++|+++|+++|++|+|++.++|+.+...+.+.+.++.+++++||+++|++++||||||+|||||+.+|..|..++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~ 317 (407)
T TIGR03150 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIK 317 (407)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999988888888888899999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .+++|++.|+++||+++|||++++++++++|++++|||++|+++|++.++++++.. +.++++++++++||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~s~g 396 (407)
T TIGR03150 318 RVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN-EARERKIDYALSNSFG 396 (407)
T ss_pred HHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC-CCccCCcCEEEEeccc
Confidence 999864 36999999999999999999999999999999999999999999999998887543 4566678999999999
Q ss_pred ccceeeeeEEc
Q 013946 420 FGGHNSSIIFS 430 (433)
Q Consensus 420 ~gG~n~~~vl~ 430 (433)
|||+|+|+||+
T Consensus 397 fgG~n~~~vl~ 407 (407)
T TIGR03150 397 FGGHNASLVFK 407 (407)
T ss_pred CCCceEEEEeC
Confidence 99999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-75 Score=657.03 Aligned_cols=404 Identities=26% Similarity=0.437 Sum_probs=354.1
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeC--CCCCCCCC-----------Ccccccccc--CCCCCCC-CCh
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI--ETFDCTSF-----------PTKIAAEIK--SFSTDGW-VAP 83 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~--~~~~~~~~-----------~~~~~~~i~--~~~~~~~-i~~ 83 (433)
+.++|+||||||++|.+.+.++||++|.+|+++++++ ++|+...| ..+.++.++ +||+.+| |++
T Consensus 5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p 84 (2582)
T TIGR02813 5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPP 84 (2582)
T ss_pred CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCH
Confidence 3478999999999999999999999999999999988 45655433 234566666 5888777 999
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHH-----------HH----------HHHH
Q 013946 84 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF-----------YD----------AIEA 142 (433)
Q Consensus 84 ~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~-----------~~----------~~~~ 142 (433)
++++.|||+++|+++++++||+|||+.+ .++++|+|||+|++.+++... .+ ..+.
T Consensus 85 ~ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (2582)
T TIGR02813 85 NILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEM 160 (2582)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHH
Confidence 9999999999999999999999999975 467799999999987643210 00 0011
Q ss_pred H----HhhcccCCCCcccccccchHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh
Q 013946 143 L----RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI 218 (433)
Q Consensus 143 ~----~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~ 218 (433)
+ ...+..+++..+++...|..+++|++.|||+||+++|+++|+||+.||++|+++|++|+||++||||++..++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~ 240 (2582)
T TIGR02813 161 LIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPF 240 (2582)
T ss_pred hhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHH
Confidence 1 112234566778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChH
Q 013946 219 GLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV 298 (433)
Q Consensus 219 ~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~ 298 (433)
.+..|.+.+.|+ +++.|||||.+++||++|||++++|||++++|+++|++||++|+|++.++||+......|+..
T Consensus 241 ~~~~fs~~~~lS-----~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~ 315 (2582)
T TIGR02813 241 MYMSFSKTPAFT-----TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPE 315 (2582)
T ss_pred HHHHHHhccCcC-----CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHH
Confidence 999999999998 667899999999999999999999999999999999999999999999999986555677788
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
++.++|++||++||++|+||+|||+|||||+.||.+|.++|.++|+.. .+++|+|+|++|||+++|||++++|+++
T Consensus 316 gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 316 GQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999863 3589999999999999999999999999
Q ss_pred HHHHcCCcCCCCCCCCCCCCCCCc---cccCCccccc------CccEEEEecccccceeeeeEEccC
Q 013946 375 QAIRTGWIHPNINLENPDAVVDTN---VLVGPKKERL------EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 375 ~~l~~~~ipp~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++|++++|||++|+++|+|.++++ +++..+.++| .+|++++|||||||+|+|+||++|
T Consensus 396 lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 396 LALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred HHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 999999999999999999998764 3444445555 368999999999999999999997
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-73 Score=562.62 Aligned_cols=399 Identities=29% Similarity=0.425 Sum_probs=347.8
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCC--------CCCccccccccCCCCCCCCChhhhhcCCHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT--------SFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 92 (433)
|++|||||||+++|.|.+.++||++|++|+++++++++++.. ..+..+++++++|++..+++++..+++++.
T Consensus 1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 80 (410)
T PRK07103 1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLS 80 (410)
T ss_pred CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHH
Confidence 479999999999999999999999999999999999876543 234557788988887777888889999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
.+|++.++++||+|||++ ..+.+|+||++|++.+.......++..+........|........+..++++++.||
T Consensus 81 ~~lal~Aa~eAl~dAgl~-----~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 81 AQAALAAAREAWRDAALG-----PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred HHHHHHHHHHHHHhcCcC-----CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 999999999999999995 345689999999887776666665555544444556665556667788999999999
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC--CCCCCCCCccccCCCCCc
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR--NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~--~~~~~~~~~pfd~~~~G~ 250 (433)
++||+++++++|+|++.||..|+++|++|++|++||+|++..+++..+.+|..++.|+.. ..+|...|||||.+++|+
T Consensus 156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 999999999999999999999999999999999999999887889999999998888753 456888999999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++|||++++|||+.++|+++|+++|++|+|++.++|+.+.. .|+..++.+++++||+++|++++|||||++|||||+.
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~--~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGP--DPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCC--CCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCC
Confidence 99999999999999999999999999999999999998754 5567778899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCC-CCCCCCccccCCcccccC
Q 013946 331 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP-DAVVDTNVLVGPKKERLE 409 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~ 409 (433)
+|..|.++|...+ ..+++|++.|+++||+++|||++++++++++|++++|||++|+++| ++.+ +++. ...+..+
T Consensus 314 ~D~~E~~al~~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~--~~v~-~~~~~~~ 388 (410)
T PRK07103 314 GDETELAALFASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RWVG-STAESAR 388 (410)
T ss_pred CCHHHHHHHhcCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCc--CccC-CCCcCCC
Confidence 9999999993322 1358999999999999999999999999999999999999999987 5543 3332 2344556
Q ss_pred ccEEEEecccccceeeeeEEcc
Q 013946 410 VKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 410 ~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
++++++|||||||+|+|+||++
T Consensus 389 ~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 389 IRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCEEEEecccCCCceEEEEEeC
Confidence 8999999999999999999985
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-73 Score=562.48 Aligned_cols=404 Identities=51% Similarity=0.853 Sum_probs=374.4
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|++++++++.++...++..+.+.+++|++.+++++++.++|+++++|++.+++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE 80 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence 48999999999999999999999999999999999888777778888899999988877999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++..++|+++|++.+++...++++..+ ..+.+.++|..++....+..+++++..||++||++++
T Consensus 81 ~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v 157 (406)
T cd00834 81 EALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV 157 (406)
T ss_pred HHHHHcCCCcc---cCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence 99999999986 5667899999999999998888877766 4455667888888888899999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|.+||+|+|....|..+..|...+.++.....|...++|||.+++|+++||||+++|
T Consensus 158 ~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~v 237 (406)
T cd00834 158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237 (406)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEEE
Confidence 99999999999999999999999999999999988899999999999998776667778999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.++|+++++++|++|+|++.+.++.+.+.+.+.+.++.++++++|+++|++++|||||++|+|||+.+|..|.++|.
T Consensus 238 L~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~ 317 (406)
T cd00834 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIK 317 (406)
T ss_pred EecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHH
Confidence 99999999999999999999999999988888888889999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|++.++++++. .+.++|+.|++++||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s~g 396 (406)
T cd00834 318 RVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP-NEAREAPIRYALSNSFG 396 (406)
T ss_pred HHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCccccccEEEEeeec
Confidence 999873 4689999999999999999999999999999999999999999999977777644 35678888999999999
Q ss_pred ccceeeeeEE
Q 013946 420 FGGHNSSIIF 429 (433)
Q Consensus 420 ~gG~n~~~vl 429 (433)
|||+|+|+||
T Consensus 397 ~gG~n~~~vl 406 (406)
T cd00834 397 FGGHNASLVF 406 (406)
T ss_pred CCceeeEEEC
Confidence 9999999986
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-73 Score=560.87 Aligned_cols=396 Identities=44% Similarity=0.760 Sum_probs=353.6
Q ss_pred eecCcCCCHHHHHHHHHcCCCCceeCCCCC----------------CCCCCcccccccc--CCCCCCCCChhhhhcCCHH
Q 013946 31 LVSPLGHEPDVFYNNLLEGVSGISEIETFD----------------CTSFPTKIAAEIK--SFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 31 ~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~----------------~~~~~~~~~~~i~--~~~~~~~i~~~~~~~~~~~ 92 (433)
+++|.|.+.++||++|++|+++++++++++ ...++..++++|+ +|++..|.. ..+.++.
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~---~~~~~~~ 77 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAP---TKRESRA 77 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCC---cccCCHH
Confidence 479999999999999999999999997766 4456677788887 566655522 2246899
Q ss_pred HHHHHHHHHHHHHhCCCC-cccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHH
Q 013946 93 MLYLLTAGKKALADGGIT-EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~-~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
++|++.++++||+|||++ ++ .++..++|+++|++.+++....+++..+ ..+.+.++|+.++..+.|.++++|++.
T Consensus 78 ~~l~~~aa~~Al~dAGl~~~~---~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 78 THFAMAAAREALADAKLDILS---EKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred HHHHHHHHHHHHHHcCCCccc---ccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999998 55 4566899999999998887776666555 345667788889999999999999999
Q ss_pred hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCC
Q 013946 171 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDG 249 (433)
Q Consensus 171 lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G 249 (433)
||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|.+++.++.. +.+|+..|+|||.+++|
T Consensus 155 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G 234 (421)
T PTZ00050 155 HKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAG 234 (421)
T ss_pred hCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999988889888999999888753 44577899999999999
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEeccCCC
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH-SGVSREDVNYINAHATST 328 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~-agl~~~dId~v~~h~~gt 328 (433)
+++||||+++|||++++|+++|++||++|+|++.++|+.+.+.|.+++.++.++|++||++ ||++++||||||+|||||
T Consensus 235 ~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt 314 (421)
T PTZ00050 235 FVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATST 314 (421)
T ss_pred EeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccC
Confidence 9999999999999999999999999999999999999999988999999999999999999 999999999999999999
Q ss_pred CCCCHHHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCccc
Q 013946 329 PAGDIKEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKE 406 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 406 (433)
+++|.+|.+++.++|+.. .+++++++|+++||+++|||++++++++++|++++|||++|+++|++.++++++......
T Consensus 315 ~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~ 394 (421)
T PTZ00050 315 PIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAH 394 (421)
T ss_pred CCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccC
Confidence 999999999999999864 468999999999999999999999999999999999999999999999988775543222
Q ss_pred c-cCccEEEEecccccceeeeeEEccC
Q 013946 407 R-LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 407 ~-~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+ .+++++++|||||||+|+|+||++|
T Consensus 395 ~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 395 PLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred cCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 2 2579999999999999999999986
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-72 Score=557.44 Aligned_cols=394 Identities=37% Similarity=0.580 Sum_probs=356.6
Q ss_pred CCEEEEecceecCcCCC---HHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcC---CHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHE---PDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRM---DKFMLY 95 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~---~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~---~~~~~l 95 (433)
.+|+|||||+++|.|.+ .++||++|++|+++++++++++ ..++..+.+.+++|+ ++++..+++ +++++|
T Consensus 1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l 75 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLL 75 (407)
T ss_pred CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHH
Confidence 47999999999999999 9999999999999999998876 566777888888776 577778888 999999
Q ss_pred HHHHHHHHHHhCCCCcccccc-cCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCccccccc--chHHHHHHHHhC
Q 013946 96 LLTAGKKALADGGITEDVMNE-LDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT--NMGSAMLAMDLG 172 (433)
Q Consensus 96 ~l~aa~~Al~dAgl~~~~~~~-~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~ia~~lg 172 (433)
++.++++||+|||++++ + ++..++|+++|++.++....++++.... +..+|+.++..+. |..++++++.||
T Consensus 76 ~~~aa~~Al~dAGl~~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 76 ALVATEEALADAGITDP---YEVHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred HHHHHHHHHHhCCCCcc---ccCCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhC
Confidence 99999999999999875 4 5678999999999998877766554433 3466777777777 999999999999
Q ss_pred C-CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 173 W-MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 173 l-~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
+ +||+++|+++|+|++.||..|+++|++|++|++||+|+|... +..+..|..++.++.....|...++|||.+++|++
T Consensus 150 l~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 228 (407)
T cd00828 150 SSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFV 228 (407)
T ss_pred cCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcEE
Confidence 9 999999999999999999999999999999999999999977 88888999999998766557789999999999999
Q ss_pred cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG 331 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~ 331 (433)
+||||+++|||++++|++||++||++|.|++.++|+.+...+. ++.++.++|++||+++|++++|||||++|+|||+.+
T Consensus 229 ~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~ 307 (407)
T cd00828 229 EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN 307 (407)
T ss_pred eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc
Confidence 9999999999999999999999999999999999998877665 788999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccC-
Q 013946 332 DIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE- 409 (433)
Q Consensus 332 D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~- 409 (433)
|..|.++++++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.++.+++. .+.++++
T Consensus 308 D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 386 (407)
T cd00828 308 DVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVV-GLSRDLNL 386 (407)
T ss_pred cHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccccc-CcCccCCC
Confidence 999999999999874 3689999999999999999999999999999999999999999999999776544 3456666
Q ss_pred -ccEEEEecccccceeeeeEE
Q 013946 410 -VKAALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 410 -~~~~l~~s~g~gG~n~~~vl 429 (433)
++.+++|||||||+|+|+||
T Consensus 387 ~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 387 KVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CccEEEEecccCCCcceEEEC
Confidence 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-72 Score=541.86 Aligned_cols=377 Identities=34% Similarity=0.540 Sum_probs=329.6
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
|+||||||+|+++|.|. .++||++|++|++++++++.|+. ++....+.+. + .+ .+++ ++...++
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~------~~---~~~~---~~~~~a~ 64 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-N------QP---SSLE---DLTKTVV 64 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-c------cc---cccc---HHHHHHH
Confidence 46999999999999999 99999999999999999877642 1111111110 0 01 1233 3556889
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHh-hc---ccCCCCcccccccchHHHHHHHHhCCCCC
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SY---KKMNPFCVPFATTNMGSAMLAMDLGWMGP 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 176 (433)
++||+|+|++++ .+|+||++|++.++...++++...... +. ..++|..++..++|..++++++.|+++||
T Consensus 65 ~~Al~dagl~~~------~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp 138 (381)
T PRK05952 65 TAALKDAGLTPP------LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP 138 (381)
T ss_pred HHHHHhcCCCCC------CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence 999999999752 378999999999998888887766532 21 24567778888999999999999999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccce
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa 256 (433)
+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++. ..|||||.+++|+++|||+
T Consensus 139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~rPfd~~r~G~v~gEGa 212 (381)
T PRK05952 139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------TGAYPFDRQREGLVLGEGG 212 (381)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC------CCCCCCCCCCCCccccccE
Confidence 9999999999999999999999999999999999998889999999999998873 3599999999999999999
Q ss_pred eEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHH
Q 013946 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 336 (433)
Q Consensus 257 aalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~ 336 (433)
+++|||++++|+++|++||++|+|++.++|+.+...+.+++..+.++|++||+++|++|+|||||++|||||+.+|..|.
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~ 292 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHH
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 337 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 337 ~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
++|+++|+. .+++++.|+++||+++|||++++++++++|++++|||++|+++|++ +.+++. +++..+++++++|
T Consensus 293 ~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~--~~~~v~--~~~~~~~~~~l~~ 366 (381)
T PRK05952 293 NLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEF--DLNFVR--QAQQSPLQNVLCL 366 (381)
T ss_pred HHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC--CCCcCC--CcccCCCCEEEEe
Confidence 999999985 4899999999999999999999999999999999999999998755 444443 3455678999999
Q ss_pred cccccceeeeeEEcc
Q 013946 417 SFGFGGHNSSIIFSP 431 (433)
Q Consensus 417 s~g~gG~n~~~vl~~ 431 (433)
||||||+|+++||++
T Consensus 367 s~gfGG~na~lvl~~ 381 (381)
T PRK05952 367 SFGFGGQNAAIALGK 381 (381)
T ss_pred eecCCCeeEEEEEeC
Confidence 999999999999975
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-72 Score=600.87 Aligned_cols=396 Identities=29% Similarity=0.481 Sum_probs=353.7
Q ss_pred CEEEEecceecCcCCCHHHHHHHHHcCCCCceeC--CCCCCCCCC-----------cccccc---ccCCCCCCC-CChhh
Q 013946 23 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI--ETFDCTSFP-----------TKIAAE---IKSFSTDGW-VAPKL 85 (433)
Q Consensus 23 ~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~--~~~~~~~~~-----------~~~~~~---i~~~~~~~~-i~~~~ 85 (433)
+|+|+||+|++|...++++||++|.+|++.++++ ++|+...+. .+.++. ++.||+.+| |+|++
T Consensus 5 ~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrE 84 (1061)
T COG3321 5 PIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPRE 84 (1061)
T ss_pred cEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHH
Confidence 3999999999999999999999999999999998 455554442 123343 457899888 99999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHH
Q 013946 86 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 86 ~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
+..||||+||.++.+++||+|||+.++ .+..+++|||+|.+..++...... .. ....++.......+..+.
T Consensus 85 A~~mDPQqRllLe~aw~AlEdAG~~~~---~l~g~~tgV~~g~~~~~y~~~~~~-----~~-~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 85 AEAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGVFAGASVADYLLLLLA-----DD-EAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHhcCchHhHHHHHHHHHHHHcCCCcc---ccCCcceEEEEeeccCcccccccc-----cc-ccccceecccchhhHHHH
Confidence 999999999999999999999999997 666789999999987655432110 00 133445555666778999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
++++.|+|+||+++|+++|+|++.|+++|++.|+.|+||++|+||++...+|.....|.+.++|+ |++.|++||.
T Consensus 156 Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls-----~~g~c~~fd~ 230 (1061)
T COG3321 156 RISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFDA 230 (1061)
T ss_pred HHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC-----CCCcceeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998 8899999999
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
++||+++|||++++||+++++|.++|++||++|+|.++++||.......|++.++...+++||+++||+|++|+|||+||
T Consensus 231 ~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 99999999999999999999999999999999999999999977677888999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHcCC---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC---cc
Q 013946 326 TSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT---NV 399 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~~~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~---~~ 399 (433)
|||++||++|+++|..+|+.. .++.++|+|+|+||+..|+|+.+++|++|+|+|+++||++|+++|+|.+++ ++
T Consensus 311 TGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~ 390 (1061)
T COG3321 311 TGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPF 390 (1061)
T ss_pred CCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCe
Confidence 999999999999999999854 368899999999999999999999999999999999999999999999986 45
Q ss_pred ccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 400 LVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 400 ~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++..+.++| .+|++.++||||||+|+|+||++|
T Consensus 391 ~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~ 427 (1061)
T COG3321 391 VVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA 427 (1061)
T ss_pred EeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence 555555555 479999999999999999999987
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-69 Score=537.48 Aligned_cols=403 Identities=36% Similarity=0.487 Sum_probs=349.0
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
.+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.++.++.. ....+++.+++++.+
T Consensus 9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~a 82 (425)
T PRK06501 9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPES------PFGASALSEALARLA 82 (425)
T ss_pred CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccc------cccccCHHHHHHHHH
Confidence 45789999999999999999999999999999999999998888888888888533321 223466788999999
Q ss_pred HHHHHHhCCCCccccc-----------ccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 100 GKKALADGGITEDVMN-----------ELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~-----------~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
+++||+|||+.+.+++ .....+++++.++.......++.. +........+..++....+..+.+++
T Consensus 83 a~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 83 AEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRL---LRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHH---HhhcCcccCChhhhhhcccHHHHHHH
Confidence 9999999999643211 012568889888765443322221 12212222334456667788899999
Q ss_pred HHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 169 MDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 169 ~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
..||++||+++|+++|+|++.||.+|+++|++|++|++||+|+|..+++..+..|..++.++...+.|+..|||||.+++
T Consensus 160 ~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~ 239 (425)
T PRK06501 160 DRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRD 239 (425)
T ss_pred HHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999888999999999999998777778889999999999
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 328 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt 328 (433)
|+++|||++++|||+.++|+++|++||++|.|++.++|+.+...+.+++..+.++|++||+++|++++|||||++|||||
T Consensus 240 G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt 319 (425)
T PRK06501 240 GFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTST 319 (425)
T ss_pred CeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccC
Confidence 99999999999999999999999999999999999999988887888888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccc
Q 013946 329 PAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 407 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 407 (433)
+.+|..|..+|.++|+.. ..++|++.|+++||+++|||++++++++++|++|++||++|+++|+|.++++++.. ..+.
T Consensus 320 ~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~-~~~~ 398 (425)
T PRK06501 320 PENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPN-VARD 398 (425)
T ss_pred cchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCC-cccC
Confidence 999999999999999854 36899999999999999999999999999999999999999999999998887543 3455
Q ss_pred cCccEEEEecccccceeeeeEEccC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+++.+++|||||||+|+|+||+++
T Consensus 399 ~~~~~~l~ns~gfgG~n~~~vl~~~ 423 (425)
T PRK06501 399 ARVTAVLSNSFGFGGQNASLVLTAE 423 (425)
T ss_pred CCCCEEEEeCccCCCeeEEEEEecC
Confidence 6789999999999999999999987
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=518.85 Aligned_cols=338 Identities=41% Similarity=0.652 Sum_probs=313.0
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHH
Q 013946 89 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAML 167 (433)
Q Consensus 89 ~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i 167 (433)
+++..++++.++++||+|||+. .+.+|+||++|++.+++..+++++..+ ..+.+.++|+.++..+.|..++++
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 74 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV 74 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence 4678899999999999999975 345789999999999998888877665 456677899999999999999999
Q ss_pred HHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCC
Q 013946 168 AMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDIN 246 (433)
Q Consensus 168 a~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~ 246 (433)
++.||++||+++++++|+|++.||..|+++|+.|++|++||||+|..+++..+.+|..++.|+.. +.+|+..|||||.+
T Consensus 75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~ 154 (342)
T PRK14691 75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTA 154 (342)
T ss_pred HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999854 55688899999999
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
++|+++||||+++|||++++|++||.++|++|+|++.++|+.+...+.|++.+..++|++||+++||+++||||||+|||
T Consensus 155 r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgt 234 (342)
T PRK14691 155 RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHAT 234 (342)
T ss_pred CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCcc
Q 013946 327 STPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKK 405 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~ 405 (433)
||+.+|..|.++|+++|+....++|+|+|+++||+++|||+++++.++++|++++|||++|+++|+|.++ .+++. .+.
T Consensus 235 gT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~-~~~ 313 (342)
T PRK14691 235 STPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA-GNA 313 (342)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc-CCC
Confidence 9999999999999999987556899999999999999999999999999999999999999999999884 66643 345
Q ss_pred cccCccEEEEecccccceeeeeEEccCC
Q 013946 406 ERLEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 406 ~~~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++++++++++|||||||+|+++||++|.
T Consensus 314 ~~~~~~~al~nsfgfGG~n~~lvl~~~~ 341 (342)
T PRK14691 314 QPHDMTYALSNGFGFAGVNASILLKRWV 341 (342)
T ss_pred ccCCCCEEEEeCccCCCeeEEEEEeecc
Confidence 5667999999999999999999999983
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-67 Score=528.07 Aligned_cols=395 Identities=31% Similarity=0.493 Sum_probs=345.5
Q ss_pred EEEEecceecCcCCCHHHHHHHHHcCCCCceeCC--CCCCCCC------------Ccccccccc---CCCCCCC-CChhh
Q 013946 24 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTSF------------PTKIAAEIK---SFSTDGW-VAPKL 85 (433)
Q Consensus 24 v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~--~~~~~~~------------~~~~~~~i~---~~~~~~~-i~~~~ 85 (433)
|+|||||+++|.|.+.++||++|.+|++++++++ +|+...+ ....++.++ +||++.+ +++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 6899999999999999999999999999999874 4544332 234455443 4777666 88999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHH
Q 013946 86 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 86 ~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
.+++++.++|++.++++||+|||++++ +++.+|++||+|++.++ +...+.......+++.++....+..+.
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~---~id~~~~gv~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 151 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPE---SLRGSRTGVFVGAMSSD------YAELLARDPEDIEGYAATGTARSFIAN 151 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChh---HcCCCCCEEEEEEcHHH------HHHHHhhCccccchhhhccchhHHHHH
Confidence 999999999999999999999999886 45567999999987543 223333444556777777788888999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
+++..||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|...+.++ ++..++|||.
T Consensus 152 ~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~~ 226 (424)
T smart00825 152 RISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS-----PDGRCKTFDA 226 (424)
T ss_pred HHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC-----CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999888888888888887776 5668999999
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
+++|+++|||++++||++.++|+++++++|++|+|++.++++.+.....|++..+..++++||+++|++++|||||++||
T Consensus 227 ~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~ 306 (424)
T smart00825 227 DADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHG 306 (424)
T ss_pred CCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeC
Confidence 99999999999999999999999999999999999999999887666677888899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc---
Q 013946 326 TSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN--- 398 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~--- 398 (433)
|||+.+|..|.++|+++|+.. .++++++.|+++||+.+|||++++++++++|++++|||++|+++|++.+++.
T Consensus 307 tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 386 (424)
T smart00825 307 TGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESP 386 (424)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCc
Confidence 999999999999999999753 3588999999999999999999999999999999999999999999988764
Q ss_pred cccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 399 VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 399 ~~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++..+.++| .++++++|||||||+|+|+||++|
T Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 387 LRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred eEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 2333344444 489999999999999999999987
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-67 Score=508.36 Aligned_cols=375 Identities=21% Similarity=0.264 Sum_probs=312.7
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChh-hhhcCCHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK-LSKRMDKFMLYLLT 98 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~-~~~~~~~~~~l~l~ 98 (433)
..++|||||||+++|.|.+.++||++|++|+++ ...+......++.. .+.+++++.+++++ ..+++++.++|++.
T Consensus 4 ~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~r~~~~a~~ 79 (398)
T PRK06519 4 QPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVH---PLPEIDWSQQIPKRGDQRQMETWQRLGTY 79 (398)
T ss_pred CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCcc---cccccChhhcCCchhhhhccCHHHHHHHH
Confidence 357999999999999999999999999999997 22222111122222 23334444556666 67899999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHH------------HHHH-HhhcccCCCCcccccccchHHH
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA------------IEAL-RISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
++.+||+|||+++. ..+..|+||++|++.++....++. ...+ ....+.++|+.++..++|..++
T Consensus 80 Aa~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~ 156 (398)
T PRK06519 80 AAGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAG 156 (398)
T ss_pred HHHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHH
Confidence 99999999999753 334579999999999987665432 1122 2345568899999999999999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCcc-cc
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRP-WD 244 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~p-fd 244 (433)
++++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++.++.. .++| ||
T Consensus 157 ~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~------~~~p~~d 230 (398)
T PRK06519 157 NISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG------GWAPVWS 230 (398)
T ss_pred HHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC------CCCchhc
Confidence 9999999999999999999999999999999999999999999999998899888999999888743 3445 45
Q ss_pred C---CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 245 I---NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 245 ~---~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
. +++||++|||++++|||++++|++||++||++|+|++. |.. +. +..++.++|++||++||+ ++|||||
T Consensus 231 ~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~--d~~----~~-~~~~~~~am~~AL~~Agl-~~~IdyI 302 (398)
T PRK06519 231 RGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVES--DRA----RR-APGDLEASLERLLKPAGG-LAAPTAV 302 (398)
T ss_pred cCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee--cCC----CC-ChHHHHHHHHHHHHHCCC-cccCCEE
Confidence 4 69999999999999999999999999999999999964 322 11 345789999999999999 8999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCcccc
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLV 401 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 401 (433)
++|||||+.+|..|.++|+++|+ +||+|+|+++||+++|+|+++++.++++|++|++||++|+. |+
T Consensus 303 ~ahgtgT~~~D~~E~~Ai~~~f~----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~---~~------- 368 (398)
T PRK06519 303 ISGATGAHPATAEEKAALEAALA----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS---GE------- 368 (398)
T ss_pred EeCCCCCCCccHHHHHHHHHHcC----CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC---cc-------
Confidence 99999999999999999999995 57999999999999999999999999999999999999972 21
Q ss_pred CCcccccCccEEEEecccccceeeeeEEcc
Q 013946 402 GPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 402 ~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.++..+++.++++++|++|.-.-.+++.
T Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 369 --KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --cCccccccEEEEEeeccCCcceeEEEEe
Confidence 2345567899999999999876666553
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=512.17 Aligned_cols=386 Identities=32% Similarity=0.457 Sum_probs=329.3
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCC-CCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGV-SGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
|++|||||+|+++|.|.+.++||++|++|+ +++++++.++.. ++. ..+.+++|+. .+++++..+++++..+++..+
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 77 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPT-WVGEVVGVEL-PALPAALAAFDCRNNRLALLA 77 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCe-EEEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence 569999999999999999999999999999 999998876543 433 3356766663 346667777888888887777
Q ss_pred HHH---HHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcc-cCCCCcccccccchHHHHHHHHhCCCC
Q 013946 100 GKK---ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYK-KMNPFCVPFATTNMGSAMLAMDLGWMG 175 (433)
Q Consensus 100 a~~---Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~ia~~lgl~G 175 (433)
+.+ |+.+++- ..+.+|+||++|++.++....+.++..+..... ...++.++....+..+.+++..||++|
T Consensus 78 ~~~~~~a~~~~~~------~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 151 (392)
T PRK09185 78 LQQIEPAVEAAIA------RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG 151 (392)
T ss_pred HHHHHHHHHhhcc------cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence 666 5555541 345679999999999998888776665432211 224566677788899999999999999
Q ss_pred CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccc
Q 013946 176 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 255 (433)
Q Consensus 176 p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geG 255 (433)
|+++++++|+|++.||..|+++|++|++|.+||+|+|. .++..+..|..++.++. ..|+|||.+++|+++|||
T Consensus 152 p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~------~~~~Pfd~~~~G~~~gEG 224 (392)
T PRK09185 152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP------QPCRPFSANRDGINIGEA 224 (392)
T ss_pred CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC------CccCCCcCCCCccceece
Confidence 99999999999999999999999999999999999997 55666677777776652 479999999999999999
Q ss_pred eeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHH
Q 013946 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 335 (433)
Q Consensus 256 aaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E 335 (433)
++++|||++ ++.. ++|.|++.++|+.+...+.|++.++.+++++||+++|++++|||||++|||||+.+|..|
T Consensus 225 aa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E 297 (392)
T PRK09185 225 AAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAME 297 (392)
T ss_pred EEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHH
Confidence 999999986 2333 579999999999988888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEE
Q 013946 336 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 336 ~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (433)
..+|.++|+.. +|+++.|+++||+++|||++++++++++|++|++||++|+++|+|+++.++++. +.+++.+|++++
T Consensus 298 ~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 374 (392)
T PRK09185 298 SRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVE-NAQALAIRYVLS 374 (392)
T ss_pred HHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCC-CCccCCCCEEEE
Confidence 99999999864 689999999999999999999999999999999999999999999998776543 455667899999
Q ss_pred ecccccceeeeeEEccC
Q 013946 416 NSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~ 432 (433)
|||||||+|+|+||++-
T Consensus 375 ~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 375 NSFAFGGNNCSLIFGRA 391 (392)
T ss_pred eCccCCceeEEEEEEeC
Confidence 99999999999999874
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=520.88 Aligned_cols=394 Identities=32% Similarity=0.535 Sum_probs=342.9
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCC--CCCCCCC----------CccccccccC---CCCCCC-CChhh
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTSF----------PTKIAAEIKS---FSTDGW-VAPKL 85 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~--~~~~~~~----------~~~~~~~i~~---~~~~~~-i~~~~ 85 (433)
++|+|||||+++|.|.+.++||++|.+|++++++++ +|+...+ .....+.+++ |++..| +++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 80 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE 80 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence 479999999999999999999999999999999885 3443322 3445666665 455544 78999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHH
Q 013946 86 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 86 ~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
.++++++++|+++++.+||+|||++++ +++..++||++|+..+.+ ..........++++.++....+..+.
T Consensus 81 ~~~~~~~~~l~~~aa~~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~ 151 (421)
T cd00833 81 AEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFVGASSSDY------LELLARDPDEIDAYAATGTSRAFLAN 151 (421)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCch---hcCCCCceEEeCcCHHHH------HHHHhhcccccCcccccCcchHHHHH
Confidence 999999999999999999999999876 456789999999986532 22222233346777788888889999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
+++..+|++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|...+.++ +...++|||.
T Consensus 152 ~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~~ 226 (421)
T cd00833 152 RISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPFDA 226 (421)
T ss_pred HHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC-----CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999988888888888887776 4567999999
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
+++|+++|||++++||+++++|+++++++|++|+|++.++++.+.....|+..++.+++++||+++|++++|||||++||
T Consensus 227 ~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hg 306 (421)
T cd00833 227 DADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHG 306 (421)
T ss_pred CCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeC
Confidence 99999999999999999999999999999999999999999876666677888999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc---
Q 013946 326 TSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN--- 398 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~--- 398 (433)
|||+.+|..|.++|.++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|++.++++
T Consensus 307 tgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 386 (421)
T cd00833 307 TGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESP 386 (421)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCC
Confidence 999999999999999999864 3689999999999999999999999999999999999999999999988742
Q ss_pred cccCCcccccC----ccEEEEecccccceeeeeEE
Q 013946 399 VLVGPKKERLE----VKAALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 399 ~~~~~~~~~~~----~~~~l~~s~g~gG~n~~~vl 429 (433)
.++..+.++++ ++++++|+|||||+|+|+||
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 387 LRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred eEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 22333444443 79999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-60 Score=479.96 Aligned_cols=393 Identities=25% Similarity=0.408 Sum_probs=343.5
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCC---Ccccc--ccccCCCCCCC-CChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF---PTKIA--AEIKSFSTDGW-VAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~---~~~~~--~~i~~~~~~~~-i~~~~~~~~~~~~~ 94 (433)
+.+|||+||...+|-..++++||.+|.+|.+-+++-++....++ |.+.+ ..+..||..+| ..+++...|||+.|
T Consensus 10 ~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~R 89 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQLR 89 (2376)
T ss_pred CCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccccCHHHH
Confidence 68999999999999999999999999999998877544222222 33322 23567888887 88999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
|.+++.+||+-||||+|+ +++++++|||+|.+..+.+.. +..+.....-+...+....+.+.+|++.|+++
T Consensus 90 lLLE~t~EAivDaGiNP~---~LRGs~tGv~vg~s~seTs~~------~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq 160 (2376)
T KOG1202|consen 90 LLLEATWEAIVDAGINPD---DLRGSRTGVFVGVSGSETSGA------LSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ 160 (2376)
T ss_pred HHHHHHHHHHHhCCCChh---hcCcccceeEEeecCcccccc------ccCCCccccceeecccHHHHhhcceeEEEecc
Confidence 999999999999999997 789999999999886544321 11122233444555667778899999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
||++.++++|+|++.|+..|++.++.|+||.+||+|+...+.|.....|.++|+++ |++.|+.||...+|+.++|
T Consensus 161 GPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls-----~dGsCkaFDeagnGY~Rse 235 (2376)
T KOG1202|consen 161 GPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS-----PDGSCKAFDEAGNGYCRSE 235 (2376)
T ss_pred CCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC-----CCCcccchhccCCceeecC
Confidence 99999999999999999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
|+++++|.+...|++ +||.|+-..++.||.. .....|+|+.+.+.+++.|+++|+.|+++-|||+|||||+.||+
T Consensus 236 g~~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDp 311 (2376)
T KOG1202|consen 236 GVVAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDP 311 (2376)
T ss_pred ceEEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCCh
Confidence 999999999888864 7999999999999973 44567789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC----ccccCCcccc
Q 013946 334 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT----NVLVGPKKER 407 (433)
Q Consensus 334 ~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~----~~~~~~~~~~ 407 (433)
-|+++|.+.|... .++.|+|+|+|+||++.|||+..+.|.+++|++|.|||++|+..|+|.+.. .+.+-.++.+
T Consensus 312 QEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp 391 (2376)
T KOG1202|consen 312 QEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP 391 (2376)
T ss_pred HHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence 9999999999865 478899999999999999999999999999999999999999999998853 3444456778
Q ss_pred cCccEEEEecccccceeeeeEEcc
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
|+.-++.+|||||||.|+|+||+.
T Consensus 392 ~~GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 392 WRGGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred ccCceeeeeccccCCCceeEEecc
Confidence 888889999999999999999985
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=345.17 Aligned_cols=322 Identities=34% Similarity=0.520 Sum_probs=272.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
+++|++.++++||++||++++ ....+..+||+|++.+...... .........+|+.+.....+..+.+++..+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 83 (332)
T cd00825 11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPRFQV----FGADAMRAVGPYVVTKAMFPGASGQIATPL 83 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHHHHh----hhhccccccCcchhhcccchHHHHHHHHHh
Confidence 578999999999999999832 2233455999999876653221 123334567888888888889999999999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
|++||+++++.+|+|++.||..|.++|++|++|.+||+++|....+.....+...+.+ .|+..++||+...+|++
T Consensus 84 gl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 84 GIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS-----TPEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc-----CCCCCCCCCCCCCCCEE
Confidence 9999999999999999999999999999999999999999986655543322222222 36678899999999999
Q ss_pred cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG 331 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~ 331 (433)
+|||++++||++.+.|++++.+++++|.+++...++.+...+.+....+.++++++|+++|++++||||+++|+++++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 99999999999999999999999999999999888776655566778899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCcc
Q 013946 332 DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVK 411 (433)
Q Consensus 332 D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (433)
|..|.+++...++.. ++++.+.|..+||+.+|+++++++.++++++++.+||+.|+.++++.. .. +..+.++.+.+
T Consensus 239 ~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~--~~-~~~~~~~~~~~ 314 (332)
T cd00825 239 DVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG--LN-IVTETTPRELR 314 (332)
T ss_pred CHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc--Cc-ccCCCCCCCCC
Confidence 999999999988754 578899999999999999999999999999999999999999988832 22 23344555679
Q ss_pred EEEEecccccceeeeeEE
Q 013946 412 AALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 412 ~~l~~s~g~gG~n~~~vl 429 (433)
+++++++|+||+++++||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=342.72 Aligned_cols=316 Identities=19% Similarity=0.168 Sum_probs=246.8
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+++|+|+|+|+++|.|.+.++.|++|+.|.+.+.....++........... .+..+.....++..+|+..|+
T Consensus 2 ~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~r~~~La~~Al 73 (348)
T PRK06147 2 MRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAP--------VPLPPPWRGPERLAEMAAPAI 73 (348)
T ss_pred CCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeec--------CcCCcccCchHHHHHHHHHHH
Confidence 567999999999999999999999999998877554433321010000100 011111223457789999999
Q ss_pred HHHHHhCC-CCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC--CCCc
Q 013946 101 KKALADGG-ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPN 177 (433)
Q Consensus 101 ~~Al~dAg-l~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~ 177 (433)
++||++++ +++ .++.+|++.+..+ ....+. ...+..+..++..+|+ ++++
T Consensus 74 ~~aL~~a~~~~~--------~~i~lil~~~~~~---------------~~~~~~----~~~~~~~~~~~~~lG~~~~~~~ 126 (348)
T PRK06147 74 AEALEGLPALDA--------SEAPLLLCVAEEE---------------RPGRPP----DLEERLLRELEARLGLRLEPGS 126 (348)
T ss_pred HHHHHhcccccc--------cCCcEEEEeCchh---------------cCCCCc----chHHHHHHHHHHHhCCCCCCCc
Confidence 99999998 454 3456777654310 000111 1122335667888887 5788
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|+.|++|.+||||+|.+..+..+..|...+.+.. +.+++|+++||||+
T Consensus 127 ~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~------------~~~~~G~v~GEGA~ 194 (348)
T PRK06147 127 AVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT------------SQNSNGFIPGEAAA 194 (348)
T ss_pred ccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC------------CCCCCceeeeceEE
Confidence 999999999999999999999999999999999999888777777776655431 24689999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 336 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~ 336 (433)
++|||+.++|++++.+||+ .|++...++.+... ..+++.++.++|+++|+++|++++|||||++|++||+.+|..|.
T Consensus 195 a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~ 272 (348)
T PRK06147 195 AVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAA 272 (348)
T ss_pred EEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHH
Confidence 9999999999999999998 67777666654432 22378899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCC
Q 013946 337 QALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPN 385 (433)
Q Consensus 337 ~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 385 (433)
.++.++|+.. ...+++++|+++||+++|+|+++++.++++|++|++|+.
T Consensus 273 ~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~ 322 (348)
T PRK06147 273 LAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP 322 (348)
T ss_pred HHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 9999999864 357899999999999999999999999999999998654
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=309.67 Aligned_cols=235 Identities=41% Similarity=0.672 Sum_probs=183.7
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCC-CCCCCCC---CccccccccC----------CCCCCC-CChhh
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSF---PTKIAAEIKS----------FSTDGW-VAPKL 85 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~-~~~~~~~---~~~~~~~i~~----------~~~~~~-i~~~~ 85 (433)
|++|+|||||+++|.|.+.++||++|++|++++++++ +|+...+ +....+.++. |+...+ +++++
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE 80 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence 5799999999999999999999999999999999887 5666555 4455555554 333332 55667
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCC-eeEEEEeccCCchHHHHHHHHHH-Hhh--cccCCCCcccccccc
Q 013946 86 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS-KCGVLIGSGLGGMKVFYDAIEAL-RIS--YKKMNPFCVPFATTN 161 (433)
Q Consensus 86 ~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~-~~gv~~g~~~g~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 161 (433)
.++|+++++|++.++.+||+|||++++. ++.. |+||++|++.+.+ +.+..+ ... ....+|..++..+.|
T Consensus 81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~~---~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 81 ARRMDRQSRLALAAAREALEDAGLDPDD---LDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp HHTS-HHHHHHHHHHHHHHHHHTSTGGG---HTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred hhhhhhhhhHHHHHhhhhcccccccccc---cccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence 7899999999999999999999998753 3344 5999999998833 222233 222 345566445556899
Q ss_pred hHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCc
Q 013946 162 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 241 (433)
Q Consensus 162 ~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 241 (433)
..+++|++.||++||+++++++|+||+.||..|+++|++|++|+|||||+|..+++..+..|..++.++. ++.++
T Consensus 154 ~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~-----~~~~~ 228 (254)
T PF00109_consen 154 SAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSA-----DGPCR 228 (254)
T ss_dssp HHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-T-----TSGGG
T ss_pred ccccchhhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999998899999999999998873 35799
Q ss_pred cccCCCCCcccccceeEEEecchHHH
Q 013946 242 PWDINRDGFVMGEGAGVLLLEELEHA 267 (433)
Q Consensus 242 pfd~~~~G~~~geGaaalvL~~~~~A 267 (433)
|||.+++|+++|||++++|||++++|
T Consensus 229 pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 229 PFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp STBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred ccCCCCCCEEEECceEEEEEEEhhhC
Confidence 99999999999999999999999876
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=254.48 Aligned_cols=247 Identities=33% Similarity=0.512 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++++ +|+++++.++. ..+..+.+++..+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-------~li~~~~~~~~-------------------------~~~~~a~~i~~~l 54 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-------GVIVGTTGGSG-------------------------EFSGAAGQLAYHL 54 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-------EEEEEECCCCc-------------------------cccHHHHHHHHHh
Confidence 578999999999999999988777 89999875321 1355678999999
Q ss_pred CC-CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GW-MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl-~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|+ ++|+++++++|+|++.||..|+++|++|++|.+||+++|. +
T Consensus 55 g~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~------------------------------------~ 98 (254)
T cd00327 55 GISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------------F 98 (254)
T ss_pred CCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce------------------------------------e
Confidence 99 8999999999999999999999999999999999999986 5
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++|||++++||++.+.+.+++.+++++|.++....++.... +.+......++++++|+++|++++|||++++|+++++.
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 68999999999999999999999999999998876655332 34566788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCc
Q 013946 331 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEV 410 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (433)
.|..|.+.....++.. .+++.+.+..+||+.+|++++.+..++++++.+.+||. +.+.
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~~~~ 235 (254)
T cd00327 178 GDAVELALGLDPDGVR-SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------PREP 235 (254)
T ss_pred ccHHHHHHHHHHhCCC-CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------CCCc
Confidence 9999988877666543 47889999999999999999999999999999999881 1234
Q ss_pred cEEEEecccccceeeeeEE
Q 013946 411 KAALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 411 ~~~l~~s~g~gG~n~~~vl 429 (433)
+.++++++|+||++.++||
T Consensus 236 ~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 236 RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CEEEEeeEcCCCcceEEEC
Confidence 6789999999999999985
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=233.02 Aligned_cols=269 Identities=21% Similarity=0.297 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| .|++|+.... ....+ .+..++..+|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID-------~vi~g~~~~~------------------------~~~~~-~a~~va~~lG 74 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD-------EVILGQVLTA------------------------GAGQN-PARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCC------------------------CCCCc-HHHHHHHHcC
Confidence 56899999999999999999888 8999875310 01112 4567889999
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh---------------hh--------------
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---------------GL-------------- 220 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~---------------~~-------------- 220 (433)
+. -|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |+ .+
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 96 389999999999999999999999999999999999996532 10 00
Q ss_pred --HHHHHhhhhhcCCC-------------------CCCCCC-c---cccC------------------------------
Q 013946 221 --GGFVACRALSQRNN-------------------DPTKAS-R---PWDI------------------------------ 245 (433)
Q Consensus 221 --~~~~~~~~ls~~~~-------------------~~~~~~-~---pfd~------------------------------ 245 (433)
.++...+.+.+++. .|.+.. . |+..
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 00000000000000 011110 0 1100
Q ss_pred --CCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 246 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 246 --~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
..+|.+ ++|||+++||++++.|++++.+++++|+|++... ..|.+.+.+...+++++|+++|++++
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~-----~~~~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAG-----VDPAIMGIGPVSATRRCLDKAGWSLA 309 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEec-----CCCcccchhHHHHHHHHHHHcCCCHH
Confidence 012334 8999999999999999999999999999998764 23444556778999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
|||++|+|++ +..|..++.+.|+.. .++++++.|..+||++||+|+..++.++++|+.
T Consensus 310 dId~~e~~d~-----f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~---------------- 368 (393)
T PRK05656 310 ELDLIEANEA-----FAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---------------- 368 (393)
T ss_pred HCCEEEecCc-----cHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH----------------
Confidence 9999999976 457888888888753 468899999999999999999999999998863
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
...|+++++...-||.-.++||++
T Consensus 369 ------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 ------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred ------------cCCCEEEEEEcccCcceEEEEEec
Confidence 124788888888999999999985
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=228.97 Aligned_cols=289 Identities=22% Similarity=0.308 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+++++||+|+|+++++|| ++++|+..++... .....+..++..+
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id-------~vi~g~~~~~~~~-----------------------~~~~~a~~va~~l 71 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID-------AMYVGNMSAGLFV-----------------------SQEHIAALIADYA 71 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc-----------------------ccccHHHHHHHHc
Confidence 367899999999999999998887 8888875422100 0122467789999
Q ss_pred CCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh--------------------h-----hHHHHH
Q 013946 172 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI--------------------G-----LGGFVA 225 (433)
Q Consensus 172 gl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~--------------------~-----~~~~~~ 225 (433)
|++ .|+++|+++|+|++.||..|+++|++|++|++||+|.|.+.... . ..++..
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 998 59999999999999999999999999999999999998532100 0 000000
Q ss_pred hhhhhcCC------------------CCCCCC----------------CccccCCCCCcccccceeEEEecchHHHHhcC
Q 013946 226 CRALSQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKRG 271 (433)
Q Consensus 226 ~~~ls~~~------------------~~~~~~----------------~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g 271 (433)
...+.+++ .+|... +.|+. ..+...++|||+++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhc
Confidence 11111110 012111 11222 23666889999999999999999987
Q ss_pred CeEEEEEEEeeeccCCCCCCCC-C-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-------
Q 013946 272 AKIYAEFRGGSFTSDAYHMTEP-H-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC------- 342 (433)
Q Consensus 272 ~~i~a~i~g~~~~~d~~~~~~~-~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~------- 342 (433)
.++ ++|+|++...+..+.... + +.......+++++|+++||+++|||++|+|++++. .+.++.+++.-.
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lgl~~~G~~~~ 308 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLGFAKKGEGGK 308 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcCCCCCCchHH
Confidence 554 589999988776644321 1 23456778999999999999999999999999996 455555555311
Q ss_pred -HcC-----CCCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEE
Q 013946 343 -FGQ-----NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414 (433)
Q Consensus 343 -~~~-----~~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (433)
+.+ ...+|++..++. +||+.+++|+.++++++++|+.+-- ....|-...++++
T Consensus 309 ~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~-------------------~g~rqv~~a~~~l 369 (389)
T PRK06064 309 LAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE-------------------KGRQQVIGAGYGL 369 (389)
T ss_pred HHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC-------------------CCCccCCCccEEE
Confidence 111 124677777776 5999999999999999999997310 0111222467889
Q ss_pred Eeccc-ccceeeeeEEccC
Q 013946 415 SNSFG-FGGHNSSIIFSPY 432 (433)
Q Consensus 415 ~~s~g-~gG~n~~~vl~~~ 432 (433)
++++| .+..++.+||++.
T Consensus 370 ~~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 370 THNVGGTGHTAVVHILSRK 388 (389)
T ss_pred EecCCCccceEEEEEEEec
Confidence 88887 3456667777764
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=227.61 Aligned_cols=270 Identities=22% Similarity=0.328 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|+|+++++|| ++++|+..... .....+..++..+
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-------~vi~~~~~~~~-------------------------~~~~~a~~v~~~l 69 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-------DVIMGNVLQAG-------------------------EGQNPARQAALLA 69 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 477999999999999999999888 88888653211 0122355788999
Q ss_pred CCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh----------------------hh------
Q 013946 172 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI----------------------GL------ 220 (433)
Q Consensus 172 gl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~----------------------~~------ 220 (433)
|++. |+++|+++|+|++.+|..|+.+|++|++|.+||+|+|.+.. +. .+
T Consensus 70 Gl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (386)
T cd00751 70 GLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTG 149 (386)
T ss_pred CCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCC
Confidence 9974 89999999999999999999999999999999999886421 10 00
Q ss_pred --HHHHHhhhhhcCC--------------------CC-----------------------CCCCCc------------c-
Q 013946 221 --GGFVACRALSQRN--------------------ND-----------------------PTKASR------------P- 242 (433)
Q Consensus 221 --~~~~~~~~ls~~~--------------------~~-----------------------~~~~~~------------p- 242 (433)
.++.....+.+++ .+ |+...| |
T Consensus 150 ~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i 229 (386)
T cd00751 150 LSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPA 229 (386)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCC
Confidence 0000001100000 00 111111 1
Q ss_pred cc-----CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 243 WD-----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 243 fd-----~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
|+ ...+...++||++++||++++.|++++.+++++|+|++.+.+... +...+...+++++|+++||+|+|
T Consensus 230 ~~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~d 304 (386)
T cd00751 230 FKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDD 304 (386)
T ss_pred cCCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHH
Confidence 11 124566789999999999999999999999999999998866432 23345679999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
||++|+|++++. .|... .+.|+-. .+++++..+..+||+.+|+|+.++++++++|+..
T Consensus 305 id~~e~~d~f~~----~~~~~-~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~---------------- 363 (386)
T cd00751 305 IDLIEINEAFAA----QALAC-LKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------- 363 (386)
T ss_pred cCEEEeechhHH----HHHHH-HHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc----------------
Confidence 999999988763 33333 3445532 2577888888999999999999999999999861
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++..+-||..+++||++
T Consensus 364 ------------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 ------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred ------------CCCEEEEEEcccccceEEEEEEC
Confidence 24788999999999999999984
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=224.04 Aligned_cols=269 Identities=22% Similarity=0.268 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|+|+++++|| ++++++..... .....+..++..+
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~l 68 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID-------DVIFGNVLQAG-------------------------EQQNIARQAALLA 68 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 477999999999999999999888 88887643110 0012355688889
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-h----------h------------------
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G----------L------------------ 220 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~----------~------------------ 220 (433)
|+. .|++.|+++|+|++.+|..|+++|++|++|.+||+|+|.+.... . .
T Consensus 69 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (386)
T TIGR01930 69 GLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPL 148 (386)
T ss_pred CCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccc
Confidence 986 38999999999999999999999999999999999988632110 0 0
Q ss_pred ----HHHHHhhhhhcCCC------------------C-----------CC--------------C-CCcccc--------
Q 013946 221 ----GGFVACRALSQRNN------------------D-----------PT--------------K-ASRPWD-------- 244 (433)
Q Consensus 221 ----~~~~~~~~ls~~~~------------------~-----------~~--------------~-~~~pfd-------- 244 (433)
.++...+.+.+++. + |. . ..+|.+
T Consensus 149 ~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~ 228 (386)
T TIGR01930 149 NGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLK 228 (386)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCC
Confidence 00000001111100 0 21 0 111111
Q ss_pred ---------CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 013946 245 ---------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 315 (433)
Q Consensus 245 ---------~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~ 315 (433)
...+...++|||+++||++++.|++++.+++++|+|++.... .+.+...+..++++++|+++|++|
T Consensus 229 ~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 303 (386)
T TIGR01930 229 PAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSI 303 (386)
T ss_pred CCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCH
Confidence 123555679999999999999999999999999999988743 222333456789999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||++++|.+.+. .|.. ..+.|+- ..++++++.+..+||+.+|+|+.++++++++|+..
T Consensus 304 ~did~~e~~d~fa~----~~~~-~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~-------------- 364 (386)
T TIGR01930 304 SDIDLFEINEAFAA----QVLA-CIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR-------------- 364 (386)
T ss_pred HHCCeeehcchhHH----HHHH-HHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 99999999988873 3333 3344543 23678888889999999999999999999999862
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.++++++..+.||..+++||+
T Consensus 365 --------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 --------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred --------------CCCEEEEEEeccCCceEEEEeC
Confidence 2468888888889998988885
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=222.53 Aligned_cols=269 Identities=20% Similarity=0.286 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.++.+++|+++|+++++|| .|++|+..... .....+..++...|
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id-------~vv~G~~~~~~-------------------------~g~~~~r~~~~~~G 75 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVN-------EVILGQVITGG-------------------------SGQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCccc-------------------------cccHHHHHHHHHCC
Confidence 45888999999999999999888 89999764211 11234566778899
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------hHH--------HHH--------
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------LGG--------FVA-------- 225 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------~~~--------~~~-------- 225 (433)
+. + |+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. |.. +.. +..
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 96 3 99999999999999999999999999999999999997642 210 000 000
Q ss_pred -hh-----hhhcCCC------------------CCCCC-------------------------C------------c-cc
Q 013946 226 -CR-----ALSQRNN------------------DPTKA-------------------------S------------R-PW 243 (433)
Q Consensus 226 -~~-----~ls~~~~------------------~~~~~-------------------------~------------~-pf 243 (433)
++ .+.+++. +|... . + .|
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 00 0000000 00000 0 0 11
Q ss_pred cC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 013946 244 DI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 244 d~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dI 318 (433)
+. ..+...++|||+++||++++.|++++.+++++|+|++...+. +...+.+...++++||+++|++|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD-----PSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC-----cchhchHHHHHHHHHHHHcCCCHHHc
Confidence 11 112356799999999999999999999999999999987542 22233556789999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHc-CCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFG-QNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~-~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
|++|.|...+. .|+..+ +.++ ...++++++.|..+||++||+|+++++.++++|++.
T Consensus 311 D~~ei~dafa~----~~l~~~-~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~----------------- 368 (392)
T PRK06633 311 EVIEVNEAFAA----QSIYVN-REMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA----------------- 368 (392)
T ss_pred CeeehhhHHHH----HHHHHH-hhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 99998843321 111111 1222 123688999999999999999999999999999750
Q ss_pred ccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 398 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++.+...-||.-.++||++
T Consensus 369 -----------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 -----------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred -----------CCCeEEEEEecccChhheEEEEe
Confidence 13567777778888888899886
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-26 Score=222.40 Aligned_cols=271 Identities=21% Similarity=0.275 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|||+++++|| ++++|+..... .....+..++..+
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID-------~vi~g~~~~~~-------------------------~~~~~~~~~~~~~ 73 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVD-------EVIMGQVLQAG-------------------------AGQNPARQAALKA 73 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------eEEEEEecCCC-------------------------CCCcHHHHHHHHc
Confidence 367899999999999999999888 88888753100 0111233355667
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------------h----
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------------L---- 220 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------------~---- 220 (433)
|+. .|.++++++|+|++.||..|+++|++|++|++||+|+|.+..... +
T Consensus 74 gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK05790 74 GLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFN 153 (393)
T ss_pred CCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccC
Confidence 775 489999999999999999999999999999999999986421000 0
Q ss_pred ---HHHHHhhhhhcCCC--------------------------------------------CCCCCCc------c-----
Q 013946 221 ---GGFVACRALSQRNN--------------------------------------------DPTKASR------P----- 242 (433)
Q Consensus 221 ---~~~~~~~~ls~~~~--------------------------------------------~~~~~~~------p----- 242 (433)
.++...+.+.+++. +++...+ |
T Consensus 154 ~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 154 GYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCC
Confidence 00000001110000 0000000 1
Q ss_pred --ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 013946 243 --WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 315 (433)
Q Consensus 243 --fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~ 315 (433)
||. ..+...++|||+++||++++.|++++.+++++|+|++..... +.....+...+++++|+++|+++
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~ 308 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVD-----PAIMGIGPVPAIRKALEKAGWSL 308 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCC-----CCccchhHHHHHHHHHHHcCCCH
Confidence 111 015667899999999999999999998999999999987432 22223456789999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||++|+|+..+. .++.. .+.|+- ..++++++.+..+||+.||+|+.++++++.+|+..
T Consensus 309 ~did~~e~~d~f~~----~~l~~-~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~-------------- 369 (393)
T PRK05790 309 ADLDLIEINEAFAA----QALAV-EKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR-------------- 369 (393)
T ss_pred HHCCEEEeCcHHHH----HHHHH-HHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc--------------
Confidence 99999999876553 22222 334542 23688899999999999999999999999999862
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..|+++++..+-+|..+++||++.
T Consensus 370 --------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 --------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred --------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 237889999999999999999863
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=219.29 Aligned_cols=271 Identities=22% Similarity=0.303 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .|++|+..... ......+..++...|
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID-------~vi~g~~~~~~------------------------~~~~~~a~~~~~~~G 76 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG-------HVVFGHVIPTE------------------------PRDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeeecccc------------------------CCCccHHHHHHHHcC
Confidence 56889999999999999999888 88998764211 001123445667778
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh----------------hH----HHHH-----
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG----------------LG----GFVA----- 225 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~----------------~~----~~~~----- 225 (433)
+. -|+++|+++|+|++.|+..|+++|++|.+|++||+|+|.+..... +. .+..
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 499999999999999999999999999999999999997542110 00 0000
Q ss_pred -hh-----hhhcC--------------------C-----------------------CCCCCCCc------------ccc
Q 013946 226 -CR-----ALSQR--------------------N-----------------------NDPTKASR------------PWD 244 (433)
Q Consensus 226 -~~-----~ls~~--------------------~-----------------------~~~~~~~~------------pfd 244 (433)
++ .+.++ + .+|+...| |+.
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 00 00000 0 02333222 332
Q ss_pred C-------CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 245 I-------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 245 ~-------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
. ..+...++|||+++||++++.|++++.+++++|+|++..... +.....+...+++++|+++|++++|
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~agi~~~d 311 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVD-----PEYMGIGPVPATQKALERAGLTVAD 311 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CCcccccHHHHHHHHHHHcCCCHHH
Confidence 1 123445689999999999999999999999999999987532 2233446688999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
||++|+|+..+ .+..+..+.|+-. .++++++.+..+||++||+|+..++.++.+|+++
T Consensus 312 id~~ei~d~f~-----~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~---------------- 370 (394)
T PRK09051 312 LDVIEANEAFA-----AQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI---------------- 370 (394)
T ss_pred cCEEEecCccH-----HHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999997644 5666666777743 3567777777899999999999999999999751
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++++...-||.-.++||++.
T Consensus 371 ------------~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 371 ------------GGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred ------------CCCEEEEEEccccChhhEEEEEeC
Confidence 235778888888899999999863
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=217.60 Aligned_cols=270 Identities=21% Similarity=0.293 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+.+|+++||+++ |+++++|| .||+|+..... ......+..+...+
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID-------~vi~g~~~~~~------------------------~~~~~~ar~~~~~~ 80 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE-------DAIVGCAMPEA------------------------EQGLNVARIGALLA 80 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC-------EEEEEecCCCC------------------------CCCchHHHHHHHHc
Confidence 568899999999997 99999888 89999764210 00122233355566
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh------h-----h-----------HHHHHhh
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI------G-----L-----------GGFVACR 227 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~------~-----~-----------~~~~~~~ 227 (433)
|+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... . + .++....
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 885 37999999999999999999999999999999999999653211 0 0 0000000
Q ss_pred hhhcCC-----------------------------CCCCCC--C------------cc----------------------
Q 013946 228 ALSQRN-----------------------------NDPTKA--S------------RP---------------------- 242 (433)
Q Consensus 228 ~ls~~~-----------------------------~~~~~~--~------------~p---------------------- 242 (433)
.+.+++ ..|... . .|
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 000000 001100 0 00
Q ss_pred -ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 243 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 243 -fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|+. ..+...++|||+++||++++.|++++.+++++|+|++..... |.+.+.+...++++||+++|++++
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~A~~~al~~Agi~~~ 315 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVP-----PEIMGIGPIEAIPAALKQAGLKQD 315 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccC-----CCccchhHHHHHHHHHHHcCCCHH
Confidence 110 123366899999999999999999999999999999987532 333444678999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchh--hhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
|||++|+|+..+ .+..+..+.|+-. ..+++..++ .+||+.||+|+++++.++++|+++
T Consensus 316 did~~ei~D~f~-----~~~l~~~e~lg~~-~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~-------------- 375 (399)
T PRK09052 316 DLDWIELNEAFA-----AQSLAVIRDLGLD-PSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT-------------- 375 (399)
T ss_pred HcCEEEeCcHHH-----HHHHHHHHHhCCC-CcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc--------------
Confidence 999999774433 2333444566643 245666666 679999999999999999999861
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++++..+-||.-.++||+++
T Consensus 376 --------------~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 376 --------------NLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred --------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 135778888888999999999864
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=218.30 Aligned_cols=283 Identities=18% Similarity=0.188 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|||+++++|| ++++|+.... ......+..++..+
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~l 68 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE-------LVVVGSTAYR-------------------------GIELYPAPIVAEYS 68 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc-------------------------cccCChHHHHHHHh
Confidence 357999999999999999999888 8888875310 00122356788999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-h-------------------------hHHHH
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G-------------------------LGGFV 224 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~-------------------------~~~~~ 224 (433)
|+++ +.++|+++|+|++.||..|+++|++|++|.+||+|+|.+.... . +..+.
T Consensus 69 Gl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~ 148 (385)
T PRK12578 69 GLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALY 148 (385)
T ss_pred CCCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHH
Confidence 9976 7789999999999999999999999999999999998643210 0 00010
Q ss_pred HhhhhhcCC------------------CCCCCCC----------------ccccCCCCCcccccceeEEEecchHHHHhc
Q 013946 225 ACRALSQRN------------------NDPTKAS----------------RPWDINRDGFVMGEGAGVLLLEELEHAKKR 270 (433)
Q Consensus 225 ~~~~ls~~~------------------~~~~~~~----------------~pfd~~~~G~~~geGaaalvL~~~~~A~~~ 270 (433)
....+.+++ .+|.... .|+ ...+...++|||+++||++++.|++.
T Consensus 149 a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l 227 (385)
T PRK12578 149 ATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKEL 227 (385)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhc
Confidence 111111110 1122111 122 12356678999999999999999988
Q ss_pred CCeEEEEEEEeeeccCCCCCC-CCCCCh-HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHH-cC--
Q 013946 271 GAKIYAEFRGGSFTSDAYHMT-EPHPDG-VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF-GQ-- 345 (433)
Q Consensus 271 g~~i~a~i~g~~~~~d~~~~~-~~~~~~-~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~-~~-- 345 (433)
+.+++++|+|++...+..+.. .++... .+...++++||+++|++++|||++|+|++++. .|...++.+- ..
T Consensus 228 ~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le~lGl~~~G 303 (385)
T PRK12578 228 KIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYEDLGFTEKG 303 (385)
T ss_pred CCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCC
Confidence 866678999999887765432 222222 35678999999999999999999999999985 6777665431 11
Q ss_pred -------------CCCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCc
Q 013946 346 -------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEV 410 (433)
Q Consensus 346 -------------~~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (433)
...+|++..-+. .||+.||+|+.++++++++|+... ..+..+...
T Consensus 304 ~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~a--------------------g~~qv~~~~ 363 (385)
T PRK12578 304 KGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEA--------------------GKLQQPLKK 363 (385)
T ss_pred chHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCc--------------------ccCcCCcch
Confidence 012455555554 499999999999999999998621 001111124
Q ss_pred cEEEEeccc-ccceeeeeEEcc
Q 013946 411 KAALSNSFG-FGGHNSSIIFSP 431 (433)
Q Consensus 411 ~~~l~~s~g-~gG~n~~~vl~~ 431 (433)
+++++.+.| .|..+..+||++
T Consensus 364 ~~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 364 YIGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred heEEEeccCcchhhEEEEEEeC
Confidence 688888887 554566666653
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=193.19 Aligned_cols=115 Identities=39% Similarity=0.608 Sum_probs=98.1
Q ss_pred EEEEEEeeeccCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC---CCcc
Q 013946 275 YAEFRGGSFTSDA-YHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLR 350 (433)
Q Consensus 275 ~a~i~g~~~~~d~-~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~---~~~~ 350 (433)
|++|+|+++++|+ .+...+.|++.++.++|++||+++|++|+|||||++||+||+.+|..|.++|.++|+.. .+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 7899999999999 78888899999999999999999999999999999999999999999999999999875 3599
Q ss_pred cccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCC
Q 013946 351 VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389 (433)
Q Consensus 351 v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 389 (433)
|++.|+++||++++||++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999975
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-25 Score=215.70 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+++|+.+++|| .+++|+...+. ......+..++..+|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID-------~vi~g~~~~~~------------------------~~g~~~a~~~~~~lG 76 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID-------DLIIGCAMPEA------------------------EQGLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC-------EEEEEeccccc------------------------cccchHHHHHHHHcC
Confidence 56889999999999998777777 78998653110 001223556888999
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-----------------hh---HHHHHhhhhh
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----------------GL---GGFVACRALS 230 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-----------------~~---~~~~~~~~ls 230 (433)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... .+ .++.....+.
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~ 156 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAV 156 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHH
Confidence 97 39999999999999999999999999999999999999754211 00 0110111111
Q ss_pred cCCC------------------CCCC----------------------------------CC------------cc-cc-
Q 013946 231 QRNN------------------DPTK----------------------------------AS------------RP-WD- 244 (433)
Q Consensus 231 ~~~~------------------~~~~----------------------------------~~------------~p-fd- 244 (433)
+++. +|.. .. +| |.
T Consensus 157 ~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~ 236 (391)
T PRK07661 157 KYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV 236 (391)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCC
Confidence 0000 0000 00 11 10
Q ss_pred ----CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 013946 245 ----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320 (433)
Q Consensus 245 ----~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~ 320 (433)
...+...++|||+++||++++.|++++.+++++|+|++..... +.+.+.+...+++++|+++||+++|||+
T Consensus 237 ~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~ 311 (391)
T PRK07661 237 KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVP-----PEVMGIGPIAAIPKALKLAGLELSDIGL 311 (391)
T ss_pred CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCC-----CcccchHHHHHHHHHHHHcCCCHHHCCE
Confidence 1234556799999999999999999999999999999988542 2233446789999999999999999999
Q ss_pred EEeccCCCCCCCHHHHHHHH--HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 321 INAHATSTPAGDIKEYQALI--HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 321 v~~h~~gt~~~D~~E~~al~--~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
||.| |..+...+. +.|+-. .++++++.+..+||+.||+|+.+++.++.+|+++
T Consensus 312 ~ei~-------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~----------------- 367 (391)
T PRK07661 312 FELN-------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR----------------- 367 (391)
T ss_pred EEeC-------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 9976 555555554 345532 4678889999999999999999999999999750
Q ss_pred ccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 398 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++.+..+-||.-.++||++
T Consensus 368 -----------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 -----------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred -----------CCCeEEEEEccccChhhEEEEEe
Confidence 23577888888889999999886
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=213.61 Aligned_cols=286 Identities=23% Similarity=0.312 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| +|++|+...+.. ..... .+..+...++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId-------~vi~g~~~~~~~---------------------~~~~~--~~~~~~~~~g 72 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD-------GIFLGHFNAGFS---------------------PQDFP--ASLVLQADPA 72 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCcc---------------------ccccc--hhHHHHHhcC
Confidence 56899999999999999999888 899987532110 00000 1112334456
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh----------------------h---HHHHHh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG----------------------L---GGFVAC 226 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~----------------------~---~~~~~~ 226 (433)
++. |.++|+++|+|++.||..|+++|++|++|++||+|+|.+..... + .++...
T Consensus 73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 152 (389)
T PRK07516 73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQ 152 (389)
T ss_pred CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHH
Confidence 654 89999999999999999999999999999999999987432100 0 000000
Q ss_pred hhhhcC------------------CCCCCCC--------------------CccccCCCCCcccccceeEEEecchHHHH
Q 013946 227 RALSQR------------------NNDPTKA--------------------SRPWDINRDGFVMGEGAGVLLLEELEHAK 268 (433)
Q Consensus 227 ~~ls~~------------------~~~~~~~--------------------~~pfd~~~~G~~~geGaaalvL~~~~~A~ 268 (433)
+.+.++ ..+|... ..|+. ..+...++|||+++||++++.|+
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~-~~d~~~~~DGAaa~il~s~~~a~ 231 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLR-RTDCSLVSDGAAALVLADAETAR 231 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCc-hhhcCCcCcceEEEEEecHHHHH
Confidence 011110 0112211 11221 24566789999999999999998
Q ss_pred hcCCeEEEEEEEeeeccCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH-------
Q 013946 269 KRGAKIYAEFRGGSFTSDAYHMTEPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI------- 340 (433)
Q Consensus 269 ~~g~~i~a~i~g~~~~~d~~~~~~~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~------- 340 (433)
+.+. +++|+|++...+..+....++ ...+...+++++|+++||+|+|||++|+|++++.. ...+.++|.
T Consensus 232 ~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~ 308 (389)
T PRK07516 232 ALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQG 308 (389)
T ss_pred hcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCch
Confidence 8753 578999998877655433333 34667789999999999999999999999999973 333334432
Q ss_pred -HHHcC-----CCCcccccchh--hhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccE
Q 013946 341 -HCFGQ-----NRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412 (433)
Q Consensus 341 -~~~~~-----~~~~~v~s~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (433)
+.+.+ ...+|++...+ .+||+.||+|+.+++++++||+... ...+-.+.++
T Consensus 309 ~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~~a~~ 367 (389)
T PRK07516 309 ARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIPGAKL 367 (389)
T ss_pred HHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCCchhe
Confidence 11111 01245544222 4699999999999999999998721 1112224678
Q ss_pred EEEeccc-ccceeeeeEEccCC
Q 013946 413 ALSNSFG-FGGHNSSIIFSPYK 433 (433)
Q Consensus 413 ~l~~s~g-~gG~n~~~vl~~~~ 433 (433)
+++++.| .+.+++.+||++++
T Consensus 368 ~l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 368 AGVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred eeeeccCcccceEEEEEEEecC
Confidence 8888877 55556667777753
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=215.46 Aligned_cols=274 Identities=16% Similarity=0.245 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|+|+++++|| .|++|+..... ......+..++.++
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID-------~vv~G~~~~~~------------------------~~~~~~~r~~a~~~ 119 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVG-------DIVVGTVLAPG------------------------SQRANECRMAAFYA 119 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCcc------------------------cccchHHHHHHHHC
Confidence 367999999999999999999888 88988753211 00112234577788
Q ss_pred CCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-h--------h------------HHHHHhhh
Q 013946 172 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G--------L------------GGFVACRA 228 (433)
Q Consensus 172 gl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~--------~------------~~~~~~~~ 228 (433)
|+.. |.++|+.+|+||+.|+..|+++|++|.+|++||+|+|.+.... . + .++.....
T Consensus 120 Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y 199 (452)
T PLN02287 120 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENV 199 (452)
T ss_pred CCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHH
Confidence 9964 8899999999999999999999999999999999998753211 0 0 00000001
Q ss_pred hhcCC------------------CCCCC-CC------------------------------------------cc-ccC-
Q 013946 229 LSQRN------------------NDPTK-AS------------------------------------------RP-WDI- 245 (433)
Q Consensus 229 ls~~~------------------~~~~~-~~------------------------------------------~p-fd~- 245 (433)
+.+++ .+|.. .. +| |+.
T Consensus 200 ~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~ 279 (452)
T PLN02287 200 AERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKN 279 (452)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCC
Confidence 11000 01110 00 00 110
Q ss_pred ----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 246 ----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 246 ----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
..+...++|||+++||++++.|++++.+|++++.+++... ..+.+.+.+...+++++|+++||+++|||++
T Consensus 280 g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~ 354 (452)
T PLN02287 280 GTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLF 354 (452)
T ss_pred CCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 1355668999999999999999999999999999977442 1234445567899999999999999999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
|.|...+. .|+..++. |+- ..++++++.+..+||++||+|+.+++.++.+|++.
T Consensus 355 Ei~daFa~----~~l~~~e~-lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~-------------------- 409 (452)
T PLN02287 355 EINEAFAS----QFVYCCKK-LGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR-------------------- 409 (452)
T ss_pred EecchHHH----HHHHHHHH-cCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence 99966553 34433332 332 24688899999999999999999999999999751
Q ss_pred cCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 401 VGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
...-++++.+...-||.-.++||++.
T Consensus 410 ------~~~~~~gl~~~c~ggG~g~a~~ie~~ 435 (452)
T PLN02287 410 ------GKDCRFGVVSMCIGTGMGAAAVFERG 435 (452)
T ss_pred ------CCCCCeeEEEEccccCceeEEEEEec
Confidence 00025677777888899999999875
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-25 Score=215.82 Aligned_cols=273 Identities=19% Similarity=0.227 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+|+|+++++|| .+++|+....... + ........+...++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID-------~vi~g~~~~~~~~--------------------~--~~~~~~~~l~a~~~ 83 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID-------DIITGCALQVGEN--------------------W--LYGGRHPIFLARLP 83 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------eeEEEeecCCCcc--------------------c--ccHHHHHHHHcCCC
Confidence 56889999999999999999888 8999876421100 0 00011112333344
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh------------h--------h-------HHHHH
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI------------G--------L-------GGFVA 225 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~------------~--------~-------~~~~~ 225 (433)
.+-|+++|+++|+|++.|+..|+++|++|.+|++||+|+|.+.... . + .++..
T Consensus 84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 163 (394)
T PRK06445 84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTA 163 (394)
T ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHH
Confidence 4458999999999999999999999999999999999999543110 0 0 00000
Q ss_pred hhhhhcCC-------------------------------------------CCCCCCCc------------c-cc-----
Q 013946 226 CRALSQRN-------------------------------------------NDPTKASR------------P-WD----- 244 (433)
Q Consensus 226 ~~~ls~~~-------------------------------------------~~~~~~~~------------p-fd----- 244 (433)
...+.+++ .+|+...| | |+
T Consensus 164 ~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~l 243 (394)
T PRK06445 164 EKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVI 243 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcE
Confidence 00111000 02332222 1 11
Q ss_pred CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 013946 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 245 ~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h 324 (433)
...+...++|||+++||++++.|++++.+++++|+|++...+. +.+.+.+...++++||+++|++++|||++|+|
T Consensus 244 t~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~ 318 (394)
T PRK06445 244 TAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEIN 318 (394)
T ss_pred ecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 1124566799999999999999999998999999999987532 23334467889999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 325 ATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
...+. .|+..++.+.-..++++++...-.+||+.||+|+.+++.++.+|+.
T Consensus 319 d~f~~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------------- 369 (394)
T PRK06445 319 EAFAV----VVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------------- 369 (394)
T ss_pred ccchH----HHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------------
Confidence 98775 6666666553233467788888888999999999999999999971
Q ss_pred ccccCccEEEEecccccceeeeeEEcc
Q 013946 405 KERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 405 ~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.|+++++..+-||+..++||+.
T Consensus 370 ---~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ---KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ---cCCCEEEEEEcccCChhhEEEEEc
Confidence 124678999999999999999986
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-25 Score=213.92 Aligned_cols=270 Identities=19% Similarity=0.231 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|++++|+++|++|++|| .||+|+..... ......+...+...|
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID-------~vi~G~~~~~~------------------------~~~~~~~r~a~~~~G 77 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVD-------DVVLGCVTPVG------------------------DQGADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------cccccHHHHHHHHcC
Confidence 56888999999999999999888 88999864210 111234555667778
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh----------hHH----HHHhh--------
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG----------LGG----FVACR-------- 227 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~----------~~~----~~~~~-------- 227 (433)
+. -|+++|+.+|+|++.||..|+++|++|++|++||+|+|.+.. |+. +.. +..++
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 83 489999999999999999999999999999999999997643 210 000 00000
Q ss_pred -------------------hhh----------------cCC---CCCCCCCc------------c-ccCC----------
Q 013946 228 -------------------ALS----------------QRN---NDPTKASR------------P-WDIN---------- 246 (433)
Q Consensus 228 -------------------~ls----------------~~~---~~~~~~~~------------p-fd~~---------- 246 (433)
... +.+ .+++...| | |+..
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 000 000 12333222 2 4331
Q ss_pred ----------------CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHH
Q 013946 247 ----------------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH 310 (433)
Q Consensus 247 ----------------~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~ 310 (433)
.+...++|||+++||++++.|+++|.+++++|+|++...+.... ...+...+++++|++
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~ 312 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTI-----MLTGPVPATRKALAK 312 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHH
Confidence 13446899999999999999999999899999999887543211 122346799999999
Q ss_pred cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCC
Q 013946 311 SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389 (433)
Q Consensus 311 agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 389 (433)
+|++++|||++|+|...+. .+... .+.|+- ..++++++.+..+||++||+|+..++.++++|+++
T Consensus 313 AGl~~~DID~~ei~daFa~----~~l~~-~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~--------- 378 (402)
T PRK08242 313 AGLTVDDIDLFELNEAFAS----VVLRF-MQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR--------- 378 (402)
T ss_pred cCCCHHHCCEEEecchhhH----HHHHH-HHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc---------
Confidence 9999999999998865553 23332 344442 24688999999999999999999999999999750
Q ss_pred CCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 390 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++++...-||.-.++||++
T Consensus 379 -------------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 -------------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred -------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23577888788889999999986
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=214.00 Aligned_cols=271 Identities=18% Similarity=0.216 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+++++||+++|+++++|| .||+|+...+. ......+..++..+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-------~vi~G~~~~~~------------------------~~~~~~a~~i~~~l 75 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-------DVIMGCANPEG------------------------ATGANIARQIALRA 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------cEEEEEeeccc------------------------ccccHHHHHHHHHc
Confidence 467899999999999999999888 78999764211 00123677888888
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------h-H-HH-----
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------L-G-GF----- 223 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------~-~-~~----- 223 (433)
|+. .|+++|+++|+||+.||..|+++|++|++|++||+|+|.+..... + . +.
T Consensus 76 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~ 155 (392)
T PRK07108 76 GLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENV 155 (392)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHH
Confidence 985 699999999999999999999999999999999999997643100 0 0 00
Q ss_pred -----------HHhhhhh-------cC-C---------------CCCCCC--------------------------Cc-c
Q 013946 224 -----------VACRALS-------QR-N---------------NDPTKA--------------------------SR-P 242 (433)
Q Consensus 224 -----------~~~~~ls-------~~-~---------------~~~~~~--------------------------~~-p 242 (433)
+..+..+ .. + .+|... .+ +
T Consensus 156 a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~ 235 (392)
T PRK07108 156 AKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSA 235 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCC
Confidence 0000000 00 0 012110 11 1
Q ss_pred cc----CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 013946 243 WD----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 243 fd----~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dI 318 (433)
|. ...+...++|||+++||++++.|++++.+++++|+|++...+ .|.+.+.+...+++++|+++|++++||
T Consensus 236 ~~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Di 310 (392)
T PRK07108 236 LPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDI 310 (392)
T ss_pred CCCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHc
Confidence 21 113445679999999999999999999999999999988753 234444566899999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
|++|.|...+. .|+..++. ++- ..++++++.+..+||+.||+|+.-++.++..|++
T Consensus 311 d~~ei~eafa~----~~l~~~e~-lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~------------------ 367 (392)
T PRK07108 311 DLWELNEAFAV----QVLYCRDT-LGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR------------------ 367 (392)
T ss_pred CchHhhhHHHH----HHHHHHHh-cCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh------------------
Confidence 99998844432 22222222 231 2468899999999999999999999999999975
Q ss_pred ccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 398 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
. ..++++++..+-||.-.++||++
T Consensus 368 ---~-------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 368 ---R-------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred ---h-------CCCEEEEEEccccChhhEEEEEe
Confidence 0 23578888888889999999986
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-25 Score=213.97 Aligned_cols=271 Identities=20% Similarity=0.224 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHH-hCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~-dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+.++.+++|+ ++|+++++|| .|++|+.... .......+..++..+
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 74 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-------DVIYGCANQA------------------------GEDNRNVARMAALLA 74 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 5688899999999 6899999888 8999975310 011123466788999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh--------h---------------------
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------L--------------------- 220 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~--------~--------------------- 220 (433)
|+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... +
T Consensus 75 Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T TIGR02430 75 GLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMK 154 (400)
T ss_pred CCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccc
Confidence 996 399999999999999999999999999999999999998643210 0
Q ss_pred HHHH-------------Hhhh-------hh---------------------------cCC----CCCCCCCc--------
Q 013946 221 GGFV-------------ACRA-------LS---------------------------QRN----NDPTKASR-------- 241 (433)
Q Consensus 221 ~~~~-------------~~~~-------ls---------------------------~~~----~~~~~~~~-------- 241 (433)
..|. +.+. +. ..+ .+|+...|
T Consensus 155 ~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l 234 (400)
T TIGR02430 155 ALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGL 234 (400)
T ss_pred cccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHH
Confidence 0000 0000 00 001 12332222
Q ss_pred -----cccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHc
Q 013946 242 -----PWDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 311 (433)
Q Consensus 242 -----pfd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~a 311 (433)
.|+. ..+...++|||+++||++++.|++++.+++++|+|++..... +.+.+.+...+++++|+++
T Consensus 235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~A 309 (400)
T TIGR02430 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE-----PRIMGIGPVPATQKLLARA 309 (400)
T ss_pred hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccchHHHHHHHHHHHh
Confidence 1221 234556799999999999999999998889999999876532 2234456789999999999
Q ss_pred CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCC
Q 013946 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINL 388 (433)
Q Consensus 312 gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~ 388 (433)
|++++|||++|.|+..+ .+..+..+.|+-. ...|++..++. +||+.||+|+.++++++.+|+.
T Consensus 310 gl~~~DID~~ei~D~f~-----~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~--------- 375 (400)
T TIGR02430 310 GLSIDQFDVIELNEAFA-----AQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLER--------- 375 (400)
T ss_pred CCCHHHCCCcccCcHHH-----HHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh---------
Confidence 99999999999764433 2344445667642 23678888885 7999999999999999999975
Q ss_pred CCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 389 ENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
...++++++...-||.-.++||+++
T Consensus 376 -------------------~~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 376 -------------------SGGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred -------------------cCCCEEEEEEccccChhhEEEEEeC
Confidence 0135677777778888899999864
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=214.02 Aligned_cols=272 Identities=19% Similarity=0.289 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| .|++|+..... .....+..++..+|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~~G 74 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID-------DVIFGQGYPNG-------------------------EAPAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHcC
Confidence 56889999999999999999888 89999764211 11234557888899
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh----------------hhHH------------
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI----------------GLGG------------ 222 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~----------------~~~~------------ 222 (433)
+. + |.++|+.+|+|++.||..|+++|++|++|++||+|+|.+.... .+..
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 86 3 8999999999999999999999999999999999998643110 0000
Q ss_pred HH---Hhh-----hhhcC-----------------------------------------C---CCCCCCCc---------
Q 013946 223 FV---ACR-----ALSQR-----------------------------------------N---NDPTKASR--------- 241 (433)
Q Consensus 223 ~~---~~~-----~ls~~-----------------------------------------~---~~~~~~~~--------- 241 (433)
+. .++ .+.++ + .+|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 00 000 00000 0 01222221
Q ss_pred ---c-c---c-----CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHH
Q 013946 242 ---P-W---D-----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 309 (433)
Q Consensus 242 ---p-f---d-----~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~ 309 (433)
| | + ...+...++|||+++||++++.|++.+.+++++|.|++...+... ..+.+...++++||+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~ 309 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS-----RMGIGPVPATEKALA 309 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----cccccHHHHHHHHHH
Confidence 1 2 1 123455578999999999999999999899999999998754321 122356789999999
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
++||+++|||++|+|...+. .|...++.. |... .++++++.+..+||+.||+|+..+++++.+|++.
T Consensus 310 ~Agl~~~Did~~ei~d~f~~----~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------ 379 (404)
T PRK06205 310 RAGLTLDDIDLIELNEAFAA----QVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR------ 379 (404)
T ss_pred HcCCCHHHCCEeeeccHHHH----HHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc------
Confidence 99999999999999876653 333333322 1211 2578888888899999999999999999999861
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccCC
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
..++++++...-||.-.++||++++
T Consensus 380 ----------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 ----------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred ----------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 2467888888999999999999875
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=211.11 Aligned_cols=269 Identities=21% Similarity=0.237 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+..+.+++|++ +|+++++|| .||+|+.... ......++..++...
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id-------~vi~G~~~~~------------------------~~~g~~~ar~~~l~~ 75 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID-------DVIYGCANQA------------------------GEDNRNVARMSLLLA 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 45778899999994 799999888 8999975311 000134577888899
Q ss_pred CCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhhH----H----------------------
Q 013946 172 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLG----G---------------------- 222 (433)
Q Consensus 172 gl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~----~---------------------- 222 (433)
||.. |+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. |+.+. .
T Consensus 76 Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T PRK13359 76 GLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMK 155 (400)
T ss_pred CCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccc
Confidence 9964 99999999999999999999999999999999999998653 31000 0
Q ss_pred --HH--Hhhh-----hhcCCC-------------------CCC-------------------------CCCc--------
Q 013946 223 --FV--ACRA-----LSQRNN-------------------DPT-------------------------KASR-------- 241 (433)
Q Consensus 223 --~~--~~~~-----ls~~~~-------------------~~~-------------------------~~~~-------- 241 (433)
+. .++. ..+++. .++ ...|
T Consensus 156 ~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~ 235 (400)
T PRK13359 156 QLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALA 235 (400)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHh
Confidence 00 0000 000000 000 0011
Q ss_pred ----cccCC-----CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 013946 242 ----PWDIN-----RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 312 (433)
Q Consensus 242 ----pfd~~-----~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~ag 312 (433)
.|+.+ .+...++|||+++||++++.|++++.+++++|+|++... ..|.+.+.+...+++++|+++|
T Consensus 236 ~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AG 310 (400)
T PRK13359 236 KLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLG 310 (400)
T ss_pred cCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhC
Confidence 22221 233457899999999999999999999999999998863 2344555677899999999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHH--HHHHcCC-CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCC
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQAL--IHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al--~~~~~~~-~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 387 (433)
++++|||+||.| |..+...+ .+.|+-. ...+++..++. +||+.||+|+..++.++.+|+.
T Consensus 311 l~~~DID~iei~-------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~-------- 375 (400)
T PRK13359 311 MTLDQFDVIELN-------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLER-------- 375 (400)
T ss_pred CCHHHcCcCccC-------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh--------
Confidence 999999999976 44443333 3456531 24788999986 7999999999999999999975
Q ss_pred CCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
...++++++..+-||.-.++||++.
T Consensus 376 --------------------~~~~~g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 376 --------------------TGGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred --------------------cCCCeEEEEEcccCCceeEEEEEeC
Confidence 0235677777888899999999863
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=211.76 Aligned_cols=271 Identities=17% Similarity=0.259 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+.+++++||+|+ |+++++|| ++++|+.... . ......+..++..+
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID-------~vv~g~~~~~---------------------~---~~g~~~~~~~a~~l 76 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID-------DLMLGCGLPG---------------------G---EQGFNMARVVAVLL 76 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEccccc---------------------c---cccCCHHHHHHHHc
Confidence 568899999999997 99999888 8888854200 0 00112356788999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-------------------------------h
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-------------------------------G 219 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-------------------------------~ 219 (433)
|+.+ |+++|+++|+||+.|+..|+++|++|.+|++||+|+|.+.... .
T Consensus 77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
T PRK07851 77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEA 156 (406)
T ss_pred CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccc
Confidence 9976 8899999999999999999999999999999999988532100 0
Q ss_pred h-H---------HHHHhh---------------------hh----------hcCCC---C----C-------CCCC----
Q 013946 220 L-G---------GFVACR---------------------AL----------SQRNN---D----P-------TKAS---- 240 (433)
Q Consensus 220 ~-~---------~~~~~~---------------------~l----------s~~~~---~----~-------~~~~---- 240 (433)
+ . .+..++ .. .+... . | +...
T Consensus 157 ~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~ 236 (406)
T PRK07851 157 WHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGT 236 (406)
T ss_pred ccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCc
Confidence 0 0 000000 00 00000 0 0 1011
Q ss_pred --------ccc-cC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHH
Q 013946 241 --------RPW-DI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEK 306 (433)
Q Consensus 241 --------~pf-d~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 306 (433)
+|. +. ..+...++|||+++||++++.|++.+.+++++|+|++...+. +.+...+...++++
T Consensus 237 t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~ 311 (406)
T PRK07851 237 TYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQ 311 (406)
T ss_pred CHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHH
Confidence 111 11 125566799999999999999999999999999999876432 22333457789999
Q ss_pred HHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCC
Q 013946 307 ALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPN 385 (433)
Q Consensus 307 al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~ 385 (433)
||+++|++++|||++|.|...+. .|+..++. |+- ..++++++.+..+||+.|++|+.+++.++++|++.
T Consensus 312 al~~Agi~~~did~~ei~d~f~~----~~l~~le~-lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~----- 381 (406)
T PRK07851 312 ALARAGMSIDDIDLVEINEAFAA----QVLPSARE-LGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH----- 381 (406)
T ss_pred HHHHhCCCHHHCCeehhhhHHHH----HHHHHHHH-hCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-----
Confidence 99999999999999999876664 34444433 332 13678899999999999999999999999999751
Q ss_pred CCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 386 INLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.+++++...+-||.-.++||+++
T Consensus 382 -----------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -----------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -----------------------CCCeEEEEEccccChhhEEEEEec
Confidence 135788888889999999999975
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=211.32 Aligned_cols=271 Identities=17% Similarity=0.214 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+++|+++++|| .|++|+..... . ....+...+..+|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID-------~vi~G~~~~~~------------------------~-~~~~~~~~~l~ag 79 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID-------EVVMGCVLPAG------------------------Q-GQAPARQAALGAG 79 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------c-chHHHHHHHHcCC
Confidence 56889999999999999999888 89999754111 0 1112333444455
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh---------------hH---------HHHH
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG---------------LG---------GFVA 225 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~---------------~~---------~~~~ 225 (433)
+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. +.. +. .+..
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 53 478999999999999999999999999999999999997642 110 00 0000
Q ss_pred --------hhhhhcCCC-------------------CCCCCC----ccccC-----------------------------
Q 013946 226 --------CRALSQRNN-------------------DPTKAS----RPWDI----------------------------- 245 (433)
Q Consensus 226 --------~~~ls~~~~-------------------~~~~~~----~pfd~----------------------------- 245 (433)
...+.+++. ++.+.. .|++.
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~ 239 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPA 239 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCc
Confidence 000000000 011110 12210
Q ss_pred --------CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 246 --------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 246 --------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
..+...++|||+++||++++.|++++.+++++|.|++..... +.....+...+++++|+++||+++|
T Consensus 240 f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~D 314 (397)
T PRK06954 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAAE 314 (397)
T ss_pred cCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHHH
Confidence 112345699999999999999999999999999987764322 1112235578999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
||++|+|...+. .|+..++.+--...++++++.+..+||+.||+|+.+++.++++|+..
T Consensus 315 id~~ei~d~fa~----~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~----------------- 373 (397)
T PRK06954 315 VDLFEINEAFAV----VTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR----------------- 373 (397)
T ss_pred CCEEehhhHHHH----HHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc-----------------
Confidence 999999988775 56666655411234688999999999999999999999999999760
Q ss_pred ccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 398 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++.+.+...-||.-.++||++.
T Consensus 374 -----------~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 374 -----------GGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred -----------CCCeEEEEEccccchhhEEEEEeC
Confidence 124566777778888899999863
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=209.92 Aligned_cols=250 Identities=24% Similarity=0.313 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|+|+++++|| ++++|+..... .....+..++..+
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id-------~vi~g~~~~~~-------------------------~~~~~a~~va~~l 63 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID-------AVVVGNAAGGR-------------------------FQSFPGALIAEYL 63 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEecccccc-------------------------cccchHHHHHHHc
Confidence 467999999999999999998787 88888753211 0123567899999
Q ss_pred CCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh------------h--------------HHHH
Q 013946 172 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG------------L--------------GGFV 224 (433)
Q Consensus 172 gl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~------------~--------------~~~~ 224 (433)
|+. .|.++++.+|+|++.+|..|+++|++|++|++||+|+|.+..... + .++.
T Consensus 64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 143 (375)
T cd00829 64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALA 143 (375)
T ss_pred CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHH
Confidence 995 489999999999999999999999999999999999996542210 0 0000
Q ss_pred HhhhhhcCC------------------CCCCCC----------------CccccCCCCCcccccceeEEEecchHHHHhc
Q 013946 225 ACRALSQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKR 270 (433)
Q Consensus 225 ~~~~ls~~~------------------~~~~~~----------------~~pfd~~~~G~~~geGaaalvL~~~~~A~~~ 270 (433)
....+.+++ .+|... +.|+.. .+...++||++++||++++.|++.
T Consensus 144 a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~~-~~~~~~~DGaaa~vl~s~~~a~~~ 222 (375)
T cd00829 144 ARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRL-LDCCPVSDGAAAVVLASEERAREL 222 (375)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCch-hhcCCCCCceeEEEEecHHHHhhc
Confidence 000011000 012111 113222 456678999999999999999887
Q ss_pred CCeEEEEEEEeeeccCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcCC-
Q 013946 271 GAKIYAEFRGGSFTSDAYHMTEPHP--DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN- 346 (433)
Q Consensus 271 g~~i~a~i~g~~~~~d~~~~~~~~~--~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~- 346 (433)
.+++++|+|++...+..+...... ...+...+++++|+++|++++|||++|+|++++. .+...++.+ |...
T Consensus 223 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g 297 (375)
T cd00829 223 -TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKG 297 (375)
T ss_pred -CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCC
Confidence 667899999999887765543332 5667889999999999999999999999999986 444444333 1111
Q ss_pred --------------CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHc
Q 013946 347 --------------RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 347 --------------~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+|++...+. +||+.+++|+..+++++++|+.
T Consensus 298 ~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg 346 (375)
T cd00829 298 EGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRG 346 (375)
T ss_pred chHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcC
Confidence 12456555555 5999999999999999999986
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-24 Score=209.14 Aligned_cols=269 Identities=19% Similarity=0.227 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .||+|+..... . ...++..++..+|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID-------~vi~g~~~~~~------------------------~-~~~~~~~~~~~~G 74 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE-------EVIMGTVLQGG------------------------Q-GQIPSRQAARAAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC------------------------C-CCCHHHHHHHHcC
Confidence 56889999999999999999888 89999764100 0 1123445778899
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-h--------------------HH----HH-
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-L--------------------GG----FV- 224 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-~--------------------~~----~~- 224 (433)
+. -|+++|+++|+||+.||..|+++|++|++|++||+|+|.+..... . .. +.
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK08235 75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSG 154 (393)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 94 389999999999999999999999999999999999997543110 0 00 00
Q ss_pred -Hhh-----hhhcC--------------------C------------------------CCCCCCCcc------------
Q 013946 225 -ACR-----ALSQR--------------------N------------------------NDPTKASRP------------ 242 (433)
Q Consensus 225 -~~~-----~ls~~--------------------~------------------------~~~~~~~~p------------ 242 (433)
.++ .+.++ + .+|+...|+
T Consensus 155 ~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 155 VHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 000 00000 0 013322221
Q ss_pred -cc-----CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 243 -WD-----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 243 -fd-----~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|+ ...+...++|||+++||++++.|++.+.+++++|.|++........ .......++++||+++||+++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVE 309 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHH
Confidence 11 1124556799999999999999999999999999998765432111 112345899999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
|||++|+|...+. .|...+ +.|+- ..++++++.+..+||+.||+|+.+++.++.+|+..
T Consensus 310 did~~e~~d~f~~----~~l~~~-e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~--------------- 369 (393)
T PRK08235 310 DIDLFEINEAFAA----VALAST-EIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR--------------- 369 (393)
T ss_pred HCCeehhcchhHH----HHHHHH-HHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999999876653 333333 34442 24688899999999999999999999999999751
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++.+.+...-||.-.++||++
T Consensus 370 -------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 -------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred -------------CCCeEEEEEcccccceEEEEEEe
Confidence 12346666677788888899885
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-24 Score=209.81 Aligned_cols=280 Identities=19% Similarity=0.278 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+.+++++||+|||+++++|| ++++|+..+... ....+...+
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID-------~~~~g~~~~~~~----------------------------~~~~~~~~l 66 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQ-------QAYVGYVYGDST----------------------------SGQRALYEV 66 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCC-------eeEEEEEeCCcc----------------------------hhHHHHHHc
Confidence 467999999999999999998776 566665432110 011245678
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh---------hHHH-----------------
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG---------LGGF----------------- 223 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~---------~~~~----------------- 223 (433)
|+++ |.++|+++|+|++.||..|+++|++|++|++||+|+|.+.. +.. +..+
T Consensus 67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK08256 67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPAL 146 (391)
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccH
Confidence 9988 99999999999999999999999999999999999987531 100 0000
Q ss_pred -----HHhhhhhcCC------------------CCCCCCC-cccc--------------CCCCCcccccceeEEEecchH
Q 013946 224 -----VACRALSQRN------------------NDPTKAS-RPWD--------------INRDGFVMGEGAGVLLLEELE 265 (433)
Q Consensus 224 -----~~~~~ls~~~------------------~~~~~~~-~pfd--------------~~~~G~~~geGaaalvL~~~~ 265 (433)
...+.+.+++ .+|.... +|.+ ...+...++|||+++||.+++
T Consensus 147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~ 226 (391)
T PRK08256 147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEE 226 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHH
Confidence 0000011110 1221111 1111 113455679999999999999
Q ss_pred HHHhcCCeEEEEEEEeeeccCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 266 HAKKRGAKIYAEFRGGSFTSDAYHMTEP-H---P-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 266 ~A~~~g~~i~a~i~g~~~~~d~~~~~~~-~---~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
.|++.+.+++++|+|++...+....... + . .......+++++|+++|++++|||++|+|.+.+. .|...++
T Consensus 227 ~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le 302 (391)
T PRK08256 227 FARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYE 302 (391)
T ss_pred HHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHH
Confidence 9988775678899998877654322111 1 1 1224567999999999999999999999999886 5555554
Q ss_pred HH-HcCC---------------CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 341 HC-FGQN---------------RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 341 ~~-~~~~---------------~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
.+ |..+ ..+|++..-+. .||+.||+|+.+++++++||+..-
T Consensus 303 ~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a--------------------- 361 (391)
T PRK08256 303 ALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------------- 361 (391)
T ss_pred HcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc---------------------
Confidence 43 2111 13566555555 499999999999999999998621
Q ss_pred CcccccCccEEEEecccccceeeeeEEcc
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
...+-.+.+++++++.|.+..+...|+++
T Consensus 362 g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CCCcCCccceEEEeccccceeEEEEEEec
Confidence 01112245789999999655555556654
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-24 Score=206.95 Aligned_cols=284 Identities=17% Similarity=0.161 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||+++++|| +++++++. + .+... ...+..++..+|
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID-------~iv~~~~~-~---------------------~~~~~--~~~~~~va~~LG 73 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID-------AVVVGKAP-D---------------------FFEGV--MMPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccc-c---------------------ccccc--cCchHHHHHhcC
Confidence 56899999999999999999888 88887631 0 00100 112357889999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcch---------------hh-----hHHHHHhhhhhc
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP---------------IG-----LGGFVACRALSQ 231 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~---------------~~-----~~~~~~~~~ls~ 231 (433)
+++ |++.|+++|+++..++..|+++|++|++|.|||+|+|.+... .. +..+...+.+.+
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 986 888999999999999999999999999999999999864221 00 011111111111
Q ss_pred C------------------CCCCCCCC-cc-cc--------------CCCCCcccccceeEEEecchHHHHhcCCeEEEE
Q 013946 232 R------------------NNDPTKAS-RP-WD--------------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 277 (433)
Q Consensus 232 ~------------------~~~~~~~~-~p-fd--------------~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~ 277 (433)
+ ..+|.... +| ++ ...+...++|||+++||.+.+.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 1 11232211 11 22 124666789999999999999998877677789
Q ss_pred EEEeeeccCCCCCCC-CCCChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCCCCHHHHHHHHHH-HcCC-------
Q 013946 278 FRGGSFTSDAYHMTE-PHPDGVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FGQN------- 346 (433)
Q Consensus 278 i~g~~~~~d~~~~~~-~~~~~~~~~~ai~~al~~agl~--~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~------- 346 (433)
|+|++...+...... +.........++++||+++|++ ++|||++|+|++.+. .|...++.+ |..+
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~ 309 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLT 309 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHH
Confidence 999998766543221 2223456778999999999998 699999999999886 455544433 1110
Q ss_pred --------CCcccccchhhh-hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEec
Q 013946 347 --------RGLRVNSTKSMI-GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 347 --------~~~~v~s~k~~~-Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 417 (433)
..+||+...+.+ ||+.|++|+.+++++++||+..- ...+-.+.+++++++
T Consensus 310 ~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~~~l~~~ 368 (386)
T PRK08313 310 EAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGARKALGHA 368 (386)
T ss_pred HCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCccEEEEec
Confidence 235665555555 99999999999999999998721 111222467889888
Q ss_pred cc-ccceeeeeEEccC
Q 013946 418 FG-FGGHNSSIIFSPY 432 (433)
Q Consensus 418 ~g-~gG~n~~~vl~~~ 432 (433)
.| .+...+.+||+.-
T Consensus 369 ~Gg~~~~~~~~v~~~~ 384 (386)
T PRK08313 369 YGGGSQFFSMWVVGSE 384 (386)
T ss_pred cCCcceEEEEEEEecC
Confidence 86 4445555666654
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-24 Score=208.12 Aligned_cols=270 Identities=21% Similarity=0.272 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+|||+++++|| +|++|+..... . ....+..++..+|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID-------~vv~g~~~~~~------------------------~-~~~~~~~~~~~~G 73 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ-------EVFFGNVLSAN------------------------L-GQAPARQAALGAG 73 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCcCC------------------------c-CCcHHHHHHHhcC
Confidence 66889999999999999999888 88988642100 0 0112445778889
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh----------------h---h--H--------
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI----------------G---L--G-------- 221 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~----------------~---~--~-------- 221 (433)
+. -|.++|+++|+|++.||..|+++|++|++|++||+|+|.+.... . + .
T Consensus 74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (394)
T PLN02644 74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYND 153 (394)
T ss_pred CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCC
Confidence 86 27888999999999999999999999999999999988652100 0 0 0
Q ss_pred -HH--HHhhhhhcC--------------------CCCCCCC-------------Ccc-----------------------
Q 013946 222 -GF--VACRALSQR--------------------NNDPTKA-------------SRP----------------------- 242 (433)
Q Consensus 222 -~~--~~~~~ls~~--------------------~~~~~~~-------------~~p----------------------- 242 (433)
.| .....+.++ +.+|... ..|
T Consensus 154 ~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p 233 (394)
T PLN02644 154 FGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRP 233 (394)
T ss_pred CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCC
Confidence 00 000011000 0011000 000
Q ss_pred -cc------CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 013946 243 -WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 315 (433)
Q Consensus 243 -fd------~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~ 315 (433)
|. ...+...++||++++||++++.|++++.+++++|+|++...+.... .......+++++|+++|+++
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~ 308 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-----FTTAPALAIPKALKHAGLEA 308 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-----cchhHHHHHHHHHHHcCCCH
Confidence 10 0124667799999999999999999999999999999987653211 11233469999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||++|+|+..+. ......+.|+- ..++++++.+..+||+.||+|+.++++++.+|+..
T Consensus 309 ~Did~~Ei~d~f~~-----~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~-------------- 369 (394)
T PLN02644 309 SQVDYYEINEAFSV-----VALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK-------------- 369 (394)
T ss_pred HHCCEEEeCcHHHH-----HHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc--------------
Confidence 99999999866542 22333345553 24678888888999999999999999999999761
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++.+..+-||...++||++.
T Consensus 370 --------------~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 370 --------------NGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred --------------CCCeEEEEEeccCCceeEEEEEec
Confidence 124677777778899999999874
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-24 Score=206.87 Aligned_cols=272 Identities=18% Similarity=0.216 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+..++++||++ +|+++++|| .+++|+.... .......+..++...
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id-------~vi~g~~~~~------------------------~~~g~~~ar~~~~~~ 76 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID-------DIIWGCVQQT------------------------LEQGFNIARNAALLA 76 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC-------eEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 56788899999995 899999888 8999865310 000122345677888
Q ss_pred CCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------hHHHHHhhhhh
Q 013946 172 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGGFVACRALS 230 (433)
Q Consensus 172 gl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------~~~~~~~~~ls 230 (433)
|+.. |.++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... ..++.....+.
T Consensus 77 Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 156 (387)
T PRK08947 77 GIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGK 156 (387)
T ss_pred CCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHH
Confidence 8863 77999999999999999999999999999999999997643110 00000000000
Q ss_pred cC--------------------C------------------------CCCCCCCc------------c-ccC------CC
Q 013946 231 QR--------------------N------------------------NDPTKASR------------P-WDI------NR 247 (433)
Q Consensus 231 ~~--------------------~------------------------~~~~~~~~------------p-fd~------~~ 247 (433)
++ + .+|+...| | |+. ..
T Consensus 157 ~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 236 (387)
T PRK08947 157 MHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAG 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEcc
Confidence 00 0 01222221 1 222 24
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCC
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 327 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~g 327 (433)
+...++|||+++||++++.|++.+.+++++|+|++.+....+. .......+++++|+++|++|+|||++|+|...
T Consensus 237 ~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~DId~~El~d~F 311 (387)
T PRK08947 237 TSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSI-----MGYGPVPATQKALKRAGLSISDIDVFELNEAF 311 (387)
T ss_pred ccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccc-----ccccHHHHHHHHHHHcCCCHHHCCEEEecccc
Confidence 5667899999999999999999998899999999987432211 12234688999999999999999999999988
Q ss_pred CCCCCHHHHHHHHHH-HcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 328 TPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 328 t~~~D~~E~~al~~~-~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
+. .|+..++.+ |.+. .+++++...-.+||+.||+|+.+++.++.+|+.
T Consensus 312 ~~----~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~------------------------- 362 (387)
T PRK08947 312 AA----QSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER------------------------- 362 (387)
T ss_pred hH----HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-------------------------
Confidence 85 566655544 2222 356677777778999999999999999999975
Q ss_pred ccccCccEEEEecccccceeeeeEEccC
Q 013946 405 KERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 405 ~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+.++++.++.+-+|..+.+||+++
T Consensus 363 ---~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 363 ---KDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred ---cCCCEEEEEEeecccceeEEEEEeC
Confidence 1246788888887788888888764
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=204.80 Aligned_cols=272 Identities=18% Similarity=0.191 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+.++.++||++ +|++|++|| .|++|+..... .....++..++...
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id-------~v~~G~~~~~~------------------------~~g~~~ar~~~~~~ 74 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE-------DIYWGCVQQTL------------------------EQGFNIARNAALLA 74 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC-------EEEEecccccc------------------------cccchHHHHHHHHC
Confidence 67889999999995 699999888 89999753100 00112455555566
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------hHHHHHhhhhh
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGGFVACRALS 230 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------~~~~~~~~~ls 230 (433)
|+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... ..++.....+.
T Consensus 75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 154 (385)
T TIGR02445 75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGK 154 (385)
T ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHH
Confidence 764 377999999999999999999999999999999999997542110 00000000000
Q ss_pred cC----------------------------C----------------CCCCCCCcc-------------ccC------CC
Q 013946 231 QR----------------------------N----------------NDPTKASRP-------------WDI------NR 247 (433)
Q Consensus 231 ~~----------------------------~----------------~~~~~~~~p-------------fd~------~~ 247 (433)
++ + .+|+...|+ |+. ..
T Consensus 155 ~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 234 (385)
T TIGR02445 155 MHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAG 234 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecc
Confidence 00 0 013333321 222 14
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCC
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 327 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~g 327 (433)
+...++||++++||++++.|++++.+++++|+|++.+.... ...+.+...+++++|+++||+|+|||++|+|...
T Consensus 235 ~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daF 309 (385)
T TIGR02445 235 TSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDP-----SIMGYGPVPATQKALKRAGLSISDIDVFELNEAF 309 (385)
T ss_pred cCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCHHHcCEEEEcccc
Confidence 56668999999999999999999989999999999864321 1122245789999999999999999999999988
Q ss_pred CCCCCHHHHHHHHHH-HcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 328 TPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 328 t~~~D~~E~~al~~~-~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
+. .|+..++.+ |... .+++++...-.+||+.||+|+..++.++..|++
T Consensus 310 a~----~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------------- 360 (385)
T TIGR02445 310 AA----QALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------------- 360 (385)
T ss_pred HH----HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-------------------------
Confidence 75 555555544 2122 355666666667999999999888888855543
Q ss_pred ccccCccEEEEecccccceeeeeEEccC
Q 013946 405 KERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 405 ~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+.+++++++.+-+|.-.++||+++
T Consensus 361 ---~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ---KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ---cCCCeEEEEEecccChhheEEEEeC
Confidence 1245788888888999999999874
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-24 Score=208.28 Aligned_cols=283 Identities=23% Similarity=0.279 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||+++++|| .+++++.... ....+..+..++..+|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId-------~vi~~~~~~~------------------------~~~~~~~a~~va~~lG 72 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ-------LVVGADTIRN------------------------GYPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------ccCCccHHHHHHHHhC
Confidence 67899999999999999998887 7777754210 0011223567999999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc----h----------------hhh-----HHHHHh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI----P----------------IGL-----GGFVAC 226 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~----~----------------~~~-----~~~~~~ 226 (433)
+++ |.++++++|+|++.||..|+++|++|++|.+||+|+|.+.. + ..+ .++...
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 988 89999999999999999999999999999999999996432 0 000 000000
Q ss_pred hhhhcC------------------CCCCCCCCc-ccc--------------CCCCCcccccceeEEEecchHHHHhc--C
Q 013946 227 RALSQR------------------NNDPTKASR-PWD--------------INRDGFVMGEGAGVLLLEELEHAKKR--G 271 (433)
Q Consensus 227 ~~ls~~------------------~~~~~~~~~-pfd--------------~~~~G~~~geGaaalvL~~~~~A~~~--g 271 (433)
..+.++ ..+|+...| |.+ ...+...++|||+++||.+++.|++. +
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~ 232 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGS 232 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccc
Confidence 011111 112322111 111 11356667999999999999999887 5
Q ss_pred CeEEEEEEEeeeccCCCCC---C-----------CCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 272 AKIYAEFRGGSFTSDAYHM---T-----------EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 272 ~~i~a~i~g~~~~~d~~~~---~-----------~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
.+..++|++++...+.... . .+.+.......+++++|+++|++++|||++|+|.+.+. .|+.
T Consensus 233 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~ 308 (399)
T PRK06059 233 VAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELD 308 (399)
T ss_pred cCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHH
Confidence 5566889998876432210 0 01111122357899999999999999999999999876 4554
Q ss_pred HHHHH-HcC---------------CCCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCcc
Q 013946 338 ALIHC-FGQ---------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 399 (433)
Q Consensus 338 al~~~-~~~---------------~~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 399 (433)
.++.+ |.. ...+||+..-+. .||+.|++|+.++++++++|+...
T Consensus 309 ~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a------------------ 370 (399)
T PRK06059 309 WYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA------------------ 370 (399)
T ss_pred HHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc------------------
Confidence 44332 110 012455555444 599999999999999999998621
Q ss_pred ccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 400 LVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 400 ~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
...|-.+.+++++.+.|.+|..+++||++
T Consensus 371 ---g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 ---GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ---CCccCCCccEEEEeccCCcccceEEEecC
Confidence 11122246788888888888999999875
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-24 Score=206.78 Aligned_cols=271 Identities=20% Similarity=0.225 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHH-hCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~-dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+.++.+++|+ ++|+++++|| .|++|+.... .......+..++...
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 75 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD-------DVIYGCANQA------------------------GEDNRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHHc
Confidence 5688899999999 6899999888 7999975310 111123466688999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh--------h---------------------
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------L--------------------- 220 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~--------~--------------------- 220 (433)
|+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... +
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 993 499999999999999999999999999999999999998643210 0
Q ss_pred HHHH--Hhhhh-----hcC-----------------------C---------------------CCCCCCCc--------
Q 013946 221 GGFV--ACRAL-----SQR-----------------------N---------------------NDPTKASR-------- 241 (433)
Q Consensus 221 ~~~~--~~~~l-----s~~-----------------------~---------------------~~~~~~~~-------- 241 (433)
..|. .++.. .++ + .+++...|
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0000 00000 000 1 01222222
Q ss_pred ----c-ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHc
Q 013946 242 ----P-WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 311 (433)
Q Consensus 242 ----p-fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~a 311 (433)
| |+. ..+...++|||+++||++++.|++++.+++++|+|++...... ...+.+...+++++|+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~A 310 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP-----RIMGIGPAPATRKLLARL 310 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----ccccchHHHHHHHHHHHc
Confidence 2 321 1344567999999999999999999988999999998875422 223345678999999999
Q ss_pred CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCC
Q 013946 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINL 388 (433)
Q Consensus 312 gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~ 388 (433)
||+++|||++|.|...+. .|.. ..+.|+-. ...|++..++. +||+.||+|+..+++++.+|+.
T Consensus 311 gl~~~DId~~ei~D~f~~----~~l~-~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~--------- 376 (401)
T PRK09050 311 GLTIDQFDVIELNEAFAA----QGLA-VLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER--------- 376 (401)
T ss_pred CCCHHHCCccccCcHhHH----HHHH-HHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHh---------
Confidence 999999999997754432 2222 23445532 23688888886 7999999999999999999975
Q ss_pred CCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 389 ENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
...++++++...-||.-.++|++++
T Consensus 377 -------------------~~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 377 -------------------TGGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred -------------------cCCCeEEEEEcccccceeEEEEEeC
Confidence 0235678888888899999999863
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-24 Score=208.23 Aligned_cols=271 Identities=20% Similarity=0.278 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.++.++||+++|+++++|| .+++|+...+. ......+..++...|
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-------~v~~G~~~~~~------------------------~~~~~~ar~~~~~~G 75 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-------DVILGCTNQAG------------------------EDSRNVARNALLLAG 75 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc------------------------cccccHHHHHHHhcC
Confidence 56889999999999999999888 89999753111 001123445778888
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh---------------hHH-------------
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------------LGG------------- 222 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~---------------~~~------------- 222 (433)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... +..
T Consensus 76 lp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK08131 76 LPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVA 155 (401)
T ss_pred CCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCccccc
Confidence 86 489999999999999999999999999999999999997642110 000
Q ss_pred -HH-------HhhhhhcCCC---------------------CC--CCCCccccC--------------------------
Q 013946 223 -FV-------ACRALSQRNN---------------------DP--TKASRPWDI-------------------------- 245 (433)
Q Consensus 223 -~~-------~~~~ls~~~~---------------------~~--~~~~~pfd~-------------------------- 245 (433)
|. ....+.+++. ++ .....|.+.
T Consensus 156 ~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L 235 (401)
T PRK08131 156 QYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEAL 235 (401)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHH
Confidence 00 0000000000 00 000001110
Q ss_pred -------------CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 013946 246 -------------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 312 (433)
Q Consensus 246 -------------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~ag 312 (433)
..+...++|||+++||++++.|++.+.+++++|+|++...+. +...+.+...+++++|+++|
T Consensus 236 ~~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~a~~~ag 310 (401)
T PRK08131 236 TKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE-----PRIMGIGPVEAIKKALARAG 310 (401)
T ss_pred hcCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccC-----CccccchHHHHHHHHHHHcC
Confidence 015566899999999999999999998899999999987542 22223466789999999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchh--hhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCC
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~--~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 389 (433)
|+++|||++|+|...+. .|+..++ .++-. ..++++..++ .+||+.||+|+.++++++++|+..
T Consensus 311 l~~~did~~ei~d~Fa~----~~l~~~e-~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~--------- 376 (401)
T PRK08131 311 LTLDDMDIIEINEAFAS----QVLGCLK-GLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRR--------- 376 (401)
T ss_pred CCHHHCCeehhccHHHH----HHHHHHH-HcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhc---------
Confidence 99999999999987775 3444333 33321 1356666666 469999999999999999999861
Q ss_pred CCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 390 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. .+++++....-||+..++||++.
T Consensus 377 ------------~-------~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 377 ------------G-------KRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred ------------C-------CCceEEEEEecCChhhEEEEEec
Confidence 0 12334444455677788888864
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=205.01 Aligned_cols=271 Identities=17% Similarity=0.172 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.++++++|+++|++|++|| .|++|+.... .......+..++...|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-------~v~~G~~~~~------------------------~~q~~~~ar~~~l~~G 75 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-------QVIGGCVTQA------------------------GEQSNNITRTAWLHAG 75 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHhCC
Confidence 56889999999999999999888 7899875310 0001223456667788
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-hh---------------H----HHH-Hhhhh
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-GL---------------G----GFV-ACRAL 229 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~~---------------~----~~~-~~~~l 229 (433)
+. + |+++|+++|+||+.|+..|++.|++|++|++||+|+|.+.... .. . .+. ....+
T Consensus 76 l~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~ 155 (387)
T PRK07850 76 LPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIA 155 (387)
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHH
Confidence 86 3 8999999999999999999999999999999999999864311 00 0 000 00000
Q ss_pred hcCCC-----------------------------------------CCCCC---------------------Ccccc---
Q 013946 230 SQRNN-----------------------------------------DPTKA---------------------SRPWD--- 244 (433)
Q Consensus 230 s~~~~-----------------------------------------~~~~~---------------------~~pfd--- 244 (433)
.+++. +|... ...|.
T Consensus 156 ~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~ 235 (387)
T PRK07850 156 KRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGI 235 (387)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCC
Confidence 00000 11111 11221
Q ss_pred -CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 245 -INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 245 -~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
...+...++|||+++||.+++.|++.+.++.++|+|++..... +.....+...+++++|+++|++++|||++|+
T Consensus 236 ~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei 310 (387)
T PRK07850 236 HTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVEI 310 (387)
T ss_pred ccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeeee
Confidence 1125566789999999999999999888888999999865321 1112345578999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 324 HATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 324 h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
|...+. .|+..++ .++- ..+++++...-.+||+.+|+|+..+++++.+|+.+
T Consensus 311 ~d~F~~----~~l~~~e-~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~---------------------- 363 (387)
T PRK07850 311 NEAFAS----VVLSWAQ-VHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT---------------------- 363 (387)
T ss_pred cccchH----HHHHHHH-HcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc----------------------
Confidence 998875 4554443 3442 23566777777789999999999999999999751
Q ss_pred CcccccCccEEEEecccccceeeeeEEccC
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++++..+-||...++||+++
T Consensus 364 ------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 ------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred ------CCCeEEEEEccccCceeEEEEEeC
Confidence 235677877888899999999864
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=203.04 Aligned_cols=275 Identities=21% Similarity=0.224 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||+++++|| ++++++... . .....++..+|
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID-------~iv~~~~~~--------------------------~---~~~~~la~~lG 72 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD-------GLFTASPDD--------------------------A---LWGLSVAEYLG 72 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCCC--------------------------C---CcHHHHHHHcC
Confidence 56899999999999999999888 888876320 0 01235888899
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEe-cccCCcc---------------h------hhhHHHHHhhhh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCG-GSDAAVI---------------P------IGLGGFVACRAL 229 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvg-g~d~~~~---------------~------~~~~~~~~~~~l 229 (433)
+++ +.+.++++|+|+..+|..|+++|++|.+|++||+ |.+.... | ..+..+.....+
T Consensus 73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym 152 (384)
T PRK06158 73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHM 152 (384)
T ss_pred CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHH
Confidence 976 7778899999999999999999999999999986 5553210 0 001111111111
Q ss_pred hcCC------------------CCCCCC----------------CccccCCCCCcccccceeEEEecchHHHHhcCCeEE
Q 013946 230 SQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIY 275 (433)
Q Consensus 230 s~~~------------------~~~~~~----------------~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~ 275 (433)
.+++ .+|... +.|+.. .+++.++||++++||++++.|++.+.++
T Consensus 153 ~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~- 230 (384)
T PRK06158 153 HQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP- 230 (384)
T ss_pred HHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCc-
Confidence 1111 123211 123332 4677899999999999999998866543
Q ss_pred EEEEEeeeccCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcC--------
Q 013946 276 AEFRGGSFTSDAYHMT-EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQ-------- 345 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~-~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~-------- 345 (433)
+.|+|++...+..... .+.........++++||++|||+|+|||++|+|++.+. .|...++.+ |..
T Consensus 231 v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~ 306 (384)
T PRK06158 231 VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFV 306 (384)
T ss_pred EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHH
Confidence 6788888776644332 22333445678999999999999999999999999986 455444332 111
Q ss_pred -------CCCcccccchhhh--hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 346 -------NRGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 346 -------~~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
...+|++...+.+ ||+ |++|+.+++++++||+..- ...|-.+.++++++
T Consensus 307 ~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g~rQv~~a~~gl~~ 364 (384)
T PRK06158 307 EGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------GERQVAGAEVALAH 364 (384)
T ss_pred HCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------CCCcCCCCCEEEEE
Confidence 0235666655554 999 9999999999999998621 11112245788988
Q ss_pred ccc-ccceeeeeEEcc
Q 013946 417 SFG-FGGHNSSIIFSP 431 (433)
Q Consensus 417 s~g-~gG~n~~~vl~~ 431 (433)
+.| ++..++.+|+++
T Consensus 365 ~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 365 GNGGVLSSQATAILGT 380 (384)
T ss_pred CCCCcccceEEEEEec
Confidence 876 444555567664
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-23 Score=203.61 Aligned_cols=283 Identities=17% Similarity=0.196 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHhCCCCccc--ccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH--
Q 013946 93 MLYLLTAGKKALADGGITEDV--MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA-- 168 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~--~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-- 168 (433)
..|+.+++++||+|+|+++++ || ++|+|+..+.. +.. ...++..++
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID-------~vi~G~~~~~~---------------------~~~--~~~~a~~~~~~ 98 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD-------KVVVGNFLGEL---------------------FSS--QGHLGPAAVGS 98 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC-------EEEEEeccccc---------------------ccc--ccchHHHHHHh
Confidence 568899999999999999988 88 88988753211 000 011122333
Q ss_pred -----HHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-h-----------h----------
Q 013946 169 -----MDLGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G-----------L---------- 220 (433)
Q Consensus 169 -----~~lgl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~-----------~---------- 220 (433)
.++|+.+ |+++|+++|+||+.||..|+++|++|++|++||+|+|.+.... . +
T Consensus 99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
T PTZ00455 99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFT 178 (438)
T ss_pred ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcc
Confidence 4556655 9999999999999999999999999999999999999653210 0 0
Q ss_pred -HH-HH-HhhhhhcCC-------------------CCCCCCC--cccc------------------------CCCCCccc
Q 013946 221 -GG-FV-ACRALSQRN-------------------NDPTKAS--RPWD------------------------INRDGFVM 252 (433)
Q Consensus 221 -~~-~~-~~~~ls~~~-------------------~~~~~~~--~pfd------------------------~~~~G~~~ 252 (433)
.. |. .+..+.+++ .+|.... +|.+ ...+...+
T Consensus 179 ~~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~ 258 (438)
T PTZ00455 179 FPCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQV 258 (438)
T ss_pred hHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCc
Confidence 00 10 012222221 1232210 1111 12344557
Q ss_pred ccceeEEEecchHHHHhcCCeE----EEEEEEeeeccCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 253 GEGAGVLLLEELEHAKKRGAKI----YAEFRGGSFTSDAYHMTEP--HPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 253 geGaaalvL~~~~~A~~~g~~i----~a~i~g~~~~~d~~~~~~~--~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
+|||+++||.+++.|++.+.++ .++|+|++...+......+ ...+. ...+++++|+++|++++|||++|+|..
T Consensus 259 sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~da 337 (438)
T PTZ00455 259 SDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVHDC 337 (438)
T ss_pred cccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchH-HHHHHHHHHHHcCCCHHHCcEeeeccc
Confidence 8999999999999999887665 6899999887653221111 11122 368999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHH-HcCC-----------------CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCC
Q 013946 327 STPAGDIKEYQALIHC-FGQN-----------------RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINL 388 (433)
Q Consensus 327 gt~~~D~~E~~al~~~-~~~~-----------------~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~ 388 (433)
.+. .|+..++.+ |..+ .+++++..--.+||+.||+|+.++++++++|+..-
T Consensus 338 Fa~----~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~a------- 406 (438)
T PTZ00455 338 FTI----AELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQC------- 406 (438)
T ss_pred ChH----HHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhcc-------
Confidence 885 555555433 1111 13334444444599999999999999999998611
Q ss_pred CCCCCCCCCccccCCcccccC-ccEEEEeccc-ccceeeeeEEcc
Q 013946 389 ENPDAVVDTNVLVGPKKERLE-VKAALSNSFG-FGGHNSSIIFSP 431 (433)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~g-~gG~n~~~vl~~ 431 (433)
...|-.+ .+.+++++.| ++..++..||+.
T Consensus 407 --------------g~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 407 --------------GEYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred --------------ccCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 0011112 4678888876 666666677753
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-23 Score=202.94 Aligned_cols=282 Identities=17% Similarity=0.154 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+|+|+++++|| ++++|+....+. .......++..+|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID-------~v~vg~~~~~~~-------------------------~~~~~~~~a~~lG 75 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID-------AAWFGTHYDEIG-------------------------SGKSGTPLSRALR 75 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc-------------------------ccchhHHHHHHcC
Confidence 56889999999999999999888 899986431000 0011234777899
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh----------------------hhHHHHHhhh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI----------------------GLGGFVACRA 228 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~----------------------~~~~~~~~~~ 228 (433)
+.+ |.++|+.+|+|++.||..|+.+|++|++|++||+|+|.+.. +. ....+...+.
T Consensus 76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~ 155 (398)
T PRK06157 76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAY 155 (398)
T ss_pred CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHH
Confidence 976 78899999999999999999999999999999999996422 00 0000000011
Q ss_pred hhcCC----------------------CCCCCCC------------ccc-c--CCCCCcccccceeEEEecchHHHHhcC
Q 013946 229 LSQRN----------------------NDPTKAS------------RPW-D--INRDGFVMGEGAGVLLLEELEHAKKRG 271 (433)
Q Consensus 229 ls~~~----------------------~~~~~~~------------~pf-d--~~~~G~~~geGaaalvL~~~~~A~~~g 271 (433)
+.+++ .+|+... +|. + ..-+...++|||+++||.+++.|++.+
T Consensus 156 ~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~ 235 (398)
T PRK06157 156 AAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALG 235 (398)
T ss_pred HHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhC
Confidence 11110 1222111 111 1 112566689999999999999998877
Q ss_pred CeEEEEEEEeeeccCCCCC---CCCCCC-hHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCCCCHHHHHHHHHH-Hc
Q 013946 272 AKIYAEFRGGSFTSDAYHM---TEPHPD-GVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FG 344 (433)
Q Consensus 272 ~~i~a~i~g~~~~~d~~~~---~~~~~~-~~~~~~ai~~al~~agl~--~~dId~v~~h~~gt~~~D~~E~~al~~~-~~ 344 (433)
....++|+|++...+.... ...++. ......+.+++|+++||+ ++|||++|+|.+.+. .|+..++.+ |.
T Consensus 236 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl~ 311 (398)
T PRK06157 236 KKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGLS 311 (398)
T ss_pred CCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCCC
Confidence 6456899999876543211 111221 223457899999999998 799999999999886 455555433 11
Q ss_pred C---------------CCCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccc
Q 013946 345 Q---------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 407 (433)
Q Consensus 345 ~---------------~~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 407 (433)
. ...+|++..-+. +||+.+|+|+.++++++++|+... ...|-
T Consensus 312 ~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv 370 (398)
T PRK06157 312 ERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA---------------------GERQL 370 (398)
T ss_pred CCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc---------------------cCccC
Confidence 1 123566555554 599999999999999999998721 11122
Q ss_pred cCccEEEEecccc---cceeeeeEEcc
Q 013946 408 LEVKAALSNSFGF---GGHNSSIIFSP 431 (433)
Q Consensus 408 ~~~~~~l~~s~g~---gG~n~~~vl~~ 431 (433)
.+.+++++++.|- |..++..|+++
T Consensus 371 ~~a~~~l~~~~gg~~~~~~~~~~~~~~ 397 (398)
T PRK06157 371 KNPRLALTHNLGGAPGQNVCSVSIVGR 397 (398)
T ss_pred CCccEEEEeccCCcCCCCEEEEEEEec
Confidence 3467889888773 33344445543
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-23 Score=199.77 Aligned_cols=281 Identities=16% Similarity=0.182 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| ++++++..... .. ....+..++..+|
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID-------~~i~~~~~~~~----------------------~~--~~~~a~~l~~~lG 78 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID-------CVVIGSAPDAF----------------------DG--VHMKGEYLSHGSG 78 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCcc----------------------cc--cccHHHHHHHHcC
Confidence 56899999999999999999888 88887531100 00 1234556888999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcch-------------------hhh-----HHHHHhh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP-------------------IGL-----GGFVACR 227 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-------------------~~~-----~~~~~~~ 227 (433)
+.+ |.+.|+++|+|+..+|..|+.+|++|++|++||+++|.+... ... .++...+
T Consensus 79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~r 158 (392)
T PRK06065 79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHR 158 (392)
T ss_pred CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHH
Confidence 875 899999999999999999999999999999999998863211 000 1111112
Q ss_pred hhhcCC------------------CCCCCCC-cccc--------------CCCCCcccccceeEEEecchHHHHhcCCeE
Q 013946 228 ALSQRN------------------NDPTKAS-RPWD--------------INRDGFVMGEGAGVLLLEELEHAKKRGAKI 274 (433)
Q Consensus 228 ~ls~~~------------------~~~~~~~-~pfd--------------~~~~G~~~geGaaalvL~~~~~A~~~g~~i 274 (433)
.+.+++ .+|.... +|.+ ..-+...++|||+++||.+++.|++.+.++
T Consensus 159 ym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~ 238 (392)
T PRK06065 159 YMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP 238 (392)
T ss_pred HHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC
Confidence 222211 1232211 1111 113556789999999999999998877554
Q ss_pred EEEEEEeeeccCCCCCCCC-CCChHHHHHHHHHHHHHcCCCC--CCccEEEeccCCCCCCCHHHHHHHHHH---------
Q 013946 275 YAEFRGGSFTSDAYHMTEP-HPDGVGVILCIEKALAHSGVSR--EDVNYINAHATSTPAGDIKEYQALIHC--------- 342 (433)
Q Consensus 275 ~a~i~g~~~~~d~~~~~~~-~~~~~~~~~ai~~al~~agl~~--~dId~v~~h~~gt~~~D~~E~~al~~~--------- 342 (433)
..|+|++...+....... .........+.+++|+++|+++ +|||++|+|++.+. .|+..++..
T Consensus 239 -v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~~ 313 (392)
T PRK06065 239 -VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEAP 313 (392)
T ss_pred -EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcHH
Confidence 458998876554322211 1223345689999999999985 99999999999885 444444322
Q ss_pred --HcC-----CCCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCc-cE
Q 013946 343 --FGQ-----NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEV-KA 412 (433)
Q Consensus 343 --~~~-----~~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 412 (433)
+.+ ...+|++...+. .||+.+|+|+.+++++++||+... ...|-.+. ++
T Consensus 314 ~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~~~ 372 (392)
T PRK06065 314 KLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQVKKPVHT 372 (392)
T ss_pred HHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcCCCccce
Confidence 101 113455544444 499999999999999999998721 11122234 68
Q ss_pred EEEeccc-ccceeeeeEEc
Q 013946 413 ALSNSFG-FGGHNSSIIFS 430 (433)
Q Consensus 413 ~l~~s~g-~gG~n~~~vl~ 430 (433)
++++++| .+..++.+||+
T Consensus 373 ~l~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 373 GVAQAWGDLMQAGTVIVLR 391 (392)
T ss_pred eEEeccccccceeEEEEec
Confidence 8888887 44455566664
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-23 Score=204.03 Aligned_cols=285 Identities=19% Similarity=0.219 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+|||+++++|| +|++|+..+.... . ....... .. ....
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID-------~vi~g~~~~~~~~---------------~----~~~~~~~-~~--~~~~ 76 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIE-------VVHVGNFFGELFA---------------G----QGHLGAM-PA--TVHP 76 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc---------------c----ccccchH-HH--HHhh
Confidence 367999999999999999999888 8998875322100 0 0000011 11 1223
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh------h--------------------HHHH
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG------L--------------------GGFV 224 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~------~--------------------~~~~ 224 (433)
++.| |+++|+++|+|++.||..|+.+|++|++|++||+|+|.+..... + .++.
T Consensus 77 ~~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 156 (403)
T PRK06289 77 ALWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARV 156 (403)
T ss_pred cCCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHH
Confidence 4444 89999999999999999999999999999999999886432100 0 0000
Q ss_pred HhhhhhcC------------------CCCCCCCCc------ccc--------------CCCCCcccccceeEEEecchHH
Q 013946 225 ACRALSQR------------------NNDPTKASR------PWD--------------INRDGFVMGEGAGVLLLEELEH 266 (433)
Q Consensus 225 ~~~~ls~~------------------~~~~~~~~~------pfd--------------~~~~G~~~geGaaalvL~~~~~ 266 (433)
....+.++ ..+|....+ |.+ ...+...++|||+++||.+++.
T Consensus 157 a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~ 236 (403)
T PRK06289 157 ADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAY 236 (403)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHH
Confidence 00111111 112221111 111 0124455789999999999999
Q ss_pred HHhcCC-eEEEEEEEeeeccCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHH
Q 013946 267 AKKRGA-KIYAEFRGGSFTSDAYHMTE------PHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 338 (433)
Q Consensus 267 A~~~g~-~i~a~i~g~~~~~d~~~~~~------~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~a 338 (433)
|++.+. ++.++|+|++..++...... .++ .......+.++||++|||+++|||++|+|+..+. .|+..
T Consensus 237 a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~ 312 (403)
T PRK06289 237 LRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLA 312 (403)
T ss_pred HHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHH
Confidence 987765 56689999988755332211 111 2233567999999999999999999999999886 44444
Q ss_pred HHHH-HcC---------------CCCcccccchhhh--hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 339 LIHC-FGQ---------------NRGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 339 l~~~-~~~---------------~~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
++.. |.. ...+|++...+.+ ||+.||+|+.++++++.||+..-
T Consensus 313 le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a------------------- 373 (403)
T PRK06289 313 IDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA------------------- 373 (403)
T ss_pred HHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc-------------------
Confidence 4333 221 1235666655554 99999999999999999998621
Q ss_pred cCCcccccCccEEEEeccc-ccceeeeeEEc
Q 013946 401 VGPKKERLEVKAALSNSFG-FGGHNSSIIFS 430 (433)
Q Consensus 401 ~~~~~~~~~~~~~l~~s~g-~gG~n~~~vl~ 430 (433)
...+-...+.+++.+.| .+|.+..+|++
T Consensus 374 --g~~Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 374 --GDYQVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred --cCccCCchheEEEEecCcccceEEEEEEe
Confidence 01111234567777766 55556666664
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=204.92 Aligned_cols=271 Identities=18% Similarity=0.233 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+|+|+++++|| ++++|+..... .....+..++..+|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID-------~vi~g~~~~~~-------------------------~~~~~a~~~~~~~G 74 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ-------EVIMGNVIQAG-------------------------VGQNPAGQAAYHAG 74 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------ccCcHHHHHHHHCC
Confidence 56889999999999999999898 89998653110 01122566888999
Q ss_pred CCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-h------h--h---h--------H---------
Q 013946 173 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-P------I--G---L--------G--------- 221 (433)
Q Consensus 173 l~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~------~--~---~--------~--------- 221 (433)
+.. |.++++++|+||+.|+..|+++|++|++|++||+|+|.+.. | . . . .
T Consensus 75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (388)
T PRK06366 75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLID 154 (388)
T ss_pred CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccc
Confidence 964 99999999999999999999999999999999999887431 0 0 0 0 0
Q ss_pred -------HHHHhhhhhcCC------------------CCCCC-CC---------------------------cc-cc---
Q 013946 222 -------GFVACRALSQRN------------------NDPTK-AS---------------------------RP-WD--- 244 (433)
Q Consensus 222 -------~~~~~~~ls~~~------------------~~~~~-~~---------------------------~p-fd--- 244 (433)
++...+.+.+++ .+|.. .. +| |+
T Consensus 155 ~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g 234 (388)
T PRK06366 155 AFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNG 234 (388)
T ss_pred cccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCC
Confidence 000000111110 01221 11 11 11
Q ss_pred --CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 013946 245 --INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 322 (433)
Q Consensus 245 --~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~ 322 (433)
...+...++|||+++||.+++.|++.+.++.++|+|++........ .......+++++|+++||+++|||++|
T Consensus 235 ~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-----~~~~~~~A~~~al~~Agl~~~DiDv~E 309 (388)
T PRK06366 235 ILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-----FVEAPIPATRKLLEKQNKSIDYYDLVE 309 (388)
T ss_pred CEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-----hcccHHHHHHHHHHHcCCCHHHcceee
Confidence 1124455799999999999999999888888899999887542211 111236899999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 323 AHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 323 ~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
+|...+. .|+..++.+-=+..+++++..--.+||+.||+|+.+++.++.+|+. .
T Consensus 310 i~daFa~----~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~---------------------~- 363 (388)
T PRK06366 310 HNEAFSI----ASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKT---------------------R- 363 (388)
T ss_pred ccchhHH----HHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh---------------------c-
Confidence 9998886 5666555442122255555555556999999999999999999975 0
Q ss_pred CcccccCccEEEEecccccceeeeeEEccC
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++.+...-||.-.++||++.
T Consensus 364 ------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (388)
T PRK06366 364 ------HMKTGLATLCHGGGGAHTLTLEMV 387 (388)
T ss_pred ------CCCeEEEEEecccChhhEEEEEec
Confidence 135677777788889999999875
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-23 Score=202.24 Aligned_cols=270 Identities=18% Similarity=0.195 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+|+|+++++|| +|++|+... . ... ....+.......|
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID-------~vv~g~~~~-~----------------------~~~-~~~~~~~~~l~~g 75 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD-------DVIFGCVDT-I----------------------GPQ-AGNIARTSWLAAG 75 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEeecc-C----------------------Ccc-cccHHHHHHHHcC
Confidence 56889999999999999999888 888885310 0 000 0112222223344
Q ss_pred C--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh--h------------------h-HHH-----
Q 013946 173 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI--G------------------L-GGF----- 223 (433)
Q Consensus 173 l--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~--~------------------~-~~~----- 223 (433)
+ ..|.++|+++|+|++.|+..|+++|++|++|++||+|+|.+.. +. . + ..+
T Consensus 76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (382)
T PRK07801 76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEV 155 (382)
T ss_pred CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCC
Confidence 4 4588999999999999999999999999999999999985422 10 0 0 000
Q ss_pred ----HHhhhhhcCCC------------------CCCC----------------------------CCcccc-----CCCC
Q 013946 224 ----VACRALSQRNN------------------DPTK----------------------------ASRPWD-----INRD 248 (433)
Q Consensus 224 ----~~~~~ls~~~~------------------~~~~----------------------------~~~pfd-----~~~~ 248 (433)
.....+.+++. +|.. ..+|.. ...+
T Consensus 156 ~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d 235 (382)
T PRK07801 156 SQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAV 235 (382)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCccccc
Confidence 00001111100 0000 011211 1235
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 328 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt 328 (433)
...++|||+++||++++.|++.+.+++++|.+++...+.... ...+...++++||+++|++++|||++|+|...+
T Consensus 236 ~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa 310 (382)
T PRK07801 236 ASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVF-----MLTAPIPATRYALEKTGLSIDDIDVVEINEAFA 310 (382)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHh-----hccChHHHHHHHHHHcCCCHHHcCEeeecccch
Confidence 566789999999999999999888788999998765432110 111234789999999999999999999999888
Q ss_pred CCCCHHHHHHHHHHHc-CCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccc
Q 013946 329 PAGDIKEYQALIHCFG-QNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 407 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~-~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 407 (433)
. .|...++.. + ..++++++.....+||+.||+|+.+++.++.+|+..
T Consensus 311 ~----~~~~~~e~l-G~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~--------------------------- 358 (382)
T PRK07801 311 P----VVLAWLKET-GADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT--------------------------- 358 (382)
T ss_pred H----HHHHHHHHh-CCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 5 555555544 3 224677888888889999999999999999999860
Q ss_pred cCccEEEEecccccceeeeeEEcc
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++.++.|.||...++||++
T Consensus 359 -~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 359 -GGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred -CCCEEEEEEcccccceeEEEEEe
Confidence 13577888888889999999875
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-23 Score=201.78 Aligned_cols=290 Identities=18% Similarity=0.175 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| +++++...... .-.+.....++..+|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID-------~vv~~~~~~~~------------------------~g~~~~~~~~~~~lG 86 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID-------GSVASYFSDHF------------------------QRQLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEecccccc------------------------cccchhhHHHHHhcC
Confidence 46899999999999999999888 77766432100 001222334678999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-------------------------HHHHHh
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL-------------------------GGFVAC 226 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~-------------------------~~~~~~ 226 (433)
++. |+++|+++|+|+..||..|+++|++|++|+|||+|+|.+...... .++...
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 986 888999999999999999999999999999999999964321100 001011
Q ss_pred hhhhcCCC------------------CCCCC-Ccccc--------------CCCCCcccccceeEEEecchHHHHhcCCe
Q 013946 227 RALSQRNN------------------DPTKA-SRPWD--------------INRDGFVMGEGAGVLLLEELEHAKKRGAK 273 (433)
Q Consensus 227 ~~ls~~~~------------------~~~~~-~~pfd--------------~~~~G~~~geGaaalvL~~~~~A~~~g~~ 273 (433)
+++.+++. +|... ..|.+ ...+...++|||+++||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 11111110 12111 01111 11344557899999999999999887655
Q ss_pred EEEEEEEeeeccCCCCCCCC-----------------------CCChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCC
Q 013946 274 IYAEFRGGSFTSDAYHMTEP-----------------------HPDGVGVILCIEKALAHSGVS--REDVNYINAHATST 328 (433)
Q Consensus 274 i~a~i~g~~~~~d~~~~~~~-----------------------~~~~~~~~~ai~~al~~agl~--~~dId~v~~h~~gt 328 (433)
+ ..|++++...++...... .........+++++|+++||+ ++|||++|+|.+.+
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa 325 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYT 325 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCc
Confidence 4 445666655443221110 112234468999999999997 79999999999988
Q ss_pred CCCCHHHHHHHHHH-HcCC---------------CCcccccchhhh--hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCC
Q 013946 329 PAGDIKEYQALIHC-FGQN---------------RGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRTGWIHPNINLEN 390 (433)
Q Consensus 329 ~~~D~~E~~al~~~-~~~~---------------~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~ 390 (433)
. .|...++.+ |..+ ..+||+..-+.+ ||+.||+|+.++++++++|+..--+- -
T Consensus 326 ~----~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~-~---- 396 (430)
T PRK06365 326 S----SEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKH-F---- 396 (430)
T ss_pred H----HHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCC-C----
Confidence 6 555444433 1110 135665555554 99999999999999999999732100 0
Q ss_pred CCCCCCCccccCCcccccCccEEEEeccc-ccceeeeeEEccCC
Q 013946 391 PDAVVDTNVLVGPKKERLEVKAALSNSFG-FGGHNSSIIFSPYK 433 (433)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~g-~gG~n~~~vl~~~~ 433 (433)
-....|-.+.++++++++| .+..++++||++.+
T Consensus 397 ----------~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 397 ----------HDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred ----------CcccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 0000112246688888886 45567778888764
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-23 Score=199.41 Aligned_cols=278 Identities=20% Similarity=0.182 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+||||++++|| +++.+... +.. ....++..+|
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~-------------------------~~~----~~~~~~~~lG 69 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD-------GYFCAGDA-------------------------PGL----GPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEcCCC-------------------------CCc----cHHHHHHhCC
Confidence 56899999999999999998887 65542110 000 0134888999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh---h------------------------hHHHH
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI---G------------------------LGGFV 224 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~---~------------------------~~~~~ 224 (433)
+++ +...++++|+|+..+|..|+.+|++|.+|+|||++.|...... . +..+.
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 976 7788999999999999999999999999999999988632110 0 00011
Q ss_pred HhhhhhcCC------------------CCCCCC-CccccC--------------CCCCcccccceeEEEecchHHHHhcC
Q 013946 225 ACRALSQRN------------------NDPTKA-SRPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRG 271 (433)
Q Consensus 225 ~~~~ls~~~------------------~~~~~~-~~pfd~--------------~~~G~~~geGaaalvL~~~~~A~~~g 271 (433)
....+.+++ .+|... .+|++. ..++..++|||+++||.+++.|++.+
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~ 229 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK 229 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC
Confidence 111111111 123221 112211 13566679999999999999998876
Q ss_pred CeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-Hc------
Q 013946 272 AKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FG------ 344 (433)
Q Consensus 272 ~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~------ 344 (433)
++.++|+|++..++......++........++++||++||++++|||++|+|++.+. .|...++.+ |.
T Consensus 230 -~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~~ 304 (388)
T PRK08142 230 -RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEGG 304 (388)
T ss_pred -CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCchH
Confidence 455899999988775543344444455678999999999999999999999999986 455444332 11
Q ss_pred ----CC------CCcccccchhhh--hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccE
Q 013946 345 ----QN------RGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412 (433)
Q Consensus 345 ----~~------~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (433)
+. ..+|++..-+.+ ||+.+|+|+.+++++++||+...- ...|-.+.++
T Consensus 305 ~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag--------------------~~rQV~~a~~ 364 (388)
T PRK08142 305 KFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAH--------------------PAVQVPNCDL 364 (388)
T ss_pred HHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCC--------------------CCCCCCCCcE
Confidence 10 236775555544 899999999999999999986210 0011224678
Q ss_pred EEEecccc-cc---eeeeeEEcc
Q 013946 413 ALSNSFGF-GG---HNSSIIFSP 431 (433)
Q Consensus 413 ~l~~s~g~-gG---~n~~~vl~~ 431 (433)
+++.+.|. .| .++.+||++
T Consensus 365 gl~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 365 ALAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred EEEeCCCCCCcCCCceEEEEEec
Confidence 89888763 22 335666654
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=201.51 Aligned_cols=271 Identities=20% Similarity=0.255 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+++|+++++|| .|++|+.... .....++..++..+|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID-------~vi~G~~~~~-------------------------~~~~~~ar~~a~~aG 77 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG 77 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCC-------------------------CCccHHHHHHHHHCC
Confidence 56889999999999999999888 8999975310 001224556888999
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh--H---------------------------
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL--G--------------------------- 221 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~--~--------------------------- 221 (433)
+. + |.++|+++|+||+.|+..|+++|++|++|++||+|+|.+...... .
T Consensus 78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T PRK08963 78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRL 157 (428)
T ss_pred CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccch
Confidence 96 4 999999999999999999999999999999999999976432100 0
Q ss_pred --------HH-----------HHhhhhhcCCC------------------C----------------CCC-------CCc
Q 013946 222 --------GF-----------VACRALSQRNN------------------D----------------PTK-------ASR 241 (433)
Q Consensus 222 --------~~-----------~~~~~ls~~~~------------------~----------------~~~-------~~~ 241 (433)
.+ .....+.+++. + |.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r 237 (428)
T PRK08963 158 RDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIR 237 (428)
T ss_pred hhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCC
Confidence 00 00000000000 0 111 011
Q ss_pred ------------c-cc------CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHH
Q 013946 242 ------------P-WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 302 (433)
Q Consensus 242 ------------p-fd------~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 302 (433)
| |+ ...+...++|||+++||++++.|++.+.++.++|.+++....... .+ .......
T Consensus 238 ~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~---~~-~~~~~~~ 313 (428)
T PRK08963 238 GDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVW---QD-MLLGPAY 313 (428)
T ss_pred CCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCch---hh-hhhHHHH
Confidence 1 11 112445579999999999999999999888899999887641110 01 1234467
Q ss_pred HHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHH---------cCC---CCc---ccccchh--hhhhHhhhH
Q 013946 303 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF---------GQN---RGL---RVNSTKS--MIGHLLGAA 365 (433)
Q Consensus 303 ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~---------~~~---~~~---~v~s~k~--~~Gh~~~as 365 (433)
+++++|+++|++++|||++|+|...+. .|+..++..- +.. ..+ |++..-+ .+||+.||+
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gas 389 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAAT 389 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 899999999999999999999999884 4444443331 100 113 4444444 459999999
Q ss_pred HHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 366 GAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 366 G~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
|+..+++++++|+.. ..++++++..+-||...++||++
T Consensus 390 G~~~~~e~~~qLrg~----------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 390 GARMITQTLHELRRR----------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHHHHHHHhhc----------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 999999999999751 12468888888899999999985
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=197.10 Aligned_cols=271 Identities=16% Similarity=0.153 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+++|+++++|| .+++|+.... .......+..+...-|
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-------~vi~G~~~~~------------------------~~~~~~~ar~~~l~~g 75 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-------DVIMGCVSQV------------------------GEQATNVARNAVLASK 75 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence 56889999999999999999888 8999975310 0000112223333335
Q ss_pred C--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhh----------------------------H
Q 013946 173 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL----------------------------G 221 (433)
Q Consensus 173 l--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~----------------------------~ 221 (433)
| .-|.++|+.+|+||+.|+..|+++|++|++|++||+|+|.+.. |... .
T Consensus 76 l~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 76 LPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQ 155 (390)
T ss_pred CCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCH
Confidence 5 3499999999999999999999999999999999999997643 2100 0
Q ss_pred HHHHhhhhhcCCC---------------------------------------CC-----CC------------CCccccC
Q 013946 222 GFVACRALSQRNN---------------------------------------DP-----TK------------ASRPWDI 245 (433)
Q Consensus 222 ~~~~~~~ls~~~~---------------------------------------~~-----~~------------~~~pfd~ 245 (433)
.+.......+++. +| ++ ..+|...
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 0000000000000 00 00 1123311
Q ss_pred -----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 013946 246 -----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320 (433)
Q Consensus 246 -----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~ 320 (433)
..+...++|||+++||.+++.|++.+.++.++|.+++...... .....+...+++++|+++|++++|||+
T Consensus 236 ~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~Did~ 310 (390)
T PRK06504 236 GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDP-----VIMLEAPLPATERALKKAGMKIDDIDL 310 (390)
T ss_pred CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCc-----hhhhccHHHHHHHHHHHcCCCHHHCCE
Confidence 1345567899999999999999988877777788776553321 112234567999999999999999999
Q ss_pred EEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCcc
Q 013946 321 INAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 399 (433)
Q Consensus 321 v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 399 (433)
+|+|...+. .|...++.+ +- .++++++...-.+||+.||+|+.++..++.+|++.
T Consensus 311 ~Ei~d~Fa~----~~l~~~e~l-G~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~------------------- 366 (390)
T PRK06504 311 YEVNEAFAS----VPLAWLKAT-GADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR------------------- 366 (390)
T ss_pred EEecccchH----HHHHHHHHh-CCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh-------------------
Confidence 999999886 555555444 32 23577777777789999999999999999999851
Q ss_pred ccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 400 LVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 400 ~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++.++.|.||..+++||+++
T Consensus 367 ---------~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 367 ---------GKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred ---------CCCeEEEEEeecccceeEEEEEeC
Confidence 235677787877888888998763
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-23 Score=202.36 Aligned_cols=270 Identities=21% Similarity=0.301 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|+|+++++|| +||+|+.... .. ....+..++..+|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID-------~vi~g~~~~~-----------------------~~--~~~~a~~v~~~lG 75 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD-------EVILGCAMPS-----------------------PD--EANIARVVALRLG 75 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-----------------------CC--cChHHHHHHHHhC
Confidence 67899999999999999999888 8999865310 00 1234567889999
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh---h---------------------------
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---G--------------------------- 219 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~---~--------------------------- 219 (433)
+. .|.++|+++|+|++.+|..|+++|++|++|++||+|+|.+.. |. .
T Consensus 76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (426)
T PRK08170 76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRP 155 (426)
T ss_pred cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccc
Confidence 94 399999999999999999999999999999999999995332 10 0
Q ss_pred --------------------hHHHHHhhhhhcC----------------C--C------------------CCCC-----
Q 013946 220 --------------------LGGFVACRALSQR----------------N--N------------------DPTK----- 238 (433)
Q Consensus 220 --------------------~~~~~~~~~ls~~----------------~--~------------------~~~~----- 238 (433)
..++.....+.++ + . +|..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~ 235 (426)
T PRK08170 156 SYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGV 235 (426)
T ss_pred cccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCC
Confidence 0000000000000 0 0 0100
Q ss_pred ----------CCcc-ccC------CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHH
Q 013946 239 ----------ASRP-WDI------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVI 301 (433)
Q Consensus 239 ----------~~~p-fd~------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~ 301 (433)
..+| |+. ..+...++|||+++||++++.|++.+.++.++|.+++...... ...+.+..
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~-----~~~~~~~~ 310 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDP-----SQMGLGPV 310 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCc-----hhhcccHH
Confidence 0111 220 1455667999999999999999999888888999887654321 12223456
Q ss_pred HHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH----H-----------cCCCCcccccchhh--hhhHhhh
Q 013946 302 LCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC----F-----------GQNRGLRVNSTKSM--IGHLLGA 364 (433)
Q Consensus 302 ~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~----~-----------~~~~~~~v~s~k~~--~Gh~~~a 364 (433)
.+++++|+++||+++|||++|+|...+. .|+..+... | |.-...|++..-+. +||+.||
T Consensus 311 ~a~~~al~~aGl~~~did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GA 386 (426)
T PRK08170 311 HAATPLLQRHGLTLEDLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGA 386 (426)
T ss_pred HHHHHHHHHcCCCHHHcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccC
Confidence 8999999999999999999999998875 444222211 1 10111344444443 5999999
Q ss_pred HHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 365 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 365 sG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+|+.++..++.+|++ .+.++++++...-||.-.++||++
T Consensus 387 tG~~~~~~l~~~l~~----------------------------~~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 387 SGARIVLHLLHALKR----------------------------RGTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred ccHHHHHHHHHHHHh----------------------------hCCCeEEEEEecCCChhheEEEEe
Confidence 999999999999975 123578888888889999999986
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=197.85 Aligned_cols=281 Identities=21% Similarity=0.239 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+..++++||+++|++|++|| .|++|+...... . .+.....+...+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID-------~vi~g~~~~~~~----------------------g--~~~~~~~~~~~l 71 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVE-------EACLGQVLGAGE----------------------G--QNCAQQAAMHAG 71 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEccCCcc----------------------c--CcHHHHHHHHcC
Confidence 467889999999999999999888 889987642210 0 111111256677
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-h------------------------hHHHHH
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G------------------------LGGFVA 225 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~------------------------~~~~~~ 225 (433)
|+.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+.... . +..+..
T Consensus 72 g~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~ 151 (393)
T cd00826 72 GLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAG 151 (393)
T ss_pred CCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHH
Confidence 8876 9999999999999999999999999999999999999753210 0 000000
Q ss_pred hhhhhcC-------------C--------CCCCCCC------------ccc----c--CCCCCcccccceeEEEecchHH
Q 013946 226 CRALSQR-------------N--------NDPTKAS------------RPW----D--INRDGFVMGEGAGVLLLEELEH 266 (433)
Q Consensus 226 ~~~ls~~-------------~--------~~~~~~~------------~pf----d--~~~~G~~~geGaaalvL~~~~~ 266 (433)
...+.++ + .+|.... +|. + ...+...++|||+++||.+++.
T Consensus 152 ~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~ 231 (393)
T cd00826 152 AEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAE 231 (393)
T ss_pred HHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHH
Confidence 1111111 1 0122111 111 1 1134455689999999999999
Q ss_pred HHhcCC-eEEEEEEEeeeccCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 267 AKKRGA-KIYAEFRGGSFTSDAYH-MTEPH----PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 267 A~~~g~-~i~a~i~g~~~~~d~~~-~~~~~----~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.+. ....+|.+.+...+... ...+. ....+...+++++|+++||+++|||++|+|...+. .|+..++
T Consensus 232 a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~e 307 (393)
T cd00826 232 AQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATNE 307 (393)
T ss_pred HHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHHH
Confidence 987763 12244555444332211 11111 12334578999999999999999999999998775 5555554
Q ss_pred HH-HcCC---------------CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 341 HC-FGQN---------------RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 341 ~~-~~~~---------------~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
.+ |... ..+||+..-+. +||+.||+|+.++++++++|+...
T Consensus 308 ~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a--------------------- 366 (393)
T cd00826 308 ALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA--------------------- 366 (393)
T ss_pred HhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh---------------------
Confidence 43 2110 12555555554 499999999999999999997511
Q ss_pred CcccccCccEEEEecccccceeeeeEEc
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
...+..+.+++++++.| |..+++|++
T Consensus 367 g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 11112235778877766 456666665
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=197.16 Aligned_cols=252 Identities=19% Similarity=0.193 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .+++++.... ......+..++..
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-------~li~~~~~~~-------------------------~~~p~~a~~v~~~ 141 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-------AVIVACSNMQ-------------------------RAYPAMAIEIQQA 141 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCcHHHHHHHHh
Confidence 3467999999999999999998777 7888765311 1122346779999
Q ss_pred hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 171 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 171 lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
+|+++++++++.+|+|++.||..|+++|++|.+|.+||+++|.+. .. . -|+....++
T Consensus 142 Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s-~~----------~------------~~~d~~~~~ 198 (372)
T PRK07515 142 LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICS-GH----------L------------NFRDRDSHF 198 (372)
T ss_pred cCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeeccc-cc----------c------------cccCCCCCE
Confidence 999999999999999999999999999999999999999999731 10 0 022233679
Q ss_pred ccccceeEEEecchHHHHhcC-CeEEEEEEEe------------eeccCCCCCCCCCC----ChHH--------HHHHHH
Q 013946 251 VMGEGAGVLLLEELEHAKKRG-AKIYAEFRGG------------SFTSDAYHMTEPHP----DGVG--------VILCIE 305 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~------------~~~~d~~~~~~~~~----~~~~--------~~~ai~ 305 (433)
++||||+|+||++.+.+..++ ..++...... ....+..+...+.+ ++.. +..+|+
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999866543222 2444433111 00001111111111 2322 568899
Q ss_pred HHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCC
Q 013946 306 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHP 384 (433)
Q Consensus 306 ~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 384 (433)
++|+++|++++|||||.+|.+++...|.+ ++++|+.. ..-.....-..+||+.+|+=.+.|... +. .+
T Consensus 279 ~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~----~~-~~-- 347 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH----SD-DL-- 347 (372)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH----hc-cC--
Confidence 99999999999999999999999987764 34445532 111112235678999988765544432 11 10
Q ss_pred CCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 385 NINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+.++..+||.|-+-.+++|++
T Consensus 348 -----------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -----------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -----------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 012467778888887767777765
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=189.80 Aligned_cols=277 Identities=17% Similarity=0.182 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHhCC-CCc-ccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 93 MLYLLTAGKKALADGG-ITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAg-l~~-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..|+.+|+++||+||| +++ ++|| ++++++.. .. .. .......++..
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId-------~~~~~~~~-~~----------------------~~--~~~~~~~~~~~ 73 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD-------SFISCQED-FW----------------------EG--IAIADEFAPDQ 73 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC-------EEEEecCc-cc----------------------Cc--ccccchhHHHH
Confidence 5689999999999999 987 6788 78775421 00 00 00111235677
Q ss_pred hCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc------------------h------hhhHHHHH
Q 013946 171 LGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI------------------P------IGLGGFVA 225 (433)
Q Consensus 171 lgl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~------------------~------~~~~~~~~ 225 (433)
+|+.+ |.+.+ |+|+..++..|+.+|++|.+|+|||+|.+.+.. | ..+.++..
T Consensus 74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 88854 77776 889999999999999999999999999885321 1 00112222
Q ss_pred hhhhhcCCC------------------CCCCCC-cccc--------------CCCCCcccccceeEEEecchHHHHhcCC
Q 013946 226 CRALSQRNN------------------DPTKAS-RPWD--------------INRDGFVMGEGAGVLLLEELEHAKKRGA 272 (433)
Q Consensus 226 ~~~ls~~~~------------------~~~~~~-~pfd--------------~~~~G~~~geGaaalvL~~~~~A~~~g~ 272 (433)
.+.+.+++. +|.... +|.+ ...+...++|||+++||.+++.|++.+.
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~ 230 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTD 230 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCC
Confidence 222222211 232211 1111 1146667899999999999999988776
Q ss_pred eEEEEEEEeeeccCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCCCCHHHHHHHHHH-HcC---
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHP-DGVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FGQ--- 345 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~-~~~~~~~ai~~al~~agl~--~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~--- 345 (433)
++. +|+|++...+.......+. .......+.+++|+++||+ ++|||++|+|+..+. .|+..++.+ |..
T Consensus 231 ~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~Ge 305 (385)
T PRK06066 231 DPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEPE 305 (385)
T ss_pred CCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCCc
Confidence 654 8999887655332211111 2233457999999999998 699999999999886 444444332 111
Q ss_pred ------------CCCcccccchhhh--hhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCcc
Q 013946 346 ------------NRGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVK 411 (433)
Q Consensus 346 ------------~~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (433)
...+|++...+.+ ||+.||+|+.+++++++||+..- ...| .+.+
T Consensus 306 ~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A---------------------g~rQ-~~a~ 363 (385)
T PRK06066 306 KDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA---------------------GARQ-GKAE 363 (385)
T ss_pred hHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc---------------------cccC-CCCc
Confidence 0235665555554 99999999999999999998721 1122 3567
Q ss_pred EEEEeccc--ccceeeeeEEcc
Q 013946 412 AALSNSFG--FGGHNSSIIFSP 431 (433)
Q Consensus 412 ~~l~~s~g--~gG~n~~~vl~~ 431 (433)
++++.+.| +++..+..|+++
T Consensus 364 ~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 364 RAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred EEEEcCCCccCCccEEEEEEeC
Confidence 88888776 556667777764
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=191.39 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+++++||+++|+++++|| .+++|+.... .....++..++...|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id-------~vi~G~~~~~-------------------------~~~~~~ar~~~l~aG 79 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG 79 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCc-------------------------CccchHHHHHHHhCC
Confidence 56889999999999999999888 7899875310 011235566666789
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhhH----------------H-----------
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLG----------------G----------- 222 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~----------------~----------- 222 (433)
+. + |.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. |..+. .
T Consensus 80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T TIGR02446 80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGL 159 (430)
T ss_pred CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchh
Confidence 86 4 89999999999999999999999999999999999998742 11000 0
Q ss_pred ---HH------------Hhhh-----hhcCC----------------------------------CCCCCCC-------c
Q 013946 223 ---FV------------ACRA-----LSQRN----------------------------------NDPTKAS-------R 241 (433)
Q Consensus 223 ---~~------------~~~~-----ls~~~----------------------------------~~~~~~~-------~ 241 (433)
+. .++. +.+++ .+|.... |
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r 239 (430)
T TIGR02446 160 KDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIR 239 (430)
T ss_pred hhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCC
Confidence 00 0000 00000 0111000 1
Q ss_pred ------------c-cc------CCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHH
Q 013946 242 ------------P-WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 302 (433)
Q Consensus 242 ------------p-fd------~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 302 (433)
| |+ ...+...++|||+++||.+++.|++.+.++.++|++++........ . . ......
T Consensus 240 ~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~-~-~--~~~~~~ 315 (430)
T TIGR02446 240 HNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQ-D-M--LMGPSY 315 (430)
T ss_pred CCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchH-h-h--cccHHH
Confidence 1 11 1234566799999999999999998887888899998765321100 0 1 112357
Q ss_pred HHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH----HcCC--------CCc---ccccchh--hhhhHhhhH
Q 013946 303 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC----FGQN--------RGL---RVNSTKS--MIGHLLGAA 365 (433)
Q Consensus 303 ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~----~~~~--------~~~---~v~s~k~--~~Gh~~~as 365 (433)
+++++|+++|++++|||++|+|...+. .|+..++.+ |-.. ..+ |++..-+ ..||+.||+
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gat 391 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAAT 391 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 899999999999999999999999886 555555444 1100 113 4444444 459999999
Q ss_pred HHHHHHHHHHHHHc
Q 013946 366 GAVEAIAVVQAIRT 379 (433)
Q Consensus 366 G~~~l~~~~~~l~~ 379 (433)
|+.++++++.+|+.
T Consensus 392 G~~~v~e~~~qL~g 405 (430)
T TIGR02446 392 GARMITQTLRELKR 405 (430)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999986
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-21 Score=182.97 Aligned_cols=265 Identities=19% Similarity=0.251 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+..+.+++++ |++ ++|| .||+|+..+.. ...+..++...|
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id-------~vi~G~~~~~~---------------------------~~~~r~~~~~~G 68 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REID-------DVILGNVVGPG---------------------------GNVARLSALEAG 68 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcC-------EEEEEecCCCc---------------------------chHHHHHHHHcC
Confidence 5577778888744 885 6777 89999754211 222445778888
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-----h---------HHHHHhhhhhcCC---
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-----L---------GGFVACRALSQRN--- 233 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-----~---------~~~~~~~~ls~~~--- 233 (433)
+. + |+++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... + .+......+.+++
T Consensus 69 l~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 148 (361)
T PRK06690 69 LGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITR 148 (361)
T ss_pred CCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCH
Confidence 86 5 99999999999999999999999999999999999998653110 0 0100000000000
Q ss_pred ------------------CCCC-------------CCC-------------cc-ccC-----CCCCcccccceeEEEecc
Q 013946 234 ------------------NDPT-------------KAS-------------RP-WDI-----NRDGFVMGEGAGVLLLEE 263 (433)
Q Consensus 234 ------------------~~~~-------------~~~-------------~p-fd~-----~~~G~~~geGaaalvL~~ 263 (433)
.+|. ... +| |+. ..+...++|||+++||.+
T Consensus 149 e~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s 228 (361)
T PRK06690 149 EMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVME 228 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEec
Confidence 0010 001 12 221 123445699999999999
Q ss_pred hHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHH
Q 013946 264 LEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF 343 (433)
Q Consensus 264 ~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~ 343 (433)
++.|++.+.++.++|.+++..... +.....+...+++++|+++|++++|||++|+|...+. .+...++..
T Consensus 229 ~e~A~~lg~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~e~l- 298 (361)
T PRK06690 229 EGQARKLGYKPVLRFVRSAVVGVD-----PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACAKEL- 298 (361)
T ss_pred HHHHHHcCCCceEEEEEEEEeccC-----cccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHHHhc-
Confidence 999999998888889998865421 1122346778999999999999999999999977664 333333322
Q ss_pred cC-CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccc
Q 013946 344 GQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGG 422 (433)
Q Consensus 344 ~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG 422 (433)
+- ..+++++...-.+||+.|++|+.+++.++.+|++. ..++++.+...-||
T Consensus 299 gl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~----------------------------~~~~g~~~~c~~gG 350 (361)
T PRK06690 299 QIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE----------------------------DMKYGIATLGIGGG 350 (361)
T ss_pred CCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh----------------------------CCCEEEEEEcccCc
Confidence 21 23566777777789999999999999999999750 23567777777888
Q ss_pred eeeeeEEccC
Q 013946 423 HNSSIIFSPY 432 (433)
Q Consensus 423 ~n~~~vl~~~ 432 (433)
.-.++|+++.
T Consensus 351 ~g~a~~~e~~ 360 (361)
T PRK06690 351 IGLALLFEKV 360 (361)
T ss_pred ceeEEEEEec
Confidence 8899999874
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-21 Score=184.33 Aligned_cols=270 Identities=18% Similarity=0.235 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+..+.+++|+++|++|++|| -|++|+.... ......++...+...|
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id-------~vi~G~~~~~------------------------g~~g~n~aR~~al~ag 78 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD-------DIIWSTSSQR------------------------GKQGGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEcCCCc------------------------CcccCcHHHHHHHhCC
Confidence 45777889999999999998888 7899976310 1112345777777888
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhhH-----H-----HH-------------Hh
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLG-----G-----FV-------------AC 226 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~-----~-----~~-------------~~ 226 (433)
|. -|.+||+..|+||+.||..|++.|++|++|++|+||+|++.. |+.+. + +. .+
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 83 499999999999999999999999999999999999998753 21000 0 00 00
Q ss_pred hh-----------------------------------hhc--------CC---CCCCCCC------------c-cccC--
Q 013946 227 RA-----------------------------------LSQ--------RN---NDPTKAS------------R-PWDI-- 245 (433)
Q Consensus 227 ~~-----------------------------------ls~--------~~---~~~~~~~------------~-pfd~-- 245 (433)
+. +.. .+ .+.+... + .|+.
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 00 000 00 0011111 1 2431
Q ss_pred ----CCCCc-------------------------ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC
Q 013946 246 ----NRDGF-------------------------VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 296 (433)
Q Consensus 246 ----~~~G~-------------------------~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~ 296 (433)
..+|. .++|||+++||++++.|++++.+++++|.|++...+.... .
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~ 313 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----M 313 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----h
Confidence 01232 3589999999999999999998899999999987543221 1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
+.+...+++++|+++|++++|||++|.|...+. ...+..+.++- ..+++++..+..+||+.|++|+..++.++.
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~-----~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~ 388 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAV-----VAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLD 388 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHH-----HHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHH
Confidence 223467999999999999999999999955442 12233334442 236778888889999999999999999999
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+|+.+ ..+++++.-.+.||.-.++||++
T Consensus 389 qL~~~----------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 389 ELERR----------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred HHHHh----------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 99650 13456777778899999999986
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=175.98 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=170.7
Q ss_pred CCEEEEecceecCcCC-CHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChh-hhhcCCHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGH-EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK-LSKRMDKFMLYLLTA 99 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~-~~~~~~~~~~l~l~a 99 (433)
..+.|+|+|...|.-. +.+++.+.+-.-...|..... |..+ ....-.....|+..|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG----------------------ir~R~~a~~~e~~s~la~~A 59 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG----------------------IRERRIAADDETTSDLAVEA 59 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecC----------------------CceeeecCCCccHHHHHHHH
Confidence 4678999999999984 444444222111111111100 1111 111234467899999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~ 178 (433)
+++||++||++|++|| .+|++|++ |....+..|..++..||+++ +.+
T Consensus 60 a~~AL~~Agi~~~dID-------lII~aT~t-------------------------pd~~~Ps~A~~vq~~LG~~~~~af 107 (323)
T COG0332 60 ARKALEDAGISPDDID-------LIIVATST-------------------------PDHLFPSTACLVQARLGLGGAPAF 107 (323)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEcCC-------------------------cccCCChHHHHHHHHhCCCCccee
Confidence 9999999999999998 88888875 22335667999999999988 999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
.+..+|++++.||..|..+|++|.++.+||+|.|.. |+. .-|+++...+++||||+|
T Consensus 108 Dl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~---------------S~~--------ld~~dR~t~vlFgDGAgA 164 (323)
T COG0332 108 DLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL---------------SRI--------LDWTDRDTCVLFGDGAGA 164 (323)
T ss_pred echhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHh---------------hcc--------CCHhhccceEEEcCCceE
Confidence 999999999999999999999999999999999983 211 114455688999999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCCCC-------------------CCCCCCh--------HHHHHHHHHHHHHc
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM-------------------TEPHPDG--------VGVILCIEKALAHS 311 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~-------------------~~~~~~~--------~~~~~ai~~al~~a 311 (433)
+||++.+ .+. . |+.+...+|+... .....++ ..+..+++++|+.+
T Consensus 165 vvl~~~~--~~~--~----i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~ 236 (323)
T COG0332 165 VVLEATE--DDN--G----ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKA 236 (323)
T ss_pred EEEecCC--CCc--C----eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999865 111 1 1222222221110 0011122 23567899999999
Q ss_pred CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHH
Q 013946 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAI 371 (433)
Q Consensus 312 gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~ 371 (433)
+++++|||++..|-... -=.+++.+.++-.. -.+...--.+|++.+||=-+.|.
T Consensus 237 ~l~~~dId~~vpHQan~-----ri~~~i~~~l~~~~-~k~~~~~~~yGNtsaAsiplaL~ 290 (323)
T COG0332 237 GLTPEDIDWFVPHQANL-----RIIEAIAKKLGIPE-EKVVVTVDKYGNTSAASIPLALD 290 (323)
T ss_pred CCCHHHCCEEccccccH-----HHHHHHHHHcCCCH-HHHhhHHHHhcccccchHHHHHH
Confidence 99999999999995433 33445555554321 11233334457887776444433
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-20 Score=182.71 Aligned_cols=276 Identities=18% Similarity=0.215 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH--
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-- 170 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-- 170 (433)
..|+.+++++||+++|+++++|| .+++|+..... . ....+..++..
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id-------~vv~G~~~~~~------------------------~-~~~~~r~~~l~~g 79 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG-------EVVAGAVLKHS------------------------R-DFNLTRECVLGSA 79 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC------------------------c-cccHHHHHHHHcC
Confidence 56889999999999999999888 89999753210 0 01133444444
Q ss_pred hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-hhH----------------------------
Q 013946 171 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-GLG---------------------------- 221 (433)
Q Consensus 171 lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~-~~~---------------------------- 221 (433)
++...|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... .+.
T Consensus 80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
T PRK09268 80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP 159 (427)
T ss_pred CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence 444579999999999999999999999999999999999999754211 000
Q ss_pred --------H----H--HHhhh-----hhcC-----------------------------CCCCC------CCC-------
Q 013946 222 --------G----F--VACRA-----LSQR-----------------------------NNDPT------KAS------- 240 (433)
Q Consensus 222 --------~----~--~~~~~-----ls~~-----------------------------~~~~~------~~~------- 240 (433)
. + ..++. +.++ ..+|. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e 239 (427)
T PRK09268 160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLE 239 (427)
T ss_pred ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHH
Confidence 0 0 00000 0000 00232 111
Q ss_pred -----cc-ccC-------CCCCcccccceeEEEecchHHHHhcCCeEEEEE-EEeeeccCCCCCCCCCCChHHHHHHHHH
Q 013946 241 -----RP-WDI-------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMTEPHPDGVGVILCIEK 306 (433)
Q Consensus 241 -----~p-fd~-------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~~~~~~~~~~~~ai~~ 306 (433)
+| |+. ..+...++|||+++||.+++.|++.+.++.++| .+.....+..... .. .......++++
T Consensus 240 ~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~-~~-~~~~~~~a~~~ 317 (427)
T PRK09268 240 KLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGK-EG-LLMAPAYAVPR 317 (427)
T ss_pred HHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccccc-ch-hhccHHHHHHH
Confidence 12 222 124456799999999999999998887776666 4555444432111 11 12244579999
Q ss_pred HHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-H-----------cCCCCcccccchhh--hhhHhhhHHHHHHHH
Q 013946 307 ALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-F-----------GQNRGLRVNSTKSM--IGHLLGAAGAVEAIA 372 (433)
Q Consensus 307 al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~-----------~~~~~~~v~s~k~~--~Gh~~~asG~~~l~~ 372 (433)
+|+++|++++|||++|+|...+. ....|+..+... | +....+|++..-+. +||+.||+|+..+++
T Consensus 318 a~~~AGl~~~Did~~Ei~d~Fa~-~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 318 LLARNGLTLQDFDFYEIHEAFAS-QVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHHHcCCCHHHCCEEEeccccHH-HHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 99999999999999999999885 222244333211 1 10112455555554 499999999999999
Q ss_pred HHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 373 VVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 373 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
++.+|+.. ..++++++...-||.-.++||++
T Consensus 397 ~~~QL~~~----------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEK----------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhc----------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 99999750 13578888888899999999874
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-20 Score=179.36 Aligned_cols=247 Identities=20% Similarity=0.288 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .+++++..+. ...+..+..++..
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~~-------------------------~~~p~~a~~v~~~ 98 (329)
T PRK07204 51 TSSYMGAEAAKKAVEDAKLTLDDID-------CIICASGTIQ-------------------------QAIPCTASLIQEQ 98 (329)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCccHHHHHHHH
Confidence 3567999999999999999998887 6788765321 1123557889999
Q ss_pred hCCCC---CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG---PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G---p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|+++ +++.++.+|+|++.||..|..+|++|.++.+||+++|..... ..++...
T Consensus 99 lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~-----------------------~~~~~~~ 155 (329)
T PRK07204 99 LGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVG-----------------------LNWGQNE 155 (329)
T ss_pred hCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCC-----------------------CCcccCc
Confidence 99974 789999999999999999999999999999999999973111 0122334
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEE-------------EEEEEeeeccCCCCCCCC-------CCChH--------H
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIY-------------AEFRGGSFTSDAYHMTEP-------HPDGV--------G 299 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~-------------a~i~g~~~~~d~~~~~~~-------~~~~~--------~ 299 (433)
+++++||||+|+||++.+.. ..+. ..+.+.+...+....... ..++. .
T Consensus 156 ~~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKY 231 (329)
T ss_pred ceEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHH
Confidence 57889999999999975421 1221 222222211111000000 01122 2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..++++++|+++|++++|||++..|..+.+. .+++.+.++-.. -.+......+||+.+|+=.+.|... ++.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~-e~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 302 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDE-ERFVTIFEDHGNMIAASIPVALFEA---IKQ 302 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCH-HHhhhhHhhhCcHHHHHHHHHHHHH---HHc
Confidence 4578999999999999999999999887753 446666666432 1234566788999988765555543 333
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+ .+.+.++..+||.|-+-.+++|+
T Consensus 303 g~~-------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 303 KKV-------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred CCC-------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 222 12356777899999888888875
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-19 Score=172.15 Aligned_cols=265 Identities=15% Similarity=0.143 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||++++||| +++.+.. +.+ ...... ...+...+|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID-------~~~~~~~-~~~----------------------~~~~~~--~~~~~~~~G 72 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG-------FWCSGSS-DYL----------------------AGRAFS--FISAIDSIG 72 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcc-ccc----------------------cccccc--hhhHHhhcc
Confidence 56899999999999999999887 6644321 000 000000 112345567
Q ss_pred CC-C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-----------------hh-----hhHHHHHhhh
Q 013946 173 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-----------------PI-----GLGGFVACRA 228 (433)
Q Consensus 173 l~-G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-----------------~~-----~~~~~~~~~~ 228 (433)
+. + |...++ ++|..||..|+.+|++|++|+|||.|.+.+.. |. .+..+.....
T Consensus 73 ~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~y 149 (352)
T PRK07937 73 AVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAG 149 (352)
T ss_pred CCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHH
Confidence 63 3 444555 36888999999999999999999999885321 11 0111111222
Q ss_pred hhcCC------------------CCCCCCCccccC--------------CCCCcccccceeEEEecchHHHHhcCCeEEE
Q 013946 229 LSQRN------------------NDPTKASRPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYA 276 (433)
Q Consensus 229 ls~~~------------------~~~~~~~~pfd~--------------~~~G~~~geGaaalvL~~~~~A~~~g~~i~a 276 (433)
+.+++ .+|....| ++. ..+...++|||+++||.+++.|++.+.++ +
T Consensus 150 m~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v 227 (352)
T PRK07937 150 LDAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-A 227 (352)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-E
Confidence 22221 13433222 211 13555689999999999999999887766 8
Q ss_pred EEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcCCCCccc-cc
Q 013946 277 EFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH-SGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQNRGLRV-NS 353 (433)
Q Consensus 277 ~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~-agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~~~~~v-~s 353 (433)
+|+|++...+.......+.. ...++++++++ ||++|+|||++|+|++.+. .|...++.+ |+...+++. +.
T Consensus 228 ~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~lGl~g~~pvN~~GG 300 (352)
T PRK07937 228 WITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREALGLGDKTKVNPSGG 300 (352)
T ss_pred EEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHcCCCCCCCcCCCcc
Confidence 99999887665432211111 12345566666 5999999999999999886 555555444 222223332 33
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccc--cceeeeeEEcc
Q 013946 354 TKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF--GGHNSSIIFSP 431 (433)
Q Consensus 354 ~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~--gG~n~~~vl~~ 431 (433)
.++ ||+.||+|+.+++++++||+.+ ..+++++++.|- +..++.+|++.
T Consensus 301 ~l~--ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 301 ALA--ANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHATSGPALQQNLVAVLEG 350 (352)
T ss_pred chh--cCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEecccccccceEEEEEEec
Confidence 343 9999999999999999999873 246788887763 34555566654
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-19 Score=174.38 Aligned_cols=242 Identities=19% Similarity=0.181 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||+++++|| ++++++.. . . ....++..+|
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~---------------------------~-~--~~~~l~~~lG 67 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD-------GLVTFTMD---------------------------T-N--PEIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCc---------------------------c-c--cHHHHHHHCC
Confidence 46889999999999999998888 67653210 0 0 0134888999
Q ss_pred CCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecc--cCC---c------------c---------h------h
Q 013946 173 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGS--DAA---V------------I---------P------I 218 (433)
Q Consensus 173 l~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~--d~~---~------------~---------~------~ 218 (433)
+++ +...|.++|+|+..+|..|+.+|++|++|+|||+|. +.. . . + .
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 345789999999999999999999999999999887 211 0 0 0 0
Q ss_pred hhHHHHHhhhhhcC------------------CCCCCCCC--ccccCC--------------CCCcccccceeEEEecch
Q 013946 219 GLGGFVACRALSQR------------------NNDPTKAS--RPWDIN--------------RDGFVMGEGAGVLLLEEL 264 (433)
Q Consensus 219 ~~~~~~~~~~ls~~------------------~~~~~~~~--~pfd~~--------------~~G~~~geGaaalvL~~~ 264 (433)
.+..+.....+.++ ..+|.... +|++.+ -+...++|||+++||.++
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~se 227 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSA 227 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecH
Confidence 00111111111111 11343321 233211 456678999999999999
Q ss_pred HHHHhcCCeEEEEEEEeeeccCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHH
Q 013946 265 EHAKKRGAKIYAEFRGGSFTSDAYHMT-----EPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 338 (433)
Q Consensus 265 ~~A~~~g~~i~a~i~g~~~~~d~~~~~-----~~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~a 338 (433)
+.|++.+.++ .+|+|++...+..... .++. .......++++||+++||+++|||++|+|++.+. .|...
T Consensus 228 e~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~ 302 (386)
T PRK07855 228 ERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQ 302 (386)
T ss_pred HHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHH
Confidence 9998876554 5899998765432111 1111 1234457999999999999999999999999986 55554
Q ss_pred HHHH-H----------cC-----CCCcccccchhhh--hhHhhhHHHHHHHHHHHHHHc
Q 013946 339 LIHC-F----------GQ-----NRGLRVNSTKSMI--GHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 339 l~~~-~----------~~-----~~~~~v~s~k~~~--Gh~~~asG~~~l~~~~~~l~~ 379 (433)
++.+ | .+ ...+|++..-+.+ ||+. |+.+++++++||+.
T Consensus 303 ~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG 358 (386)
T PRK07855 303 LEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRG 358 (386)
T ss_pred HHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhC
Confidence 4432 1 11 1247774444443 7876 89999999999987
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=174.03 Aligned_cols=291 Identities=19% Similarity=0.212 Sum_probs=187.1
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
|.+|.|+++|...|.- ...+++++.+......+. .+ .++ ....+ ...-.....|+.+|
T Consensus 1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~~---~gi-----------~~r~~-----~~~~~~~~~la~~A 59 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--TR---TGI-----------KERRI-----AAPDETTSDLATEA 59 (319)
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--hh---cCe-----------EEEEe-----CCCCCCHHHHHHHH
Confidence 4678999999999998 577777765421100000 00 000 00000 00112357899999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~ 178 (433)
+++||+++|++++++| .++++++... ......+..++..+|+.+ +.+
T Consensus 60 ~~~al~~agl~~~~id-------~vi~~~~~~~-------------------------~~~~~~~~~i~~~lG~~~~~~~ 107 (319)
T PRK09352 60 AKKALEAAGIDPEDID-------LIIVATTTPD-------------------------YAFPSTACLVQARLGAKNAAAF 107 (319)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCchHHHHHHHHhCCCCCcEe
Confidence 9999999999998777 7888875311 111234678999999987 889
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
+++++|+|++.||..|+++|++|++|.+||+++|.+.... . ++....++++||||+|
T Consensus 108 ~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~----------------------~-~~~~~~~~~~gDGaaA 164 (319)
T PRK09352 108 DLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV----------------------D-WTDRSTCVLFGDGAGA 164 (319)
T ss_pred eccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc----------------------C-cccCCceEEEeccceE
Confidence 9999999999999999999999999999999999832110 0 1122346789999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCCCC---CCC-------------CCCh--------HHHHHHHHHHHHHcCCC
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TEP-------------HPDG--------VGVILCIEKALAHSGVS 314 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~---~~~-------------~~~~--------~~~~~ai~~al~~agl~ 314 (433)
+||++.... . +.++...+++... ..| ...+ ..+.++++++|+++|++
T Consensus 165 ~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~ 235 (319)
T PRK09352 165 VVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLT 235 (319)
T ss_pred EEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999975431 1 1222222221110 000 0011 13456899999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
++||+|+..|..+.. -...+.+.++-... .+......+||+.+|+-++.|..++ +.|.+
T Consensus 236 ~~di~~~~~h~~~~~-----~~~~~~~~lg~~~~-~~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~------------ 294 (319)
T PRK09352 236 PEDIDWLVPHQANLR-----IIDATAKKLGLPME-KVVVTVDKYGNTSAASIPLALDEAV---RDGRI------------ 294 (319)
T ss_pred HHHCCEEEECCCCHH-----HHHHHHHHhCCCHH-HhhhhHHhhCCHHHHHHHHHHHHHH---HcCCC------------
Confidence 999999999965443 23334444443211 1233445789999988777775543 33221
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+..+..+||.|-+-.+++|+
T Consensus 295 -------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 -------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12356677889988887777775
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-19 Score=176.69 Aligned_cols=250 Identities=19% Similarity=0.219 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHhCCCC--cccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 93 MLYLLTAGKKALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~--~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..|+.+|+++||+|||++ +++|| +++++..... . .+.....++..
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID-------~v~v~~~~~~-------------------------~-~~~~~~~la~~ 74 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID-------SVAVVNQLSW-------------------------R-YRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC-------EEEEeccccc-------------------------c-ccCHHHHHHHH
Confidence 568899999999999999 88888 7887754210 0 11224678899
Q ss_pred hCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh-------------------------------
Q 013946 171 LGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI------------------------------- 218 (433)
Q Consensus 171 lgl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~------------------------------- 218 (433)
+|++. +......+++++..+|..|+.+|++|++|+|||+|+|.+.+..
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99964 4445667888999999999999999999999999998642110
Q ss_pred ------h------hHHHHHhhhhhcC----------------------CCCCCC--------------------CCcccc
Q 013946 219 ------G------LGGFVACRALSQR----------------------NNDPTK--------------------ASRPWD 244 (433)
Q Consensus 219 ------~------~~~~~~~~~ls~~----------------------~~~~~~--------------------~~~pfd 244 (433)
. +..+.....+.++ ..+|.. .+.||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 0 0000000000000 001211 122333
Q ss_pred CCCCCcccccceeEEEecchHHHHhcCC--eEEEEEEEeeeccCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccE
Q 013946 245 INRDGFVMGEGAGVLLLEELEHAKKRGA--KIYAEFRGGSFTSDAYHMTE-PHP-DGVGVILCIEKALAHSGVSREDVNY 320 (433)
Q Consensus 245 ~~~~G~~~geGaaalvL~~~~~A~~~g~--~i~a~i~g~~~~~d~~~~~~-~~~-~~~~~~~ai~~al~~agl~~~dId~ 320 (433)
.--+.....||++++||.+++.|++.+. .....|.|++..++...... ++. .......+.++||++||++++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 3222234789999999999999988762 22467899888877543321 111 2334567999999999999999999
Q ss_pred EEeccCCCCCCCHHHHHHHHHH-HcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 321 INAHATSTPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 321 v~~h~~gt~~~D~~E~~al~~~-~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
+++|.+.+. .|...++.+ |... .++.++..-...||+.+++|+.++++++.+|+.
T Consensus 315 ~elydcF~~----~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg 372 (498)
T PRK08257 315 FDLYSCFPS----AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRA 372 (498)
T ss_pred EEeccCCHH----HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhh
Confidence 999999886 666666655 4433 244455555556999999999999999999986
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=170.93 Aligned_cols=238 Identities=15% Similarity=0.106 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .+++++..+. ...+..+..++..+
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId-------~li~~s~~~~-------------------------~~~p~~a~~v~~~L 110 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE-------LLACGTSQPD-------------------------QLMPGHASMVHGEL 110 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCCC-------------------------cCChHHHHHHHhhC
Confidence 578999999999999999999888 7888875421 11123356788899
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHH-hhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVA-CRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~-~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|++. +++.|+.+|+|++.||..|.++|++|.++.+||+++|.+........+.. .+.+.. .+...++||+.+..|
T Consensus 111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 187 (378)
T PRK06816 111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE---LEENPEIAFEKDFLR 187 (378)
T ss_pred CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc---CcccCCCCCCCCCCC
Confidence 9876 88899999999999999999999999999999999998554433322321 233322 123457899999999
Q ss_pred cccccceeEEEecchHHHHhcCCeE--EEEEEE-eeec------------cCCCCCC----CC-----------CCChHH
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKI--YAEFRG-GSFT------------SDAYHMT----EP-----------HPDGVG 299 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i--~a~i~g-~~~~------------~d~~~~~----~~-----------~~~~~~ 299 (433)
+++||||+|+||++.+.. .|... .....+ .... .++.... .+ ..++..
T Consensus 188 ~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
T PRK06816 188 WMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL 265 (378)
T ss_pred EeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH
Confidence 999999999999865431 12211 100000 0000 0000000 00 001111
Q ss_pred --------HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHH-----cCC-CCcccccchhhhhhHhhhH
Q 013946 300 --------VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF-----GQN-RGLRVNSTKSMIGHLLGAA 365 (433)
Q Consensus 300 --------~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~-----~~~-~~~~v~s~k~~~Gh~~~as 365 (433)
....++++|+++|++++|||++..|.......+ .+.+.+ +-. .++ ...-..+||+.+||
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~~~k~--~~~~~~~GNt~sAs 338 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIPEEKW--FTNLATVGNTGSAS 338 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCChhhe--EEeccccccccchH
Confidence 256788999999999999999999976554333 333333 211 122 22334789999998
Q ss_pred HHHHHHHH
Q 013946 366 GAVEAIAV 373 (433)
Q Consensus 366 G~~~l~~~ 373 (433)
-.+.|..+
T Consensus 339 ipi~L~~a 346 (378)
T PRK06816 339 IYIMLDEL 346 (378)
T ss_pred HHHHHHHH
Confidence 77666544
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-18 Score=166.81 Aligned_cols=315 Identities=17% Similarity=0.182 Sum_probs=192.9
Q ss_pred CCCCEEEEecceecCcC-CCHHHHHHHHHcCC--CCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGV--SGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
+.+.+.|+|+|...|.- .+.+++.+.+.+.. ..+.+ ..+ ... .| .....+.. .-.....|+
T Consensus 2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~-~~i-----~~~-~G----i~~R~~~~-----~~~~~~~la 65 (338)
T PRK09258 2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP-GQL-----EAL-TG----IRERRWWP-----EGTQLSDGA 65 (338)
T ss_pred cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh-hHh-----hhh-cC----ceeEecCC-----CCCCHHHHH
Confidence 34678999999999998 46666665443211 11100 000 000 00 00000000 111246799
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG- 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G- 175 (433)
.+|+++||+++|+++++|| .|++++... ....+..+..++..+|++.
T Consensus 66 ~~Aa~~aL~~ag~~~~~Id-------~li~~s~~~-------------------------~~~~p~~a~~v~~~lgl~~~ 113 (338)
T PRK09258 66 IAAGRKALAEAGIDPSDIG-------LLINTSVCR-------------------------DYLEPATACRVHHNLGLPKS 113 (338)
T ss_pred HHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CCCCChHHHHHHHHcCCCCC
Confidence 9999999999999998887 788877531 1222346788999999963
Q ss_pred -CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 176 -PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 176 -p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
+.+.|.++|+|++.||..|..+|++|.++.+||+++|...... -..+. .... +.....+|+.....+++||
T Consensus 114 ~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~--~~~~-----~~~~~~~~~~~~~~~~~GD 185 (338)
T PRK09258 114 CANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIV-EATID--RLLA-----PETTREDFAQSFATLTLGS 185 (338)
T ss_pred CceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhc-cchhh--hhcc-----CccchhhhhhccceEEecc
Confidence 7899999999999999999999999999999999999742211 11111 0001 1112246777677889999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCC-------CCCCCh--------HHHHHHHHHHHHHcCCCCCCcc
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT-------EPHPDG--------VGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~-------~~~~~~--------~~~~~ai~~al~~agl~~~dId 319 (433)
||+|+||++.+.. ..+. .+.+.....++.+.. ....++ .....+++++|+++|++++|||
T Consensus 186 GA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did 260 (338)
T PRK09258 186 GAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVD 260 (338)
T ss_pred cceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9999999975421 1122 234333322222111 011121 2234588899999999999999
Q ss_pred EEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc
Q 013946 320 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 398 (433)
Q Consensus 320 ~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 398 (433)
++..|..+.+.. +.+.+.++-. .++.. .. ..+||+.+++=.+.|..++ +.|.+
T Consensus 261 ~~i~H~~~~~~~-----~~~~~~lgl~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~---------------- 314 (338)
T PRK09258 261 RVICHQVGAAHT-----RAILKALGIDPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFL---------------- 314 (338)
T ss_pred EEecCCCCHHHH-----HHHHHHhCCCHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCC----------------
Confidence 999997766533 3455555432 12222 22 4689999987666665542 33221
Q ss_pred cccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 399 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+...++++
T Consensus 315 ---------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 ---------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred ---------CCCCEEEEEEechhHhhHhHeee
Confidence 12356777888887665555553
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=164.96 Aligned_cols=289 Identities=19% Similarity=0.221 Sum_probs=184.7
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.+.|.++|...|.- .+.+++.+.+......+. ...++. .. .....-.....|+.+|++
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~-----~~~gi~-----------~r-----~~~~~~~~~~~la~~A~~ 60 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVDTSDEWIV-----TRTGIK-----------ER-----RIAADDETSSTMGFEAAK 60 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcCCchHHee-----cccCce-----------EE-----EECCCCCCHHHHHHHHHH
Confidence 47899999999997 577777765431100000 000000 00 000111234779999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Cccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~v 180 (433)
+||+++|+++++|| .+++++.... ......+.+++..+|+++ |.+.|
T Consensus 61 ~al~~agl~~~~Id-------~~i~~~~~~~-------------------------~~~~~~a~~l~~~lGl~~~~~~~v 108 (318)
T TIGR00747 61 RAIENAGISKDDID-------LIIVATTTPD-------------------------HAFPSAACMVQAYLGIKGIPAFDL 108 (318)
T ss_pred HHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCChHHHHHHHHhCCCCCcEeeh
Confidence 99999999998887 7888765311 112234678999999998 89999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+.+|+|++.||..|+.+|++|.++.+||+++|...... ++. .....+++||||+|+|
T Consensus 109 ~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~----------------------~~~-~~~~~~~~GDGAaA~l 165 (318)
T TIGR00747 109 SAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL----------------------DWT-DRGTCVLFGDGAGAVV 165 (318)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC----------------------CcC-CCCeEEEEecceeEEE
Confidence 99999999999999999999999999999999732110 111 1223567999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCC---CCCC-------CCC--------------hHHHHHHHHHHHHHcCCCCC
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYH---MTEP-------HPD--------------GVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~~-------~~~--------------~~~~~~ai~~al~~agl~~~ 316 (433)
|++.+... . |..+....++.. ...| ... .....++++++|+++|++++
T Consensus 166 L~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 237 (318)
T TIGR00747 166 LGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPE 237 (318)
T ss_pred EeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 98754321 1 222222222110 0000 000 12245678999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||+|+..|..+.+ -...+.+.++-.. ++. ..-..+||+.+|+-.+.|..++ +++.+
T Consensus 238 di~~~~~h~~~~~-----~~~~~~~~lgi~~~k~~--~~~~~~Gn~~sas~~~~L~~~~---~~~~~------------- 294 (318)
T TIGR00747 238 DIDWFVPHQANLR-----IIEALAKRLELDMSQVV--KTVHKYGNTSAASIPLALDELL---RTGRI------------- 294 (318)
T ss_pred HCCEEEECCCCHH-----HHHHHHHHcCCCHHHee--ehHhhhCCHHHHHHHHHHHHHH---HcCCC-------------
Confidence 9999999977654 2333445554331 222 2234589999998777665543 33222
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++.-++|.|.+..+++|+
T Consensus 295 ------------~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 295 ------------KPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred ------------CCCCEEEEEEEehhheeeEEEEE
Confidence 01356677788988888888775
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.9e-18 Score=163.37 Aligned_cols=294 Identities=17% Similarity=0.197 Sum_probs=184.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..+.|.|+|...|.- .+.+++.+.+. .+ -..+ ++..+... +.....-.....|+.+|+
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~--~~-~~~i--~~~~Gi~~----------------r~~~~~~~~~~~la~~A~ 61 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFID--TS-DEWI--VQRTGIKE----------------RRIAHVEEYTSDLAIKAA 61 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcC--CC-HHHh--hhccCceE----------------EEECCCCCCHHHHHHHHH
Confidence 358899999999998 57777665321 10 0000 00000000 000001123578999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~ 179 (433)
++||+++|+++++|| .+++++...+ ......+.+++..+|++. +.+.
T Consensus 62 ~~al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~a~~l~~~lg~~~~~~~~ 109 (325)
T PRK12879 62 ERALARAGLDAEDID-------LIIVATTTPD-------------------------YLFPSTASQVQARLGIPNAAAFD 109 (325)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCChHHHHHHHHhCCCCCcEEE
Confidence 999999999998887 7888765311 112345678999999974 8889
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++.+|+|++.||..|.++|++|.++.+||+++|.+... + .++.....+++||||+|+
T Consensus 110 v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------~------------~~~~~~~~~~~GDgAaA~ 166 (325)
T PRK12879 110 INAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------T------------DYTDRTTCILFGDGAGAV 166 (325)
T ss_pred ECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C------------CccccCceEEEeecceEE
Confidence 99999999999999999999999999999999973211 0 011123457899999999
Q ss_pred EecchHHHHhcCCeEEEEE-------------EEeeeccCC---CCCCCCCCCh--------HHHHHHHHHHHHHcCCCC
Q 013946 260 LLEELEHAKKRGAKIYAEF-------------RGGSFTSDA---YHMTEPHPDG--------VGVILCIEKALAHSGVSR 315 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i-------------~g~~~~~d~---~~~~~~~~~~--------~~~~~ai~~al~~agl~~ 315 (433)
||++.+.. ..+.... .+.+...+. ........++ ..+..+++++|+++|+++
T Consensus 167 ll~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~ 242 (325)
T PRK12879 167 VLEATENE----PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK 242 (325)
T ss_pred EEEecCCC----CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99975431 1111111 111100000 0000001111 123468899999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||++..|..+.+ -.+.+.+.++-. .++.. ....+||+.+|+-.+.|..+ ++.+.+
T Consensus 243 ~did~~~~h~~~~~-----~~~~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~------------ 300 (325)
T PRK12879 243 DDIDWVIPHQANLR-----IIESLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKI------------ 300 (325)
T ss_pred HHCCEEEECCCCHH-----HHHHHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCC------------
Confidence 99999999965433 344566666543 12222 45788999988877666544 333322
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.++++..+||.|-+-.+++++
T Consensus 301 -------------~~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 301 -------------KPGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred -------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12346677889988887777775
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.6e-18 Score=163.20 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=170.0
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 102 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~~ 102 (433)
+.|+|+|...|.- .+.+++.+.+ +.. ...+ ++..++ ....+ ...-.....|+.+|+++
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~-~~~~--~~~~Gi-----------~~r~~-----~~~~~~~~~la~~A~~~ 60 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTS-DEWI--RTRTGI-----------RERRI-----ADPGETTSDLAVEAAKK 60 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHc--CCC-HHHh--hhccCc-----------eEEee-----CCCCCCHHHHHHHHHHH
Confidence 6799999999987 5777776654 211 0000 000000 00000 01112357899999999
Q ss_pred HHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcceec
Q 013946 103 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYSIS 181 (433)
Q Consensus 103 Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~v~ 181 (433)
||+++|+++++|| .+++++.... ......+.+++..+|++ .+++.|+
T Consensus 61 al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~~~~l~~~lg~~~~~~~~v~ 108 (320)
T cd00830 61 ALEDAGIDADDID-------LIIVATSTPD-------------------------YLFPATACLVQARLGAKNAAAFDIN 108 (320)
T ss_pred HHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCcEeecc
Confidence 9999999998887 7888765311 11233567899999994 5888999
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEEe
Q 013946 182 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 261 (433)
Q Consensus 182 ~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalvL 261 (433)
.+|+|++.||..|.++|++|.++.+||+++|.+.... -|+....++++||||+|+||
T Consensus 109 ~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------------~~~~~~~~~~~GDgAaA~ll 165 (320)
T cd00830 109 AACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL-----------------------DWTDRSTAVLFGDGAGAVVL 165 (320)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------------------CcccCCceEEEeccceEEEE
Confidence 9999999999999999999999999999999732110 03344567899999999999
Q ss_pred cchHHHHhcCCeEEEEEEEeeeccCCCC-----CCC-----C-----------CCCh--------HHHHHHHHHHHHHcC
Q 013946 262 EELEHAKKRGAKIYAEFRGGSFTSDAYH-----MTE-----P-----------HPDG--------VGVILCIEKALAHSG 312 (433)
Q Consensus 262 ~~~~~A~~~g~~i~a~i~g~~~~~d~~~-----~~~-----~-----------~~~~--------~~~~~ai~~al~~ag 312 (433)
++.+. +.. |.++...+++.. ... | ...+ ....++++++|+++|
T Consensus 166 ~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g 237 (320)
T cd00830 166 EATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAG 237 (320)
T ss_pred EecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcC
Confidence 97543 122 233222222210 000 0 0001 234578999999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
++++|||++..|..+... .+.+.+.++-... .+......+||+.+|+-.+.|..++
T Consensus 238 ~~~~di~~~~~h~~~~~~-----~~~~~~~lgl~~~-~~~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 238 LTPDDIDWFVPHQANLRI-----IEAVAKRLGLPEE-KVVVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred CCHHHCCEEEECCCCHHH-----HHHHHHHhCCCHH-HhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 999999999999776653 2334555553211 1223455789999998777776553
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-19 Score=161.12 Aligned_cols=246 Identities=22% Similarity=0.274 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+-.|.+.||+++.+++++.+ -||+|.-. +......++.+.+.--
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~-------eVi~GnVl-------------------------~AnlGQapaRQaalgA 77 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVA-------EVIFGNVL-------------------------SANLGQAPARQAALGA 77 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhh-------hhhhcccc-------------------------ccccCcchHHHHHhhc
Confidence 467888899999999999887554 45666421 1122334566777777
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhH------------------------HHHH
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG------------------------GFVA 225 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~------------------------~~~~ 225 (433)
||. -+++||+--|+||+.|+.+|++.|+.|..|.+++||.|++.....+. .|++
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~ 157 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDK 157 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhcc
Confidence 774 48999999999999999999999999999999999999875433110 0000
Q ss_pred h--h-----------------------------------hhhcC----------CC---CCCC-C-----------Cccc
Q 013946 226 C--R-----------------------------------ALSQR----------NN---DPTK-A-----------SRPW 243 (433)
Q Consensus 226 ~--~-----------------------------------~ls~~----------~~---~~~~-~-----------~~pf 243 (433)
. | .+... +. +.++ . .+|.
T Consensus 158 ~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~v 237 (396)
T KOG1390|consen 158 CHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPV 237 (396)
T ss_pred CCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccce
Confidence 0 0 00000 00 0000 0 1111
Q ss_pred cCCCCC-------cccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 244 DINRDG-------FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 244 d~~~~G-------~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
-....| -.+.|||+|+||.+.+.+.+.|.+++++|++|+..... |..-..+-..++.++|+++|+..+
T Consensus 238 F~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~-----P~df~iaP~laipk~lk~aG~~~s 312 (396)
T KOG1390|consen 238 FKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATE-----PIDFTIAPALAIPKALKKAGLEQS 312 (396)
T ss_pred eecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccC-----hhhcccchHHHHHHHHHHcCcchh
Confidence 111122 23679999999999999999999999999999865322 111122345789999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
||||+|.+-... .-..|..+.++-. ..+++....-.+||++|+||+.-++..+..|+.
T Consensus 313 dVd~~EiNEAFs-----~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 313 DVDYWEINEAFS-----VVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhHHhhhhhhh-----HHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 999999752211 0112222333322 356677777789999999999999999999976
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.5e-17 Score=159.21 Aligned_cols=291 Identities=19% Similarity=0.215 Sum_probs=181.9
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
...+.|+|+|...|.- .+.+++.+.+......+ ....++.. ..+.. .-.....|+.+|
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i-----~~~tGi~~-----------R~~~~-----~~~~~~~La~~A 103 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWI-----ATRTGIRN-----------RRVLS-----GDETLTSLAVEA 103 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcCCchhhe-----ecccCcce-----------EeecC-----CCCCHHHHHHHH
Confidence 3578999999999998 46666655331100000 00001100 00000 112357899999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~ 178 (433)
+++||+++|+++++|| .++++++.+.. .. ..+..++..+|+++ +++
T Consensus 104 a~~aL~~agi~~~dId-------~li~~s~~~~~-------------------------~~-~~a~~v~~~LG~~~~~~~ 150 (379)
T PLN02326 104 AKKALEMAGVDPEDVD-------LVLLCTSSPDD-------------------------LF-GSAPQVQAALGCTNALAF 150 (379)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEeCCCCc-------------------------cC-cHHHHHHHHhCCCCCcee
Confidence 9999999999998887 77777653110 11 13567999999976 788
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
.|+.+|+|++.||..|.++|++|.++.+||+++|.+... . .|++..+.+++||||+|
T Consensus 151 dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~----------------------~-~~~d~~~~~lfGDGAaA 207 (379)
T PLN02326 151 DLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRY----------------------V-DWTDRGTCILFGDGAGA 207 (379)
T ss_pred eccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCC----------------------C-CccccCceEEEcceeEE
Confidence 999999999999999999999999999999999973100 0 12233456789999999
Q ss_pred EEecchHHHHhcCCeEEEEEEEeeeccCCC-----------------------CCCC---------CCCChH--------
Q 013946 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAY-----------------------HMTE---------PHPDGV-------- 298 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g~~~~~d~~-----------------------~~~~---------~~~~~~-------- 298 (433)
+||++.+... ..+. ++...+++. .... ....+.
T Consensus 208 vlL~~~~~~~---~~i~----~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~ 280 (379)
T PLN02326 208 VVLQACDDDE---DGLL----GFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVR 280 (379)
T ss_pred EEEEEcCCCC---CceE----EEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHH
Confidence 9999753221 1111 111111100 0000 001111
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
.+.++++++|+++|++++|||++..|..+... .+.+.+.++-.. +++ .. -..+||+.+|+=.+.|..++
T Consensus 281 ~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~ek~~-~~-l~~~GNt~sAsi~~~L~~~~--- 350 (379)
T PLN02326 281 CVPQVIESALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGIPPEKVI-SN-LANYGNTSAASIPLALDEAV--- 350 (379)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHee-ec-HhhcCcHHHHHHHHHHHHHH---
Confidence 13357889999999999999999999665442 334555555331 222 22 35789999888666655442
Q ss_pred HcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 378 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 378 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+.+ .+.+.++..+||.|-+-.+++++
T Consensus 351 ~~g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 351 RSGKV-------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HcCCC-------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 33221 12356777889988777777764
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=5e-19 Score=155.10 Aligned_cols=249 Identities=22% Similarity=0.341 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
++-+|...||+|+++.-++++ ..-+|-++|-+.. ..+.-+.+|++
T Consensus 32 ~a~ea~tkal~da~ikys~vq---qa~vgyvfgdstc--------------------------------gqraiyevgmt 76 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYSEVQ---QAVVGYVFGDSTC--------------------------------GQRAIYEVGMT 76 (408)
T ss_pred HHHHHHHHHHHhcCCCHHHHH---hhhheeeecCCcc--------------------------------chHHHHhcccc
Confidence 566889999999999877444 3455666665432 22333568999
Q ss_pred C-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc------------------------------hhhhHHH
Q 013946 175 G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI------------------------------PIGLGGF 223 (433)
Q Consensus 175 G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~------------------------------~~~~~~~ 223 (433)
| |.+.|++.|++|..||.+|.+.|++|..|++|+.|.|.+.. |+....|
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 9 99999999999999999999999999999999999986421 1110001
Q ss_pred --HHhhhhhcCCCCC------------CCCCccccCCCC---------------------CcccccceeEEEecchHHHH
Q 013946 224 --VACRALSQRNNDP------------TKASRPWDINRD---------------------GFVMGEGAGVLLLEELEHAK 268 (433)
Q Consensus 224 --~~~~~ls~~~~~~------------~~~~~pfd~~~~---------------------G~~~geGaaalvL~~~~~A~ 268 (433)
.....+.+++..| ...-.|+++-++ ++..+||+++.+|.++...+
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~ 236 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVR 236 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHH
Confidence 0001111111101 111234433322 33468999999999988777
Q ss_pred hcCCeEE-EEEEEeeeccCCCCCCCC----CC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH
Q 013946 269 KRGAKIY-AEFRGGSFTSDAYHMTEP----HP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC 342 (433)
Q Consensus 269 ~~g~~i~-a~i~g~~~~~d~~~~~~~----~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~ 342 (433)
+.+..-. .+|.|.-+..|..+.... .. ..+....+.++.+++.|++|.||+.||+|++..+ ++.+-.+||.-.
T Consensus 237 k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglc 315 (408)
T KOG1406|consen 237 KHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLC 315 (408)
T ss_pred hcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCC
Confidence 7664332 346666655554322111 00 1134567889999999999999999999999885 666666776422
Q ss_pred Hc----------CC---CCcccccchhh--hhhHhhhHHHHHHHHHHHHHHc
Q 013946 343 FG----------QN---RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 343 ~~----------~~---~~~~v~s~k~~--~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
-. +. .+.-++-..+. -||++||.|+++.++.+.+||.
T Consensus 316 pegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 316 PEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred CCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence 10 00 11223333333 3999999999999999999986
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-16 Score=152.96 Aligned_cols=287 Identities=17% Similarity=0.205 Sum_probs=178.5
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.+.|+|+|...|.- .+.+++.+.+......+. ...++..+ .+.. .-.....|+.+|++
T Consensus 2 ~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~-----~~~gi~~r-----------~~~~-----~~~~~~~la~~A~~ 60 (326)
T CHL00203 2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWIS-----TRTGIKKR-----------HLAP-----SSTSLTKLAAEAAN 60 (326)
T ss_pred ccEEEEEEEECCCeEEcHHHHHHhcCCChhhEe-----eccCeEEE-----------EeCC-----CCCCHHHHHHHHHH
Confidence 46899999999998 466666654321000010 00010000 0000 11234779999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Cccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~v 180 (433)
+||+++|+++++|| .|+++++.... ... .+..++..+|+++ +++.|
T Consensus 61 ~aL~~ag~~~~dId-------~vi~~s~~~~~-------------------------~~~-~~~~v~~~Lg~~~~~~~~v 107 (326)
T CHL00203 61 KALDKAHMDPLEID-------LIILATSTPDD-------------------------LFG-SASQLQAEIGATRAVAFDI 107 (326)
T ss_pred HHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCc-hHHHHHHHhCCCCCceeee
Confidence 99999999999888 78888643110 011 2456888999976 78899
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+.+|+|++.||..|.++|++|+++.+||+++|.+. .. .+++.....+++||||+|+|
T Consensus 108 ~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s-~~----------------------~~~~~~~~~~~fgDga~A~l 164 (326)
T CHL00203 108 TAACSGFILALVTATQFIQNGSYKNILVVGADTLS-KW----------------------IDWSDRKTCILFGDGAGAAI 164 (326)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhh-Cc----------------------CCcccCCceEEEcceeeEEE
Confidence 99999999999999999999999999999999731 10 01122235678999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCC----------------C--CCCC-------CChH--------HHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYH----------------M--TEPH-------PDGV--------GVILCIEKA 307 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~----------------~--~~~~-------~~~~--------~~~~ai~~a 307 (433)
|++.+. ..+ .++....++.. . ..+. +.+. ....+++++
T Consensus 165 l~~~~~-----~~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 235 (326)
T CHL00203 165 IGASYE-----NSI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKC 235 (326)
T ss_pred EEEcCC-----CCe----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHH
Confidence 986432 111 11111111100 0 0000 1111 234579999
Q ss_pred HHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
|+++|++++|||++..|..+.. =.+++.+.++-. .++ ...-..+||+.+|+=.+.|..+ ++.|.+
T Consensus 236 L~~~g~~~~did~~~~hq~~~~-----~~~~~~~~lgl~~~k~--~~~l~~~Gn~~sasi~~~L~~~---~~~g~~---- 301 (326)
T CHL00203 236 LNALNISIDEVDWFILHQANKR-----ILEAIANRLSVPNSKM--ITNLEKYGNTSAASIPLALDEA---IQNNKI---- 301 (326)
T ss_pred HHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCHHHh--hhHHHhhCcHHHHHHHHHHHHH---HHhCCC----
Confidence 9999999999999999966644 344455555533 122 2234578999888766555444 344332
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|=+-.+++++
T Consensus 302 ---------------------~~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 302 ---------------------QPGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ---------------------CCCCEEEEEEEchhhhheEEEEE
Confidence 11356667788877666666654
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-16 Score=152.29 Aligned_cols=289 Identities=17% Similarity=0.196 Sum_probs=177.7
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCC-CCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-DCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
+.|.|+|+|...|.- .+.+++.+.. |.+ . +.+ ...++. . ++..........|+.+|
T Consensus 3 ~~v~I~~~~~~lP~~~v~~~~l~~~~--g~~---~-~~~~~~~Gi~-----------~-----r~~~~~~~~~~~la~~A 60 (339)
T PRK06840 3 MNVGIVGTGVYLPKDVMTAEEIAEKT--GIP---E-EVVIEKFGIY-----------E-----KPVPGPEDHTSDMAIAA 60 (339)
T ss_pred CceEEEEEEEeCCCcccCHHHHHHHh--CCC---H-HHHhhhcCcc-----------e-----EeeCCCCCCHHHHHHHH
Confidence 478999999999998 4666654432 110 0 000 000100 0 00111123357899999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~ 178 (433)
+++||+++|+++++|| .+++.++.. +.......+.+++..+|++. +++
T Consensus 61 a~~aL~~ag~~~~dId-------~li~~~~~~------------------------~~~~~p~~a~~l~~~lGl~~~~~~ 109 (339)
T PRK06840 61 AKPALKQAGVDPAAID-------VVIYIGSEH------------------------KDYPVWSSAPKIQHEIGAKNAWAF 109 (339)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEeccCC------------------------CCCCCCchHHHHHHHhCCCCcccc
Confidence 9999999999998887 666544321 11112234678999999975 788
Q ss_pred eecccchHHHHHHHHHHHHHHc-CCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc--ccccc
Q 013946 179 SISTACATSNFCILNAANHIIR-GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF--VMGEG 255 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~-G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~--~~geG 255 (433)
.|..+|++++.||..|.++|++ |.++.+||++.|..... + . |+.....+ .+|||
T Consensus 110 ~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~-----------~-----------~-~~~~~~~~~~~~GDg 166 (339)
T PRK06840 110 DIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDL-----------V-----------D-YDNPRTRFMFNFAAG 166 (339)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccc-----------c-----------C-cCCCCeeeeccCCCc
Confidence 8999999999999999999999 99999999998862110 0 0 11112232 36999
Q ss_pred eeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-------------CCCC-------------CCC----------hHH
Q 013946 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-------------MTEP-------------HPD----------GVG 299 (433)
Q Consensus 256 aaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-------------~~~~-------------~~~----------~~~ 299 (433)
|+|+||++.+. +.. |.+.....++.. ...+ .+. ...
T Consensus 167 AaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (339)
T PRK06840 167 GSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPN 238 (339)
T ss_pred eeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHH
Confidence 99999986432 122 222222111100 0000 000 012
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
..++++++|+++|++++|||++..|-.+.. =.+.+.+.++-.. +.. ....+||+.+++-.+.|... ++
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~~~~~-----~~~~~~~~Lgl~~~~~~---~~~~~Gn~~sas~~~~L~~~---~~ 307 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILHMKRS-----AHIALLEGLGLTEEQAI---YLDEYGHLGQLDQILSLHLA---LE 307 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCcCHH-----HHHHHHHHcCCCHHHeE---eHHhccchhhhhHHHHHHHH---HH
Confidence 457899999999999999999988754432 2344555555331 222 24578999988766666543 23
Q ss_pred cCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 379 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 379 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+ .+.+.++..+||.|.+..+++++
T Consensus 308 ~~~~-------------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 308 QGKL-------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred cCCC-------------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 3221 12356777899998888888775
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-15 Score=147.46 Aligned_cols=295 Identities=16% Similarity=0.169 Sum_probs=177.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..+.|+|+|...|.- .+.+++.+.+ |.. +.+-.... | +....+.. .-.....|+..|+
T Consensus 2 ~~~~I~~~g~~lP~~~v~~~~~~~~~--~~~-----~~~i~~~~-----G----i~~r~~~~-----~~e~~~~la~~Aa 60 (326)
T PRK05963 2 CSSRIAGFGHAVPDRRVENAEIEAQL--GLE-----TGWIERRT-----G----IRCRRWAA-----PDETLSDLAASAG 60 (326)
T ss_pred CccEEEEEEEECCCCeecHHHHHHHc--CCC-----HHHhhhcc-----C----CeEEEEcC-----CCCCHHHHHHHHH
Confidence 357899999999998 4666665542 110 00000000 0 00000011 1123478999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Ccce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~ 179 (433)
++||+++|+++++|| .|+++++.. ....+..+.+|+..||++. +++.
T Consensus 61 ~~aL~~ag~~~~~Id-------~li~~t~~~-------------------------d~~~p~~a~~v~~~Lg~~~~~~~d 108 (326)
T PRK05963 61 DMALSDAGIERSDIA-------LTLLATSTP-------------------------DHLLPPSAPLLAHRLGLQNSGAID 108 (326)
T ss_pred HHHHHHcCCCHHHCC-------EEEEECCCC-------------------------CCCCCcHHHHHHHHhCCCCCceee
Confidence 999999999999888 788887541 1223445778999999965 7889
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|..+|++++.||..|..+|++|. +.+||+++|... . .+ .| +....++++||||+|+
T Consensus 109 i~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s-~----------~~-----------~~-~~~~~~~lfGDgA~A~ 164 (326)
T PRK05963 109 LAGACAGFLYALVLADGFVRAQG-KPVLVVAANILS-R----------RI-----------NM-AERASAVLFADAAGAV 164 (326)
T ss_pred ccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhh-c----------cC-----------Cc-cccCceEEEeecceEE
Confidence 99999999999999999999985 899999998621 0 01 11 1123578899999999
Q ss_pred EecchHHHHhcCCeEEE-EEEEeeeccC-------CCC-C----------CCCCCCh--------HHHHHHHHHHHHHcC
Q 013946 260 LLEELEHAKKRGAKIYA-EFRGGSFTSD-------AYH-M----------TEPHPDG--------VGVILCIEKALAHSG 312 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a-~i~g~~~~~d-------~~~-~----------~~~~~~~--------~~~~~ai~~al~~ag 312 (433)
||++.+.. ...+.. .+...+...+ +.. . .....++ ..+.++++++|+++|
T Consensus 165 ll~~~~~~---~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 241 (326)
T PRK05963 165 VLAPSAKA---NSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAA 241 (326)
T ss_pred EEEecCCC---CCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99864321 111111 1111000000 000 0 0000011 223467889999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCC
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 392 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 392 (433)
++++|||++..|-.+.. -.+.+.+.++-.... +...-..+||+.+|+=.+.|-. .++.+.+
T Consensus 242 l~~~did~~~~h~~~~~-----~~~~~~~~l~l~~~k-~~~~l~~~Gn~~sas~~~~L~~---~~~~~~~---------- 302 (326)
T PRK05963 242 MTPQDIDRFFPHQANAR-----IVDKVCETIGIPRAK-AASTLETYGNSSAATIPLSLSL---ANLEQPL---------- 302 (326)
T ss_pred CCHHHCCEEEeCCCCHH-----HHHHHHHHcCCCHHH-hhhhHHhhCcHHHHHHHHHHHH---HHHhCCC----------
Confidence 99999999999965543 333444444432111 1123357899977765554432 2233221
Q ss_pred CCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 393 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+-.++|++
T Consensus 303 ---------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 303 ---------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred ---------------CCCCEEEEEEEehhhhheeeEEe
Confidence 12356777899988887777775
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=148.99 Aligned_cols=260 Identities=18% Similarity=0.170 Sum_probs=164.0
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.|.|+++|...|.- .+.+++.+.+. ...+.. ..+...+ .+ ...-.....|+.+|++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~--~~~~~~-----~~gi~~r-----------~~-----~~~~~~~~~l~~~a~~ 57 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLG--VDPGKY-----TTGIGQR-----------HM-----AGDDEDVPTMAVEAAR 57 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhC--CCccee-----eeeccee-----------Ee-----cCCCCCHHHHHHHHHH
Confidence 36799999999987 57777765431 110000 0000000 00 0001234779999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~v 180 (433)
+||+++|+++++|| .|++++..... .....+..++..+|+. .++++|
T Consensus 58 ~aL~~ag~~~~~Id-------~li~~~~~~~~-------------------------~~~~~~~~i~~~lg~~~~~~~~v 105 (324)
T cd00827 58 RALERAGIDPDDIG-------LLIVATESPID-------------------------KGKSAATYLAELLGLTNAEAFDL 105 (324)
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCccHHHHHHHHcCCCCCceeeh
Confidence 99999999998888 78888753210 1223567899999995 589999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+.+|+|++.||..|+++|++|.++.+||+++|.+.... ...+..++++||||+|+|
T Consensus 106 ~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~------------------------~~~~~~~~~~gdgaaA~l 161 (324)
T cd00827 106 KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL------------------------DEGSALEPTLGDGAAAML 161 (324)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc------------------------cCCCCccccccCceEEEE
Confidence 99999999999999999999999999999999732111 123457899999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCC---------CCC-------------CCC--------ChHHHHHHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYH---------MTE-------------PHP--------DGVGVILCIEKALAH 310 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~---------~~~-------------~~~--------~~~~~~~ai~~al~~ 310 (433)
|++.+... +.. |.......++.. ... .+. .......+++++|++
T Consensus 162 l~~~~~~~--~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (324)
T cd00827 162 VSRNPGIL--AAG----IVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDR 235 (324)
T ss_pred EecCcccc--cCC----ceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHH
Confidence 99765320 111 222111111110 000 010 013456788999999
Q ss_pred cCCCCCCccEEEeccCCC-CCCCHHHHHHHHHHHcCC-CCcccc--cchhhhhhHhhhHHHHHHHHH
Q 013946 311 SGVSREDVNYINAHATST-PAGDIKEYQALIHCFGQN-RGLRVN--STKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 311 agl~~~dId~v~~h~~gt-~~~D~~E~~al~~~~~~~-~~~~v~--s~k~~~Gh~~~asG~~~l~~~ 373 (433)
.|++ +||+++..|..+. ..- +.+.+.++-. .++... ..-..+||+.+|+-.+.|..+
T Consensus 236 ~~~~-~~i~~~~~h~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 236 AGLS-EDIDYFVPHQPNGKKIL-----EAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred cccc-cccceeeccCchHHHHH-----HHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 9999 9999999996665 322 2222333211 112211 245667999888766555544
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.2e-15 Score=145.91 Aligned_cols=238 Identities=20% Similarity=0.234 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++|+++||+++|+++++|| .+++++..+. ...+..+..++..+
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID-------~li~~s~~~~-------------------------~~~p~~a~~v~~~L 97 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG-------AVYVGSESHP-------------------------YAVKPTATIVAEAI 97 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------ccccchHHHHHHHc
Confidence 478999999999999999999888 7888765321 11122356888999
Q ss_pred CCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|++. +++.+..+|+++..||..|..+|++|.++.+||++.|.+.. +|.. ..-
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~------------------~~~~--------~~~ 151 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG------------------APGD--------ALE 151 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc------------------CCCc--------cCc
Confidence 9862 78889999999999999999999999999999999997310 0111 111
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEee-eccCCC---CC-CC--C------CC---ChHHHHHHHHHHHHHcCC
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FTSDAY---HM-TE--P------HP---DGVGVILCIEKALAHSGV 313 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~-~~~d~~---~~-~~--~------~~---~~~~~~~ai~~al~~agl 313 (433)
+..||||+|+||++.+. ...+.+.. ...++. .. .. + .. -......+++++|+++|+
T Consensus 152 ~~~GDGAaA~vl~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl 223 (345)
T TIGR00748 152 YTAGAGGAAYIIGEKNT--------VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGL 223 (345)
T ss_pred ccCCCceEEEEEccCCc--------ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCC
Confidence 45799999999986331 11222211 111111 00 00 0 00 011233778899999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 392 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 392 (433)
+++|||++..|..+.. -.+.+.+.++-.. .++.+-.-..+||+.+||=.+.|...+. . +
T Consensus 224 ~~~did~~i~Hq~~~~-----~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~---~--~---------- 283 (345)
T TIGR00748 224 TPEDFDYAVFHQPNGK-----FYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD---I--A---------- 283 (345)
T ss_pred CHHHcCEEEeCCCChH-----HHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH---h--c----------
Confidence 9999999999965543 2333455554321 1221111256899998887766655432 1 1
Q ss_pred CCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 393 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+ +-+.++..+||.|-+..+++++
T Consensus 284 -------------~--~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 284 -------------E--PGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred -------------C--CCCEEEEEEecCCcceeEEEEE
Confidence 0 1235677788888777777763
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-15 Score=145.68 Aligned_cols=259 Identities=17% Similarity=0.195 Sum_probs=161.3
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.|.|+|+|...|.- .+.+++.+.+-.....+. +..+... ..+.. .-.....|+.+|++
T Consensus 2 ~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~-----~~~Gi~~-----------R~~~~-----~~~~~~~la~~Aa~ 60 (347)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIK-----RGLGVEE-----------KSVPG-----PDEDTATIAVEAAR 60 (347)
T ss_pred ceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHh-----hccCeee-----------eecCC-----CCcCHHHHHHHHHH
Confidence 47899999999998 577777655411000000 0001000 00011 11234789999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--Ccce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~~ 179 (433)
+||+++|+++++|| .+++++..+.+ ..+..+..++..+|++. +++.
T Consensus 61 ~aL~~ag~~~~dId-------~li~~s~~~~~-------------------------~~p~~a~~v~~~Lgl~~~~~~~d 108 (347)
T PRK04262 61 NALKRAGIDPKEIG-------AVYVGSESHPY-------------------------AVKPTATIVAEALGATPDLTAAD 108 (347)
T ss_pred HHHHHcCCCHHHCC-------EEEEEecCCCc-------------------------ccccHHHHHHHHcCCCCCceEEE
Confidence 99999999999888 78887653211 11223568889999964 6788
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++.+|++++.+|..|..+|++|.++.+||++.|.... . |... + -+..||||+|+
T Consensus 109 v~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~-----~~~~---~-----~~~~GDGA~A~ 162 (347)
T PRK04262 109 LEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------A-----PGDA---L-----EYTAAAGGAAF 162 (347)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------C-----CCCC---C-----CCcCCCCcEEE
Confidence 9999999999999999999999999999999997210 0 1110 1 13359999999
Q ss_pred EecchHHHHhcCCeEEEEEEEee-eccCCCCCC----C--C----CCC-----hHHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGS-FTSDAYHMT----E--P----HPD-----GVGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~-~~~d~~~~~----~--~----~~~-----~~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
||++.+. ..+|.+.. ...+..... . + ... ......+++++|+++|++++|||++..
T Consensus 163 ll~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~ 234 (347)
T PRK04262 163 IIGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVF 234 (347)
T ss_pred EEecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeec
Confidence 9986321 12233321 111211000 0 0 001 134567899999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHH
Q 013946 324 HATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 324 h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~ 373 (433)
|..+.... +.+.+.++-. .++..+-.-..+||+.+|+=.+.|..+
T Consensus 235 Hq~n~~~~-----~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 235 HQPNGKFP-----LRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred CCCchHHH-----HHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHH
Confidence 95555432 2333444432 122221123678999999877666554
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-16 Score=140.72 Aligned_cols=238 Identities=21% Similarity=0.341 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC-
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW- 173 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl- 173 (433)
|...+.+..+++-+++|..+. -|++|+...+. . .+..+...+.+-|+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~ig-------di~vG~vL~pg------------------------~-ga~e~R~a~~~ag~P 111 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIG-------DIVVGTVLAPG------------------------S-GASECRMAAFYAGFP 111 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhc-------ceeeeeccCCC------------------------c-chHHHHHHHHHcCCC
Confidence 445566777899999998666 56777653211 1 12222233444566
Q ss_pred -CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh--hhHH--------HHH-------hhhhh-----
Q 013946 174 -MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI--GLGG--------FVA-------CRALS----- 230 (433)
Q Consensus 174 -~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~--~~~~--------~~~-------~~~ls----- 230 (433)
+-|..+|+.-|+||++|+..-+..|++|.+|.-|.+|+|++.+.. .+.+ +.. +|..+
T Consensus 112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~ 191 (435)
T KOG1389|consen 112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAE 191 (435)
T ss_pred cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHH
Confidence 348889999999999999999999999999999999999876431 1110 000 00000
Q ss_pred -------------------------------------cCCCCCCCCCcc------------------------ccCC---
Q 013946 231 -------------------------------------QRNNDPTKASRP------------------------WDIN--- 246 (433)
Q Consensus 231 -------------------------------------~~~~~~~~~~~p------------------------fd~~--- 246 (433)
..-.+|.+.-+| |.++
T Consensus 192 rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGtt 271 (435)
T KOG1389|consen 192 RFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTT 271 (435)
T ss_pred HhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCcc
Confidence 000122222222 2221
Q ss_pred --CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 013946 247 --RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 247 --~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h 324 (433)
.+.--.+||+++++|.+...|.+.|.+++++.+.+.... ..|..-+.+-..+|.++|+.+|+..+|||++|.+
T Consensus 272 TagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEIN 346 (435)
T KOG1389|consen 272 TAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN 346 (435)
T ss_pred ccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeehh
Confidence 111236899999999999999999999999999887652 2233344556789999999999999999999974
Q ss_pred cCCCCCCCHHHHHHHHHHHcCC------CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 325 ATSTPAGDIKEYQALIHCFGQN------RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~------~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
|+.|-+.++.-+ .++++....-.+||++||+|+..++..+.-||+
T Consensus 347 ----------EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 347 ----------EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred ----------HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence 555544444321 245566666678999999999999999999987
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-14 Score=140.57 Aligned_cols=214 Identities=14% Similarity=0.092 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+..|+++||+++|+++++|| .+|+++.. +....+..+..++..
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t-------------------------~d~~~P~~a~~v~~~ 106 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKNSLD-------ALIVVTQS-------------------------PDFFMPSTACYLHQL 106 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCC-------------------------CCCCCCcHHHHHHHH
Confidence 3578999999999999999999888 78888764 233456678999999
Q ss_pred hCCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 171 LGWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 171 lgl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
||++. +++.|+.+|++++.+|..|..+|++|..+ +||+++|... . .+ . ++....
T Consensus 107 Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S-~----------~~-----------~-~~d~~~ 162 (353)
T PRK12880 107 LNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS-K----------FI-----------H-PKNMNL 162 (353)
T ss_pred hCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhh-c----------cC-----------C-cccCCc
Confidence 99963 67899999999999999999999999999 8888888621 1 01 1 111223
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccC------C------CCCC----C-----------CCCChH---
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD------A------YHMT----E-----------PHPDGV--- 298 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d------~------~~~~----~-----------~~~~~~--- 298 (433)
..++||||+|+||++.+.. .+ + ..+...+...+ + .+.. . ...++.
T Consensus 163 ~~lFGDGAaA~vl~~~~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 237 (353)
T PRK12880 163 APIFGDGVSATLIEKTDFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIF 237 (353)
T ss_pred eeeecccceEEEEEecCCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHH
Confidence 5689999999999864321 11 1 11111111000 0 0000 0 001122
Q ss_pred -----HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHH
Q 013946 299 -----GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAI 371 (433)
Q Consensus 299 -----~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~ 371 (433)
....+++++|+++|++++|||++..|.. ...-.+.+.+.++-.. +++ ...-..+|++.+||=.+.|-
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~-----~~~i~~~i~~~Lgl~~ek~~-~~~l~~~GNtssasip~~L~ 310 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS-----NAYLVDCIKEELKLNDDKVP-NFIMEKYANLSACSLPALLC 310 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCHHHhh-hhhHHhhCCHHHHHHHHHHH
Confidence 1246889999999999999999999944 4455666776665432 221 12224568887666444443
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-14 Score=137.61 Aligned_cols=261 Identities=14% Similarity=0.107 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
-...|+.+|+++||+++|+++++|| .+++.++.+. . .+..+.+++..
T Consensus 101 ~a~~La~~Aa~~aL~~ag~~~~dId-------~ii~~t~t~~-------------------------~-~P~~a~~l~~~ 147 (393)
T PLN03172 101 EVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV-------------------------D-MPGADYQLTKL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC-------------------------c-CchHHHHHHHH
Confidence 3458999999999999999998887 7777776421 1 23468899999
Q ss_pred hCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++.- .+.+..+|++++.+|..|.++++++....+||+++|.+...+ . . ++. +-.+.--
T Consensus 148 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~--~--------~-----~~d--~~~~~~v 210 (393)
T PLN03172 148 LGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF--R--------G-----PSD--THLDSLV 210 (393)
T ss_pred hCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh--c--------c-----ccc--ccHHhhh
Confidence 999863 356789999999999999999999999999999999732100 0 0 000 0000012
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeee----ccCCC----------C--CCC--CCCChHHHHHHHHHHHH
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF----TSDAY----------H--MTE--PHPDGVGVILCIEKALA 309 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~----~~d~~----------~--~~~--~~~~~~~~~~ai~~al~ 309 (433)
...++||||+|+||+..+... .. ++.-+|.++.. .+++. + ... |..-...+...+++.|+
T Consensus 211 ~~~LFGDGAaAvVl~~~~~~~-~~-~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~ 288 (393)
T PLN03172 211 GQALFGDGAAAVIIGADPDTK-IE-RPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFA 288 (393)
T ss_pred ccchhcCceEEEEEecCCCCc-cc-CceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhh
Confidence 357899999999998643211 01 12223444321 11111 0 000 00111345567888999
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHHHHHHHH-HHcCCcCCCC
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQA-IRTGWIHPNI 386 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~-l~~~~ipp~~ 386 (433)
+.|++..||+++..|--|- .-++++.+.++-.. .+.. ..+-..+|++.+|+=++-|-+.... ++.+.+
T Consensus 289 ~~gl~~~di~~~~~Hqgg~-----~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~---- 359 (393)
T PLN03172 289 PIGINDWNSIFWIAHPGGP-----AILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKG---- 359 (393)
T ss_pred hcCCCccccceEEecCCcH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCC----
Confidence 9999999999999995444 45566666665431 1111 1234456888776544333332110 111111
Q ss_pred CCCCCCCCCCCccccCCccccc-CccEEEEecccccceeeeeEEcc
Q 013946 387 NLENPDAVVDTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
++. ..+.++..+||-|=+...++|+.
T Consensus 360 -------------------~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 360 -------------------STGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred -------------------CCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 111 12567888999887777788775
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.1e-14 Score=140.53 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=159.7
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
.....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+..|+.
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id-------~li~~s~~~--------------------------~~~P~~a~~i~~ 129 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDID-------HLVVNTSTG--------------------------NPTPSLDAMLIN 129 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECCCC--------------------------CCCCCHHHHHHH
Confidence 34578999999999999999998887 788877531 123445778999
Q ss_pred HhCCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCC
Q 013946 170 DLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246 (433)
Q Consensus 170 ~lgl~G--p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 246 (433)
.+|++. +++.|. .+|++++.||..|..+|++|..+.+||+++|..... + . ++. ..+..
T Consensus 130 ~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~--~---------~-----~~d---~~~~~ 190 (361)
T cd00831 130 RLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLW--Y---------R-----GPD---HRSML 190 (361)
T ss_pred HhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccce--e---------C-----CCC---cHHHh
Confidence 999973 678898 899999999999999999999999999999973210 0 0 000 00000
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeec--------------cCCCCCCC----CCCChHHHHHHHHHHH
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--------------SDAYHMTE----PHPDGVGVILCIEKAL 308 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~--------------~d~~~~~~----~~~~~~~~~~ai~~al 308 (433)
-..+++||||+|+||++.+..... ......+.+.... ..+.+... +.--......+++++|
T Consensus 191 ~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L 269 (361)
T cd00831 191 VGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLL 269 (361)
T ss_pred hhhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHh
Confidence 135779999999999975432100 0111222222111 00000000 0000124556899999
Q ss_pred HHc--CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCC
Q 013946 309 AHS--GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHP 384 (433)
Q Consensus 309 ~~a--gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp 384 (433)
+++ |++++|||++..|-.+... .+.+.+.++-.. ++.. ...-..+||+.+|+=.+.|..+ ++++.+
T Consensus 270 ~~~~~g~~~~did~~~~H~~~~~i-----~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~---~~~g~~-- 339 (361)
T cd00831 270 ARLGIGLFKLAFDHWCVHPGGRAV-----LDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM---EAKGRV-- 339 (361)
T ss_pred ccccCCCccccceEEEECCCChHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH---HHhCCC--
Confidence 999 9999999999999765542 344555555321 1211 1334567999888765555544 333222
Q ss_pred CCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeE
Q 013946 385 NINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428 (433)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~v 428 (433)
.+.+.++..+||.|-+..+++
T Consensus 340 -----------------------~~Gd~vll~~~G~G~s~~~~l 360 (361)
T cd00831 340 -----------------------KRGDRGLLIAFGPGFTCESAV 360 (361)
T ss_pred -----------------------CCCCEEEEEEEcCCceeeeee
Confidence 123466777888876655554
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-13 Score=134.95 Aligned_cols=224 Identities=15% Similarity=0.097 Sum_probs=136.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
+....|+.+|+++||+++|+++++|| .|+++++.+ .. .+..+..++.
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~-~P~~a~~v~~ 152 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG-------------------------AH-IPGVDFRLVP 152 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CC-CCchHHHHHH
Confidence 34567999999999999999999888 788887642 11 2345778999
Q ss_pred HhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCC
Q 013946 170 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246 (433)
Q Consensus 170 ~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 246 (433)
.||++.. .+.+..+|++++.+|..|..+|++|....|||+++|....-. . +.... .++..
T Consensus 153 ~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~-----~~d~~-~~~~~ 215 (399)
T PLN03171 153 LLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------N-----GPDEG-CFQTL 215 (399)
T ss_pred HhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------C-----CCCcc-cHHhh
Confidence 9999753 456677999999999999999999999999999999831110 0 00000 01111
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC--------------CCCC-CCChHHHHHHHHHHHHH-
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH--------------MTEP-HPDGVGVILCIEKALAH- 310 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~--------------~~~~-~~~~~~~~~ai~~al~~- 310 (433)
-.+.++||||+|+||++.+...++ .+.++.......++.. .... ..-...+.+.+++++++
T Consensus 216 v~~~LFGDGAaA~vl~~~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~ 292 (399)
T PLN03171 216 LNQGLFGDGAAAVIVGADADAAER---PLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDA 292 (399)
T ss_pred hccccccCccEEEEEecCCCCCCC---CceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHH
Confidence 136789999999999974422111 1223333222111110 0000 00112333444666654
Q ss_pred --------cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHH
Q 013946 311 --------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIA 372 (433)
Q Consensus 311 --------agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~ 372 (433)
+|++++||+++ .|--+- .-.+.+.+.++-.. +++.+ .+-..+|++.+|+=.+.|-.
T Consensus 293 l~~~~~~~~g~~~~di~~~-~Hq~~~-----~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~ 358 (399)
T PLN03171 293 FAPLLGGDGGAEWNDLFWA-VHPGSS-----AILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDE 358 (399)
T ss_pred HHhhcccccCCCcccceEE-EcCCcH-----HHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHH
Confidence 58899999988 694443 44555666665321 22211 23345788887664444443
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=126.57 Aligned_cols=245 Identities=25% Similarity=0.407 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
+..|...|++.||+.+++.++.+| -||+|+-.... .-.-.++.++....
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-------~VI~GNV~aSS------------------------sDgIYl~RHvGL~~ 76 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-------HVIMGNVLASS------------------------SDGIYLARHVGLRV 76 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-------eEEEeeeeecc------------------------CCceEeeecccccc
Confidence 355778889999999999998666 66776532100 00001122233333
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchh---------------------hhHH----HH
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI---------------------GLGG----FV 224 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~---------------------~~~~----~~ 224 (433)
|+ .-|..+|+.-|-|+.++|-.+++.|.-|+++.+|+||+|.+.... .|.. +.
T Consensus 77 GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~ 156 (396)
T KOG1391|consen 77 GVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYV 156 (396)
T ss_pred CCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhh
Confidence 33 237899999999999999999999999999999999999653210 0000 00
Q ss_pred H-----------------------hhhhhcC-----------CC----------------CCCCCCcc------------
Q 013946 225 A-----------------------CRALSQR-----------NN----------------DPTKASRP------------ 242 (433)
Q Consensus 225 ~-----------------------~~~ls~~-----------~~----------------~~~~~~~p------------ 242 (433)
+ ....++. ++ .-+...||
T Consensus 157 kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 157 KLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCc
Confidence 0 0000000 00 00111222
Q ss_pred -ccCCCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 013946 243 -WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVS 314 (433)
Q Consensus 243 -fd~~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~ 314 (433)
|. .||.+ .+|||+++++.+++..++.+.+++++|.++....- .|...+.+..-+|+.+|+.+|++
T Consensus 237 vFk--KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGc-----dP~IMGIGPvPAI~~vLKksGlk 309 (396)
T KOG1391|consen 237 VFK--KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGC-----DPSIMGIGPVPAISGVLKKSGLK 309 (396)
T ss_pred hhc--cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeecc-----ChhhccccCcHHHHHHHHHcCCc
Confidence 22 23333 57999999999999999999999999999886532 12222334456899999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
.+|||.||.+-...+ ...|..+.++-. .+++++...-.+||++|+||.......+.-|++
T Consensus 310 l~DiDl~EvNEAFAp-----Q~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~R 370 (396)
T KOG1391|consen 310 LKDIDLVEVNEAFAP-----QYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRR 370 (396)
T ss_pred ccccceEEechhhch-----HHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHH
Confidence 999999998755443 345555665533 357788888889999999999999998888876
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-13 Score=134.17 Aligned_cols=223 Identities=13% Similarity=0.090 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .||++++. ....+..+..++..
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~~dId-------~lI~~t~t--------------------------~~~~P~~a~~l~~~ 151 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPVSDIT-------HLVYVSSS--------------------------EARLPGGDLYLAKQ 151 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECcC--------------------------CCCCCcHHHHHHHH
Confidence 3567999999999999999998887 77777752 11234457789999
Q ss_pred hCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++.. .+.+..+|++++.||..|..+|++|..+.|||+++|.....+ . . +. ..+ ++...
T Consensus 152 LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~--~--------~-----~~-~~~-~~d~~ 214 (391)
T PLN03169 152 LGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF--R--------P-----PS-PDR-PYDLV 214 (391)
T ss_pred hCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc--c--------C-----CC-ccc-hhhhh
Confidence 999752 477899999999999999999999999999999999731100 0 0 00 011 12223
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeee--ccCCC-CC-------------CC--CCCChHHHHHHHHHHHH
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--TSDAY-HM-------------TE--PHPDGVGVILCIEKALA 309 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~--~~d~~-~~-------------~~--~~~~~~~~~~ai~~al~ 309 (433)
...++||||+|+||+..+.... ...++ .+...+. ..+.. .+ .. +..-...+..+++++|+
T Consensus 215 ~~~lFGDGAaA~vl~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~ 292 (391)
T PLN03169 215 GAALFGDGAAAVIIGADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMK 292 (391)
T ss_pred hhhhccCceEEEEEecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999986432200 11111 2222111 00000 00 00 00011234567899999
Q ss_pred HcCCCCCCcc--EEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHH
Q 013946 310 HSGVSREDVN--YINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEA 370 (433)
Q Consensus 310 ~agl~~~dId--~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l 370 (433)
++|++++||| ++..|-.+. .-.+++.+.++-.. ++.. ...-..+||+.+|+=.+.|
T Consensus 293 ~~gl~~~did~~~~v~Hq~n~-----~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L 352 (391)
T PLN03169 293 KAGLVEKDYNDLFWAVHPGGP-----AILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVL 352 (391)
T ss_pred HcCCCCCCCCcceEEecCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHH
Confidence 9999999999 888995543 44555666555321 1211 1233457888777644333
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-13 Score=134.28 Aligned_cols=331 Identities=14% Similarity=0.149 Sum_probs=188.2
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCC-----CCcee-CCC-CCCCCCCcccccc----ccCC-CCCCCCChhhhhc
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGV-----SGISE-IET-FDCTSFPTKIAAE----IKSF-STDGWVAPKLSKR 88 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~-----~~~~~-~~~-~~~~~~~~~~~~~----i~~~-~~~~~i~~~~~~~ 88 (433)
.+..|.|+|...|.- ...+++.+.+.+-- ...+. +.+ ++..+...+.... +.++ +...+..|....+
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 98 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDAR 98 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHH
Confidence 457899999999987 45555555554311 11111 100 1222222222111 1111 0011111222233
Q ss_pred CC----HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHH
Q 013946 89 MD----KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS 164 (433)
Q Consensus 89 ~~----~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 164 (433)
++ -...|+.+|+++||+++|+++++|| .+++.++.+. ..+..+
T Consensus 99 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg~--------------------------~~Ps~a 145 (401)
T PLN03170 99 QDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-------HLVFCTTSGV--------------------------DMPGAD 145 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC--------------------------CCChHH
Confidence 33 3446999999999999999998887 7777775420 134568
Q ss_pred HHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCc
Q 013946 165 AMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 241 (433)
Q Consensus 165 ~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 241 (433)
.+|+..||++.- .+.+..+|++++.+|..|.++++++....|||+++|....- + . +++. .+
T Consensus 146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~--~---------~----~~~~-~~ 209 (401)
T PLN03170 146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVT--F---------R----GPSE-SH 209 (401)
T ss_pred HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhc--c---------C----Cccc-ch
Confidence 899999999763 57899999999999999999999999999999999973210 0 0 0100 00
Q ss_pred cccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeec----c----------CCCCCC--C--CCCChHHHHHH
Q 013946 242 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT----S----------DAYHMT--E--PHPDGVGVILC 303 (433)
Q Consensus 242 pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~----~----------d~~~~~--~--~~~~~~~~~~a 303 (433)
++..-...++||||+|+||+..+... ......++...... . .|.... . |..-...+...
T Consensus 210 -~~~~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 286 (401)
T PLN03170 210 -LDSMVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERS 286 (401)
T ss_pred -hhhhhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHH
Confidence 11122346899999999998643210 01111233332211 0 110000 0 00112345568
Q ss_pred HHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccc-cccchhhhhhHhhhHHHHHHHHHHHH-HHcC
Q 013946 304 IEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLR-VNSTKSMIGHLLGAAGAVEAIAVVQA-IRTG 380 (433)
Q Consensus 304 i~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~-l~~~ 380 (433)
++++|+++|++++||+++.+|--+. .-.+++.+.++-.. ++. ....-..+||+.+++=++.|-+.... ++.|
T Consensus 287 v~~~L~~~gl~~~di~~~v~Hqgg~-----~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g 361 (401)
T PLN03170 287 LEEAFKPLGITDYNSIFWVAHPGGP-----AILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG 361 (401)
T ss_pred HHHHHHhcCCCccccCeEEecCCcH-----HHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcC
Confidence 8999999999999999999995543 44556666665321 111 11234567888877655544443211 1222
Q ss_pred CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 381 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 381 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+ ....+.++..+||-|=+..+++|+.
T Consensus 362 ~~~~----------------------G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 362 QATT----------------------GEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred CCCC----------------------CCCccEEEEEEeCchHhHHhHHhee
Confidence 2210 0012456777888776666666654
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.2e-14 Score=129.33 Aligned_cols=176 Identities=22% Similarity=0.189 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||++||+++++|| .+|+|+.. + ....+..++..+
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-------~IIvGdl~--------------------------~--Q~~~As~vA~~L 94 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-------FFLAGDLL--------------------------N--QIITANFVARDL 94 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeCCC--------------------------C--cccHHHHHHHHh
Confidence 467999999999999999999888 77877521 0 112467888999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccc--cCCCCC
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW--DINRDG 249 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pf--d~~~~G 249 (433)
|+ |.+.|+++|+|++.||..|..+|++|.+|.+||++.+.+.+..... +. | ..| .+....
T Consensus 95 GI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~-------p----~eyg~q~~~ta 156 (327)
T TIGR02845 95 GI--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RY-------P----TEYGVQKPPTA 156 (327)
T ss_pred CC--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cc-------c----cccccCCCCee
Confidence 87 8899999999999999999999999999999999998743221110 00 1 012 223466
Q ss_pred cccccceeEEEecchHHHHhcCCeE----EEEEEEeeeccCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKI----YAEFRGGSFTSDAYHMT-EPHPDGVGVILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i----~a~i~g~~~~~d~~~~~-~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h 324 (433)
..+++||+|+||++.+ .+.+| .++|..++.. |..++. .+. ++....|.+-|++.|.+|+|-|.|.+-
T Consensus 157 ~~tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~-d~~nmgaama---paa~dti~~h~~d~~~~~~~yd~i~tg 228 (327)
T TIGR02845 157 QWTVTGAGAVLLASTG----GGPRITSATIGKVVDYGIT-DPLDMGAAMA---PAAADTIEAHFKDTGRSVDDYDLIVTG 228 (327)
T ss_pred eEEEcccEEEEEeecC----CCCceEEEEEEEEEecCCC-Ccccchhhhh---HHHHHHHHHHHHHcCCChhhccEEEec
Confidence 7899999999998753 22222 2455555554 333332 122 255678999999999999999999975
Q ss_pred cCCC
Q 013946 325 ATST 328 (433)
Q Consensus 325 ~~gt 328 (433)
+.|.
T Consensus 229 dlg~ 232 (327)
T TIGR02845 229 DLAR 232 (327)
T ss_pred chHH
Confidence 5443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-12 Score=127.78 Aligned_cols=223 Identities=14% Similarity=0.138 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
-...|+.+|+++||+++|+++++|| .||++|+++ ...+..+.+++..
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg--------------------------~~~Ps~a~~l~~~ 146 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDIT-------HIVFATTSG--------------------------VNMPGADHALAKL 146 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC--------------------------CCCccHHHHHHHH
Confidence 4457999999999999999999888 788888652 1134468899999
Q ss_pred hCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++.- ++.++.+|++++.+|..|..+|++|....|||+++|.+.. .+ . .++. ...+..-
T Consensus 147 LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~--~~---------~----~~~~--~~~~~~~ 209 (389)
T PLN03168 147 LGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV--TY---------R----APSE--NHLDGLV 209 (389)
T ss_pred hCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh--hc---------c----Cccc--ccHHHHh
Confidence 999762 6889999999999999999999999999999999997321 00 0 0000 0011112
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeee--c--cCCC---CC-------C--C--CCCChHHHHHHHHHHHH
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--T--SDAY---HM-------T--E--PHPDGVGVILCIEKALA 309 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~--~--~d~~---~~-------~--~--~~~~~~~~~~ai~~al~ 309 (433)
...++||||+|+||+..+... ....++ .+..... . +++. .. . . |..-...+...++++++
T Consensus 210 ~~~LFGDGAaAvvl~~~~~~~-~~~~~~-~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~ 287 (389)
T PLN03168 210 GSALFGDGAGVYVVGSDPKPE-VEKALF-EVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARK 287 (389)
T ss_pred ccccccCccEEEEEecCCCCc-cCCcce-EEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999643211 011222 2222111 0 1111 00 0 0 00011234566777888
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHH
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEA 370 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l 370 (433)
..|+...|++++..|--|. .=++++.+.++-.. .+.. ..+-..+|++-+||=.+-|
T Consensus 288 ~~~~~~~d~~~~v~Hqgg~-----~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL 345 (389)
T PLN03168 288 CVGSPDWNEMFWAVHPGGP-----AILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVL 345 (389)
T ss_pred hcCCCccccceEEecCCcH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHH
Confidence 8888888889999995444 45566666665321 1211 1234556888777644443
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.2e-13 Score=129.30 Aligned_cols=224 Identities=15% Similarity=0.098 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++.++.+. . .+..+.+++..|
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~~-------------------------~-~P~~a~~l~~~L 148 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV-------------------------D-MPGADYQLTKLL 148 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC-------------------------c-ccHHHHHHHHHh
Confidence 447999999999999999998887 7777776421 1 235688899999
Q ss_pred CCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 172 GWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 172 gl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
|++.. .+.+..+|++++.+|..|.++++++....|||+++|.+...+ .. ++. +..+..-.
T Consensus 149 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-----~~d--~~~~~~v~ 211 (391)
T PLN03173 149 GLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RG-----PSD--THLDSLVG 211 (391)
T ss_pred CCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CC-----ccc--cchhhhhh
Confidence 99863 456799999999999999999999999999999999732100 00 000 00011123
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeee----ccC----------CCC--CCC--CCCChHHHHHHHHHHHHH
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF----TSD----------AYH--MTE--PHPDGVGVILCIEKALAH 310 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~----~~d----------~~~--~~~--~~~~~~~~~~ai~~al~~ 310 (433)
..++||||+|+||+..+.. ... .+..++.++.. .++ |.+ ... |..-...+...+++.|++
T Consensus 212 ~~LFGDGAaAvvl~~~~~~-~~~-~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~ 289 (391)
T PLN03173 212 QALFGDGAAAIIIGSDPVL-GVE-KPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKP 289 (391)
T ss_pred hhhhcCceEEEEEeCCCCC-CcC-CcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHh
Confidence 5779999999999863321 001 11113333221 111 110 000 111123456788999999
Q ss_pred cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHHHH
Q 013946 311 SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIA 372 (433)
Q Consensus 311 agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l~~ 372 (433)
.|++++||+++..|--|. .-++++.+.++-.. ++.. ..+-..+|++.+||=.+-|-+
T Consensus 290 ~gl~~~di~~~v~Hqgg~-----~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 290 LGISDWNSLFWIAHPGGP-----AILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred cCCCccccCeEEECCCcH-----HHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 999999999999995554 45566666665331 1211 123455688877764444444
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-11 Score=122.43 Aligned_cols=118 Identities=12% Similarity=0.115 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
.......++.++|+++|++|++|| -+|+.++ + ....+..+.+|...+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID-------~LIv~cS-~-------------------------~~p~PSlAa~I~n~L 234 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIG-------ILIVNCS-L-------------------------FNPTPSLSAMIVNHY 234 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECC-C-------------------------CCCCCCHHHHHHHHh
Confidence 345667788999999999998887 6666432 1 123456788999999
Q ss_pred CCC-C-Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 172 GWM-G-PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 172 gl~-G-p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
|++ . .++.++ .||++++.+|..|.++|+.+....+||+++|... . .+ .+-++...
T Consensus 235 Glr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~-~~--------------------y~g~Drs~ 292 (521)
T PLN02854 235 KLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-L-NW--------------------YFGNDRSM 292 (521)
T ss_pred CCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-c-CC--------------------CCCCchhh
Confidence 998 4 578888 7999999999999999999999999999999842 1 00 00011122
Q ss_pred ---CcccccceeEEEecch
Q 013946 249 ---GFVMGEGAGVLLLEEL 264 (433)
Q Consensus 249 ---G~~~geGaaalvL~~~ 264 (433)
.+++||||+|+||++.
T Consensus 293 lv~~~LFgDGAAAvlLs~~ 311 (521)
T PLN02854 293 LLCNCIFRMGGAAVLLSNK 311 (521)
T ss_pred hcceeeeccceeEEEEecc
Confidence 4688999999999864
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.4e-12 Score=122.79 Aligned_cols=209 Identities=18% Similarity=0.188 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+++|+++||+++ ++++|+ .+++++..+. ......+..+...||
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id-------~li~~t~s~~-------------------------~~~~s~a~~v~~~Lg 95 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID-------MVIFGTESGI-------------------------DQSKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHhC
Confidence 679999999999998 677777 7888876421 112346788999999
Q ss_pred CCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 173 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 173 l~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
+++ +++.+.++|++++.||..|..+|++|..+.+||+++|..... .....-.
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~--------------------------~~~~~~~ 149 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG--------------------------LESPGEP 149 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc--------------------------cCCCCCc
Confidence 974 788899999999999999999999999999999999862100 0011224
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEE-Ee-eeccCCCCCC------CCCCChH--------HHHHHHHHHHHHcCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFR-GG-SFTSDAYHMT------EPHPDGV--------GVILCIEKALAHSGVS 314 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~-g~-~~~~d~~~~~------~~~~~~~--------~~~~ai~~al~~agl~ 314 (433)
+.||||+|+||++.. .+. .+. +. ..+.+..... .+..++. .+..++++.|++.|++
T Consensus 150 ~~GdGA~A~Ll~~~~-------~i~-~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~ 221 (379)
T TIGR01835 150 TQGAGAVAMLVSADP-------KLL-AINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLS 221 (379)
T ss_pred cccCccEEEEEecCC-------Cee-EEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 589999999998531 222 121 11 1111111110 1111222 3457888999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-C----cc-----cccchhhhhhHhhhHHHHHHHHH
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-G----LR-----VNSTKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~----~~-----v~s~k~~~Gh~~~asG~~~l~~~ 373 (433)
++|||++..|...+++. .+++.+++.... + +. -.-.-..+||+.+||=.+.|..+
T Consensus 222 ~~did~~i~H~p~~~~~----~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 222 LADFAAFCFHVPFTKMG----LKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred HHHcCEEEECCCCCcHH----HHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence 99999999998766532 233333322110 0 00 00123468999988866666554
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-13 Score=133.72 Aligned_cols=57 Identities=30% Similarity=0.412 Sum_probs=50.9
Q ss_pred chHHHHHHHHhCCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcch
Q 013946 161 NMGSAMLAMDLGWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 217 (433)
Q Consensus 161 ~~~a~~ia~~lgl~G--p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~ 217 (433)
...+..++...|+.. |.++|+.+|+||+.|+..|++.|++|.+|++|++|+|.+...
T Consensus 67 ~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred ccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCC
Confidence 345678899999985 999999999999999999999999999999999999976543
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-11 Score=120.55 Aligned_cols=224 Identities=19% Similarity=0.206 Sum_probs=136.9
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
++|.|.|+|..+|.. .+.+++.+.+ |.+ +.|-..+...+. +. +.. .-.....|++.|+
T Consensus 3 ~~vgI~gig~Y~P~~~v~n~eLa~~~--g~~-----~~~~~~GI~~r~------~a---va~-----~~Ed~~tmA~~AA 61 (459)
T PLN02577 3 KNVGILAMEVYFPPTCVQQEALEAHD--GVS-----KGKYTIGLGQDC------MA---FCT-----DVEDVISMSLTVV 61 (459)
T ss_pred CccEEEEEEEeCCCeEEcHHHHHHHh--CCC-----HHHHhhccceeE------ec---cCC-----CCCCHHHHHHHHH
Confidence 468999999999987 5777765542 211 000000110000 00 000 1122467999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH---HHhCCCC-C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA---MDLGWMG-P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~lgl~G-p 176 (433)
++||+++|+++++|| -|+++|.++. ......+..|. ..+|.+. .
T Consensus 62 ~~aL~~agid~~~Id-------llivaTeT~~-------------------------d~~ps~A~~v~~ll~~LG~~~~~ 109 (459)
T PLN02577 62 KSLLEKYNIDPKQIG-------RLEVGSETVI-------------------------DKSKSIKTFLMQLFEESGNTDIE 109 (459)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCchHHHHHHHHHHhCCCCcE
Confidence 999999999999888 8899987531 11233455554 4566654 7
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCC--CEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.+..+|.++..||..|..+|++|.. +.+||+++|..... +. ..+ ...|+
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~------------------~~-~~e--------~t~Gd 162 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYA------------------EG-PAR--------PTGGA 162 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhcc------------------CC-CCC--------CCCCc
Confidence 888999999999999999999999985 99999999972110 00 001 12399
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-------CCCChH--------HHHHHHHHHHHHc------CC
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------PHPDGV--------GVILCIEKALAHS------GV 313 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~al~~a------gl 313 (433)
||+|+||+..+ .. .+-....|.... +...... +..++. .+..++++.+++. |+
T Consensus 163 GA~A~lv~~~~----~~-~l~~~~~g~~~~-~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~ 236 (459)
T PLN02577 163 GAVAMLVGPNA----PI-VFESKYRGSHMA-HVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQF 236 (459)
T ss_pred ceEEEEEccCC----Cc-eeecccccccCc-ccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 99999998532 10 110111122211 1111111 222332 2344555565555 88
Q ss_pred CCCCccEEEeccCCCCCC
Q 013946 314 SREDVNYINAHATSTPAG 331 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~ 331 (433)
+++|+||+..|-..+.+.
T Consensus 237 ~~~d~d~~vfHqP~~km~ 254 (459)
T PLN02577 237 SISDADYFVFHAPYNKLV 254 (459)
T ss_pred CHHHcCEEEecCCccchh
Confidence 999999999999877744
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=118.35 Aligned_cols=178 Identities=20% Similarity=0.178 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||++||+++++|| .+|+|...+ ....+..++..+
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-------~lI~Gdll~----------------------------Q~~sAs~vA~~L 100 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-------YLLAGDLLN----------------------------QIISANFAAREL 100 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC----------------------------CcchHHHHHHHh
Confidence 467999999999999999999888 788875310 012466778888
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
|+ |.+.|+++|+++..||..|+.+|++|.+|.+||++.+.+.+...-..| -. .-+..||. ....
T Consensus 101 GI--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~-----P~-----eyg~qrp~----taqw 164 (337)
T PRK08304 101 GI--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRF-----PT-----EYGGQRPP----TAQW 164 (337)
T ss_pred CC--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccC-----ch-----hccccCCC----cceE
Confidence 86 999999999999999999999999999999999999874332111000 00 01123332 3345
Q ss_pred cccceeEEEecchHHHHhcCCeE----EEEEEEeeeccCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKI----YAEFRGGSFTSDAYHMT-EPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i----~a~i~g~~~~~d~~~~~-~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
.++||+|+||.+.. .+.+| .++|..++.. |..++. .+. .+....|.+-|++.|.+|+|-|.|.+-+.
T Consensus 165 tvtGAGA~i~~~~~----~~~~i~~~t~Gkv~D~g~~-d~~nmgaaMa---pAa~dti~~h~~d~~~~~~~yDli~tGDl 236 (337)
T PRK08304 165 TVTGAGAVLLSREG----SGPRITHATIGKVVDLGIK-DPNDMGAAMA---PAAADTIQQHFKDTGRSPEDYDLIVTGDL 236 (337)
T ss_pred EeeccEEEEEecCC----CCceEEEEeEEEEEecCCC-Ccccchhhhh---HHHHHHHHHHHHHcCCChhhccEEEEcch
Confidence 78899999998632 22222 2344555543 333222 122 35567899999999999999999997555
Q ss_pred CC
Q 013946 327 ST 328 (433)
Q Consensus 327 gt 328 (433)
|.
T Consensus 237 g~ 238 (337)
T PRK08304 237 GR 238 (337)
T ss_pred HH
Confidence 44
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.7e-11 Score=117.56 Aligned_cols=118 Identities=11% Similarity=0.137 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....++..|+.+||+++|++|++|| -+++ ++++ ....+..+.+|...
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID-------~LVv-~cS~-------------------------~~~~PSlaa~V~~~ 217 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIG-------ILVV-NCSL-------------------------FNPTPSLSAMIVNK 217 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEE-ECCC-------------------------CCCCCcHHHHHHHH
Confidence 3567899999999999999998887 5655 4431 12345678899999
Q ss_pred hCCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G--p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++. .++.++ .||++++.+|..|.++|+.+....+||+++|... ... . +++++
T Consensus 218 LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S-~~~---------------------~-~~d~~ 274 (502)
T PLN02377 218 YKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENIT-QNW---------------------Y-FGNKK 274 (502)
T ss_pred hCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-ccc---------------------C-CCCCc
Confidence 99984 688899 6999999999999999999999999999999832 110 0 12222
Q ss_pred C----CcccccceeEEEecch
Q 013946 248 D----GFVMGEGAGVLLLEEL 264 (433)
Q Consensus 248 ~----G~~~geGaaalvL~~~ 264 (433)
. .+++||||+|+||++.
T Consensus 275 s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 275 SMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred cccccceeeccccEEEEEecc
Confidence 2 4678999999999863
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.7e-11 Score=111.70 Aligned_cols=215 Identities=21% Similarity=0.259 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++|++++|++++++|++|+ .|++||.++... .-..+..|+..|
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig-------~v~vgTES~~d~-------------------------~K~~at~v~~~l 98 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG-------AVIVGSESGPDA-------------------------VKPTATIVAEAL 98 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc-------eEEEecCCCccc-------------------------ccchHHHHHHHh
Confidence 467999999999999999998777 899998764332 123477889999
Q ss_pred CCCCC--cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWMGP--NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~Gp--~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|+.-- ++-+..+|-++..||..|..++.+|..+.+||+|.|..... |... --
T Consensus 99 g~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~------------------~~~~--------~E 152 (377)
T COG3425 99 GLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA------------------PGDA--------LE 152 (377)
T ss_pred CCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC------------------CCcc--------cC
Confidence 99743 34478899999999999999999999999999999973211 1111 11
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeee-ccCCCCCCC----CCC--Ch--------HHHHHHHHHHHHHcCCC
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF-TSDAYHMTE----PHP--DG--------VGVILCIEKALAHSGVS 314 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~-~~d~~~~~~----~~~--~~--------~~~~~ai~~al~~agl~ 314 (433)
...|.|++|+|++.. ..+.+++.+.++ +.|-..... +.| ++ ..+..+.+..+++.|++
T Consensus 153 ~t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls 225 (377)
T COG3425 153 YTAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLS 225 (377)
T ss_pred ccCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCC
Confidence 346899999999852 344555545443 333221111 222 11 34567888889999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchh-hhhhHhhhHHHHHHHHHHH
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS-MIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~-~~Gh~~~asG~~~l~~~~~ 375 (433)
++|.||+..|-+.+. +=.++++.+.-..+.+.-+-.-+ ++|.+..+|..++|+.++-
T Consensus 226 ~~dfdy~vfH~P~~k----~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 226 PDDFDYIVFHQPNGK----FPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred hhhhCeEEecCCCCc----hHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 999999999988776 44555555533322222222223 6899999998888887654
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3e-12 Score=114.12 Aligned_cols=274 Identities=20% Similarity=0.271 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
+.|+.++....|+.-.++.+.+| -+|+|+-.-.. -.+.++...+..-|
T Consensus 67 hdlar~al~~ll~kt~lpke~~d-------yii~gtviqev-------------------------ktsniareaal~ag 114 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLD-------YIICGTVIQEV-------------------------KTSNIAREAALLAG 114 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhc-------eeeehhhHHHH-------------------------hcchHHHHHHHhcC
Confidence 34566667777888888777666 67777643111 12333444555556
Q ss_pred C--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhH---------HHHH---------------h
Q 013946 173 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG---------GFVA---------------C 226 (433)
Q Consensus 173 l--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~---------~~~~---------------~ 226 (433)
+ +-|..+|..+|-|+..|+..++.+|..|.||+++.||+|.+.+...-. .+++ .
T Consensus 115 fsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~ 194 (465)
T KOG1392|consen 115 FSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRK 194 (465)
T ss_pred CCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhh
Confidence 6 459999999999999999999999999999999999999753211100 0000 0
Q ss_pred hhhh-----------------------------cCCC-------------------------------CC----------
Q 013946 227 RALS-----------------------------QRNN-------------------------------DP---------- 236 (433)
Q Consensus 227 ~~ls-----------------------------~~~~-------------------------------~~---------- 236 (433)
..|+ +... +|
T Consensus 195 nflapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirv 274 (465)
T KOG1392|consen 195 NFLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRV 274 (465)
T ss_pred hccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCccc
Confidence 0000 0000 00
Q ss_pred ----------CCCCccccC--CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeee-ccCCCCCCCCCCChHHHHHH
Q 013946 237 ----------TKASRPWDI--NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF-TSDAYHMTEPHPDGVGVILC 303 (433)
Q Consensus 237 ----------~~~~~pfd~--~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~-~~d~~~~~~~~~~~~~~~~a 303 (433)
....+||.. .++.-.+-|||.+.++..++.|++.|-++.+.++.+-. ++|........ ....
T Consensus 275 ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllg-----pay~ 349 (465)
T KOG1392|consen 275 SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLG-----PAYV 349 (465)
T ss_pred CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecc-----cccc
Confidence 000112211 12333467999999999999999999999999998754 45544332222 2467
Q ss_pred HHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHH-HH-----cCC--------CCcccccchhhhhhHhhhHHHHH
Q 013946 304 IEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIH-CF-----GQN--------RGLRVNSTKSMIGHLLGAAGAVE 369 (433)
Q Consensus 304 i~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~-~~-----~~~--------~~~~v~s~k~~~Gh~~~asG~~~ 369 (433)
+.+.|++||++..|||.+|.|-...-.- ....+++.. .| +.. .++..+...-.+||++||.|+.-
T Consensus 350 ipkll~kagltlkdid~feiheafagqi-lanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl 428 (465)
T KOG1392|consen 350 IPKLLDKAGLTLKDIDVFEIHEAFAGQI-LANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRL 428 (465)
T ss_pred cHHHHHHcCCcccccchhhhHHHHhHHH-HhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhh
Confidence 8899999999999999999995422100 011222211 12 111 12334455556899999999987
Q ss_pred HHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 370 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 370 l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
....+--|++ ...+++++.+...||+...++++.|
T Consensus 429 ~mh~anrl~~----------------------------e~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 429 AMHSANRLKE----------------------------EKGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred HHHHHhHHHh----------------------------hcCceeEeehhhcCCcceEEEeecc
Confidence 7666665543 1246788888899999999999998
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-09 Score=108.61 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...++..|+.+||+++|++|++|| -+|+.++. ....+..+..|...+
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DID-------iLIv~~S~--------------------------~~~~PSlaa~I~n~l 222 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIG-------ILIVNCSL--------------------------FNPTPSLSAMVINHY 222 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCC--------------------------CCCCchHHHHHHHHh
Confidence 456888999999999999998887 56665431 223466788999999
Q ss_pred CCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC-
Q 013946 172 GWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR- 247 (433)
Q Consensus 172 gl~G--p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~- 247 (433)
|++. .++.++ .||++++.||..|.++|+.+....+||+++|... . .+. +..++
T Consensus 223 Glr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~-n~y---------------------~g~drs 279 (511)
T PLN02192 223 KLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-L-NWY---------------------FGNDRS 279 (511)
T ss_pred CCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-c-cCC---------------------CCCCHH
Confidence 9984 788999 6999999999999999999999999999999843 1 110 01111
Q ss_pred CC---cccccceeEEEecch
Q 013946 248 DG---FVMGEGAGVLLLEEL 264 (433)
Q Consensus 248 ~G---~~~geGaaalvL~~~ 264 (433)
.- +++||||||+||++.
T Consensus 280 ~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 280 MLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HHhccccccccceEEEEecc
Confidence 11 468999999999873
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.4e-10 Score=109.93 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....++..|+++||+++|++|++|| -+|+.++.+ ...+..+.+|...
T Consensus 147 ea~~la~~Aa~~aL~~agi~p~dId-------~lIv~tst~--------------------------~~~Pslaa~V~~~ 193 (478)
T PLN02932 147 ETEEVIIGAVDNLFRNTGISPSDIG-------ILVVNSSTF--------------------------NPTPSLSSILVNK 193 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCCcHHHHHHHH
Confidence 3567999999999999999999887 777777642 1345668899999
Q ss_pred hCCC-C-Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWM-G-PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~-G-p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++ . .++.++ .||++++.+|..|.++|+++....+||+++|... ..... .. .+ +..-
T Consensus 194 lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S-~~~~~---------------~d-~r--~~l~ 254 (478)
T PLN02932 194 FKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT-QNLYL---------------GN-NK--SMLV 254 (478)
T ss_pred hCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc-cccCC---------------Cc-ch--hhhc
Confidence 9997 3 688898 8999999999999999999999999999999832 21100 00 00 0012
Q ss_pred CCcccccceeEEEecchH
Q 013946 248 DGFVMGEGAGVLLLEELE 265 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~ 265 (433)
..+++||||+|+||+..+
T Consensus 255 t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 255 TNCLFRIGGAAILLSNRS 272 (478)
T ss_pred cceeecccceEEEEeccc
Confidence 457889999999999743
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-10 Score=106.79 Aligned_cols=178 Identities=19% Similarity=0.181 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||++||+++++|| .+|+|+..+ ....+..++..|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-------~i~vGdL~n----------------------------Q~ipssfvar~L 98 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-------FFLAGDLMN----------------------------QITPTSFAARTL 98 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC----------------------------CcCcHHHHHHHh
Confidence 457999999999999999999888 788886531 112344677888
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
|+ |.+.|.++|+++..||..|+.+|++|.+|.+||+....+.+...-..| =. .-+..||.....
T Consensus 99 GI--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~-----P~-----eyG~Qrp~taqw---- 162 (334)
T PRK12404 99 GI--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY-----PT-----EYGGQKPPTAQW---- 162 (334)
T ss_pred CC--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC-----cc-----cccCcCCCcccE----
Confidence 84 779999999999999999999999999999999988764333211111 00 113345544332
Q ss_pred cccceeEEEecchHHHHhcCCeE----EEEEEEeeeccCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKI----YAEFRGGSFTSDAYHMT-EPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i----~a~i~g~~~~~d~~~~~-~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
.--|++++||.+.. .+.+| .++|..++.. |..++. .+. .+....|.+-|++.|.+|+|-|.|.+-+.
T Consensus 163 TvTgaga~~l~~~~----~~~~i~~~T~Gkv~D~g~~-d~~nMGaaMA---PAA~dti~~h~~d~~~~~~~yDlI~TGDL 234 (334)
T PRK12404 163 TVTGAGAAILSKTG----DGPRVTSATIGRVVDMGLT-DPFNMGGAMA---PAAVDTIEAHLRDRQIDASYYDLIVTGDL 234 (334)
T ss_pred EEEceEEEEEecCC----CCceEEEEEEEEEEecCCC-Ccccchhhhh---HHHHHHHHHHHHHhCCChhhccEEEEcch
Confidence 23478888887531 22222 2445555543 333322 122 35567899999999999999999997554
Q ss_pred CC
Q 013946 327 ST 328 (433)
Q Consensus 327 gt 328 (433)
|.
T Consensus 235 g~ 236 (334)
T PRK12404 235 GH 236 (334)
T ss_pred HH
Confidence 44
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-09 Score=105.94 Aligned_cols=90 Identities=16% Similarity=0.080 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|++.|++++|+++++++++|+ -|++||..+.. .....+..+...|
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id-------~Liv~TeS~~d-------------------------~sps~a~~v~~lL 97 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG-------RLEVGTETIID-------------------------KSKSVKTVLMQLF 97 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCC-------------------------CCCchHHHHHHHH
Confidence 467999999999999999998887 78888865321 1233566677755
Q ss_pred C---CCC-CcceecccchHHHHHHHHHHHHHHcCCC--CEEEEecccC
Q 013946 172 G---WMG-PNYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDA 213 (433)
Q Consensus 172 g---l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~--d~~lvgg~d~ 213 (433)
+ .+. .++.+..+|+++..||..|..+|++|.. +.+||+++|.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 4 443 5778999999999999999999999974 9999999997
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1e-10 Score=94.45 Aligned_cols=121 Identities=22% Similarity=0.336 Sum_probs=83.3
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC-CCCccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRV 351 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~-~~~~~v 351 (433)
+++++|.++..... .|...+.+...+++++|+++|++++|||++|.|...+. .++..++.. +- ..++++
T Consensus 2 ~pla~i~~~~~~~~-----~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l~~~~~l-g~~~~~vN~ 71 (123)
T PF02803_consen 2 KPLARIVGYASAGV-----DPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVLAFLEAL-GLDPEKVNP 71 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHHHHHHHH-TTGGGGBST
T ss_pred CeEEEEEEEEEEec-----CHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhh----HHHHhhccc-cccccccCc
Confidence 47789999887532 22223345678999999999999999999999987774 444444433 32 234555
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+..--.+||+.||||+..++.++.+|+++ ..++++.+..+-||...++||+|
T Consensus 72 ~GG~la~GHP~gasG~r~~~~l~~~L~~~----------------------------~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 72 NGGALALGHPLGASGARLVVELAHQLRRR----------------------------GGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp T--HHHH-BHTTTHHHHHHHHHHHHHHHH----------------------------TTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccccccccccccchhhhhHHHHHHh----------------------------chhhhhHHhcccceeeEEEEEEC
Confidence 55555679999999999999999999861 13567777788899999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.6e-10 Score=97.90 Aligned_cols=123 Identities=19% Similarity=0.313 Sum_probs=110.9
Q ss_pred CCCChhhhhcCCHHHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccc
Q 013946 79 GWVAPKLSKRMDKFMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 157 (433)
Q Consensus 79 ~~i~~~~~~~~~~~~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (433)
.+|++.+.|||++..||++.++.+++++. .++ .+++++..|++....++++.+..+ +.++|..|.+
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~~~d------------~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~ 87 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDEQPD------------AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQ 87 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccCCCC------------cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhh
Confidence 45899999999999999999999998652 221 789999999999999999998654 4699999999
Q ss_pred cccchHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 158 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 158 ~~~~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
++.|..++++++..+.++|+.++..+-.+...||..|+..|..| .+.|||+..|..+
T Consensus 88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999 9999999999844
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=102.21 Aligned_cols=92 Identities=27% Similarity=0.306 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.++++++|+++++++++|| .|++|+..... ....++..++...
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id-------~v~~G~~~~~~-------------------------~g~~~ar~~~l~a 73 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID-------AVIVGNVLQEG-------------------------EGQNIARQAALAA 73 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE-------EEEEE-SSSCT-------------------------TTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhh-------hcCcccccccc-------------------------cchhhhhhhhhhc
Confidence 467889999999999999999888 89999865211 1334566777778
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
||. -|.++|+.+|+||+.||..|+..|++|++|++|+||+|.+.
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS 119 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMS 119 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETT
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccc
Confidence 883 38999999999999999999999999999999999999953
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.9e-08 Score=89.66 Aligned_cols=189 Identities=15% Similarity=0.214 Sum_probs=120.3
Q ss_pred CCCEEEEecceecCcC---CCHHHHHHHHHcCCCCceeC--C---C-CCCCCCCcc--ccccccCCCCCCCCChhhhhcC
Q 013946 21 QKRVVVTGMGLVSPLG---HEPDVFYNNLLEGVSGISEI--E---T-FDCTSFPTK--IAAEIKSFSTDGWVAPKLSKRM 89 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~~~~~~~--~---~-~~~~~~~~~--~~~~i~~~~~~~~i~~~~~~~~ 89 (433)
.++|+++.+.|.-|.- .+.+.+++..+.-.. +.+- + + ++..++... ....+....+. .......
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~----~s~~~a~ 80 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEESLDFQRKILERSGLGDETYLPPALHEIPPD----PSLAAAR 80 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhHHHHHHHHHHhcCCCccccCCcccccCCCc----ccHHHHH
Confidence 4589999999999886 478888887654321 1110 0 0 001111000 00000001111 1111112
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
+-...++..++.++|+++|+.|++|| .+++.++. +...+.++.+|.+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dId-------iLVvncs~--------------------------f~ptPSLsamIvn 127 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDID-------ILVVNCSL--------------------------FNPTPSLSAMIVN 127 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECcC--------------------------CCcCCcHHHHHHH
Confidence 33445778899999999999998887 67776653 2334567889999
Q ss_pred HhCCCCC--ccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCC
Q 013946 170 DLGWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246 (433)
Q Consensus 170 ~lgl~Gp--~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 246 (433)
.||++.- ++.+ ..||++|+.+|..|.++|+...-..+||+.+|.. ++..+.+-++...++
T Consensus 128 r~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~-s~~~Y~G~~rsmlv~---------------- 190 (290)
T PF08392_consen 128 RYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENI-SANWYRGNDRSMLVS---------------- 190 (290)
T ss_pred HhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeec-ccccccCCcHHHhhc----------------
Confidence 9999864 3433 4489999999999999999999999999999983 343333333333322
Q ss_pred CCCcccccceeEEEecchHH
Q 013946 247 RDGFVMGEGAGVLLLEELEH 266 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~ 266 (433)
.+++.+|++|++|.+...
T Consensus 191 --NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 191 --NCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred --cccccCCceeEEeecCcc
Confidence 356889999999987654
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.2e-08 Score=95.27 Aligned_cols=120 Identities=12% Similarity=0.104 Sum_probs=85.5
Q ss_pred HHHHHHH-HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLT-AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~-aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
...|++. |+.+||+++|++|++|| -+++.++ + ....+..+..+...
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID-------~LIvs~T-~-------------------------~~~~Pslaa~l~~~ 179 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG-------IFIVNCS-L-------------------------FNPNPSLSSMIVNR 179 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECc-C-------------------------CCCCchHHHHHHHH
Confidence 3445555 77788899999998877 5554332 1 11235567889999
Q ss_pred hCCC-C-Ccceecc-cchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWM-G-PNYSIST-ACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~-G-p~~~v~~-acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++ . ..+.++. ||++++.+|..|.++++++....+||+++|... ...+. +-|...
T Consensus 180 LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S-~~~~~--------------------~~dr~~ 238 (466)
T PLN00415 180 YKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMT-LSMYR--------------------GNDRSM 238 (466)
T ss_pred hCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-ccccC--------------------CCcHhH
Confidence 9997 3 5677887 999999999999999999999999999999732 11100 001000
Q ss_pred --CCcccccceeEEEecchH
Q 013946 248 --DGFVMGEGAGVLLLEELE 265 (433)
Q Consensus 248 --~G~~~geGaaalvL~~~~ 265 (433)
..+++||||+|+||++..
T Consensus 239 lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 239 LVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred hccceeecccceEEEEecCc
Confidence 125689999999999743
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.4e-08 Score=88.96 Aligned_cols=190 Identities=15% Similarity=0.170 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...+.+++.++||+.+++.|++|+ .|++.+++| ...+.+-.+|...|
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId-------~vv~vtsTG--------------------------~~~Ps~dari~~~L 122 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDID-------AVVTVTSTG--------------------------LATPSLDARIVGEL 122 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCc-------EEEEEeecc--------------------------ccCCChhHHHHhhc
Confidence 456889999999999999999887 777776643 22344456788899
Q ss_pred CCCCCc--c-eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 172 GWMGPN--Y-SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 172 gl~Gp~--~-~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
||.-.. + .-.-||+++..++..|+++.+..-...+||+.+|.+. .++ ++.++.+
T Consensus 123 gl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCS--Lt~---------------------~~~d~t~ 179 (356)
T COG3424 123 GLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCS--LTY---------------------VFADDTK 179 (356)
T ss_pred CCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeee--eee---------------------ecCCCCc
Confidence 996422 1 2456999999999999999999999999999999732 111 1111111
Q ss_pred -C----cccccceeEEEecchHHHHhcCCeEE-E--------------EEEEeeeccCCCCCC----CCCCChHHHHHHH
Q 013946 249 -G----FVMGEGAGVLLLEELEHAKKRGAKIY-A--------------EFRGGSFTSDAYHMT----EPHPDGVGVILCI 304 (433)
Q Consensus 249 -G----~~~geGaaalvL~~~~~A~~~g~~i~-a--------------~i~g~~~~~d~~~~~----~~~~~~~~~~~ai 304 (433)
. -++|||++|+|+.-...+. +..+. . .+.||.+..+|.+.. .|.--...+...+
T Consensus 180 s~lVgtaLF~DG~AA~vv~gd~~~~--~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V 257 (356)
T COG3424 180 SNLVGTALFGDGAAAVVVSGDRRAE--GKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNV 257 (356)
T ss_pred ccceeeeeecCCeeEEEEecccccc--ccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhH
Confidence 2 3589999999998533221 11111 1 234555555555321 1111224556778
Q ss_pred HHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHc
Q 013946 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG 344 (433)
Q Consensus 305 ~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~ 344 (433)
...|..-|++.+||+.+.+|=-|-+. ++++.+.++
T Consensus 258 ~~fL~~~~ls~~dI~~w~~HPGG~KV-----ida~~~sLg 292 (356)
T COG3424 258 TTFLATHGLSIEDIEAWVVHPGGPKV-----IDAYEESLG 292 (356)
T ss_pred HHHHHHcCCchhhhceeeeCCCCchH-----HHHHHHhcC
Confidence 99999999999999999999655543 444444444
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.8e-07 Score=80.39 Aligned_cols=120 Identities=16% Similarity=0.132 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+.+||+++|+++++|+ .+|+-+++| ...+.+-.++...
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIt-------hlv~vs~TG--------------------------~~~PglD~~l~~~ 145 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDIT-------HLVTVSCTG--------------------------IAAPGLDARLINR 145 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGEC-------EEEEEESSS--------------------------SECS-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccc-------eEEEEecCC--------------------------cCCCchhHHHHhc
Confidence 3457899999999999999998887 777777653 2344556789999
Q ss_pred hCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHH---HHHhhhhhcCCCCCCCCCcccc
Q 013946 171 LGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG---FVACRALSQRNNDPTKASRPWD 244 (433)
Q Consensus 171 lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~---~~~~~~ls~~~~~~~~~~~pfd 244 (433)
|||+.- .....-||.+|..+|..|.+..++..-..|||+.+|.+. ..+.. ......++
T Consensus 146 LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs--l~~~~~~~~~~~~lv~-------------- 209 (226)
T PF00195_consen 146 LGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS--LHFQAPNDDSLDNLVA-------------- 209 (226)
T ss_dssp HT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG--GTHHHCCTTSHHHHHH--------------
T ss_pred CCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE--EEEecCCcccHHHHhH--------------
Confidence 999753 234667999999999999999999999999999999743 22211 00111111
Q ss_pred CCCCCcccccceeEEEecc
Q 013946 245 INRDGFVMGEGAGVLLLEE 263 (433)
Q Consensus 245 ~~~~G~~~geGaaalvL~~ 263 (433)
..++||||+|+||..
T Consensus 210 ----~aLFgDGaAA~vv~~ 224 (226)
T PF00195_consen 210 ----NALFGDGAAAVVVGA 224 (226)
T ss_dssp ----HHHB-EEEEEEEEES
T ss_pred ----HhhhcCCceEEEEcc
Confidence 235899999999974
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.5e-07 Score=70.71 Aligned_cols=64 Identities=27% Similarity=0.386 Sum_probs=47.3
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
|.|+++|++++.||+.|..+|++|+++.+||++.|.......+ ......+++||||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~-----------------------~~~~~~~~~gDgAa 57 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR-----------------------TDRQTAFIFGDGAA 57 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT-----------------------THHHHHTTB-EEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc-----------------------cccCcceeecchhe
Confidence 4578999999999999999999999999999999983221100 01123457999999
Q ss_pred EEEecch
Q 013946 258 VLLLEEL 264 (433)
Q Consensus 258 alvL~~~ 264 (433)
|+||++.
T Consensus 58 A~vl~~~ 64 (80)
T PF08545_consen 58 AVVLSRD 64 (80)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999975
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.8e-06 Score=75.24 Aligned_cols=176 Identities=22% Similarity=0.175 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|..+|+..||+++++++++|| ++++... .+ ....++..+..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId--------~~~aGDL-------------------------ln--Q~i~s~f~ar~l 95 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID--------YLFAGDL-------------------------LN--QIISSSFAARDL 95 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S--------EEEEEET-------------------------TC--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe--------EEEehhh-------------------------hh--hhHHHHHHHHhc
Confidence 357889999999999999998776 4555322 01 122345566666
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
++ |-+-+..+|++...+|.+|..+|..|-+|.+|++......+...-..|- . .-+..||-... .
T Consensus 96 ~i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P-----~-----EyG~Qrp~tAq----w 159 (329)
T PF07451_consen 96 GI--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP-----T-----EYGGQRPPTAQ----W 159 (329)
T ss_dssp T----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------G-----GGT----TT------E
T ss_pred CC--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc-----h-----hccCCCCCccc----E
Confidence 65 7777899999999999999999999999999999887654332221111 0 01223443222 2
Q ss_pred cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC--h----HHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--G----VGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~--~----~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
.--|++++||.+.. ..++..-.-.+-..| ....+|+ + .+....|.+-|++.|.+|+|-|.|.+-+
T Consensus 160 TVTGaGa~il~~~~------~~p~It~~T~GkVvD---~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGD 230 (329)
T PF07451_consen 160 TVTGAGAAILSKEG------SGPRITHATIGKVVD---MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGD 230 (329)
T ss_dssp E--EEEEEEEESS--------SEEEEEEE----B----SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS
T ss_pred EEeceEEEEEecCC------CCcEEEEEEEEEEEE---cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecc
Confidence 33478999998642 223222111121112 1111222 2 2445678899999999999999999644
Q ss_pred CC
Q 013946 326 TS 327 (433)
Q Consensus 326 ~g 327 (433)
.|
T Consensus 231 Lg 232 (329)
T PF07451_consen 231 LG 232 (329)
T ss_dssp -H
T ss_pred hH
Confidence 33
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.96 E-value=4e-05 Score=65.27 Aligned_cols=140 Identities=17% Similarity=0.204 Sum_probs=89.6
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
+++|-|.+|+..+|-- .+.+++.+. .|.+.- +|.. ++.... ..| .++ -.-...|++.|
T Consensus 2 p~~VGI~~i~~y~p~~~v~~~~La~~--~g~d~~----K~~~-glgq~~----~av-----~~~-----~ED~vTmA~nA 60 (174)
T PF01154_consen 2 PQNVGIDAIEFYIPRYYVDQEELAEA--RGVDPG----KYTI-GLGQEK----MAV-----PPP-----DEDIVTMAANA 60 (174)
T ss_dssp -SSEEEEEEEEE-ESEEEEHHHHHHH--TTS-TC----HHHT-TT--SE----EEE-------T-----TS-HHHHHHHH
T ss_pred CccccEeEEEEecCceEecHHHHHHH--hCCCHH----Hhhh-hcCeeE----EEe-----CCC-----cccHHHHHHHH
Confidence 4689999999999987 688876543 122110 0100 000000 001 011 11235699999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCCC---
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP--- 176 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp--- 176 (433)
++.+|++.++++++|+ -+++||-++-. ..-..+..+..+||+.+.
T Consensus 61 a~~ll~~~~id~~~Ig-------~l~vgTES~vD-------------------------~sKs~~t~v~~ll~~s~~~~~ 108 (174)
T PF01154_consen 61 AKPLLDRYNIDPDDIG-------RLIVGTESGVD-------------------------KSKSISTYVHQLLGLSGNPDC 108 (174)
T ss_dssp HHTTHHHHT-HHHHEE-------EEEEE-SS-SB-------------------------SSS-HHHHHHHHTTTTT-SSS
T ss_pred HHHHHHHcCCCHHHcc-------EEEEecccccc-------------------------ccccHHHHHHHHhCcCCCCce
Confidence 9999999998887776 67888864211 112357788899999553
Q ss_pred -cceecccchHHHHHHHHHHHHHHcCCCC--EEEEecccC
Q 013946 177 -NYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDA 213 (433)
Q Consensus 177 -~~~v~~acas~~~Al~~A~~~i~~G~~d--~~lvgg~d~ 213 (433)
.+-+-.+|-+|..||..|..+|+++..| .+||++.|.
T Consensus 109 ~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 109 RGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 3457889999999999999999998765 899999997
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0013 Score=50.33 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=54.7
Q ss_pred HHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 387 (433)
|+++|++++|||++..|-...+ -.+.+.+.++-.... +...-..+||+.+|+-.+.+.. .++++.+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi~~~~-~~~~~~~~Gn~~sa~~~~~L~~---~~~~g~~----- 66 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGIPPER-FPDNLAEYGNTGSASIPINLAD---ALEEGRI----- 66 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS-GGG-BE-THHHH-B-GGGHHHHHHHH---HHHTTSS-----
T ss_pred CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCCcHHH-HHHHHhccCcchhhhHHHHHHH---HHHcCCC-----
Confidence 6899999999999999965543 344466666543221 2223377899999986666644 4444332
Q ss_pred CCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+-+.+++.++|.|.+.++++++
T Consensus 67 --------------------~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 67 --------------------KPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp --------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred --------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence 12457777899999888888875
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.38 E-value=1.6 Score=43.81 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=58.1
Q ss_pred EEEEEeeeccCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH-HHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTEP--HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI-KEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~--~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~-~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+.+...+ ....+-..+++++||+++||+++|||.|... +.++..+. .....+....+-..+++..
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 83 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW 83 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence 457777665544422111 1223455789999999999999999987643 22222221 2222233334432122322
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..++||+..+..+..+++.|.
T Consensus 84 ~v-----~~~CaSg~~al~~A~~~I~sG~ 107 (426)
T PRK08170 84 TV-----QRNCASGMQALDSAAANIALGR 107 (426)
T ss_pred ec-----cchhhHHHHHHHHHHHHHHCCC
Confidence 22 2337888888999999998875
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.47 E-value=2.5 Score=42.00 Aligned_cols=100 Identities=12% Similarity=0.013 Sum_probs=56.8
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+.+... .....+-..+++++||+++||+++|||.|..- +.++... ..-...+....+-...+|..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl~~~~p~~ 82 (404)
T PRK06205 4 AVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGLPVTVPGM 82 (404)
T ss_pred eEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCCCCCcee
Confidence 45667666654442211 11123445789999999999999999988643 2222111 11112222223322112222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..++||+..+..+...++.|.
T Consensus 83 ~V-----~~~CaSg~~Al~~A~~~I~sG~ 106 (404)
T PRK06205 83 QL-----DRRCGSGLQAVITAAMQVQTGA 106 (404)
T ss_pred eh-----hhhhhHHHHHHHHHHHHHHcCC
Confidence 21 4567888989999999998875
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=88.69 E-value=2.3 Score=42.09 Aligned_cols=100 Identities=16% Similarity=0.071 Sum_probs=56.2
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|++.+.-+.+... .....+-..++++++|+++||+++|||.+.+ +......+ ......+...++-...+|..
T Consensus 3 v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~-~~~~~~~~~~~Gl~~~~p~~ 81 (394)
T PLN02644 3 VCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG-QAPARQAALGAGLPPSTICT 81 (394)
T ss_pred EEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcC-CcHHHHHHHhcCCCCCCceE
Confidence 34667766544432211 1122345678999999999999999999865 21111101 11112232333322122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..++||+..+..+..+++.|.
T Consensus 82 ~v-----~~~caSg~~av~~Aa~~I~sG~ 105 (394)
T PLN02644 82 TV-----NKVCASGMKAVMLAAQSIQLGI 105 (394)
T ss_pred EE-----eccchHHHHHHHHHHHHHHcCC
Confidence 22 3468899888999999998774
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.63 E-value=2.1 Score=42.42 Aligned_cols=98 Identities=18% Similarity=0.164 Sum_probs=56.9
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHH-HHHHHHHHHcCCCCcccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK-EYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~-E~~al~~~~~~~~~~~v~s~ 354 (433)
+.|.|++.+.-+.+.. ....+-..+++++||+++||+++|||.+.+..+........ -...+....+.. ..+...+
T Consensus 11 vaIvG~g~t~~~~~~~--~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V 87 (392)
T PRK06065 11 VAVIGAGLTLFRRRLL--ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRV 87 (392)
T ss_pred eEEEEecccCCcCCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEE
Confidence 4588888765444321 11234457899999999999999999987632211111111 111233333322 1222111
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
+..+++|...+..+..+++.|.
T Consensus 88 -----~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 88 -----YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred -----ecCchhHHHHHHHHHHHHhCCC
Confidence 3357888888888999999885
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.45 E-value=2.6 Score=41.74 Aligned_cols=101 Identities=17% Similarity=0.063 Sum_probs=56.7
Q ss_pred EEEEEeeeccCCCCCCC-CC-CChHHHHHHHHHHHHHcCCCCCCccEEEec-cCCCCCCCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE-PH-PDGVGVILCIEKALAHSGVSREDVNYINAH-ATSTPAGDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~-~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h-~~gt~~~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+..... .+ ...+-..+++++||+++|++++|||.|.+- .+.....+......+....+-....|..
T Consensus 5 v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~ 84 (394)
T PRK09051 5 VVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAF 84 (394)
T ss_pred EEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceE
Confidence 45666665544332111 11 123445789999999999999999987653 2221111222333333222322112322
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +...+||+..+..+...++.|.
T Consensus 85 ~V-----~~aCaSg~~Al~~A~~~I~sG~ 108 (394)
T PRK09051 85 NV-----NRLCGSGLQAIVSAAQAILLGD 108 (394)
T ss_pred Ee-----cccchHHHHHHHHHHHHHHcCC
Confidence 22 3457788888888888888775
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.16 E-value=1.9 Score=42.67 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=58.3
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~s~ 354 (433)
+.|.|++.+.-+.+.. ....+-..+++++||+++||+++|||.+.+. +.++.++ ......+...++-....+ ..+
T Consensus 3 v~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~~-~~v 78 (385)
T PRK12578 3 VAVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTGKVP-LRV 78 (385)
T ss_pred eEEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCCCCe-eEE
Confidence 3477777664333321 1123445689999999999999999998753 3332111 112233444444321111 111
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCCc
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGWI 382 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~i 382 (433)
+..+++|+..+..+...++.|..
T Consensus 79 -----~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 79 -----EAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred -----eccCHHHHHHHHHHHHHHHCCCC
Confidence 34677888889899999988853
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.71 E-value=14 Score=35.77 Aligned_cols=161 Identities=19% Similarity=0.200 Sum_probs=92.4
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHH--HHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNN--LLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 97 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~--l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l 97 (433)
+..|.|.|+-+.+|.. .+-+++... ...|+-.|.. .... -.|.+.++ | ...|.+
T Consensus 9 p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGL---------Gq~~---------MgfcsdrE----D-i~Sl~l 65 (462)
T KOG1393|consen 9 PKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGL---------GQTQ---------MGFCSDRE----D-IISLSL 65 (462)
T ss_pred ccccceeEEEEEcCccccChhhHhhcCCccccceEecc---------Ccce---------ecccCchh----h-hhhhhH
Confidence 3589999999999998 455554321 1112111110 0000 01122222 1 345788
Q ss_pred HHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--
Q 013946 98 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-- 175 (433)
Q Consensus 98 ~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-- 175 (433)
.++...++.-.++++.|. -+-||+..-- |- .-..-..+-..|+=.|
T Consensus 66 tvvs~Lmery~i~~~~IG-------RLEVGTETii-----DK--------------------SKSVKt~LMqLF~~sgNt 113 (462)
T KOG1393|consen 66 TVVSRLMERYNIDPDSIG-------RLEVGTETII-----DK--------------------SKSVKTVLMQLFEESGNT 113 (462)
T ss_pred HHHHHHHHHhCCChhhcc-------eEEecceecc-----cc--------------------chHHHHHHHHHhhhcCCC
Confidence 889999999999987665 4567764310 00 0011122333443111
Q ss_pred --CcceecccchHHHHHHHHHHHHHHcCC--CCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 176 --PNYSISTACATSNFCILNAANHIIRGE--ANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 176 --p~~~v~~acas~~~Al~~A~~~i~~G~--~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
..+...++|-+|..||-.|.++|.+.. -..+||+..|...- +++.+||-
T Consensus 114 dIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY-------------------~~G~aRpT-------- 166 (462)
T KOG1393|consen 114 DIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVY-------------------AKGNARPT-------- 166 (462)
T ss_pred ccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEe-------------------cCCCCCCC--------
Confidence 234566899999999999999998643 34566666665221 44566773
Q ss_pred cccceeEEEecc
Q 013946 252 MGEGAGVLLLEE 263 (433)
Q Consensus 252 ~geGaaalvL~~ 263 (433)
-|-||.|+++..
T Consensus 167 GGAgAVAmLIgP 178 (462)
T KOG1393|consen 167 GGAGAVAMLIGP 178 (462)
T ss_pred CCcceEEEEEcC
Confidence 367888999885
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=86.93 E-value=3.9 Score=40.59 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=58.0
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC--CCCHHHHHHHHHHHcCCCCccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP--AGDIKEYQALIHCFGQNRGLRVNS 353 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~--~~D~~E~~al~~~~~~~~~~~v~s 353 (433)
+.|.|++.+.-+.+. .....-..+++++||+++||+++|||.|... +..+ .........+...++-. +++...
T Consensus 6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~~-~~~~~~~~~~~~a~~va~~lG~~-~~~~~~ 80 (399)
T PRK06059 6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVGA-DTIRNGYPGFVAGATFAQALGWN-GAPVSS 80 (399)
T ss_pred EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCccCCccHHHHHHHHhCCC-CCceec
Confidence 457777766544321 1123456789999999999999999998742 2111 11122223344555532 222222
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 354 TKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 354 ~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
=+..+++|+..+..+..+++.|.
T Consensus 81 -----v~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 81 -----SYAACASGSQALQSARAQILAGL 103 (399)
T ss_pred -----ccchhHHHHHHHHHHHHHHHCCC
Confidence 24567788888888889998875
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=86.80 E-value=2.6 Score=41.87 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=57.5
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~ 354 (433)
+.|.|++.+.-+.... ....+-..++++++|+++||+++|||.+.. ++... .+.......+.+.++-. +.+.
T Consensus 9 v~IvG~g~tp~~~~~~--~~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl~-~~~~--- 81 (398)
T PRK06157 9 VAILGMGCTKFGERWD--AGAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRLP-NIPV--- 81 (398)
T ss_pred eEEEEeccccccccCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCCC-CCCE---
Confidence 4577777654333211 112345678999999999999999998764 22111 00111112344444432 1221
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..=+..++||+..+..++.+++.|.
T Consensus 82 --~~v~~~c~sg~~ai~~A~~~I~sG~ 106 (398)
T PRK06157 82 --TRVENFCATGSEAFRGAVYAVASGA 106 (398)
T ss_pred --EEEecccHHHHHHHHHHHHHHHCCC
Confidence 1125568899999999999999885
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.79 E-value=3.6 Score=40.55 Aligned_cols=98 Identities=11% Similarity=-0.012 Sum_probs=55.0
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC----CHHHHHHHHHHHcCCCCc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG----DIKEYQALIHCFGQNRGL 349 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~----D~~E~~al~~~~~~~~~~ 349 (433)
+.|.|++.+.-+.+... ..+..+-..++++++|+++|++++|||.+.+ |+....+ .......+ ..+-...+
T Consensus 4 v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~-g~~~~~~~~~~~~~~~~~l--~~gl~~~~ 80 (382)
T PRK07801 4 AYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIF-GCVDTIGPQAGNIARTSWL--AAGLPEEV 80 (382)
T ss_pred eEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EeeccCCcccccHHHHHHH--HcCCCCCC
Confidence 34677766544432211 1122345578999999999999999998875 3221111 11111111 11111111
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
+. ..=+..++||+..+..++.+++.|.
T Consensus 81 p~-----~~v~~acaSg~~Av~~Aa~~I~sG~ 107 (382)
T PRK07801 81 PG-----VTVDRQCGSSQQAIHFAAQAVMSGT 107 (382)
T ss_pred ce-----eeecchhhhHHHHHHHHHHHHHCCC
Confidence 11 1113458889989999999999876
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.73 E-value=3.3 Score=41.02 Aligned_cols=100 Identities=17% Similarity=0.052 Sum_probs=54.7
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|++.+.-+.+... .....+-..+++++||+++||+++|||.+.. ++.++.+ .......+....+-....+..
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-g~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 82 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIM-GQVLQAGAGQNPARQAALKAGLPVEVPAL 82 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEE-EEecCCCCCCcHHHHHHHHcCCCCCCcee
Confidence 45777776654432211 1222344578999999999999999998764 2221111 111222222122211011111
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =+..+++|+..+..+..+++.|.
T Consensus 83 ~-----v~~~Casg~~al~~A~~~I~sG~ 106 (393)
T PRK05790 83 T-----INKVCGSGLKAVALAAQAIRAGD 106 (393)
T ss_pred e-----ecccchHHHHHHHHHHHHHHcCC
Confidence 1 13357788888888888888875
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=86.70 E-value=3.3 Score=40.33 Aligned_cols=46 Identities=11% Similarity=0.214 Sum_probs=32.6
Q ss_pred EEEEEeeeccCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEE
Q 013946 276 AEFRGGSFTSDAYHMTEPHPD-GVGVILCIEKALAHSGVSREDVNYIN 322 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~-~~~~~~ai~~al~~agl~~~dId~v~ 322 (433)
+.|.|++.+.-+.+... ... .+-..+++++||++|||+++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~~-~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTDG-TTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCCC-CCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45788887654432211 112 34568899999999999999999884
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.64 E-value=3 Score=41.34 Aligned_cols=100 Identities=15% Similarity=0.061 Sum_probs=57.1
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+.+... .....+-..+++++||+++|++++|||.|.+- +.++..+ ..-..-+....|-....|..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~va~~lGl~~~~p~~ 82 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQAAIKAGLPHSVPAM 82 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHHHHHHcCCCCCcceE
Confidence 45777776655443211 11123445789999999999999999987753 2222111 01111122333322112222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..+++|+..+..+...++.|.
T Consensus 83 ~V-----~~~Casg~~ai~~A~~~I~sG~ 106 (393)
T PRK05656 83 TL-----NKVCGSGLKALHLAAQAIRCGD 106 (393)
T ss_pred Ee-----cccchhHHHHHHHHHHHHHcCC
Confidence 22 3567888888888889898876
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.95 E-value=4.1 Score=40.25 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=57.0
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+..... .....+-..++++++|+++||+++|||.+.. +......+-.. ...+....+-...+|..
T Consensus 4 v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~-a~~~~~~~Gl~~~~p~~ 82 (388)
T PRK06366 4 VYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNP-AGQAAYHAGLPFGVTKY 82 (388)
T ss_pred EEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcH-HHHHHHHCCCCCCCcce
Confidence 45667666544432211 1112344578999999999999999998764 21111111111 11222223322122322
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCCc
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGWI 382 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~i 382 (433)
.+ +..++||+..+..++.+++.|..
T Consensus 83 ~v-----~~~caSg~~av~~Aa~~I~sG~~ 107 (388)
T PRK06366 83 TV-----NVVCASGMLAVESAAREIMLGER 107 (388)
T ss_pred ee-----echhhHHHHHHHHHHHHHhcCCC
Confidence 22 24688999999999999998763
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=85.93 E-value=2.7 Score=41.46 Aligned_cols=94 Identities=14% Similarity=0.061 Sum_probs=56.8
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccch
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK 355 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k 355 (433)
+.|.|++.+.-+.+.. ....+-..+++++||+++||+++|||.+.+... ... .....+.+.++-. +.++.
T Consensus 10 vaIvG~g~t~~~~~~~--~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~---~~~~~la~~lGl~-~~~~~--- 79 (384)
T PRK06158 10 TAIVGAATAGLGEAPG--LSAMELLAQAAHRALADAGLTMADVDGLFTASP-DDA---LWGLSVAEYLGIR-PRFVD--- 79 (384)
T ss_pred EEEEEeeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCC---CcHHHHHHHcCCC-Ceeec---
Confidence 5688888765443311 112345678999999999999999998876321 111 1112344444432 12211
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 356 SMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 356 ~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.-+..++++...+..+...++.|.
T Consensus 80 --~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 80 --GTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred --cccCccHHHHHHHHHHHHHHHcCC
Confidence 123456777777888888888775
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=85.91 E-value=3.9 Score=40.44 Aligned_cols=93 Identities=17% Similarity=0.081 Sum_probs=55.8
Q ss_pred EEEEEeeeccCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPD-GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~-~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~ 354 (433)
+.|.|++.+.-+.+. ..+ .+-..+++++||++|||+++|||.+...... ... ...+...++-....++..
T Consensus 6 v~IvG~g~t~~~r~~---~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~---~~~l~~~lGl~~~~~~~~- 76 (386)
T PRK07855 6 AAIVGIGATEFSKNS---GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP---EIAVARALGIGELKFFSR- 76 (386)
T ss_pred EEEEEeeecccccCC---CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc---HHHHHHHCCCCCCcceee-
Confidence 468888876544331 222 3445789999999999999999988652111 111 123444444321111111
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
=+..+++|...+..++..++.|.
T Consensus 77 ----v~~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 77 ----IHYGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred ----ecCCcHHHHHHHHHHHHHHHCCC
Confidence 13457777777888888888774
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=85.82 E-value=4.5 Score=39.99 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-..+++++||+++|++++|||.+.. ++.++..+ ..-...+...++-...++... =+..+++|+..+..+...
T Consensus 24 ~La~~A~~~AL~dAgl~~~dID~vi~-~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~-----v~~~c~s~~~al~~A~~~ 97 (386)
T cd00751 24 DLGAAVIKALLERAGLDPEEVDDVIM-GNVLQAGEGQNPARQAALLAGLPESVPATT-----VNRVCGSGLQAVALAAQS 97 (386)
T ss_pred HHHHHHHHHHHHhcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCCCCCchhh-----hccccHHHHHHHHHHHHH
Confidence 44568999999999999999999875 32221111 111222333333221122211 134577788888888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 98 I~sG~ 102 (386)
T cd00751 98 IAAGE 102 (386)
T ss_pred HHCCC
Confidence 88775
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.74 E-value=3.9 Score=40.55 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC--CHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG--DIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~--D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~ 373 (433)
.+-..+++++||+++||+++|||.|.. |+.++.+ ........ .+.... .+++ ...=+..++||+..+..+
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~-g~~~~~~~~~~~~~~~~-~l~a~~~~~~p-----~~~V~~~CaSg~~ai~~A 105 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIIT-GCALQVGENWLYGGRHP-IFLARLPYNIP-----AMAVDRQCASSLTTVSIG 105 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEE-EeecCCCcccccHHHHH-HHHcCCCCCCc-----chhhhhhhHHHHHHHHHH
Confidence 345578999999999999999998764 3332211 11112221 112111 1122 122356788999999999
Q ss_pred HHHHHcCCc
Q 013946 374 VQAIRTGWI 382 (433)
Q Consensus 374 ~~~l~~~~i 382 (433)
..+++.|..
T Consensus 106 ~~~I~sG~~ 114 (394)
T PRK06445 106 AMEIATGMA 114 (394)
T ss_pred HHHHHcCCC
Confidence 999998853
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=85.61 E-value=3.4 Score=40.78 Aligned_cols=78 Identities=17% Similarity=0.091 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+++++||+++|++++|||.+.. ++.++..+ ......+....+-....+...+ ...+++|+..+..+...
T Consensus 23 ~La~~A~~~Al~dAgl~~~dID~vv~-g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v-----~~~Casg~~al~~A~~~ 96 (386)
T TIGR01930 23 DLGAAVIKELLERNPLDPELIDDVIF-GNVLQAGEQQNIARQAALLAGLPESVPAYTV-----NRQCASGLQAVILAAQL 96 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCCCCceeeee-----cchhhHHHHHHHHHHHH
Confidence 34578999999999999999999875 33322221 2222223333332211222222 24577788888888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 97 I~sG~ 101 (386)
T TIGR01930 97 IRAGE 101 (386)
T ss_pred HHCCC
Confidence 88875
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=84.88 E-value=4.5 Score=40.82 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=56.8
Q ss_pred EEEEEeeeccCCCC-CCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC--HHHHHHHHHHHcCCCCcc
Q 013946 276 AEFRGGSFTSDAYH-MTE-PHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD--IKEYQALIHCFGQNRGLR 350 (433)
Q Consensus 276 a~i~g~~~~~d~~~-~~~-~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D--~~E~~al~~~~~~~~~~~ 350 (433)
+.|.|++.+.-+.+ ... ... ..+-..++++++|+++||+++|||.|.. |+.+.... .....-+....+-...++
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~-G~~~~~~~~~~~~~r~~a~~~Gl~~~~p 126 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVV-GTVLAPGSQRANECRMAAFYAGFPETVP 126 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCcccccchHHHHHHHHCCCCCCcc
Confidence 45778776654432 111 111 2344578999999999999999998864 33222111 111111222223221122
Q ss_pred cccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 351 VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 351 v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
...+ +..++||+..+..+..+++.|.
T Consensus 127 a~~V-----~~~CaSG~~Ai~~Aa~~I~sG~ 152 (452)
T PLN02287 127 VRTV-----NRQCSSGLQAVADVAAAIKAGF 152 (452)
T ss_pred eEEE-----eccCchHHHHHHHHHHHHHcCC
Confidence 2222 4567889989999989888774
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.66 E-value=5.4 Score=39.51 Aligned_cols=100 Identities=18% Similarity=0.067 Sum_probs=56.3
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH-HHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI-KEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~-~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|++.+.-+.+... .....+-..++++++|+++|++++|||.|..- +.++.+|. .-...+....+-...+|..
T Consensus 4 v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 82 (393)
T PRK08235 4 TVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMG-TVLQGGQGQIPSRQAARAAGIPWEVQTE 82 (393)
T ss_pred EEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccCCCCCCHHHHHHHHcCCCCCccee
Confidence 45667665544432111 11123445789999999999999999987753 22221221 1111122222321123322
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..++||+..+..+...++.|.
T Consensus 83 ~V-----~~~CaSg~~Al~~A~~~I~sG~ 106 (393)
T PRK08235 83 TV-----NKVCASGLRAVTLADQIIRAGD 106 (393)
T ss_pred eh-----hhhhhHHHHHHHHHHHHHHCCC
Confidence 22 4457888999999999998875
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=84.22 E-value=6.4 Score=35.98 Aligned_cols=78 Identities=19% Similarity=0.132 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
+-..++++++|+++|++++|||.+....+.....-..-...+...++-. +.+... + ....++++..+..+...|
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~----i-~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS----V-NQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcce----e-ccHhHHHHHHHHHHHHHH
Confidence 3457899999999999999999988654322211123334455566542 122211 1 234556777777777888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 83 ~~g~ 86 (254)
T cd00327 83 QNGK 86 (254)
T ss_pred HCCC
Confidence 8764
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=83.18 E-value=4.2 Score=39.24 Aligned_cols=77 Identities=16% Similarity=0.100 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCC-CCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATST-PAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt-~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-..+|++++|+++|++++|||++... +.+ ....+.-...+.+.++-...++...+ . ...++|+..+..+...
T Consensus 63 ~la~~Aa~~aL~~ag~~~~~Id~li~~-s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v----~-~~C~~~~~al~~A~~~ 136 (338)
T PRK09258 63 DGAIAAGRKALAEAGIDPSDIGLLINT-SVCRDYLEPATACRVHHNLGLPKSCANFDV----S-NACLGFLNGMLDAANM 136 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-cCCCCCCCChHHHHHHHHcCCCCCCceeeh----h-hhhHHHHHHHHHHHHH
Confidence 456789999999999999999998743 332 22333333445555553322222222 1 2345555566666666
Q ss_pred HHcC
Q 013946 377 IRTG 380 (433)
Q Consensus 377 l~~~ 380 (433)
++.|
T Consensus 137 i~~g 140 (338)
T PRK09258 137 IELG 140 (338)
T ss_pred HHcC
Confidence 6655
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.01 E-value=5.3 Score=40.07 Aligned_cols=98 Identities=14% Similarity=-0.046 Sum_probs=57.1
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH-HHH-HHHHHHHcCCCCccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI-KEY-QALIHCFGQNRGLRVNS 353 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~-~E~-~al~~~~~~~~~~~v~s 353 (433)
+.|.|++.+.-+.+.... ...+-..+++++||+++||+++|||.+.+. +.....+. ... ..+....+-. ..+
T Consensus 18 VaIvG~g~Tpfgr~~~~~-~~~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl~-~~~--- 91 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYM-DFRERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGLV-PKP--- 91 (430)
T ss_pred EEEEEeeecCccccCCCC-CHHHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCCC-CCc---
Confidence 567888776544422111 112455789999999999999999997653 21111110 111 1122233321 122
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 354 TKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 354 ~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
...-+..++||...+..++..++.|.
T Consensus 92 --~~~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 92 --SKRIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred --eEEEeCCcHHHHHHHHHHHHHHHcCC
Confidence 12224568899999999999998885
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.40 E-value=6.9 Score=38.67 Aligned_cols=94 Identities=20% Similarity=0.111 Sum_probs=57.6
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccch
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK 355 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k 355 (433)
+.|.|++.+.-+.+... ...+-..+++++||++|||+++|||.+...+. .. .. ....+...++-. +.++..
T Consensus 7 vaIvG~g~t~~~~~~~~--~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~~-~~--~~~~~~~~lGl~-~~~~~~-- 77 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDK--SVAQLHAEVAKGALADAGLSLADVDGYFCAGD-AP-GL--GPASMVDYLGLK-LRHVDS-- 77 (388)
T ss_pred EEEEEEeeccceeCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-CC-Cc--cHHHHHHhCCCC-Ceeecc--
Confidence 45888887755443221 11345678999999999999999998765211 11 11 111244444432 122222
Q ss_pred hhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 356 SMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 356 ~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+..|++|...+..++.+++.|.
T Consensus 78 ---v~~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 78 ---TETGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred ---ccCCcHHHHHHHHHHHHHHHcCC
Confidence 24567888878888889998885
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=82.02 E-value=11 Score=37.71 Aligned_cols=100 Identities=15% Similarity=-0.013 Sum_probs=56.4
Q ss_pred EEEEEeeeccCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMT-EPHPD-GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~-~~~~~-~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+.... ....+ .+-...+++++|+++||++++||.+..- +....++ ..-.+.+....+-...+|..
T Consensus 7 v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G-~~~~~~~~~~~ar~~a~~aGl~~~~P~~ 85 (428)
T PRK08963 7 IAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFG-QVVQMPEAPNIAREIVLGTGMNVHTDAY 85 (428)
T ss_pred EEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEe-ccCCCCCccHHHHHHHHHCCCCCCCcce
Confidence 4567766554433211 11112 2344789999999999999999987652 1111111 11111122222221123333
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..++||+..+..++..++.|.
T Consensus 86 tV-----~~aCaSG~~Ai~~Aa~~I~sG~ 109 (428)
T PRK08963 86 SV-----SRACATSFQAVANVAESIMAGT 109 (428)
T ss_pred ee-----hhhhHHHHHHHHHHHHHHHCCC
Confidence 32 4568899999999999999875
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.98 E-value=8 Score=38.31 Aligned_cols=80 Identities=10% Similarity=-0.012 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-...+++++|+++|++++|||.|.. +.+.....-..-...+....+-...+|...+ +...+||+..+..+..+
T Consensus 29 dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V-----~~aCaSg~~Al~~A~~~ 103 (392)
T PRK07108 29 TLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTV-----NRFCSSGLQTIALAAQR 103 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeee-----cchhhHHHHHHHHHHHH
Confidence 44578999999999999999998764 2221111001122222222232211332222 45688999999999999
Q ss_pred HHcCCc
Q 013946 377 IRTGWI 382 (433)
Q Consensus 377 l~~~~i 382 (433)
++.|..
T Consensus 104 I~sG~~ 109 (392)
T PRK07108 104 VIAGEG 109 (392)
T ss_pred HHCCCC
Confidence 998763
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=81.13 E-value=5 Score=39.69 Aligned_cols=96 Identities=16% Similarity=0.073 Sum_probs=54.8
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCCCcccccc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~ 354 (433)
+.|.|++.+.-+... ......+-...++++||+++|++++|||.+.. ...+..... ..+...++-. .++.
T Consensus 3 v~IvG~~~t~~~~~~-~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~----~~~~~~lGl~-~~~~--- 73 (391)
T PRK08256 3 VFVAGVGMTPFEKPG-ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSG----QRALYEVGMT-GIPI--- 73 (391)
T ss_pred EEEEeccccccccCC-CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchh----HHHHHHcCCC-CCCC---
Confidence 346776655433211 11112344578899999999999999997644 111211111 1122223321 1121
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCCc
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGWI 382 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~i 382 (433)
..=+..++||+..+..+..+++.|..
T Consensus 74 --~~v~~~caSg~~ai~~A~~~I~sG~~ 99 (391)
T PRK08256 74 --VNVNNNCSTGSTALFLARQAVRSGAA 99 (391)
T ss_pred --cccccccHHHHHHHHHHHHHHHCCCC
Confidence 22245688888889999999998874
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=80.78 E-value=4.2 Score=38.78 Aligned_cols=72 Identities=15% Similarity=0.154 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHh-hhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLL-GAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~-~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||++..... .+-..-...+.+.++ +| .++--. .++++..+..+.+.
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdl---l~Q~~sAs~vA~~LG----IP------a~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDL---LNQIISANFAARELG----IP------FLGLYGACSTMMESLALGSML 124 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECC---CCCcchHHHHHHHhC----Cc------EEEEeccCHHHHHHHHHHHHH
Confidence 35678999999999999999999987643 122222222323332 22 223222 34455567777777
Q ss_pred HHcCCc
Q 013946 377 IRTGWI 382 (433)
Q Consensus 377 l~~~~i 382 (433)
++.|..
T Consensus 125 I~SG~a 130 (337)
T PRK08304 125 IDGGFA 130 (337)
T ss_pred HhcCCC
Confidence 877653
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=80.49 E-value=4.4 Score=38.94 Aligned_cols=77 Identities=17% Similarity=0.085 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
+-..+++++||+++|++++|||++... +.++..-......+...++.. +.+...+. ...++|+..+..+...+
T Consensus 53 ~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~-----~~Casg~~al~~A~~~i 125 (326)
T CHL00203 53 KLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGAT-RAVAFDIT-----AACSGFILALVTATQFI 125 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCC-CCceeeec-----ccchhHHHHHHHHHHHH
Confidence 445789999999999999999998853 433321111123344555533 22221111 13456666777777777
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 126 ~sg~ 129 (326)
T CHL00203 126 QNGS 129 (326)
T ss_pred HcCC
Confidence 7664
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.48 E-value=8 Score=38.37 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=56.2
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC--CCccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN--RGLRV 351 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~--~~~~v 351 (433)
+.|.|++.+.-+.+... .....+-...+++++|+++||+++|||+|.. |+..+.+... .-+.....+.. .++|.
T Consensus 9 V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~-G~~~~~~~~~-~~~~~~~l~ag~~~~~p~ 86 (397)
T PRK06954 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVM-GCVLPAGQGQ-APARQAALGAGLPLSVGC 86 (397)
T ss_pred EEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccch-HHHHHHHHcCCCCCCccE
Confidence 45677765544432111 1112344578999999999999999998764 3222222211 11111122221 11222
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..+ +..++||+..+..+..+++.|.
T Consensus 87 ~~V-----~~aCaSG~~Av~~A~~~I~sG~ 111 (397)
T PRK06954 87 TTV-----NKMCGSGMRAAMFAHDMLVAGS 111 (397)
T ss_pred eec-----cccchHHHHHHHHHHHHHHCCC
Confidence 222 4567899999999999999876
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.47 E-value=6.9 Score=38.66 Aligned_cols=98 Identities=19% Similarity=0.229 Sum_probs=54.1
Q ss_pred EEEEEeeeccC-CCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCccccc
Q 013946 276 AEFRGGSFTSD-AYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNS 353 (433)
Q Consensus 276 a~i~g~~~~~d-~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~s 353 (433)
+.|.|++.+.. +.+.. ....+-..+++++||+++||+++|||.+...-+.....+ ..-...+...+|-. +.+...
T Consensus 5 v~IvG~g~t~~~~~~~~--~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~ 81 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQD--VSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIR 81 (386)
T ss_pred EEEEEeecCCcCccCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEE
Confidence 45788887654 33211 112345678999999999999999998874321110000 00012233444432 112111
Q ss_pred chhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 354 TKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 354 ~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
+ +..+++|...+..+...++.|.
T Consensus 82 ----v-~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 82 ----V-HTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred ----E-eccCHHHHHHHHHHHHHHHCCC
Confidence 1 3345667777778888888774
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=80.21 E-value=4.5 Score=40.19 Aligned_cols=28 Identities=11% Similarity=0.163 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-eccCC
Q 013946 300 VILCIEKALAHSGVSREDVNYIN-AHATS 327 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~-~h~~g 327 (433)
..+|.++||+++|++++|||++. +..|+
T Consensus 110 a~~Aa~~AL~~ag~~~~dId~lI~~T~Tg 138 (401)
T PLN03170 110 GKAAAQKAIKEWGQPKSKITHLVFCTTSG 138 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCC
Confidence 35789999999999999999864 43333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 433 | ||||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 2e-81 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 2e-75 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 1e-68 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 3e-67 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 4e-67 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 1e-66 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 1e-66 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 3e-66 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 7e-66 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 1e-65 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 2e-65 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 1e-63 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-59 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 4e-58 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 2e-56 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-55 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 4e-55 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 1e-53 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-53 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 2e-45 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 5e-45 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 9e-45 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 1e-44 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 4e-44 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 5e-44 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 2e-43 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 2e-43 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 9e-43 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-42 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 2e-41 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 3e-40 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 4e-40 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 1e-39 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 3e-38 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 8e-38 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 4e-35 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 2e-17 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 4e-16 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 6e-14 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 2e-12 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 7e-12 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 8e-12 | ||
| 2uv9_A | 1878 | Crystal Structure Of Fatty Acid Synthase From Therm | 4e-06 |
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
| >pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 575 bits (1486), Expect = 0.0
Identities = 181/429 (42%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 6 QPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFP 65
+ HMK RVVVTG G+ SP+G+ P+ F+N+L G GI I FD + F
Sbjct: 7 HHHSSGLVPRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFD 66
Query: 66 TKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 125
AAEI+ F D + K + R D + LY L A ++A+ + + L++ + GV+
Sbjct: 67 VHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLD---VEALNRDRFGVI 123
Query: 126 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 184
+ SG+GG+K D + L K++ P +P A NM S +AM G G SI+TAC
Sbjct: 124 VASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTAC 183
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 244
++SN I +A I G +VML GG++A++ P + GF A ALS DPT+AS P+D
Sbjct: 184 SSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFD 242
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
+R+GFVMGEG+G+L+LE LEHA+KRGA I AE G T DAYHMT PHP+G G I I
Sbjct: 243 KDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAI 302
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGA 364
+ AL + +S E V Y+NAH TSTPA + E A++ G+ + V+STKS GHLLGA
Sbjct: 303 KLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE--VPVSSTKSFTGHLLGA 360
Query: 365 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHN 424
AGAVEAI ++A+R ++ ++ NV+ G E+ E+ A+SN+FGFGGHN
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEK-EIPYAISNTFGFGGHN 419
Query: 425 SSIIFSPYK 433
+ + F ++
Sbjct: 420 AVLAFKRWE 428
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 569 bits (1468), Expect = 0.0
Identities = 188/417 (45%), Positives = 259/417 (62%), Gaps = 6/417 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
+++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDAT 63
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K +KRMD+F + + A ++A+ D + +NEL+ + GVLIG+G+GG+KV D
Sbjct: 64 QFLDRKEAKRMDRFCHFAVCASQQAINDAKLV---INELNADEIGVLIGTGIGGLKVLED 120
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
L + +PF +P NM S + A++LG GPN TACA + I +A
Sbjct: 121 QQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRL 180
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
+ G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+G
Sbjct: 181 VQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+L+LEELE A RGAKIY E G + T DAYH+T P PDG G I AL SG+ E
Sbjct: 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
V+YINAH TSTPA D+ E +A+ G + + V+STKSM GHLLG +G +EA+A V A
Sbjct: 301 VSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA 360
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
I + P INLENPD D + V + L V ALSNSFGFGGHN ++ F Y+
Sbjct: 361 IAEDKVPPTINLENPDPECDLD-YVPGQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 567 bits (1464), Expect = 0.0
Identities = 186/413 (45%), Positives = 266/413 (64%), Gaps = 5/413 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
+ ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 74
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K ++MD F+ Y + AG +A+ D G+ + E + ++ G IGSG+GG+ + +
Sbjct: 75 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLE---ITEENATRIGAAIGSGIGGLGLIEE 131
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+L +K++PF VP NM + L + G GP+ SI+TA + I +AA
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARI 191
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+G+GAG
Sbjct: 192 IAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAG 251
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+L+LEE EHAKKRGAKIYAE G +SDAYHMT P +G G L + AL +G+
Sbjct: 252 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 311
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
+ Y+NAH TSTPAGD E QA+ FG+ + V+STKSM GHLLGAAGAVE+I + A
Sbjct: 312 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA 371
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
+R + P INL+NPD D + + ++ ++ L NSFGFGG N S+IF
Sbjct: 372 LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 424
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 169/437 (38%), Positives = 247/437 (56%), Gaps = 13/437 (2%)
Query: 7 PDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPT 66
E T+ M RVVVTG+G+VSPLG ++ + L+ G SG+ +
Sbjct: 10 GTLEAQTQGPGSMT-LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSA 68
Query: 67 KIAAEIK--------SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELD 118
K+ ++ F + V K ++MD+F+ + A +ALA+ G E
Sbjct: 69 KVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGW--APEAEQQ 126
Query: 119 KSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177
+ + ++ SG+GG +A+ ++++PF +PF +N+ + +++ + GP
Sbjct: 127 RERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPL 186
Query: 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-P 236
TACA S I +A I GEA+V+L GG++AA + LGGF A RALS ++ P
Sbjct: 187 GCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEP 246
Query: 237 TKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 296
+ASRP+D +RDGFVMGEGA ++++E L+HA RGA+ AE G T+DAYHMT D
Sbjct: 247 VRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDD 306
Query: 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS 356
G G + ++ AL V+ E V+Y+NAHATSTP GD E +AL FG G ++STKS
Sbjct: 307 GSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKS 366
Query: 357 MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416
GHLLGAAGA+EA + A+R G + +NLE+PD D L+GP + V+ ALSN
Sbjct: 367 ATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSN 426
Query: 417 SFGFGGHNSSIIFSPYK 433
FGFGG N+S++F Y
Sbjct: 427 GFGFGGVNASVLFRRYP 443
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 562 bits (1451), Expect = 0.0
Identities = 173/417 (41%), Positives = 266/417 (63%), Gaps = 7/417 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
M ++RVVVTG+G V+P+G++ + + N +GV+G++++ + FP KIAAE+K F +
Sbjct: 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVE 60
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
++ K +++MD+F Y + + + A+ D G+ +++ + ++ GV IGSG+GGM+ F
Sbjct: 61 KYLEKKEARKMDRFTHYAIASAEMAVQDSGLV---IDDSNANRVGVWIGSGIGGMETFET 117
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
E +++++PF VP +MGS +++ G G N + TACAT+ I +A
Sbjct: 118 QYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKV 177
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I RG+A+ M+ GG++A + + L GF A +ALS N DP A RP+D +RDGF++GEGAG
Sbjct: 178 IERGDADAMITGGAEAPITKMSLAGFTANKALS-LNPDPETACRPFDKDRDGFIIGEGAG 236
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+++LEE EHAK RGAKIYAE G T DAYH+T P P+G G ++ A+ +G++ +
Sbjct: 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
V+YINAH TSTP D E QA+ FG++ + L ++STKSM GH LGA+G +EAI +
Sbjct: 297 VDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLT 356
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
IR I P I+L+N D V D + V + V +SNSFGFGGHN++++F +
Sbjct: 357 IRDNIIAPTIHLKNQDEVCDLD-YVPNEAREANVNVVISNSFGFGGHNATLVFKRIE 412
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 562 bits (1451), Expect = 0.0
Identities = 171/417 (41%), Positives = 260/417 (62%), Gaps = 7/417 (1%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 25 SQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIE 84
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F
Sbjct: 85 DHIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEI 141
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
A + L ++++PF VP +M + +++DLG GPN + TACAT I A
Sbjct: 142 AHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKI 201
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
+ RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG
Sbjct: 202 VQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAG 260
Query: 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317
+L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +D
Sbjct: 261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320
Query: 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
V Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +
Sbjct: 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS 380
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
I+ + P I+ PD D + +V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 381 IKDSKVAPTIHAVTPDPECDLD-IVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 560 bits (1445), Expect = 0.0
Identities = 192/410 (46%), Positives = 267/410 (65%), Gaps = 8/410 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G ++P+G + F+ L G SG+ I FD ++ P +IAAE+ ++
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYL 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K +R+D+F+ Y L A + AL D G+ +LD + G L+G+G+GGM+ +
Sbjct: 61 DRKELRRLDRFVQYALIAAQLALEDAGLK---PEDLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 142 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
+++PF +P NM SA +AM G+ GP+ ++ TACAT + +A I
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
GEA+++L GG++AA+ P+ +G F RALS RN +P KASRP+ ++RDGFVMGEGAGVL+
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 320
LE EHAKKRGA+IYAE G ++DA+H+TEPHP+G G L + +AL +G++ E V Y
Sbjct: 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGY 297
Query: 321 INAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379
INAH TSTP GD E A+ FG + + L V+STKSMIGHLLGAAGAVEAIA VQA+
Sbjct: 298 INAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYH 357
Query: 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
G I P INLE+PD +D + + P+ +V ALSNSF FGGHN+ + F
Sbjct: 358 GVIPPTINLEDPDPELDLDFV--PEPREAKVDYALSNSFAFGGHNAVLAF 405
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 558 bits (1441), Expect = 0.0
Identities = 181/429 (42%), Positives = 255/429 (59%), Gaps = 14/429 (3%)
Query: 14 KKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK 73
H +RVV+TG+GLVSPL + + LL G SG + F+ +IA I
Sbjct: 2 AHHHHHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIP 61
Query: 74 S-------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLI 126
F+ D + PK +++D F++Y + A +AL D G N+ D+ + GVLI
Sbjct: 62 VGDGTNGTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGW--HPENDEDQVRTGVLI 119
Query: 127 GSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACA 185
GSG+GG++ +A LR ++++PF +P N+ S +++ GPN+S+ TACA
Sbjct: 120 GSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACA 179
Query: 186 TSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALS-QRNNDPTKASRPWD 244
T I +AA I G+A+VM+ GG+++ V I L GF AC+ALS +RN+DPT ASRP+D
Sbjct: 180 TGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYD 239
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
+RDGFVMGEGAG+++LEELEHA RGAKIYAE G + DA+H+T P G G C+
Sbjct: 240 EDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCM 299
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 363
AL +G+ ++++YINAH TST D E A+ G+ + ++STKS IGHLLG
Sbjct: 300 VAALKRAGIVPDEIDYINAHGTSTM-ADTIELGAVERVVGEAAAKISMSSTKSSIGHLLG 358
Query: 364 AAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGH 423
AAGA EA+ AIR +NL+NP A + LV K ++ ALSNSFGFGG
Sbjct: 359 AAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRID-LVPHKPRERKIDVALSNSFGFGGT 417
Query: 424 NSSIIFSPY 432
N+S++ Y
Sbjct: 418 NASLVLRRY 426
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 557 bits (1437), Expect = 0.0
Identities = 163/430 (37%), Positives = 242/430 (56%), Gaps = 16/430 (3%)
Query: 12 TTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAE 71
+ + + + +RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA
Sbjct: 12 SIEGRSRLH-RRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAY 70
Query: 72 IKS------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 125
+ F+ +V+ K M + + A + A+ D G +E D+ GV
Sbjct: 71 VPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGW--HPQSEADQVATGVA 128
Query: 126 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 184
IG G+ ++V + + Y K++PF VP NM + +++ GPN+++STAC
Sbjct: 129 IGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTAC 188
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 244
T + ++ I G+A+VM+ GG+D+ + P+ L GF RALS N+DP A RP+
Sbjct: 189 TTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFH 247
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
RDGFVMGEGA VL+LEE EHA +R A+IYAE G + DA H+T P P+G G + C+
Sbjct: 248 PKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCM 307
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 363
AL +GV E+++YINAHATSTP GD E +A+ H F + L V+STK GHLLG
Sbjct: 308 AAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLG 367
Query: 364 AAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA---ALSNSFGF 420
AAGAVEA A + P +NL+ + D N V K + + + L+NSFGF
Sbjct: 368 AAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN-YVPLKAQEWKTEKRFIGLTNSFGF 426
Query: 421 GGHNSSIIFS 430
GG N+++ +
Sbjct: 427 GGTNATLCIA 436
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 134/424 (31%), Positives = 217/424 (51%), Gaps = 12/424 (2%)
Query: 12 TTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF--PTKIA 69
+ + VVVT + + + + + + LL G SGI +E T + KI
Sbjct: 2 SQPSTANGGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIG 61
Query: 70 AEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 129
+K + +RM G + G E +D + V++G+G
Sbjct: 62 GHLKDPVDS-HMGRLDMRRMSYVQRMGKLLGGQLWESAGSPE-----VDPDRFAVVVGTG 115
Query: 130 LGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSN 188
LGG + ++ + + +K++P V N +A++ + LG + +AC++ +
Sbjct: 116 LGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGS 175
Query: 189 FCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248
I +A I+ G+A+V +CGG + + + + F RA+S RN++P +ASRP+D +RD
Sbjct: 176 EAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRD 235
Query: 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 308
GFV GE ++L+E EHAK RGAK A G TSDA+HM P DGV + ++L
Sbjct: 236 GFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSL 295
Query: 309 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAV 368
+G+S D++++NAH T+TP GD E A+ V + KS +GH +GA GA+
Sbjct: 296 ELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQ--AAVYAPKSALGHSIGAVGAL 353
Query: 369 EAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
E++ V +R G I P +N E PD +D +V V + + + A++NSFGFGGHN ++
Sbjct: 354 ESVLTVLTLRDGVIPPTLNYETPDPEIDLDV-VAGEPRYGDYRYAVNNSFGFGGHNVALA 412
Query: 429 FSPY 432
F Y
Sbjct: 413 FGRY 416
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 552 bits (1425), Expect = 0.0
Identities = 135/422 (31%), Positives = 210/422 (49%), Gaps = 13/422 (3%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
MK +RVV+TG+G+ +P G+ F+ L G + I FD + + +++AAE
Sbjct: 1 MK-RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVA 59
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
P+ RMD+ + + ++A A G+ + LD ++ GV +GS +
Sbjct: 60 EGFGPRELDRMDRASQFAVACAREAFAASGLD---PDTLDPARVGVSLGSAVAAATSLER 116
Query: 139 AIEALR-------ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 191
L + ++ + ++ A +A +G GP +ST C + +
Sbjct: 117 EYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSV 176
Query: 192 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251
NA I G A+VM G +D + PI + F A RA + RN+DP ASRP+D RDGFV
Sbjct: 177 GNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFV 236
Query: 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 311
+ EGA + +LE+ + A RGA+I+AE G + +AYHMT DG + I AL S
Sbjct: 237 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 296
Query: 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEA 370
D++YINAH + T D E A G++ R V+S KSM+GH LGA G++E
Sbjct: 297 RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEI 356
Query: 371 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
A V A+ G + P NL D D + + +ER ++++ L+ GFGG S+++
Sbjct: 357 AACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRSVLTVGSGFGGFQSAMVLR 415
Query: 431 PY 432
Sbjct: 416 DA 417
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 547 bits (1412), Expect = 0.0
Identities = 131/418 (31%), Positives = 202/418 (48%), Gaps = 11/418 (2%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTS-FPTKIAAEIKSFST 77
KRVV+TGMG V+ LG D L G + + + +D T++AA + F+
Sbjct: 3 GSMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQ 62
Query: 78 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 137
K ++ M + +Y + A + ALAD G D + + GV GS G ++
Sbjct: 63 PADWPRKKTRSMGRVSMYAVRASELALADAGFAGD--ESISDGRMGVAYGSSSGSVEPIR 120
Query: 138 DAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 196
L + + + +++ G S+ACA+ + I A
Sbjct: 121 AFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYE 180
Query: 197 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256
+I G+ +ML GG++ + F A S RN++P RP+D RDG V+GEGA
Sbjct: 181 NIAMGKQTLMLAGGAEEL-SGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239
Query: 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
L+LEE EHAK RGA I+AE G SD HMT+P + ++ AL + +
Sbjct: 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTAS--TMARAMQLALEDAKLDAN 297
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
+ Y+NAH TST GD+ E QA FG+ + ++S KS +GH LGA GA+EA ++
Sbjct: 298 AIAYVNAHGTSTDRGDVAESQATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEM 355
Query: 377 IRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
++ W P +NL D A + + G + + + +SN+F FGG N+S+IF +
Sbjct: 356 MKRNWYAPTLNLTEVDPACAPLDYIRGEARAI-DAEYVMSNNFAFGGINTSLIFRRVR 412
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 547 bits (1412), Expect = 0.0
Identities = 168/431 (38%), Positives = 252/431 (58%), Gaps = 24/431 (5%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTS--------------FPTK 67
+RVVVTG+G+V+PLG + + L++G GI + D +K
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 68 IAAEIKSFSTDGWVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 124
+AA + S G L SK + F+ Y + A +AL D E +K + GV
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLP--TEEEEKERTGV 118
Query: 125 LIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTA 183
IG G+G + +A + + ++++PF +P NM S ++M G+ GPN++ TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178
Query: 184 CATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRP 242
CAT I +A I G+A+VM+ GG+++++ + + GF RALS + N P +ASRP
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238
Query: 243 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 302
+D +RDGFV+GEG+GV++LEE EHAK+RGAKIYAE G + DA+H+T+P DG G +L
Sbjct: 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVL 298
Query: 303 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGLRVNSTKSMIG 359
+ +AL SG+ ++Y+NAHATSTP GD E +A+ F + + L +STK G
Sbjct: 299 AMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATG 358
Query: 360 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419
HLLGAAGAVEAI + AI G +N++NPD + D + +++ V+ A+SNSFG
Sbjct: 359 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFG 418
Query: 420 FGGHNSSIIFS 430
FGG N+S++F+
Sbjct: 419 FGGTNASLLFA 429
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 546 bits (1410), Expect = 0.0
Identities = 141/432 (32%), Positives = 215/432 (49%), Gaps = 16/432 (3%)
Query: 5 VQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF 64
V + T VVVTG+ + + L + + + LL+ SGI ++ F
Sbjct: 15 VPRGSHMVT----GKAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEF 70
Query: 65 --PTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC 122
P +I + D + +RM ++ + G E D ++
Sbjct: 71 DLPVRIGGHLL-EEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSPEV-----DTNRL 124
Query: 123 GVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 181
V IG+GLG + + + +R K ++P V N +A + ++ +
Sbjct: 125 MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPV 184
Query: 182 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKAS 240
+ACA+ I A I+ GEA+ +CGG + + + + GF R +S N+DP A
Sbjct: 185 SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGAC 244
Query: 241 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 300
RP+D +RDGFV GEG +LL+E EHAK RGA I A G S TSD +HM P P+G
Sbjct: 245 RPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERA 304
Query: 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 360
I +A+ +G++ D++++NAHAT T GD+ E +A+ + G NR V + KS +GH
Sbjct: 305 GHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR-PAVYAPKSALGH 363
Query: 361 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 420
+GA GAVE+I V A+R I P +NL N D +D +V V + + A++NSFGF
Sbjct: 364 SVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDV-VAGEPRPGNYRYAINNSFGF 422
Query: 421 GGHNSSIIFSPY 432
GGHN +I F Y
Sbjct: 423 GGHNVAIAFGRY 434
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 535 bits (1382), Expect = 0.0
Identities = 101/416 (24%), Positives = 178/416 (42%), Gaps = 12/416 (2%)
Query: 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 78
K V++TG+G+V+P G +++ +L+G G+ + FD + +P +A +I F
Sbjct: 6 DDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAP 65
Query: 79 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 138
+ +L + D LTA AL D L GV+ + GG +
Sbjct: 66 DHIPGRLLPQTDPSTRLALTAADWALQDAKAD---PESLTDYDMGVVTANACGGFDFTHR 122
Query: 139 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
L K ++ + + + +++ G GP+ ++ A + +A
Sbjct: 123 EFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRT 182
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257
I RG +++ GG D+A+ P G +A +S DP +A P+D G+V GEG
Sbjct: 183 IRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTA-TDPDRAYLPFDERAAGYVPGEGGA 240
Query: 258 VLLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316
+L+LE+ A+ RG Y E G + T D + G+ I AL +G E
Sbjct: 241 ILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTGPE 297
Query: 317 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376
DV+ + A P D E +A+ FG G+ V K+ G L G ++ + + +
Sbjct: 298 DVDVVFADGAGVPELDAAEARAIGRVFG-REGVPVTVPKTTTGRLYSGGGPLDVVTALMS 356
Query: 377 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432
+R G I P + + ++++G + + AL + G G NS+ + +
Sbjct: 357 LREGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTALVLARGRWGFNSAAVLRRF 411
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 518 bits (1338), Expect = 0.0
Identities = 154/431 (35%), Positives = 227/431 (52%), Gaps = 13/431 (3%)
Query: 6 QPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFP 65
+ + + +RVVVTGMG+VS +G + +L E SGIS E + F
Sbjct: 7 HHMGTLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFR 66
Query: 66 TKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 125
++ + V + + + + A +A+AD G+TE+ E+ + G++
Sbjct: 67 CQVHG-APDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGII 122
Query: 126 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 184
+GSG + D+ + R K++ PF VP A ++ SA LA G NYSIS+AC
Sbjct: 123 MGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSAC 182
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 244
ATSN CI NA I G+ + M GG + + + S+ N+ P+ ASR +D
Sbjct: 183 ATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYD 242
Query: 245 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 304
NRDGFV+ GAGVL+LE+LE A RGAKIY E G TSD Y M P G G I C+
Sbjct: 243 KNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVA--PSGEGAIRCM 300
Query: 305 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 363
+ AL+ ++YIN HATSTPAGD E +A+ FG + +TKS+ GH LG
Sbjct: 301 KMALSTVT---SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLG 357
Query: 364 AAGAVEAIAVVQAIRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSFGFGG 422
A G EAI + ++ +I + ++E D A D +V + + +++ LSNSFGFGG
Sbjct: 358 ATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMP-IVRKRIDNVQLNTVLSNSFGFGG 416
Query: 423 HNSSIIFSPYK 433
N++++F Y+
Sbjct: 417 TNATLVFQRYQ 427
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 149/415 (35%), Positives = 224/415 (53%), Gaps = 14/415 (3%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K+ + M +Y + ++A+AD G++ + + + G++ GSG G + +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 142 ALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 199
A+R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRDGFVMGEGAGV 258
G+ +++ GG + + F A ALS + ND P KASR +D +RDGFV+ G G+
Sbjct: 179 LGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 259 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318
+++EELEHA RGA IYAE G TSD M P G G + C++ A+ +
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGVD---TPI 292
Query: 319 NYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378
+Y+N+H TSTP GD+KE A+ FG +++TK+M GH LGAAG EAI + +
Sbjct: 293 DYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLE 351
Query: 379 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
G+I P+IN+E D +V +R E+ +SNSFGFGG N++++ K
Sbjct: 352 HGFIAPSINIEELDEQAAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVMRKLK 405
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 386 bits (992), Expect = e-121
Identities = 77/462 (16%), Positives = 154/462 (33%), Gaps = 45/462 (9%)
Query: 3 VAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT 62
V V+ D E K + G + P+ ++ + G + +
Sbjct: 926 VIVEEDLEPFEASK---ETAEQFKHQHGDKVDIFEIPETG-EYSVKLLKGAT-LYIPKAL 980
Query: 63 SFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGKKALADGGIT--EDVMNELD 118
F +A +I + ++ + + ++D L++L + +A GIT ++ +
Sbjct: 981 RFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVH 1040
Query: 119 KSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178
S+ G GSG+GG+ + N M + + + + GP
Sbjct: 1041 VSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIK 1100
Query: 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND--- 235
+ ACATS + I+ G+A + + GG D G F +A S +
Sbjct: 1101 TPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEH 1159
Query: 236 ---PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE 292
P + SRP R+GF+ +GAG+ ++ + + A K G IY + +D +
Sbjct: 1160 GRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSV 1219
Query: 293 PHPDGVGVIL---------------------CIEKALAHSGVSR---EDVNYINAHATST 328
P P G G++ + + + ++ + A
Sbjct: 1220 PAP-GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEI 1278
Query: 329 PAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387
P+ D E+ N + + + G+ A G ++
Sbjct: 1279 PSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1338
Query: 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429
+ + T+ K E + + + G+ +F
Sbjct: 1339 VASFH---GTSTKANDKNESATINEMMKHLGRSEGNPVIGVF 1377
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 7e-65
Identities = 50/238 (21%), Positives = 81/238 (34%), Gaps = 13/238 (5%)
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259
+G S L R L R K ++ + E +
Sbjct: 1224 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ-IKDWVENEL---EALKLEAEEIP 1279
Query: 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319
++ E +R +I+ E + I + ALA G++ +D+
Sbjct: 1280 SEDQNEFLLERTREIHNEAES-QLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1338
Query: 320 YINAHATSTPAGDIKEYQALIHCFGQNRG-----LRVNSTKSMIGHLLGAAGAVEAIAVV 374
+ H TST A D E + + K + GH GAAGA +
Sbjct: 1339 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1398
Query: 375 QAIRTGWIHPNINLENPDAVVDT-NVLVGPKK--ERLEVKAALSNSFGFGGHNSSIIF 429
Q + +G I N N +N D +++ ++ P K + V+A SFGFG I
Sbjct: 1399 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1456
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 311 bits (799), Expect = 5e-95
Identities = 73/351 (20%), Positives = 127/351 (36%), Gaps = 24/351 (6%)
Query: 44 NNLLEGVSGISEIETFDCTSFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGK 101
+ G + + F +A +I + + + P + +++D LY+L +
Sbjct: 1137 QYTVRLRKGAT-LLIPKALQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVA 1195
Query: 102 KALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 159
+AL GIT + + S+ G IGSG+GG + +
Sbjct: 1196 EALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFV 1255
Query: 160 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSD-----AA 214
M + + + L GP + ACAT+ + + I++G+A V L GG D +
Sbjct: 1256 NTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS 1315
Query: 215 VIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKI 274
+G + R +P + SRP R+GF+ +G GV ++ + A + G I
Sbjct: 1316 YEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPI 1375
Query: 275 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY-----------INA 323
Y S +D + P P G GV+ + + D+ Y I
Sbjct: 1376 YGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQ 1434
Query: 324 HATSTPAGDIKEYQALIHCFGQNRG--LRVNSTKSMIGHLLGAAGAVEAIA 372
S +E A+ + G + H+ A EA A
Sbjct: 1435 WKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEA 1485
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 1e-45
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 11/183 (6%)
Query: 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV-GVILCIEKALAHSGV 313
+E + ++R I E R ++A I + ALA G+
Sbjct: 1455 SEEDGPFDETAYLRERTEHIEREARRQ--EAEAQTSFGNEFWRRDSRIAPLRGALATWGL 1512
Query: 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-----LRVNSTKSMIGHLLGAAGAV 368
+ +D+ + H TST A D E + + K + GH GAAGA
Sbjct: 1513 TIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAW 1572
Query: 369 EAIAVVQAIRTGWIHPNINLENPDAVVDT-NVLVGPKKE--RLEVKAALSNSFGFGGHNS 425
+Q + TG + N N +N D V++ + +V P + +KA SFGFG +
Sbjct: 1573 MLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGA 1632
Query: 426 SII 428
I
Sbjct: 1633 QAI 1635
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 1e-87
Identities = 65/377 (17%), Positives = 132/377 (35%), Gaps = 39/377 (10%)
Query: 44 NNLLEGVSGISEIETFDCTSFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGK 101
++ + G + + F +A +I + ++ + + ++D L++L +
Sbjct: 1162 EYSVKLLKGAT-LYIPKALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVV 1220
Query: 102 KALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 159
+A GIT ++ + S+ G GSG+GG+ + N
Sbjct: 1221 EAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFI 1280
Query: 160 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG 219
M + + + + GP + ACATS + I+ G+A + + GG D G
Sbjct: 1281 NTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEG 1339
Query: 220 LGGFVACRALSQRNND------PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 273
F +A S + P + SRP R+GF+ +GAG+ ++ + + A K G
Sbjct: 1340 SFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVP 1399
Query: 274 IYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR------------------ 315
IY + +D + P P G G++ + + +
Sbjct: 1400 IYGIVAMAATATDKIGRSVPAP-GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ 1458
Query: 316 ------EDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAV 368
++ + A P+ D E+ N + + + G+
Sbjct: 1459 IKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFY-KRDP 1517
Query: 369 EAIAVVQAIRTGWIHPN 385
+ A+ T + +
Sbjct: 1518 RIAPLRGALATYGLTID 1534
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 1e-49
Identities = 50/238 (21%), Positives = 82/238 (34%), Gaps = 13/238 (5%)
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259
+G S L R L R K ++ + E +
Sbjct: 1423 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ-IKDWVENEL---EALKLEAEEIP 1478
Query: 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319
++ E +R +I+ E + I + ALA G++ +D+
Sbjct: 1479 SEDQNEFLLERTREIHNEAES-QLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1537
Query: 320 YINAHATSTPAGDIKEYQALIHCFG-----QNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374
+ H TST A D E + + + K + GH GAAGA +
Sbjct: 1538 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1597
Query: 375 QAIRTGWIHPNINLENPDAVVDT-NVLVGPKK--ERLEVKAALSNSFGFGGHNSSIIF 429
Q + +G I N N +N D +++ ++ P K + V+A SFGFG I
Sbjct: 1598 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1655
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 4e-43
Identities = 87/335 (25%), Positives = 136/335 (40%), Gaps = 29/335 (8%)
Query: 103 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNM 162
A+ DGGI L + GV +G DA EAL + + + + M
Sbjct: 89 AIVDGGI---NPASLRGTSTGVWVGV------SSSDASEALSRDPETLVGYSMIGCQRAM 139
Query: 163 GSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG 222
+ L+ + GP+ +I TAC++S + +A I GE + + GG + + P
Sbjct: 140 MANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQ 199
Query: 223 FVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS 282
F+ LS R +D G+ E +LL + A++ +YA
Sbjct: 200 FMKLGMLS-----QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARR----VYATILNAG 250
Query: 283 FTSDAYH---MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 339
+D +T P G I A +G E + YI AH T T GD +E +
Sbjct: 251 TNTDGSKEQGVT--FPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGI 308
Query: 340 IHCFGQNR--GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP----DA 393
++ R L + STKS +GH A+G I V+ ++ G PN++ P A
Sbjct: 309 VNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPA 368
Query: 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
+ D + V + + NSFGFGG N +I
Sbjct: 369 LQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVI 403
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 8e-34
Identities = 86/291 (29%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 157 FATTNMGSAM---LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDA 213
T S +A LG GP ++ TAC++ + A + R E + L GG
Sbjct: 169 VGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTV 228
Query: 214 AVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 273
P F + L+ +P+ DGF + EGAGVL+L+ L A++ G
Sbjct: 229 MSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRP 283
Query: 274 IYAEFRGGSFTSDAYH--MTEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330
+ A RG + D +T P P VI +AL ++GV DV+Y+ AH T T
Sbjct: 284 VLAVLRGSAVNQDGASNGLTAPSGPAQQRVI---RRALENAGVRAGDVDYVEAHGTGTRL 340
Query: 331 GDIKEYQALIHCFGQNRG----LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386
GD E AL+ +G R L + S KS IGH AAG + V A+R G + +
Sbjct: 341 GDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTL 400
Query: 387 NLENPDAVVD---------TNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
+ + P ++ + P ER +A +S SFG G N+ +I
Sbjct: 401 HFDEPSPQIEWDLGAVSVVSQARSWPAGERPR-RAGVS-SFGISGTNAHVI 449
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-33
Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 29/291 (9%)
Query: 157 FATTNMGSAM---LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDA 213
T + ++ +G GP+ S+ TAC++S + A + +GE+++ + GG+
Sbjct: 147 SVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAV 206
Query: 214 AVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 273
P F RAL+ S+ + DGF EG ++LLE L A++ G +
Sbjct: 207 MATPGVFVDFSRQRALA-----ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHE 261
Query: 274 IYAEFRGGSFTSD--AYHMTEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330
+ A RG + D + ++ P P VI +AL G+ DV+ + AH T T
Sbjct: 262 VLAVVRGSALNQDGASNGLSAPSGPAQRRVI---RQALESCGLEPGDVDAVEAHGTGTAL 318
Query: 331 GDIKEYQALIHCFGQNRG----LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386
GD E AL+ +G++R L + S KS IGH AAG + VV A+R G + +
Sbjct: 319 GDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATL 378
Query: 387 NLENPDAVVD---------TNVLVGPKKERLEVKAALSNSFGFGGHNSSII 428
++E P VD + ER +AA+S +FG G N+ +I
Sbjct: 379 HVEEPTPHVDWSSGGVALLAGNQPWRRGERTR-RAAVS-AFGISGTNAHVI 427
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-31
Identities = 106/442 (23%), Positives = 171/442 (38%), Gaps = 79/442 (17%)
Query: 24 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISE---------------------IETFDCT 62
VV+ GM P F++NL+ GV +++ + FD +
Sbjct: 6 VVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDAS 65
Query: 63 SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC 122
F G V PK + MD + LL +A+ DGGI + L +
Sbjct: 66 FF--------------G-VHPKQAHTMDPQLRLLLEVTYEAIVDGGI---NPDSLRGTHT 107
Query: 123 GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM---LAMDLGWMGPNYS 179
GV +G + EAL + + + + M L+ + GP+ +
Sbjct: 108 GVWVGVS------GSETSEALSRDPETLVGY---SMVGCQRAMMANRLSFFFDFRGPSIA 158
Query: 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 239
+ TAC++S + NA I G+ + GG + + P F+ LS P
Sbjct: 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGT 213
Query: 240 SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH---MTEPHPD 296
+ +D +G+ EG +LL + A+ ++YA +D + +T P
Sbjct: 214 CKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPS-- 267
Query: 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR--GLRVNST 354
G I +GV+ E YI AH T T GD +E + R L + ST
Sbjct: 268 GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGST 327
Query: 355 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP----DAVVDTNVLVG----PKKE 406
KS +GH A+G V+ ++ G PN++ +P A++D + V P +
Sbjct: 328 KSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRG 387
Query: 407 RLEVKAALSNSFGFGGHNSSII 428
++ SFGFGG N II
Sbjct: 388 GN---VGIN-SFGFGGSNVHII 405
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 433 | |||
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.98 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.97 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.97 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.97 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.96 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.95 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.95 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.95 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.94 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.94 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.93 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.92 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.91 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.86 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.86 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.84 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.83 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.83 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.82 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.82 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.81 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.81 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.8 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.8 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.79 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.79 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.79 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.79 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.78 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.78 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.78 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.76 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.74 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.72 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.66 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.64 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.63 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.61 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.61 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.58 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.39 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 89.03 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 88.22 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 86.11 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 85.55 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 84.03 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 83.2 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 81.16 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 80.76 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 80.53 |
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-82 Score=628.98 Aligned_cols=422 Identities=44% Similarity=0.730 Sum_probs=383.9
Q ss_pred CCcccccCCCCCCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhh
Q 013946 7 PDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS 86 (433)
Q Consensus 7 ~~~~~~~~~~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~ 86 (433)
..++.+....+...+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++||+.+||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~ 82 (427)
T 3ho9_A 3 GSHHHHHHGSACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQ 82 (427)
T ss_dssp --------------CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHH
T ss_pred CcCCCccccCCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHH
Confidence 34555555666677789999999999999999999999999999999999999988888899999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHH
Q 013946 87 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 87 ~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
++|||+++|+++++++||+|||++++ +++..++||++|++.+++...++++..+ ..+...++|+.++....+..++
T Consensus 83 ~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (427)
T 3ho9_A 83 RKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAG 159 (427)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHH
Confidence 99999999999999999999999987 4567899999999999988887777665 4567788999999999999999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
+|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+.++..+..|...+.++..+..|+..|+|||.
T Consensus 160 ~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 239 (427)
T 3ho9_A 160 HLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDK 239 (427)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT
T ss_pred HHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccC
Confidence 99999999999999999999999999999999999999999999999998999999999999998777667788999999
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+||
T Consensus 240 ~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hg 319 (427)
T 3ho9_A 240 ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319 (427)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 326 TSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
|||+.+|..|..++.++|+.. .++++++.|+++||++||||++++++++++|++++|||++|+++|+|.++++++. .+
T Consensus 320 tgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~ 398 (427)
T 3ho9_A 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP-HE 398 (427)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCB-SS
T ss_pred CcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccc-cc
Confidence 999999999999999999864 4689999999999999999999999999999999999999999999999988654 34
Q ss_pred cccc-CccEEEEecccccceeeeeEEccC
Q 013946 405 KERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 405 ~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+++ +++++++|||||||+|+|+||++|
T Consensus 399 ~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 399 ARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp CEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 5666 789999999999999999999987
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-81 Score=620.17 Aligned_cols=405 Identities=32% Similarity=0.494 Sum_probs=377.8
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCC-CCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT-SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
.|++|+|||||+++|.|.+.++||++|++|++++++++.|+.. .++.++.+.+++||+.+|+++++.++|||+++|+++
T Consensus 4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 83 (412)
T 4ewg_A 4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR 83 (412)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence 3579999999999999999999999999999999999888766 677888899999999999999999999999999999
Q ss_pred HHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCC
Q 013946 99 AGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 176 (433)
Q Consensus 99 aa~~Al~dAgl-~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 176 (433)
++++||+|||+ +++ +++..++||++|++.+++...+++...+ ..+....+|+.++....+..+.++++.||++||
T Consensus 84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 160 (412)
T 4ewg_A 84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR 160 (412)
T ss_dssp HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence 99999999999 665 5567899999999999999888888776 456677889988999999999999999999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccce
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa 256 (433)
+++|+++|+|++.||..|+++|++|+||++||||+|. +++.....|...+.++....+|+..|||||.+++|+++||||
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGA 239 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeE
Confidence 9999999999999999999999999999999999999 889889999999999887777889999999999999999999
Q ss_pred eEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHH
Q 013946 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 336 (433)
Q Consensus 257 aalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~ 336 (433)
+++||+++++|+++|++||++|+|++.++|+++.+.| ++.++.+++++||+++|++++||||||+|||||+.+|..|.
T Consensus 240 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~ 317 (412)
T 4ewg_A 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAES 317 (412)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHH
T ss_pred EEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHH
Confidence 9999999999999999999999999999999887654 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccCccEEEE
Q 013946 337 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 337 ~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 415 (433)
++|.++|+.. +++++.|+++||++||||++++++++++|+++++||++|+++|+|.+ +++++. .+.++++++++++
T Consensus 318 ~al~~~~~~~--~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~-~~~~~~~~~~~~~ 394 (412)
T 4ewg_A 318 QATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIR-GEARAIDAEYVMS 394 (412)
T ss_dssp HHHHHHHCTT--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECC-SSCEECCCSEEEE
T ss_pred HHHHHHcCCC--CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccccc-CcccCCCCCEEEE
Confidence 9999999865 89999999999999999999999999999999999999999999999 777643 3566778999999
Q ss_pred ecccccceeeeeEEccCC
Q 013946 416 NSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~~ 433 (433)
|||||||+|+|+||++|+
T Consensus 395 ~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 395 NNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp EEEEGGGEEEEEEEECCC
T ss_pred eeecCCcceEEEEEeeCC
Confidence 999999999999999985
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-81 Score=621.03 Aligned_cols=411 Identities=45% Similarity=0.766 Sum_probs=381.0
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
+.|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|+++
T Consensus 4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 83 (416)
T 1e5m_A 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC 83 (416)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence 44578999999999999999999999999999999999999888888888899999999888999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++.+|+|||+|++.+++...++++..+ ..+...++|+.++....+..+.++++.||++||+
T Consensus 84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 160 (416)
T 1e5m_A 84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN 160 (416)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence 99999999999986 4567899999999999887777766555 4566778899888888999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|+||++||||+|..+++..+.+|..++.++.++++|+..|||||.+++|+++||||+
T Consensus 161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 99999999999999999999999999999999999888899889999999998777778889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||+++++|+++|++||++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++++||||||+|+|||+.+|.+|.+
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~ 320 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETR 320 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHH
Confidence 99999999999999999999999999999999888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.++++++. .+.++++++++++|
T Consensus 321 al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~ 399 (416)
T 1e5m_A 321 AIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSN 399 (416)
T ss_dssp HHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEE
T ss_pred HHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CccccCCCCEEEEc
Confidence 999999864 3589999999999999999999999999999999999999999999999888644 34667789999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 400 sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 400 SFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred cccCCCeeEEEEEEeCC
Confidence 99999999999999985
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-80 Score=616.08 Aligned_cols=410 Identities=42% Similarity=0.748 Sum_probs=383.6
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
|++++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++++||+.+|+++++.++|||+++|+++
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 80 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA 80 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence 45679999999999999999999999999999999999999888888888999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++..|+|||+|++.+++..++.++..+ ..+....+|+.++....+..+.++++.||++||+
T Consensus 81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 157 (413)
T 3o04_A 81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN 157 (413)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence 99999999999987 5567899999999999998888877766 4566778899999999999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...+.++. ..+|++.|+|||.+++|+++||||+
T Consensus 158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAa 236 (413)
T 3o04_A 158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAG 236 (413)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEE
T ss_pred eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEE
Confidence 999999999999999999999999999999999999999999999999999985 4457889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||++.++|+++|.++|++|+|++.++|+.+...+.|.+.++.++++++|+++|++++||||||+|||||+.+|..|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~ 316 (413)
T 3o04_A 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQ 316 (413)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .++++++.|+++||++||||++++++++++|+++++||++|+++|+|.+++++++. +.+..+++++++|
T Consensus 317 al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 395 (413)
T 3o04_A 317 AIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPN-EAREANVNVVISN 395 (413)
T ss_dssp HHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBS-SCEECCCCEEEEE
T ss_pred HHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCC-cccCCCCCEEEEe
Confidence 999999864 46899999999999999999999999999999999999999999999999886543 4566778999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 396 sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 396 SFGFGGHNATLVFKRIE 412 (413)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred CccCCceEEEEEEEeCC
Confidence 99999999999999984
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-80 Score=615.07 Aligned_cols=407 Identities=42% Similarity=0.735 Sum_probs=377.7
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|++++++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 107 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAR 107 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999888888888899999998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++.+|++||+|++.+++..+++.+..+ ..+...++|+.++....+..+.++++.||++||+++|
T Consensus 108 ~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v 184 (437)
T 2gqd_A 108 EAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGAT 184 (437)
T ss_dssp HHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEECB
T ss_pred HHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEEe
Confidence 99999999986 4567899999999999887777666555 4566778898888888899999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|+||++||||+|.++++..+.+|..++.++. +.+|+..|+|||.+++|+++||||+++|
T Consensus 185 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGaaavv 263 (437)
T 2gqd_A 185 VTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILV 263 (437)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEEEEEE
T ss_pred cCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceEEEEE
Confidence 999999999999999999999999999999999888998899999998876 3447889999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.++|+++|+++|++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++|+||||||+|+|||+.+|.+|.++|.
T Consensus 264 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~ 343 (437)
T 2gqd_A 264 IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIK 343 (437)
T ss_dssp EEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999888888889999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.++++++++++||||
T Consensus 344 ~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~sfG 422 (437)
T 2gqd_A 344 NTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP-NEAQDLDITYAMSNSLG 422 (437)
T ss_dssp HHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB-SSCEECCCSEEEEEEEC
T ss_pred HHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-CccccCCCCEEEEccCc
Confidence 999863 4689999999999999999999999999999999999999999999999988644 34667789999999999
Q ss_pred ccceeeeeEEccCC
Q 013946 420 FGGHNSSIIFSPYK 433 (433)
Q Consensus 420 ~gG~n~~~vl~~~~ 433 (433)
|||+|+|+||++|+
T Consensus 423 fGG~na~~vl~~~~ 436 (437)
T 2gqd_A 423 FGGHNAVLVFKKFE 436 (437)
T ss_dssp GGGEEEEEEEECCC
T ss_pred CCCeeEEEEEEecc
Confidence 99999999999984
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-80 Score=612.15 Aligned_cols=412 Identities=43% Similarity=0.708 Sum_probs=380.2
Q ss_pred CCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-------CCCCCCCCChhhhhcCC
Q 013946 18 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------SFSTDGWVAPKLSKRMD 90 (433)
Q Consensus 18 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~i~~~~~~~~~ 90 (433)
...+++|||||||+++|.|.++++||++|++|+++++++++|+...++..+++.++ +||+.+||++++.++||
T Consensus 6 ~~~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d 85 (428)
T 3kzu_A 6 HHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVD 85 (428)
T ss_dssp ---CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSC
T ss_pred cccccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCC
Confidence 44578999999999999999999999999999999999999998888888888887 79998889999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
|+++|+++++++||+|||+++++ .++..++||++|++.+++...+++...+ ..+...++|+.++....+..+++|++
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~--~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPEN--DEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI 163 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCS--HHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhh--hccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence 99999999999999999999863 0445789999999999988888777766 45667889999999999999999999
Q ss_pred HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCC
Q 013946 170 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRD 248 (433)
Q Consensus 170 ~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~ 248 (433)
.||++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...+.++.. ...|...|+|||.+++
T Consensus 164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 243 (428)
T 3kzu_A 164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRD 243 (428)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999865 3456678999999999
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 328 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt 328 (433)
|+++||||+++||++.++|+++|++||++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|||||
T Consensus 244 G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT 323 (428)
T 3kzu_A 244 GFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST 323 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS
T ss_pred ceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc
Confidence 99999999999999999999999999999999999999999988988999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccc
Q 013946 329 PAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 407 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 407 (433)
.+|..|.+++.++|+.. .++++++.|+++||++||+|++++++++++|+++++||++|+++|+|.++++++.. +.++
T Consensus 324 -~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~ 401 (428)
T 3kzu_A 324 -MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPH-KPRE 401 (428)
T ss_dssp -TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBS-SCEE
T ss_pred -hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCC-CCcC
Confidence 99999999999999864 36899999999999999999999999999999999999999999999999887543 4566
Q ss_pred cCccEEEEecccccceeeeeEEccCC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++++++++|||||||+|+|+||++|+
T Consensus 402 ~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 402 RKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCEEEEeCcccChhhEEEEEeecC
Confidence 78999999999999999999999984
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-80 Score=613.38 Aligned_cols=405 Identities=47% Similarity=0.800 Sum_probs=378.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+++ +||+.+++++++.++|||+++|++++++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAAQ 80 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998888888888888 8998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++..++||++|++.+++..+++++..+ ..+...++|+.++....+..+.++++.||++||+++|
T Consensus 81 ~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v 157 (408)
T 1j3n_A 81 LALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157 (408)
T ss_dssp HHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred HHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence 99999999987 4556899999999999888777766655 4566778898888888999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.++..|+..|+|||.+++|+++||||+++|
T Consensus 158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaavv 237 (408)
T 1j3n_A 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237 (408)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEEE
Confidence 99999999999999999999999999999999988999999999999999777777889999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|+|||+.+|.+|.+++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~ 317 (408)
T 1j3n_A 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIK 317 (408)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred EeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 99999999999999999999999999999888888999999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.++++++. +.++++++++++||||
T Consensus 318 ~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~--~~~~~~~~~a~~~sfG 395 (408)
T 1j3n_A 318 RVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFA 395 (408)
T ss_dssp HHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEEC
T ss_pred HHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC--CCcCCCCCEEEEeccc
Confidence 999753 4689999999999999999999999999999999999999999999999988754 5677789999999999
Q ss_pred ccceeeeeEEccC
Q 013946 420 FGGHNSSIIFSPY 432 (433)
Q Consensus 420 ~gG~n~~~vl~~~ 432 (433)
|||+|+|+||++|
T Consensus 396 fGG~na~~vl~~~ 408 (408)
T 1j3n_A 396 FGGHNAVLAFKRV 408 (408)
T ss_dssp TTSEEEEEEEECC
T ss_pred CCcceEEEEEecC
Confidence 9999999999986
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-79 Score=612.24 Aligned_cols=407 Identities=39% Similarity=0.637 Sum_probs=374.8
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccC------CCCCCCCChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~------~~~~~~i~~~~~~~~~~~~~ 94 (433)
.++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++ ||+.+|+++++.++|||+++
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 368999999999999999999999999999999999988877788888888877 99888899999999999999
Q ss_pred HHHHHHHHHHHhCCCCc-ccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 95 YLLTAGKKALADGGITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
|+++++++||+|||+++ ++ ++..++||++|++.+++..+++++..+ ..+...++|+.++....+..+.++++.||
T Consensus 100 l~l~aa~~AL~dAGl~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWHPQSE---ADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHTCCCCSH---HHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCccc---ccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 99999999999999987 63 345789999999999888777776665 45567788888888888999999999999
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccc
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 252 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ 252 (433)
++||+++|+++|+|++.||..|+++|++|+||++||||+|.+++|..+..|..++.++.. .+|+..|+|||.+++|+++
T Consensus 177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSBCB
T ss_pred CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCEEe
Confidence 999999999999999999999999999999999999999988889888899999988754 3477899999999999999
Q ss_pred ccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC
Q 013946 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332 (433)
Q Consensus 253 geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D 332 (433)
||||+++||+++++|+++|++||++|+|++.++|+.+.+.|.+++.++.++|++||+++|++++||||||+|+|||+.+|
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD 335 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGD 335 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccC
Confidence 99999999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccC--
Q 013946 333 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-- 409 (433)
Q Consensus 333 ~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~-- 409 (433)
.+|.++|.++|+.. .+++|+++|+++||+++|||++++++++++|+++.+||++|+++|+|.++++++. .+.++|+
T Consensus 336 ~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~ 414 (438)
T 2iwz_A 336 AAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP-LKAQEWKTE 414 (438)
T ss_dssp HHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB-SSCEECCCS
T ss_pred HHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCcccCCCC
Confidence 99999999999864 3689999999999999999999999999999999999999999999999988644 3456666
Q ss_pred -ccEEEEecccccceeeeeEEccC
Q 013946 410 -VKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 410 -~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++++++|||||||+|+|+||++|
T Consensus 415 ~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 415 KRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SSCEEEEEEEETTTEEEEEEEECC
T ss_pred CccEEEEecCcCCCeeEEEEEeeC
Confidence 89999999999999999999986
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-79 Score=607.02 Aligned_cols=408 Identities=44% Similarity=0.704 Sum_probs=377.4
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
|+|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|+++
T Consensus 20 m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~ 99 (430)
T 1ox0_A 20 MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALY 99 (430)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHH
T ss_pred ccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHHH
Confidence 44678999999999999999999999999999999999999888888888899999998878999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++..++||++|++.+++....+++..+ ..+.+.++|+.++....+..+.+|++.||++||+
T Consensus 100 aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~ 176 (430)
T 1ox0_A 100 AAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVC 176 (430)
T ss_dssp HHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCce
Confidence 99999999999886 4567899999999999887777666555 4566788899999999999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.++. .++|+..|+|||.+++|+++||||+
T Consensus 177 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~geGAa 255 (430)
T 1ox0_A 177 KSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVMGEGSG 255 (430)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCBCCEEE
T ss_pred EeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccccceEE
Confidence 999999999999999999999999999999999999888988888988888875 3447889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||+++++|+++|++||++|+|++.++|+.+.+.|.+++.++.++|+++|+++|++++||||||+|+|||+.+|..|..
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 335 (430)
T 1ox0_A 256 MLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESG 335 (430)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEec
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 417 (433)
++.++|+. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.++++++++++||
T Consensus 336 al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~s 412 (430)
T 1ox0_A 336 AIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISNT 412 (430)
T ss_dssp HHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEEE
T ss_pred HHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCcCCCCCEEEEeC
Confidence 99999986 489999999999999999999999999999999999999999999999887643 345566789999999
Q ss_pred ccccceeeeeEEccCC
Q 013946 418 FGFGGHNSSIIFSPYK 433 (433)
Q Consensus 418 ~g~gG~n~~~vl~~~~ 433 (433)
|||||+|+|+||++|.
T Consensus 413 fGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 413 FGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EETTTEEEEEEEECCC
T ss_pred ccCCCceEEEEEeecC
Confidence 9999999999999984
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-79 Score=609.75 Aligned_cols=410 Identities=38% Similarity=0.582 Sum_probs=364.5
Q ss_pred cCCCCCCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHH
Q 013946 13 TKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 13 ~~~~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 92 (433)
......+.+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+. .+||+.+|+++++.++||++
T Consensus 14 ~~~~~~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~ 92 (428)
T 3mqd_A 14 AQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRG 92 (428)
T ss_dssp --------CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHH
T ss_pred cCCCCCCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHH
Confidence 33344566789999999999999999999999999999999999887777777777777 47988888999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
++|+++++++||+|||++++ +++..++|||+|++.+++...+++...+ ..+...++|+.++....+..+.++++.|
T Consensus 93 ~~l~~~aa~~Al~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 169 (428)
T 3mqd_A 93 TAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFF 169 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCHH---HHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCChh---HccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHc
Confidence 99999999999999999987 4557899999999988888777777665 4567788999999999999999999999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~ 250 (433)
|++||+++|+++|+|++.||..|+++|++|+||++||||+|. +++.....|..++.++.. ...|++.|+|||.+++|+
T Consensus 170 gl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~ 248 (428)
T 3mqd_A 170 KIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGF 248 (428)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSB
T ss_pred CCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCCCc
Confidence 999999999999999999999999999999999999999999 455556668888888765 456788999999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++||||+++||+++++|+++|++||++|+|++.++|+.+++.| ++.++.+++++||+ |++ +||||||+|||||+.
T Consensus 249 v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~ 323 (428)
T 3mqd_A 249 VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYINPHATSTPA 323 (428)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHH
T ss_pred ccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999887655 78899999999999 999 999999999999999
Q ss_pred CCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCccccc
Q 013946 331 GDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERL 408 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~ 408 (433)
+|.+|..+|.++|+.. ..+++++.|+++||++||||++++++++++|++++|||++|+++|+|.++ ++++. ...+..
T Consensus 324 ~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~-~~~~~~ 402 (428)
T 3mqd_A 324 GDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR-KRIDNV 402 (428)
T ss_dssp HHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS-SCEESC
T ss_pred cCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC-CccccC
Confidence 9999999999999842 24789999999999999999999999999999999999999999999986 66543 223335
Q ss_pred CccEEEEecccccceeeeeEEccCC
Q 013946 409 EVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 409 ~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
+++++++|||||||+|+|+||++|+
T Consensus 403 ~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 403 QLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp CCCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCEEEEecCcCCcceEEEEEeecC
Confidence 6899999999999999999999985
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-79 Score=605.44 Aligned_cols=399 Identities=37% Similarity=0.620 Sum_probs=363.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.++++ ||+.+|+++++.++|||+++|++++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 6899999999999999999999999999999999988877777778888898 999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCC-CeeEEEEeccCCchHHHHHHHHHHH--hhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 102 KALADGGITEDVMNELDK-SKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~-~~~gv~~g~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
+||+|||++++ +++. +|+|||+|++.+++...++++..+. .+...++|+.++....+..+.++++.||++||++
T Consensus 81 ~Al~dAg~~~~---~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 157 (406)
T 2vba_A 81 QAIADAGLSPE---AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (406)
T ss_dssp HHHHHHTCCHH---HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHCCCChh---HcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCcee
Confidence 99999999876 4555 8999999999999888877776653 4455678888888889999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhc-CCCCCCCCCccccCCCCCccccccee
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ-RNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
+|+++|+|++.||..|+++|++|+||++||||+|.++.+..+. |..++.++. ++++|+..|+|||.+++|+++|||++
T Consensus 158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaa 236 (406)
T 2vba_A 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (406)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeeceEE
Confidence 9999999999999999999999999999999999988887777 888888875 34457789999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++|||++++|+++|++||++|+|++.++|+.+++. |++.++.++|++||+++| +||||||+|||||+.+|.+|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~--p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~ 311 (406)
T 2vba_A 237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELA 311 (406)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTS--CCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCC--CCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHH
Confidence 99999999999999999999999999999987764 458899999999999999 8999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .+++++.|+++||+++|||++++++++++|+++.+||++|+++|+|.++ ++++.. ..+. ++|++++|
T Consensus 312 al~~~fg~~-~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~-~~~~-~~~~a~~~ 388 (406)
T 2vba_A 312 AIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTE-TTDR-ELTTVMSN 388 (406)
T ss_dssp HHHHHHTTC-CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCS-CEEC-CCCEEEEE
T ss_pred HHHHHhCcC-CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCc-ccCC-CCCEEEEc
Confidence 999999865 3889999999999999999999999999999999999999999999998 766433 2333 78999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 389 sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 389 SFGFGGTNATLVMRKLK 405 (406)
T ss_dssp EEETTTEEEEEEEECC-
T ss_pred CCCCCCeEEEEEEEeCC
Confidence 99999999999999984
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-78 Score=601.17 Aligned_cols=406 Identities=33% Similarity=0.527 Sum_probs=373.4
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
...++|+|||||+++|.|.+.++||++|++|+++++++++|+ ...++.++++.+++ |+.+|+++++.++|||+++|+
T Consensus 25 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~ 103 (434)
T 2gp6_A 25 KAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMS 103 (434)
T ss_dssp TTSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHH
T ss_pred CCCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHH
Confidence 344689999999999999999999999999999999998876 45667778888877 777779999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCC
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 175 (433)
++++++||+|||++ +++.++++||+|++.+++...++++..+ ..+...++|+.++....+..+.+|++.||++|
T Consensus 104 l~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~G 178 (434)
T 2gp6_A 104 TVLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKA 178 (434)
T ss_dssp HHHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCC
Confidence 99999999999993 5667899999999999988877777666 34556788888888889999999999999999
Q ss_pred CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhh-hhhcCCCCCCCCCccccCCCCCccccc
Q 013946 176 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 176 p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~-~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
|+++|+++|+|++.||..|+++|++|++|++||||+|....+..+..|..++ .++..+..|++.|+|||.+++|+++||
T Consensus 179 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gd 258 (434)
T 2gp6_A 179 GVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGE 258 (434)
T ss_dssp CEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBC
T ss_pred CeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceec
Confidence 9999999999999999999999999999999999999988888888898888 777666668889999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 334 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~ 334 (433)
||+++||++.+.|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|+|+|+.+|.+
T Consensus 259 GAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~ 338 (434)
T 2gp6_A 259 GGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLA 338 (434)
T ss_dssp CEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHH
Confidence 99999999999999999999999999999999999888888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEE
Q 013946 335 EYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414 (433)
Q Consensus 335 E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (433)
|.++|.++|+.. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++|+++
T Consensus 339 E~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~ 416 (434)
T 2gp6_A 339 EGRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA-GEPRPGNYRYAI 416 (434)
T ss_dssp HHHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECC-SSCCCSCCCEEE
T ss_pred HHHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCccCCCCCEEE
Confidence 999999999865 689999999999999999999999999999999999999999999999887644 345667899999
Q ss_pred EecccccceeeeeEEccC
Q 013946 415 SNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 415 ~~s~g~gG~n~~~vl~~~ 432 (433)
+|||||||+|+|+||++|
T Consensus 417 ~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 417 NNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EeCCcCCCeeEEEEEEeC
Confidence 999999999999999987
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-79 Score=605.19 Aligned_cols=404 Identities=25% Similarity=0.401 Sum_probs=372.6
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
..++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++||+.+|+++++.++|||+++|++++
T Consensus 7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a 86 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA 86 (415)
T ss_dssp ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence 34689999999999999999999999999999999999988878888888999999988789999999999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
+++||+|||++++ +++..++|||+|++.+++...++++..+ ..+...++|+.++....+..+.++++.||++||++
T Consensus 87 a~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 163 (415)
T 1tqy_B 87 ADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS 163 (415)
T ss_dssp HHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence 9999999999987 4557899999999999998888777766 45667789998888889999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
+|+++|+|++.||..|+++|++| ||++||||+|..+++..+..|..++.++. +++|+..|+|||.+++|+++||||++
T Consensus 164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGaaa 241 (415)
T 1tqy_B 164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGGAI 241 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEEEE
T ss_pred eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999 99999999999889999999999999886 44577899999999999999999999
Q ss_pred EEecchHHHHhcCC-eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 259 LLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 259 lvL~~~~~A~~~g~-~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
+||+++++|+++|+ ++|++|+|++.++|+.+.+.|.+ ++.++|+++|+++|++++||||||+|||||+.+|.+|..
T Consensus 242 vvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 318 (415)
T 1tqy_B 242 LVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEAR 318 (415)
T ss_dssp EEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred EEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHH
Confidence 99999999999999 99999999999999998777665 788999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEec
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 417 (433)
++.++|+.. .+++++.|+++||++||||++++++++++|+++.+||++|+++|+|.++++++. .+.+++.++++++||
T Consensus 319 al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~s 396 (415)
T 1tqy_B 319 AIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL-GEPRSTAPRTALVLA 396 (415)
T ss_dssp HHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECB-SSCBCCCCSEEEEEE
T ss_pred HHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCccCCCCEEEEec
Confidence 999999865 489999999999999999999999999999999999999999999999887643 456777899999999
Q ss_pred ccccceeeeeEEccCC
Q 013946 418 FGFGGHNSSIIFSPYK 433 (433)
Q Consensus 418 ~g~gG~n~~~vl~~~~ 433 (433)
|||||+|+|+||++|.
T Consensus 397 fGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 397 RGRWGFNSAAVLRRFA 412 (415)
T ss_dssp EETTTEEEEEEEEEC-
T ss_pred CcCCCeEEEEEEecCC
Confidence 9999999999999873
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-79 Score=609.86 Aligned_cols=406 Identities=33% Similarity=0.512 Sum_probs=371.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCC-CChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-i~~~~~~~~~~~~~l~l~aa 100 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++ +||+.+| +++++.++|||+++|+++++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa 81 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA 81 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence 589999999999999999999999999999999999998888888888888 8998887 99999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHH---hhcccCCCCcccccccchHHH----HHHHHhCC
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR---ISYKKMNPFCVPFATTNMGSA----MLAMDLGW 173 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~----~ia~~lgl 173 (433)
++||+|||++++ +++..|+|||+|++.+++...++++..+. .+....+|+.++...++..+. ++++.||+
T Consensus 82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl 158 (424)
T 1tqy_A 82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA 158 (424)
T ss_dssp HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence 999999999986 45678999999999998887777766653 344556666666555554455 99999999
Q ss_pred CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccc
Q 013946 174 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 253 (433)
Q Consensus 174 ~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~g 253 (433)
+||+++|+++|+|++.||..|+++|++|+||++||||+|.++++..+..|..++.++.++.+|+..|||||.+++|+++|
T Consensus 159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 238 (424)
T 1tqy_A 159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLA 238 (424)
T ss_dssp CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEE
T ss_pred CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeee
Confidence 99999999999999999999999999999999999999998889988999999999877777889999999999999999
Q ss_pred cceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 254 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 254 eGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
||++++||++.++|+++|++||++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++++||||||+|+|||+.+|.
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~ 318 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDR 318 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCH
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccE
Q 013946 334 KEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412 (433)
Q Consensus 334 ~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (433)
+|.++|.++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++++
T Consensus 319 ~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~ 397 (424)
T 1tqy_A 319 HETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP-LEARERKLRS 397 (424)
T ss_dssp HHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCB-SSCEECCCSE
T ss_pred HHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCC-CcccCCCCCE
Confidence 9999999999864 3588999999999999999999999999999999999999999999999887644 3466778999
Q ss_pred EEEecccccceeeeeEEccC
Q 013946 413 ALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 413 ~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++|||||||+|+|+||++|
T Consensus 398 a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 398 VLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp EEEEEEETTTEEEEEEEECH
T ss_pred EEEccccCCceEEEEEEccC
Confidence 99999999999999999986
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-78 Score=600.61 Aligned_cols=405 Identities=33% Similarity=0.550 Sum_probs=371.6
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
..+++|+|||||+++|.|.+.++||++|++|+++++++++|+ ...++.++++.+++ |+.+|+++++.++|||+++|+
T Consensus 9 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~ 87 (416)
T 2wge_A 9 GGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMG 87 (416)
T ss_dssp TSSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHH
T ss_pred CCCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHH
Confidence 345689999999999999999999999999999999998876 44567778888887 777779999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCC
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 175 (433)
++++++||+|||++ +++.+++|||+|++.+++...++++..+ ..+...++|+.++....+..+.+|++.||++|
T Consensus 88 l~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 162 (416)
T 2wge_A 88 KLLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARA 162 (416)
T ss_dssp HHHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCC
Confidence 99999999999992 5567899999999999888777776655 45667788988888889999999999999999
Q ss_pred CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccc
Q 013946 176 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 255 (433)
Q Consensus 176 p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geG 255 (433)
|+++|+++|+|++.||..|+++|++|++|++||||+|.+..+..+..|...+.++.++.+|+..|+|||.+++|+++|||
T Consensus 163 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geG 242 (416)
T 2wge_A 163 GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEA 242 (416)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCE
T ss_pred CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCc
Confidence 99999999999999999999999999999999999999888888888999999987777788999999999999999999
Q ss_pred eeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHH
Q 013946 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 335 (433)
Q Consensus 256 aaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E 335 (433)
++++||++.++|+++|.++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|||||+.+|.+|
T Consensus 243 aaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E 322 (416)
T 2wge_A 243 GALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAE 322 (416)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHH
T ss_pred eEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHH
Confidence 99999999999999999999999999999999988888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEE
Q 013946 336 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 336 ~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (433)
..++..+ +.. ++++++.|+++||++||+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++|++++
T Consensus 323 ~~al~~~-~~~-~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~ 399 (416)
T 2wge_A 323 ANAIRVA-GCD-QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA-GEPRYGDYRYAVN 399 (416)
T ss_dssp HHHHHHT-TCT-TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECC-SSCEECCCCEEEE
T ss_pred HHHHHHh-ccC-CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-CCCccCCCCEEEE
Confidence 9999988 543 589999999999999999999999999999999999999999999999887644 3445567899999
Q ss_pred ecccccceeeeeEEccC
Q 013946 416 NSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~ 432 (433)
|||||||+|+|+||++|
T Consensus 400 ~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 400 NSFGFGGHNVALAFGRY 416 (416)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred eCcccCceeEEEEEEeC
Confidence 99999999999999987
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-79 Score=608.38 Aligned_cols=410 Identities=40% Similarity=0.665 Sum_probs=378.5
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc--------CCCCCCCCChhhhhcCCHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK--------SFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~~~i~~~~~~~~~~~ 92 (433)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.++ +||+.+|+++++.+.|||+
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 102 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF 102 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence 47899999999999999999999999999999999988877777778888887 7998888999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
++|+++++++||+|||++++++. +..++||++|++.+++...++++..+ ..+...++|+.++....+..+.++++.|
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~~~i~--d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAPEAEQ--QRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSHH--HHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhhcc--cccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 99999999999999999987440 46789999999999998888887766 4566778999999999999999999999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~ 250 (433)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.+..+..+..|...++++.. ..+|...|+|||.+++|+
T Consensus 181 gl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g~ 260 (451)
T 4ddo_A 181 RFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGF 260 (451)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSB
T ss_pred cCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999988865 445667899999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++||||+++||++.++|+++|.+|+++|+|++.++|+.+...+.+++.++.++++++|+++|++++||||||+|+|||+.
T Consensus 261 v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 340 (451)
T 4ddo_A 261 VMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPV 340 (451)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcc
Confidence 99999999999999999999999999999999999999988888889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccC
Q 013946 331 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLE 409 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~ 409 (433)
+|.+|..++.++|+...++++++.|+++||++||||++++++++++|+++++||++|+++|+|.+ +++++ ..+.++++
T Consensus 341 ~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 419 (451)
T 4ddo_A 341 GDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI-GPAARHVP 419 (451)
T ss_dssp HHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEEC-CSSCEECC
T ss_pred cCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccccccc-CCCCCCCC
Confidence 99999999999998755789999999999999999999999999999999999999999999998 66664 34456678
Q ss_pred ccEEEEecccccceeeeeEEccCC
Q 013946 410 VKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 410 ~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++++++|||||||+|+|+||++|.
T Consensus 420 ~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 420 VEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp CSEEEEEEEETTTEEEEEEEEESC
T ss_pred cCEEEEeeEcCCCceEEEEEeeCC
Confidence 999999999999999999999973
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=597.98 Aligned_cols=404 Identities=41% Similarity=0.705 Sum_probs=364.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCC--------------CCCCcccccccc------CCCCCCCC
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTDGWV 81 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--------------~~~~~~~~~~i~------~~~~~~~i 81 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+. ..++.++++.++ +||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 3799999999999999999999999999999999987762 234556677776 68876667
Q ss_pred ChhhhhcCCHHHHHHHHHHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccc
Q 013946 82 APKLSKRMDKFMLYLLTAGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFAT 159 (433)
Q Consensus 82 ~~~~~~~~~~~~~l~l~aa~~Al~dAgl-~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 159 (433)
+++ +|||+++|+++++++||+|||+ ++++ ++..++|||+|++.+++..+++++..+ ..+.+.++|+.++...
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 154 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTEE---EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL 154 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCSH---HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCccc---cCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence 765 8999999999999999999999 8763 445789999999999888777766655 3455678888888888
Q ss_pred cchHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCC
Q 013946 160 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTK 238 (433)
Q Consensus 160 ~~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~ 238 (433)
.+..+.++++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|.++++..+..|..++.++.. +.+|+.
T Consensus 155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 234 (431)
T 2ix4_A 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQE 234 (431)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGG
T ss_pred hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccc
Confidence 8999999999999999999999999999999999999999999999999999998888888889888888753 456788
Q ss_pred CCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 013946 239 ASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 239 ~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dI 318 (433)
.|+|||.+++|+++||||+++||++.++|+++|+++|++|+|++.++|+.+++.|.+++.++.++++++|+++|++++||
T Consensus 235 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 314 (431)
T 2ix4_A 235 ASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQI 314 (431)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcCC---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||+|||||+.+|.+|.+++.++|+.. .++++++.|+++||+++|||++++++++++|+++.+||++|+++|+|.+
T Consensus 315 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 394 (431)
T 2ix4_A 315 DYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIF 394 (431)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTC
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 9999999999999999999999999742 3689999999999999999999999999999999999999999999999
Q ss_pred CCccccCCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 396 DTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 396 ~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++++. .+.+++ .+|++++|||||||+|+|+||++|
T Consensus 395 ~~~~v~-~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 395 DKRFMP-LTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CSSSCC-CSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccCC-ccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 888644 345566 789999999999999999999987
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-74 Score=621.50 Aligned_cols=394 Identities=26% Similarity=0.411 Sum_probs=351.0
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCC-CCCCCC-Cccccc---cccCCCCCCC-CChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCTSF-PTKIAA---EIKSFSTDGW-VAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~-~~~~~~-~~~~~~---~i~~~~~~~~-i~~~~~~~~~~~~~ 94 (433)
+++|+||||||++|+|.++++||++|.+|++.+++.++ |+...+ .....+ .+..||+.+| |++++++.|||+++
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 57999999999999999999999999999999998754 332211 112233 3445999988 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
|+++++++||+|||++++ +++..++|||+|++.+++. ..+......++++.+++...+..+++|++.||++
T Consensus 83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~d~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 153 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGSETS------EALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR 153 (965)
T ss_dssp HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCCHHH------HHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccchhHH------HHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence 999999999999999987 5668999999998765432 2333445566777777788899999999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
||+++|+++|+|++.||++|+++|++|+||++||||+|.+++|..+..|...+.++ |++.|+|||.+++|+++||
T Consensus 154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBBC
T ss_pred CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998 7789999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
|++++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++||++|+||||||+|||||+.||+
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~ 304 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDP 304 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHH
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCH
Confidence 99999999999885 48999999999999976 45667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC----ccccCCcccc
Q 013946 334 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT----NVLVGPKKER 407 (433)
Q Consensus 334 ~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~----~~~~~~~~~~ 407 (433)
+|.++|.++|+.. .+++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++. ++.+..+.++
T Consensus 305 ~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~ 384 (965)
T 3hhd_A 305 QELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLP 384 (965)
T ss_dssp HHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEE
T ss_pred HHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCcc
Confidence 9999999999753 368999999999999999999999999999999999999999999999862 3455566778
Q ss_pred cCccEEEEecccccceeeeeEEccC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|+.+++++|||||||+|+|+||+++
T Consensus 385 ~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 385 VRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp CCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCeEEEecccCCCceEEEEeccC
Confidence 8888999999999999999999986
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-73 Score=657.52 Aligned_cols=394 Identities=25% Similarity=0.386 Sum_probs=352.3
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCC-CCCCCCC-ccccccc---cCCCCCCC-CChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCTSFP-TKIAAEI---KSFSTDGW-VAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~-~~~~~~i---~~~~~~~~-i~~~~~~~~~~~~~ 94 (433)
|++|+||||||++|+|.++++||++|.+|++++++.++ |+...+. ....+.+ ..||+.+| |++++++.|||++|
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 36899999999999999999999999999999998743 4433221 2233444 45999988 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
|+++++++||+|||++++ .++++++|||+|++.+++. ..+..+....+++.+++...++.+++|++.|||+
T Consensus 81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDAS------EALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHHH------HHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHHH------HHHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 999999999999999986 6778999999999875442 2223344567778888889999999999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.++++|+ |++.|||||.++||+++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999998 7789999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
|++++|||++++|. +||++|+|+++++||++ ...+.|++.++.++|++||++||++|+||+|||+|||||+.||+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999985 59999999999999974 45567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-C---ccccCCcccc
Q 013946 334 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-T---NVLVGPKKER 407 (433)
Q Consensus 334 ~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~---~~~~~~~~~~ 407 (433)
+|++||.++|+.. .+++|+|+|+|+||+++|||++++||++++|++|.|||++|+++|+|.++ + ++.+..+.++
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~ 382 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLP 382 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCB
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCcc
Confidence 9999999999853 36899999999999999999999999999999999999999999999986 3 3445556777
Q ss_pred cCccEEEEecccccceeeeeEEccC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|+.+++++|||||||+|+|+||+++
T Consensus 383 ~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 383 IRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCeEEEeccCCCCceeEEEEccC
Confidence 8878999999999999999999976
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=604.56 Aligned_cols=397 Identities=26% Similarity=0.396 Sum_probs=349.0
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCC---CCCCCCCcccccccc---CCCCCCC-CChhhhhcCCHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET---FDCTSFPTKIAAEIK---SFSTDGW-VAPKLSKRMDKF 92 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~i~---~~~~~~~-i~~~~~~~~~~~ 92 (433)
.++|+||||||++|+| .++++||++|++|++++++++. |+. ....+.++.++ .||+.+| |++++.+.|||+
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~ 116 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ 116 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHH
Confidence 3689999999999987 7899999999999999998743 322 22245566665 5888887 999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
++|+++++++||+|||++++ +++..++|||+|++..++... .......++++.++....+..+.+|++.||
T Consensus 117 ~rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~------~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 187 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPR------PDEAPDEVLGYVGTGTASSVASGRVAYCLG 187 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCC------TTSSCGGGGGGHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhh------hhcCccccCcccccccccchHHHHHHHhcC
Confidence 99999999999999999987 566789999999986544211 011223345555566677889999999999
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccc
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 252 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ 252 (433)
++||+++|+++|+|++.||++|+++|++|+||++||||+|.+..+..+..|...+.++ |++.|+|||.+++|+++
T Consensus 188 l~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~~ 262 (917)
T 2hg4_A 188 LEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGL 262 (917)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBCB
T ss_pred CCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCCC
Confidence 9999999999999999999999999999999999999999998888888888888887 67899999999999999
Q ss_pred ccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC
Q 013946 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332 (433)
Q Consensus 253 geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D 332 (433)
|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|+++|++|+||||||+|||||+.+|
T Consensus 263 gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD 342 (917)
T 2hg4_A 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGD 342 (917)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHH
T ss_pred cceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCc
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc---cccCCcc
Q 013946 333 IKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN---VLVGPKK 405 (433)
Q Consensus 333 ~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~---~~~~~~~ 405 (433)
++|.++|.++|+.. .+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++ +.+..+.
T Consensus 343 ~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~ 422 (917)
T 2hg4_A 343 PIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQA 422 (917)
T ss_dssp HHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSC
T ss_pred HHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCc
Confidence 99999999999752 3688999999999999999999999999999999999999999999999763 3333444
Q ss_pred ccc----CccEEEEecccccceeeeeEEccC
Q 013946 406 ERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 406 ~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++| .+|++++|||||||+|+|+||+++
T Consensus 423 ~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 423 RSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp EECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 544 368999999999999999999986
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-72 Score=601.57 Aligned_cols=397 Identities=26% Similarity=0.416 Sum_probs=349.4
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCC---CCCCCC-----------Ccccccccc---CCCCCCC-C
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET---FDCTSF-----------PTKIAAEIK---SFSTDGW-V 81 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~---~~~~~~-----------~~~~~~~i~---~~~~~~~-i 81 (433)
.++|+||||||++|+| .++++||++|.+|++.+++++. |+...+ ..+.++.++ .||..+| |
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 4689999999999999 8999999999999999988743 432111 123455554 4888877 9
Q ss_pred ChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccc
Q 013946 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTN 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (433)
++++.+.|||+++|+++++++||+|||++++ +++..++|||+|++.+++.... .....++++.++....+
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~~ 154 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAPA 154 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhh-------ccccccccccccccccc
Confidence 9999999999999999999999999999987 5667899999999876553211 11234566666777788
Q ss_pred hHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCc
Q 013946 162 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 241 (433)
Q Consensus 162 ~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 241 (433)
..+++|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+++|..+..|...+.++ +++.|+
T Consensus 155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~~ 229 (915)
T 2qo3_A 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRSK 229 (915)
T ss_dssp HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCcc
Confidence 899999999999999999999999999999999999999999999999999999999888898888887 678899
Q ss_pred cccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 242 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 242 pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|+++|++|+|||||
T Consensus 230 ~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~v 309 (915)
T 2qo3_A 230 AFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAV 309 (915)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred cccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
|+|||||+.+|++|..+|.++|+.. .+++++++|+++||+++|||++++++++++|+++.|||++|+++|+|.+++
T Consensus 310 e~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~ 389 (915)
T 2qo3_A 310 EAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDW 389 (915)
T ss_dssp ECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCC
T ss_pred EecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Confidence 9999999999999999999999853 368899999999999999999999999999999999999999999999876
Q ss_pred c---cccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 398 N---VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 398 ~---~~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. +.+..+.++| .+|++++|||||||+|+|+||+++
T Consensus 390 ~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 390 SSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp SSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 3 3333333333 478999999999999999999986
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-63 Score=550.69 Aligned_cols=398 Identities=25% Similarity=0.310 Sum_probs=341.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~a 99 (433)
.+|+|++ ..+.++||++|++|++.+.+.. ..++..++|+|+ +||+.+| |++++.++|||+++|++++
T Consensus 1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1218 (1887)
T 2uv8_A 1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVS 1218 (1887)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHH
T ss_pred CceeEee-------cCchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHH
Confidence 4566654 3457899999999999998852 245677889997 7999999 9999999999999999999
Q ss_pred HHHHHHhCCCC-cccc-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH-hCCCCC
Q 013946 100 GKKALADGGIT-EDVM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-LGWMGP 176 (433)
Q Consensus 100 a~~Al~dAgl~-~~~~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp 176 (433)
+++||+|||++ |.++ ..++..++||++|++.+++......+..... ...+.++.++....|..++++++. ||++||
T Consensus 1219 a~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP 1297 (1887)
T 2uv8_A 1219 VVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGP 1297 (1887)
T ss_dssp HHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTT-TCCCCTTHHHHHSTTHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHh-cCCCCcchhhcchhhHHHHHHHHHHcCCccc
Confidence 99999999995 6532 1267789999999999998776655443211 123566667777889999999995 999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC------CCCCCCCCccccCCCCCc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~~pfd~~~~G~ 250 (433)
+++++++|+|++.||+.|+++|++|+||++||||+|. +++..+..|..++.++.. +.+|++.|||||.+++||
T Consensus 1298 ~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gf 1376 (1887)
T 2uv8_A 1298 IKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGF 1376 (1887)
T ss_dssp CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSB
T ss_pred eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCc
Confidence 9999999999999999999999999999999999998 678888889999988742 456889999999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC------------------hH--------------
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV-------------- 298 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~-------------- 298 (433)
++|||++++||++.++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1377 v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~ 1456 (1887)
T 2uv8_A 1377 MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTRE 1456 (1887)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHH
T ss_pred ccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876555442 10
Q ss_pred -----------------------------HH-------------------------------HHHHHHHHHHcCCCCCCc
Q 013946 299 -----------------------------GV-------------------------------ILCIEKALAHSGVSREDV 318 (433)
Q Consensus 299 -----------------------------~~-------------------------------~~ai~~al~~agl~~~dI 318 (433)
.+ .++|++||+++||+++||
T Consensus 1457 ~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DI 1536 (1887)
T 2uv8_A 1457 AQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDL 1536 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGE
T ss_pred HHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHc
Confidence 12 368999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcC-----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~-----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
||||+|||||+.||++|.++|.++|+. ..++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|
T Consensus 1537 d~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp 1616 (1887)
T 2uv8_A 1537 GVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDK 1616 (1887)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCG
T ss_pred eEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCC
Confidence 999999999999999999999999963 135899999999999999999999999999999999999999999999
Q ss_pred CCC-Cccc-cCCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 394 VVD-TNVL-VGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 394 ~~~-~~~~-~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.++ ++++ +..+.++| .+|++++|||||||+|+|+|++++
T Consensus 1617 ~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1617 ILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp GGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 984 5543 23344455 689999999999999999999875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-64 Score=550.01 Aligned_cols=391 Identities=27% Similarity=0.323 Sum_probs=338.8
Q ss_pred CCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCC-cc
Q 013946 36 GHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGIT-ED 112 (433)
Q Consensus 36 g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~-~~ 112 (433)
..+.++||+.|.+|++.+.+. ...++..++|+|+ +||+.+| |++++.++|||+++|+++++++||++||++ |.
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~----~~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~ 1207 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPK----ALQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPY 1207 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEE----EECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSGG
T ss_pred CCChHHHHHHHHcCCCeeeec----CCCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCChh
Confidence 356689999999999999874 2345667889997 7999888 999999999999999999999999999998 65
Q ss_pred cc-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHH
Q 013946 113 VM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFC 190 (433)
Q Consensus 113 ~~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~A 190 (433)
++ ..++..++|+++|++.+++......+..... ...+.++.++....|..++++++ .||++||+++++++|+|++.|
T Consensus 1208 e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~A 1286 (1878)
T 2uv9_A 1208 EFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYL-DKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVES 1286 (1878)
T ss_dssp GHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTT-TCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHH
T ss_pred hhhcccCccceEEEEccCCccHHHHHHHHHHHHh-cCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHH
Confidence 32 1267899999999999998776655443211 12367777888889999999999 599999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhc------CCCCCCCCCccccCCCCCcccccceeEEEecch
Q 013946 191 ILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ------RNNDPTKASRPWDINRDGFVMGEGAGVLLLEEL 264 (433)
Q Consensus 191 l~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~ 264 (433)
|+.|++.|++|+||++||||+|. +++..+..|..++.++. .+.+|++.|||||.+++||++|||++++||++.
T Consensus 1287 l~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~ 1365 (1878)
T 2uv9_A 1287 LDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTA 1365 (1878)
T ss_dssp HHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEH
T ss_pred HHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeH
Confidence 99999999999999999999998 67888888999998874 255688999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC-h----------------------------------------------
Q 013946 265 EHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD-G---------------------------------------------- 297 (433)
Q Consensus 265 ~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~-~---------------------------------------------- 297 (433)
+.|+++|++||++|+|+++++|+.+...|.|. +
T Consensus 1366 ~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~ 1445 (1878)
T 2uv9_A 1366 QLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQE 1445 (1878)
T ss_dssp HHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 99999999999999999999999876655551 0
Q ss_pred --------------------HHHH-------------------------------HHHHHHHHHcCCCCCCccEEEeccC
Q 013946 298 --------------------VGVI-------------------------------LCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 298 --------------------~~~~-------------------------------~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
..+. ++|++||+++||+++||||||+|||
T Consensus 1446 ~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGT 1525 (1878)
T 2uv9_A 1446 EVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGT 1525 (1878)
T ss_dssp HHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCC
T ss_pred HHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCC
Confidence 0122 7899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcC--C---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-Cccc
Q 013946 327 STPAGDIKEYQALIHCFGQ--N---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVL 400 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~--~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~ 400 (433)
||+.||++|.++|.++|+. . .++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|.++ ++++
T Consensus 1526 gT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v 1605 (1878)
T 2uv9_A 1526 STVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYI 1605 (1878)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTE
T ss_pred CCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCcccccccc
Confidence 9999999999999999974 1 35899999999999999999999999999999999999999999999984 5543
Q ss_pred c-CCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 401 V-GPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~-~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. ..+..++ .+|++++|||||||+|+|+|++++
T Consensus 1606 ~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1606 VYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp ECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 2 2233333 589999999999999999999874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-66 Score=548.99 Aligned_cols=390 Identities=25% Similarity=0.317 Sum_probs=334.7
Q ss_pred CCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCC-ccc
Q 013946 37 HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGIT-EDV 113 (433)
Q Consensus 37 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~-~~~ 113 (433)
.+.++||++|.+|++.+.+. ...++..++|+++ +||+.+| |++++.++|||+++|+++++++||++||++ |.+
T Consensus 959 ~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~e 1034 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYE 1034 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGG
T ss_pred CCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHH
Confidence 35689999999999999873 3345667889997 7999999 999999999999999999999999999998 653
Q ss_pred c-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHHH
Q 013946 114 M-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFCI 191 (433)
Q Consensus 114 ~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~Al 191 (433)
+ ..++..++|+++|++.+++......+..... ...++++.++....|..++++++ .||++||+++|+++|+|++.||
T Consensus 1035 i~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~-~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL 1113 (1688)
T 2pff_A 1035 MYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1113 (1688)
T ss_dssp GGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS-CCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHH
T ss_pred hccccCCceEEEEecccCCCHHHHHHHHHHHHh-cCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHH
Confidence 2 1267899999999999988766655443211 12356677777788999999999 7999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC------CCCCCCCCccccCCCCCcccccceeEEEecchH
Q 013946 192 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEGAGVLLLEELE 265 (433)
Q Consensus 192 ~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~ 265 (433)
..|+++|++|+||++||||+|. +++..+..|..++.++.. +.+|++.|||||.+++|+++||||+++||++.+
T Consensus 1114 ~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1114 DIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp HHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSH
T ss_pred HHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHH
Confidence 9999999999999999999998 577777778888888743 445889999999999999999999999999999
Q ss_pred HHHhcCCeEEEEEEEeeeccCCCCCCCCCCC------------------hH-----------------------------
Q 013946 266 HAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV----------------------------- 298 (433)
Q Consensus 266 ~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~----------------------------- 298 (433)
.|+++|++||++|+|+++++|+.+.+.|.|. +.
T Consensus 1193 ~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~ 1272 (1688)
T 2pff_A 1193 LALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALK 1272 (1688)
T ss_dssp HHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999998765433331 00
Q ss_pred --------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 299 --------------GV-------------------------------ILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 299 --------------~~-------------------------------~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
.+ .++|++||+++|++++||||||+|||||++||+
T Consensus 1273 ~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~ 1352 (1688)
T 2pff_A 1273 LEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDK 1352 (1688)
T ss_dssp HHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSST
T ss_pred HHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccH
Confidence 12 368999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC-----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-Cccc-cCCccc
Q 013946 334 KEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVL-VGPKKE 406 (433)
Q Consensus 334 ~E~~al~~~~~~-----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~-~~~~~~ 406 (433)
+|.++|.++|+. ..++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|.++ ++++ ...+.+
T Consensus 1353 iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~ 1432 (1688)
T 2pff_A 1353 NESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTL 1432 (1688)
T ss_dssp TTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCC
T ss_pred HHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccc
Confidence 999999999974 135899999999999999999999999999999999999999999999985 4433 233444
Q ss_pred cc-CccEEEEecccccceeeeeEEccC
Q 013946 407 RL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 407 ~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+| .+|++++|||||||+|+|+|+++.
T Consensus 1433 ~~~~~r~AlVnSFGFGGtNAhvILe~p 1459 (1688)
T 2pff_A 1433 KTDGVRAVSITSFGFGQKGGQAIVVHP 1459 (1688)
T ss_dssp SSSSSSCCCCCCCCSTTCCCCCCEECS
T ss_pred cCCCCcEEEEeeECCCCeeEEEEEeCC
Confidence 55 689999999999999999999875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-61 Score=556.09 Aligned_cols=367 Identities=26% Similarity=0.365 Sum_probs=321.9
Q ss_pred CCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCCccccc-ccCCCeeEEEEeccCCchHHHHHHH
Q 013946 64 FPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAI 140 (433)
Q Consensus 64 ~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~ 140 (433)
++.+++++++ +||+.+| |++++++.|||+++|+++++++||+|||+++++++ .++..++|||+|++.|++...++.+
T Consensus 2617 ~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~ 2696 (3089)
T 3zen_D 2617 LSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMY 2696 (3089)
T ss_dssp CSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHH
T ss_pred ccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHH
Confidence 4556788884 7999998 99999999999999999999999999999998663 3477899999999999988777766
Q ss_pred HHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh
Q 013946 141 EALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG 219 (433)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~ 219 (433)
..+..+....++ .++....|..+++++. +||++||+++|+++|+||+.||+.|+++|++|+||++||||+|. +++..
T Consensus 2697 ~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~ 2774 (3089)
T 3zen_D 2697 HGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEA 2774 (3089)
T ss_dssp HHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHH
T ss_pred HHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHH
Confidence 655433333333 3566677888999986 45999999999999999999999999999999999999999999 78888
Q ss_pred hHHHHHhhhhh------cCCCCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCC
Q 013946 220 LGGFVACRALS------QRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 293 (433)
Q Consensus 220 ~~~~~~~~~ls------~~~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~ 293 (433)
+..|..++.++ ..+.+|++.|||||.+++|+++|||++++||++.++|+++|++||++|.+.+.++|+.+...+
T Consensus 2775 ~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~ 2854 (3089)
T 3zen_D 2775 IIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIP 2854 (3089)
T ss_dssp HHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSS
T ss_pred HHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCcc
Confidence 88898888765 345678999999999999999999999999999999999999999999999999999988877
Q ss_pred CCCh-------HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH---HHHHHHcCC--CCcccccchhhhhhH
Q 013946 294 HPDG-------VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ---ALIHCFGQN--RGLRVNSTKSMIGHL 361 (433)
Q Consensus 294 ~~~~-------~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~---al~~~~~~~--~~~~v~s~k~~~Gh~ 361 (433)
.|.. .++.++|++||+++|++++||||||+|||||++||++|.. ++.++|+.. .++++++.|+++||+
T Consensus 2855 aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~ 2934 (3089)
T 3zen_D 2855 APGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHA 2934 (3089)
T ss_dssp CCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBC
T ss_pred CCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCc
Confidence 7752 3566799999999999999999999999999999999999 778889864 368999999999999
Q ss_pred hhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC--ccccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 362 LGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT--NVLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 362 ~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+||||++++++++++|+++.|||++|+++|+|.++. ++.+..+.++| ++|++++|||||||+|+|+||+++
T Consensus 2935 ~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~ 3011 (3089)
T 3zen_D 2935 KGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHP 3011 (3089)
T ss_dssp STTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECG
T ss_pred hhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecC
Confidence 999999999999999999999999999999999872 34444444444 479999999999999999999986
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=302.45 Aligned_cols=271 Identities=17% Similarity=0.233 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..+|+++++++||+|| |++++++| +|++|+..+... ..+..+.+++..
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTLE------------------------QGWNIARMASLM 78 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence 4679999999999999 99998777 899998653210 124578899999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhh------------------HHHHHhhh-
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL------------------GGFVACRA- 228 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~------------------~~~~~~~~- 228 (433)
||+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |... .++...+.
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999997532 2210 11111111
Q ss_pred ----hhcC----------------------CCC--C------CCCCccccCC---------------------CCCcc--
Q 013946 229 ----LSQR----------------------NND--P------TKASRPWDIN---------------------RDGFV-- 251 (433)
Q Consensus 229 ----ls~~----------------------~~~--~------~~~~~pfd~~---------------------~~G~~-- 251 (433)
+++. .+. | .+.++|||.+ ++|++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 1110 000 1 1123789988 79999
Q ss_pred -----cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 252 -----MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 252 -----~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
++|||+++||++++.|+++|.+++++|+|++.+++. |.+.+.+...+++++|+++|++++||||||+|++
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 999999999999999999999999999999988643 3444567789999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 327 STPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
++ .|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 f~-----~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------- 366 (390)
T 1wdk_C 314 FA-----AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------- 366 (390)
T ss_dssp BH-----HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CH-----HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------
Confidence 87 4677777888753 2578999999999999999999999999999973
Q ss_pred CcccccCccEEEEecccccceeeeeEEcc
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+++++++.+.||.+.++||++
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ------CCCEEEEEecccchheEEEEEEe
Confidence 23577887777889999999986
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=298.20 Aligned_cols=269 Identities=19% Similarity=0.254 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
.+|+++++++||+|||++++++| ++++|+..+.. .....+.+++..+|
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~ia~~lg 78 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS-------EVIFGHVLAAG-------------------------CGQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCCHHHHHHHHHcC
Confidence 67999999999999999998776 79999865321 02346889999999
Q ss_pred C--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------hHH---------H--H
Q 013946 173 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGG---------F--V 224 (433)
Q Consensus 173 l--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~~~---------~--~ 224 (433)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. +.. | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 7999999999999999999999999999999999999997642 210 000 0 0
Q ss_pred Hhhhhhc-----CC-------------------------------------------CCCCC------------CCcc-c
Q 013946 225 ACRALSQ-----RN-------------------------------------------NDPTK------------ASRP-W 243 (433)
Q Consensus 225 ~~~~ls~-----~~-------------------------------------------~~~~~------------~~~p-f 243 (433)
.++.+++ ++ .+++. .+|| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 1111110 00 00121 4889 9
Q ss_pred cCCCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 244 DINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 244 d~~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|.+++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|.+.+.+...+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999998863 3444566788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||||+|...+ ....++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~d~f~-----~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--------------- 373 (397)
T 1wl4_A 314 DVDIFEINEAFA-----AVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--------------- 373 (397)
T ss_dssp GCCEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HCCEEEEecccH-----HHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc---------------
Confidence 999999886544 2335577888754 3688999999999999999999999999999883
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++++..+.||.+.++||++
T Consensus 374 -------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -------------CCCEEEEEEecccchheEEEEEe
Confidence 23688888777789999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=299.36 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+..++.. ..+..+.+++..+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~va~~l 74 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAGE------------------------DNRNVARMALLLA 74 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSST------------------------TTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC------------------------CCChHHHHHHHHh
Confidence 357999999999999999998777 899998653210 1245688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------h----------HHHH
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------L----------GGFV 224 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~----------~~~~ 224 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. + .++.
T Consensus 75 Gl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 154 (401)
T 1ulq_A 75 GFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM 154 (401)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHH
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 7899999999999999999999999999999999999997543 220 0 1121
Q ss_pred --H-----hhhh---------------------h-----------cCC----------------CCCCC-----------
Q 013946 225 --A-----CRAL---------------------S-----------QRN----------------NDPTK----------- 238 (433)
Q Consensus 225 --~-----~~~l---------------------s-----------~~~----------------~~~~~----------- 238 (433)
. ++.. + ... .++++
T Consensus 155 p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 155 QALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHH
T ss_pred ccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHH
Confidence 0 1110 0 000 00111
Q ss_pred -CCcc-ccCCCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHH
Q 013946 239 -ASRP-WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 309 (433)
Q Consensus 239 -~~~p-fd~~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~ 309 (433)
.+|| ||. +|++ ++|||+++||++++.|+++|.+++++|+|++.+++.. .+.+.+...++++||+
T Consensus 235 ~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~ 307 (401)
T 1ulq_A 235 AALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP-----RIMGIGPVPATRKALE 307 (401)
T ss_dssp HHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHH
T ss_pred hhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc-----cccchhHHHHHHHHHH
Confidence 3466 774 5776 7999999999999999999999999999999987642 2234567899999999
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC---CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~---~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
++|++++||||||+|++++. .|+..++. |+- ..++++++.+..+||++||+|+.++++++++|+++
T Consensus 308 ~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------ 376 (401)
T 1ulq_A 308 RAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------ 376 (401)
T ss_dssp HTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------
T ss_pred HcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc------
Confidence 99999999999999998885 56666654 452 24678889999999999999999999999999984
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++++++++||.|+++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 257899999999999999999875
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=295.23 Aligned_cols=272 Identities=17% Similarity=0.249 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+..++.. ..+..+.+++..+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-------~vi~g~~~~~~~------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-------DIVVGTVLAPGS------------------------QRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECCSSBHH------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccC------------------------CCChHHHHHHHHc
Confidence 357899999999999999998776 799998754321 1234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh---------hhH-HHH-----Hh-------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---------GLG-GFV-----AC------- 226 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~---------~~~-~~~-----~~------- 226 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. .+. ++. .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7899999999999999999999999999999999999997543 11 000 110 00
Q ss_pred ----------------------------hhhhcCC-------------------CCCCC------------CCcc-ccCC
Q 013946 227 ----------------------------RALSQRN-------------------NDPTK------------ASRP-WDIN 246 (433)
Q Consensus 227 ----------------------------~~ls~~~-------------------~~~~~------------~~~p-fd~~ 246 (433)
+.+.... .+.++ .+|| ||.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 1111000 00111 3456 764
Q ss_pred CCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 247 RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 247 ~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+|++ ++|||+++||++++.|+++|.+++++|+|++.+.+. |.+.+.+...+++++|+++|++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 5776 699999999999999999999999999999998762 333456778999999999999999999
Q ss_pred EEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc
Q 013946 320 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 398 (433)
Q Consensus 320 ~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 398 (433)
|||+|+++|. .|+.+++ .|+-. .++++++.+..+||++||+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~----~~l~~~~-~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~-------------- 395 (442)
T 2wu9_A 337 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG--K-------------- 395 (442)
T ss_dssp EEEECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC--T--------------
T ss_pred EEEEeCCChH----HHHHHHH-HhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC--C--------------
Confidence 9999999996 6887775 45532 35777788888999999999999999999999853 0
Q ss_pred cccCCcccccCccEEEE-ecccccceeeeeEEccCC
Q 013946 399 VLVGPKKERLEVKAALS-NSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~l~-~s~g~gG~n~~~vl~~~~ 433 (433)
+.+++++ +++| ||.|+++||++++
T Consensus 396 ----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 ----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp ----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred ----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 3468884 6688 9999999999863
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=292.01 Aligned_cols=268 Identities=21% Similarity=0.274 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|+|+++++++ ++++|+..+.. .....+.+++..+
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~~-------------------------~~~~~a~~ia~~l 74 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-------EVILGQVLPAG-------------------------EGQNPARQAAMKA 74 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCcHHHHHHHHHc
Confidence 467999999999999999998776 78888764311 1234688999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------hHHH-----------
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGGF----------- 223 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~~~~----------- 223 (433)
|++ +|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. +..+
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 899999999999999999999999999999999999997533 210 0000
Q ss_pred HHhhhhh-----cCCCC-----------------------------CC-----CCCccccCC------------------
Q 013946 224 VACRALS-----QRNND-----------------------------PT-----KASRPWDIN------------------ 246 (433)
Q Consensus 224 ~~~~~ls-----~~~~~-----------------------------~~-----~~~~pfd~~------------------ 246 (433)
..++.++ +++.+ |. ..|+|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 0011110 00000 10 126889887
Q ss_pred --CCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 247 --RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 247 --~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|.+.+.+...+++++|+++|++++|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 78999 99999999999999999999999999999998764 23444567789999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHH--HHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQA--LIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~a--l~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
|||||+|. ..|..+ +.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 310 Id~ie~~d-------~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~-------------- 368 (392)
T 2vu1_A 310 LDLVEANE-------AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR-------------- 368 (392)
T ss_dssp CSEEEECC-------SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEecc-------ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc--------------
Confidence 99999884 445555 46777753 3688999999999999999999999999999873
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++...-||.+.++||++
T Consensus 369 --------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 --------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEecccchheEEEEEe
Confidence 23577776554488999999986
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=283.93 Aligned_cols=270 Identities=16% Similarity=0.212 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+...+. ..+..+..++..+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~~a~~l 102 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-------DICVGNVLQPG-------------------------AGAIMARIAQFLS 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCcc-------------------------ccccHHHHHHHHc
Confidence 477999999999999999998777 79999865322 1134566788899
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh---------h------------HHHHH---
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------L------------GGFVA--- 225 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~---------~------------~~~~~--- 225 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... + .++..
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 7899999999999999999999999999999999999997643110 0 11100
Q ss_pred ---------------------------hhhhhcCC------------------CCCCCCCcc-------------ccCCC
Q 013946 226 ---------------------------CRALSQRN------------------NDPTKASRP-------------WDINR 247 (433)
Q Consensus 226 ---------------------------~~~ls~~~------------------~~~~~~~~p-------------fd~~~ 247 (433)
.+.+.... .+++..+|| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 01111100 113567888 99875
Q ss_pred -----CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 013946 248 -----DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 322 (433)
Q Consensus 248 -----~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~ 322 (433)
+|+.++|||+++||++++.|+++|.+|+++|+|++.+.. .|.+.+.+...++++||+++|++++||||||
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999988753 2333456778899999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHcCCCCcccccch--hhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 323 AHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK--SMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 323 ~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k--~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
+|++++ .+|..|.++|.. . +.+++..+ .++||++||+|+.++++++++|+++
T Consensus 338 ~h~af~-~~~~~~~~~lg~--~---~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~-------------------- 391 (418)
T 2iik_A 338 INEAFA-SQAAYCVEKLRL--P---PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR-------------------- 391 (418)
T ss_dssp ECCSBH-HHHHHHHHHHTC--C---GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred eeccch-HHHHHHHHHcCC--C---ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--------------------
Confidence 998665 678888888742 1 23566555 5789999999999999999999871
Q ss_pred cCCcccccCcc-EEEEecccccceeeeeEEccC
Q 013946 401 VGPKKERLEVK-AALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~~~~~~~~~~~-~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..+ +++++..+.||...++||+++
T Consensus 392 --------~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 392 --------GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp --------TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------CCCeeeEEEEeeccchhheEEEecc
Confidence 113 677787888899999999875
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=281.32 Aligned_cols=268 Identities=15% Similarity=0.205 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhCC----CCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHH
Q 013946 92 FMLYLLTAGKKALADGG----ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 167 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAg----l~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 167 (433)
..+|+++++++||+||| ++++++| +|++|+..++. ..+..+.++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~v 82 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNVG-------------------------AGATEHRAA 82 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHH
Confidence 35789999999999999 9998776 79999865321 134568899
Q ss_pred HHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh-----------h--HHH-----HHh
Q 013946 168 AMDLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG-----------L--GGF-----VAC 226 (433)
Q Consensus 168 a~~lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~-----------~--~~~-----~~~ 226 (433)
+..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. + .++ ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7899999999999999999999999999999999999997433 110 0 000 001
Q ss_pred hhh-----hcCC----------------------------------------CCCCC------------CCcc-ccCCCC
Q 013946 227 RAL-----SQRN----------------------------------------NDPTK------------ASRP-WDINRD 248 (433)
Q Consensus 227 ~~l-----s~~~----------------------------------------~~~~~------------~~~p-fd~~~~ 248 (433)
+.+ .+++ .++++ .+|| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 111 0000 01222 2456 87654
Q ss_pred Ccc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 249 GFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 249 G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
|++ ++|||+++||++++.|+++|.+++++|+|++.+++. |.+.+.+...+++++|+++|++++|||||
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 666 799999999999999999999999999999998773 33345577899999999999999999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
|+|+++|. .|...++. |+-. .++++++.+..+||++||+|+.++++++++|+++-
T Consensus 317 e~h~~ft~----~~l~~~~~-lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------- 372 (393)
T 1afw_A 317 EINEAFAA----QALYCIHK-LGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------- 372 (393)
T ss_dssp EECCSBHH----HHHHHHHH-HTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC-------------------
T ss_pred EEeccCHH----HHHHHHHH-hCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC-------------------
Confidence 99999995 67776644 5532 35778888889999999999999999999998720
Q ss_pred cCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 401 VGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. +++...+-||...++||+++
T Consensus 373 -------~----gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 -------I----GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp -------E----EEEEEEETTTEEEEEEEEEC
T ss_pred -------C----cEEEEeecccceEEEEEEeC
Confidence 0 34444444677788888864
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=277.76 Aligned_cols=270 Identities=22% Similarity=0.314 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| +|++|+.... ......+.+++..+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~l 78 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-------ESLLGGVLTA-------------------------GLGQNIARQIALGA 78 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCC-------------------------CCCchHHHHHHHHc
Confidence 367999999999999999999888 8999986421 11234688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+......
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 47999999999999999999999999999999999999975431100
Q ss_pred ---HHHHH------------------------------hhhhhcC-------------CCCCCCCCcc------------
Q 013946 221 ---GGFVA------------------------------CRALSQR-------------NNDPTKASRP------------ 242 (433)
Q Consensus 221 ---~~~~~------------------------------~~~ls~~-------------~~~~~~~~~p------------ 242 (433)
.++.. .+.+... ..+++..+|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 00000 0000000 0123333332
Q ss_pred -ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 243 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 243 -fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|+. ..++..++||++++||++++.|++++.+++++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHH
Confidence 432 25677889999999999999999999999999999998765 3444556788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||||+|++++ .|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ve~~d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 373 (396)
T 4dd5_A 314 DIDLVEANEAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--------------- 373 (396)
T ss_dssp GCSEEEECCSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HcCEEEecChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 999999997754 6888888888754 4688999999999999999999999999999872
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++..+.||+..++||++
T Consensus 374 -------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 -------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp -------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------------CCCeEEEEEcccCCceeEEEEeC
Confidence 24789999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=277.06 Aligned_cols=271 Identities=20% Similarity=0.299 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| ++++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~i~~~l 76 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQR-------------------------TDEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCC-------------------------GGGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCC-------------------------CccchHHHHHHHHc
Confidence 357999999999999999999888 8999986421 11234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 47999999999999999999999999999999999999875432110
Q ss_pred --HHHHHh------------------------------hhhhcC-------------CCCCCCCCcc-------------
Q 013946 221 --GGFVAC------------------------------RALSQR-------------NNDPTKASRP------------- 242 (433)
Q Consensus 221 --~~~~~~------------------------------~~ls~~-------------~~~~~~~~~p------------- 242 (433)
.++... +.+... ..+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 000000 000000 0134455554
Q ss_pred ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 243 WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 243 fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
|+. ..++..++||++++||++.+.|++++.+++++|+|++.++. .|.+.+.++..+++++|+++|++++|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 653 25778899999999999999999999999999999998753 34444556889999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
|||||+|++.+ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 Id~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------- 370 (394)
T 3ss6_A 312 ADLLEINEAFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------- 370 (394)
T ss_dssp CSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------
T ss_pred cCEEEeCCchH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999997654 7888999998854 3688999999999999999999999999999872
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++++..+.||...++||++.
T Consensus 371 ------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 ------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 246788888888899999999863
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=277.64 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| ++++|+..+. ...+..+.+++..+
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~-------------------------~~~~~~a~~va~~l 79 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-------EAYMGNVLQG-------------------------GEGQAPTRQAVLGA 79 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCchHHHHHHHHc
Confidence 367999999999999999998776 7888875421 11234688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------hHH--------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGG-------- 222 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------~~~-------- 222 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... +..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 7999999999999999999999999999999999999997433111 000
Q ss_pred ---------HHHhhhhhcC----------------------C-----------------CCCCCCCcc--ccC-------
Q 013946 223 ---------FVACRALSQR----------------------N-----------------NDPTKASRP--WDI------- 245 (433)
Q Consensus 223 ---------~~~~~~ls~~----------------------~-----------------~~~~~~~~p--fd~------- 245 (433)
+...+ +++. . .+.++.+++ ||.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0000 0 001112222 554
Q ss_pred --CCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 246 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 246 --~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
+++|++ ++|||+++||++++.|+++|.+++++|+|++.+. ..|.+.+.++..+++++|+++|++++
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 568999 9999999999999999999999999999999764 22333456788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHH--HcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHC--FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~--~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
||||||+| |..|..+|..+ |+.. .++++++.|.++||++||+|+.++++++++|++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 99999976 55667777666 7643 368899999999999999999999999999975
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=274.58 Aligned_cols=272 Identities=18% Similarity=0.216 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..+|+++++++||+|+ |+++++|| ++++|+..... ......+.+++..
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~------------------------~~~~~~a~~~~~~ 75 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTL------------------------EQGFNIARNAALL 75 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSB------------------------TTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCc------------------------ccccHHHHHHHHH
Confidence 5679999999999999 99999888 89999864211 0023457789999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-------------------HHHHH----
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL-------------------GGFVA---- 225 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~-------------------~~~~~---- 225 (433)
+|+ .+|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+...... .++..
T Consensus 76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 155 (387)
T 3goa_A 76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLS 155 (387)
T ss_dssp TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHH
T ss_pred cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHH
Confidence 999 57999999999999999999999999999999999999976432110 00000
Q ss_pred --------------------------hhhhhcC--------------CCCCCCCCcc-------------ccC------C
Q 013946 226 --------------------------CRALSQR--------------NNDPTKASRP-------------WDI------N 246 (433)
Q Consensus 226 --------------------------~~~ls~~--------------~~~~~~~~~p-------------fd~------~ 246 (433)
.+.+... ..++++.+|| |+. .
T Consensus 156 ~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~ 235 (387)
T 3goa_A 156 RLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235 (387)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceec
Confidence 0011100 0112333443 554 2
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
.++..++||++++||++++.|+++|.+++++|+|++.+.+... +.+.+...+++++|+++|++++||||||+|++
T Consensus 236 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~ve~h~~ 310 (387)
T 3goa_A 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPS-----IMGYGPVPASKLALKKAGLSASDIDVFEMNEA 310 (387)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTT-----STTCTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred ccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCC-----cchHHHHHHHHHHHHHcCCCHHHcCEEEEeCc
Confidence 5777899999999999999999999999999999999887533 33345689999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcC----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 327 STPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
++. .+...+ +.++- ..++++++.|..+||++||+|+.++++++++|+++
T Consensus 311 f~~----~~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------- 363 (387)
T 3goa_A 311 FAA----QILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------- 363 (387)
T ss_dssp BHH----HHHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred chH----HHHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------
Confidence 885 344433 34443 12577889999999999999999999999999871
Q ss_pred CcccccCccEEEEecccccceeeeeEEccC
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++++..+-||...++||++.
T Consensus 364 ------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 ------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEeccCcCceEEEEEEeC
Confidence 236777766667788999999863
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=271.83 Aligned_cols=270 Identities=22% Similarity=0.312 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| ++++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~~~~~l 76 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQT-------------------------GLGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCS-------------------------STTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCcchHHHHHHHHc
Confidence 356999999999999999999888 8999976421 11234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 57999999999999999999999999999999999999976542110
Q ss_pred ---HHHHHhh------------------------------hhhcC--------------CCCCCCCCcc-----------
Q 013946 221 ---GGFVACR------------------------------ALSQR--------------NNDPTKASRP----------- 242 (433)
Q Consensus 221 ---~~~~~~~------------------------------~ls~~--------------~~~~~~~~~p----------- 242 (433)
.+..... .+... ..++++.+|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 0000000 00000 0123334442
Q ss_pred --ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 013946 243 --WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 315 (433)
Q Consensus 243 --fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~ 315 (433)
|+. ..++..++||++++||++.+.|++++.+++++|.|++.+++. |.+.+.++..+++++|+++|+++
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~al~~agl~~ 311 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVE-----PEVMGTGPIPATRKALKKAGLSI 311 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGTTCTHHHHHHHHHHHTTCCG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCC-----CCcchHHHHHHHHHHHHHcCCCH
Confidence 432 246778899999999999999999999999999999988642 33334467899999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+||||||+|+..+ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 ~dId~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------- 372 (395)
T 4e1l_A 312 NDIDLIEANEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------- 372 (395)
T ss_dssp GGCSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------
T ss_pred HHcCEEEecChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999996644 7888888888754 3688999999999999999999999999999872
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++..+-||...++||++
T Consensus 373 --------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 --------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp --------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCCCceEEEEEeC
Confidence 23678888888889999999874
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=269.98 Aligned_cols=293 Identities=16% Similarity=0.163 Sum_probs=210.1
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAGK 101 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~aa~ 101 (433)
+.|+|+|...|.. .+.+++++.+. .+ +.+-. .. .. |..+. ....++..+|+++|++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~----~G------i~~r~~~~~~~~~~~la~~a~~ 59 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLD--TS-----DEWIV-----TR----TG------IKERRVAAEDEYTSDLAFKAVE 59 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HH----TC------CCEEEECCTTCCHHHHHHHHHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhC--CC-----HHHHH-----Hh----cC------ceEEeecCCCCCHHHHHHHHHH
Confidence 4799999999987 56667664321 10 00000 00 00 11111 1113457889999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCCCcceec
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 181 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~ 181 (433)
+||+++|+++++++ +|++|+.... ...+..+.+++..+|+++|+++|+
T Consensus 60 ~al~~ag~~~~~id-------~vi~~~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~v~ 107 (322)
T 1ub7_A 60 DLLRRHPGALEGVD-------AVIVATNTPD-------------------------ALFPDTAALVQARFGLKAFAYDLL 107 (322)
T ss_dssp HHHHHSTTTTTTEE-------EEEEECSSCS-------------------------EEESCHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCEEEeeC
Confidence 99999999988776 7898886411 112236889999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEEe
Q 013946 182 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 261 (433)
Q Consensus 182 ~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalvL 261 (433)
++|+|++.||..|+++|++|++|.+||+|+|.+ ++. ..|+| +++|+++||||+++||
T Consensus 108 ~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~---------------------~~~~d-~~~~~~~GdGA~A~vL 164 (322)
T 1ub7_A 108 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI---------------------IDWND-RATAVLFGDGGGAAVV 164 (322)
T ss_dssp CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT---------------------SCTTC-HHHHTTBCCEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc---------------------cChhh-cccceeeccccEEEEE
Confidence 999999999999999999999999999999983 321 12344 5679999999999999
Q ss_pred cchHHHHhcCCeEEEEE-EEeeeccCCCCCCC-----CCC---------Ch--------HHHHHHHHHHHHHcCCCCCCc
Q 013946 262 EELEHAKKRGAKIYAEF-RGGSFTSDAYHMTE-----PHP---------DG--------VGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 262 ~~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~~-----~~~---------~~--------~~~~~ai~~al~~agl~~~dI 318 (433)
++.+. +..+++.. .+.+...+..+... |.+ ++ ..+.++++++|+++|++++||
T Consensus 165 ~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~di 240 (322)
T 1ub7_A 165 GKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDI 240 (322)
T ss_dssp ECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred EecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 97643 34566654 33333223221110 221 23 578899999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 398 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 398 (433)
|||++|+++++..| ++.+.|+... -.+.+.|..+||+.+|++.+.+.++ ++++.+.
T Consensus 241 d~~~~H~~~~~~~d-----~~~~~lg~~~-~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~--------------- 296 (322)
T 1ub7_A 241 RLFVPHQANLRIID-----AARERLGLPW-ERVAVNVDRYGNTSTASIPLALKEA---VDAGRIR--------------- 296 (322)
T ss_dssp SEEEECCSCHHHHH-----HHHHTTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC---------------
T ss_pred CEEEEcCCCHHHHH-----HHHHHcCCCH-HHHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC---------------
Confidence 99999999998765 3666776532 1245789999999999999977654 4555441
Q ss_pred cccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 399 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+++++++||+|++|+++||+.
T Consensus 297 ----------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ----------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------CCCEEEEEEEChhheeEEEEEEe
Confidence 23688999999999999999974
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-32 Score=265.89 Aligned_cols=271 Identities=16% Similarity=0.169 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
...|+++++++||+| +|+++++|| +|++|+..... ......+.+++..
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~~------------------------~~~~~~a~~va~~ 80 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPVG------------------------DQGGDIARTAVLA 80 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCccc------------------------cccCcHHHHHHHH
Confidence 467999999999999 999999888 89999753210 0013357889999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh--------------------hHHHH----
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------------------LGGFV---- 224 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~--------------------~~~~~---- 224 (433)
+|+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... ..++.
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 5799999999999999999999999999999999999998653110 00000
Q ss_pred ------------Hh--------------hhhhc--------C---CCCCCCCCcc-------------ccCC--------
Q 013946 225 ------------AC--------------RALSQ--------R---NNDPTKASRP-------------WDIN-------- 246 (433)
Q Consensus 225 ------------~~--------------~~ls~--------~---~~~~~~~~~p-------------fd~~-------- 246 (433)
.. +.+.. . ..+|+..+|+ |+..
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 00 00000 0 0134444443 4422
Q ss_pred ------------------CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHH
Q 013946 247 ------------------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 308 (433)
Q Consensus 247 ------------------~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al 308 (433)
.++..++||++++||++++.|++++.+++++|.|++.+.+.... .+.+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI-----MLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc-----ccHHHHHHHHHHH
Confidence 46677999999999999999999999999999999987764322 2234578999999
Q ss_pred HHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCC
Q 013946 309 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387 (433)
Q Consensus 309 ~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 387 (433)
+++|++++||||||+|++.+. .|...+ +.|+-. .++++++.|..+||++||+|+.++++++++|+++
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~----~~l~~~-~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFAS----VVLKFQ-KDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHH----HHHHHH-HHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------
T ss_pred HHcCCCHHHCCEEEEeChhHH----HHHHHH-HHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------
Confidence 999999999999999998885 454444 445533 4688899999999999999999999999999862
Q ss_pred CCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++++..+.||...++||++
T Consensus 384 ---------------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 ---------------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp ---------------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred ---------------------CCCEEEEEeeccCcceEEEEEEc
Confidence 24788888888999999999986
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=252.16 Aligned_cols=289 Identities=16% Similarity=0.218 Sum_probs=206.8
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++.|+|+|...|.. .+.+++++.+. .+ +.+ + .+.. . |..+.....++..+|+++|++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i-~~~~----G------i~~r~~~~~~~~~~l~~~a~~ 59 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--TS-----DEW----I-TTRT----G------IKERRIAKEETITYMATQAAK 59 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH----H-HHHH----C------CCEEEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--CC-----HHH----H-HHHh----C------ceeeeecCCCCHHHHHHHHHH
Confidence 58999999999988 46666664321 10 000 0 0000 0 000100001567899999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Cccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~v 180 (433)
+||+++|++++++| +|++|+..+.. ..+..+.+++..+|+++ |++++
T Consensus 60 ~al~~ag~~~~~id-------~v~~~~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~v 107 (309)
T 2ebd_A 60 EALREANLSPEELD-------LIILATLTPQK-------------------------RFPSTACLVQAQLKAKGVYAFDI 107 (309)
T ss_dssp HHHHHHTCCGGGCS-------EEEEECSSCSS-------------------------SSSCHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCceEEec
Confidence 99999999998777 89999864211 11236889999999998 99999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|.+||+|+|.+. +. + . |+++.+|+++||||+++|
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~-----------~-~~~~~~~~~~gdGaaA~v 164 (309)
T 2ebd_A 108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLS-EA----------V-----------D-WEDRSTCVLFGDGAGAVV 164 (309)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GT----------C-----------C-TTCTTTTTTBCEEEEEEE
T ss_pred CccchHHHHHHHHHHHHHHCCCCCEEEEEEecccc-cc----------c-----------C-ccchhhccccccccEEEE
Confidence 99999999999999999999999999999999732 10 0 1 234568999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCCCCccEEEec
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP-----HPDGV--------GVILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~-----~~~~~--------~~~~ai~~al~~agl~~~dId~v~~h 324 (433)
|++.+.+ ..+++.+. .+++. +...| .+++. .+.++++++|+++|++++|||||++|
T Consensus 165 L~~~~~~----~~i~~~~~----~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 165 VTRSEDK----SDILATRM----YAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp EEECSSS----CEEEEEEE----EECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EEecCCC----CceeEEEE----EecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 9987542 23554443 23332 12222 33444 67889999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 325 ATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
+++++..| ++.+.|+... -.+.+.|..+||+.+|++++.|.+++. ++.+
T Consensus 237 ~~~~~~~~-----~~~~~lg~~~-~~~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~---------------------- 285 (309)
T 2ebd_A 237 QANVRIIN-----ALAEKLNIPK-EKVFVNIQKYGNTSAASIPIALHEAIK---EGKV---------------------- 285 (309)
T ss_dssp CSCHHHHH-----HHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHHHH---TTCC----------------------
T ss_pred CCCHHHHH-----HHHHHhCCCH-HHhhhhHhhhcchHHHHHHHHHHHHHH---cCCC----------------------
Confidence 99997654 4667777532 123467999999999999999887643 3221
Q ss_pred ccccCccEEEEecccccceeeeeEEc
Q 013946 405 KERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 405 ~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+++++.+||.|.+..+++++
T Consensus 286 ---~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ---KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ---CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---CCCCEEEEEEEchhhhhEEEEEE
Confidence 11357788999999999999885
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=252.41 Aligned_cols=292 Identities=17% Similarity=0.193 Sum_probs=208.8
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 100 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~aa 100 (433)
++.|+|+|+..|.. .+.+++++.+. .+ +.+ +. .... |..+. ....++..+|+++|+
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~--------i~-~~~G------i~~r~~~~~~~~~~~l~~~a~ 59 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DEW--------IV-TRTG------IRERHIAAPNETVSTMGFEAA 59 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH--------HH-HHHC------CCEEEECCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HHH--------HH-HHhC------ceEEEecCCCCCHHHHHHHHH
Confidence 58899999999987 46677764321 00 000 00 0000 11111 113456789999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+++++++ +|++|+.... ...+..+.+++..||++ +|+++
T Consensus 60 ~~al~~ag~~~~~id-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~~ 107 (317)
T 1hnj_A 60 TRAIEMAGIEKDQIG-------LIVVATTSAT-------------------------HAFPSAACQIQSMLGIKGCPAFD 107 (317)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCeEEe
Confidence 999999999998777 8899986421 11234688999999998 89999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|++|.+||+|+|.+. +. + . |+.+.+|+++||||+++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~-----------~-~~d~~~~~~~GdGA~A~ 164 (317)
T 1hnj_A 108 VAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------C-----------D-PTDRGTIIIFGDGAGAA 164 (317)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------S-----------C-TTCHHHHTTBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhc-cc----------C-----------C-chhcccceeeccccEEE
Confidence 999999999999999999999999999999999732 11 0 0 22233589999999999
Q ss_pred EecchHHHHhcCCeEEEEEEE-eeeccCCCCCCC-----------CCCChH--------HHHHHHHHHHHHcCCCCCCcc
Q 013946 260 LLEELEHAKKRGAKIYAEFRG-GSFTSDAYHMTE-----------PHPDGV--------GVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~-----------~~~~~~--------~~~~ai~~al~~agl~~~dId 319 (433)
||++.+. ..+++.+.+ .+...+..+... ..+++. .+.++++++|+++|++++|||
T Consensus 165 vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did 239 (317)
T 1hnj_A 165 VLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 239 (317)
T ss_dssp EEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9998652 357777655 222222222211 113454 678899999999999999999
Q ss_pred EEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCcc
Q 013946 320 YINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 399 (433)
Q Consensus 320 ~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 399 (433)
||++|+++++..| ++.+.|+... -.+.+.|+.+||+.+|+..+.|..++ +.+.+
T Consensus 240 ~v~~H~~~~~~~d-----~i~~~lg~~~-~~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~----------------- 293 (317)
T 1hnj_A 240 WLVPHQANLRIIS-----ATAKKLGMSM-DNVVVTLDRHGNTSAASVPCALDEAV---RDGRI----------------- 293 (317)
T ss_dssp EEEECCSCHHHHH-----HHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCS-----------------
T ss_pred EEEEcCCCHHHHH-----HHHHHcCCCH-HHhHhhHhhhCcHHHHHHHHHHHHHH---HhCCC-----------------
Confidence 9999999998765 4667777542 23568899999999999998876653 33322
Q ss_pred ccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 400 LVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 400 ~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|.+..+++|+
T Consensus 294 --------~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 294 --------KPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp --------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------CCCCEEEEEEEchhheeEEEEEE
Confidence 01246788899999888888875
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-31 Score=252.85 Aligned_cols=296 Identities=19% Similarity=0.210 Sum_probs=206.8
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLT 98 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~ 98 (433)
+.++.|+|+|+.+|.. .+.+++|+.+.. + +.|-. .+ . . |..+. ....++..+|+++
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~--~-----~~~i~----~~-~----G------i~~R~~~~~~~~~~~la~~ 66 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDS--T-----EEWIE----TR-T----G------IRSRRIAEPDETIQVMGVA 66 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSC--C-----HHHHH----HH-H----C------CSEEECCCTTCCHHHHHHH
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCC--C-----HHHHH----Hh-c----C------ceEEEEeCCCCCHHHHHHH
Confidence 3679999999999998 567777654321 0 00000 00 0 0 11111 1123457899999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 177 (433)
|+++||+++|+++++++ +|++|+..+.+ .....+.+++..||++ +|+
T Consensus 67 Aa~~al~~ag~~~~~id-------~vi~gt~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~ 114 (339)
T 1mzj_A 67 ASRRALEHAGVDPAEID-------LVVVSTMTNFV-------------------------HTPPLSVAIAHELGADNAGG 114 (339)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------CSSCHHHHHHHHHTCTTCEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHHHHHhCCCCccE
Confidence 99999999999998777 89999865321 1122678999999998 699
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. +. ++.+.+|+++||||+
T Consensus 115 ~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~ 171 (339)
T 1mzj_A 115 FDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID------------LADRSLSFLFGDGAG 171 (339)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC------------SSCTTTTTTBCEEEE
T ss_pred EEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC------------ccccccceEeccCce
Confidence 9999999999999999999999999999999999983 231 11 123467999999999
Q ss_pred EEEecchHHHHhcCCeEEEEE-EEeeeccCCCCCC--CC-------------CCCh--------HHHHHHHHHHHHHcCC
Q 013946 258 VLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMT--EP-------------HPDG--------VGVILCIEKALAHSGV 313 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~--~~-------------~~~~--------~~~~~ai~~al~~agl 313 (433)
++||++.+. ..+++.. .+.+...+..+.. .| ..++ ..+.++++++|+++|+
T Consensus 172 A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl 246 (339)
T 1mzj_A 172 AAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGL 246 (339)
T ss_dssp EEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997642 3344432 2222222211111 01 1123 5678899999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
+++|||||++|+++++.+|. +.+.|+-...-.+......+||+.+|+..+.|.+++ +.+.+
T Consensus 247 ~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~---~~g~~----------- 307 (339)
T 1mzj_A 247 TVGDLVAFVPHQANLRIIDV-----LVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLV---RSGAV----------- 307 (339)
T ss_dssp CGGGCSEEEECCSCHHHHHH-----HHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHH---HHTSS-----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 99999999999999987774 556676432202223457899999999988876553 44332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+++++.+||.|.+..+++|+-
T Consensus 308 --------------~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 308 --------------PGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEchhheeEEEEEEe
Confidence 123578889999999999999863
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=247.78 Aligned_cols=247 Identities=15% Similarity=0.211 Sum_probs=184.8
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
.+..+|+++|+++||+++|++++++| +|++|+..++. . .+..+.+++.
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-------~vi~~~~~~~~--------------------~-----~~~~a~~v~~ 96 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-------MIIVATATGDM--------------------P-----FPTVANMLQE 96 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC--------------------S-----SSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCC--------------------C-----CCcHHHHHHH
Confidence 34678999999999999999998777 89999864211 1 1235789999
Q ss_pred HhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 170 DLGWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 170 ~lgl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
.+|++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+... .+|+|. .+
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~----------------------~~~~d~-~~ 153 (313)
T 1zow_A 97 RLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI----------------------TDLTDR-ST 153 (313)
T ss_dssp HHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT----------------------CCTTCH-HH
T ss_pred HhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc----------------------cCcccc-cc
Confidence 99998 5999999999999999999999999999999999999973211 134442 36
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEE-EEEeeeccCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTEP----HPDG--------VGVILCIEKALAHSGVSR 315 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~-i~g~~~~~d~~~~~~~----~~~~--------~~~~~ai~~al~~agl~~ 315 (433)
|+++||||+++||++.+. +..+++. +.+.+...+..+...+ .+++ ..+.++++++|+++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~ 229 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTS 229 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred eeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 899999999999997653 3455543 3333322222222111 1233 267789999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||||++|+++++..|. +.+.|+-.. +++ ..|..+||+.+|++++.|..++ +++.+
T Consensus 230 ~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~------------ 287 (313)
T 1zow_A 230 DDIDLFIPHQANIRIMES-----ARERLGISKDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL------------ 287 (313)
T ss_dssp GGCSEEEECCSCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC------------
T ss_pred HHCCEEEEcCCCHHHHHH-----HHHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC------------
Confidence 999999999999987775 455666432 233 4699999999999999887653 33321
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+++++.+||.|.+..+++|+
T Consensus 288 -------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 -------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp -------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12367889999999999999886
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-29 Score=238.68 Aligned_cols=296 Identities=18% Similarity=0.242 Sum_probs=202.3
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLT 98 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~ 98 (433)
|.++.|+|+|+..|.. .+.+++|+.+.. + +.| +... .-|..+. ....++..+|+++
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~------------i~~~---~gi~~r~~~~~~~~~~~la~~ 67 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDS--S-----DEW------------IYTR---TGIKTRRFAADDESAASMATE 67 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSC--C-----HHH------------HHHH---HCCSEEEECCTTCCHHHHHHH
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCC--C-----HHH------------HHHh---cCCceEeecCCCCCHHHHHHH
Confidence 5679999999999987 567777653311 0 000 0000 0011111 1123457899999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 177 (433)
|+++||+++|+++++|| +|++++..+++ ..+..+.+++..||++ +|+
T Consensus 68 A~~~al~~ag~~~~~id-------~vi~~t~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~ 115 (335)
T 1u6e_A 68 ACRRALSNAGLSAADID-------GVIVTTNTHFL-------------------------QTPPAAPMVAASLGAKGILG 115 (335)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------SSSCHHHHHHHHHTCTTSEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCChHHHHHHHHhCCCCCcE
Confidence 99999999999998777 89999864311 1124678999999998 599
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|.+||+|+|.+. + ..+|+| ..+++++||||+
T Consensus 116 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~---------------------~~~~~d-~~~~~~~gDGA~ 172 (335)
T 1u6e_A 116 FDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLS-P---------------------TIDMYD-RGNCFIFADGAA 172 (335)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECG-G---------------------GCCTTC-TTTTTTBCEEEE
T ss_pred eeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccc-c---------------------ccCccc-cccceEeccccE
Confidence 99999999999999999999999999999999999842 1 123444 348999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEe-eeccCCCCCC---------------CCCCCh--------HHHHHHHHHHHHHcCC
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGG-SFTSDAYHMT---------------EPHPDG--------VGVILCIEKALAHSGV 313 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~-~~~~d~~~~~---------------~~~~~~--------~~~~~ai~~al~~agl 313 (433)
++||++.+. ++ ++.++.+. +...+..+.. ....++ ..+.++++++|+++|+
T Consensus 173 A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl 247 (335)
T 1u6e_A 173 AVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGV 247 (335)
T ss_dssp EEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997653 22 33333332 1111111000 011122 3567899999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
+++|||||++|+++++..|. +.+.|+-...-.+...+..+||+.+|+..+.|..+ ++.+.+
T Consensus 248 ~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~~----------- 308 (335)
T 1u6e_A 248 RPDQIDVFVPHQANSRINEL-----LVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LTTGAA----------- 308 (335)
T ss_dssp CGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HHHTSS-----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---HHcCCC-----------
Confidence 99999999999999987665 45566643221233347889999999865433222 222111
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+++++++||+|++++++||+-
T Consensus 309 --------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 --------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 124688999999999999999874
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-28 Score=231.40 Aligned_cols=289 Identities=19% Similarity=0.225 Sum_probs=202.4
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
.++.|+|+|+..|.. .+.+++++.+.. + +.|-. .+ . . |..+.....++..+|+++|+
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~i~----~~-~----G------i~~R~~~~~~~~~~la~~Aa 61 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAELDT--S-----DAWIS----SR-T----G------VRQRHIAGDLGSGDLALRAA 61 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTC--C-----HHHHH----HH-H----C------CCEEECCTTCCHHHHHHHHH
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHhCC--C-----HHHHH----Hh-h----C------ceEEEecCCCCHHHHHHHHH
Confidence 368999999999998 577778766421 1 00000 00 0 0 11111111156789999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+ ++++ .|++++..+. ...+..+.+++..||++ +|+++
T Consensus 62 ~~al~~ag~--~~id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lgl~~~~~~~ 107 (331)
T 2x3e_A 62 SAALASAGL--ERVD-------AVVLATSTGD-------------------------FCCPATAPRVAARLGLVGALAFD 107 (331)
T ss_dssp HHHHHHHTC--SCCS-------EEEEECSSCS-------------------------EEESCSHHHHHHHTTCTTSEEEE
T ss_pred HHHHHhCCc--ccCC-------EEEEEeCCCC-------------------------CCCChHHHHHHHHhCCCCCcEEE
Confidence 999999999 5565 7888876421 11123578999999998 79999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. +. +++..+++++||||+++
T Consensus 108 v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~A~ 164 (331)
T 2x3e_A 108 LSAAATGFVYGLASVGSLISAGLADSALLVGVDTF-SHT----------LD------------PADRSTRALFGDGAGAV 164 (331)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGG----------SC------------TTCHHHHHHBCCEEEEE
T ss_pred EcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccC----------CC------------ccccccceeeccccEEE
Confidence 99999999999999999999999999999999983 221 00 12234689999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCC---CCCCC----------------CCCh--------HHHHHHHHHHHHHcC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP----------------HPDG--------VGVILCIEKALAHSG 312 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~----------------~~~~--------~~~~~ai~~al~~ag 312 (433)
||++.+.+ ++..+++.. ..+++. ....| ..++ ..+.++++++|+++|
T Consensus 165 vL~~~~~a--~~~~i~~~~----~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~ag 238 (331)
T 2x3e_A 165 VLRAGDAE--EEGALLAFD----LGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVG 238 (331)
T ss_dssp EEEEECTT--STTBEEEEE----EEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCC--CCCceEEEE----EEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99987644 344555443 222322 11111 1123 567889999999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCC
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 391 (433)
++++|||||++|+++++..|. +.+.|+-. .+++ ..+..+||+.+|+..+.|..+ ++.+.+
T Consensus 239 l~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~--------- 299 (331)
T 2x3e_A 239 WQASDLHHLVPHQANTRILAA-----VADQLDLPVERVV--SNIAEVGNTVAASIPLALAHG---LRQGIL--------- 299 (331)
T ss_dssp CCGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCS---------
T ss_pred CCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHh--hhHhhhCcHHHHHHHHHHHHH---HHhCCC---------
Confidence 999999999999999987764 55666643 1233 245789999999988776654 333322
Q ss_pred CCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|.+..+++|+
T Consensus 300 ----------------~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 300 ----------------RDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp ----------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCCEEEEEEEeHHhhheeeEEE
Confidence 12357888999999999999885
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=238.61 Aligned_cols=310 Identities=14% Similarity=0.099 Sum_probs=207.9
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCC-----CCCCCCcc-ccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-----DCTSFPTK-IAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~-----~~~~~~~~-~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
+.|+|+|+..|.. .+.+++|+.+......... +++ ...+...+ +....+.|+..+-++++.....++..+|+
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la 88 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV 88 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence 7899999999987 6888888877543100000 000 00111111 11111112211112334433345678999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG- 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G- 175 (433)
++|+++||+++|+++++|+ .|++++..+ +. ....+.+++..||+++
T Consensus 89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~~-----~p~~a~~v~~~lGl~~~ 135 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------FM-----MPSLTAWLINEMGFDST 135 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------CC-----SSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------CC-----CCcHHHHHHHHhCCCCC
Confidence 9999999999999998777 788887531 11 1245789999999998
Q ss_pred -Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC----C
Q 013946 176 -PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD----G 249 (433)
Q Consensus 176 -p~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~----G 249 (433)
|+++| +++|+|++.||..|+++|++|.+|.+||+|+|.+ ++. .+|+|.+++ +
T Consensus 136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~---------------------~~~~d~~~~~~~~~ 193 (382)
T 1u0m_A 136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC---------------------YQPTDLGVGSLLCN 193 (382)
T ss_dssp CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG---------------------CCTTCCSHHHHHHH
T ss_pred cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh---------------------cCcccCCHHHhhcc
Confidence 88999 8999999999999999999999999999999973 221 134444333 8
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeee--ccCCCC----------------CCCCCCChHHHHHHHHHHHHHc
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--TSDAYH----------------MTEPHPDGVGVILCIEKALAHS 311 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~--~~d~~~----------------~~~~~~~~~~~~~ai~~al~~a 311 (433)
+++||||+|+||++.+. ++. +|.++.. ..++.+ ...+......+. +++++|+++
T Consensus 194 ~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~a 265 (382)
T 1u0m_A 194 GLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEH 265 (382)
T ss_dssp HHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTT
T ss_pred chhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHc
Confidence 99999999999997543 232 4455433 233321 011122245677 999999999
Q ss_pred CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCC
Q 013946 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389 (433)
Q Consensus 312 gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 389 (433)
|++++|||||++|+++++..|. +.+.++-. .++++ .+.+..+||+.+|+..+.|..++ +.+.+.
T Consensus 266 gl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~------ 331 (382)
T 1u0m_A 266 GWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE------ 331 (382)
T ss_dssp SCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC------
T ss_pred CCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC------
Confidence 9999999999999999987664 44556543 12332 25678899999999877776554 333220
Q ss_pred CCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 390 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+.++..+||.|.+..+++|+
T Consensus 332 -------------------~Gd~vll~~~G~G~t~~~~vl~ 353 (382)
T 1u0m_A 332 -------------------EGARGLLAGFGPGITAEMSLGC 353 (382)
T ss_dssp -------------------SSCCCEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCEEEEEEEcccceeEEEEEE
Confidence 1245677899998888888875
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=247.44 Aligned_cols=307 Identities=13% Similarity=0.087 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||++++++++. -.|+++....... .+...........+..++..+|
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd~v---I~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVARA---IDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHH---CCEEEECCC-------------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcCHHHcceE---EEEEeeccccccc-----------------chhhhhhccccCHHHHHHHHcC
Confidence 4588999999999999999877632 1144443321000 0001112233455778999999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHH-----------------------------
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG----------------------------- 222 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~----------------------------- 222 (433)
+.+ +.++++.+|+|++.+|..|++.|++|++|++|+||+|.+.+...+..
T Consensus 103 l~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 182 (520)
T 4egv_A 103 ADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEY 182 (520)
T ss_dssp CCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHH
Confidence 987 67788999999999999999999999999999999998643211000
Q ss_pred --------------HHHhhhhhcCC----------------------CCCCCC--------------------CccccCC
Q 013946 223 --------------FVACRALSQRN----------------------NDPTKA--------------------SRPWDIN 246 (433)
Q Consensus 223 --------------~~~~~~ls~~~----------------------~~~~~~--------------------~~pfd~~ 246 (433)
+.......... .+|+.. +.|+...
T Consensus 183 ~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta 262 (520)
T 4egv_A 183 TIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRL 262 (520)
T ss_dssp TGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGG
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccc
Confidence 00000000000 011111 1223233
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCC--CCCCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY--HMTEPH-PDGVGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~--~~~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
.|+..++|||+++||.+++.|++.|.++++.|.+++...... ....+. ....+...+++++|+++|++++|||++|+
T Consensus 263 ~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 263 MVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp GCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 466678999999999999999999999888887776554322 112222 23567889999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHcC----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc-
Q 013946 324 HATSTPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN- 398 (433)
Q Consensus 324 h~~gt~~~D~~E~~al~~~~~~----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~- 398 (433)
|..++ ++..+..+.+|- ..++++++.+.++||+++++|+..+++++++||++..+..++ .+++.+++.
T Consensus 343 ~dAF~-----~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~ 415 (520)
T 4egv_A 343 YSCFP-----FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKY 415 (520)
T ss_dssp CCSSS-----HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEE
T ss_pred eCCcH-----HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeee
Confidence 98776 344555555553 246889999999999999999999999999999998877665 466666653
Q ss_pred --cccCCcccccC----ccEEEEecccccceeeeeEEcc
Q 013946 399 --VLVGPKKERLE----VKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 399 --~~~~~~~~~~~----~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+....++++|+ ++++.+++ .|+|+++++
T Consensus 416 ~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~ 449 (520)
T 4egv_A 416 SVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITE 449 (520)
T ss_dssp EEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCS
T ss_pred eEEEEcCCCCCCCCCCCCccccccc-----CCCCccccc
Confidence 22333444453 34454444 788888765
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-27 Score=256.22 Aligned_cols=330 Identities=12% Similarity=0.072 Sum_probs=221.0
Q ss_pred CCCCCEEEEecceecCcC-------------CCHHHHHHHH------HcCCCCceeCCCCCCCCCCccccccccCCCCCC
Q 013946 19 MKQKRVVVTGMGLVSPLG-------------HEPDVFYNNL------LEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 79 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g-------------~~~~~~~~~l------~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (433)
+.+.++.|+|+|..+|.+ .+.+++|+.+ ..+++++.+...++...+... .+++..
T Consensus 599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~------~~~~~~ 672 (979)
T 3tsy_A 599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE------HPNIGA 672 (979)
T ss_dssp SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH------CHHHHS
T ss_pred cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc------Cccccc
Confidence 445689999999999998 3334444444 445566655433322111000 111112
Q ss_pred CC----ChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcc
Q 013946 80 WV----APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCV 155 (433)
Q Consensus 80 ~i----~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (433)
++ ..+..+..+....|+++|+++||++||+++++|| .|+++++.+
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~~------------------------ 721 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTSG------------------------ 721 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC------------------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeCC------------------------
Confidence 22 2333344445677999999999999999999887 788887431
Q ss_pred cccccchHHHHHHHHhCCCCCc---ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC
Q 013946 156 PFATTNMGSAMLAMDLGWMGPN---YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 232 (433)
Q Consensus 156 ~~~~~~~~a~~ia~~lgl~Gp~---~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~ 232 (433)
...+..+..++..||++++. +.++++|+|++.||..|.++|++|.++.|||+|+|......
T Consensus 722 --~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-------------- 785 (979)
T 3tsy_A 722 --VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-------------- 785 (979)
T ss_dssp --CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC--------------
T ss_pred --CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe--------------
Confidence 11235688999999998754 89999999999999999999999999999999999732110
Q ss_pred CCCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC----------------
Q 013946 233 NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD---------------- 296 (433)
Q Consensus 233 ~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~---------------- 296 (433)
.....++++...+++++||||+|+||++.+.+..++..++....+.....+..+...+.+.
T Consensus 786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 862 (979)
T 3tsy_A 786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLI 862 (979)
T ss_dssp ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHH
Confidence 0011122333335689999999999998776655667777777777665554433222111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
...+.++++++|+++|++++||||++.|..+++..|. +.+.++-. .++..+ .....+||+.+||=.+.|..+.
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~-----~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDA-----VEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHH-----HHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHH-----HHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 1236789999999999999999999999988875544 44445432 122221 2345679999999888777765
Q ss_pred HHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 375 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 375 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
..++.|.. + .........+..+||.|-+..+++++
T Consensus 938 ~~~~~G~~------------------v---~~g~~~~~~ll~~~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 938 KKSLKGER------------------A---TTGEGLDWGVLFGFGPGLTIETVVLH 972 (979)
T ss_dssp HHHHHTTC------------------S---BTTTTCSEEEEEEECGGGEEEEEEEE
T ss_pred hhhccccc------------------c---cCCCCcceeEEEEeCCchHHHHHHHH
Confidence 54443211 0 01112456788899998888888876
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=221.45 Aligned_cols=308 Identities=13% Similarity=0.084 Sum_probs=208.4
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCC----------------CCceeCCCCCCCCCCccccccccCCCCCCC-CCh
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGV----------------SGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAP 83 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~----------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-i~~ 83 (433)
.++.|+|+|+..|.. .+.+++|+.+.... +++... ++.... ..+++.++ .+.
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R-~~~~~~---------~~~~~~~~~~~~ 81 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTR-HLVRDY---------TKPENSIKFRHL 81 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEE-CCSSCT---------TSGGGCGGGGGG
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcc-eeecCc---------cccccccccCCh
Confidence 368999999999998 57888998775321 222210 000000 02333322 233
Q ss_pred hhhhcC-----CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCccccc
Q 013946 84 KLSKRM-----DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 158 (433)
Q Consensus 84 ~~~~~~-----~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (433)
.+...+ ++..+|+++|+++||+++|+++++|| .|++++..+ +.
T Consensus 82 ~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~~---- 129 (374)
T 2h84_A 82 ETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------II---- 129 (374)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------CC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC----
Confidence 333334 77899999999999999999998887 788887641 11
Q ss_pred ccchHHHHHHHHhCCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCC
Q 013946 159 TTNMGSAMLAMDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND 235 (433)
Q Consensus 159 ~~~~~a~~ia~~lgl~G--p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~ 235 (433)
....+.+++..||+++ |++.|+ ++|+|++.||..|+++|++|++|.+||+|+|.+. +..
T Consensus 130 -~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~~---------------- 191 (374)
T 2h84_A 130 -IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LHF---------------- 191 (374)
T ss_dssp -SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GGC----------------
T ss_pred -CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hhh----------------
Confidence 1235789999999997 789996 8999999999999999999999999999999842 110
Q ss_pred CCCCCccccCC--CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC-------C-------CCCC--
Q 013946 236 PTKASRPWDIN--RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM-------T-------EPHP-- 295 (433)
Q Consensus 236 ~~~~~~pfd~~--~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~-------~-------~~~~-- 295 (433)
..|.|.+ .+++++||||+|+||++.+.+..++ ++ ++.+.+... ++... . ...+
T Consensus 192 ----~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 264 (374)
T 2h84_A 192 ----SNTDGGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIV 264 (374)
T ss_dssp ----CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHH
T ss_pred ----cCCCCHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHH
Confidence 0112211 1488999999999999876543222 44 666655431 11100 0 0001
Q ss_pred ChHHHHHHHHHHHHHcC------CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHH
Q 013946 296 DGVGVILCIEKALAHSG------VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGA 367 (433)
Q Consensus 296 ~~~~~~~ai~~al~~ag------l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~ 367 (433)
....+.++++++|+++| ++++||||| +|+++++..|. +.+.++-. .+++++ .....+||+.+|+-.
T Consensus 265 ~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~ 338 (374)
T 2h84_A 265 IGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMN-----IENSLGIDPKQTKNTWDVYHAYGNMSSASVI 338 (374)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHH-----HHHHTTCCGGGGHHHHHHHHHHCBCTTHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHH
Confidence 12457789999999999 999999999 99999986654 44555533 233332 456778999988876
Q ss_pred HHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 368 VEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 368 ~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.|..++ +.+. +.+.++..+||.|-+..+++|+..
T Consensus 339 ~~L~~~~---~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 339 FVMDHAR---KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHHHHH---TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHH---hhcC---------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 6665543 2211 235677789998888888888754
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=216.28 Aligned_cols=253 Identities=14% Similarity=0.136 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+++|+++||+++|+++++|| .|++++... +. ....+.+++..
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~---------------------~~-----~p~~a~~v~~~ 158 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG---------------------FI-----APGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC---------------------CC-----SSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------Cc-----cChHHHHHHHH
Confidence 5678999999999999999998777 778887531 11 12457899999
Q ss_pred hCCCCC--ccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp--~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++++ ++.+ +++|+|++.||..|+++|++|.+|.+||+|+|.+.... . |+.++
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~----------------------~-~~~~r 215 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA----------------------V-FADDI 215 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC----------------------C-CCSSH
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC----------------------C-CCCCH
Confidence 999875 5777 89999999999999999999999999999999843110 0 23334
Q ss_pred C----CcccccceeEEEecchHHHHhcCCeEEEEEEEeeec--cCCCCC--------------CC--CCCChHHHHHHHH
Q 013946 248 D----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--SDAYHM--------------TE--PHPDGVGVILCIE 305 (433)
Q Consensus 248 ~----G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~--~d~~~~--------------~~--~~~~~~~~~~ai~ 305 (433)
+ ++++||||+|+||++.+.+..++. .+++|.+++.. .++... .. +......+.++++
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 3 899999999999997654422333 45678876544 454321 00 1112346778999
Q ss_pred HHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcC
Q 013946 306 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIH 383 (433)
Q Consensus 306 ~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ip 383 (433)
++|+++|++++|||||+.|+++++..|.+ .+.++-. .++.+ ......+||+.+|+-.+.|..++ +.+.+
T Consensus 295 ~aL~~agl~~~dId~~~~H~~~~~i~d~~-----~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~- 365 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIHPGGPKIIEQS-----VRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAES- 365 (393)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHHHH-----HHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSS-
T ss_pred HHHHHcCCCHhHCCEEEECCCcHHHHHHH-----HHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCcc-
Confidence 99999999999999999999999876644 3445532 12332 24567789999888666554332 33221
Q ss_pred CCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 384 PNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 384 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+ .+.+.++..+||.|.+..+++|+..
T Consensus 366 ----------------------~-~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 366 ----------------------A-KAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp ----------------------S-SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------C-CCCCeEEEEEeccchhhhhhheeec
Confidence 0 1246788899999999999988753
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.2e-24 Score=204.17 Aligned_cols=314 Identities=17% Similarity=0.142 Sum_probs=208.7
Q ss_pred CCCCCCEEEEecceecCcC-CCHHHHHHHHHc-----CCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCH
Q 013946 18 HMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLE-----GVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDK 91 (433)
Q Consensus 18 ~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~-----g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~ 91 (433)
.|+.+++.|+|+|...|.- .+.+++.+.+.. +.+. ..+ ....+...+ +....-..
T Consensus 7 ~m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~-~~i--~~~tGi~~R----------------~~~~~~~~ 67 (345)
T 3s21_A 7 HMLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT-DVL--GDVAGIHAR----------------RLWDQDVQ 67 (345)
T ss_dssp GGSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC-CHH--HHTTCCSEE----------------EECSSCCC
T ss_pred cceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH-HHH--HHhhCceeE----------------EECCCCCC
Confidence 3556789999999999997 577777776521 2110 000 000011000 00011123
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++... ....+..+.+++..+
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~-------------------------~~~~p~~a~~v~~~l 115 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG-------LLINTSVSR-------------------------DYLEPSTASIVSGNL 115 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC-------------------------CCCCChHHHHHHHHh
Confidence 578999999999999999999888 789987641 111234588999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|++ .|+++|+++|+|++.||..|+++|++|+++.+||+|+|.+.....+ ...+.++ +...|+||+.+..+
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~---~~~~~~~-----~~~~~~~f~~~~~~ 187 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEK---TLERMTS-----PDVTEEEFRNELAA 187 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHH---HHHHHTC-----TTCCHHHHHHHHGG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcc---ccccccC-----Cccchhhhhhhccc
Confidence 996 6899999999999999999999999999999999999986433211 1222222 33467899988899
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-------CCCChH--------HHHHHHHHHHHHcCCC
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------PHPDGV--------GVILCIEKALAHSGVS 314 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~al~~agl~ 314 (433)
+++||||+|+||++.+... .+. .|.+.....++..... ...++. .+.++++++|+++|++
T Consensus 188 ~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 262 (345)
T 3s21_A 188 LTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWA 262 (345)
T ss_dssp GGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999865321 122 3444444333321110 111222 3446789999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
++|||++..|..+... .+.+.+.++-.. +++ ..-..+||+.+|+-.+.|..++ +.|.+
T Consensus 263 ~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~----------- 321 (345)
T 3s21_A 263 VEELDQFVIHQVSRPH-----TAAFVKSFGIDPAKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRL----------- 321 (345)
T ss_dssp GGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCC-----------
T ss_pred HHHCCEEEeCCCCHHH-----HHHHHHHcCcCHHHce--eeHhhcCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 9999999999766653 345555565331 222 3335789999998777665543 34332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+-+.++..+||.|-+..+++|+
T Consensus 322 --------------~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 322 --------------KKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCCEEEEEEEChhhhheEEEEE
Confidence 01246777899998888888775
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=199.14 Aligned_cols=293 Identities=16% Similarity=0.221 Sum_probs=195.3
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++.|+|+|+..|.. .+.+++|+.+.+.. +...+.|-. .+. .+.. +.....-.+...|+.+|++
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~i~----~rt--gi~~--------r~~~~~~~~~~~la~~Aa~ 74 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEWIV----ART--GIHA--------RYFAEPDVTTSDLAFIASQ 74 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHH----HHH--CCSE--------EEECCTTCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHHhH----Hhc--CceE--------EEEcCCCCCHHHHHHHHHH
Confidence 79999999999997 68899998874311 110000000 000 0000 0000111346789999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC--CCCcce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~~ 179 (433)
+||+++|+++++|| .|++++..+. ...+..+.+++..+|+ +.|+++
T Consensus 75 ~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lgl~~~~~~~~ 122 (333)
T 4dfe_A 75 RAIEAADIDPQSID-------LIIVATSTPD-------------------------FVFPSTACLLQNKLGIRNHGAAFD 122 (333)
T ss_dssp HHHHHHTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHTTCCSCCEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHhCCCCCCcEEE
Confidence 99999999999887 8999886421 1123458899999999 569999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|+++.+||+|+|.+.... -|+.+..++++||||+|+
T Consensus 123 v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~~~d~~~~~lfGDGA~A~ 179 (333)
T 4dfe_A 123 VQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------------DFKDRTTCVLFGDGAGAV 179 (333)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------CTTCTTTTTTBCEEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------------CcccccceeeeccccEEE
Confidence 999999999999999999999999999999999842111 022334678999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCCC---CC--------------CCCCCh--------HHHHHHHHHHHHHcCCC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYH---MT--------------EPHPDG--------VGVILCIEKALAHSGVS 314 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~--------------~~~~~~--------~~~~~ai~~al~~agl~ 314 (433)
||++.+ +..+. ++...+++.. .. ....++ ..+.++++++|+++|++
T Consensus 180 vl~~~~-----~~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 250 (333)
T 4dfe_A 180 ILQASD-----EPGVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLS 250 (333)
T ss_dssp EEEEES-----SCSEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEcC-----CCCeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999754 12222 2222222210 00 001122 45668899999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
++||||+.+|..+.+ -.+++.+.++-.. ++. .....+||+.+|+=.+.|..+ ++.+.+
T Consensus 251 ~~did~~~~Hq~~~~-----i~~~~~~~lgl~~~~~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~----------- 309 (333)
T 4dfe_A 251 AEQIDWLIPHQANIR-----IMQSTCRKLGLPQERMI--VTVGEHGNTSAASIPLALDVA---VRDGRI----------- 309 (333)
T ss_dssp GGGCSEEEECCSCHH-----HHHHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCS-----------
T ss_pred HHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHHhh--hhHHhcCchHHHHHHHHHHHH---HHcCCC-----------
Confidence 999999999977665 3455555565331 222 245678999999866655543 334332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+..+++++
T Consensus 310 --------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 310 --------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCCEEEEEEEchhheeEEEEEE
Confidence 11246677889999888888875
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-19 Score=176.22 Aligned_cols=246 Identities=15% Similarity=0.147 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|++++...+ ...+..+..++..
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~-------------------------~~~p~~a~~v~~~ 163 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQ-------------------------RAYPAMAIEVQNA 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCS-------------------------CSBSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------CCccHHHHHHHHH
Confidence 4678999999999999999999888 8888876421 1123468899999
Q ss_pred hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 171 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 171 lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
+|++.+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.+. .. + . +......+
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S-~~----------~-----------d-~~dr~t~~ 220 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICS-GH----------L-----------N-FRDRDSHF 220 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GG----------C-----------C-TTCTTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcC-Cc----------C-----------C-cCcccCCc
Confidence 999889999999999999999999999999999999999999732 11 0 1 11223578
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCC----------------C----CCCCChH--------HHHH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM----------------T----EPHPDGV--------GVIL 302 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~----------------~----~~~~~~~--------~~~~ 302 (433)
++||||+|+||++.+... .+ ..|.+....+++... . ....++. .+..
T Consensus 221 lFGDGA~A~vl~~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~ 295 (392)
T 3led_A 221 IFGDVATAAIVERADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSE 295 (392)
T ss_dssp TBCEEEEEEEEEEGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHH
T ss_pred ccccccEEEEEEecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHH
Confidence 999999999999754210 11 234443333222110 0 0011222 2346
Q ss_pred HHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcC
Q 013946 303 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 380 (433)
Q Consensus 303 ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~ 380 (433)
+++++|+++|++++|||++..|-.+.. -.+++.+. ++-. ..-.+...-..+||+.+|+=.+.|-. + .+
T Consensus 296 ~i~~~L~~~gl~~~dId~~v~Hqan~~-----i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~----~-~~ 365 (392)
T 3led_A 296 MIIEHAREIGIDPHGLKRMWLHQANIN-----MNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK----H-QD 365 (392)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECSSCHH-----HHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH----C-CT
T ss_pred HHHHHHHHcCCCHHHCcEEEEcCCCHH-----HHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH----H-hC
Confidence 789999999999999999999965543 34444444 3521 11112233456799988775544332 1 11
Q ss_pred CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 381 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 381 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+ .+-+.++..+||.|-+..+++|+.
T Consensus 366 ~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 366 DM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 11 112567778999998888888874
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-19 Score=173.43 Aligned_cols=304 Identities=15% Similarity=0.128 Sum_probs=188.6
Q ss_pred CCCCCCCCCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHH
Q 013946 14 KKKPHMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 14 ~~~~~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 92 (433)
...|.++.+.+.|+|+|...|.- .+.+++.+.+. +.+ ...+ +...+...+ .+.. .-...
T Consensus 21 ~~~~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i--~~~tGI~~R-----------~~a~-----~~~~~ 80 (365)
T 3gwa_A 21 SMTPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKI--LAKTGIRER-----------RIAA-----PRETA 80 (365)
T ss_dssp --------CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHH--HHHHCCCEE-----------EECC-----TTCCH
T ss_pred ccCccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHH--HHhcCccEE-----------EECC-----CCCCH
Confidence 33555666789999999999997 57777776541 110 0000 000000000 0000 11235
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .|++++...+ ...+..+..++..+|
T Consensus 81 ~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lG 128 (365)
T 3gwa_A 81 ADLAYEAARKLFAQGAVGADQVD-------FVILCTQAPD-------------------------YVLPTSACMLQHRLG 128 (365)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGCC-------EEEEEESSCS-------------------------CSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHcC
Confidence 78999999999999999999888 8899876421 112335789999999
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
++ .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.+..... + ++....+
T Consensus 129 l~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------~-------~dr~~~~ 185 (365)
T 3gwa_A 129 IPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH----------------P-------LDKSVRT 185 (365)
T ss_dssp CCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC----------------T-------TCHHHHT
T ss_pred CCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC----------------c-------ccccccc
Confidence 97 589999999999999999999999999999999999998432210 0 0112356
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEe-eecc-------CCCC-CC-------------------CCCCCh-----
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGG-SFTS-------DAYH-MT-------------------EPHPDG----- 297 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~-~~~~-------d~~~-~~-------------------~~~~~~----- 297 (433)
++||||+|+||++.+.. ...+.....+. +... .+.. .. ....++
T Consensus 186 lfGDGAaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~ 262 (365)
T 3gwa_A 186 LFGDGASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMA 262 (365)
T ss_dssp TBCCEEEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHH
T ss_pred cccceeEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHH
Confidence 89999999999875321 01122222111 1100 0000 00 000112
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHH
Q 013946 298 ---VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 298 ---~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~ 373 (433)
..+.++++++|+++|++++|||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+
T Consensus 263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~Lgl~~ek~~--~~l~~~GNtssAsipl~L~~~ 335 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF-----MLDALRKKMKIPEHKFP--VLMEHCGNTVSSTLPLALETM 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHHTCCGGGSC--CCCTTTCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHHHH--HHHhcccchHHHHHHHHHHHH
Confidence 23456889999999999999999999965543 3455666665431 222 233568999988765544433
Q ss_pred HHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 374 VQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 374 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
++.+.+ .+-+.++..+||.|-+..++|++
T Consensus 336 ---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 336 ---RANGTL-------------------------ARGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp ---HHTTCC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---HHcCCC-------------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 344332 12356777899999888888875
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-18 Score=165.77 Aligned_cols=240 Identities=18% Similarity=0.177 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++..+. ...+..+.+++..+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 105 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHS-------------------------HAYPSAACQVQGLL 105 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCccHHHHHHHHh
Confidence 578999999999999999999888 8899886421 11223588999999
Q ss_pred CCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|++ .|++.|+.+|+|++.||..|+++|++|+++.+||+|+|.+... + + ++.+...+
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-----------~-~~d~~~~~ 162 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------L-----------D-ETDRSTVV 162 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------C-----------C-TTCTTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------c-----------C-cccccccc
Confidence 996 4899999999999999999999999999999999999984211 0 0 11123568
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCC---CC------------CCCChH--------HHHHHHHHH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TE------------PHPDGV--------GVILCIEKA 307 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~---~~------------~~~~~~--------~~~~ai~~a 307 (433)
++||||+|+||++.+ ...++ ++...+++... .. ...++. .+.++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i~----~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGII----STHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCEE----EEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCeE----EEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999999753 12232 22222222100 00 011222 245678999
Q ss_pred HHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
|+++|++++|||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+ ++.+.+
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~---- 299 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLR-----IITATAKKLEMDMSQVV--VTLDKYANNSAATVPVALDEA---IRDGRI---- 299 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHH-----HHHHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTSS----
T ss_pred HHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHcCcCHHHhh--ccHhhcCchHHHHHHHHHHHH---HHcCCC----
Confidence 9999999999999999966543 3455666665331 222 234567999999866665543 334332
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+..+++++
T Consensus 300 ---------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 ---------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ---------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 11246677899999888888875
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-20 Score=180.87 Aligned_cols=265 Identities=13% Similarity=0.111 Sum_probs=172.2
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.+.|.|+|...|.- .+.+++.+.+ |.+. ..+. ...+...+ .+.+ .-.....|++.|++
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~--~~~~-~~i~--~~~Gi~~r-----------~~~~-----~~e~~~~la~~Aa~ 60 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFL--IGIGQTEM-----------AVSP-----VNQDIVSMGANAAK 60 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHH--TTTCCSEE-----------EECC-----TTCCHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh--CCCH-HHHh--hhcCceEE-----------EeCC-----CCCCHHHHHHHHHH
Confidence 47899999999986 5667766543 2110 0000 00000000 0000 11235689999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC--CCcce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM--GPNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~~ 179 (433)
+||++ +++++|+ .|++|+..+. ......+..++..||++ .+++.
T Consensus 61 ~aL~~--~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~~ 106 (396)
T 1xpm_A 61 DIITD--EDKKKIG-------MVIVATESAV-------------------------DAAKAAAVQIHNLLGIQPFARCFE 106 (396)
T ss_dssp TTCCH--HHHHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEEEE
T ss_pred HHHhc--CCHHHCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHhCCCCCceEEE
Confidence 99987 6666665 6777876421 11234678999999997 48999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++++|+|++.||..|.++|++|.++.+||+|+|. . ... ++ ..+++++||||+|+
T Consensus 107 v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s-~~~-----------------------~~-~~~~~~~GdGA~A~ 160 (396)
T 1xpm_A 107 MKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-A-RYG-----------------------LN-SGGEPTQGAGAVAM 160 (396)
T ss_dssp EESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-E-CCC-----------------------TT-CSSGGGCEEEEEEE
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-h-ccc-----------------------cC-CCCCcccccceEEE
Confidence 9999999999999999999999999999999996 1 110 11 13689999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeecc-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCCCCCCccEEEec
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTS-DAYHMTEPHP------DGVG--------VILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~------~~~~--------~~~ai~~al~~agl~~~dId~v~~h 324 (433)
||++. ..++....+.+... +..+...|.+ ++.. +.++++++|+++|++++|||||..|
T Consensus 161 vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H 233 (396)
T 1xpm_A 161 VIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFH 233 (396)
T ss_dssp EEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 99863 23555555433332 3332222222 4544 6789999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCC-CCc-----ccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 325 ATSTPAGDIKEYQALIHCFGQN-RGL-----RVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~-~~~-----~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
+++++..|......+....+-. ..+ +-......+||+.+||-.+.|..++.
T Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 234 VPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp CSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 9999877765433221100000 000 01122366899999987777766543
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=176.81 Aligned_cols=264 Identities=13% Similarity=0.097 Sum_probs=177.2
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHH
Q 013946 87 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 166 (433)
Q Consensus 87 ~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 166 (433)
..++....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+.+
T Consensus 120 ~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~--------------------------~~~p~~a~~ 166 (413)
T 1xes_A 120 MLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT--------------------------PDLPGADFE 166 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC--------------------------CEESCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CccchHHHH
Confidence 33456789999999999999999998887 788887641 112345789
Q ss_pred HHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccc
Q 013946 167 LAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 243 (433)
Q Consensus 167 ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pf 243 (433)
++..||++++ .++++.+|+|++.||..|.++|++|.++.+||+|+|.+...+ .++. .++|
T Consensus 167 v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~---------------~~~~--d~~~ 229 (413)
T 1xes_A 167 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF---------------RGPS--ETHL 229 (413)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC---------------CCCC--TTCH
T ss_pred HHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh---------------cCCC--ccch
Confidence 9999999875 788999999999999999999999999999999999742110 0111 1355
Q ss_pred cCCCCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCC-----ChHHHHHHH
Q 013946 244 DINRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHP-----DGVGVILCI 304 (433)
Q Consensus 244 d~~~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~-----~~~~~~~ai 304 (433)
+....++++||||+|+||++.+.. + .....++.+.+... +..... .... ....+..++
T Consensus 230 ~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 306 (413)
T 1xes_A 230 DSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCM 306 (413)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHH
Confidence 556678999999999999875421 2 11113444443221 110000 0000 123456789
Q ss_pred HHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHHHH-HcC
Q 013946 305 EKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQAI-RTG 380 (433)
Q Consensus 305 ~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l-~~~ 380 (433)
+++|+++|++ .+|| ++..|..+.. =.+++.+.++-. .++..+ .....+||+.+|+-.+.|..++..- +.|
T Consensus 307 ~~~L~~~gl~d~~di-~~v~Hq~~~~-----i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G 380 (413)
T 1xes_A 307 VEAFSQFKISDWNKL-FWVVHPGGRA-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNG 380 (413)
T ss_dssp HHHHGGGTCCCGGGS-EEEECCSCHH-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCccce-eEEECCCCHH-----HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccC
Confidence 9999999998 8888 8999976554 334455566533 233322 3456789999999887777665432 111
Q ss_pred CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 381 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 381 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.| . ...+.++..+||.|-+..+++|+-
T Consensus 381 ~~~~-----------------G-----~~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 381 CSTT-----------------G-----EGLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp CSBT-----------------T-----TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCC-----------------C-----CCcceEEEEEecCCcEEeEEEEEe
Confidence 1100 0 012567788999988888888763
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=176.37 Aligned_cols=264 Identities=12% Similarity=0.092 Sum_probs=176.1
Q ss_pred hhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccch
Q 013946 83 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNM 162 (433)
Q Consensus 83 ~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (433)
.+....+.....|+.+|+++||+++|+++++|| .|++++..+ ...+.
T Consensus 89 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~--------------------------~~~p~ 135 (387)
T 3a5r_A 89 VRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG--------------------------VDMPG 135 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCCCc
Confidence 344444567789999999999999999998887 788887641 11234
Q ss_pred HHHHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCC
Q 013946 163 GSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 239 (433)
Q Consensus 163 ~a~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 239 (433)
.+.+++..+|+++. .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+... .
T Consensus 136 ~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~---------------------~ 194 (387)
T 3a5r_A 136 ADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC---------------------F 194 (387)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT---------------------C
T ss_pred HHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh---------------------h
Confidence 68899999999875 78899999999999999999999999999999999973210 1
Q ss_pred CccccC----CCCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCC-----C
Q 013946 240 SRPWDI----NRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHP-----D 296 (433)
Q Consensus 240 ~~pfd~----~~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~-----~ 296 (433)
..|+|. ...++++||||+|+||++.+.. + .....++.+.+... +..... .... .
T Consensus 195 ~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 271 (387)
T 3a5r_A 195 RGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLI 271 (387)
T ss_dssp CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred cCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHH
Confidence 123332 3367899999999999875421 1 11113444433221 110000 0000 1
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~ 373 (433)
...+..+++++|+++|++ .+|| ++..|..+... .+++.+.++-.. ++..+ .....+||+.+|+-.+.|..+
T Consensus 272 ~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 272 SNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 234567899999999998 8889 89999776543 344555565321 23222 346778999999988777766
Q ss_pred HHHH-HcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 374 VQAI-RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 374 ~~~l-~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+..- +.|.+.| . ...+.++..+||.|-+..+++|+-
T Consensus 346 ~~~g~~~G~~~~-----------------G-----~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 346 RKKSLENGQATT-----------------G-----EGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHTTCSBT-----------------T-----TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhccccCCCCC-----------------C-----CCcceEEEEEecCcceeeehhhee
Confidence 5432 1111100 0 012567788999888888888763
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=168.05 Aligned_cols=244 Identities=16% Similarity=0.104 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|++++... ..| ... ..+..++..
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~------------------~~~----d~~--~~a~~v~~~ 101 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-------LVLHSSLWF------------------QGI----DLW--PAASYVAHE 101 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSC------------------CSS----SSS--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC------------------CCc----ccc--cHHHHHHHH
Confidence 3578999999999999999999888 788887520 001 111 247889999
Q ss_pred hCCCC-CcceecccchHHHHHHHHHHHHHHcCCCC--EEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG-PNYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d--~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++. +.+.|+.+|+|++.||..|..+|++|.++ .+||+++|.+..+. ...++. +
T Consensus 102 lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~---------------------~~~~~~-~ 159 (357)
T 3s3l_A 102 AVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR---------------------IDRWNS-V 159 (357)
T ss_dssp HTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT---------------------CCTTTS-S
T ss_pred hCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc---------------------cccccc-c
Confidence 99975 89999999999999999999999999999 99999999843111 011222 2
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC---------CCCC--------CCCh-------------
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH---------MTEP--------HPDG------------- 297 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---------~~~~--------~~~~------------- 297 (433)
.++++||||+|+||++.+ +. ..|.++...+++.. ...+ ..++
T Consensus 160 ~~~lfGDGA~A~vl~~~~-----~~---~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRD-----GF---ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSC-----CS---EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCC-----CC---CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 578999999999998642 11 12444433333321 0000 0011
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHH
Q 013946 298 ------VGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVE 369 (433)
Q Consensus 298 ------~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~ 369 (433)
..+.++++++|+++|++++|||++.+ |..... -+ ++.+.++-.. ++.. ..-..+||+.+|+=.+.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~ek~~~-~~~~~~GNt~aAsipl~ 304 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDERTSW-AYGRTTGHVGAGDQYAG 304 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGGGBTH-HHHHHHCBCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHHHhHH-HhccccccchHhHHHHH
Confidence 13456889999999999999999996 876655 33 3444454321 2221 22234688888875555
Q ss_pred HHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 370 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 370 l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
|..+ ++.|.+ .+-+.++..+||.|-+..+++|+
T Consensus 305 L~~~---~~~g~l-------------------------~~Gd~vll~~fG~G~t~~a~ll~ 337 (357)
T 3s3l_A 305 LAHL---VENALV-------------------------QPGDRVLLFGGGAGYTCTAAVVE 337 (357)
T ss_dssp HHHH---HHTTCC-------------------------CTTCEEEEECCBTTTEEEEEEEE
T ss_pred HHHH---HHcCCC-------------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 5443 333332 11246777899998888888876
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-18 Score=166.42 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++.... ...+..+..++..+
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 121 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPD-------------------------HHDPSQACLIQPLL 121 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 467999999999999999999888 8899876421 11224588999999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC-CCCC
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI-NRDG 249 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~-~~~G 249 (433)
|++. |.+.|+.+|+|++.||..|+.+|++|.++.+||+++|.+.... ++-|. ....
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~----------------------~~~d~~~~t~ 179 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM----------------------DCSDRGRNLS 179 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC----------------------CCSTTTHHHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC----------------------Cccccccccc
Confidence 9975 8999999999999999999999999999999999999842211 00010 1245
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEe-eec-----cC--CC-CCC------------CCCCChH--------HH
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGG-SFT-----SD--AY-HMT------------EPHPDGV--------GV 300 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~-~~~-----~d--~~-~~~------------~~~~~~~--------~~ 300 (433)
+++||||+|+||++.+. .+..++...... +.. .. +. ... ....++. .+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~ 256 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTL 256 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHH
Confidence 77999999999997432 122333222221 100 00 00 000 0001222 34
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 301 ~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+++++|+++|++++|||++..|-.+.. -.+.+.+.++-.. ++.. .-..+||+.+|+=.+.|..++. .
T Consensus 257 ~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~~---~ 326 (359)
T 3h78_A 257 VRIAGEMLAAHELTLDDIDHVICHQPNLR-----ILDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFWP---D 326 (359)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEECCSCHH-----HHHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHGG---G
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHHH---h
Confidence 56889999999999999999999965543 3455666665431 2222 3456799999986665554332 1
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+ .+-+.++..+||.|-+..+++|+
T Consensus 327 --l-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 327 --I-------------------------QPGQRVLVLTYGSGATWGAALYR 350 (359)
T ss_dssp --S-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --C-------------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 1 01245677789998888888886
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-18 Score=164.23 Aligned_cols=246 Identities=19% Similarity=0.246 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|+++++.+ ....+..+..|+..|
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~~~P~~a~~v~~~L 109 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-------AVIVSTVTF-------------------------PHATPSAAALVAHEI 109 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCC-------------------------SCSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC-------------------------CCCCCchHHHHHHHh
Confidence 467999999999999999999888 788888642 122345688999999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|++. +++.|+.+|++++.||..|..+|++|..+.+||+++|.+. .. + . +......+
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s-~~----------~-----------d-~~~~~~~~ 166 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLS-DV----------V-----------D-PTDRSISF 166 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GG----------C-----------C-TTCTTTGG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeece-ec----------c-----------c-cccccccc
Confidence 9976 7889999999999999999999999999999999999732 11 1 1 12233567
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEee-ec-----------------------cCCCCC--------CCCCCChH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FT-----------------------SDAYHM--------TEPHPDGV 298 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~-~~-----------------------~d~~~~--------~~~~~~~~ 298 (433)
++||||+|+||++.+.. .+.....+.. .. .+.... .....++.
T Consensus 167 lfgDGA~A~vl~~~~~~-----~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDEP-----GISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESSC-----CBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccCC-----CccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 89999999999865321 1111111110 00 000000 00111222
Q ss_pred --------HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHH
Q 013946 299 --------GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEA 370 (433)
Q Consensus 299 --------~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l 370 (433)
.+.++++++|+++|++++|||++..|..+.. =.+++.+.++-.....+...-..+||+.+||=.+.|
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L 316 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAM 316 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHH-----HHHHHHHHcCcChHhEEecccccccchHHHHHHHHH
Confidence 2456899999999999999999999965543 345566666533211122233457999888755544
Q ss_pred HHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 371 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 371 ~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.. .++++.+ .+.+.++..+||.|=+..++|++
T Consensus 317 ~~---~~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 317 HR---LLEENPE-------------------------LSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HH---HHHHCGG-------------------------GTTSEEEEEEEETTTEEEEEEEE
T ss_pred HH---HHHhCCC-------------------------CCcCEEEEEEEchhhEeEEEEEE
Confidence 33 3344332 12245666788876666777775
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-17 Score=158.58 Aligned_cols=293 Identities=15% Similarity=0.175 Sum_probs=181.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..+.|+|+|...|.- .+.+++.+.+ +.+ +.|-. .+ . ......+..+ -+ ...|+.+|+
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~i~----~~-~----Gi~~R~~a~~-----~e-~~~La~~Aa 60 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAWIH----SR-T----GISERRIVTQ-----EN-TSDLCHQVA 60 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHHHH----HH-H----SCSEEECCSS-----CC-HHHHHHHHH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhhhh----hh-c----CceEEEECCC-----CC-HHHHHHHHH
Confidence 568999999999996 5777776653 111 00000 00 0 0000000011 11 578999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+++++|| .|++++...+ ...+..+..++..+|++ .|++.
T Consensus 61 ~~aL~~ag~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~ 108 (321)
T 3il6_A 61 KQLLEKSGKQASEID-------FILVATVTPD-------------------------FNMPSVACQVQGAIGATEAFAFD 108 (321)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------cCCCcHHHHHHHHcCCCCceEEE
Confidence 999999999999888 8899886421 11234688999999997 48999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+.+|+|++.||..|+++|++|.++.+||+|+|.+. .. + . ++.+...+++||||+|+
T Consensus 109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~-----------~-~~dr~~~~lfGDGA~A~ 165 (321)
T 3il6_A 109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFS-KM----------L-----------D-WTDRSTAVLFGDGAAGV 165 (321)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGG-GG----------S-----------C-TTCTTTGGGBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------C-----------C-ccccccceeeccccEEE
Confidence 999999999999999999999999999999999842 11 0 0 11223567899999999
Q ss_pred EecchHHHHhcCCeEEEEEEEe-ee-----ccC--CCCCC----------CCCCChHHH----HHHHHHHHHHcCCCCCC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGG-SF-----TSD--AYHMT----------EPHPDGVGV----ILCIEKALAHSGVSRED 317 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~-~~-----~~d--~~~~~----------~~~~~~~~~----~~ai~~al~~agl~~~d 317 (433)
||++.+. ..+....... +. ... +.... ....++... .+.+.++++++ +.++|
T Consensus 166 vl~~~~~-----~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~d 239 (321)
T 3il6_A 166 LIEAAET-----PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDET 239 (321)
T ss_dssp EEEEESS-----CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGG
T ss_pred EEEEcCC-----CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCccc
Confidence 9997542 1232222211 10 000 00000 011122221 22333444433 33899
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+ ++.+.+.|.
T Consensus 240 id~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~~G----------- 298 (321)
T 3il6_A 240 VDYLLLHQANVR-----IIDKIARKTKISREKFL--TNMDKYGNTSAASIPILLDEA---VENGTLILG----------- 298 (321)
T ss_dssp CSEEEECCSCHH-----HHHHHHHHHTCCGGGBC--CCGGGTCBCGGGHHHHHHHHH---HHTTSSCTT-----------
T ss_pred CCEEEEcCCCHH-----HHHHHHHHcCcCHHHhh--hhHhhcccHHHHHHHHHHHHH---HHhCCCCCC-----------
Confidence 999999955443 4556666665431 222 245678999998866555443 344433110
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
..+.++..+||.|-+..+++++
T Consensus 299 ------------~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 299 ------------SQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ------------SCCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCEEEEEEEehhheeEEEEEE
Confidence 1156777899999888888875
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=169.67 Aligned_cols=262 Identities=16% Similarity=0.118 Sum_probs=170.3
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
+....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+.+++.
T Consensus 100 ~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~--------------------------~~~p~~a~~v~~ 146 (393)
T 3ov2_A 100 EEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG--------------------------IDMPGADYRLAT 146 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CCBSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CCCCCHHHHHHH
Confidence 45678999999999999999999888 889988642 112346889999
Q ss_pred HhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCC
Q 013946 170 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246 (433)
Q Consensus 170 ~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 246 (433)
.||+++. ++.++.+|+|++.||..|.++|++|.++.+||+|+|.+...+ .+|+. +.++..
T Consensus 147 ~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d--~~~~~~ 209 (393)
T 3ov2_A 147 LLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSF---------------RGPNE--GDFEAL 209 (393)
T ss_dssp HHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTC---------------CCCCT--TCHHHH
T ss_pred HcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhc---------------cCCcc--cchhhh
Confidence 9999874 689999999999999999999999999999999999842110 00110 001111
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC-----------CCCCCCh-----HHHHHHHHHHH
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM-----------TEPHPDG-----VGVILCIEKAL 308 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~-----------~~~~~~~-----~~~~~ai~~al 308 (433)
...+++||||+|+||++.+... -....+ ++...+... +.... ....+.- ..+..+++++|
T Consensus 210 ~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 287 (393)
T 3ov2_A 210 AGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERAL 287 (393)
T ss_dssp HHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHH
T ss_pred cccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 2467899999999998754210 011122 333222111 11000 0001111 12346899999
Q ss_pred HHcCCCC-CCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHHH-HHcCCcCC
Q 013946 309 AHSGVSR-EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQA-IRTGWIHP 384 (433)
Q Consensus 309 ~~agl~~-~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~-l~~~~ipp 384 (433)
+++|+++ +|| ++..|-.+. .=.+++.+.++-. .++..+ ..-..+||+.+|+=.+.|-.+... ++.|.+.|
T Consensus 288 ~~~gl~~~~di-~~v~Hq~n~-----~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~ 361 (393)
T 3ov2_A 288 APLGVREWNDV-FWVAHPGNW-----AIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTT 361 (393)
T ss_dssp GGGTCCSGGGS-EEEECCCCH-----HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT
T ss_pred HHcCCCcccCc-EEEECCCCh-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCC
Confidence 9999997 888 899995443 4456666666543 223221 234567999999877766665443 22233211
Q ss_pred CCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 385 NINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
- ...+.++..+||.|-+..+++|+.
T Consensus 362 G----------------------~~~d~vll~~fG~G~t~~~~ll~~ 386 (393)
T 3ov2_A 362 G----------------------DGLQWGVLLGFGPGLSIETVVLRS 386 (393)
T ss_dssp T----------------------TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred C----------------------CCCCeEEEEEECccceeeeeeeEE
Confidence 0 012567778999998988898875
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-18 Score=162.72 Aligned_cols=246 Identities=15% Similarity=0.080 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++..++ ...+..+..++..+
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 113 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPN-------------------------YRLPATAFVLQAEL 113 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 567999999999999999999888 8999876421 11234578999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|+. .+.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+.... . +++....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~-~~d~~~~ 170 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI----------------------D-PTDRSTS 170 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC----------------------C-TTCHHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC----------------------C-ccccccc
Confidence 993 58999999999999999999999999999999999999842111 0 1111235
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeeecc-------CCCCC--------------CCCCCCh--------HHH
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS-------DAYHM--------------TEPHPDG--------VGV 300 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~-------d~~~~--------------~~~~~~~--------~~~ 300 (433)
+++||||+|+||++.+. ...+...+...+... .+... .....++ ..+
T Consensus 171 ~lfGDGA~A~vl~~~~~----~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 246 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG----DAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAV 246 (354)
T ss_dssp TTBCCEEEEEEEEECCS----CCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHH
T ss_pred cccccceeEEEEeecCC----CCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHH
Confidence 78999999999987432 111112222111100 00000 0001122 234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 301 ~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
.++++++|+++|++++|||++..|..+.. =.+++.+.++-.. ++. ..-..+||+.+|+=.+.|..++. .
T Consensus 247 ~~~i~~~l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~~---~ 316 (354)
T 4efi_A 247 PKLVSRTLDIAGRDKDSYDAFLFHQANLF-----MLKHLAKKAGLPAERVP--VNIGEYGNTSCASIPLLITTELK---D 316 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHTTCCGGGSC--CCHHHHCBCGGGHHHHHHHHHSH---H
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHH-----HHHHHHHHhCcCHHHHH--HHHhhhCcHHHHHHHHHHHHHHH---h
Confidence 56789999999999999999999965543 3455666665331 222 23467899999986666554432 2
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 317 g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 317 RLK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp HHH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 111 112467778999998888888863
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.8e-18 Score=167.12 Aligned_cols=231 Identities=16% Similarity=0.144 Sum_probs=153.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..|.|.|+|..+|.- .+.+++.+.+ |.+ + .++ ..+.. +..+ .+..+ -.....|++.|+
T Consensus 2 ~~v~I~~ig~y~P~~~v~~~~l~~~~--g~~---~-~~~-~~g~G------~~~~---~~~~~-----~e~~~~La~~Aa 60 (450)
T 2f82_A 2 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKY-TIGLG------QDCL---AFCTE-----LEDVISMSFNAV 60 (450)
T ss_dssp CSCEEEEEEEECCSEEEEHHHHHHHT--TCC---T-TTT-TTTSC------CCEE---ECCCT-----TCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeeccHHHHHHHh--CCC---H-HHh-hhhhC------ceee---eeCCC-----CCCHHHHHHHHH
Confidence 368999999999987 5677766543 211 0 111 00000 0000 00001 122568999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC---C-CC
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW---M-GP 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-Gp 176 (433)
++||+++|+++++|+ .|++|+.... ......+..++..||+ + .+
T Consensus 61 ~~aL~~agi~~~~Id-------~li~~t~t~~-------------------------~~~p~~a~~v~~~lgl~g~~~~~ 108 (450)
T 2f82_A 61 TSLLEKYKIDPKQIG-------RLEVGSETVI-------------------------DKSKSIKTFLMQLFEKCGNTDVE 108 (450)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECCCCS-------------------------CSSSCHHHHHTHHHHTTTCCCCB
T ss_pred HHHHHHcCcCHHHCC-------EEEEEecCCC-------------------------CCCCcHHHHHHHHhCCcCCCCce
Confidence 999999999998777 7888876421 1123567889999998 3 47
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCC--CEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.++++|+|++.||..|.++|++|.+ +.+||+|+|.+. |+....+.++||
T Consensus 109 ~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~---------------------------~~~~~~~~~fGD 161 (450)
T 2f82_A 109 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV---------------------------YAEGPARPTGGA 161 (450)
T ss_dssp CCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC---------------------------CSSSTTGGGCEE
T ss_pred EEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc---------------------------ccCCCCCccccc
Confidence 899999999999999999999999998 999999999731 111235778999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC----CCCCCChH--------HHHHHHHHHHH------HcCCC
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM----TEPHPDGV--------GVILCIEKALA------HSGVS 314 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~----~~~~~~~~--------~~~~ai~~al~------~agl~ 314 (433)
||+|+||++.+. . .+.....|..... +.... ..+..++. .+..+++++++ ++|++
T Consensus 162 GA~A~ll~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~ 236 (450)
T 2f82_A 162 AAIAMLIGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFS 236 (450)
T ss_dssp EEEEEEEESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ceEEEEeccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCC
Confidence 999999986431 1 1222223333221 10111 11223342 34567888886 89999
Q ss_pred CCCccEEEeccCCCCCCCHHHHH
Q 013946 315 REDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||||+..|..+++..+.....
T Consensus 237 ~~did~~v~Hq~~~~i~~~~~~~ 259 (450)
T 2f82_A 237 INDADYFVFHSPYNKLVQKSFAR 259 (450)
T ss_dssp GGGCSEEEECCSSHHHHHHHHHH
T ss_pred hhhcCEEEecCChHHHHHHHHHH
Confidence 99999999999998877765443
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-17 Score=157.33 Aligned_cols=261 Identities=15% Similarity=0.118 Sum_probs=163.6
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 89 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 89 ~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
++....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+..++
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~--------------------------~~~p~~a~~v~ 139 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG--------------------------AHVPGVDFRLV 139 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CEESCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCcccHHHHHH
Confidence 346788999999999999999999888 889987641 11234688999
Q ss_pred HHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 169 MDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 169 ~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
..||+++. .+.++.+|+|++.||..|..+|++|.++.+||+|+|.+...+ .+++. +.++.
T Consensus 140 ~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d--~~~~~ 202 (387)
T 3oit_A 140 PLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF---------------TGPDE--GCFRT 202 (387)
T ss_dssp HHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC---------------CCCCS--SSCHH
T ss_pred HHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc---------------cCccc--cchHh
Confidence 99999873 688999999999999999999999999999999999842110 00110 01111
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccC--CCC-----CC------CCCCC-----hHHHHHHHHHH
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD--AYH-----MT------EPHPD-----GVGVILCIEKA 307 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--~~~-----~~------~~~~~-----~~~~~~ai~~a 307 (433)
....+++||||+|+||++.+. .......++.+.+.... ... .. ..... ...+..+++++
T Consensus 203 ~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~ 279 (387)
T 3oit_A 203 LLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDM 279 (387)
T ss_dssp HHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred hhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHH
Confidence 124678999999999987541 11112234444332211 100 00 00111 23455678888
Q ss_pred HHHc----CCCCCCcc--EEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 308 LAHS----GVSREDVN--YINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 308 l~~a----gl~~~dId--~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
|+++ |++ |+| ++..|-.+. .=.+++.+.++-.. ++..+ ..-..+||+.+|+=.+.|-.+ ++.
T Consensus 280 L~~~~~~~gl~--d~d~~~~v~Hq~n~-----~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~---~~~ 349 (387)
T 3oit_A 280 FGPLLGGDGGG--GWNDLFWAVHPGSS-----TIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDEL---RRQ 349 (387)
T ss_dssp TGGGCC--------GGGSEEEECCCCH-----HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH---HHC
T ss_pred HHhhcccCCCC--cccccEEEECCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHH---HHh
Confidence 9999 988 666 999995544 34555666665331 22221 234567999988866665543 222
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+.+. . .....+.++..+||-|-+..+++|+..
T Consensus 350 -~~~~G------------------~-~g~~~d~vll~~fG~G~t~~~~ll~~~ 382 (387)
T 3oit_A 350 -RKEAA------------------A-AGEWPELGVMMAFGPGMTVDAMLLHAT 382 (387)
T ss_dssp ------------------------------CCEEEEEEEETTTEEEEEEEEEC
T ss_pred -hhccC------------------C-CCCCCCEEEEEEecccceeeeeeeEec
Confidence 22110 0 000125677889999999999998753
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-16 Score=153.76 Aligned_cols=261 Identities=12% Similarity=0.087 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .||++++.+ ...+..+.+++..||
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~--------------------------~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT-------HMVSTTCTD--------------------------SANPGYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSC--------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCCCcHHHHHHHHhC
Confidence 57999999999999999999888 888888641 122345889999999
Q ss_pred CCC-C-ccee-cccchHHHHHHHHHHHHHHc----CCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 173 WMG-P-NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 173 l~G-p-~~~v-~~acas~~~Al~~A~~~i~~----G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
++. + .+.| +.+|++++.||..|..+|++ |.++.|||+++|.+.....+ ....... ..+.
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~~-------------~~~d 223 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDA-------------LQET 223 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHHH-------------HTCC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-ccccccc-------------cccc
Confidence 986 4 5788 79999999999999999997 99999999999984322211 1111000 0122
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-------------CCCC-----hHHHHHHHHHH
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------------PHPD-----GVGVILCIEKA 307 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------------~~~~-----~~~~~~ai~~a 307 (433)
....+++||||+|+||++.+... .....+..+.++........... ..+. ...+..+++++
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~ 302 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADL 302 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHH
Confidence 34568899999999998753210 00122234555433211110000 0011 13455778888
Q ss_pred HHH-------cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 308 LAH-------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 308 l~~-------agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
|++ +|++++||||+ .|--+. .=.+++.+.++-.. ++..+ ..-..+||+.+|+=.+.|-.+ ++
T Consensus 303 L~~~g~~L~~agl~~~DId~~-~Hqan~-----rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~---~~ 373 (465)
T 3e1h_A 303 LSSLQDQLPSSYQKPADFDWA-MHPGGA-----TILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL---RE 373 (465)
T ss_dssp HHHHGGGSCTTSCSGGGSEEE-ECCSSH-----HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH---TS
T ss_pred HHhccccccccCCCHHHceEE-ecCCCh-----HHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHH---HH
Confidence 887 67999999998 995443 44556666665321 11111 112345999888754444332 22
Q ss_pred c--CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 379 T--GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 379 ~--~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
. +.+.|. .+ ..+.++..+||-|=+..+++|+.
T Consensus 374 ~~~g~l~~G-------------------g~--~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 374 KDMDALAPG-------------------GK--VKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp TTTTSCSSS-------------------SC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred hcccccCCC-------------------CC--CCCEEEEEEEhHHHhhhheeeEE
Confidence 2 222110 00 12567778898877777777763
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.2e-16 Score=150.57 Aligned_cols=264 Identities=14% Similarity=0.137 Sum_probs=162.0
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+.|.|+|+|...|.- .+.+++.+.+ |.+. .++ ..... +.. ..+..+ -.....|+.+|+
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~----~~~-~~~~G------i~~---r~~~~~-----~e~~~~La~~Aa 64 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP----GKF-HIGIG------QDQ---MAVNPI-----SQDIVTFAANAA 64 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT----HHH-HTTTC------CCE---EECCCT-----TCCHHHHHHHHH
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH----HHH-HHHhC------ceE---EEECCC-----CCCHHHHHHHHH
Confidence 479999999999996 5777776543 2110 000 00000 000 000011 112568999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--Ccc
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNY 178 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~ 178 (433)
++||+++| +++|| .|++++..+. ......+..++..||+++ +++
T Consensus 65 ~~aL~~a~--~~~Id-------~li~~t~t~~-------------------------~~~ps~a~~v~~~LGl~~~~~~~ 110 (388)
T 3v4n_A 65 EAILTKED--KEAID-------MVIVGTESSI-------------------------DESKAAAVVLHRLMGIQPFARSF 110 (388)
T ss_dssp HTTCCHHH--HHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHhCC--cccCC-------EEEEEeccCC-------------------------CcCccHHHHHHHHcCCCCCceEe
Confidence 99999987 77777 7888876421 112345889999999975 788
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
.++.+|++++.||..|..+|++|.++.+||+++|.+... ++ ..+..++||||+|
T Consensus 111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~-------------------------~~-~~~~~lfGDGA~A 164 (388)
T 3v4n_A 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG-------------------------LN-SGGEPTQGAGAVA 164 (388)
T ss_dssp EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC-------------------------TT-CTTGGGCEEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc-------------------------CC-CCCCCccccceeE
Confidence 899999999999999999999999999999999983211 11 1135789999999
Q ss_pred EEecchHHHHhcCCeEEEEEEE-eeeccCCCCCCC------CCCCh--------HHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 259 LLLEELEHAKKRGAKIYAEFRG-GSFTSDAYHMTE------PHPDG--------VGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~------~~~~~--------~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
+||++.. .+...-.. .+...+...... +..++ ..+..+++++|+++|++++|||++..
T Consensus 165 ~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~ 237 (388)
T 3v4n_A 165 MLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAF 237 (388)
T ss_dssp EEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEE
T ss_pred EEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEe
Confidence 9998632 12211111 111112111001 11122 34557899999999999999999999
Q ss_pred ccCCCCCCCHHHH-------HHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 324 HATSTPAGDIKEY-------QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 324 h~~gt~~~D~~E~-------~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
|-......-..-. +.+.+.++... -+....-..+||+.+||=.+.|..++
T Consensus 238 Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~-e~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 238 HIPYTKMGKKALLAKISDQTEAEQERILARY-EESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp CCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH-HHHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHhcccHHHHHHhCCCH-HHHhhHHHhcCchHHHHHHHHHHHHH
Confidence 9744331111000 12222222110 01122345679999998666655543
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-14 Score=139.59 Aligned_cols=241 Identities=13% Similarity=-0.003 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|+++++.+ . ..+..+.+++..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~---------------------~-----~~P~~a~~v~~~ 182 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-------CLITSNSTT---------------------P-----ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSS---------------------C-----CSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCC---------------------C-----CcCHHHHHHHHH
Confidence 4668999999999999999999888 899988642 1 123457899999
Q ss_pred hCCCC--Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G--p~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++. +.+.+ +.+|+|++.||..|+++|++|.++.+||+|+|.+... .++ +++.
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~----------------------~~~-~d~~ 239 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT----------------------YQP-ADDT 239 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG----------------------CCS-SCCS
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc----------------------cCc-cccc
Confidence 99986 35677 9999999999999999999999999999999984211 011 1112
Q ss_pred C-----CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccC--CCCC-----------CCCCCC----hHHHHHHHH
Q 013946 248 D-----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD--AYHM-----------TEPHPD----GVGVILCIE 305 (433)
Q Consensus 248 ~-----G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--~~~~-----------~~~~~~----~~~~~~ai~ 305 (433)
. ..++||||+|+||++.+. .. ...++.+...... .... ...+.. -..+..+++
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~~----~~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~ 314 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRPR----PE-SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMW 314 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSCC----TT-EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhhhhcceeeccccEEEEEEecCC----CC-CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHH
Confidence 2 678999999999986432 01 1224444432211 1000 001111 123556888
Q ss_pred HHHH------HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHc--CC-CCcc-cccchhhhhhHhhhHHHHHHHHHHH
Q 013946 306 KALA------HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG--QN-RGLR-VNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 306 ~al~------~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~--~~-~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
++|+ ++|++ ||++..|-.+. .=.+++.+.++ -. .++. ....-. +||+.+|+=.+.|-.+.
T Consensus 315 ~~L~~~~~~~~~gl~---id~~v~Hq~~~-----~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~- 384 (413)
T 3v7i_A 315 EWLRVRYEDDPSSWH---PDVLLAHPGGT-----RVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH- 384 (413)
T ss_dssp HHHHHHTSSSCTTCC---CCEEEEECSSH-----HHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-
T ss_pred HHHhhccccccCCCc---eeEEEECCCCh-----HHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-
Confidence 9999 89987 99999995444 44566667776 32 2221 122334 79999888666555543
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+. .+ .+.+.++..+||.|=+..+++++
T Consensus 385 --~~-~~-------------------------~~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 --DA-GQ-------------------------KTGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp --HH-CC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --hC-CC-------------------------CCCCEEEEEEECHHHhHhhhheE
Confidence 22 11 01245677899987777777765
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=135.45 Aligned_cols=188 Identities=19% Similarity=0.156 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||++||+++++|| .||+|+... + ...+..++..+
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~---------------------q-------~~~A~~va~~L 99 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN---------------------Q-------NVTANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS---------------------S-------STTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC---------------------c-------hhHHHHHHHHh
Confidence 467999999999999999999888 889887531 0 11466677777
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
++ |.+.|+++|+|++.||..|..+|++|.++.+||+|+|.+........|.. ..+..+|.. ...
T Consensus 100 gi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~----------e~g~q~p~t----a~~ 163 (347)
T 3lma_A 100 KI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT----------EYGGQKPGT----ATS 163 (347)
T ss_dssp CC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred CC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc----------hhcccCCch----hcE
Confidence 54 89999999999999999999999999999999999998543211100000 001122322 233
Q ss_pred cccceeEEEecchHHHHhcCCeEEEEEEEee--eccCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGS--FTSDAYHMTEPHPDG----VGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i~a~i~g~~--~~~d~~~~~~~~~~~----~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
.++||+|+||++.. ..+ +|.+.. ...| .....+...+ .....+|.+.|+++|++|+|+|+|.+++
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgd 234 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGD 234 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCC
Confidence 46899999998542 222 233322 2222 1111111112 2345678999999999999999999754
Q ss_pred CCCCCCCHHHHHHHHHHHc
Q 013946 326 TSTPAGDIKEYQALIHCFG 344 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~ 344 (433)
.+. +-.+-+.+++.
T Consensus 235 L~q-----~g~~il~~l~~ 248 (347)
T 3lma_A 235 LSG-----VGSPILKDLLK 248 (347)
T ss_dssp CHH-----HHHHHHHHHHH
T ss_pred hHH-----HHHHHHHHHHH
Confidence 433 22233566664
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-14 Score=144.34 Aligned_cols=226 Identities=15% Similarity=0.162 Sum_probs=142.1
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..|.|.|+|..+|.- .+.+++.+.+ |.+. ..+ ..... +..+. +..+ -.....|+++|+
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~--g~~~----~~~-~~~~G------i~~r~---~~~~-----~e~~~~La~~Aa 81 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYD--GVDA----GKY-TIGLG------QAKMG---FCTD-----REDINSLCMTVV 81 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHH--TCCT----TCC-CCCCC------CCEEE---CCCT-----TCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEecHHHHHHHh--CCCh----hHh-ecccC------ceEEE---eCCC-----CCCHHHHHHHHH
Confidence 468999999999986 5777776553 2210 000 00000 11000 0011 122468999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC---CCC-C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG---WMG-P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg---l~G-p 176 (433)
++||+++|+++++|+ .|++++..+. ......+..++..|+ +.. +
T Consensus 82 ~~aL~~agi~~~dId-------~li~~T~t~~-------------------------~~~ps~a~~v~~~L~~lG~~~~~ 129 (478)
T 2p8u_A 82 QNLMERNNLSYDCIG-------RLEVGTETII-------------------------DKSKSVKTNLMQLFEESGNTDIE 129 (478)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECSCCS-------------------------CSSSCHHHHHGGGTTTTTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEccCCc-------------------------ccCccHHHHHHHHHhhcCCCCce
Confidence 999999999998887 7888876421 112345677885544 444 7
Q ss_pred cceecccchHHHHHHHHHHHHHHcCC--CCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGE--ANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~--~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.+.++|++++.||..|..+|++|. .+.+||+++|.. . |.......++||
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~-----------~~~~~~~~~fGd 182 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V-----------YATGNARPTGGV 182 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C-----------CCSSTTGGGCEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c-----------ccCCCCCCcccc
Confidence 78899999999999999999999999 999999999941 0 112224578999
Q ss_pred ceeEEEecchHHHHhcCCeEEEE-EEEeeeccCCCCCCC-------CCCChHHH-----------HHHHHHHHH------
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTE-------PHPDGVGV-----------ILCIEKALA------ 309 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~-i~g~~~~~d~~~~~~-------~~~~~~~~-----------~~ai~~al~------ 309 (433)
||+|+||++.+. .++.. +.|.. ..+...... +..++... ...+++.++
T Consensus 183 GA~A~Ll~~~~~------~~l~~~~~gs~-~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~ 255 (478)
T 2p8u_A 183 GAVALLIGPNAP------LIFERGLRGTH-MQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKE 255 (478)
T ss_dssp EEEEEEEESSCS------EEECTTCCEEE-ECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCC------ceEeeccceec-ccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 999999985321 01000 01211 111221111 11223211 134566666
Q ss_pred --HcCCCCCCccEEEeccCCCCCCCHH
Q 013946 310 --HSGVSREDVNYINAHATSTPAGDIK 334 (433)
Q Consensus 310 --~agl~~~dId~v~~h~~gt~~~D~~ 334 (433)
++|++++|||++..|..+..+.+..
T Consensus 256 ~~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 256 GNDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp TCCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred ccccCCChHHcCEEEecCCcHHHHHHH
Confidence 6799999999999998877655544
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-12 Score=128.93 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=135.3
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+.|.|+|+|..+|.- .+.+++.+.+ |.+ +.| +.... | +.. ..+.++. .....|++.|+
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~-----~~~----i~~~~-G-i~~---r~~~~~~-----E~~~~ma~~Aa 62 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVE-----AGK----YTVGL-G-QTR---MGFCSVQ-----EDINSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTC----CCCCC-C-CCE---EECCCTT-----CCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHh--CCC-----HHH----HHHhh-C-cEE---EEECCCC-----CCHHHHHHHHH
Confidence 579999999999998 5777765532 211 011 00000 0 000 0001111 12467999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC----C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG----P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----p 176 (433)
++||+++|++|++|| .|+++|.+. .......+..+...||+.| +
T Consensus 63 ~~al~~a~i~~~~Id-------~ii~aT~t~-------------------------~~~~ps~a~~v~~~l~~~g~~~~~ 110 (460)
T 2wya_A 63 QRLMERIQLPWDSVG-------RLEVGTETI-------------------------IDKSKAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGEE-------EEEEECSCC-------------------------SCSSSCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCC-------------------------CCCCCchHHHHHHHHhccCCCCee
Confidence 999999999998888 789998652 1223445778888887654 4
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccce
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa 256 (433)
++.+..+|++++.||..|..+|++|..+.++|+.+.... + -|.........|+||
T Consensus 111 a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~--------------~-----------~~~d~~~~~~~GdGA 165 (460)
T 2wya_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI--------------A-----------VYPSGNARPTGGAGA 165 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE--------------E-----------CCCSSTTGGGCEEEE
T ss_pred EechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc--------------c-----------ccccccccccCcchH
Confidence 578999999999999999999999987654444332211 0 022333456789999
Q ss_pred eEEEecchHHHHhcCCeEEEEEE---EeeeccCCCC-------CCCCCCChHH-------------------HHHHHHHH
Q 013946 257 GVLLLEELEHAKKRGAKIYAEFR---GGSFTSDAYH-------MTEPHPDGVG-------------------VILCIEKA 307 (433)
Q Consensus 257 aalvL~~~~~A~~~g~~i~a~i~---g~~~~~d~~~-------~~~~~~~~~~-------------------~~~ai~~a 307 (433)
+|++++..+. + ..+. +... .+... ...+..++.. ...+++++
T Consensus 166 ~A~l~~~~~~-------~-~~~~~~~~~~~-~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~ 236 (460)
T 2wya_A 166 VAMLIGPKAP-------L-ALERGLRGTHM-ENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQA 236 (460)
T ss_dssp EEEEEESSCS-------E-EECTTCCEEEE-CCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccCCc-------c-eeecccccccc-cchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999985321 1 1111 1111 11111 1111122211 12345566
Q ss_pred HHHcCCCCCCccEEEeccCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTP 329 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~ 329 (433)
+++++++++|+|++..|....+
T Consensus 237 l~~~~~~~~d~d~~v~Hqp~~r 258 (460)
T 2wya_A 237 GSDRPFTLDDLQYMIFHTPFCK 258 (460)
T ss_dssp TCCCCCCGGGCSEEEECCSSHH
T ss_pred HHHcCCCHHHHhhhhhcccchH
Confidence 6778999999999999976554
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=89.03 E-value=1.5 Score=42.12 Aligned_cols=100 Identities=10% Similarity=0.044 Sum_probs=58.3
Q ss_pred EEEEEeeeccCCCCC-CCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... .... +..+-..+++++||+++|++++|||.+.+ ++.++.. ...-..-+...++-....+..
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~-g~~~~~~~~~~~a~~~~~~lGl~~~~p~~ 85 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVII-GNVLQTGLGQNVARQIAINAGIPNSVPSY 85 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECCCCSSTTCCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCcchHHHHHHHHcCCCCCceEE
Confidence 457777665433322 1112 22344578999999999999999998765 3332221 112233344444432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =+..+++++..+..+..+++.|.
T Consensus 86 ~-----v~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 86 T-----VNKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp E-----ECCGGGHHHHHHHHHHHHHHTTS
T ss_pred E-----ccccchHHHHHHHHHHHHHhCCC
Confidence 1 14567788889999999998875
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=88.22 E-value=1.7 Score=41.69 Aligned_cols=100 Identities=8% Similarity=-0.068 Sum_probs=58.2
Q ss_pred EEEEEeeeccCCCCC-CCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... ..+.. ..+-..+++++||+++|++++|||.+.+ ++.++. ....-..-+...++-....+..
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~-g~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 87 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLL-GGVLTAGLGQNIARQIALGAGIPVEKPAM 87 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSCCTTSCSCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCCCCCchHHHHHHHHcCCCCCceEE
Confidence 457777665433321 11222 2344578999999999999999998765 332221 1122233344444432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..+++++..+..+...++.|.
T Consensus 88 ~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 88 TI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp EE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred Ee-----ccccHHHHHHHHHHHHHHhcCC
Confidence 21 3457788888888899998775
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=86.11 E-value=3.1 Score=39.70 Aligned_cols=100 Identities=8% Similarity=-0.115 Sum_probs=57.8
Q ss_pred EEEEEeeeccCCCCC-C-C-CCCChHHHHHHHHHHHHHc-CCCCCCccEEEeccCCCCCC--CHHHHHHHHHHHcCCCCc
Q 013946 276 AEFRGGSFTSDAYHM-T-E-PHPDGVGVILCIEKALAHS-GVSREDVNYINAHATSTPAG--DIKEYQALIHCFGQNRGL 349 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~-~-~~~~~~~~~~ai~~al~~a-gl~~~dId~v~~h~~gt~~~--D~~E~~al~~~~~~~~~~ 349 (433)
+.|.|.+.+.-+... . . ..+..+-..+++++||+++ |++++|||.+.+ |+.++.+ ...-..-+...++-....
T Consensus 4 v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~-g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 82 (387)
T 3goa_A 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYW-GCVQQTLEQGFNIARNAALLAEIPHSV 82 (387)
T ss_dssp EEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEE-ECSCCSBTTTTTHHHHHHHHTTCCTTS
T ss_pred EEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEE-EcccCCcccccHHHHHHHHHcCCCCCC
Confidence 356676655433322 1 1 1222345678999999999 999999998765 3332221 112222333334422122
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
|... =+...+|++..+..+..+++.|.
T Consensus 83 p~~~-----v~~aCss~l~Al~~A~~~I~sG~ 109 (387)
T 3goa_A 83 PAVT-----VNRLCGSSMQALHDAARMIMTGD 109 (387)
T ss_dssp CCEE-----EECGGGHHHHHHHHHHHHHHTTS
T ss_pred cEeE-----ecCcchHHHHHHHHHHHHHhCCC
Confidence 2221 24567788999999999999875
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=85.55 E-value=2.4 Score=40.57 Aligned_cols=100 Identities=9% Similarity=0.026 Sum_probs=57.9
Q ss_pred EEEEEeeeccCCCCC-CCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... ..+. ...+-..+++++||+++|++++|||.+.+ ++.++... ..-..-+...++-....+..
T Consensus 7 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~-g~~~~~~~~~~~a~~i~~~lGl~~~~p~~ 85 (394)
T 3ss6_A 7 VVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVIL-GHCIQRTDEANTARTAALAAGFPDTVTGY 85 (394)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSSCCGGGCSHHHHHHHHTTCCTTCEEE
T ss_pred EEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEE-EEccCCCccchHHHHHHHHcCCCCCceEE
Confidence 457776655433321 1112 22344578999999999999999998765 33332211 11223333334432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =+..++|++..+..+..+++.|.
T Consensus 86 ~-----v~~aCss~~~al~~A~~~I~~G~ 109 (394)
T 3ss6_A 86 T-----IQRQCSSGMQAIMSAAMQIQLGV 109 (394)
T ss_dssp E-----EECGGGHHHHHHHHHHHHHHHTS
T ss_pred E-----ecCcchHHHHHHHHHHHHHhCCC
Confidence 2 24567788888989999998875
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=84.03 E-value=2.2 Score=39.96 Aligned_cols=78 Identities=9% Similarity=-0.037 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+...+ ....++|+..+..+...
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v-----~~aC~s~~~al~~A~~~ 143 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLIN-TSVSRDYLEPSTASIVSGNLGVSDHCMTFDV-----ANACLAFINGMDIAARM 143 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-CCSCCSCSSSCHHHHHHHHHTCCTTCEEEEC-----CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCChHHHHHHHHhCCCCCceEEeE-----CCcCHHHHHHHHHHHHH
Confidence 44678999999999999999999765 44442 1222233445555654322232222 22466777778888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 144 i~~g~ 148 (345)
T 3s21_A 144 LERGE 148 (345)
T ss_dssp HHHTS
T ss_pred HHCCC
Confidence 88764
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=83.20 E-value=2.1 Score=39.88 Aligned_cols=78 Identities=17% Similarity=0.092 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+...+ +...++|+..+..+...
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v-----~~~C~s~~~al~~A~~~ 140 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIV-ATSTPDFVFPSTACLLQNKLGIRNHGAAFDV-----QAVCSGFAYAVATADSF 140 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSSSBSCHHHHHHHHTTCCSCCEEEEE-----ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCCcHHHHHHHHhCCCCCCcEEEe-----CcccHHHHHHHHHHHHH
Confidence 45678999999999999999998765 34443 1122234445555554222332222 34566777788888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 141 i~~g~ 145 (333)
T 4dfe_A 141 IRSGQ 145 (333)
T ss_dssp HHTTS
T ss_pred HHcCC
Confidence 88764
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=81.16 E-value=6.1 Score=37.82 Aligned_cols=100 Identities=17% Similarity=0.088 Sum_probs=58.4
Q ss_pred EEEEEeeeccCCCCCC-CCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC--HHHHHHHHHHHcCCCCccc
Q 013946 276 AEFRGGSFTSDAYHMT-EPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD--IKEYQALIHCFGQNRGLRV 351 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~-~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D--~~E~~al~~~~~~~~~~~v 351 (433)
++|.|.+.+.-+.... ... ...+-..+++++||+++|++++|||.|.. ++.+.... ..-...+...++-....+.
T Consensus 4 v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 82 (401)
T 1ulq_A 4 AWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYA-GCANQAGEDNRNVARMALLLAGFPVEVAG 82 (401)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred eEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecccCCCCCChHHHHHHHHhCCCCCccE
Confidence 4577776654333211 111 12344568899999999999999997654 44332211 1223344444553211222
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..+ .+.++||+..+..+...++.|.
T Consensus 83 ~~v-----~~aCas~~~Al~~A~~~I~~G~ 107 (401)
T 1ulq_A 83 CTV-----NRLCGSGLEAVAQAARAIWAGE 107 (401)
T ss_dssp EEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred eec-----cccchHHHHHHHHHHHHHHCCC
Confidence 221 3457788888999999999875
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=80.76 E-value=2.9 Score=39.34 Aligned_cols=78 Identities=17% Similarity=-0.029 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+... + +...++|+..+..+...
T Consensus 68 ~La~~Aa~~aL~~agi~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~----v-~~aC~s~~~al~~A~~~ 141 (354)
T 4efi_A 68 DLCRKAGEKLLAGLGWQADSIDALIF-VSQTPNYRLPATAFVLQAELDLPASCLALD----I-NLGCSGYPQALWLGMNL 141 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSCSSSCHHHHHHHHTTCCTTSEEEE----E-CCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCCcHHHHHHHHcCcCCCccEEe----e-CcccHHHHHHHHHHHHH
Confidence 34578999999999999999998765 34333 112222344455555422233222 2 34456777778888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 142 i~~g~ 146 (354)
T 4efi_A 142 IQTGA 146 (354)
T ss_dssp HHTTS
T ss_pred HHCCC
Confidence 88764
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=80.53 E-value=5.7 Score=37.88 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=57.5
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC--CCCHHHHHHHHHHHcCCCCccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP--AGDIKEYQALIHCFGQNRGLRV 351 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~--~~D~~E~~al~~~~~~~~~~~v 351 (433)
+.|.|.+.+.-+.+... .....+-..+++++||+++|++++|||.+.+ |+.+. .+. .-...+...++-....|.
T Consensus 10 v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~-g~~~~~~~~~-~~a~~va~~lgl~~~~p~ 87 (395)
T 2ib8_A 10 VVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYM-GNVLQGGEGQ-APTRQAVLGAGLPISTPC 87 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCTTSCS-CHHHHHHHHTTCCTTCCE
T ss_pred eEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCc-hHHHHHHHHcCCCCCceE
Confidence 46788776654432211 1122345567899999999999999998654 22211 111 122333444543111221
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..+ .+..+||+..+..+...++.|.
T Consensus 88 ~~v-----~~aCaS~~~Al~~A~~~I~~G~ 112 (395)
T 2ib8_A 88 TTI-----NKVCASGMKAIMMASQSLMCGH 112 (395)
T ss_dssp EEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred EEe-----cccccHHHHHHHHHHHHHHCCC
Confidence 111 3457788989999999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 433 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 8e-73 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 9e-70 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 2e-62 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 1e-59 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 5e-54 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 6e-54 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 2e-47 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 5e-44 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 2e-39 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 7e-38 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 1e-37 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 4e-37 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 6e-36 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 5e-34 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 3e-32 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 2e-31 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 227 bits (579), Expect = 8e-73
Identities = 107/252 (42%), Positives = 158/252 (62%), Gaps = 5/252 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G ++P+G + F+ L G SG+ I FD ++ P +IAAE+
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLD 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
+L +R+D+F+ Y L A + AL D G+ + +LD + G L+G+G+GGM+ +
Sbjct: 62 RKEL-RRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 142 AL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
+++PF +P NM SA +AM G+ GP+ ++ TACAT + +A I
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
GEA+++L GG++AA+ P+ +G F RALS RN +P KASRP+ ++RDGFVMGEGAGVL+
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 261 LEELEHAKKRGA 272
LE EHAKKRGA
Sbjct: 238 LEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 219 bits (558), Expect = 9e-70
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 4/252 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ + +
Sbjct: 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
+ K ++MD F+ Y + AG +A+ D G+ E + ++ G IGSG+GG+ + +
Sbjct: 62 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 118
Query: 142 ALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
+L +K++PF VP NM + L + G GP+ SI+TA + I +AA I
Sbjct: 119 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAY 178
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+G+GAG+L+
Sbjct: 179 GDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLV 238
Query: 261 LEELEHAKKRGA 272
LEE EHAKKRGA
Sbjct: 239 LEEYEHAKKRGA 250
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 200 bits (509), Expect = 2e-62
Identities = 107/252 (42%), Positives = 156/252 (61%), Gaps = 4/252 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F ++
Sbjct: 2 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
K +KRMD+F + + A ++A+ D + +NEL+ + GVLIG+G+GG+KV D
Sbjct: 62 DRKEAKRMDRFCHFAVCASQQAINDAKLV---INELNADEIGVLIGTGIGGLKVLEDQQT 118
Query: 142 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 200
L + +PF +P NM S + A++LG GPN TACA + I +A +
Sbjct: 119 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 178
Query: 201 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260
G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+G+L+
Sbjct: 179 GYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILI 238
Query: 261 LEELEHAKKRGA 272
LEELE A RGA
Sbjct: 239 LEELESALARGA 250
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 193 bits (490), Expect = 1e-59
Identities = 110/256 (42%), Positives = 156/256 (60%), Gaps = 5/256 (1%)
Query: 18 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 77
HMK RVVVTG G+ SP+G+ P+ F+N+L G GI I FD + F AAEI+ F
Sbjct: 5 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPF 64
Query: 78 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 137
D + K + R D + LY L A ++A+ + + L++ + GV++ SG+GG+K
Sbjct: 65 DKYFVKKDTNRFDNYSLYALYAAQEAVNHANLD---VEALNRDRFGVIVASGIGGIKEIE 121
Query: 138 DAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 196
D + L K++ P +P A NM S +AM G G SI+TAC++SN I +A
Sbjct: 122 DQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 181
Query: 197 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256
I G +VML GG++A++ P + GF A ALS DPT+AS P+D +R+GFVMGEG+
Sbjct: 182 SIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFDKDRNGFVMGEGS 240
Query: 257 GVLLLEELEHAKKRGA 272
G+L+LE LEHA+KRGA
Sbjct: 241 GMLVLESLEHAEKRGA 256
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 179 bits (454), Expect = 5e-54
Identities = 94/271 (34%), Positives = 145/271 (53%), Gaps = 19/271 (7%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--------------CTSFPTK 67
+RVVVTG+G+V+PLG + + L++G GI + D +K
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 68 IAAEIKSFSTDGWVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 124
+AA + S G L SK + F+ Y + A +AL D E +++ +
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 120
Query: 125 LIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 184
G G V + ++++PF +P NM S ++M G+ GPN++ TAC
Sbjct: 121 GGGIGSICDIVEAAQLI-CEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTAC 179
Query: 185 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPW 243
AT I +A I G+A+VM+ GG+++++ + + GF RALS + N P +ASRP+
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPF 239
Query: 244 DINRDGFVMGEGAGVLLLEELEHAKKRGAKI 274
D +RDGFV+GEG+GV++LEE EHAK+RGAKI
Sbjct: 240 DCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 178 bits (452), Expect = 6e-54
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K +T
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLID 61
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
+ D + L+ A + + G++ GSG G + +
Sbjct: 62 RKVVRFMSDASIYAFLSM---EQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 142 ALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 199
A+R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 200 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259
G+ +++ GG + + ++ N+ P KASR +D +RDGFV+ G G++
Sbjct: 179 LGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238
Query: 260 LLEELEHAKKRGAKI 274
++EELEHA RGA I
Sbjct: 239 VVEELEHALARGAHI 253
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 159 bits (403), Expect = 2e-47
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 234 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 293
+DP ASRP+D RDGFV+ EGA + +LE+ + A RGA+I+AE G + +AYHMT
Sbjct: 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGL 60
Query: 294 HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN 352
DG + I AL S D++YINAH + T D E A G++ R V+
Sbjct: 61 KADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS 120
Query: 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412
S KSM+GH LGA G++E A V A+ G + P NL D D + + +ER ++++
Sbjct: 121 SIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRS 179
Query: 413 ALSNSFGFGGHNSSIIFSPY 432
L+ GFGG S+++
Sbjct: 180 VLTVGSGFGGFQSAMVLRDA 199
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 149 bits (376), Expect = 5e-44
Identities = 68/159 (42%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 275 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 334
YAE G + DA+H+T+P DG G +L + +AL SG+ ++Y+NAHATSTP GD
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 335 EYQALIHCFGQNRGLR---VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391
E +A+ F ++ +STK GHLLGAAGAVEAI + AI G +N++NP
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
D + D + +++ V+ A+SNSFGFGG N+S++F+
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 136 bits (344), Expect = 2e-39
Identities = 80/162 (49%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332
KIY E G + T DAYH+T P PDG G I AL SG+ E V+YINAH TSTPA D
Sbjct: 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAND 60
Query: 333 IKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391
+ E +A+ G + + V+STKSM GHLLG +G +EA+A V AI + P INLENP
Sbjct: 61 VTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENP 120
Query: 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
D D + + G + V ALSNSFGFGGHN ++ F Y+
Sbjct: 121 DPECDLDYVPGQSRAL-IVDVALSNSFGFGGHNVTLAFKKYQ 161
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 132 bits (334), Expect = 7e-38
Identities = 76/159 (47%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332
KIYAE G +SDAYHMT P +G G L + AL +G+ + Y+NAH TSTPAGD
Sbjct: 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD 60
Query: 333 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391
E QA+ FG+ + V+STKSM GHLLGAAGAVE+I + A+R + P INL+NP
Sbjct: 61 KAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 120
Query: 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
D D + + ++ ++ L NSFGFGG N S+IF
Sbjct: 121 DEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK 159
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 133 bits (335), Expect = 1e-37
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 4/198 (2%)
Query: 235 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPH 294
DP +A P+D G+V GEG +L+LE+ A+ RG + + + +
Sbjct: 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDA--YGELAGCASTFDPAPGS 58
Query: 295 PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNST 354
G+ I AL +G EDV+ + A P D E +A I G+ V
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARA-IGRVFGREGVPVTVP 117
Query: 355 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414
K+ G L G ++ + + ++R G I P + + ++++G + + AL
Sbjct: 118 KTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTAL 176
Query: 415 SNSFGFGGHNSSIIFSPY 432
+ G G NS+ + +
Sbjct: 177 VLARGRWGFNSAAVLRRF 194
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 132 bits (333), Expect = 4e-37
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 81
+RVV+TG+G+ +P G+ F+ L G + I FD + + +++AAE
Sbjct: 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60
Query: 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 141
P+ RMD+ + + ++A A G+ D ++ + ++ Y +
Sbjct: 61 GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLS 120
Query: 142 ----ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 197
+ ++ + ++ A +A +G GP +ST C + + NA
Sbjct: 121 DSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRA 180
Query: 198 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRN 233
I G A+VM G +D + PI + F A RA + RN
Sbjct: 181 IEEGSADVMFAGAADTPITPIVVACFDAIRATTARN 216
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 127 bits (320), Expect = 6e-36
Identities = 85/159 (53%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332
+IYAE G ++DA+H+TEPHP+G G L + +AL +G++ E V YINAH TSTP GD
Sbjct: 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGD 60
Query: 333 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391
E A+ FG + + L V+STKSMIGHLLGAAGAVEAIA VQA+ G I P INLE+P
Sbjct: 61 RAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP 120
Query: 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
D +D + + P+ +V ALSNSF FGGHN+ + F
Sbjct: 121 DPELDLDFV--PEPREAKVDYALSNSFAFGGHNAVLAFK 157
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 122 bits (307), Expect = 5e-34
Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 274 IYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333
I AE G T DAYHMT PHP+G G I I+ AL + +S E V Y+NAH TSTPA +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 334 KEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393
E A++ G+ + V+STKS GHLLGAAGAVEAI ++A+R ++
Sbjct: 62 GESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSD 119
Query: 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 433
++ NV+ G E+ E+ A+SN+FGFGGHN+ + F ++
Sbjct: 120 YIEANVVYGQGLEK-EIPYAISNTFGFGGHNAVLAFKRWE 158
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 117 bits (295), Expect = 3e-32
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 275 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 334
YAE G TSD M P +G + C++ A+ ++Y+N+H TSTP GD+K
Sbjct: 1 YAEIVGYGATSDGADMVAPSGEGA--VRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVK 55
Query: 335 EYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394
E A+ FG +++TK+M GH LGAAG EAI + + G+I P+IN+E D
Sbjct: 56 ELAAIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQ 114
Query: 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430
+V +R E+ +SNSFGFGG N++++
Sbjct: 115 AAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVMR 149
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 117 bits (293), Expect = 2e-31
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 24 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAP 83
V++TG+G+V+P G +++ +L+G G+ + FD + +P +A +I F +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 61
Query: 84 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL 143
+L + D LTA AL D + + + D + G + +
Sbjct: 62 RLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVT--ANACGGFDFTHREFRKLW 119
Query: 144 RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA 203
K ++ + + + +++ G GP+ ++ A + +A I RG
Sbjct: 120 SEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-T 178
Query: 204 NVMLCGGSDAAVIPIGLGGFVACRALS 230
+++ GG D+A+ P G +A +S
Sbjct: 179 PLVVSGGVDSALDPWGWVSQIASGRIS 205
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 433 | |||
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.72 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.53 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.47 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.44 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.44 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.33 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.25 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.24 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.21 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.13 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.1 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.08 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.06 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.05 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.03 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.74 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.44 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.9 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.85 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.53 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 95.08 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 94.15 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 94.03 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 92.34 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 87.48 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 82.74 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 82.08 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 80.92 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 80.27 |
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.7e-50 Score=367.45 Aligned_cols=249 Identities=44% Similarity=0.758 Sum_probs=233.9
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
++||||||||+++|.|.+.++||++|++|+++++++++|+...++..+++.+++++...++++++.++++|+++|++.++
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
.+||+|||+.++ ..+..++||++|++.++....+.....+ ......++|..++..+.|.++++|++.||++||+++
T Consensus 81 ~~Al~dAg~~~~---~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t 157 (250)
T d2gfva1 81 VQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS 157 (250)
T ss_dssp HHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHhcCCCcc---ccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence 999999999875 5667899999999999988887777665 456678899999999999999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|..++.|+..+.+|+..|||||.+++|+++|||++++
T Consensus 158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~l 237 (250)
T d2gfva1 158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEEE
T ss_pred cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEEE
Confidence 99999999999999999999999999999999998999999999999999988877888999999999999999999999
Q ss_pred EecchHHHHhcCC
Q 013946 260 LLEELEHAKKRGA 272 (433)
Q Consensus 260 vL~~~~~A~~~g~ 272 (433)
|||++++|++||+
T Consensus 238 VLE~~~~A~~rGA 250 (250)
T d2gfva1 238 VLEEYEHAKKRGA 250 (250)
T ss_dssp EEEEHHHHHHHTC
T ss_pred EECcHHHHHHCcC
Confidence 9999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.6e-49 Score=362.63 Aligned_cols=248 Identities=43% Similarity=0.787 Sum_probs=228.5
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
|+||||||||+++|.|.+.++||++|++|++++.++++|+...++....+.+ ++.+..++++++.+++|+++++++.++
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCccccccc-cccccccccHHHHhhCCHHHHHHHHHH
Confidence 5689999999999999999999999999999999999998888877776665 455556688999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
++||+|||++++ +++.+|||||+|++.++......+.... ..+...++|..++....|..+++|++.||++||+++
T Consensus 80 ~~Al~dAGl~~~---~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t 156 (249)
T d1j3na1 80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST 156 (249)
T ss_dssp HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred HHHHHHcCCChh---HcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence 999999999986 5667899999999999998887776655 556778899999999999999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||.+|+++|++|++|++||||+|...+|..+..|...+.|+..+..|++.|||||.+++|+++||||+++
T Consensus 157 v~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~l 236 (249)
T d1j3na1 157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVL 236 (249)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEE
T ss_pred cccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEEE
Confidence 99999999999999999999999999999999998999999999999999988887888999999999999999999999
Q ss_pred EecchHHHHhcCC
Q 013946 260 LLEELEHAKKRGA 272 (433)
Q Consensus 260 vL~~~~~A~~~g~ 272 (433)
|||++++|++||+
T Consensus 237 vLe~~~~A~~rGA 249 (249)
T d1j3na1 237 VLEAYEHAKKRGA 249 (249)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEccHHHHHHCcC
Confidence 9999999999985
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.3e-49 Score=349.15 Aligned_cols=198 Identities=38% Similarity=0.590 Sum_probs=187.1
Q ss_pred CCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 013946 234 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 313 (433)
Q Consensus 234 ~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl 313 (433)
++|++.|||||.+++||++|||++++|||+.++|+++|++||++|.|++.++|+.+.+.+.|++..+.++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 35889999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 392 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~ 392 (433)
+++||+||++|||||+.+|.+|+++|.++|+.. .+++|+++|+++||+++|||++++++++++|++|+|||++|+++++
T Consensus 81 ~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 160 (205)
T d1tqya2 81 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSD 160 (205)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBB
T ss_pred CccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCC
Confidence 999999999999999999999999999999864 4689999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 393 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|.+++++++. +.+.+++|++++|+|||||+|+|+||+++
T Consensus 161 p~~~~~~v~~-~~~~~~~~~a~~~s~GfGG~na~~vl~~~ 199 (205)
T d1tqya2 161 PECDLDYVPL-EARERKLRSVLTVGSGFGGFQSAMVLRDA 199 (205)
T ss_dssp TTBCSCCCBS-SCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCcccCCC-CCcCCCCCEEEEeCCCCCceeEEEEEeeC
Confidence 9998876543 46677899999999999999999999975
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.1e-47 Score=351.44 Aligned_cols=249 Identities=43% Similarity=0.764 Sum_probs=232.8
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
++||||||||+++|.|.+.++||++|++|+++++++++|+...++....+.++.+.....+++++.+++++++++++.++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 80 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence 47999999999999999999999999999999999999999888888889998887777789999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 179 (433)
.+||++||+.++ .+..+++++++|++.+.......+...+ ..+....+|..++....+..+.++++.||++||+++
T Consensus 81 ~~Al~~Agl~~~---~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (250)
T d1e5ma1 81 QQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 157 (250)
T ss_dssp HHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCCChH---hhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence 999999999876 6677899999999999888887777666 456677888888899999999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||.+|+++|++|++|++||||+|..+++..+..|.+++.|+..+.+|+..|||||.+++|+++|||++++
T Consensus 158 v~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa~~~ 237 (250)
T d1e5ma1 158 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEE
T ss_pred ccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeEEEE
Confidence 99999999999999999999999999999999998999999999999999988888999999999999999999999999
Q ss_pred EecchHHHHhcCC
Q 013946 260 LLEELEHAKKRGA 272 (433)
Q Consensus 260 vL~~~~~A~~~g~ 272 (433)
|||++++|++||+
T Consensus 238 vLe~l~~A~~rGA 250 (250)
T d1e5ma1 238 ILEELESALARGA 250 (250)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEeeHHHHHHCcC
Confidence 9999999999985
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.1e-48 Score=341.15 Aligned_cols=193 Identities=27% Similarity=0.455 Sum_probs=177.5
Q ss_pred CCCCCCccccCCCCCcccccceeEEEecchHHHHhcCC-eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 013946 235 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 313 (433)
Q Consensus 235 ~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~-~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl 313 (433)
+|+..|||||.+++||++|||++++|||++++|++||+ +||++|.|++.++|+.+.. +.+. ++.++|++||+++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~~~--g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GRPA--GLERAIRLALNDAGT 77 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CCCC--SHHHHHHHHHHHHTC
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cchh--hhhhhhhhhcccccc
Confidence 47889999999999999999999999999999999997 6999999999999987653 2333 578899999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
+++||+||++|||||+.+|.+|.++|.++|+.. .++|+++|+++||+++|||++++++++++|++|+|||++|+++|++
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~-~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~ 156 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPR 156 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCG
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhcc-ccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCc
Confidence 999999999999999999999999999999865 5899999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++.+++. .+++.++++++++|+|||||+|+|+||++|
T Consensus 157 ~~~~~~v~-~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 157 EYGIDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp GGCCEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccCccccC-CCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 98887644 356677899999999999999999999998
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-43 Score=326.21 Aligned_cols=250 Identities=35% Similarity=0.539 Sum_probs=217.1
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
|+||||||||+++|+|.++++||++|++|+++++++++|+...++......+.. ....++.....+.+++..++.+.++
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKL-DTTGLIDRKVVRFMSDASIYAFLSM 79 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCC-CCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCcccccccccc-cccccccchhhccchhhhhhhhHHH
Confidence 568999999999999999999999999999999999888777777776666643 4445578889999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH--HhhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL--RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
.+|++++++..+. .....|+|+++|+..++..........+ .++....+|+.++....+..+++|++.||++||++
T Consensus 80 ~~a~~~~~l~~~~--~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~ 157 (253)
T d2vbaa1 80 EQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (253)
T ss_dssp HHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHHhhccchh--ccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence 9999999998642 3356789999999998877665554444 23456678888899999999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCccccccee
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
+|+++|+||+.||.+|+++|+.|++|++||||+|... +..+..|..++.++.. +.+|+..|||||.+++|+++|||++
T Consensus 158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~-~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa~ 236 (253)
T d2vbaa1 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC-WEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (253)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-HHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeeccchhHHHHHHHHHHhcchhccceeeecchhhhh-cchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeEEE
Confidence 9999999999999999999999999999999999854 4456678888877753 5578899999999999999999999
Q ss_pred EEEecchHHHHhcCCeE
Q 013946 258 VLLLEELEHAKKRGAKI 274 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i 274 (433)
++|||++++|++||++|
T Consensus 237 ~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 237 MVVVEELEHALARGAHI 253 (253)
T ss_dssp EEEEEEHHHHHHTTCCC
T ss_pred EEEEccHHHHHHccCcC
Confidence 99999999999999875
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=1.2e-41 Score=288.92 Aligned_cols=160 Identities=50% Similarity=0.770 Sum_probs=151.0
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 351 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v 351 (433)
+||++|+|+++++|+++.+.+.|++.++.++|++||+++|++|+||+||++|||||+.+|.+|..+|+++|++. .+++|
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999864 36899
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++....+ .+.+.+.++++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCc-CcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 99999999999999999999999999999999999999999999877644 35667789999999999999999999999
Q ss_pred CC
Q 013946 432 YK 433 (433)
Q Consensus 432 ~~ 433 (433)
|+
T Consensus 160 y~ 161 (161)
T d1e5ma2 160 YQ 161 (161)
T ss_dssp CC
T ss_pred eC
Confidence 96
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.5e-41 Score=285.77 Aligned_cols=158 Identities=44% Similarity=0.686 Sum_probs=149.9
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+||++|+|++.++|+++.+.|+|++.++.++|++||++++++|+|||||++|||||+.+|..|..+|+++|+. .++++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~--~~~v~ 78 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK--EVPVS 78 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS--SSEEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC--cccCc
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999986 48999
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++|+++||+++|||++++++++++|+++++||++|+++|+|.++.++++ .+.+.++++++++|||||||+|+|+||++|
T Consensus 79 s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 79 STKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCccccc-CccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 9999999999999999999999999999999999999999999887654 356667889999999999999999999999
Q ss_pred C
Q 013946 433 K 433 (433)
Q Consensus 433 ~ 433 (433)
+
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=6.7e-40 Score=304.53 Aligned_cols=251 Identities=40% Similarity=0.676 Sum_probs=202.8
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCC--CCC------------CccccccccCCCCCCCCChhh--
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--TSF------------PTKIAAEIKSFSTDGWVAPKL-- 85 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--~~~------------~~~~~~~i~~~~~~~~i~~~~-- 85 (433)
+||||||||+++|+|.++++||++|++|++++++++.+++ ..| +.++.+.++.+.....+..+.
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 4899999999999999999999999999999999865433 222 123344444333322223332
Q ss_pred -hhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchH
Q 013946 86 -SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMG 163 (433)
Q Consensus 86 -~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (433)
..++++....+..+..+|+.+++....+ .....++++.++...+............ ........|+.++....+..
T Consensus 81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (270)
T d2ix4a1 81 NSKAVANFIGYAVCAADEALRDAEWLPTE--EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA 158 (270)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHHTTCCCCS--HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhcccc--ccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence 3457778888899999999999875432 2233456777666665555444433333 44566778888999999999
Q ss_pred HHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCcc
Q 013946 164 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRP 242 (433)
Q Consensus 164 a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~p 242 (433)
+++|+++||++||+++|+++|+|++.||.+|+++|++|+||++||||+|..+.|..+..|...+.|+.. +.+|+..|||
T Consensus 159 a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rP 238 (270)
T d2ix4a1 159 SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238 (270)
T ss_dssp HHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCT
T ss_pred HHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999864 4668889999
Q ss_pred ccCCCCCcccccceeEEEecchHHHHhcCCeE
Q 013946 243 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKI 274 (433)
Q Consensus 243 fd~~~~G~~~geGaaalvL~~~~~A~~~g~~i 274 (433)
||.+++|+++|||++++|||++++|++||++|
T Consensus 239 FD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 99999999999999999999999999999875
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.4e-40 Score=279.10 Aligned_cols=160 Identities=48% Similarity=0.734 Sum_probs=147.2
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 351 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v 351 (433)
+||++|+|++.++|+.+.+.|.|++.++.++++++|++++++|+||+|||+|||||+.+|.+|..+|+++|+.. .++++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999864 46899
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
++.|+++||+++|||++++++++++|++++|||++|+++|++.+..........+..+++++++|||||||+|+|+||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 99999999999999999999999999999999999999999988776544433334457999999999999999999997
Q ss_pred C
Q 013946 432 Y 432 (433)
Q Consensus 432 ~ 432 (433)
.
T Consensus 161 ~ 161 (161)
T d2gfva2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=1.8e-39 Score=275.64 Aligned_cols=157 Identities=44% Similarity=0.721 Sum_probs=147.6
Q ss_pred EEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC---CCccc
Q 013946 275 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLRV 351 (433)
Q Consensus 275 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~---~~~~v 351 (433)
|++|+|+++++|+++++.|+|++.++..+|+++|++++++|+||+|||+|||||+++|.+|+.+++++|+.. .++++
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 799999999999999999999999999999999999999999999999999999999999999999999753 46899
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+++|+++||+++|||++++++++++|+++++||++|+++|+|.++....+....++..+|++++|||||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 99999999999999999999999999999999999999999999877655555666778999999999999999999986
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-39 Score=275.68 Aligned_cols=158 Identities=53% Similarity=0.813 Sum_probs=147.7
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 351 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v 351 (433)
+||++|+|+++++|+.+.+.|+|++.++.++++++|+++|++|+||||||+|||||+.+|.+|..+|+++|+.. .+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999753 46889
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
++.|+++||+++|||++++++++++|++++|||++|+++|+++++..+.. +++..+++++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~--~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC--cccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 99999999999999999999999999999999999999999998876543 4556678999999999999999999997
Q ss_pred C
Q 013946 432 Y 432 (433)
Q Consensus 432 ~ 432 (433)
.
T Consensus 159 v 159 (159)
T d1j3na2 159 V 159 (159)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=9.7e-38 Score=278.40 Aligned_cols=205 Identities=23% Similarity=0.368 Sum_probs=191.3
Q ss_pred CEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 102 (433)
Q Consensus 23 ~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~~ 102 (433)
.|||||||+++|+|.++++||++|++|+++++++++|+...++..+.+++++|+...++++++.+.++|++++++.++.+
T Consensus 1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 80 (208)
T d1tqyb1 1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADW 80 (208)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHH
T ss_pred CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhccccccccccccccc
Confidence 38999999999999999999999999999999999999999999999999988887778899999999999999999999
Q ss_pred HHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcceec
Q 013946 103 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 181 (433)
Q Consensus 103 Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~ 181 (433)
||+|||++++ .+...++++++|++.++....++.+..+ ....+..+|+.++....|..+++|+..||++||+++|+
T Consensus 81 Al~~Ag~~~~---~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~ 157 (208)
T d1tqyb1 81 ALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALV 157 (208)
T ss_dssp HHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEE
T ss_pred cchhhhcccc---cccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeecc
Confidence 9999999986 5667899999999999999888877776 45567788888889999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhc
Q 013946 182 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ 231 (433)
Q Consensus 182 ~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~ 231 (433)
++|+|++.||..|+++|+.| +|++||||+|..++|..+.+|.+++.||+
T Consensus 158 tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 158 AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred ccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 99999999999999999999 99999999999999999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.6e-36 Score=269.11 Aligned_cols=208 Identities=27% Similarity=0.414 Sum_probs=183.6
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
+||||||||+++|.|.++++||++|++|++++++++.|+...+...+...++.+...+++++++.+.+++.++|++.++.
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~ 80 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR 80 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcccCcchhhHHHHHH
Confidence 58999999999999999999999999999999999998887776666555543333445899999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhh-------cccCCCCcccccccchHHHHHHHHhCCC
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-------YKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
+||+|||++++ .+...+++++++++.++.....+.+..+... .....++.++...++.++.++++.||++
T Consensus 81 ~Al~dAg~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~ 157 (216)
T d1tqya1 81 EAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE 157 (216)
T ss_dssp HHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHhcCCcc---ccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCcc
Confidence 99999999986 5667899999999999998888877766332 2345666777778899999999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 232 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~ 232 (433)
||+++++++|+|++.||.+|+++|++|++|++||||+|..++|..+.+|.+++.||.+
T Consensus 158 Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 158 GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999854
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.3e-36 Score=251.99 Aligned_cols=151 Identities=38% Similarity=0.640 Sum_probs=135.8
Q ss_pred EEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccc
Q 013946 275 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNST 354 (433)
Q Consensus 275 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~ 354 (433)
|++|+|++.++|+.+++. |+++++.++|+++|+++ +.|||||++|||||+++|.+|..+|+++|++. .++|++.
T Consensus 1 Yaei~G~g~~~Dg~~~ta--P~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~-~~~v~s~ 74 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISAT 74 (151)
T ss_dssp CEEEEEEEEEECCSCTTS--CCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC-CCEEECT
T ss_pred CEEEEEEEEecCCCCCCC--cCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC-Ccccccc
Confidence 799999999999988765 56788999999999876 57899999999999999999999999999865 5789999
Q ss_pred hhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 355 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 355 k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|+++||+++|||++++++++++|+++++||++|++++++++.... +..+.++++++++++|||||||+|+|+||+|.
T Consensus 75 K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~v 151 (151)
T d2vbaa2 75 KAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN-IVTETTDRELTTVMSNSFGFGGTNATLVMRKL 151 (151)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE-ECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred hhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccccccc-ccCcCcCCCCCEEEEeCCcccceeEEEEEEEC
Confidence 999999999999999999999999999999999999999765433 33456667899999999999999999999973
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=1.8e-16 Score=152.12 Aligned_cols=257 Identities=13% Similarity=0.096 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+..|+++||+++|+++++|| .||++++.+ ...+..+.+|+..
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId-------~lI~~t~t~--------------------------~~~P~~a~~v~~~ 137 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG--------------------------FIAPGVDVAIVKE 137 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC--------------------------CCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCC--------------------------CCCchHHHHHHhh
Confidence 3557999999999999999999888 677776531 1224568899999
Q ss_pred hCCCCCc--ceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGPN--YSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp~--~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++... +.+. .||++++.||..|..+|++|..+.+||+++|...... .. .+ . ++...
T Consensus 138 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~-----------~~----~d---~-~~~~~ 198 (372)
T d1teda_ 138 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------VF----AD---D-INDVV 198 (372)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------CC----CS---S-HHHHH
T ss_pred hccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccc-----------cC----CC---c-chhhh
Confidence 9998643 3343 5899999999999999999999999999999632110 00 00 0 00111
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeecc-C-CCCC-----------CCCCCC-----hHHHHHHHHHHHH
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS-D-AYHM-----------TEPHPD-----GVGVILCIEKALA 309 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~-d-~~~~-----------~~~~~~-----~~~~~~ai~~al~ 309 (433)
..+++||||+|+||++.+...... .....+.+..... . .... ....+. ...+..+++++|+
T Consensus 199 ~~~lfGDGAaA~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 277 (372)
T d1teda_ 199 IHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLW 277 (372)
T ss_dssp HHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccceeEEeccCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999998654322111 1122333322211 1 0000 000111 2346788999999
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCC
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 387 (433)
++|++++|||++..|..+.. =.+.+.+.++-.. +++. ...-..+||+.+||=.+.| -..++++.+
T Consensus 278 ~~gl~~~did~~i~Hq~~~~-----i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L---~~~l~~g~~----- 344 (372)
T d1teda_ 278 DNGLQISDIDLWAIHPGGPK-----IIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---ETMVQQAES----- 344 (372)
T ss_dssp HTTCCGGGCSCEEECCSCHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---HHHHHSCSS-----
T ss_pred hcCCCHHHhhhhhccCccHH-----HHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHH---HHHHHhCCC-----
Confidence 99999999999999976543 3444555565331 2211 1123456998776533322 233444222
Q ss_pred CCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
....+.++..+||-|=+...++|+..
T Consensus 345 -------------------~~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 345 -------------------AKAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp -------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred -------------------CCCCCEEEEEEEcHHHhHHHHhheee
Confidence 11235667778887766777888754
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.47 E-value=1.1e-13 Score=118.13 Aligned_cols=118 Identities=20% Similarity=0.305 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++.. +.......+..++..+
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId-------~li~~s~~-------------------------~~~~~p~~a~~v~~~l 105 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID-------LVVVSTMT-------------------------NFVHTPPLSVAIAHEL 105 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSC-------------------------CCCCSSCHHHHHHHHH
T ss_pred HHHHhHHHHHhhhhhccCChhHCe-------EEEEeccC-------------------------CccccccHHHHHHHhh
Confidence 567999999999999999999887 77887754 2223345578899999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
+.+. .++.++.+|++++.||..|..+|++|.++.+||+++|.. ++. + .++.....+
T Consensus 106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~-s~~----------~------------~~~d~~~~~ 162 (181)
T d1mzja1 106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------I------------DLADRSLSF 162 (181)
T ss_dssp TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------S------------CSSCTTTTT
T ss_pred cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccc-ccc----------C------------CCCCcceEE
Confidence 9864 788999999999999999999999999999999999973 111 1 122334567
Q ss_pred ccccceeEEEecch
Q 013946 251 VMGEGAGVLLLEEL 264 (433)
Q Consensus 251 ~~geGaaalvL~~~ 264 (433)
++||||+|+||++.
T Consensus 163 lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 163 LFGDGAGAAVVGPS 176 (181)
T ss_dssp TBCEEEEEEEEEEE
T ss_pred EeeeeeEEEEEEeC
Confidence 89999999999864
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=1.6e-13 Score=116.30 Aligned_cols=119 Identities=20% Similarity=0.297 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++... ....+..+..++..|
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id-------~li~~s~~~-------------------------~~~~P~~a~~v~~~L 98 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIG-------LIVVATTSA-------------------------THAFPSAACQIQSML 98 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred chHHHHHHHHHhhhhccccccccc-------EEEEecCCc-------------------------cccccchhhhhhhcc
Confidence 467999999999999999999888 788887642 223456688999999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|++. +++.|+.+|++++.||..|..+|++|.++.+||+++|... .. +. ++.....+
T Consensus 99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S-~~----------~~------------~~d~~~~~ 155 (174)
T d1hnja1 99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------CD------------PTDRGTII 155 (174)
T ss_dssp TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------SC------------TTCHHHHT
T ss_pred CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh-cc----------cC------------CCCCCeEE
Confidence 9986 7899999999999999999999999999999999999721 11 11 11112346
Q ss_pred ccccceeEEEecchH
Q 013946 251 VMGEGAGVLLLEELE 265 (433)
Q Consensus 251 ~~geGaaalvL~~~~ 265 (433)
++||||+|+||++.+
T Consensus 156 lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 156 IFGDGAGAAVLAASE 170 (174)
T ss_dssp TBCCEEEEEEEEEES
T ss_pred EeceeeEEEEEEeCC
Confidence 789999999999754
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.44 E-value=2.1e-13 Score=115.30 Aligned_cols=119 Identities=17% Similarity=0.278 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+..|+++||+++|++|++|| .||+++.. +....+..+..++..|
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId-------lli~~s~t-------------------------~~~~~p~~a~~v~~~L 96 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD-------AVIVATNT-------------------------PDALFPDTAALVQARF 96 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE-------EEEEECSS-------------------------CSEEESCHHHHHHHHT
T ss_pred ccHHHHHHHHHHHhhcCcccccce-------EEEEeccc-------------------------ccccccchHHHHHHHh
Confidence 568999999999999999998887 67777654 2234456688899999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
|.+.+++.|+.+|++++.+|..|..++++|.++.+||+++|... .. +. ++.....++
T Consensus 97 g~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S-~~----------~~------------~~d~~~~~l 153 (172)
T d1ub7a1 97 GLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-KI----------ID------------WNDRATAVL 153 (172)
T ss_dssp TCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GT----------SC------------TTCHHHHTT
T ss_pred ccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccc-cc----------cC------------CCCcCeEEE
Confidence 99889999999999999999999999999999999999999731 10 00 122234567
Q ss_pred cccceeEEEecchH
Q 013946 252 MGEGAGVLLLEELE 265 (433)
Q Consensus 252 ~geGaaalvL~~~~ 265 (433)
+||||+|+||++.+
T Consensus 154 fGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 154 FGDGGGAAVVGKVR 167 (172)
T ss_dssp BCCEEEEEEEECCC
T ss_pred ecceeEEEEEEEcC
Confidence 89999999998754
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.33 E-value=1.1e-11 Score=111.53 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..|+..+++++|++ +|++|++|| .|++|..... ......++..++...
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~Id-------~vi~G~v~~~------------------------~~~g~n~aR~~al~a 79 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQT------------------------LEQGWNIARMASLMT 79 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBS------------------------BTTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhcCCCCHHHee-------EEEEEeeccc------------------------ccccccchhhhHhhh
Confidence 46888899999995 999999898 8999976421 111233566777777
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
|+- -|.++|+..|+||+.||..|++.|++|++|++|+||+|.+.
T Consensus 80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS 125 (262)
T d1wdkc1 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125 (262)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETT
T ss_pred hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccc
Confidence 764 38899999999999999999999999999999999999654
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.25 E-value=4.1e-11 Score=108.08 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+..+.+++|+++|++|++|| .|++|+... ..-...++.+++...|
T Consensus 28 ~dL~~~~~~~~l~~~~i~~~~Id-------~vi~G~~~~-------------------------~~~~~n~ar~~al~ag 75 (268)
T d1m3ka1 28 HELGATVISAVLERAGVAAGEVN-------EVILGQVLP-------------------------AGEGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------TTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCc-------EEEEeeccc-------------------------cCcchHHHhHHHHHhC
Confidence 46889999999999999999888 899998641 1112345777888888
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
+. -|.++|+..|+||+.||..|++.|++|++|++|+||+|.+.
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS 120 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEST
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccc
Confidence 85 37899999999999999999999999999999999999865
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.24 E-value=1.3e-11 Score=106.63 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+..|+++||+++|+++++|| .|++.++.+ .. .+..+..+...+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-------~lI~~s~t~-------------------------~~-~P~~aa~v~~~l 121 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-------VIIYVSCTG-------------------------FM-MPSLTAWLINEM 121 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-------EEEEECSSS-------------------------CC-SSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-------eEEEeccCC-------------------------CC-cchhHHHHHHHH
Confidence 457999999999999999999888 777776531 11 234677899999
Q ss_pred CCCCC--ccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC-
Q 013946 172 GWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR- 247 (433)
Q Consensus 172 gl~Gp--~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~- 247 (433)
|++.. .+.+ ..+|++++.+|..|..+|++|..+.+||+++|....- .+|-|.+.
T Consensus 122 g~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~~----------------------~~~~d~~~~ 179 (200)
T d1u0ma1 122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLC----------------------YQPTDLGVG 179 (200)
T ss_dssp TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGG----------------------CCTTCCSHH
T ss_pred hcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEeccccc----------------------cCCCCCChh
Confidence 99763 4555 5799999999999999999999999999999973211 11111111
Q ss_pred ---CCcccccceeEEEecc
Q 013946 248 ---DGFVMGEGAGVLLLEE 263 (433)
Q Consensus 248 ---~G~~~geGaaalvL~~ 263 (433)
...++||||+|+||.+
T Consensus 180 ~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 180 SLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHBCEEEEEEEEET
T ss_pred hhhcccccccccEEEEEec
Confidence 1346899999999975
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.21 E-value=7.4e-11 Score=106.90 Aligned_cols=92 Identities=16% Similarity=0.189 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+..+++++|+++|+++++|| .|++|+.... ......++..++...|
T Consensus 25 ~dL~~~a~~~al~~~~i~~~~Id-------~vi~G~v~~~------------------------g~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 25 DDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQA------------------------GEDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCS------------------------STTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence 45788999999999999999888 8999976421 1112345777888888
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
+- -|.++|+..|+||+.||..|++.|++|+.|++|+||+|.+.
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS 118 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMS 118 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESS
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccc
Confidence 83 38899999999999999999999999999999999999754
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.13 E-value=2.5e-10 Score=100.88 Aligned_cols=89 Identities=15% Similarity=0.104 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+..|+++||+++|+++++|| .||++++++ ...+.. ...+...+
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t~-------------------------~~~p~~-~a~~~~~l 148 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSG-------------------------VDMPGA-DYQLTKLL 148 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC-------------------------CCSSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc-------EEEEecccC-------------------------CccCcc-HHHHHHHH
Confidence 457999999999999999999888 888887642 122233 44566667
Q ss_pred CCCCCc--c-eecccchHHHHHHHHHHHHHHcCCCCEEEEecccC
Q 013946 172 GWMGPN--Y-SISTACATSNFCILNAANHIIRGEANVMLCGGSDA 213 (433)
Q Consensus 172 gl~Gp~--~-~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~ 213 (433)
++.... + .+..+|++++.+|..|..+|++|..+.+||+++|.
T Consensus 149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~ 193 (235)
T d1bi5a1 149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV 193 (235)
T ss_dssp TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee
Confidence 665432 3 35779999999999999999999999999999997
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.10 E-value=9.7e-11 Score=90.95 Aligned_cols=121 Identities=17% Similarity=0.277 Sum_probs=89.9
Q ss_pred CCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCc
Q 013946 271 GAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGL 349 (433)
Q Consensus 271 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~ 349 (433)
|.+++++|.+++...- .|...+.+...+++++|+++|++.+|||+||.|-.... -.-+..+.++-. .++
T Consensus 2 gl~plAri~~~a~~g~-----~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~-----q~l~~~~~l~id~~kv 71 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-----QALYCIHKLGIDLNKV 71 (124)
T ss_dssp TCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCGGGB
T ss_pred CCcEEEEEEEEEEEec-----CHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhH-----HHHHHHHHcCCChhhc
Confidence 5678999999987632 23444567789999999999999999999999965542 233334445432 357
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEE
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 429 (433)
+++..--.+|||.||||...++.++..|+++ ++++.+...-||.-.++|+
T Consensus 72 N~~GGaiAlGHP~GaSGarlv~~l~~~L~~~------------------------------~~glas~C~ggG~G~a~~i 121 (124)
T d1afwa2 72 NPRGGAIALGHPLGCTGARQVATILRELKKD------------------------------QIGVVSMCIGTGMGAAAIF 121 (124)
T ss_dssp STTCCHHHHCBCTTTHHHHHHHHHHHHSCTT------------------------------CEEEEEEEETTTEEEEEEE
T ss_pred cccCccceecCCcCCchHHHHHHHHHHhccC------------------------------CEEEEEEcccCCcEEEEEE
Confidence 7777777889999999999999998877531 3556666666777788888
Q ss_pred cc
Q 013946 430 SP 431 (433)
Q Consensus 430 ~~ 431 (433)
++
T Consensus 122 er 123 (124)
T d1afwa2 122 IK 123 (124)
T ss_dssp EE
T ss_pred Ee
Confidence 76
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.08 E-value=1.3e-10 Score=97.26 Aligned_cols=160 Identities=11% Similarity=0.108 Sum_probs=105.4
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 102 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~~ 102 (433)
|-|.|+|..+|.- .+.+++.+.. |.+. ..+ .+..+...+ .+..+. .....|++.|+++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~~-~~i--~~~~Gi~~r-----------~~~~~~-----E~~~~ma~~Aa~~ 60 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKF--LIGIGQTEM-----------AVSPVN-----QDIVSMGANAAKD 60 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHH--HTTTCCSEE-----------EECCTT-----CCHHHHHHHHHHT
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh--CCCH-HHH--HHhcCcEEE-----------EeCCCc-----cCHHHHHHHHHHh
Confidence 7799999999998 5777766542 2210 000 000111000 001111 1245689999999
Q ss_pred HHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--Cccee
Q 013946 103 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYSI 180 (433)
Q Consensus 103 Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~~v 180 (433)
+|++.+ ++++| -+++++.. +....+..+..+...+|++. .++.+
T Consensus 61 al~~~~--~~~id-------~li~~t~~-------------------------~~~~~p~~a~~v~~~lg~~~~~~~~dv 106 (166)
T d1xpma1 61 IITDED--KKKIG-------MVIVATES-------------------------AVDAAKAAAVQIHNLLGIQPFARCFEM 106 (166)
T ss_dssp TCCHHH--HHHEE-------EEEEECSS-------------------------CSBSSSCHHHHHHHHTTCCSSCEEEEE
T ss_pred hhcccc--CCCCC-------eEEEeccc-------------------------cccccchhHHHHHHhhccccceEEeee
Confidence 887643 55555 45666543 22334566888999999964 57889
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+.+|++++.||..|..+|++|..+.+||++.|..... ++ ..+-+.+||||+|+|
T Consensus 107 ~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~-------------------------~~-~~~~~~fGDGA~A~l 160 (166)
T d1xpma1 107 KEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG-------------------------LN-SGGEPTQGAGAVAMV 160 (166)
T ss_dssp ESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC-------------------------TT-CSSGGGCEEEEEEEE
T ss_pred cccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc-------------------------CC-CCCCccCCCeeEEEE
Confidence 9999999999999999999999999999999852100 01 112256899999999
Q ss_pred ecch
Q 013946 261 LEEL 264 (433)
Q Consensus 261 L~~~ 264 (433)
|++.
T Consensus 161 l~~~ 164 (166)
T d1xpma1 161 IAHN 164 (166)
T ss_dssp EEES
T ss_pred EecC
Confidence 9863
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=6.7e-10 Score=86.17 Aligned_cols=121 Identities=22% Similarity=0.305 Sum_probs=89.3
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC---CCCc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGL 349 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~---~~~~ 349 (433)
+++++|+++..... .|...+.+...+++++|+++|++++|||+||.|-.... ..-+..+.++- ...+
T Consensus 1 KPlA~i~~~~~~g~-----~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAa-----q~l~~~~~~~l~~d~~kv 70 (125)
T d1ulqa2 1 RPLARVRAIAVAGV-----PPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAA-----QALAVLREWSLSMEDQRL 70 (125)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCTTCTTB
T ss_pred CCeEEEEEEEEEec-----CHHHHhhccHHHHHhHhhccCcCccccchheeccccch-----hHHHHHHHhhccCchhhc
Confidence 36789999887632 23333445678999999999999999999999954432 22222333321 2357
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEE
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 429 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 429 (433)
+++..--.+|||+||||+..++.++..|++. +.++++++...-||...++++
T Consensus 71 N~~GGaIAlGHP~GASGari~~tl~~~L~~~----------------------------~~~~G~as~C~gGG~g~A~~i 122 (125)
T d1ulqa2 71 NPNGGAIALGHPLGASGARILTTLVHEMRRR----------------------------KVQFGLATMCIGVGQGIAVVV 122 (125)
T ss_dssp STTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEEEEE
T ss_pred CCCCCcccccCCccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeEEEE
Confidence 7777777899999999999999999999861 235777777778888999999
Q ss_pred cc
Q 013946 430 SP 431 (433)
Q Consensus 430 ~~ 431 (433)
|+
T Consensus 123 E~ 124 (125)
T d1ulqa2 123 EG 124 (125)
T ss_dssp EE
T ss_pred Ee
Confidence 86
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.05 E-value=4.4e-10 Score=87.09 Aligned_cols=121 Identities=20% Similarity=0.233 Sum_probs=92.1
Q ss_pred eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc
Q 013946 273 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 351 (433)
Q Consensus 273 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v 351 (433)
+|+++|.++....- .|...+.+...+++++|+++|++.+|||+||.|-.+. .-.-+..+.++-. ..+++
T Consensus 2 ~Plari~~~a~~g~-----dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA-----~q~la~~~~l~id~~kvN~ 71 (124)
T d1m3ka2 2 QPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFA-----AQACAVNKDLGWDPSIVNV 71 (124)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBH-----HHHHHHHHHHCCCGGGBST
T ss_pred CcEEEEEEEEEEec-----ChHHhccchHHHHHHHHHHcCCChhcccHHHhcccch-----hheeeehHhhCCChhhcCC
Confidence 46789999887532 2333445678899999999999999999999995544 2333444555533 35777
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+...-.+|||+||||+..+..++..|++ . +.++++++...-||...++++|+
T Consensus 72 ~GGaiAlGHP~GaSGarl~~tl~~~L~~---------------------~-------~~~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 72 NGGAIAIGHPIGASGARILNTLLFEMKR---------------------R-------GARKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp TCCHHHHCCCTTTHHHHHHHHHHHHHHH---------------------H-------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCccccccCcCccchhHHHHHHHHHHh---------------------c-------CCCEEEEEecccccceeEEEEEe
Confidence 7777789999999999999999999976 1 23577777777888999999986
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.03 E-value=4.8e-10 Score=87.48 Aligned_cols=123 Identities=17% Similarity=0.253 Sum_probs=89.9
Q ss_pred CCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC----
Q 013946 271 GAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---- 346 (433)
Q Consensus 271 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~---- 346 (433)
|.+++++|++++.... .|...+.+...+++++|+++|++.+|||+||.|-... ...-+..+.++..
T Consensus 1 Gl~pla~i~~~~~~g~-----dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA-----~q~l~~~~~~~~~~~~~ 70 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA-----AQALPVLKDLKVLDKMN 70 (128)
T ss_dssp TCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH-----HHHHHHHHHTTCGGGHH
T ss_pred CCCEEEEEEEEEEEec-----CHHHhccCcHHHHHHHhhhcCccccccceEEeecccc-----hhhhhhhhhcccccCCc
Confidence 4578899999987632 2333345668899999999999999999999995432 2222222222211
Q ss_pred CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeee
Q 013946 347 RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSS 426 (433)
Q Consensus 347 ~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~ 426 (433)
.+++++...-.+|||+||||+..++.++..|++. +.++++++...-||...+
T Consensus 71 ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~----------------------------~~~~Glas~C~gGG~g~A 122 (128)
T d1wdkc2 71 EKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------GGTFGLSTMCIGLGQGIA 122 (128)
T ss_dssp HHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEE
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeE
Confidence 2466777777789999999999999999999761 235777777778889999
Q ss_pred eEEcc
Q 013946 427 IIFSP 431 (433)
Q Consensus 427 ~vl~~ 431 (433)
+++++
T Consensus 123 ~~iEr 127 (128)
T d1wdkc2 123 TVFER 127 (128)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99986
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.74 E-value=1.9e-08 Score=90.21 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhC----CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 93 MLYLLTAGKKALADG----GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 93 ~~l~l~aa~~Al~dA----gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
..|+..+.+++|+++ +++|++|| .|++|+... ......++.+++
T Consensus 36 ~~L~~~~i~~~l~r~~~~~~idp~~Id-------~vi~G~v~~-------------------------~g~~~~~aR~~a 83 (269)
T d1afwa1 36 DYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLN-------------------------VGAGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSS-------------------------BGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCChhhcC-------EEEeccccc-------------------------cccccccchhhh
Confidence 456777888888754 69998888 789997531 111234577778
Q ss_pred HHhCCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCc
Q 013946 169 MDLGWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 215 (433)
Q Consensus 169 ~~lgl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~ 215 (433)
...|+. -|.++|+..|+||+.||..|++.|++|+.|++|+||+|.+.
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS 132 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMT 132 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccc
Confidence 788873 49999999999999999999999999999999999999853
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.44 E-value=0.00052 Score=54.73 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
.+.++++++|+++|++++|||++..|..+ ..-.+++.+.++-...-.+...-..+||+.+|+=.+.|.. +++
T Consensus 49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~---a~~ 120 (148)
T d1u6ea2 49 KMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAE---LLT 120 (148)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHH---HHH
Confidence 34578999999999999999999999544 3456677777764321112234557799988875555444 444
Q ss_pred cCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 379 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 379 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+. +-...+..+||.|=+-+++|++
T Consensus 121 ~g~i~-------------------------~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 121 TGAAK-------------------------PGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp HTSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCC-------------------------CCCEEEEEEEchhhhheEEEEe
Confidence 44331 1346666788877667777764
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.90 E-value=0.0027 Score=50.50 Aligned_cols=97 Identities=20% Similarity=0.214 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
+..+|+++|+++|++++|||++..|..+. .=.+.+.+.++-.... +...-..+||+.+|+=.+.| ...++.
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~-----~~~~~i~~~lgi~~~k-~~~~~~~~Gn~~sasip~~L---~~~~~~ 119 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQANL-----RIIDAARERLGLPWER-VAVNVDRYGNTSTASIPLAL---KEAVDA 119 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSCH-----HHHHHHHHTTTCCGGG-BCCCHHHHCBCGGGHHHHHH---HHHHHH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccch-----HHHHHHHhhccchhhH-HHHHHHHhcCCcchhHHHHH---HHHHHc
Confidence 34789999999999999999999995443 3445555555432111 12233467999888754443 344444
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+ .+-+.++..+||.|-+..++|++
T Consensus 120 ~~~-------------------------~~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 120 GRI-------------------------REGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp TSS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEchHhhhEEEEEE
Confidence 333 12346677789988777777764
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.85 E-value=0.0049 Score=48.50 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
+.++++++|+++|++++|||++..|..+. .=.+.+.+.++-... .+...-..+||+.+|+=.+.|-. .++.
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~-----~~~~~~~~~l~l~~~-k~~~~~~~~GN~~sasip~~L~~---~~~~ 116 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANL-----RIISATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALDE---AVRD 116 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCH-----HHHHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHH---HHHT
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCch-----HHHHHHHHhCccchh-hhhhhhhhhcccccchHHHHHHH---HHHh
Confidence 45789999999999999999999996554 345556666654321 12233456799988875544433 4444
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+ .+-+.++..+||.|=+.++++++
T Consensus 117 ~~~-------------------------~~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 117 GRI-------------------------KPGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp TCS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEehhhhhEEEEEE
Confidence 332 12345667788887666666664
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.53 E-value=0.011 Score=47.08 Aligned_cols=62 Identities=18% Similarity=0.263 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAA 365 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~as 365 (433)
.+.++++++|+++|++++|||++..|..+ ..-.+.+.+.++-...-.+...-..+||+.+||
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~-----~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sas 110 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQAN-----LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSAS 110 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHH
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCc-----HHHHHHHHHHhCCCchhcchhhhhhcCCcccch
Confidence 45578999999999999999999999554 455666666676432211222335578887775
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.08 E-value=0.027 Score=44.32 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAA 365 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~as 365 (433)
..+..+++++|+++|++++|||++..|-.+. .-.+.+.+.++-.. .++. ...-..+||+.+|+
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~-----~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sas 107 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGP-----RILDDLSTFLEVDPHAFRFSRATLTEYGNIASAV 107 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHH-----HHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCH-----HHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcch
Confidence 4567889999999999999999999995444 45566666665321 2211 11224569998887
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.15 E-value=0.24 Score=38.76 Aligned_cols=109 Identities=11% Similarity=0.060 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..+...+++.|+++|++.+|||++..|- +...=++++.+.++-. ..++.+ .+-..+|.+-+||=..-|-....
T Consensus 42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hq-----gg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~ 116 (154)
T d1bi5a2 42 KNITKALVEAFEPLGISDYNSIFWIAHP-----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRK 116 (154)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSSEEEECC-----SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccccceEeecc-----ccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHH
Confidence 4566789999999999999999999994 4445666777777633 122221 22345688888764444433332
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.- ...+.. ........++..+||.|=+...++|++.
T Consensus 117 ~~---~~~~~~------------------~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 117 KS---TQNGLK------------------TTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp HH---HHTTCS------------------BTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hh---hccCCc------------------ccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 22 111111 0111235677789998878888888763
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=94.03 E-value=0.27 Score=38.79 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..+...+++.|+++|++.+|||++.+|- +...=++++.+.++-. ..+..+ .+-..+|.+-+||=..-|-....
T Consensus 47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hq-----gg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~ 121 (160)
T d1ee0a2 47 KNIENAAEKALSPLGITDWNSVFWMVHP-----GGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK 121 (160)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECC-----SSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCccccceEeecC-----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHh
Confidence 4566788999999999999999999994 4445566677776533 233221 33445688888875444443332
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++...+.. ........++..+||.|=+-..++|++.
T Consensus 122 ---~~~~~~~~------------------~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 122 ---RSMAEGKS------------------TTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp ---HHHHTTCS------------------BTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---hhhhcCCC------------------CcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 21111110 1111245778889998888888888864
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=92.34 E-value=0.74 Score=35.92 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..+...+++.|++++++.+|||++..|--|. .=++++.+.++-.. ++..+ .+-..+|.+-+|+=...|-.+..
T Consensus 43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~-----~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~ 117 (156)
T d1u0ua2 43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGR-----AILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRK 117 (156)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCH-----HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhhCceEeecCCcH-----HHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHH
Confidence 4566889999999999999999999995444 55666666665332 22221 12345688877764443333322
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.-+ ..+.. ......+.++..+||-|=+...++|++.
T Consensus 118 ~~~---~~~~~------------------~~~~~~~~~~~~gfG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 118 ASL---QNGCS------------------TTGEGLEMGVLFGFGPGLTIETVVLKSV 153 (156)
T ss_dssp HHH---HHTCS------------------BSBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred hhh---hccCC------------------CcCCCCCEEEEEEECHHHhHHHHHHeeC
Confidence 211 10100 1111246777889998878888888763
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=87.48 E-value=0.33 Score=39.76 Aligned_cols=77 Identities=21% Similarity=0.063 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
-..+|++++|+++|++++|||++... +.|...-+.=...+...++-...+... .+.+...++++..+-.+.-.++
T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~~~~~~~----~i~~~gC~g~~~al~~A~~~l~ 152 (200)
T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFDSTTRQI----PIAQLGCAAGGAAINRAHDFCT 152 (200)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCCTTCEEE----EECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcCCCeeEe----ccccchhhHHHHHHHHHHHHHH
Confidence 34679999999999999999998653 444322222222233333322112111 1123334445555555555566
Q ss_pred cC
Q 013946 379 TG 380 (433)
Q Consensus 379 ~~ 380 (433)
.+
T Consensus 153 ~~ 154 (200)
T d1u0ma1 153 AY 154 (200)
T ss_dssp HS
T ss_pred hC
Confidence 54
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=82.74 E-value=1 Score=35.64 Aligned_cols=46 Identities=20% Similarity=0.093 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHc
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFG 344 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~ 344 (433)
.-..++.+++|+++|++|+|||+|.... .|+ ...+.-...+.+.++
T Consensus 51 ~ma~~Aa~~aL~~agi~~~dIdlli~~s-~t~~~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 51 DLAFKAVEDLLRRHPGALEGVDAVIVAT-NTPDALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEEC-SSCSEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhcCcccccceEEEEec-ccccccccchHHHHHHHhc
Confidence 4566899999999999999999987653 343 223334445555565
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| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=80.92 E-value=2.2 Score=33.67 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN 346 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~ 346 (433)
-..++.++||++++++++|||++....+.....-+.-...+.+.++-.
T Consensus 54 la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~ 101 (174)
T d1hnja1 54 MGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101 (174)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC
Confidence 456899999999999999999877643322222344455566666643
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| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=80.27 E-value=1.6 Score=34.69 Aligned_cols=47 Identities=23% Similarity=0.268 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcC
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQ 345 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~ 345 (433)
.-..+|.+++|+++|++++|||+|..+ +.++. .-+.-...+...++.
T Consensus 60 ~ma~~Aa~~aL~~a~~~~~dId~li~~-s~~~~~~~p~~a~~v~~~l~~ 107 (181)
T d1mzja1 60 VMGVAASRRALEHAGVDPAEIDLVVVS-TMTNFVHTPPLSVAIAHELGA 107 (181)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEE-CSCCCCCSSCHHHHHHHHHTC
T ss_pred HHhHHHHHhhhhhccCChhHCeEEEEe-ccCCccccccHHHHHHHhhcC
Confidence 345689999999999999999998765 33332 223334445555553
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