Citrus Sinensis ID: 013955
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 433 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJU7 | 437 | Purple acid phosphatase 1 | yes | no | 0.995 | 0.986 | 0.758 | 0.0 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.896 | 0.894 | 0.624 | 1e-145 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.958 | 0.949 | 0.580 | 1e-137 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.944 | 0.957 | 0.580 | 1e-137 | |
| Q949Y3 | 475 | Bifunctional purple acid | no | no | 0.856 | 0.781 | 0.439 | 7e-88 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.944 | 0.877 | 0.420 | 9e-88 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.935 | 0.869 | 0.412 | 2e-85 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.942 | 0.877 | 0.426 | 3e-85 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.856 | 0.771 | 0.450 | 3e-84 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.900 | 0.840 | 0.428 | 2e-81 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/431 (75%), Positives = 371/431 (86%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
Query: 363 KNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEK 422
K+P P+WSVFREASFGHGEL++VNSTHA W+WHRNDDDEP RSD++W+ SLV+SGC+ ++
Sbjct: 367 KDPSPEWSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNSGCLKKR 426
Query: 423 SRELRKILMSP 433
+ELRK+L+ P
Sbjct: 427 PQELRKMLLEP 437
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/389 (62%), Positives = 290/389 (74%), Gaps = 1/389 (0%)
Query: 26 QPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAE 85
QP R + F + + S PQQVHISLAG HMRVT+IT+D SVVEYG PG Y+ A
Sbjct: 30 QPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKAT 89
Query: 86 GESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITFAVAGDL 145
GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG GPEF FKTPP+ FP+ FA+ GDL
Sbjct: 90 GECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGDL 149
Query: 146 GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205
GQT WT +TL HI YDV LLPGDLSYAD Q WD+FG LV+PLAS RPWMVT+GNH
Sbjct: 150 GQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGNH 209
Query: 206 EKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQY 264
E E P+I F+SYNARW MP ES S SNLYYSFDVAG H +MLGSY D+D SDQY
Sbjct: 210 EIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQY 269
Query: 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGH 324
+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG+ M ME LL+ A VD+V +GH
Sbjct: 270 QWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGH 329
Query: 325 VHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKI 384
VHAYER RV N K DPCG ++ITIGDGGN+EGLA +K P S FRE+SFGHG LK+
Sbjct: 330 VHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLKV 389
Query: 385 VNSTHAFWSWHRNDDDEPVRSDQLWITSL 413
++ A WSWHRN+D + +D++W+ SL
Sbjct: 390 MDGKRAHWSWHRNNDSNSLLADEVWLDSL 418
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/422 (58%), Positives = 297/422 (70%), Gaps = 7/422 (1%)
Query: 9 AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDD 64
+ F+S V A Y RP PR L +P +PQQVHISLAG HMRVT+ TDD
Sbjct: 14 SLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVTYTTDD 72
Query: 65 ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
+ S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRCG G
Sbjct: 73 LNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRCGGHGD 132
Query: 125 EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q WD+
Sbjct: 133 EFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDS 192
Query: 185 FGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLYYSFDV 243
FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLYYSFDV
Sbjct: 193 FGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDV 252
Query: 244 AGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG 303
AG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH GEG+
Sbjct: 253 AGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEK 312
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYK 363
M + +E LLY A VD+V AGHVH YER + N K DPCG +YITIGDGGN+EGLA ++K
Sbjct: 313 MRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGLALRFK 372
Query: 364 NPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS-LVSSGCVAEK 422
PQ S FRE+SFGHG L+I++ A WSWHRN+D+ +D++ S SS C + +
Sbjct: 373 KPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNNDEMSSIADEVSFESPRTSSHCHSNR 432
Query: 423 SR 424
R
Sbjct: 433 YR 434
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/422 (58%), Positives = 301/422 (71%), Gaps = 13/422 (3%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357
E + M ME LLY A VDLV AGHVHAYER RV K D CG VYI IGDGGN EG
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEG 363
Query: 358 LARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVS-S 416
LA KY++P P+ S+FREASFGHG+L + N+THA W WHRNDDD V D +W+TSL++ S
Sbjct: 364 LATKYRDPNPEISLFREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWLTSLLADS 423
Query: 417 GC 418
C
Sbjct: 424 SC 425
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 244/398 (61%), Gaps = 27/398 (6%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWS 370
AGHVHAYERS R++N + PD VYIT+GDGGN+EGLA ++ PQPD+S
Sbjct: 347 AGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYS 406
Query: 371 VFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQL 408
FREAS+GH L I N THA + W+RNDD + V +D+
Sbjct: 407 AFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEF 444
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 7 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 324 bits (830), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 189/449 (42%), Positives = 267/449 (59%), Gaps = 40/449 (8%)
Query: 1 MELKFVLTAFVFIS-ATV----TTAEYIR-PQPRRTLEFPWDPKPSSH--PQQVHISLAG 52
M + +L FVF+S ATV TT+ ++R QP + P P+ H P+QVHI + G
Sbjct: 1 MRMNKILLVFVFLSIATVINSGTTSNFVRTAQPSTEMSLETFPSPAGHNAPEQVHI-VQG 59
Query: 53 DSHMR---VTWITD-DESSPSVVEYGTSPGG----YNCGAEGESTSYRYLFYRSGKIHHT 104
D + R ++W+T + + +VV Y + G ++SYR+ Y SG +HH
Sbjct: 60 DYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHA 119
Query: 105 VIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-I 158
I LE+DT Y Y G G +F F +PP P TF + GDLGQT + TL H +
Sbjct: 120 TIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYM 179
Query: 159 GQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
K L PGDLSYAD + Q +WD++G V+P A+ + ++ GNHE + +P I
Sbjct: 180 SNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIG 239
Query: 215 D--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLS 272
+ AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 240 EPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELK 299
Query: 273 KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332
KV+R++TPWL+V++H PWYNSN H EG+ M A+ E + VDLVL+GHVH+YERS
Sbjct: 300 KVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSE 359
Query: 333 RVNNGK-----------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGE 381
RV+N K DP +YITIGDGGN EG+A + +PQP +S +REASFGH
Sbjct: 360 RVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAV 419
Query: 382 LKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410
L+I N THA+++WHRN D+EPV +D + +
Sbjct: 420 LEIYNRTHAYYTWHRNQDNEPVAADSIML 448
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/448 (41%), Positives = 264/448 (58%), Gaps = 43/448 (9%)
Query: 4 KFVLTAFVFISATVT-----TAEYIRPQPRRTLEFPWDPKPS----SHPQQVHISLAGDS 54
V+ AF+F+S T T++++R Q ++E D PS + P+QVH++ GD
Sbjct: 3 NLVIFAFLFLSITTVINGGITSKFVR-QALPSIEMSLDTFPSPGGYNTPEQVHLT-QGDH 60
Query: 55 H---MRVTWITD-DESSPSVVEYGTSPGGYNCG-----AEGESTSYRYLFYRSGKIHHTV 105
M V+W+T + + +VV Y + G + A + SYR+ Y SG +HH
Sbjct: 61 DGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHAT 120
Query: 106 IGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-IG 159
I LE+DT Y Y G + +F F TPP P TF + GDLGQT + TL H +
Sbjct: 121 IKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMS 180
Query: 160 QCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215
K L GDLSYAD + Q +WDT+G ++P A+ +P++ GNHE + +P I +
Sbjct: 181 NPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGE 240
Query: 216 --AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSK 273
AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 241 PHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKN 300
Query: 274 VDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR 333
V+R++TPWL+V++H PWYNSN H EG+ M + E L + VDLVL+GHVHAYERS R
Sbjct: 301 VNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSER 360
Query: 334 VNNGK-----------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGEL 382
++N K DP +YITIGDGGN EG+A + +PQP +S +REASFGH L
Sbjct: 361 ISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVL 420
Query: 383 KIVNSTHAFWSWHRNDDDEPVRSDQLWI 410
+I+N THA ++WHRN D+EPV +D + +
Sbjct: 421 EIMNRTHAQYTWHRNQDNEPVAADSIML 448
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 252/443 (56%), Gaps = 35/443 (7%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWD------PKPSSHPQQVHISLAGD--- 53
L VL A + + T+ +IR + +T++ P D P + PQQVHI+ GD
Sbjct: 11 LAVVLAAVMNAAIAGITSSFIR-KVEKTVDMPLDSDVFRVPPGYNAPQQVHIT-QGDHVG 68
Query: 54 SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113
M V+W+T DE S V Y + + A G +Y Y Y SG IHH I LE++T
Sbjct: 69 KAMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNT 128
Query: 114 VYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVH 166
Y+Y G F F TPP P TF + GDLGQ+ + TL H + K
Sbjct: 129 KYYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAV 188
Query: 167 LLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSY 220
L GDLSYAD Y H RWDT+G V+ + +PW+ T GNHE + P I + F+ +
Sbjct: 189 LFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPF 248
Query: 221 NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280
R+ +P++ SGS +Y A A++I+L SY+ Y +Y+ QY+WL+++L KV+R +TP
Sbjct: 249 TKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETP 308
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVN----- 335
WL+VL+H PWYNS H EG+ M + EP VDLV AGHVHAYERS RV+
Sbjct: 309 WLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYD 368
Query: 336 --NGKPDPC----GAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTH 389
NGK P VYITIGDGGN EGLA +PQP++S FREASFGH L I N TH
Sbjct: 369 IVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTH 428
Query: 390 AFWSWHRNDDDEPVRSDQLWITS 412
A++SWHRN D V +D +W+++
Sbjct: 429 AYYSWHRNQDGYAVEADSMWVSN 451
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/397 (45%), Positives = 244/397 (61%), Gaps = 26/397 (6%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK PQQVHI+ GD + V+W+T + S V YGTSP Y+ A+G++T+Y Y
Sbjct: 54 PKNQFSPQQVHIT-QGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTY 112
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y SG IHH ++ LE+DT Y+Y+ G+ EF F TPP P TF + GDLGQT
Sbjct: 113 YDYTSGYIHHCLLDKLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQT 172
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ----HRWDTFGELVQPLASARPWMVTQGN 204
+ STL+H + K L GDLSYAD RWD++G V+ + +PW+ T GN
Sbjct: 173 YNSLSTLEHYMKSKGQTVLFVGDLSYADRYSCNNGTRWDSWGRFVERSVAYQPWIWTVGN 232
Query: 205 HEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262
HE E P + + F ++Y R+ P S S+S L+YS A AH+I+L SY+ + +Y+
Sbjct: 233 HEIEYRPDLGEVFPFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTP 292
Query: 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLA 322
Q+ WL ++L++VDR+KTPWL+VL+H P YNSNEAH EG+ M E VDLV A
Sbjct: 293 QWLWLSEELTRVDREKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFA 352
Query: 323 GHVHAYERSIRVNN-----------GKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSV 371
GHVHAYERS R++N PD VYIT+GDGGN+EGLA ++ QPD+S
Sbjct: 353 GHVHAYERSYRISNIVYNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERFSESQPDYSA 412
Query: 372 FREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQL 408
FRE+S+GH L++ N THAF+ W+RNDD + + D++
Sbjct: 413 FRESSYGHSTLELRNRTHAFYQWNRNDDGKHIPVDRI 449
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 239/425 (56%), Gaps = 35/425 (8%)
Query: 18 TTAEYIRPQPRRTLEFPWD------PKPSSHPQQVHIS---LAGDSHMRVTWITDDESSP 68
+++ +IR + +T++ P D P + PQQVHI+ L G + + V+W+T DE
Sbjct: 24 SSSPFIR-KVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKA-VIVSWVTVDEPGS 81
Query: 69 SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEF 126
S V Y + AEG+ +YR+ Y SG IHHT I LE+ T Y+Y G +F
Sbjct: 82 SEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQF 141
Query: 127 EFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH--IGQCKYDVHLLPGDLSYAD-YMQH 180
F TPP P TF + GDLGQ+ + TL H + K L GDLSYAD Y H
Sbjct: 142 WFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNH 201
Query: 181 ---RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNS 235
RWD++G + + +PW+ T GNHE P I + F+ Y R+ +P++ S S S
Sbjct: 202 DNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTS 261
Query: 236 NLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295
+YS A AH+I+L SY+ Y +Y+ QY+WL+ +L KV+R +TPWL+VL+H PWYNS
Sbjct: 262 PFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYN 321
Query: 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGA 344
H EG+ M + EP VD+V AGHVHAYERS RV+N D
Sbjct: 322 YHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAP 381
Query: 345 VYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVR 404
VYITIGDGG EGLA PQP +S FREASFGH I N THA +SWHRN D V
Sbjct: 382 VYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVE 441
Query: 405 SDQLW 409
+D LW
Sbjct: 442 ADSLW 446
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 433 | ||||||
| 358248462 | 469 | uncharacterized protein LOC100782338 [Gl | 1.0 | 0.923 | 0.788 | 0.0 | |
| 187949279 | 435 | purple acid phosphatase [Glycine max] | 1.0 | 0.995 | 0.788 | 0.0 | |
| 357459553 | 433 | Purple acid phosphatase [Medicago trunca | 1.0 | 1.0 | 0.789 | 0.0 | |
| 357601490 | 437 | PAP18 [Gossypium hirsutum] | 0.956 | 0.947 | 0.811 | 0.0 | |
| 224126441 | 432 | predicted protein [Populus trichocarpa] | 0.997 | 1.0 | 0.782 | 0.0 | |
| 224117498 | 432 | predicted protein [Populus trichocarpa] | 0.997 | 1.0 | 0.789 | 0.0 | |
| 22331208 | 437 | purple acid phosphatase 18 [Arabidopsis | 0.995 | 0.986 | 0.758 | 0.0 | |
| 25229112 | 437 | putative purple acid phosphatase [Arabid | 0.995 | 0.986 | 0.756 | 0.0 | |
| 357494441 | 439 | Purple acid phosphatase [Medicago trunca | 0.969 | 0.956 | 0.767 | 0.0 | |
| 358248708 | 460 | purple acid phosphatase 18-like [Glycine | 0.963 | 0.906 | 0.780 | 0.0 |
| >gi|358248462|ref|NP_001239630.1| uncharacterized protein LOC100782338 [Glycine max] gi|304421382|gb|ADM32490.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/435 (78%), Positives = 381/435 (87%), Gaps = 2/435 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 35 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 94
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 95 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 154
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 155 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 214
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 215 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 274
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 275 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 334
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG MMA MEPLLYAAS DLVLAGHVHAYERS RV N + DPCG+V+ITIGDGGNKEGL
Sbjct: 335 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGL 394
Query: 359 ARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGC 418
A KY NPQP WS FREASFGHGEL+IVNSTHAFWSWHRNDDDEPV+SD +WITSL SSGC
Sbjct: 395 APKYINPQPIWSEFREASFGHGELQIVNSTHAFWSWHRNDDDEPVKSDDIWITSLTSSGC 454
Query: 419 VAEKSRELRKILMSP 433
V +K ELR LM+P
Sbjct: 455 VDQKRNELRNKLMTP 469
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|187949279|gb|ACD43082.1| purple acid phosphatase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/435 (78%), Positives = 381/435 (87%), Gaps = 2/435 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 1 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 60
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 61 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 120
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 121 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 180
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 181 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 240
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 241 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 300
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG MMA MEPLLYAAS DLVLAGHVHAYERS RV N + DPCG+V+ITIGDGGNKEGL
Sbjct: 301 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGL 360
Query: 359 ARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGC 418
A KY NPQP WS FREASFGHGEL+IVNSTHAFWSWHRNDDDEPV+SD +WITSL SSGC
Sbjct: 361 APKYINPQPIWSEFREASFGHGELQIVNSTHAFWSWHRNDDDEPVKSDDIWITSLTSSGC 420
Query: 419 VAEKSRELRKILMSP 433
V +K ELR LM+P
Sbjct: 421 VDQKRNELRNKLMTP 435
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357459553|ref|XP_003600057.1| Purple acid phosphatase [Medicago truncatula] gi|355489105|gb|AES70308.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/433 (78%), Positives = 378/433 (87%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
M+LK + T + +S T T +Y+RPQPR+TL PW KPSS+PQQVHISLAGD HMRVTW
Sbjct: 1 MKLKLIPTVLLILSVTSTADDYVRPQPRKTLHLPWHSKPSSYPQQVHISLAGDKHMRVTW 60
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
ITDD+S+PSVVEYGT PG Y+ AEGE+TSY Y+FY SGKIHHTVIGPLE ++VYFYRCG
Sbjct: 61 ITDDKSAPSVVEYGTLPGKYDNVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCG 120
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPEFE KTPPAQFPI+FAV GDLGQTGWTKSTLDHI QCKYDV+L+PGDLSYADY+QH
Sbjct: 121 GLGPEFELKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQH 180
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFG LVQPLAS+RPWMVTQGNHE E IPL+ D F SYN+RWKMPFEESGS+SNLYYS
Sbjct: 181 RWDTFGRLVQPLASSRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYS 240
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYD YS+QY+WLK DLSKVDRK+TPWLLV+ HVPWYNSN AHQGE
Sbjct: 241 FEVAGAHIIMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGE 300
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
G MM MEPLLYAASVDLV AGHVHAYERS RV NGK DPCGAV+ITIGDGGNKEGLA
Sbjct: 301 GGDMMETMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHITIGDGGNKEGLAH 360
Query: 361 KYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVA 420
KY +PQP WS FREASFGHGELKIVNSTHAFWSWHRNDDDEPV+SD +WITSLV+SGCVA
Sbjct: 361 KYIDPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVNSGCVA 420
Query: 421 EKSRELRKILMSP 433
+K EL LM+P
Sbjct: 421 QKKTELEHALMTP 433
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601490|gb|AET86955.1| PAP18 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/414 (81%), Positives = 365/414 (88%)
Query: 20 AEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG 79
+Y+RPQPR+TL FPW PK S P QVHISLAG++HMR++WITDD S+PS+VEYGT PG
Sbjct: 24 TDYVRPQPRKTLHFPWKPKHPSLPHQVHISLAGENHMRISWITDDNSAPSIVEYGTLPGQ 83
Query: 80 YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITF 139
Y + GE+ SY YLFY SGKIHHTVIGPLEHDT+YFYRCG QGPEF+ KTPP QFP+TF
Sbjct: 84 YTFSSSGETASYNYLFYSSGKIHHTVIGPLEHDTIYFYRCGGQGPEFQLKTPPGQFPVTF 143
Query: 140 AVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
AVAGDLGQTGWTKSTLDHI QCKYDVHLLPGDLSYAD MQH WD FGELVQPLASARPWM
Sbjct: 144 AVAGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLSYADCMQHLWDNFGELVQPLASARPWM 203
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE 259
VTQGNHEKE IP DAF+SYNARWKMPFEES S SNLYYSF+VAG H+IMLGSY DYDE
Sbjct: 204 VTQGNHEKEKIPFFTDAFESYNARWKMPFEESESTSNLYYSFEVAGVHVIMLGSYTDYDE 263
Query: 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDL 319
SDQY WLK DLSKVDRKKTPWL+VL HVPWYNSN AHQGEGDGMMA MEPLLYAA VDL
Sbjct: 264 LSDQYSWLKADLSKVDRKKTPWLVVLFHVPWYNSNHAHQGEGDGMMAAMEPLLYAAGVDL 323
Query: 320 VLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGH 379
V AGHVHAYERS RVN GK DPCG V+ITIGDGGN+EGLA+KY +P P+WS+FREASFGH
Sbjct: 324 VFAGHVHAYERSKRVNKGKSDPCGTVHITIGDGGNREGLAQKYIHPTPEWSMFREASFGH 383
Query: 380 GELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEKSRELRKILMSP 433
GELKIVNSTHAFWSWHRNDDDEPVRSDQ+WITSL+SSGC+AEK+ E KIL+SP
Sbjct: 384 GELKIVNSTHAFWSWHRNDDDEPVRSDQVWITSLISSGCLAEKAYESSKILVSP 437
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224126441|ref|XP_002319839.1| predicted protein [Populus trichocarpa] gi|222858215|gb|EEE95762.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/433 (78%), Positives = 380/433 (87%), Gaps = 1/433 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISA T EYIRP PR+TL FPW+ K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLFVFLLISAAAT-CEYIRPPPRKTLHFPWNSKLSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+++D+S+ +VEYGTSPG Y+ ++GESTSY YLFY SGKIHHT+IGPLE +TVY+YRCG
Sbjct: 60 VSNDKSTLPMVEYGTSPGRYSNKSQGESTSYSYLFYSSGKIHHTIIGPLEDNTVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+ FAVAGDLGQTGWTKSTLDHI CKYDVHLLPGDLSYADY+QH
Sbjct: 120 GGGPEYKLKTPPAQFPVMFAVAGDLGQTGWTKSTLDHIDLCKYDVHLLPGDLSYADYIQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFGELV+PLASARPWMVTQGNHEKESI D FQSYN+RWKMP+EESGS+SNLYYS
Sbjct: 180 RWDTFGELVEPLASARPWMVTQGNHEKESIMFFKDGFQSYNSRWKMPYEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYDE+SDQY WLK D++KVDRKKTPWL+VL HVPWYNSNEAHQ E
Sbjct: 240 FEVAGAHIIMLGSYTDYDEHSDQYNWLKADVAKVDRKKTPWLIVLFHVPWYNSNEAHQDE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
GD M+A MEPLL+AASVD+VLAGHVHAYER+ RVN GK DPCGAV+ITIGDGGN+EGLA
Sbjct: 300 GDRMLAAMEPLLHAASVDIVLAGHVHAYERTERVNKGKLDPCGAVHITIGDGGNREGLAS 359
Query: 361 KYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVA 420
KYKNPQP WSVFREASFGHGELK+ NSTHA+WSWHRNDDDE VRSDQ+WITSL +SGC+A
Sbjct: 360 KYKNPQPAWSVFREASFGHGELKLANSTHAYWSWHRNDDDESVRSDQVWITSLENSGCIA 419
Query: 421 EKSRELRKILMSP 433
EK EL KIL P
Sbjct: 420 EKKHELMKILSGP 432
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117498|ref|XP_002317591.1| predicted protein [Populus trichocarpa] gi|222860656|gb|EEE98203.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/433 (78%), Positives = 377/433 (87%), Gaps = 1/433 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISAT + EYIRP R+ L+F K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLALFLLISATAAS-EYIRPSTRKNLDFSRPSKSSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+TDD+S+ S+VEYGTSPG Y+ A GEST Y YLFY SGKIHHTVIGPLE + VY+YRCG
Sbjct: 60 VTDDKSAASMVEYGTSPGRYSNIALGESTWYSYLFYSSGKIHHTVIGPLEDNAVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+TFAVAGDLGQTGWT+STLDHI QCKYDVHLLPGDLSYADYMQH
Sbjct: 120 GGGPEYKLKTPPAQFPVTFAVAGDLGQTGWTQSTLDHIDQCKYDVHLLPGDLSYADYMQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
WDTFGELV+PLASARPWMVTQGNHE+ESIP + D F+ YN+RWKMPFEESGS+SNLYYS
Sbjct: 180 LWDTFGELVEPLASARPWMVTQGNHERESIPFLKDGFEPYNSRWKMPFEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+V+GAH+IMLGSY YDEYS+QY WL+ DL+KVDR KTPWLLVL HVPWYNSNEAHQ E
Sbjct: 240 FEVSGAHIIMLGSYTGYDEYSNQYNWLEADLAKVDRNKTPWLLVLFHVPWYNSNEAHQNE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
GD MM MEPLLYAASVD+VLAGHVHAYER+ RVNNGK DPCGAV+ITIGDGGN+EGLA
Sbjct: 300 GDRMMEAMEPLLYAASVDIVLAGHVHAYERTERVNNGKLDPCGAVHITIGDGGNREGLAH 359
Query: 361 KYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVA 420
KYKNPQP WSVFREASFGHGELK+ NSTHAFWSWHRNDDDEPVRSDQ+WITSLV+S CVA
Sbjct: 360 KYKNPQPAWSVFREASFGHGELKLANSTHAFWSWHRNDDDEPVRSDQVWITSLVNSECVA 419
Query: 421 EKSRELRKILMSP 433
EK LRKILM P
Sbjct: 420 EKKHGLRKILMGP 432
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331208|ref|NP_188686.2| purple acid phosphatase 18 [Arabidopsis thaliana] gi|75273656|sp|Q9LJU7.1|PPA18_ARATH RecName: Full=Purple acid phosphatase 18; Flags: Precursor gi|11994138|dbj|BAB01159.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|17064824|gb|AAL32566.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|20259848|gb|AAM13271.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|332642867|gb|AEE76388.1| purple acid phosphatase 18 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/431 (75%), Positives = 371/431 (86%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
Query: 363 KNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEK 422
K+P P+WSVFREASFGHGEL++VNSTHA W+WHRNDDDEP RSD++W+ SLV+SGC+ ++
Sbjct: 367 KDPSPEWSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNSGCLKKR 426
Query: 423 SRELRKILMSP 433
+ELRK+L+ P
Sbjct: 427 PQELRKMLLEP 437
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|25229112|gb|AAN74649.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/431 (75%), Positives = 370/431 (85%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNL YSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLNYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
Query: 363 KNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEK 422
K+P P+WSVFREASFGHGEL++VNSTHA W+WHRNDDDEP RSD++W+ SLV+SGC+ ++
Sbjct: 367 KDPSPEWSVFREASFGHGELQMVNSTHAIWTWHRNDDDEPTRSDEVWLNSLVNSGCLKKR 426
Query: 423 SRELRKILMSP 433
+ELRK+L+ P
Sbjct: 427 PQELRKMLLEP 437
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357494441|ref|XP_003617509.1| Purple acid phosphatase [Medicago truncatula] gi|355518844|gb|AET00468.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/422 (76%), Positives = 371/422 (87%), Gaps = 2/422 (0%)
Query: 14 SATVTTAEYIRPQPRRTLE--FPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVV 71
S+TVT +Y+RP PR+ L +PWD K +PQQVHISLAGD HMR+TWITDD+ SPS V
Sbjct: 18 SSTVTADQYVRPLPRKNLNIPWPWDSKSQPYPQQVHISLAGDRHMRITWITDDKHSPSFV 77
Query: 72 EYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTP 131
EYGT PG Y+ +EGE TSY Y+ Y SGKIHHTVIGPLE++T+YFYRCG QGPEF+ KTP
Sbjct: 78 EYGTLPGRYDSISEGEFTSYNYMLYSSGKIHHTVIGPLEYNTMYFYRCGGQGPEFKLKTP 137
Query: 132 PAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191
P++FPITFAVAGDLGQTGWTKSTLDHI QCKYDV+LLPGDLSYAD MQH WD+FG LV+P
Sbjct: 138 PSKFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVYLLPGDLSYADCMQHLWDSFGRLVEP 197
Query: 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
LASARPWMVT+GNHE+E+IPL+ D F SYN+RWKMPFEESGS SNLYYSF+VAG H+IML
Sbjct: 198 LASARPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIML 257
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
GSYADYD+YS+QYRWLK+DLSKVDRK+TPWL+VL HVPWYNSN+AHQG GD MM +MEPL
Sbjct: 258 GSYADYDKYSEQYRWLKEDLSKVDRKRTPWLVVLFHVPWYNSNKAHQGAGDDMMTVMEPL 317
Query: 312 LYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSV 371
LYAASVDLVLAGHVHAYERS RV NG+ DPCGAV+ITIGDGGN+EGLA +Y NPQP WS
Sbjct: 318 LYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPKWSE 377
Query: 372 FREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEKSRELRKILM 431
FREASFGHGELKIVNSTHAFWSWHRND+DE +++D +WITSL+SSGCV + ELR +LM
Sbjct: 378 FREASFGHGELKIVNSTHAFWSWHRNDNDESIKADGIWITSLISSGCVDKNKHELRSMLM 437
Query: 432 SP 433
+P
Sbjct: 438 TP 439
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248708|ref|NP_001239671.1| purple acid phosphatase 18-like [Glycine max] gi|255636455|gb|ACU18566.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/420 (78%), Positives = 362/420 (86%), Gaps = 3/420 (0%)
Query: 17 VTTAEYIRPQPRRTLEFPWD---PKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEY 73
T +Y+RP PR+TL PWD SS+PQQVHISLAGD HMRVTWITDD+ SPS VEY
Sbjct: 41 TATPQYVRPLPRKTLTIPWDSISKAHSSYPQQVHISLAGDKHMRVTWITDDKHSPSYVEY 100
Query: 74 GTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPA 133
GT PG Y+ AEGE TSY YL Y SGKIHH VIGPLE +TVYFYRCG +GPEFE KTPPA
Sbjct: 101 GTLPGRYDSIAEGECTSYNYLLYSSGKIHHAVIGPLEDNTVYFYRCGGKGPEFELKTPPA 160
Query: 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA 193
QFPITFAVAGDLGQTGWTKSTL HI QCKYDV+LLPGDLSYAD MQH WD FG+LV+PLA
Sbjct: 161 QFPITFAVAGDLGQTGWTKSTLAHIDQCKYDVYLLPGDLSYADCMQHLWDNFGKLVEPLA 220
Query: 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
S RPWMVT+GNHE+E+I L+ D F SYN+RWKMP+EESGS SNLYYSF+VAG H+IMLGS
Sbjct: 221 STRPWMVTEGNHEEENILLLTDEFVSYNSRWKMPYEESGSTSNLYYSFEVAGVHVIMLGS 280
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
YADYD YS+QYRWLK+DLSKVDRK+TPWLLVL HVPWYNSN+AHQG GD MMA MEPLLY
Sbjct: 281 YADYDVYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLY 340
Query: 314 AASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFR 373
AASVDLV+AGHVHAYERS RV NG+ DPCGAV+ITIGDGGN+EGLA KY NPQP WS FR
Sbjct: 341 AASVDLVIAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHKYINPQPKWSEFR 400
Query: 374 EASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEKSRELRKILMSP 433
EASFGHGELKIVNSTH FWSWHRNDDDEPV++D +WITSL SSGCV +K+ ELR L++P
Sbjct: 401 EASFGHGELKIVNSTHTFWSWHRNDDDEPVKADDIWITSLASSGCVDQKTHELRSTLLTP 460
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 433 | ||||||
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.976 | 0.967 | 0.769 | 1.6e-191 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.956 | 0.953 | 0.595 | 3.1e-138 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.944 | 0.957 | 0.580 | 6.4e-131 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.967 | 0.958 | 0.576 | 7.3e-130 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.854 | 0.778 | 0.440 | 6.2e-85 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.859 | 0.801 | 0.447 | 7.6e-80 | |
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.434 | 0.353 | 0.510 | 1.5e-77 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.745 | 0.693 | 0.459 | 1.6e-77 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.755 | 0.701 | 0.454 | 4.3e-77 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.919 | 0.848 | 0.407 | 5.7e-75 |
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1856 (658.4 bits), Expect = 1.6e-191, P = 1.6e-191
Identities = 327/425 (76%), Positives = 371/425 (87%)
Query: 9 AFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSP 68
+ +F SA +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T+D+SSP
Sbjct: 15 SIIFTSAAAD--DYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVTNDKSSP 72
Query: 69 SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEF 128
S VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +GPEF
Sbjct: 73 SFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGEGPEFHL 132
Query: 129 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL 188
KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+WDTFGEL
Sbjct: 133 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGEL 192
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
VQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+VAG H
Sbjct: 193 VQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHA 252
Query: 249 IMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM 308
IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD MMA M
Sbjct: 253 IMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEM 312
Query: 309 EPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPD 368
EPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKYK+P P+
Sbjct: 313 EPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKYKDPSPE 372
Query: 369 WSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVSSGCVAEKSRELRK 428
WSVFREASFGHGEL++VNSTHA W+WHRNDDDEP RSD++W+ SLV+SGC+ ++ +ELRK
Sbjct: 373 WSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNSGCLKKRPQELRK 432
Query: 429 ILMSP 433
+L+ P
Sbjct: 433 MLLEP 437
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1353 (481.3 bits), Expect = 3.1e-138, P = 3.1e-138
Identities = 249/418 (59%), Positives = 303/418 (72%)
Query: 5 FVLTAFVFISATVTTAEY--IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
F+ +F+ ++ A+ + QP R + F + + S PQQVHISLAG HMRVT+IT
Sbjct: 7 FLSFTLLFLCPFISQADVPELSRQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFIT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D SVVEYG PG Y+ A GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG
Sbjct: 67 EDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGN 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF FKTPP+ FP+ FA+ GDLGQT WT +TL HI YDV LLPGDLSYAD Q W
Sbjct: 127 GPEFSFKTPPSTFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDA-FQSYNARWKMPFEESGSNSNLYYSF 241
D+FG LV+PLAS RPWMVT+GNHE E P+I F+SYNARW MP ES S SNLYYSF
Sbjct: 187 DSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSF 246
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEG 301
DVAG H +MLGSY D+D SDQY+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG
Sbjct: 247 DVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEG 306
Query: 302 DGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARK 361
+ M ME LL+ A VD+V +GHVHAYER RV N K DPCG ++ITIGDGGN+EGLA
Sbjct: 307 ESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALS 366
Query: 362 YKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSL-VSSGC 418
+K P S FRE+SFGHG LK+++ A WSWHRN+D + +D++W+ SL SS C
Sbjct: 367 FKKPPSPLSEFRESSFGHGRLKVMDGKRAHWSWHRNNDSNSLLADEVWLDSLSTSSSC 424
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 245/422 (58%), Positives = 301/422 (71%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357
E + M ME LLY A VDLV AGHVHAYER RV K D CG VYI IGDGGN EG
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEG 363
Query: 358 LARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLVS-S 416
LA KY++P P+ S+FREASFGHG+L + N+THA W WHRNDDD V D +W+TSL++ S
Sbjct: 364 LATKYRDPNPEISLFREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWLTSLLADS 423
Query: 417 GC 418
C
Sbjct: 424 SC 425
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 246/427 (57%), Positives = 301/427 (70%)
Query: 5 FVLT-AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVT 59
F+++ + F+S V A Y RP PR L +P +PQQVHISLAG HMRVT
Sbjct: 9 FLISFSLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVT 67
Query: 60 WITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119
+ TDD + S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRC
Sbjct: 68 YTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRC 127
Query: 120 GRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ 179
G G EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q
Sbjct: 128 GGHGDEFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQ 187
Query: 180 HRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLY 238
WD+FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLY
Sbjct: 188 PLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLY 247
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSFDVAG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH
Sbjct: 248 YSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHY 307
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG+ M + +E LLY A VD+V AGHVH YER + N K DPCG +YITIGDGGN+EGL
Sbjct: 308 GEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGL 367
Query: 359 ARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS-LVSSG 417
A ++K PQ S FRE+SFGHG L+I++ A WSWHRN+D+ +D++ S SS
Sbjct: 368 ALRFKKPQSPLSEFRESSFGHGRLRIIDHKRAHWSWHRNNDEMSSIADEVSFESPRTSSH 427
Query: 418 CVAEKSR 424
C + + R
Sbjct: 428 CHSNRYR 434
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 175/397 (44%), Positives = 244/397 (61%)
Query: 37 PKPSSHPQQVHISLAGDSHMR---VTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWS 370
AGHVHAYERS R++N + PD VYIT+GDGGN+EGLA ++ PQPD+S
Sbjct: 347 AGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYS 406
Query: 371 VFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQ 407
FREAS+GH L I N THA + W+RNDD + V +D+
Sbjct: 407 AFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVATDE 443
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 179/400 (44%), Positives = 228/400 (57%)
Query: 37 PKPSSHPQQVHIS---LAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
P + PQQVHI+ L G + + V+W+T DE S V Y + AEG+ +YR+
Sbjct: 48 PPGYNAPQQVHITQGDLVGKAVI-VSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQT 148
Y SG IHHT I LE+ T Y+Y G +F F TPP P TF + GDLGQ+
Sbjct: 107 FNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQS 166
Query: 149 GWTKSTLDH--IGQCKYDVHLLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQ 202
+ TL H + K L GDLSYAD Y H RWD++G + + +PW+ T
Sbjct: 167 FDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTA 226
Query: 203 GNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY 260
GNHE P I + F+ Y R+ +P++ S S S +YS A AH+I+L SY+ Y +Y
Sbjct: 227 GNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKY 286
Query: 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLV 320
+ QY+WL+ +L KV+R +TPWL+VL+H PWYNS H EG+ M + EP VD+V
Sbjct: 287 TPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVV 346
Query: 321 LAGHVHAYERSIRVNN-------G--KP--DPCGAVYITIGDGGNKEGLARKYKNPQPDW 369
AGHVHAYERS RV+N G P D VYITIGDGG EGLA PQP +
Sbjct: 347 FAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKY 406
Query: 370 SVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLW 409
S FREASFGH I N THA +SWHRN D V +D LW
Sbjct: 407 SAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLW 446
|
|
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 511 (184.9 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 99/194 (51%), Positives = 128/194 (65%)
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
Q RWD +G ++ L S P MV +GNHE E + F++Y++R+ PF ESGS+S LY
Sbjct: 252 QPRWDYWGRFMENLTSKVPLMVIEGNHEIE-LQAENKTFEAYSSRFAFPFNESGSSSTLY 310
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+ G H +MLG+Y YD+ ++QY WLK DL+KVDR TPWL+ H PWY+S AH
Sbjct: 311 YSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHY 370
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
E + M ME LLY+ D+V GHVHAYERS RV N + DPCG VYI IGDGGN+E +
Sbjct: 371 REAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKM 430
Query: 359 ARKY-----KNPQP 367
A ++ K P+P
Sbjct: 431 AIEHADDPGKCPEP 444
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 159/346 (45%), Positives = 219/346 (63%)
Query: 88 STSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVA 142
++SYR+ Y SG +HH I LE+DT Y Y G G +F F +PP P TF +
Sbjct: 103 TSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGII 162
Query: 143 GDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARP 197
GDLGQT + TL H + K L PGDLSYAD + Q +WD++G V+P A+ +
Sbjct: 163 GDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQT 222
Query: 198 WMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255
++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L SY+
Sbjct: 223 FIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYS 282
Query: 256 DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA 315
Y +Y+ QY WL+ +L KV+R++TPWL+V++H PWYNSN H EG+ M A+ E +
Sbjct: 283 AYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNS 342
Query: 316 SVDLVLAGHVHAYERSIRVNNGK---------P--DPCGAVYITIGDGGNKEGLARKYKN 364
VDLVL+GHVH+YERS RV+N K P DP +YITIGDGGN EG+A + +
Sbjct: 343 KVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTD 402
Query: 365 PQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410
PQP +S +REASFGH L+I N THA+++WHRN D+EPV +D + +
Sbjct: 403 PQPSYSAYREASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIML 448
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 159/350 (45%), Positives = 218/350 (62%)
Query: 84 AEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPIT 138
A + SYR+ Y SG +HH I LE+DT Y Y G + +F F TPP P T
Sbjct: 99 AHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYT 158
Query: 139 FAVAGDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLA 193
F + GDLGQT + TL H + K L GDLSYAD + Q +WDT+G ++P A
Sbjct: 159 FGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCA 218
Query: 194 SARPWMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
+ +P++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L
Sbjct: 219 AYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVL 278
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
SY+ Y +Y+ QY WL+ +L V+R++TPWL+V++H PWYNSN H EG+ M + E
Sbjct: 279 SSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESW 338
Query: 312 LYAASVDLVLAGHVHAYERSIRVNNGK---------P--DPCGAVYITIGDGGNKEGLAR 360
L + VDLVL+GHVHAYERS R++N K P DP +YITIGDGGN EG+A
Sbjct: 339 LVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIAN 398
Query: 361 KYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410
+ +PQP +S +REASFGH L+I+N THA ++WHRN D+EPV +D + +
Sbjct: 399 SFVDPQPSYSAYREASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIML 448
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 173/425 (40%), Positives = 238/425 (56%)
Query: 12 FISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGD--SHMRVTWITDDESSPS 69
F S V ++ P + F P P+S PQQVH++ + + ++W+T +
Sbjct: 30 FTSEYVRGSDLPDDMPLDSDVFEVPPGPNS-PQQVHVTQGNHEGNGVIISWVTPVKPGSK 88
Query: 70 VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFE 127
V+Y AE +YR+ Y SG IHH +I LE DT Y+Y G + F
Sbjct: 89 TVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRFW 148
Query: 128 FKTPPAQ---FPITFAVAGDLGQTGWTKSTLDH--IGQCKYDVHLLPGDLSYAD-YMQH- 180
F PP P TF + GDLGQT + STL H + K L GDLSYAD Y H
Sbjct: 149 FFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHD 208
Query: 181 --RWDTFGELVQPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSN 236
RWDT+G V+ + +PW+ T GNHE + +P I ++ F+ + R+ P + SGS S
Sbjct: 209 NNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISP 268
Query: 237 LYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296
L+YS A A++I++ Y+ Y Y+ QY+WL+ +L V+R +TPWL+VL+H P+Y+S
Sbjct: 269 LWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVH 328
Query: 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNN-------G--KP--DPCGAV 345
H EG+ + + E VD+V AGHVHAYERS RV+N G +P D +
Sbjct: 329 HYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPI 388
Query: 346 YITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRS 405
YITIGDGGN EGL PQP +S FREASFGHG L+I N THA++SW+RN D V +
Sbjct: 389 YITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVAA 448
Query: 406 DQLWI 410
D +W+
Sbjct: 449 DSVWL 453
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q6ZNF0 | PAPL_HUMAN | 3, ., 1, ., 3, ., 2 | 0.3075 | 0.8337 | 0.8242 | yes | no |
| Q9LJU7 | PPA18_ARATH | 3, ., 1, ., 3, ., 2 | 0.7587 | 0.9953 | 0.9862 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_XIII0422 | hypothetical protein (432 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 433 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 0.0 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-113 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 6e-18 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 7e-16 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 7e-09 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 8e-08 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 4e-06 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 0.004 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 537 bits (1384), Expect = 0.0
Identities = 248/420 (59%), Positives = 304/420 (72%), Gaps = 9/420 (2%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y RP R+ L P + +HP QVHISL G MR++WIT D
Sbjct: 7 LVAILLIVLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCG--RQ 122
PSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG
Sbjct: 67 IPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSS 125
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
EF F+TPP++FPI FAV+GDLG + WTKSTL+H+ + YDV +LPGDLSYA++ Q W
Sbjct: 126 TQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLW 185
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIM-DAFQSYNARWKMPFEESGSNSNLYYSF 241
DTFG LVQPLAS RPWMVT GNHE E IP++ + F +YNARW+MPFEESGS SNLYYSF
Sbjct: 186 DTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSF 245
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE- 300
+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQGE
Sbjct: 246 NVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEK 305
Query: 301 -GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLA 359
GM ME LLY A VDLV AGHVHAYER RV GK D CG VYITIGDGGN+EGLA
Sbjct: 306 ESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLA 365
Query: 360 RKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLV-SSGC 418
KY +P+PD S+FREASFGHG+L +V++ W+WHRNDDD+ V SD +W+ SL+ GC
Sbjct: 366 TKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTEPGC 425
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-113
Identities = 134/297 (45%), Positives = 169/297 (56%), Gaps = 22/297 (7%)
Query: 134 QFPITFAVAGDLGQ-TGWTKSTLDHIGQ--CKYDVHLLPGDLSYADY--MQHRWDTFGEL 188
P FAV GD+GQ T + +TLDH+ + YD L GDL+YAD RWDTF
Sbjct: 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQ 61
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
++PLAS P+MVT GNHE + +++ R++ P SGS SNL+YSFDV H
Sbjct: 62 IEPLASYVPYMVTPGNHEADYNFSF-YKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHF 120
Query: 249 IMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDG 303
+ L + D+ S QY WL+ DL+KVDR KTPW++V+ H P Y SN H EG+
Sbjct: 121 VSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEK 180
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP--------DPCGAVYITIGDGGNK 355
M A +E L Y VDLVL+GHVHAYER+ V NG +P G V+I IG GGN
Sbjct: 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGND 240
Query: 356 EGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS 412
EGL P P WS FRE+ +G G L + NSTH + W RNDD + D WI
Sbjct: 241 EGLDPFSA-PPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVI--DSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 6e-18
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 345 VYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDE 401
V+I +G GN + +PQP WS FR++ +G+G L + N TH +W + R+DD
Sbjct: 4 VHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGT 57
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 75.2 bits (184), Expect = 7e-16
Identities = 38/195 (19%), Positives = 58/195 (29%), Gaps = 14/195 (7%)
Query: 138 TFAVAGDL----GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA 193
V GDL L+ +G+ K D+ L GDL L
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGP-PSLEVLALLFALKLK 59
Query: 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+ P + +GNH+ Y +P+ +I L S
Sbjct: 60 APGPVYLVRGNHD---FDSGNSELGFYLECAGLPY------VLGNGDVSNGTVEIIGLSS 110
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
+L+ + ++L+H P S ++ +E LL
Sbjct: 111 LYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLK 170
Query: 314 AASVDLVLAGHVHAY 328
VDLVL GH H
Sbjct: 171 DNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 7e-09
Identities = 44/207 (21%), Positives = 65/207 (31%), Gaps = 46/207 (22%)
Query: 197 PWMVTQGNHEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAG------AHL 248
PW + GNH+ + + + RW MP YY
Sbjct: 72 PWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEF 123
Query: 249 IML------GSYADYD---------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293
IM+ G+ D +Q WL+ L+ W +V+ H P Y S
Sbjct: 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPIY-S 179
Query: 294 NEAHQGEGDGMMAIME--PLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351
+ H G + PLL VD L+GH H + K D G ++ G
Sbjct: 180 SGEH---GPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI------KDDGSGTSFVVSGA 230
Query: 352 GGNKEGLARKYKNPQPDWSVFREASFG 378
G + +S F + G
Sbjct: 231 GSKARPSVKHIDKVPQFFSGFTSSGGG 257
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 8e-08
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 247 HLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWL-------LVLLHVPWYNSNEAHQG 299
+++LG ++ L L+ + P ++L H P Y+ +
Sbjct: 29 FVLVLGDLVGDGPDPEE--VLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSP 86
Query: 300 EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP 339
+ D + LL VDLVL+GH H YER G
Sbjct: 87 DEDPGSEALLELLEKYGVDLVLSGHTHVYERREPDGGGTL 126
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 4e-06
Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 18/180 (10%)
Query: 153 STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212
+ L I Q K D+ ++ GDL+ + EL+ L P +V GNH+ +
Sbjct: 24 ALLAAIEQLKPDLLVVTGDLTNDGEPEEY-RRLKELLARLELPAPVIVVPGNHD---ARV 79
Query: 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS-YADYDE---YSDQYRWLK 268
+ S + G +I L S ++Q WL+
Sbjct: 80 VNGEAFSDQFFNRYAVLVGA--------CSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLE 131
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM--EPLLYAASVDLVLAGHVH 326
+ L+ + ++VL H P + + + + V LVL+GH+H
Sbjct: 132 EALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIH 191
|
Length = 301 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 238 YYSFDVAGAHLIMLGS--YAD----YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291
Y+SF V G I+L S + D + Q WL++ L ++V H+PW+
Sbjct: 118 YFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWF 177
Query: 292 NSNEAHQGEGDGM----MAIMEPLL---YAASVDLVLAGHVH 326
+ E D ++ +PLL A V V +GH H
Sbjct: 178 LEDP---DEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.96 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.93 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.92 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.92 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.89 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.87 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.86 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.82 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.77 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.75 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.73 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.72 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.72 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.71 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.68 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.65 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.6 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.6 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.57 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.57 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.56 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.55 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.52 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.52 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.45 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.36 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.35 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.25 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.25 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.24 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.16 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.16 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.14 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.13 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.12 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.12 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.06 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.03 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.01 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.99 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.98 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.98 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.94 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.92 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.9 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.86 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.84 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.8 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.79 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.77 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.74 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.66 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.64 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.62 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.61 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.52 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.51 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.51 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.49 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.48 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.4 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.37 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.3 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.28 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.27 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.24 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.23 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.23 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.21 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.19 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.16 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.15 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.13 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 98.03 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 98.02 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.99 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.81 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.68 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.68 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.66 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.62 | |
| PHA02239 | 235 | putative protein phosphatase | 97.5 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.5 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.43 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.42 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.39 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.38 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.34 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 97.3 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.3 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.28 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.2 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.17 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.12 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.94 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.93 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.9 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.88 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.88 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.87 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.86 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.82 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.74 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.71 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.6 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.47 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.26 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 96.25 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.18 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 96.03 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.1 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.1 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 94.86 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.4 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.4 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 94.14 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 93.93 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 93.63 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.58 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 93.55 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.52 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 92.41 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 92.04 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 91.76 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.73 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 91.54 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 89.86 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 88.91 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 88.39 |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=612.49 Aligned_cols=402 Identities=60% Similarity=1.125 Sum_probs=353.4
Q ss_pred cCCCccccCCCCCCcccC-CCCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeee-
Q 013955 17 VTTAEYIRPQPRRTLEFP-WDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYL- 94 (433)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~- 94 (433)
...+.|+||.|..++... .+......|+||||+++++++|+|+|.|.+. ..+.|+||++++.++.++.|.+++|.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qvhls~~~~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~~~~ 95 (427)
T PLN02533 17 GNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYHYLL 95 (427)
T ss_pred cCcccccCCCccccccccccCCCCCCCCceEEEEEcCCCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEeccc
Confidence 345799999998866543 3457888999999999999999999999964 5689999999888888888887776642
Q ss_pred eeecCeEEEEEeCCCCCCCEEEEEecc--cCCeeEEECCCCCCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccc
Q 013955 95 FYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDL 172 (433)
Q Consensus 95 ~~~~~~~~~v~l~~L~p~t~Y~Y~v~~--~s~~~~F~T~p~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~ 172 (433)
...++++|+|+|+||+|+|+|+|||+. .++.|+|+|+|...+++|+++||+|...+...+++.+.+.+|||||++||+
T Consensus 96 ~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~GDl 175 (427)
T PLN02533 96 IYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDL 175 (427)
T ss_pred cccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCCCCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEcCcc
Confidence 245789999999999999999999985 468899999998889999999999987777788999998999999999999
Q ss_pred cccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc-cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEE
Q 013955 173 SYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251 (433)
Q Consensus 173 ~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~l 251 (433)
+|++..+..|+.|.+.++++...+|+|+++||||....+.. ...+..|.++|.+|.++.+...+.||+|++|++|||+|
T Consensus 176 ~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~L 255 (427)
T PLN02533 176 SYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIML 255 (427)
T ss_pred ccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEE
Confidence 99888778999999999999888999999999999654321 23577788999999866566678999999999999999
Q ss_pred cccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCC--ChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 252 ds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
|++.++....+|++||+++|++.++++.||+||++|+|+|++...+.+. ...+++.|++||++++||++|+||+|.|+
T Consensus 256 ds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 256 GSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred eCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccc
Confidence 9998887789999999999999877678999999999999876544332 23468899999999999999999999999
Q ss_pred eeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEE
Q 013955 330 RSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLW 409 (433)
Q Consensus 330 r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~ 409 (433)
|+.|+++++.+++|++||++|+||+.+++...+..++|+|++|++.+|||++|+|.|.|+|+|+|++++|++++|.|+||
T Consensus 336 R~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~ 415 (427)
T PLN02533 336 RFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVW 415 (427)
T ss_pred ccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEE
Confidence 99999999999999999999999999987666778889999999999999999999999999999999899888999999
Q ss_pred EEeCCC-CCCC
Q 013955 410 ITSLVS-SGCV 419 (433)
Q Consensus 410 i~~~~~-~~~~ 419 (433)
|.|-.+ +.|+
T Consensus 416 i~~~~~~~~~~ 426 (427)
T PLN02533 416 LKSLLTEPGCN 426 (427)
T ss_pred EEeccCCCccC
Confidence 999975 8886
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-73 Score=546.00 Aligned_cols=378 Identities=43% Similarity=0.697 Sum_probs=325.0
Q ss_pred CCCCCCceEEEEecC-CCcEEEEEEcCCCCCCcEEEEeccCCCCC-----eeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAG-DSHMRVTWITDDESSPSVVEYGTSPGGYN-----CGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~~~~v~y~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
..-..|+||||++++ .++|+|+|.|.+. ....|+|+....... ..+.+.+..+.+.....+++|+|+|++|+|
T Consensus 40 ~~~~~peQvhlS~~~~~~~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~ 118 (452)
T KOG1378|consen 40 SVVNSPEQVHLSFTDNLNEMRVSWVTGDG-EENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSGYIHDAVMKNLEP 118 (452)
T ss_pred ccCCCCCeEEEeccCCCCcEEEEEeCCCC-CCceEEEeecCCCccccccccceEEEecccccccceeeeEeeeeecCCCC
Confidence 455679999999988 5599999999964 347899997754422 223333333333345789999999999999
Q ss_pred CCEEEEEeccc---CCeeEEECCCC-CCCeEEEEEecCCCCCChHHHHHHhhcC-CCceEEccccccccccch-hhHHHh
Q 013955 112 DTVYFYRCGRQ---GPEFEFKTPPA-QFPITFAVAGDLGQTGWTKSTLDHIGQC-KYDVHLLPGDLSYADYMQ-HRWDTF 185 (433)
Q Consensus 112 ~t~Y~Y~v~~~---s~~~~F~T~p~-~~~~~f~~~gD~~~~~~~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~-~~w~~~ 185 (433)
+|+|+|+||++ |++|+|+|+|. ..+.+|+++||+|.......++...... ++|+||+.||++|+++.. .+||.|
T Consensus 119 ~t~YyY~~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f 198 (452)
T KOG1378|consen 119 NTRYYYQVGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEF 198 (452)
T ss_pred CceEEEEeCCCCCcccceEeECCCCccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHH
Confidence 99999999984 68999999995 5899999999999988776777766544 599999999999999887 599999
Q ss_pred hhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC--CCChHH
Q 013955 186 GELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--DEYSDQ 263 (433)
Q Consensus 186 ~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~--~~~~~Q 263 (433)
.++++++++.+|+|++.||||.+..+. ..|..|.+||.||.++..+..+.||||++|++|||+|+|+.++ ....+|
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~--~~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~Q 276 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQ--PCFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQ 276 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCc--ccccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchH
Confidence 999999999999999999999976554 2689999999999987777778999999999999999998875 346899
Q ss_pred HHHHHHHhhccccCCCCeEEEEecccccCCCCC-CCCCCh--hHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCcc-
Q 013955 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA-HQGEGD--GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP- 339 (433)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~- 339 (433)
.+||+++|+++++++.||+||+.|.|+|++... +..++. .++..|++||.+++||++|.||.|.|||++|++|.+.
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~ 356 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCG 356 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceee
Confidence 999999999998865899999999999998874 444444 6788999999999999999999999999999998764
Q ss_pred ---------CCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEE
Q 013955 340 ---------DPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410 (433)
Q Consensus 340 ---------~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i 410 (433)
++++++||++|+||+.+++. .+..++|+|++||+++|||++|++.|+||+.++++++.|+++++.|+|+|
T Consensus 357 ~~~~~~~~~d~~aPvyI~~G~~G~~e~~~-~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl 435 (452)
T KOG1378|consen 357 TGWGPVHLVDGMAPIYITVGDGGNHEHLD-PFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWL 435 (452)
T ss_pred ccCCcccccCCCCCEEEEEccCCcccccC-cccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEE
Confidence 78999999999999999875 45558899999999999999999999999999999998898999999999
Q ss_pred EeCCCCCCC
Q 013955 411 TSLVSSGCV 419 (433)
Q Consensus 411 ~~~~~~~~~ 419 (433)
.|+....|.
T Consensus 436 ~k~~~~~~~ 444 (452)
T KOG1378|consen 436 IKDYRDMVV 444 (452)
T ss_pred EcccCcccc
Confidence 999644333
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-47 Score=365.40 Aligned_cols=275 Identities=48% Similarity=0.838 Sum_probs=218.5
Q ss_pred CCCeEEEEEecCCCC-CChHHHHHHhhc--CCCceEEccccccccccch--hhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQT-GWTKSTLDHIGQ--CKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~-~~~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~--~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
..++||+++||+|.. ...+.+++++.+ .+|||||++||++|+.+.. .+|+.|++.++++...+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 468999999999863 456778888876 7999999999999887654 68999999999998889999999999996
Q ss_pred CCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC---CCChHHHHHHHHHhhccccCCCCeEEEE
Q 013955 209 SIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (433)
Q Consensus 209 ~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (433)
...... ....+..++.++........+.||+|++|++|||+|||.... ....+|++||+++|+++++++.+|+||+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 160 (294)
T cd00839 82 YNFSFY-KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVM 160 (294)
T ss_pred cCCCCc-ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEE
Confidence 432210 011111122233222333457899999999999999998654 4579999999999999866566899999
Q ss_pred ecccccCCCCCCCC--CChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCc--------cCCCccEEEEECCCCCC
Q 013955 286 LHVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--------PDPCGAVYITIGDGGNK 355 (433)
Q Consensus 286 ~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~--------~~~~g~~yi~~G~gG~~ 355 (433)
+|+|+++....... .....++.|.+||++++|+++|+||+|.|+|+.|+++++ .+++|++||++|+||+.
T Consensus 161 ~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~ 240 (294)
T cd00839 161 GHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGND 240 (294)
T ss_pred eccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccc
Confidence 99999987653322 234678999999999999999999999999999998765 36789999999999998
Q ss_pred CcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEEe
Q 013955 356 EGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS 412 (433)
Q Consensus 356 ~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~~ 412 (433)
.+..... .+.++|++++...+||++|++.++|+|+++|+++.+|+ |+|+|+|+|
T Consensus 241 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 241 EGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred cCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 7532111 23368899998999999999998889999999987775 999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=288.61 Aligned_cols=255 Identities=17% Similarity=0.224 Sum_probs=188.7
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHh-----hcCCCceEEccccccccccc---hhhHHH-hhhhhhhhh--hCCCceecc
Q 013955 134 QFPITFAVAGDLGQTGWTKSTLDHI-----GQCKYDVHLLPGDLSYADYM---QHRWDT-FGELVQPLA--SARPWMVTQ 202 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~l~~i-----~~~~pd~vl~~GD~~~~~~~---~~~w~~-~~~~~~~l~--~~iP~~~v~ 202 (433)
...++|+++||+|.+...|..+++. ++.++||||.+||+++++.. +.+|+. |.+...... ..+||+.++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vL 103 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVL 103 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeC
Confidence 7889999999999876666554432 36799999999999843322 456765 434443333 359999999
Q ss_pred CCCcCCCCCccccc-cc------------------ccccccccCCCCCCCCCCceEEE----Ee-------------CeE
Q 013955 203 GNHEKESIPLIMDA-FQ------------------SYNARWKMPFEESGSNSNLYYSF----DV-------------AGA 246 (433)
Q Consensus 203 GNHD~~~~~~~~~~-~~------------------~y~~~~~~p~~~~~~~~~~~ys~----~~-------------g~v 246 (433)
||||+.++..++-. +. ....||.||. .||.+ .. ..+
T Consensus 104 GNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~v 175 (394)
T PTZ00422 104 GQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMSV 175 (394)
T ss_pred CcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCEE
Confidence 99999776554321 11 1135788884 67754 21 238
Q ss_pred EEEEEcccCC-----C-CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEE
Q 013955 247 HLIMLGSYAD-----Y-DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLV 320 (433)
Q Consensus 247 ~fi~lds~~~-----~-~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~Vdlv 320 (433)
.||++||... + .....|++||+++|+.+.+ .++|+||++|||+|+++. + +....+++.|+|||++|+||++
T Consensus 176 ~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k-~a~WkIVvGHhPIySsG~-h-g~~~~L~~~L~PLL~ky~VdlY 252 (394)
T PTZ00422 176 AFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPK-IADYIIVVGDKPIYSSGS-S-KGDSYLSYYLLPLLKDAQVDLY 252 (394)
T ss_pred EEEEEECchhcccCCccccCHHHHHHHHHHHHhhcc-CCCeEEEEecCceeecCC-C-CCCHHHHHHHHHHHHHcCcCEE
Confidence 9999999531 1 1247899999999976543 678999999999999875 2 3334578899999999999999
Q ss_pred EecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCC
Q 013955 321 LAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDD 400 (433)
Q Consensus 321 lsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g 400 (433)
|+||+|++|+.. .+|+.||++|+||...+. .. ...+++.|....+||+.+++ +.+.++++|++..+|
T Consensus 253 isGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~--~~--~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G 319 (394)
T PTZ00422 253 ISGYDRNMEVLT--------DEGTAHINCGSGGNSGRK--SI--MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG 319 (394)
T ss_pred EEccccceEEec--------CCCceEEEeCccccccCC--CC--CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC
Confidence 999999999975 358999999999876432 11 22455788888999999997 456899999974567
Q ss_pred CCeeeeEEEEEeCC
Q 013955 401 EPVRSDQLWITSLV 414 (433)
Q Consensus 401 ~~~v~d~f~i~~~~ 414 (433)
+ +++++++.+..
T Consensus 320 k--vL~~~~~~~~~ 331 (394)
T PTZ00422 320 E--VLYTHKQPLKK 331 (394)
T ss_pred c--EEEEeeecccc
Confidence 6 99999997763
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=269.34 Aligned_cols=241 Identities=22% Similarity=0.373 Sum_probs=173.1
Q ss_pred eEEEEEecCCCC-CChHH-H---HH-HhhcCCCceEEccccccccccc----hhhH-HHhhhhhhhhhhCCCceeccCCC
Q 013955 137 ITFAVAGDLGQT-GWTKS-T---LD-HIGQCKYDVHLLPGDLSYADYM----QHRW-DTFGELVQPLASARPWMVTQGNH 205 (433)
Q Consensus 137 ~~f~~~gD~~~~-~~~~~-~---l~-~i~~~~pd~vl~~GD~~~~~~~----~~~w-~~~~~~~~~l~~~iP~~~v~GNH 205 (433)
++|+++||+|.. ...+. + +. .+++.+|||||++||++|.++. ...| +.|.+.+..+...+|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 489999999976 23222 2 22 2235799999999999987754 1234 33445555444569999999999
Q ss_pred cCCCCCcccccccc--cccccccCCCCCCCCCCceEEEEeC------eEEEEEEcccCCC---------------CCChH
Q 013955 206 EKESIPLIMDAFQS--YNARWKMPFEESGSNSNLYYSFDVA------GAHLIMLGSYADY---------------DEYSD 262 (433)
Q Consensus 206 D~~~~~~~~~~~~~--y~~~~~~p~~~~~~~~~~~ys~~~g------~v~fi~lds~~~~---------------~~~~~ 262 (433)
|..........+.. +..+|.+| ..||+|+++ +++||+|||.... ....+
T Consensus 81 D~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~ 152 (277)
T cd07378 81 DYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEE 152 (277)
T ss_pred ccCCCchheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHH
Confidence 99643221111111 12333333 578999988 7999999996431 13589
Q ss_pred HHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCC
Q 013955 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPC 342 (433)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 342 (433)
|++||+++|++++ .+|+||++|||+++.... ......++.|.+++++++|+++|+||.|.+++..+. ..
T Consensus 153 Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~--~~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~------~~ 221 (277)
T cd07378 153 QLAWLEKTLAAST---ADWKIVVGHHPIYSSGEH--GPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDD------GS 221 (277)
T ss_pred HHHHHHHHHHhcC---CCeEEEEeCccceeCCCC--CCcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecC------CC
Confidence 9999999999874 379999999999876532 122457889999999999999999999999988641 35
Q ss_pred ccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEe
Q 013955 343 GAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRN 397 (433)
Q Consensus 343 g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~ 397 (433)
++.||++|+||...+.........|.|..++...+||.+|+|.. ++++++|++.
T Consensus 222 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~~ 275 (277)
T cd07378 222 GTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYDA 275 (277)
T ss_pred CcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEECC
Confidence 99999999998876542222222345778888899999999965 5799999974
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-29 Score=234.37 Aligned_cols=227 Identities=19% Similarity=0.284 Sum_probs=161.3
Q ss_pred CCCeEEEEEecCCCCC---C--------------hHHHHHHhhcC--CCceEEccccccccccch----hhHHHhhhhhh
Q 013955 134 QFPITFAVAGDLGQTG---W--------------TKSTLDHIGQC--KYDVHLLPGDLSYADYMQ----HRWDTFGELVQ 190 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~---~--------------~~~~l~~i~~~--~pd~vl~~GD~~~~~~~~----~~w~~~~~~~~ 190 (433)
+++++|++++|+|.+. . .+.+++.+.+. +||+||++||+++.+... .+|+.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 4689999999998762 1 12344555555 999999999999876542 34556666666
Q ss_pred hhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC------CCChHHH
Q 013955 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY------DEYSDQY 264 (433)
Q Consensus 191 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------~~~~~Q~ 264 (433)
.+...+|+++++||||....+. ...+..|...| +..||++++|+++||+|||.... ....+|+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~-~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ql 150 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT-EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQD 150 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC-hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHHH
Confidence 6655699999999999954322 11122232222 24688999999999999996432 2347999
Q ss_pred HHHHHHhhccccCCCCeEEEEecccccCCCCCCC----CCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccC
Q 013955 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ----GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD 340 (433)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~ 340 (433)
+||+++|+++++.+.+++||++|+|++....... ......++.|.++|++++|+++||||+|.+.+..
T Consensus 151 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~-------- 222 (262)
T cd07395 151 VWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR-------- 222 (262)
T ss_pred HHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE--------
Confidence 9999999998633456899999999986443211 1123567899999999999999999999987643
Q ss_pred CCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEE
Q 013955 341 PCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHR 396 (433)
Q Consensus 341 ~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~ 396 (433)
-+|+.|++++++|... . ....||..+++.. +.++++|++
T Consensus 223 ~~g~~~~~~~~~~~~~------~----------~~~~g~~~~~v~~-~~~~~~~~~ 261 (262)
T cd07395 223 YGGLEMVVTSAIGAQL------G----------NDKSGLRIVKVTE-DKIVHEYYS 261 (262)
T ss_pred ECCEEEEEcCceeccc------C----------CCCCCcEEEEECC-Cceeeeeee
Confidence 2478888887776431 1 1247999999954 457888875
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=221.61 Aligned_cols=264 Identities=20% Similarity=0.325 Sum_probs=174.3
Q ss_pred EEECCCC-CCCeEEEEEecCCCCCC-hHHHHH----Hh-hcCCCceEEccccccccccchhhHH----H-hhhhhhhhhh
Q 013955 127 EFKTPPA-QFPITFAVAGDLGQTGW-TKSTLD----HI-GQCKYDVHLLPGDLSYADYMQHRWD----T-FGELVQPLAS 194 (433)
Q Consensus 127 ~F~T~p~-~~~~~f~~~gD~~~~~~-~~~~l~----~i-~~~~pd~vl~~GD~~~~~~~~~~w~----~-~~~~~~~l~~ 194 (433)
++.-|+. ++.++|+++||+|..+. .+..++ .| +..++||||.+||++|.++.....| . |.+....-.-
T Consensus 33 ~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL 112 (336)
T KOG2679|consen 33 RLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL 112 (336)
T ss_pred hhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc
Confidence 3444444 68899999999986543 333222 22 3679999999999999988743333 2 2222211112
Q ss_pred CCCceeccCCCcCCCCCccccc--ccccccccccCCCCCCCCCCceEE----EE--eCeEEEEEEcccCC-------CC-
Q 013955 195 ARPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYS----FD--VAGAHLIMLGSYAD-------YD- 258 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~--~~~y~~~~~~p~~~~~~~~~~~ys----~~--~g~v~fi~lds~~~-------~~- 258 (433)
+.|||.++||||+.++-.++-. +.....||..|. .+|. .+ .-++.++++|+... +.
T Consensus 113 QkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~ 184 (336)
T KOG2679|consen 113 QKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRG 184 (336)
T ss_pred ccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheeccccccccccc
Confidence 3799999999999887654433 455566776663 2221 11 11234444444211 11
Q ss_pred ------CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 259 ------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 259 ------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
....++.||+..|+++ .++|+||++|||+.+.+ +.+...++.+.|.|+|++++||++++||+|+.|...
T Consensus 185 v~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis 259 (336)
T KOG2679|consen 185 VLPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQHIS 259 (336)
T ss_pred CChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhhcc
Confidence 1268899999999998 67899999999998765 346667899999999999999999999999999875
Q ss_pred eccCCccCCCccEEEEECCCCCCCcccccCC-CCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 333 RVNNGKPDPCGAVYITIGDGGNKEGLARKYK-NPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 333 ~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~-~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
.. ..++-|+++|+|..... ..+.. .-.|+.-.|.-..-||..+++. ...+++.|++. .|+ ++.+....
T Consensus 260 ~~------e~~iqf~tSGagSkaw~-g~~~~~~~~p~~lkF~YdgqGfmsv~is-~~e~~vvfyD~-~G~--~Lhk~~t~ 328 (336)
T KOG2679|consen 260 SP------ESGIQFVTSGAGSKAWR-GTDHNPEVNPKELKFYYDGQGFMSVEIS-HSEARVVFYDV-SGK--VLHKWSTS 328 (336)
T ss_pred CC------CCCeeEEeeCCcccccC-CCccCCccChhheEEeeCCCceEEEEEe-cceeEEEEEec-cCc--eEEEeecc
Confidence 31 34677787777654321 11111 1123323344446699999985 46799999974 465 88887665
Q ss_pred eCC
Q 013955 412 SLV 414 (433)
Q Consensus 412 ~~~ 414 (433)
|+.
T Consensus 329 kr~ 331 (336)
T KOG2679|consen 329 KRS 331 (336)
T ss_pred ccc
Confidence 553
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-24 Score=215.66 Aligned_cols=293 Identities=20% Similarity=0.263 Sum_probs=149.4
Q ss_pred eecCeEEEEEeCCCCCCCEEEEEecc-----cCCeeEEECCCC--CCCeEEEEEecCCCCCChHHHHHHhhc-CCCceEE
Q 013955 96 YRSGKIHHTVIGPLEHDTVYFYRCGR-----QGPEFEFKTPPA--QFPITFAVAGDLGQTGWTKSTLDHIGQ-CKYDVHL 167 (433)
Q Consensus 96 ~~~~~~~~v~l~~L~p~t~Y~Y~v~~-----~s~~~~F~T~p~--~~~~~f~~~gD~~~~~~~~~~l~~i~~-~~pd~vl 167 (433)
....+.+++.|+||+|+|.|+||+.. .+..++|||+|. ..++||++++|.+.......+++.+.+ .+|||+|
T Consensus 58 ~~~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 58 AERDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GGGTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred cCCCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 35679999999999999999999875 357899999986 357999999999765445678888887 6999999
Q ss_pred ccccccccccc---------------------------hhhHHHh--hhhhhhhhhCCCceeccCCCcCCCCCccc----
Q 013955 168 LPGDLSYADYM---------------------------QHRWDTF--GELVQPLASARPWMVTQGNHEKESIPLIM---- 214 (433)
Q Consensus 168 ~~GD~~~~~~~---------------------------~~~w~~~--~~~~~~l~~~iP~~~v~GNHD~~~~~~~~---- 214 (433)
++||.+|.+.. ...|..+ ...++.+.+.+|++.++.+||+.++....
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999998752 0011111 12345566779999999999996443210
Q ss_pred -------------ccccccccccccCCCC---CCCCCCceEEEEeCe-EEEEEEcccCCCC-------------------
Q 013955 215 -------------DAFQSYNARWKMPFEE---SGSNSNLYYSFDVAG-AHLIMLGSYADYD------------------- 258 (433)
Q Consensus 215 -------------~~~~~y~~~~~~p~~~---~~~~~~~~ys~~~g~-v~fi~lds~~~~~------------------- 258 (433)
..+..|... +|... .+.....|++|.+|+ +.|++||+.....
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~ 295 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSR 295 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT-
T ss_pred ccccccchHHHHHHHHHHHHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCcc
Confidence 011122111 22210 112346788999999 9999999953211
Q ss_pred --CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCC-----------CCCCChhHHHHHHHHHHHcCCc--EEEec
Q 013955 259 --EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA-----------HQGEGDGMMAIMEPLLYAASVD--LVLAG 323 (433)
Q Consensus 259 --~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~l~~~~~Vd--lvlsG 323 (433)
.+.+|++||++.|+++ .++|+|+..-.|+...... ....-...|+.|.++|.+.++. ++|+|
T Consensus 296 ~mLG~~Q~~wL~~~L~~s---~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSG 372 (453)
T PF09423_consen 296 TMLGEEQWDWLEDWLASS---QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSG 372 (453)
T ss_dssp -SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-
T ss_pred CcCCHHHHHHHHHHHhcC---CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEec
Confidence 2689999999999987 4789999998887543321 0111135789999999988764 89999
Q ss_pred CcccceeeeeccCCcc--CCC-c-cEEEEECCCCCCCc---c----cccCCCCCCCcceeEeccccEEEEEEEcCceEEE
Q 013955 324 HVHAYERSIRVNNGKP--DPC-G-AVYITIGDGGNKEG---L----ARKYKNPQPDWSVFREASFGHGELKIVNSTHAFW 392 (433)
Q Consensus 324 H~H~y~r~~~~~~~~~--~~~-g-~~yi~~G~gG~~~~---~----~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~ 392 (433)
+.|.........+... ... . .+-+++++-.+... . ...+....|.........+||..|++.. ..++.
T Consensus 373 DvH~~~~~~~~~~~~~~~~~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~~~-~~~~~ 451 (453)
T PF09423_consen 373 DVHASAASRIPPDDADPPDGPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDITP-ERVTA 451 (453)
T ss_dssp SSSSEEEEEEESSTT---TTS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEEET-TEEEE
T ss_pred CcchheeeecccccccccCCCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEEcc-ceEEE
Confidence 9999765543322211 111 1 22344443222111 0 0001112343233344689999999865 46777
Q ss_pred EE
Q 013955 393 SW 394 (433)
Q Consensus 393 ~~ 394 (433)
+|
T Consensus 452 ~~ 453 (453)
T PF09423_consen 452 EW 453 (453)
T ss_dssp EE
T ss_pred EC
Confidence 65
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=203.20 Aligned_cols=217 Identities=23% Similarity=0.267 Sum_probs=150.1
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHhhcC--CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceecc
Q 013955 138 TFAVAGDLGQTGWT-------------KSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (433)
Q Consensus 138 ~f~~~gD~~~~~~~-------------~~~l~~i~~~--~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~ 202 (433)
||++++|+|.+... +++++.+.+. +||+||++||+++.... ..|+.+.+.++.+ .+|++.++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~~--~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP-ESYERLRELLAAL--PIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH-HHHHHHHHHHhhc--CCCEEEeC
Confidence 68999999976431 3455555555 99999999999987553 4566666666655 59999999
Q ss_pred CCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhhccccCC
Q 013955 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRKK 278 (433)
Q Consensus 203 GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~~~~~~~ 278 (433)
||||... .+ ...+.... ...+..+|+|+.++++|++||+.... ....+|++||++.|++..
T Consensus 78 GNHD~~~------~~---~~~~~~~~---~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~~~--- 142 (240)
T cd07402 78 GNHDDRA------AM---RAVFPELP---PAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALAEAP--- 142 (240)
T ss_pred CCCCCHH------HH---HHhhcccc---ccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHHhCC---
Confidence 9999842 11 11221110 01235688999999999999986432 135789999999999874
Q ss_pred CCeEEEEecccccCCCCCCC-CCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCC
Q 013955 279 TPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKE 356 (433)
Q Consensus 279 ~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~ 356 (433)
.+++|+++|+|++....... ......++.+.+++.++ +|+++|+||.|...... -+|+.++++|+.|...
T Consensus 143 ~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs~~~~~ 214 (240)
T cd07402 143 DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--------WGGIPLLTAPSTCHQF 214 (240)
T ss_pred CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--------ECCEEEEEcCcceeee
Confidence 23589999999876543111 11112468899999999 99999999999976554 2588889988877642
Q ss_pred cccccCCCCCCCcceeEeccccEEEEEEEcC
Q 013955 357 GLARKYKNPQPDWSVFREASFGHGELKIVNS 387 (433)
Q Consensus 357 ~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 387 (433)
....+. ..+.+..+||..+.+.++
T Consensus 215 ------~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 215 ------APDLDD-FALDALAPGYRALSLHED 238 (240)
T ss_pred ------cCCCCc-ccccccCCCCcEEEEecC
Confidence 222222 333345689988887543
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=205.10 Aligned_cols=193 Identities=19% Similarity=0.246 Sum_probs=134.0
Q ss_pred eEEEEEecCCCCCC--------------hHHHHHHhhcCCCceEEccccccccccc--hhhHHHhhhhhhhhhhCCCcee
Q 013955 137 ITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~--------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~--~~~w~~~~~~~~~l~~~iP~~~ 200 (433)
|||++++|+|.... ..++++.+++.+||+||++||+++.+.. ...|+.+.+.+..+ .+|+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~~ 78 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVHH 78 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEEE
Confidence 69999999995432 1345666767789999999999976553 13455555555444 389999
Q ss_pred ccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC------------------------
Q 013955 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------------------ 256 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------------------ 256 (433)
++||||...... .+.. . .. ....+..||+|++++++||+||+...
T Consensus 79 v~GNHD~~~~~~------~~~~-~-~~---~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T cd07396 79 VLGNHDLYNPSR------EYLL-L-YT---LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLY 147 (267)
T ss_pred ecCccccccccH------hhhh-c-cc---ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhh
Confidence 999999964211 0110 0 00 01124579999999999999999531
Q ss_pred ----------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCc
Q 013955 257 ----------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHV 325 (433)
Q Consensus 257 ----------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~ 325 (433)
.....+|++||+++|+++..+ ..++||++|+|++...... ......++.+.++++++ +|+++|+||+
T Consensus 148 ~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~ 225 (267)
T cd07396 148 LSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKACISGHD 225 (267)
T ss_pred ccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEEEcCCc
Confidence 123479999999999987542 2458999999987654311 11112357889999996 7999999999
Q ss_pred ccceeeeeccCCccCCCccEEEEECCC
Q 013955 326 HAYERSIRVNNGKPDPCGAVYITIGDG 352 (433)
Q Consensus 326 H~y~r~~~~~~~~~~~~g~~yi~~G~g 352 (433)
|.+.... .+|+.|+++|+-
T Consensus 226 H~~~~~~--------~~gi~~~~~~a~ 244 (267)
T cd07396 226 HEGGYAQ--------RHGIHFLTLEGM 244 (267)
T ss_pred CCCCccc--------cCCeeEEEechh
Confidence 9987543 358889988764
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=198.70 Aligned_cols=238 Identities=19% Similarity=0.186 Sum_probs=151.0
Q ss_pred EECCCC-CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhh
Q 013955 128 FKTPPA-QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191 (433)
Q Consensus 128 F~T~p~-~~~~~f~~~gD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~ 191 (433)
.++.+. ..+++|++++|+|.... .+++++.+++ .+|||||++||+++.+. ...++.+.+.++.
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~~ 83 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIAP 83 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHhh
Confidence 456554 57899999999996321 1344555543 47999999999998654 3456666666655
Q ss_pred hhhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHH
Q 013955 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWL 267 (433)
Q Consensus 192 l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL 267 (433)
+ .+|++.++||||... .+..+.....+ ...++.+..++++||+|||.... ..+.+|++||
T Consensus 84 l--~~Pv~~v~GNHD~~~------~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~wL 147 (275)
T PRK11148 84 L--RKPCVWLPGNHDFQP------AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEWL 147 (275)
T ss_pred c--CCcEEEeCCCCCChH------HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHHH
Confidence 5 389999999999842 11111111111 11233344556999999996422 2358999999
Q ss_pred HHHhhccccCCCCeEEEEecccccCCCCCCC-CCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccE
Q 013955 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAV 345 (433)
Q Consensus 268 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~ 345 (433)
+++|++.+. +..||+.|||+......+. .......+.|.++++++ +|+++|+||+|...... -+|+.
T Consensus 148 ~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~--------~~gi~ 216 (275)
T PRK11148 148 ERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD--------WNGRR 216 (275)
T ss_pred HHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce--------ECCEE
Confidence 999998743 2356666665544332211 11122457899999998 89999999999864332 25888
Q ss_pred EEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCC
Q 013955 346 YITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDD 400 (433)
Q Consensus 346 yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g 400 (433)
++++++.+.. +....+.+ .+.....||..+++.++..+..+.++.+.+
T Consensus 217 ~~~~ps~~~q------~~~~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 217 LLATPSTCVQ------FKPHCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred EEEcCCCcCC------cCCCCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 8877765532 11111121 122335799999997666687777776543
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.4e-22 Score=187.93 Aligned_cols=186 Identities=17% Similarity=0.226 Sum_probs=124.5
Q ss_pred EEEEecCCCCCCh--------HHHHHHhhcCCCceEEcccccccccc--------chhhHHHhhhhhhhhhh--CCCcee
Q 013955 139 FAVAGDLGQTGWT--------KSTLDHIGQCKYDVHLLPGDLSYADY--------MQHRWDTFGELVQPLAS--ARPWMV 200 (433)
Q Consensus 139 f~~~gD~~~~~~~--------~~~l~~i~~~~pd~vl~~GD~~~~~~--------~~~~w~~~~~~~~~l~~--~iP~~~ 200 (433)
|+.++|+|.+... ..+++.+++.+||++|++||+++... ...+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999876542 12345667889999999999997543 13467777776654432 489999
Q ss_pred ccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEE--EeCeEEEEEEcccCC----------CCCChHHHHHHH
Q 013955 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSF--DVAGAHLIMLGSYAD----------YDEYSDQYRWLK 268 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~--~~g~v~fi~lds~~~----------~~~~~~Q~~WL~ 268 (433)
++||||..+..........|.+..... .....+|.+ ..|+++||+|||... ....++|++||+
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~-----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~ 156 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATG-----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLE 156 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheec-----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHH
Confidence 999999965432111111122111111 001233333 358999999999642 123589999999
Q ss_pred HHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeecc
Q 013955 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVN 335 (433)
Q Consensus 269 ~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~ 335 (433)
+.|+++.+ .+++||++|+|+....... .. ....+.++|++++|+++||||.|.+++..|+.
T Consensus 157 ~~L~~~~~--~~~~IV~~HhP~~~~~~~~---~~-~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 157 KELEKSTN--SNYTIWFGHYPTSTIISPS---AK-SSSKFKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHhccc--CCeEEEEEcccchhccCCC---cc-hhHHHHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 99998643 3579999999986532211 11 22239999999999999999999999866653
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=185.39 Aligned_cols=279 Identities=24% Similarity=0.327 Sum_probs=183.7
Q ss_pred ceEEEEecC-CCcEEEEEEcCC-C------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 44 QQVHISLAG-DSHMRVTWITDD-E------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 44 ~qv~l~~~~-~~~~~i~W~t~~-~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.+.-|+.++ ...-.|.|..-. . +.+..+|+.+.++..+.+..+.... .....+.+++.++||+|++.|
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~~~y 114 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPDQDY 114 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCCceE
Confidence 455456555 334445665432 1 3445677777765444443333211 135578999999999999999
Q ss_pred EEEecc---cCCeeEEECCCC-CCCeEEEEEecCCCCCC---hHHHHHHhhcCCCceEEccccccccccchhh------H
Q 013955 116 FYRCGR---QGPEFEFKTPPA-QFPITFAVAGDLGQTGW---TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR------W 182 (433)
Q Consensus 116 ~Y~v~~---~s~~~~F~T~p~-~~~~~f~~~gD~~~~~~---~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~------w 182 (433)
+||+.. .+.+++|||+|+ ...++|+.++|.....+ .-.+.+.|.+.+|||+||+||.+|+.+.... |
T Consensus 115 fYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~ 194 (522)
T COG3540 115 FYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSW 194 (522)
T ss_pred EEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccc
Confidence 999865 368899999997 56788888888755544 3467788889999999999999998765211 1
Q ss_pred ----------------HHhh---------hhhhhhhhCCCceeccCCCcCCCCCcc--cc--------cc-----ccccc
Q 013955 183 ----------------DTFG---------ELVQPLASARPWMVTQGNHEKESIPLI--MD--------AF-----QSYNA 222 (433)
Q Consensus 183 ----------------~~~~---------~~~~~l~~~iP~~~v~GNHD~~~~~~~--~~--------~~-----~~y~~ 222 (433)
+.+. +-++......||++.+.+||..++-.. .+ .+ .+++.
T Consensus 195 ~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qA 274 (522)
T COG3540 195 KNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQA 274 (522)
T ss_pred cccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHH
Confidence 1111 123334456999999999999654211 00 01 11222
Q ss_pred cc-ccCCCCCC--CCCCceEEEEeCe-EEEEEEcccCCC------C----------------CChHHHHHHHHHhhcccc
Q 013955 223 RW-KMPFEESG--SNSNLYYSFDVAG-AHLIMLGSYADY------D----------------EYSDQYRWLKDDLSKVDR 276 (433)
Q Consensus 223 ~~-~~p~~~~~--~~~~~~ys~~~g~-v~fi~lds~~~~------~----------------~~~~Q~~WL~~~L~~~~~ 276 (433)
++ .||-.... .....|-+|.||+ +.|.+||+.... + .+..|.+||+..|..+
T Consensus 275 yyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S-- 352 (522)
T COG3540 275 YYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS-- 352 (522)
T ss_pred HHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc--
Confidence 21 24432211 1247888999999 579999985432 1 2689999999999997
Q ss_pred CCCCeEEEEecccccC----CC---CCC----CC-C-ChhHHHHHHHHHHHcCCc--EEEecCcccce
Q 013955 277 KKTPWLLVLLHVPWYN----SN---EAH----QG-E-GDGMMAIMEPLLYAASVD--LVLAGHVHAYE 329 (433)
Q Consensus 277 ~~~~~~iv~~H~P~~~----~~---~~~----~~-~-~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~ 329 (433)
++.|+|+..-.|+-. .. .+. .+ + -...|+.|+.++...++. ++|+|.+|...
T Consensus 353 -katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 353 -KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred -chhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 778999988887621 11 000 01 1 124688999999998765 89999999753
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-21 Score=175.37 Aligned_cols=150 Identities=20% Similarity=0.232 Sum_probs=111.4
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh-hCCCceeccCCCc
Q 013955 137 ITFAVAGDLGQTGWT---------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNHE 206 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~---------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNHD 206 (433)
|||++++|+|..... +.+++.+.+.+||+||++||+++.+....+|+.+.+.++.+. ..+|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999864331 223344456789999999999987764568888888888886 4699999999999
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEe
Q 013955 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (433)
Q Consensus 207 ~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (433)
. ++.+|+. ...+|++||+++|++.+. +++||++
T Consensus 81 ~----------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~~~---~~~iv~~ 113 (214)
T cd07399 81 L----------------------------------------VLALEFG----PRDEVLQWANEVLKKHPD---RPAILTT 113 (214)
T ss_pred c----------------------------------------hhhCCCC----CCHHHHHHHHHHHHHCCC---CCEEEEe
Confidence 3 1222221 248999999999998642 3589999
Q ss_pred cccccCCCCCCCCC-----ChhHHHHHHHHHHHc-CCcEEEecCcccceeeee
Q 013955 287 HVPWYNSNEAHQGE-----GDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIR 333 (433)
Q Consensus 287 H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~ 333 (433)
|+|++......... .....+.|.++++++ +|+++|+||.|.+.+...
T Consensus 114 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 114 HAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred cccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 99998654322111 123456788999999 799999999999877653
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=174.25 Aligned_cols=188 Identities=22% Similarity=0.296 Sum_probs=124.3
Q ss_pred EEecCCCCCC---hHHHHHHhhcC--CCceEEccccccccccchh--------hHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 141 VAGDLGQTGW---TKSTLDHIGQC--KYDVHLLPGDLSYADYMQH--------RWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 141 ~~gD~~~~~~---~~~~l~~i~~~--~pd~vl~~GD~~~~~~~~~--------~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
-+|+.+.... .+.+++.+++. +|||||++||++..+.... .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 4555554332 34567777765 9999999999998765421 134445555555567999999999999
Q ss_pred CCCCccc------ccccccccccc--cCCCCC-CCCCCceEEEE-eCeEEEEEEcccCCC-----------CCChHHHHH
Q 013955 208 ESIPLIM------DAFQSYNARWK--MPFEES-GSNSNLYYSFD-VAGAHLIMLGSYADY-----------DEYSDQYRW 266 (433)
Q Consensus 208 ~~~~~~~------~~~~~y~~~~~--~p~~~~-~~~~~~~ys~~-~g~v~fi~lds~~~~-----------~~~~~Q~~W 266 (433)
....... ..+..+...|. ++.+.. ....+.||++. .++++||+|||.... ....+|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 6432110 11111222221 221110 11246789988 889999999996422 124789999
Q ss_pred HHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcC--CcEEEecCcccceeee
Q 013955 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAYERSI 332 (433)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y~r~~ 332 (433)
|+++|+++++++ ..++|++|+|+....... .....+.|.+++++|+ |.++|+||+|..+...
T Consensus 202 L~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 202 LEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred HHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 999999986533 348899999987653321 1246789999999997 7789999999876543
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=156.42 Aligned_cols=168 Identities=20% Similarity=0.271 Sum_probs=108.6
Q ss_pred HHHHHhh-cCCCceEEccccccccccc--hhhHHH----hhhhhhhhhhCCCceeccCCCcCCCCCcc-ccccccccccc
Q 013955 153 STLDHIG-QCKYDVHLLPGDLSYADYM--QHRWDT----FGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARW 224 (433)
Q Consensus 153 ~~l~~i~-~~~pd~vl~~GD~~~~~~~--~~~w~~----~~~~~~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~~y~~~~ 224 (433)
+.++.+. ..+||+||++||+++.+.. ..+|.. |.+.+.++...+|++.++||||+...... ......|.+.|
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~F 114 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYF 114 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHh
Confidence 3344443 5689999999999987543 234532 33333333234799999999998532211 01223344444
Q ss_pred ccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-----CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCC
Q 013955 225 KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299 (433)
Q Consensus 225 ~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 299 (433)
. ..++++++|+++||+||+.... ....+|.+||++.|+.... ..+ +||++|+|+|.......+
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEeccccccCCCCCCC
Confidence 2 3468899999999999996421 2346799999999987643 333 899999999865432111
Q ss_pred ---C---------Ch----h-HHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 300 ---E---------GD----G-MMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 300 ---~---------~~----~-~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
+ +. . ..+.-..||++.++.+||+||+|.|-...
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 0 00 0 12344477788899999999999985543
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-18 Score=152.48 Aligned_cols=188 Identities=22% Similarity=0.176 Sum_probs=102.2
Q ss_pred eEEEEEecCCCCCChH-----HHHHHhhcCCCceEEccccccccccchhhHHHhh-hhhhhhhhCCCceeccCCCcCCCC
Q 013955 137 ITFAVAGDLGQTGWTK-----STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG-ELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~-----~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~-~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
+||+++||+|...... .........++|+||++||+++.+.....+.... .........+|+++++||||+...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 6999999999775432 2333445889999999999999887644443322 122334456999999999999532
Q ss_pred Cccccccccccccc-ccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCC---hHHHHHHHHHhhccccCCCCeEEEEe
Q 013955 211 PLIMDAFQSYNARW-KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY---SDQYRWLKDDLSKVDRKKTPWLLVLL 286 (433)
Q Consensus 211 ~~~~~~~~~y~~~~-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (433)
.... ......... .................................... ..++.|+...++.. ..+++||++
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iv~~ 156 (200)
T PF00149_consen 81 NSFY-GFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAK---NDDPVIVFT 156 (200)
T ss_dssp HHHH-HHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEE---EESEEEEEE
T ss_pred cccc-ccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccc---cccceeEEE
Confidence 1100 000000000 000000000000001111111222222111111111 23333333343332 456899999
Q ss_pred cccccCCCCCCCC--CChhHHHHHHHHHHHcCCcEEEecCcccc
Q 013955 287 HVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (433)
Q Consensus 287 H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 328 (433)
|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 157 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 157 HHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999876543211 11246789999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.5e-17 Score=150.02 Aligned_cols=190 Identities=17% Similarity=0.213 Sum_probs=116.6
Q ss_pred EEEecCCCCC--------Ch---HHHHHHhhcC------CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceecc
Q 013955 140 AVAGDLGQTG--------WT---KSTLDHIGQC------KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (433)
Q Consensus 140 ~~~gD~~~~~--------~~---~~~l~~i~~~------~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~ 202 (433)
.+++|+|... .. ++.++.+.+. +||+||++||+++.... .......+.++.+ ..|+++|+
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~-~~~~~~l~~l~~l--~~~v~~V~ 78 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL-EEAKLDLAWIDAL--PGTKVLLK 78 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh-HHHHHHHHHHHhC--CCCeEEEe
Confidence 5789998662 22 3444544433 99999999999864432 2222222233332 25789999
Q ss_pred CCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC----C-------------CCChHHHH
Q 013955 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD----Y-------------DEYSDQYR 265 (433)
Q Consensus 203 GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~----~-------------~~~~~Q~~ 265 (433)
||||+... ....+.+.+ +.. +.......++.++++.|++++.... . .....|++
T Consensus 79 GNHD~~~~-----~~~~~~~~l--~~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (232)
T cd07393 79 GNHDYWWG-----SASKLRKAL--EES--RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELE 149 (232)
T ss_pred CCccccCC-----CHHHHHHHH--Hhc--CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHHH
Confidence 99998321 111111111 100 0000012445678899998763211 0 01256899
Q ss_pred HHHHHhhccccCC-CCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCcc
Q 013955 266 WLKDDLSKVDRKK-TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGA 344 (433)
Q Consensus 266 WL~~~L~~~~~~~-~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~ 344 (433)
||++.|+++.... ..++|+++|+|++.... ....+..++++++++++|+||+|..++..|+.. .-+|+
T Consensus 150 ~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~---~~~gi 218 (232)
T cd07393 150 RLELSLKAAKKREKEKIKIVMLHYPPANENG--------DDSPISKLIEEYGVDICVYGHLHGVGRDRAING---ERGGI 218 (232)
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--------CHHHHHHHHHHcCCCEEEECCCCCCcccccccc---eECCE
Confidence 9999999865322 23689999999876532 124678889999999999999999988776531 13578
Q ss_pred EEEEECCC
Q 013955 345 VYITIGDG 352 (433)
Q Consensus 345 ~yi~~G~g 352 (433)
.|.++.++
T Consensus 219 ~~~~~~~~ 226 (232)
T cd07393 219 RYQLVSAD 226 (232)
T ss_pred EEEEEcch
Confidence 88877664
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=154.83 Aligned_cols=114 Identities=20% Similarity=0.299 Sum_probs=79.8
Q ss_pred CCceEEEE-eCeEEEEEEcccCCC-----CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCC-----CCChh
Q 013955 235 SNLYYSFD-VAGAHLIMLGSYADY-----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ-----GEGDG 303 (433)
Q Consensus 235 ~~~~ys~~-~g~v~fi~lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-----~~~~~ 303 (433)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 899999999996431 23599999999999976 335699999999887543211 11112
Q ss_pred HHHHHHHHHHHc-CCcEEEecCcccceeeeecc-CCccCCCccEEEEECC
Q 013955 304 MMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVN-NGKPDPCGAVYITIGD 351 (433)
Q Consensus 304 ~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~-~~~~~~~g~~yi~~G~ 351 (433)
..++|.++|+++ +|.++|+||.|......-.. ++.....|...|.+++
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 357899999999 79999999999876443111 1111123666676653
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=145.28 Aligned_cols=150 Identities=21% Similarity=0.255 Sum_probs=100.0
Q ss_pred CCeEEEEEecCCCCCCh------------HHHHH-HhhcCCCceEEccccccccccchh-hHHHhhhhhhhhhh-CCCce
Q 013955 135 FPITFAVAGDLGQTGWT------------KSTLD-HIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPLAS-ARPWM 199 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~------------~~~l~-~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~l~~-~iP~~ 199 (433)
+.+||++++|+|..... .+.++ .+...+||+||++||+++...... .+..+.+.++.+.. .+|++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred CceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 36899999999975432 12233 244779999999999998765432 34555556666544 59999
Q ss_pred eccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccc--cC
Q 013955 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVD--RK 277 (433)
Q Consensus 200 ~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~--~~ 277 (433)
+++||||.. ......|++||+++|++.. ..
T Consensus 81 ~~~GNHD~~------------------------------------------------g~l~~~ql~wL~~~l~~~~~~~~ 112 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------DWIRPSQIEWFKETSAALKKKYG 112 (199)
T ss_pred EECccCCCC------------------------------------------------CCCCHHHHHHHHHHHHHHhhccC
Confidence 999999910 1124789999999999863 11
Q ss_pred CCCeEEEEecccccCCCCCCC---------CC---ChhHHHHH-HHHHHHcCCcEEEecCcccceeee
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQ---------GE---GDGMMAIM-EPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~---------~~---~~~~~~~l-~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
...+.++++|+|+......+. .+ .......+ ..+.+..+|+++|+||+|.++...
T Consensus 113 ~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 113 KPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred CCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 234689999999865322111 01 00122334 444466789999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.2e-16 Score=141.49 Aligned_cols=167 Identities=13% Similarity=0.115 Sum_probs=103.7
Q ss_pred EEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccccccc
Q 013955 139 FAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQ 218 (433)
Q Consensus 139 f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~ 218 (433)
++++||+|........ ..+.+.++|+||++||+++.... .....+ +.+.. ..+|++.++||||.... ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~------~~ 69 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK-EAAVEI-NLLLA--IGVPVLAVPGNCDTPEI------LG 69 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH-HHHHHH-HHHHh--cCCCEEEEcCCCCCHHH------HH
Confidence 5789999875322112 34567899999999999976543 122222 22322 24899999999997421 11
Q ss_pred ccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccC
Q 013955 219 SYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (433)
Q Consensus 219 ~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (433)
........ .....+.+++++|+++++... .....+|++|+ +.|+.. ..+.+|+++|+|++.
T Consensus 70 ~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~ilv~H~pp~~ 136 (188)
T cd07392 70 LLTSAGLN---------LHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLILVTHAPPYG 136 (188)
T ss_pred hhhcCcEe---------cCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEEEECCCCcC
Confidence 10000000 011245678899999987422 12346889998 445443 223589999999976
Q ss_pred C-CCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 293 S-NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 293 ~-~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
. ............+.+.+++++++++++|+||.|...
T Consensus 137 ~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 137 TAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 211111111234788899999999999999999864
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.7e-16 Score=144.05 Aligned_cols=190 Identities=18% Similarity=0.125 Sum_probs=113.2
Q ss_pred EEEEEecCCCCCCh-------HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 138 TFAVAGDLGQTGWT-------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 138 ~f~~~gD~~~~~~~-------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
||++++|+|..... +.+++.+.+.++|+||++||++.... ....+.+.+..+ ..+|++.++||||+...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~---~~~~~~~~l~~~-~~~pv~~v~GNHD~~~~ 76 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQ---RSLPFIEKLQEL-KGIKVTFNAGNHDMLKD 76 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchh---hHHHHHHHHHHh-cCCcEEEECCCCCCCCC
Confidence 58999999964211 23556666788999999999996421 122233333322 34899999999998521
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC--------------------------C-----C
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--------------------------D-----E 259 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~--------------------------~-----~ 259 (433)
.. ...+...+. +. .....++.+..++++|++++...++ . .
T Consensus 77 ~~----~~~~~~~~~-~~----~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 147 (239)
T TIGR03729 77 LT----YEEIESNDS-PL----YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPER 147 (239)
T ss_pred CC----HHHHHhccc-hh----hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHHH
Confidence 11 111111110 00 0012233344467888888842211 0 1
Q ss_pred ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC----C--CCCC--ChhHHHHHHHHHHHcCCcEEEecCcccceee
Q 013955 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE----A--HQGE--GDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (433)
Q Consensus 260 ~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~----~--~~~~--~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 331 (433)
..+|++||++.|++... +.+||++|+|+..... . .... .....+.|.+++++++|+++|+||+|.-...
T Consensus 148 ~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~ 224 (239)
T TIGR03729 148 TAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGP 224 (239)
T ss_pred HHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCCCC
Confidence 26789999999988743 2389999998754211 1 1110 0112478999999999999999999986432
Q ss_pred eeccCCccCCCccEEEEEC
Q 013955 332 IRVNNGKPDPCGAVYITIG 350 (433)
Q Consensus 332 ~~~~~~~~~~~g~~yi~~G 350 (433)
.. -+|+.|+.+.
T Consensus 225 ~~-------i~~~~~~~~~ 236 (239)
T TIGR03729 225 LT-------IGGTTYHNRP 236 (239)
T ss_pred EE-------ECCEEEEecC
Confidence 21 1467666543
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-15 Score=144.67 Aligned_cols=179 Identities=23% Similarity=0.310 Sum_probs=118.7
Q ss_pred eEEEEEecCCCC--CC-h----HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 137 ITFAVAGDLGQT--GW-T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 137 ~~f~~~gD~~~~--~~-~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
++|+.++|.|.. .. . .++++.++..+||++|++||+++.+ ....++...++++......|++++|||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~-~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDG-EPEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCC-CHHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 589999999987 22 1 3455677788999999999999874 33555666666664444588999999999864
Q ss_pred CCcccccccccccccccCCCCCCCCCCceEEEEe-CeEEEEEEcccCC----CCCChHHHHHHHHHhhccccCCCCeEEE
Q 013955 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYAD----YDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (433)
Q Consensus 210 ~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~----~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (433)
.. ...+...+.... ..+-.... ++++++.+|+... ...+..|++||++.|++........+|+
T Consensus 80 ~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~ 147 (301)
T COG1409 80 VN-----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVVV 147 (301)
T ss_pred hH-----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccccCceEEE
Confidence 21 121222111110 01111112 6789999999653 2346999999999999876531124677
Q ss_pred EecccccCCCCCCCCCChhHHHHHHHHHHHcC--CcEEEecCcccc
Q 013955 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAY 328 (433)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y 328 (433)
++|||+.................+..++..++ |+++|+||.|..
T Consensus 148 ~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 148 LHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 77777665444322222234467778888888 999999999986
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=125.02 Aligned_cols=132 Identities=27% Similarity=0.298 Sum_probs=94.2
Q ss_pred EEEEecCCCCCChH-----------HHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC-CCceeccCCCc
Q 013955 139 FAVAGDLGQTGWTK-----------STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWMVTQGNHE 206 (433)
Q Consensus 139 f~~~gD~~~~~~~~-----------~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~-iP~~~v~GNHD 206 (433)
|+.++|+|.+.... .+++.+.+.+||+|+++||+++.... .+|+.+.+.++.+... +|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLP-EEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCH-HHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 57899998764321 13445567899999999999987653 5677777777777544 69999999999
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEe
Q 013955 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (433)
Q Consensus 207 ~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (433)
. |+++
T Consensus 80 ~---------------------------------------------------------------------------iv~~ 84 (144)
T cd07400 80 V---------------------------------------------------------------------------IVVL 84 (144)
T ss_pred E---------------------------------------------------------------------------EEEe
Confidence 6 8999
Q ss_pred cccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
|+|++.......... ...+.+.+++++++++++|+||+|...... .. ...+++.++.+|+
T Consensus 85 Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~-~~---~~~~~~~~~~aGs 144 (144)
T cd07400 85 HHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN-IS---NAGGGLVVIGAGT 144 (144)
T ss_pred cCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeee-cc---CCCCCEEEEecCC
Confidence 999877644221111 145789999999999999999999865433 11 1234666776664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.6e-15 Score=134.77 Aligned_cols=168 Identities=21% Similarity=0.146 Sum_probs=102.5
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 136 PITFAVAGDLGQTGW-----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-----~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
++||++++|+|.... .+++++.+.+.+||+|+++||+++...... +.+.+.++.+....|++.++||||+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEECCCcccccC
Confidence 479999999997643 245666677889999999999998665422 3444555555556899999999999643
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccc
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (433)
... ............. ..+....++.++..+..+.... .....+++.+.+++.+. .+++|++.|.|.
T Consensus 79 ~~~--~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~~~--~~~~I~l~H~P~ 145 (223)
T cd07385 79 DEE--NWIEALESAGITV-----LRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGLDE--DDPNILLAHQPD 145 (223)
T ss_pred chH--HHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCCCC--CCCEEEEecCCC
Confidence 221 0001111101110 1133445565654443332111 12223556666666433 346899999984
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeecc
Q 013955 291 YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVN 335 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~ 335 (433)
+.. . +.+.++|++++||+|..|...|..
T Consensus 146 ~~~-------------~----~~~~~~dl~l~GHtHggqi~~~~~ 173 (223)
T cd07385 146 TAE-------------E----AAAWGVDLQLSGHTHGGQIRLPGI 173 (223)
T ss_pred hhH-------------H----hcccCccEEEeccCCCCEEecccc
Confidence 321 1 256789999999999998766543
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.2e-14 Score=133.61 Aligned_cols=168 Identities=20% Similarity=0.177 Sum_probs=99.4
Q ss_pred CCCCeEEEEEecCCCCCC-----hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 133 AQFPITFAVAGDLGQTGW-----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~-----~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
...++|+++++|+|.+.. .+++++.+++.+||+|+++||+++.+.. ..++.+.+.++.+....|+++|+||||+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~-~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMP-LNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCcc-ccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 356799999999997632 2345566678899999999999873322 2345566667777666899999999998
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCceEEEEeCe--EEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEE
Q 013955 208 ESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (433)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (433)
..... ....+.+.+. ..+-.-..+....+..++ +.++++|.... +... ..+.+++ + ..+|++
T Consensus 125 ~~~~~---~~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----~-~~~IlL 188 (271)
T PRK11340 125 PVGTE---KNHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----N-LPRLVL 188 (271)
T ss_pred ccCcc---chHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC----C-CCeEEE
Confidence 53211 0011111110 000000113444455443 66777764211 1111 1112221 2 248999
Q ss_pred ecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeec
Q 013955 286 LHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRV 334 (433)
Q Consensus 286 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~ 334 (433)
.|.|-.- +.+.+.++|++||||+|.-|-..|.
T Consensus 189 ~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 189 AHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred EcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 9999431 1135578999999999998876553
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.3e-14 Score=127.56 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=104.7
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
...|+++++|+|.+.. .+++++.+++.++|+||++||+++.+........+.+.+..+ ..|+++++||||.. ..
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~~V~GNhD~~-v~-- 77 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTFYVPGPQDAP-LW-- 77 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceEEEcCCCChH-HH--
Confidence 4578999999986432 234455555679999999999998653222333333333322 38999999999973 10
Q ss_pred ccccc-ccccccccCCCCCCCCCCceEEEEe-CeEEEEEEcccCCC--CCChHHH----HHHHH----HhhccccCCCCe
Q 013955 214 MDAFQ-SYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYADY--DEYSDQY----RWLKD----DLSKVDRKKTPW 281 (433)
Q Consensus 214 ~~~~~-~y~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~--~~~~~Q~----~WL~~----~L~~~~~~~~~~ 281 (433)
.... .+.+....|.. .. ..+. ...+ |+++|+.++....+ ...++|. .||.+ .+.+. ..+.
T Consensus 78 -~~l~~~~~~~~~~p~~-~~-lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~---~~~~ 149 (224)
T cd07388 78 -EYLREAYNAELVHPEI-RN-VHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL---KDYR 149 (224)
T ss_pred -HHHHHHhcccccCccc-ee-cCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC---CCCC
Confidence 0011 11100011210 00 0112 2344 55999999865433 2234542 56433 34333 2235
Q ss_pred EEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
.|+++|+||+..+..+ ...+.+..+++++++.+++|||.|
T Consensus 150 ~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 150 KVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred eEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 8999999999874322 345788999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-14 Score=126.31 Aligned_cols=145 Identities=21% Similarity=0.200 Sum_probs=88.8
Q ss_pred EEEEecCCCCCChHH-HH-HHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccccc
Q 013955 139 FAVAGDLGQTGWTKS-TL-DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (433)
Q Consensus 139 f~~~gD~~~~~~~~~-~l-~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~ 216 (433)
|+++||+|.+..... .+ +.+...++|+++++||+++.... ..+.. .........|++.++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~-~~~~~---~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDA-PRFAP---LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcch-HHHHH---HHHhhcCCccEEEeCCCcceE--------
Confidence 578999997643322 22 33457799999999999975443 22221 222233458999999999983
Q ss_pred ccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCC-ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC
Q 013955 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE-YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (433)
Q Consensus 217 ~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (433)
++|+...-..++.. ..++.+|+.++++ +.+||++|||+.....
T Consensus 69 -----------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~ 112 (166)
T cd07404 69 -----------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLSL 112 (166)
T ss_pred -----------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCcccc
Confidence 11111111111111 1344555555444 2389999999987643
Q ss_pred CCC---C-CChhHHHHHHHHHHHcCCcEEEecCcccceee
Q 013955 296 AHQ---G-EGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (433)
Q Consensus 296 ~~~---~-~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 331 (433)
... . .....++.+..++++.+|+++++||+|.....
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 113 APQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred CccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 221 1 11134566888888999999999999987433
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.4e-14 Score=136.88 Aligned_cols=92 Identities=18% Similarity=0.242 Sum_probs=65.6
Q ss_pred CceEEEE-eCeE--EEEEEcccCC-----------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCC-CCC
Q 013955 236 NLYYSFD-VAGA--HLIMLGSYAD-----------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH-QGE 300 (433)
Q Consensus 236 ~~~ys~~-~g~v--~fi~lds~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~~~ 300 (433)
..||+|+ .|++ ++|+||+... .....+|++||+++|+++.. +.+++|+++|+|+....... ...
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 9999998641 11358999999999998864 44678888888876522211 000
Q ss_pred ------------ChhHHHHHHHHHHHc-CCcEEEecCcccc
Q 013955 301 ------------GDGMMAIMEPLLYAA-SVDLVLAGHVHAY 328 (433)
Q Consensus 301 ------------~~~~~~~l~~l~~~~-~VdlvlsGH~H~y 328 (433)
+.....+|..+|++| +|.++||||.|..
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 011124899999999 6889999999964
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-12 Score=120.71 Aligned_cols=254 Identities=21% Similarity=0.273 Sum_probs=136.1
Q ss_pred CCCeEEEEEecCCCCCC--------------------hHHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------------TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL 192 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l 192 (433)
.++||++.++|+|.+.. ....+++ ++.++||||+++||+++.......-..+.+.++|.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~ 130 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPA 130 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhH
Confidence 67899999999986532 0123444 35899999999999999855433334455666665
Q ss_pred -hhCCCceeccCCCcCCCCCcccccccccccccccCCC--CCCCCCCceE-EEEeCe------------------EEEEE
Q 013955 193 -ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE--ESGSNSNLYY-SFDVAG------------------AHLIM 250 (433)
Q Consensus 193 -~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~--~~~~~~~~~y-s~~~g~------------------v~fi~ 250 (433)
...|||.+++||||-.+.-.. .....+.. .+|.. ...+.++.-| -..+|+ ..+++
T Consensus 131 I~~~IPwA~~lGNHDdes~ltr-~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~lyf 207 (379)
T KOG1432|consen 131 IDRKIPWAAVLGNHDDESDLTR-LQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLYF 207 (379)
T ss_pred hhcCCCeEEEecccccccccCH-HHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccCceeeEEE
Confidence 446999999999998643210 01111111 12211 0001111111 111111 23456
Q ss_pred EcccCC---------C-CCChHHHHHHHHHhhcc---ccCCCC-eEEEEeccccc--CCCCC---CCC---C---ChhHH
Q 013955 251 LGSYAD---------Y-DEYSDQYRWLKDDLSKV---DRKKTP-WLLVLLHVPWY--NSNEA---HQG---E---GDGMM 305 (433)
Q Consensus 251 lds~~~---------~-~~~~~Q~~WL~~~L~~~---~~~~~~-~~iv~~H~P~~--~~~~~---~~~---~---~~~~~ 305 (433)
||+..+ | .....|..||+..-.+- ..+-.| --+++.|.|+- ..-.. ..+ + .....
T Consensus 208 ld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~ 287 (379)
T KOG1432|consen 208 LDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHN 287 (379)
T ss_pred EecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccc
Confidence 665322 1 12478999999887331 111112 35889999972 11111 000 0 00122
Q ss_pred HHHHHHHH-HcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEE
Q 013955 306 AIMEPLLY-AASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKI 384 (433)
Q Consensus 306 ~~l~~l~~-~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v 384 (433)
..+...|. ..+|++|++||+|...-..+.. +.+++.=|+|+...+ +. .+.|. -+-.++++
T Consensus 288 sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k-------~~~wlCygGgaGygg----Yg--~~gw~------Rr~Rv~e~ 348 (379)
T KOG1432|consen 288 SGFLTTLVNRGNVKGVFCGHDHVNDFCGELK-------GELWLCYGGGAGYGG----YG--IGGWE------RRARVFEL 348 (379)
T ss_pred cHHHHHHHhccCcceEEeccccccceecccC-------CeEEEEecCCCccCC----cC--cCCcc------cceEEEEc
Confidence 45555555 7899999999999988776543 556776555433322 11 22331 12233444
Q ss_pred EcCceEEEEEEEeCCCCCeeeeEEE
Q 013955 385 VNSTHAFWSWHRNDDDEPVRSDQLW 409 (433)
Q Consensus 385 ~~~~~l~~~~~~~~~g~~~v~d~f~ 409 (433)
.....---.|++.+|+.-.++|.=-
T Consensus 349 d~~~~~IkTWKRl~d~~~~~~D~q~ 373 (379)
T KOG1432|consen 349 DLNKDRIKTWKRLDDKPLSVIDYQL 373 (379)
T ss_pred cccccccceeeecCCCCcceeeeEE
Confidence 3221122357888777655667633
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.4e-14 Score=127.98 Aligned_cols=186 Identities=17% Similarity=0.141 Sum_probs=105.4
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhh-hCCCce
Q 013955 138 TFAVAGDLGQTGWT----------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLA-SARPWM 199 (433)
Q Consensus 138 ~f~~~gD~~~~~~~----------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~-~~iP~~ 199 (433)
||++++|+|.+... +++++.+.+.+||+||++||+++.... ...+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999876431 234445557899999999999986542 234555666666664 369999
Q ss_pred eccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCC
Q 013955 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKT 279 (433)
Q Consensus 200 ~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 279 (433)
+++||||.............+.. +................+...++.|++++..... ....+.++++..+..... .
T Consensus 81 ~~~GNHD~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~--~ 156 (223)
T cd00840 81 IIAGNHDSPSRLGALSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPLDP--D 156 (223)
T ss_pred EecCCCCCccccccccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhccCC--C
Confidence 99999999643211000000000 0000000000011222334556888888754221 113344444555544432 3
Q ss_pred CeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceee
Q 013955 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (433)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 331 (433)
...|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 157 ~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 157 DFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred CcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 468999999976544321110 123344466778999999999987543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-13 Score=98.80 Aligned_cols=62 Identities=37% Similarity=0.805 Sum_probs=41.0
Q ss_pred CccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEE
Q 013955 342 CGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQL 408 (433)
Q Consensus 342 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f 408 (433)
++|+||++|+||+. + ..+..++|+|++++..+|||++|++.|+|+|.|||++++||+ |+|+|
T Consensus 1 kapVhiv~G~aG~~--l-~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNG--L-DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCC--c-ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 37999999999994 3 357778899999999999999999999999999999988776 99998
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.2e-12 Score=104.77 Aligned_cols=116 Identities=29% Similarity=0.283 Sum_probs=83.5
Q ss_pred EEEecCCCCCChHHHH---HHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccccc
Q 013955 140 AVAGDLGQTGWTKSTL---DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (433)
Q Consensus 140 ~~~gD~~~~~~~~~~l---~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~ 216 (433)
+++||+|......... ....+.++|++|++||+++...... +..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GNHD---------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGNHD---------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCCce----------
Confidence 4789998775543332 3556889999999999998766532 2222222223334599999999999
Q ss_pred ccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCC
Q 013955 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296 (433)
Q Consensus 217 ~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 296 (433)
|+++|.|++.....
T Consensus 70 ------------------------------------------------------------------i~~~H~~~~~~~~~ 83 (131)
T cd00838 70 ------------------------------------------------------------------ILLTHGPPYDPLDE 83 (131)
T ss_pred ------------------------------------------------------------------EEEeccCCCCCchh
Confidence 89999998776543
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
........+..+..++.+.+++++|+||.|.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 84 LSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 221111246888999999999999999999998775
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.6e-12 Score=105.75 Aligned_cols=134 Identities=17% Similarity=0.162 Sum_probs=84.0
Q ss_pred EEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccc
Q 013955 138 TFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (433)
Q Consensus 138 ~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~ 217 (433)
||+++||+|.... .+...++|+++++||+++.... ..++.+.+.++.+. ..+++.++||||... .
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~~-~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~------~- 65 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGTL-EELQKFLDWLKSLP-HPHKIVIAGNHDLTL------D- 65 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhCC-CCeEEEEECCCCCcC------C-
Confidence 5899999986543 3345789999999999875443 33444444444432 123578999999721 0
Q ss_pred cccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCC
Q 013955 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (433)
Q Consensus 218 ~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (433)
. . ...|++.|.|++......
T Consensus 66 --------------------------------------------------------~---~-~~~ilv~H~~p~~~~~~~ 85 (135)
T cd07379 66 --------------------------------------------------------P---E-DTDILVTHGPPYGHLDLV 85 (135)
T ss_pred --------------------------------------------------------C---C-CCEEEEECCCCCcCcccc
Confidence 1 1 137889999987754322
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEE
Q 013955 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI 349 (433)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~ 349 (433)
........+.+.+++++.+++++|+||+|........- ...+++.+|.+
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~---~~~~~t~~in~ 134 (135)
T cd07379 86 SSGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVL---DTDGETLFVNA 134 (135)
T ss_pred ccCcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEec---ccCCCEEEEeC
Confidence 11111233677788899999999999999864221000 01357777754
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.5e-11 Score=114.00 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=59.7
Q ss_pred CCCeEEEEEecCCCCCCh---HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 134 QFPITFAVAGDLGQTGWT---KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
..+++++.++|.|..... .+.+..+.+..||+|+++||+++... ...+..+.+.++++.+..+++++.||||+..
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~-~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR-PPGVAALALFLAKLKAPLGVFAVLGNHDYGV 119 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC-CCCHHHHHHHHHhhhccCCEEEEeccccccc
Confidence 578999999999987655 34555666888899999999998522 2355666778888888899999999999964
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-10 Score=105.99 Aligned_cols=64 Identities=20% Similarity=0.276 Sum_probs=44.6
Q ss_pred eEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 137 ITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
+|++++||+|... .....+.+...+||+||++||+++.. ..+.+.+..+ ..|++.++||||...
T Consensus 1 ~rIa~isDiHg~~-~~~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQW-DLEDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCc-hHHHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 5899999999653 33334566778999999999998532 1122222222 379999999999854
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.7e-11 Score=105.00 Aligned_cols=138 Identities=25% Similarity=0.284 Sum_probs=81.9
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccc
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~ 215 (433)
+||+++||+|.+.. ..++++.+ .+||+|+++||+++. ..+.+.++.+ |++.+.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~GNHD~~~------ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVRGNHDNWA------ 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE--CCHSTH------
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEeCCccccc------
Confidence 68999999997633 23556666 479999999999862 2233333332 9999999999631
Q ss_pred cccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC
Q 013955 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (433)
Q Consensus 216 ~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (433)
+...... .. +. ......-....|++.|.+.+....
T Consensus 62 ----~~~~~~~----------~~----------------------------~~---~~~~~~~~~~~i~~~H~~~~~~~~ 96 (156)
T PF12850_consen 62 ----FPNENDE----------EY----------------------------LL---DALRLTIDGFKILLSHGHPYDVQW 96 (156)
T ss_dssp ----HHSEECT----------CS----------------------------SH---SEEEEEETTEEEEEESSTSSSSTT
T ss_pred ----chhhhhc----------cc----------------------------cc---cceeeeecCCeEEEECCCCccccc
Confidence 1110000 00 00 010000113578888887665321
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCC
Q 013955 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGN 354 (433)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 354 (433)
..+.+..++...+++++++||.|..+... .+++.++..|+-+.
T Consensus 97 --------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 97 --------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIGG 139 (156)
T ss_dssp --------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSSS
T ss_pred --------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCCC
Confidence 22456678889999999999999977655 24788888887654
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.5e-09 Score=93.25 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=97.4
Q ss_pred EEEEEecCCCCCCh---H-HHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 138 TFAVAGDLGQTGWT---K-STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 138 ~f~~~gD~~~~~~~---~-~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
+++++||+|.+... . .+++.++..++|.|+++||++.. ..++ .++.+ ..|++.|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~----~~~~----~l~~~--~~~~~~V~GN~D~~~---- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK----ETYD----YLKTI--APDVHIVRGDFDENL---- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH----HHHH----HHHhh--CCceEEEECCCCccc----
Confidence 47899999954332 2 33444445789999999999751 2222 22222 247899999999731
Q ss_pred cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCC
Q 013955 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (433)
Q Consensus 214 ~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (433)
.+|. ...+++++ ++|.+.|--.+..
T Consensus 67 -----------~lp~---------~~~~~~~g-----------------------------------~~i~l~HG~~~~~ 91 (178)
T cd07394 67 -----------NYPE---------TKVITVGQ-----------------------------------FKIGLIHGHQVVP 91 (178)
T ss_pred -----------cCCC---------cEEEEECC-----------------------------------EEEEEEECCcCCC
Confidence 2232 11233333 2455555322211
Q ss_pred CCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeE
Q 013955 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFR 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 373 (433)
.. ..+.+..++++.++|++++||+|...... .+|+.+++.|+.|.+.+- .+.
T Consensus 92 ~~--------~~~~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~~~~~----~~~-------- 143 (178)
T cd07394 92 WG--------DPDSLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATGAFSP----LDP-------- 143 (178)
T ss_pred CC--------CHHHHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCCCCCC----CCC--------
Confidence 10 11345556677889999999999765433 247888989987643210 001
Q ss_pred eccccEEEEEEEcCceEEEEEEEeCCCC
Q 013955 374 EASFGHGELKIVNSTHAFWSWHRNDDDE 401 (433)
Q Consensus 374 ~~~~G~~~l~v~~~~~l~~~~~~~~~g~ 401 (433)
.....|+++++.+ ..+.+++++..+++
T Consensus 144 ~~~~syail~~~~-~~~~~~~~~l~~~~ 170 (178)
T cd07394 144 NVIPSFVLMDIQG-SKVVTYVYQLIDGE 170 (178)
T ss_pred CCCCeEEEEEecC-CeEEEEEEEEECCc
Confidence 0123678888744 45788888875554
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=103.16 Aligned_cols=109 Identities=15% Similarity=0.267 Sum_probs=70.4
Q ss_pred hhcCCCceEEccccccccccch--hhHHHhhhhhhhh---hhCCCceeccCCCcCCCCCcccccccccccccccCCCCCC
Q 013955 158 IGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPL---ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESG 232 (433)
Q Consensus 158 i~~~~pd~vl~~GD~~~~~~~~--~~w~~~~~~~~~l---~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~ 232 (433)
+...+||+|+++||+++.+... .+|....+-+.++ ...+|++.++||||.++.... ....-.++|.
T Consensus 38 ~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~--~~~~~v~RF~------- 108 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED--PIESKIRRFE------- 108 (195)
T ss_pred HhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC--cCHHHHHHHH-------
Confidence 3467999999999999987642 2343322222222 234899999999999642110 0011112221
Q ss_pred CCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHH
Q 013955 233 SNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLL 312 (433)
Q Consensus 233 ~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~ 312 (433)
.+| |+++|.|+..... ..+..++
T Consensus 109 ----~~F-------------------------------------------i~lsH~P~~~~~~----------~~~~~~~ 131 (195)
T cd08166 109 ----KYF-------------------------------------------IMLSHVPLLAEGG----------QALKHVV 131 (195)
T ss_pred ----Hhh-------------------------------------------eeeeccccccccc----------HHHHHHH
Confidence 111 8999999865432 2667888
Q ss_pred HHcCCcEEEecCcccceeee
Q 013955 313 YAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 313 ~~~~VdlvlsGH~H~y~r~~ 332 (433)
.++.++++|+||.|.+....
T Consensus 132 ~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 132 TDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HhcCceEEEEcCccceeeEE
Confidence 99999999999999976543
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.3e-10 Score=98.33 Aligned_cols=132 Identities=20% Similarity=0.213 Sum_probs=80.9
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccccc
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~ 216 (433)
|++++||+|.... .+++++.+.+ +|.|+++||+++...... +....|++.|+||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~GNhD~~~~------ 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRGNCDGEVD------ 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEeCCCCCcCC------
Confidence 5899999996531 2233444333 999999999987543211 2334789999999998421
Q ss_pred ccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCC
Q 013955 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296 (433)
Q Consensus 217 ~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 296 (433)
. ..+|. ...++++ ..+|++.|.+.......
T Consensus 62 ----~--~~~p~---------~~~~~~~-----------------------------------g~~i~v~Hg~~~~~~~~ 91 (155)
T cd00841 62 ----F--PILPE---------EAVLEIG-----------------------------------GKRIFLTHGHLYGVKNG 91 (155)
T ss_pred ----c--ccCCc---------eEEEEEC-----------------------------------CEEEEEECCcccccccc
Confidence 0 01121 1111111 13678888776543211
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
. .. ..++.+.++|++++||+|...... .+++.++..|+.|.+
T Consensus 92 -------~-~~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~ 133 (155)
T cd00841 92 -------L-DR-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSLP 133 (155)
T ss_pred -------h-hh-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccCc
Confidence 0 11 455677889999999999865432 247888888887653
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-10 Score=105.27 Aligned_cols=174 Identities=16% Similarity=0.112 Sum_probs=91.9
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh--cCCCceEEccccccccc---c-chhhHHHhhhhhhhhhhC-CCceeccCCC
Q 013955 137 ITFAVAGDLGQTGWTK----STLDHIG--QCKYDVHLLPGDLSYAD---Y-MQHRWDTFGELVQPLASA-RPWMVTQGNH 205 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~l~~i~--~~~pd~vl~~GD~~~~~---~-~~~~w~~~~~~~~~l~~~-iP~~~v~GNH 205 (433)
+++++++|+|.+.... ..++.+. ..+||+|+++||+++.- . .........+.++.+... +|++.++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 4789999999765432 2344442 46899999999999631 1 112223445556666554 8999999999
Q ss_pred cCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEE
Q 013955 206 EKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (433)
Q Consensus 206 D~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (433)
|..... .+.+...... -+....+++++.++++.-.... ......++++.+.+... |...+
T Consensus 81 D~~~~~-------~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~r~~------~~~~~ 140 (241)
T PRK05340 81 DFLLGK-------RFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKVRNP------WLQWL 140 (241)
T ss_pred chhhhH-------HHHHhCCCEE------eCCcEEEEECCEEEEEECCccc-ccCCHHHHHHHHHHhCH------HHHHH
Confidence 974211 1111111000 0123346677777776643221 11223334443333321 11111
Q ss_pred ecccccCCC---------------C-CCCCCChhHHHHHHHHHHHcCCcEEEecCccccee
Q 013955 286 LHVPWYNSN---------------E-AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (433)
Q Consensus 286 ~H~P~~~~~---------------~-~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 330 (433)
.|.+++... . ..........+.+.+++++++++++++||+|....
T Consensus 141 ~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 141 FLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 122211000 0 00000011235678889999999999999998654
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.8e-10 Score=97.88 Aligned_cols=176 Identities=17% Similarity=0.192 Sum_probs=106.8
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEcccccc--ccccchhhHHHhhhhhhhhh-hCCCceeccCCCcCCCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLS--YADYMQHRWDTFGELVQPLA-SARPWMVTQGNHEKESI 210 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~--~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNHD~~~~ 210 (433)
..+|+++++|.|.... .++.+..++..++|+++++||++ +-+.....-... .++.+. ..+|+++++||-|-...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~--~~e~l~~~~~~v~avpGNcD~~~v 79 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELN--KLEALKELGIPVLAVPGNCDPPEV 79 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhh--HHHHHHhcCCeEEEEcCCCChHHH
Confidence 4689999999987654 35566666678999999999999 433321111110 034444 35999999999886321
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEccc--CCC----CCC-hHHHHHHHHHhhccccCCCCeEE
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY--ADY----DEY-SDQYRWLKDDLSKVDRKKTPWLL 283 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~--~~~----~~~-~~Q~~WL~~~L~~~~~~~~~~~i 283 (433)
.. -... ....- . + -..+++++.|+.+--. ..+ ... .+-+.-|++-++.... +-.|
T Consensus 80 ~~---~l~~----~~~~v-----~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~---~~~I 141 (226)
T COG2129 80 ID---VLKN----AGVNV-----H-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN---PVNI 141 (226)
T ss_pred HH---HHHh----ccccc-----c-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC---cceE
Confidence 11 0000 10000 0 1 3466777777774321 111 112 2333445555555432 1139
Q ss_pred EEecccccCCCCCCCCC-ChhHHHHHHHHHHHcCCcEEEecCccccee
Q 013955 284 VLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (433)
Q Consensus 284 v~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 330 (433)
++.|.||+......... .....+.+.+++++.++.+.+|||.|.+.-
T Consensus 142 l~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 142 LLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred EEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 99999999876652111 234668999999999999999999998543
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-10 Score=101.78 Aligned_cols=178 Identities=18% Similarity=0.189 Sum_probs=91.7
Q ss_pred CeEEEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHH--------------------------Hhhhh
Q 013955 136 PITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWD--------------------------TFGEL 188 (433)
Q Consensus 136 ~~~f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~--------------------------~~~~~ 188 (433)
+-++++++|.+... ...++++.+...+||+++++||+.-......+|. .|++.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 35789999985432 2345666677889999999999987666556666 45555
Q ss_pred hhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC-CC------C--
Q 013955 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD-YD------E-- 259 (433)
Q Consensus 189 ~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~-~~------~-- 259 (433)
+..+ .+|++++|||||........+ +|....-.|.- ..-...+.+--|.+.|+.+..... .. .
T Consensus 85 L~~~--~~p~~~vPG~~Dap~~~~lr~---a~~~e~v~p~~---~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrY 156 (255)
T PF14582_consen 85 LGEL--GVPVFVVPGNMDAPERFFLRE---AYNAEIVTPHI---HNVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRY 156 (255)
T ss_dssp HHCC---SEEEEE--TTS-SHHHHHHH---HHHCCCC-TTE---EE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EE
T ss_pred HHhc--CCcEEEecCCCCchHHHHHHH---Hhccceeccce---eeeeeeecccCCcEEEEecCccccCCCccccccccc
Confidence 5444 399999999999842111000 11111111110 000112223334467776654311 00 0
Q ss_pred ChHHHHHHHHHhhccccCCCCeEEEEecccc-cCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW-YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 260 ~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.....+|..+.|.+.+. .-+|++.|.|+ +..+..+ ...+.+.+++++++++++||||.|.-.
T Consensus 157 P~weaey~lk~l~elk~---~r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 157 PAWEAEYSLKFLRELKD---YRKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp EHHHHHHHHGGGGGCTS---SEEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred hHHHHHHHHHHHHhccc---ccEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEecccccch
Confidence 12345666677777632 23788899998 3322222 234789999999999999999999754
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=107.98 Aligned_cols=172 Identities=22% Similarity=0.310 Sum_probs=103.5
Q ss_pred HHHHHHhh--cCCCceEEccccccccccc----hhhH---HHhhhhhhhhhhCCCceeccCCCcCCCCCcc-----ccc-
Q 013955 152 KSTLDHIG--QCKYDVHLLPGDLSYADYM----QHRW---DTFGELVQPLASARPWMVTQGNHEKESIPLI-----MDA- 216 (433)
Q Consensus 152 ~~~l~~i~--~~~pd~vl~~GD~~~~~~~----~~~w---~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~-----~~~- 216 (433)
..++++|+ ..++|+|+++||++-.... +... ....+.+.+....+|+++++||||....... ...
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 45677776 3349999999999865522 1111 1233445555668999999999998532110 000
Q ss_pred -----cccccccc--ccCCCC-CCCCCCceEEE-EeCeEEEEEEcccCCC----------CCChHHHHHHHHHhhccccC
Q 013955 217 -----FQSYNARW--KMPFEE-SGSNSNLYYSF-DVAGAHLIMLGSYADY----------DEYSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 217 -----~~~y~~~~--~~p~~~-~~~~~~~~ys~-~~g~v~fi~lds~~~~----------~~~~~Q~~WL~~~L~~~~~~ 277 (433)
+..+...| -+|.+. .....+.+|.. ..+|.++|+||+..-+ .....|++|+..+|.+++.+
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 01111112 134321 11223556654 4689999999995321 12478899999999998765
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcC--CcEEEecCcccce
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAYE 329 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y~ 329 (433)
+. -|=+++|.|+-.. ....+ ....+-.++.++. +...|.||.|.-+
T Consensus 358 Ge-kVhil~HIPpG~~-~c~~~----ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 358 GE-KVHILGHIPPGDG-VCLEG----WSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CC-EEEEEEeeCCCCc-chhhh----hhHHHHHHHHHHHHhhhhhccccCccee
Confidence 44 3889999997431 11111 2244555566653 5578999999865
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.03 E-value=2e-09 Score=93.38 Aligned_cols=51 Identities=24% Similarity=0.350 Sum_probs=35.0
Q ss_pred hhcCCCceEEccccccccccc--hhhHHHhhhhhhhhh---hCCCceeccCCCcCC
Q 013955 158 IGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLA---SARPWMVTQGNHEKE 208 (433)
Q Consensus 158 i~~~~pd~vl~~GD~~~~~~~--~~~w~~~~~~~~~l~---~~iP~~~v~GNHD~~ 208 (433)
+...+||+|+++||+++.... ...|..+...+..+. ..+|++.++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 347899999999999976432 234544333333332 248999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-09 Score=96.70 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=46.5
Q ss_pred EEEecCCCCCCh----HHHHHHhhc--CCCceEEccccccccc----cchhhHHHhhhhhhhhhh-CCCceeccCCCcCC
Q 013955 140 AVAGDLGQTGWT----KSTLDHIGQ--CKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKE 208 (433)
Q Consensus 140 ~~~gD~~~~~~~----~~~l~~i~~--~~pd~vl~~GD~~~~~----~~~~~w~~~~~~~~~l~~-~iP~~~v~GNHD~~ 208 (433)
++++|+|.+... +..++.+.+ .+||+|+++||+++.. ......+.+.+.++.+.. .+|++.++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 689999976532 344555543 3899999999999731 111222344455666654 48999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-09 Score=91.50 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=41.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 137 ITFAVAGDLGQTGWT-KSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
+|++++||+|..... +..++.+... ++|.|+++||++.. .. .+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~----~~----~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTSP----FV----LKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCCH----HH----HHHHHHh--CCceEEEccCCCc
Confidence 589999999965432 3344555555 89999999999721 11 1222222 3589999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.7e-09 Score=95.73 Aligned_cols=156 Identities=20% Similarity=0.153 Sum_probs=96.3
Q ss_pred EEEEEecCCCCCChHHHHHHhh----cCCCceEEccccccccccch---------------------h----hHHHhh--
Q 013955 138 TFAVAGDLGQTGWTKSTLDHIG----QCKYDVHLLPGDLSYADYMQ---------------------H----RWDTFG-- 186 (433)
Q Consensus 138 ~f~~~gD~~~~~~~~~~l~~i~----~~~pd~vl~~GD~~~~~~~~---------------------~----~w~~~~-- 186 (433)
||++.++.+...........+. +.+||++|++||.+|.+... . .+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5777888765544444555554 88999999999999987520 1 111111
Q ss_pred hhhhhhhhCCCceeccCCCcCCCCCccc---------------ccccccccccccCCCCCC--CCCCceEEEEeCeE-EE
Q 013955 187 ELVQPLASARPWMVTQGNHEKESIPLIM---------------DAFQSYNARWKMPFEESG--SNSNLYYSFDVAGA-HL 248 (433)
Q Consensus 187 ~~~~~l~~~iP~~~v~GNHD~~~~~~~~---------------~~~~~y~~~~~~p~~~~~--~~~~~~ys~~~g~v-~f 248 (433)
..++.+.+.+|++.++.+||+..+.... .....|...+..+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 2345566779999999999996432210 111233333322221111 23578999999996 99
Q ss_pred EEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCC--cEEEecCcc
Q 013955 249 IMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASV--DLVLAGHVH 326 (433)
Q Consensus 249 i~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~V--dlvlsGH~H 326 (433)
++||+.... +.+ ..-...++.+..++.+.++ -++|||+.|
T Consensus 161 ~~lD~R~~R-------------------------------------d~W-~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR-------------------------------------DSW-DGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc-------------------------------------ccc-cccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999997653 111 1123467777777655532 289999999
Q ss_pred cceee
Q 013955 327 AYERS 331 (433)
Q Consensus 327 ~y~r~ 331 (433)
.....
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 76544
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.6e-09 Score=94.09 Aligned_cols=50 Identities=24% Similarity=0.380 Sum_probs=35.6
Q ss_pred hcCCCceEEccccccccccch--hhHHHhhhhhhhhh-------hCCCceeccCCCcCC
Q 013955 159 GQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLA-------SARPWMVTQGNHEKE 208 (433)
Q Consensus 159 ~~~~pd~vl~~GD~~~~~~~~--~~w~~~~~~~~~l~-------~~iP~~~v~GNHD~~ 208 (433)
...+||+||++||+++..... ..|....+.+..+. ..+|++.++||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 478999999999999875532 34554433333332 158999999999995
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.1e-09 Score=87.42 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=68.6
Q ss_pred EEEecCCCCCChHHHHHHhh--cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccc
Q 013955 140 AVAGDLGQTGWTKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (433)
Q Consensus 140 ~~~gD~~~~~~~~~~l~~i~--~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~ 217 (433)
+++||+|.. ...++.+. ..++|+++++||+.. ..++ .+..+ ...|++.+.||||
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~-----~~~~----~~~~~-~~~~~~~V~GN~D----------- 56 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK-----EYLE----YLVTM-LNVPVYYVHGNHD----------- 56 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh-----HHHH----HHHHH-cCCCEEEEeCCCc-----------
Confidence 478999833 22333332 588999999999842 1122 22222 2468999999999
Q ss_pred cccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCC
Q 013955 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (433)
Q Consensus 218 ~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (433)
.+|+++|+|++......
T Consensus 57 ---------------------------------------------------------------~~Ilv~H~pp~~~~~~~ 73 (129)
T cd07403 57 ---------------------------------------------------------------VDILLTHAPPAGIGDGE 73 (129)
T ss_pred ---------------------------------------------------------------cCEEEECCCCCcCcCcc
Confidence 25788888876543211
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEecCcccceee
Q 013955 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (433)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 331 (433)
. ......+.+.+++.+++++++|+||+|.....
T Consensus 74 ~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 74 D-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred c-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 1 11123567888889999999999999976543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.8e-08 Score=87.84 Aligned_cols=71 Identities=20% Similarity=0.198 Sum_probs=45.5
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHH---hhhhhhhhhh-CCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT---FGELVQPLAS-ARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~---~~~~~~~l~~-~iP~~~v~GNHD~~ 208 (433)
+|++++||+|.+.. .+++++.+.+.++|.++++||+++.+.. ..|.. ..+.++.+.. ..+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~-~~~~~~~~~~~~~~~l~~~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPR-NPLPEGYAPKKVAELLNAYADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcC-CCCccccCHHHHHHHHHhcCCceEEEccCCcch
Confidence 58999999995432 2345566667899999999999864331 11110 1122232322 26899999999973
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-07 Score=94.60 Aligned_cols=44 Identities=23% Similarity=0.090 Sum_probs=33.5
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccc
Q 013955 135 FPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM 178 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~ 178 (433)
+.+||++++|+|.+... .++++.+.+.++|+||++||+.+...+
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~P 58 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKP 58 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCC
Confidence 56899999999976321 234445568899999999999987654
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=93.85 Aligned_cols=175 Identities=15% Similarity=0.103 Sum_probs=90.2
Q ss_pred eEEEEEecCCCCC-------C---hHHHHHHhhcCCCc-eEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCC
Q 013955 137 ITFAVAGDLGQTG-------W---TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (433)
Q Consensus 137 ~~f~~~gD~~~~~-------~---~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNH 205 (433)
++|+.++|+|... . ....++++++.+|| +++.+||++....... +......++.+...-.-+.++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCEEeeccc
Confidence 5799999998432 1 13566677777888 7799999987655321 211122222232223456788999
Q ss_pred cCCCCCcccccccccccccccCC---C----C--C-CCCCCceEEEEeCeEE--EEEEcccCCCC----------CChHH
Q 013955 206 EKESIPLIMDAFQSYNARWKMPF---E----E--S-GSNSNLYYSFDVAGAH--LIMLGSYADYD----------EYSDQ 263 (433)
Q Consensus 206 D~~~~~~~~~~~~~y~~~~~~p~---~----~--~-~~~~~~~ys~~~g~v~--fi~lds~~~~~----------~~~~Q 263 (433)
|+..... .+.........|. + . . ......|-.++.++++ |+.+.+..... .....
T Consensus 80 e~d~g~~---~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T cd00845 80 EFDYGLD---ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFEDL 156 (252)
T ss_pred cccccHH---HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecCH
Confidence 9853221 1111111111110 0 0 0 0111335566778755 45444321100 00122
Q ss_pred HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCccccee
Q 013955 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (433)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 330 (433)
.+.+++..++.. .+.+.+|++.|.|... ...+.+.+ .++|++|+||.|....
T Consensus 157 ~~~~~~~~~~~~-~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 157 AEAVAVAEELLA-EGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred HHHHHHHHHHHh-CCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 333433222222 2567899999987532 11222222 5899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-07 Score=90.98 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=47.6
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEcccccccccc-ch-hhHHHhhh-hhhhhhh-CCCce
Q 013955 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADY-MQ-HRWDTFGE-LVQPLAS-ARPWM 199 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~-~~-~~w~~~~~-~~~~l~~-~iP~~ 199 (433)
+||+.+||+|.+... +++++.+.+.+||+||++||+++... .. .......+ +++.+.. .+|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 589999999976431 12334445889999999999997642 21 12222222 2334433 59999
Q ss_pred eccCCCcCC
Q 013955 200 VTQGNHEKE 208 (433)
Q Consensus 200 ~v~GNHD~~ 208 (433)
.++||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999984
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=89.81 Aligned_cols=175 Identities=19% Similarity=0.201 Sum_probs=88.5
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHhhcCCCc-eEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCC
Q 013955 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGN 204 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GN 204 (433)
++++.+.|+|.-.. ....++++++.+|+ +++.+||++..... ..+..-...++.+..--.-+.++||
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l~~d~~~~GN 79 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNALGVDLACFGN 79 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhcCCcEEeecc
Confidence 46788888863111 13455666667788 99999999865432 1121111122222221233668999
Q ss_pred CcCCCCCcccccccccccccccCC---C----CC-C--CCCCceEEEEeCeEE--EEEEcccCCC------CC---ChHH
Q 013955 205 HEKESIPLIMDAFQSYNARWKMPF---E----ES-G--SNSNLYYSFDVAGAH--LIMLGSYADY------DE---YSDQ 263 (433)
Q Consensus 205 HD~~~~~~~~~~~~~y~~~~~~p~---~----~~-~--~~~~~~ys~~~g~v~--fi~lds~~~~------~~---~~~Q 263 (433)
||+..... .+....+....|. | .. . ..-..|..++.++++ |+.+.+.... .. ...-
T Consensus 80 Hefd~g~~---~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~d~ 156 (257)
T cd07406 80 HEFDFGED---QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYRDY 156 (257)
T ss_pred cccccCHH---HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEcCH
Confidence 99953221 1111111111110 0 00 0 012456778888865 4555442111 00 1122
Q ss_pred HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.+.+++.+++..+.+++.+|++.|.+... . ..+.+.+ .++|++|+||.|...
T Consensus 157 ~~~~~~~v~~~~~~~~D~iVvl~H~g~~~-----------d-~~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 157 VETARELVDELREQGADLIIALTHMRLPN-----------D-KRLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeccCchh-----------h-HHHHHhC--CCCceEEecccceeE
Confidence 33344444333333677899999997421 0 1222222 479999999999865
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-07 Score=90.44 Aligned_cols=179 Identities=15% Similarity=0.097 Sum_probs=91.8
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHhhcCCCceEEc-cccccccccchhhHH---------Hhhhhh
Q 013955 137 ITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWD---------TFGELV 189 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-----------------~~~~l~~i~~~~pd~vl~-~GD~~~~~~~~~~w~---------~~~~~~ 189 (433)
++|+.++|+|..-. ....++++++.+|+.+++ +||++..... ..+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 47888888874310 134556666678888777 9999875532 1121 122222
Q ss_pred hhhhhCCCceeccCCCcCCCCCcccccccccccccccCC---C----C-CCCCCCceEEEEeC-eEEEEEEcccCCC---
Q 013955 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----E-SGSNSNLYYSFDVA-GAHLIMLGSYADY--- 257 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~-~~~~~~~~ys~~~g-~v~fi~lds~~~~--- 257 (433)
..+ -+-+.++||||+..... .+....+....|. | . .......|.-++.+ ++++-++.-....
T Consensus 80 n~~---g~d~~~lGNHe~d~g~~---~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~ 153 (277)
T cd07410 80 NAL---GYDAGTLGNHEFNYGLD---YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPN 153 (277)
T ss_pred Hhc---CCCEEeecccCcccCHH---HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccccc
Confidence 222 23466789999853211 1111111111111 0 0 01112445567888 8665554421110
Q ss_pred ------------CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecC
Q 013955 258 ------------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGH 324 (433)
Q Consensus 258 ------------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH 324 (433)
....+..++..+.|++ .+++.+|+++|.+........ .. .......|.++ .++|++|+||
T Consensus 154 ~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~---~~~~~~~la~~~~~vD~IlgGH 226 (277)
T cd07410 154 WEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LT---GENAAYELAEEVPGIDAILTGH 226 (277)
T ss_pred ccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cC---CccHHHHHHhcCCCCcEEEeCC
Confidence 0112234444445544 256789999999865432100 01 11122334444 4899999999
Q ss_pred cccce
Q 013955 325 VHAYE 329 (433)
Q Consensus 325 ~H~y~ 329 (433)
.|...
T Consensus 227 sH~~~ 231 (277)
T cd07410 227 QHRRF 231 (277)
T ss_pred Ccccc
Confidence 99754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=79.87 Aligned_cols=165 Identities=19% Similarity=0.265 Sum_probs=86.8
Q ss_pred CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEE
Q 013955 161 CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240 (433)
Q Consensus 161 ~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys 240 (433)
..-|.|++.||+......++.-.. ++++..+. .+ -+.+.||||+... .. ....+ .+|.. .. -..-.
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~D-l~~i~~LP-G~-K~m~rGNHDYWw~-s~----skl~n--~lp~~-l~---~~n~~ 107 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEED-LRFIGDLP-GT-KYMIRGNHDYWWS-SI----SKLNN--ALPPI-LF---YLNNG 107 (230)
T ss_pred ChhhEEEecccchhheechhhhhh-hhhhhcCC-Cc-EEEEecCCccccc-hH----HHHHh--hcCch-Hh---hhccc
Confidence 345799999999887655332222 23344332 12 3568999999642 11 11111 11210 00 00011
Q ss_pred EEeCeEEEEEEccc----CCCCCChHH--------HHHHHH-HhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHH
Q 013955 241 FDVAGAHLIMLGSY----ADYDEYSDQ--------YRWLKD-DLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAI 307 (433)
Q Consensus 241 ~~~g~v~fi~lds~----~~~~~~~~Q--------~~WL~~-~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~ 307 (433)
|.++++.++..-.. .++.+..+| ..-|+. ..++.++ ...-.|||.|+|+++..... ..
T Consensus 108 f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k-~~~~fivM~HYPP~s~~~t~--------~~ 178 (230)
T COG1768 108 FELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPK-GVSKFIVMTHYPPFSDDGTP--------GP 178 (230)
T ss_pred eeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhccc-CcCeEEEEEecCCCCCCCCC--------cc
Confidence 44455444433221 112222222 223333 2233333 44458999999998764321 35
Q ss_pred HHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 308 MEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 308 l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
+.+++++++|+.++.||.|.-.|-.+-. .+-.|+-|+.+.+
T Consensus 179 ~sevlee~rv~~~lyGHlHgv~~p~~~~---s~v~Gi~y~Lvaa 219 (230)
T COG1768 179 FSEVLEEGRVSKCLYGHLHGVPRPNIGF---SNVRGIEYMLVAA 219 (230)
T ss_pred hHHHHhhcceeeEEeeeccCCCCCCCCc---ccccCceEEEEec
Confidence 7778889999999999999887644311 1234777766543
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-08 Score=90.82 Aligned_cols=188 Identities=16% Similarity=0.136 Sum_probs=94.9
Q ss_pred EEEecCCCCCChH---HHHHHhh----cCCCceEEccccccccccc--h---hhHHH-hhhhhhhhhhCCCceeccCCCc
Q 013955 140 AVAGDLGQTGWTK---STLDHIG----QCKYDVHLLPGDLSYADYM--Q---HRWDT-FGELVQPLASARPWMVTQGNHE 206 (433)
Q Consensus 140 ~~~gD~~~~~~~~---~~l~~i~----~~~pd~vl~~GD~~~~~~~--~---~~w~~-~~~~~~~l~~~iP~~~v~GNHD 206 (433)
++++|+|.+.... .....+. ..++|.++++||+++.-.. . ..... +...++.....++++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999765432 2222222 2599999999999964211 1 11111 1333444455699999999999
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEe
Q 013955 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (433)
Q Consensus 207 ~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (433)
..... .. ........ .......+.+++.+++++-... +........|+...+..... .+.++..
T Consensus 81 ~~~~~-----~~--~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~---~~~~~~~ 144 (217)
T cd07398 81 FLLGD-----FF--AEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYD---QLLFLNR 144 (217)
T ss_pred HHHHh-----HH--HHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHH---HHHHhcc
Confidence 85311 11 00000000 0011115677888888876532 22234444444443221100 0000000
Q ss_pred ccc---------ccCC----CCCC--CCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 287 HVP---------WYNS----NEAH--QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 287 H~P---------~~~~----~~~~--~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
+.. ...+ .... ........+.+..++++++++++++||+|....... +++.|+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~--------~~~~~~n~G~ 216 (217)
T cd07398 145 PLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHEL--------DGKLYINLGD 216 (217)
T ss_pred hHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEEE--------CCEEEEECCC
Confidence 000 0000 0000 001113446667778889999999999998765441 3677888775
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.4e-08 Score=85.51 Aligned_cols=56 Identities=16% Similarity=0.256 Sum_probs=34.5
Q ss_pred HHHHhh-cCCCceEEccccccccccc-hhhHHHh-hhhhhhhh-------------------hCCCceeccCCCcCCC
Q 013955 154 TLDHIG-QCKYDVHLLPGDLSYADYM-QHRWDTF-GELVQPLA-------------------SARPWMVTQGNHEKES 209 (433)
Q Consensus 154 ~l~~i~-~~~pd~vl~~GD~~~~~~~-~~~w~~~-~~~~~~l~-------------------~~iP~~~v~GNHD~~~ 209 (433)
..+.+. ..+||.|+++||+++..-. +++|... .++.+-+. ..+|++.++||||...
T Consensus 35 ~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 35 IVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 344443 6799999999999965321 3344321 12212111 1389999999999953
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-06 Score=82.00 Aligned_cols=182 Identities=15% Similarity=0.105 Sum_probs=97.2
Q ss_pred EEEEecCCCCCChHHHHHHh---h---cCCCceEEccccccccccch-----------hhHHHhhhhhhhhh-hCCCcee
Q 013955 139 FAVAGDLGQTGWTKSTLDHI---G---QCKYDVHLLPGDLSYADYMQ-----------HRWDTFGELVQPLA-SARPWMV 200 (433)
Q Consensus 139 f~~~gD~~~~~~~~~~l~~i---~---~~~pd~vl~~GD~~~~~~~~-----------~~w~~~~~~~~~l~-~~iP~~~ 200 (433)
|++.||+|.. ...+.+.+ . ..++|++|++||+....... ..+..|.+.++... ..+|+++
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999753 44444433 2 35799999999995322111 12233333333322 2477899
Q ss_pred ccCCCcCCCCCccccccccc-ccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC---CC--------CChHHHHHH-
Q 013955 201 TQGNHEKESIPLIMDAFQSY-NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD---YD--------EYSDQYRWL- 267 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y-~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~---~~--------~~~~Q~~WL- 267 (433)
+.||||... .+... ...|..|. -..-.....++++|++|..|..... +. -.+.++..+
T Consensus 79 i~GNHE~~~------~l~~l~~gg~v~~N---i~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y 149 (262)
T cd00844 79 IGGNHEASN------YLWELPYGGWVAPN---IYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAY 149 (262)
T ss_pred ECCCCCCHH------HHHhhcCCCeecCc---EEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhh
Confidence 999999631 11100 00111110 0000111245678999999876221 11 012333221
Q ss_pred ------HHHhhccccCCCCeEEEEecccccCCCCCCCC---------------CChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 268 ------KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG---------------EGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 268 ------~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~---------------~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
.+.|..... .. -|+++|.|+......... ........+..++++.++..+|+||.|
T Consensus 150 ~~r~~~~~kl~~~~~-~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H 226 (262)
T cd00844 150 HVRNIEVFKLKQLKQ-PI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLH 226 (262)
T ss_pred hhhHHHHHHHHhcCC-CC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCC
Confidence 111222211 23 599999998765432110 001234678899999999999999999
Q ss_pred c-ceeeeec
Q 013955 327 A-YERSIRV 334 (433)
Q Consensus 327 ~-y~r~~~~ 334 (433)
. |++..|.
T Consensus 227 ~~f~~~~~~ 235 (262)
T cd00844 227 VKFAALVPH 235 (262)
T ss_pred cccceecCC
Confidence 8 6666553
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=93.84 Aligned_cols=73 Identities=23% Similarity=0.246 Sum_probs=53.1
Q ss_pred eEEEEEecCCCC-CC-------------hHHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhhhhh-CCCcee
Q 013955 137 ITFAVAGDLGQT-GW-------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPLAS-ARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~-~~-------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~l~~-~iP~~~ 200 (433)
+||+.++|+|.+ .. ...+++.+.+.++||||++||+.+...+.. .-..+.+.++.+.. .+|+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 589999999988 21 123455566899999999999998765522 22345555555543 599999
Q ss_pred ccCCCcCCC
Q 013955 201 TQGNHEKES 209 (433)
Q Consensus 201 v~GNHD~~~ 209 (433)
+.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999854
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.5e-07 Score=85.00 Aligned_cols=204 Identities=17% Similarity=0.154 Sum_probs=96.8
Q ss_pred eEEEEEecCCCCCC---------------hHHHHHHhhcCCCc-eEEccccccccccchhhH---HHhhhhhhhhhhCCC
Q 013955 137 ITFAVAGDLGQTGW---------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRW---DTFGELVQPLASARP 197 (433)
Q Consensus 137 ~~f~~~gD~~~~~~---------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~w---~~~~~~~~~l~~~iP 197 (433)
++++.++|+|..-. ....++++++.+++ ++|.+||++........+ ....+.+..+ .+-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~--g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAM--GVD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhh--CCe
Confidence 47889999974211 12344555555565 899999998654431111 1112222222 122
Q ss_pred ceeccCCCcCCCCCcccccccccc------------------ccccc-----CCCCCC-CCCCceEEEEeCeEE--EEEE
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYN------------------ARWKM-----PFEESG-SNSNLYYSFDVAGAH--LIML 251 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~------------------~~~~~-----p~~~~~-~~~~~~ys~~~g~v~--fi~l 251 (433)
+.++||||+..... .+..+. ..|.. .....+ ..-..|.-++.++++ ||.+
T Consensus 79 -a~t~GNHefd~G~~---~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl 154 (288)
T cd07412 79 -ASAVGNHEFDEGYA---ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGA 154 (288)
T ss_pred -eeeecccccccCHH---HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEee
Confidence 46889999963221 111110 11110 000000 111344556788855 4555
Q ss_pred cccC-CC--C-------CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH--cCCcE
Q 013955 252 GSYA-DY--D-------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL 319 (433)
Q Consensus 252 ds~~-~~--~-------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~Vdl 319 (433)
-+.. .. . ....-.+-+++.+++.+..+.+.+|++.|........... ..........++.+ .++|+
T Consensus 155 ~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~ 232 (288)
T cd07412 155 VTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDV 232 (288)
T ss_pred cCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCE
Confidence 3211 00 0 0122234455544444433677899999987643221110 00011122344444 37999
Q ss_pred EEecCcccceeeeeccCCccCCCccEEEEECCCC
Q 013955 320 VLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGG 353 (433)
Q Consensus 320 vlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG 353 (433)
+|.||.|...... . ...+++..+.+|+-|
T Consensus 233 IlgGHsH~~~~~~-~----~~~~~~~v~q~g~~g 261 (288)
T cd07412 233 VFAGHTHQAYNCT-V----PAGNPRLVTQAGSYG 261 (288)
T ss_pred EEeCccCcccccc-c----cCcCCEEEEecChhh
Confidence 9999999875321 0 012456555555443
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.7e-06 Score=71.65 Aligned_cols=162 Identities=17% Similarity=0.173 Sum_probs=96.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccc
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~ 215 (433)
++++++||+|.... .....+.....++|+|||+||.+..... ..|. .. -..+++.|.||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-~~l~---~~-----~~~~i~~V~GN~D~~~~~---- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-DALE---GG-----LAAKLIAVRGNCDGEVDQ---- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-HHhh---cc-----cccceEEEEccCCCcccc----
Confidence 68999999997753 2334455567899999999999875432 1111 10 137899999999985310
Q ss_pred cccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC
Q 013955 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (433)
Q Consensus 216 ~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (433)
-..| .--.+.++++ +|.+.|--.+....
T Consensus 69 --------~~~p---------~~~~~~~~g~-----------------------------------ki~l~HGh~~~~~~ 96 (172)
T COG0622 69 --------EELP---------EELVLEVGGV-----------------------------------KIFLTHGHLYFVKT 96 (172)
T ss_pred --------ccCC---------hhHeEEECCE-----------------------------------EEEEECCCcccccc
Confidence 0111 1112333332 45555643222111
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEec
Q 013955 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREA 375 (433)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~ 375 (433)
....+..+-++.++|+++.||+|...... .+|++++.-|+...+.+ . .
T Consensus 97 --------~~~~l~~la~~~~~Dvli~GHTH~p~~~~--------~~~i~~vNPGS~s~pr~-----~--~--------- 144 (172)
T COG0622 97 --------DLSLLEYLAKELGADVLIFGHTHKPVAEK--------VGGILLVNPGSVSGPRG-----G--N--------- 144 (172)
T ss_pred --------CHHHHHHHHHhcCCCEEEECCCCcccEEE--------ECCEEEEcCCCcCCCCC-----C--C---------
Confidence 12455566667789999999999865544 24777787776543211 0 1
Q ss_pred cccEEEEEEEcCceEEEEEEE
Q 013955 376 SFGHGELKIVNSTHAFWSWHR 396 (433)
Q Consensus 376 ~~G~~~l~v~~~~~l~~~~~~ 396 (433)
.-+|+.+++.+ ..+...+..
T Consensus 145 ~~sy~il~~~~-~~~~~~~~~ 164 (172)
T COG0622 145 PASYAILDVDN-LEVEVLFLE 164 (172)
T ss_pred CcEEEEEEcCC-CEEEEEEee
Confidence 12678888754 346555554
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.8e-06 Score=77.81 Aligned_cols=190 Identities=17% Similarity=0.217 Sum_probs=99.3
Q ss_pred EEEEEecCCCCCCh----HHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 138 TFAVAGDLGQTGWT----KSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 138 ~f~~~gD~~~~~~~----~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
|++++||+ .+... ...+++++ +.++||++..||++-.+.... ....+.+..+ .+-+ .+.|||++... .
T Consensus 1 ~ilfigdi-~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~--G~D~-iTlGNH~fD~g-e 73 (255)
T cd07382 1 KILFIGDI-VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSA--GVDV-ITMGNHTWDKK-E 73 (255)
T ss_pred CEEEEEeC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhc--CCCE-EEecccccCcc-h
Confidence 57899998 22222 33445554 568999999999986542111 1111222221 2444 46699999643 1
Q ss_pred cccccccccccc---ccCCCC-CCCCCCceEEEEeCeEEEEEEcccCC-C-CCChHHHHHHHHHhhccccCCCCeEEEEe
Q 013955 213 IMDAFQSYNARW---KMPFEE-SGSNSNLYYSFDVAGAHLIMLGSYAD-Y-DEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (433)
Q Consensus 213 ~~~~~~~y~~~~---~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~-~-~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (433)
...+.+.. -.|.+- .......|..++.+++++-+++-... + .....-.+-+++.+++.+. +.+.+||.+
T Consensus 74 ----l~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~ 148 (255)
T cd07382 74 ----ILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIFVDF 148 (255)
T ss_pred ----HHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEE
Confidence 11111111 112111 11123456777888866555543211 1 1111223345555555544 567899999
Q ss_pred cccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCCCC
Q 013955 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGNKE 356 (433)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~~~ 356 (433)
|.-.. .....+.. .-..+||+++.||+|.......+ -|+|+.|++ +|.-|...
T Consensus 149 H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t~d~~i-----l~~gTa~itd~Gm~G~~~ 202 (255)
T cd07382 149 HAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQTADERI-----LPGGTAYITDVGMTGPYD 202 (255)
T ss_pred CCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccCCccEE-----eeCCeEEEecCccccCCC
Confidence 98421 11122332 22336999999999986333222 157998887 34445543
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.2e-06 Score=82.65 Aligned_cols=181 Identities=17% Similarity=0.168 Sum_probs=87.5
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC-CCceeccCC
Q 013955 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWMVTQGN 204 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~-iP~~~v~GN 204 (433)
++++.++|+|..-. ....++++++.++++++.+||++..... ..+..-...++.+... ..+ .++||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~-~~~GN 78 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDA-VTPGN 78 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcE-Ecccc
Confidence 47899999985321 1234445544467899999999875432 1111111122222222 344 57899
Q ss_pred CcCCCCCcccccccccccccccCCC-------CCCC-CCCceEEEEeC-eE--EEEEEcccC-CC--CC-------ChHH
Q 013955 205 HEKESIPLIMDAFQSYNARWKMPFE-------ESGS-NSNLYYSFDVA-GA--HLIMLGSYA-DY--DE-------YSDQ 263 (433)
Q Consensus 205 HD~~~~~~~~~~~~~y~~~~~~p~~-------~~~~-~~~~~ys~~~g-~v--~fi~lds~~-~~--~~-------~~~Q 263 (433)
||+..... .+....+.+..|.- ..+. .-..|--++.+ ++ -|+.+-+.. .. .+ ...-
T Consensus 79 Hefd~G~~---~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~ 155 (257)
T cd07408 79 HEFDYGLD---RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDP 155 (257)
T ss_pred ccccCCHH---HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecH
Confidence 99963211 12222222222210 0010 01234445677 64 455554421 00 00 0111
Q ss_pred HHHHHHH-hhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCccccee
Q 013955 264 YRWLKDD-LSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYER 330 (433)
Q Consensus 264 ~~WL~~~-L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 330 (433)
.+-+++. ..+..+.+++.+|++.|.+....... . ....+.. .-.++|++|.||.|....
T Consensus 156 ~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~---~---~~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 156 IEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP---W---TSTELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC---c---cHHHHHH--hCCCceEEEeCCCccccc
Confidence 2223333 22222236778999999886543210 0 1122222 124799999999998653
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.6e-06 Score=77.10 Aligned_cols=191 Identities=16% Similarity=0.205 Sum_probs=106.8
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh-cCCCceEEccccccccc-cchhhHHHhhhhhhhhhh-CCCceeccCCCcCCC
Q 013955 137 ITFAVAGDLGQTGWTK----STLDHIG-QCKYDVHLLPGDLSYAD-YMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKES 209 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~l~~i~-~~~pd~vl~~GD~~~~~-~~~~~w~~~~~~~~~l~~-~iP~~~v~GNHD~~~ 209 (433)
+|++++||. .+.... ..+..++ +.++||+|..||++-.+ +... +..+.|.. .+-++. .|||.++.
T Consensus 1 m~ilfiGDi-~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~------~~~~~L~~~GvDviT-~GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDV-YGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL------KIYEFLKQSGVNYIT-MGNHTWFQ 72 (266)
T ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH------HHHHHHHhcCCCEEE-ccchhccC
Confidence 589999998 332223 3444454 56799999999998543 2111 11222222 366665 49999964
Q ss_pred CCcc--cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccC--CCCC--ChHHHHHHHHHhhccccCCCCeEE
Q 013955 210 IPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA--DYDE--YSDQYRWLKDDLSKVDRKKTPWLL 283 (433)
Q Consensus 210 ~~~~--~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~--~~~~--~~~Q~~WL~~~L~~~~~~~~~~~i 283 (433)
.... ........+..+.|. ...+..+..+..++.++-+++-.. ...+ ...-.+-+++.+++.+. +++.+|
T Consensus 73 ge~~~~i~~~~~~lrpanyp~---~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk~-~~d~II 148 (266)
T TIGR00282 73 KLILDVVINQKDLVRPLNFDT---SFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLKK-DCDLIF 148 (266)
T ss_pred cHHHHHHhccccccccCCCCC---CCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhhc-CCCEEE
Confidence 3210 000011111112222 122345666778876666555321 1111 11123334555554443 466899
Q ss_pred EEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCCCC
Q 013955 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGNKE 356 (433)
Q Consensus 284 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~~~ 356 (433)
|.+|.-.. ..+.....+-+.+|++|+.-|+|....-..+. |+|+.|++ .|.-|...
T Consensus 149 Vd~Haeat------------sEK~a~~~~ldg~vsaVvGtHtHV~TaD~~il-----~~gtayitD~Gm~G~~~ 205 (266)
T TIGR00282 149 VDFHAETT------------SEKNAFGMAFDGYVTAVVGTHTHVPTADLRIL-----PKGTAYITDVGMTGPFG 205 (266)
T ss_pred EEeCCCCH------------HHHHHHHHHhCCCccEEEeCCCCCCCCcceeC-----CCCCEEEecCCcccCcc
Confidence 99997531 12455667778899999999999865444333 67999998 46556543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=2e-06 Score=81.39 Aligned_cols=157 Identities=18% Similarity=0.121 Sum_probs=79.1
Q ss_pred HHHHHhhcC-CCceE-EccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCC--
Q 013955 153 STLDHIGQC-KYDVH-LLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF-- 228 (433)
Q Consensus 153 ~~l~~i~~~-~pd~v-l~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~-- 228 (433)
..++++++. ++|.+ +.+||+...... ..+......++. ...+++.++.||||+..... .+....+.+..|.
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~-l~~~g~da~~GNHefd~g~~---~l~~~~~~~~~~~l~ 114 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDA-LNALGVDAMVGHWEFTYGPE---RVRELFGRLNWPFLA 114 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHH-HHhhCCeEEecccccccCHH---HHHHHHhhCCCCEEE
Confidence 345566666 89977 569999976543 122211122222 22366666669999964321 1111112222221
Q ss_pred -C----CCC-CCCCceEEEEeCeEE--EEEEcccCCCC--C--------ChHHHHHHHHHhhccc-cCCCCeEEEEeccc
Q 013955 229 -E----ESG-SNSNLYYSFDVAGAH--LIMLGSYADYD--E--------YSDQYRWLKDDLSKVD-RKKTPWLLVLLHVP 289 (433)
Q Consensus 229 -~----~~~-~~~~~~ys~~~g~v~--fi~lds~~~~~--~--------~~~Q~~WL~~~L~~~~-~~~~~~~iv~~H~P 289 (433)
+ ..+ ..-..|..++.++++ ||.+.+..... . .....+.+++.+++.. ..+.+.+|++.|-+
T Consensus 115 aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g 194 (264)
T cd07411 115 ANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNG 194 (264)
T ss_pred EEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0 001 111335556788755 55555421100 0 1233445555433322 23567899999987
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccce
Q 013955 290 WYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 329 (433)
.... .. +.++ .++|++|+||.|...
T Consensus 195 ~~~~------------~~---la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 195 LPVD------------VE---LAERVPGIDVILSGHTHERT 220 (264)
T ss_pred chhh------------HH---HHhcCCCCcEEEeCcccccc
Confidence 4210 11 2222 479999999999753
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.8e-06 Score=81.11 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=78.6
Q ss_pred HHHHhhcCCCc-eEEccccccccccchhh--HHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCC--
Q 013955 154 TLDHIGQCKYD-VHLLPGDLSYADYMQHR--WDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF-- 228 (433)
Q Consensus 154 ~l~~i~~~~pd-~vl~~GD~~~~~~~~~~--w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~-- 228 (433)
.++++++.+++ +++.+||++........ .+...+.+..+ .+. +.++||||+..... .+....+....|.
T Consensus 40 ~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~---~l~~~~~~~~~p~l~ 113 (281)
T cd07409 40 LVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE---GLAPFLNNLKFPVLS 113 (281)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc--CCC-EEEeccccccCCHH---HHHHHHHhCCCCEEE
Confidence 45555556777 55669999876543111 11222222222 134 45789999964322 1111111111111
Q ss_pred -C---CCC-----CCCCceEEEEeCeEE--EEEEcccCC--C-C--C---ChHHHHHHHHHhhccccCCCCeEEEEeccc
Q 013955 229 -E---ESG-----SNSNLYYSFDVAGAH--LIMLGSYAD--Y-D--E---YSDQYRWLKDDLSKVDRKKTPWLLVLLHVP 289 (433)
Q Consensus 229 -~---~~~-----~~~~~~ys~~~g~v~--fi~lds~~~--~-~--~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 289 (433)
+ ... ..-..|..++.++++ |+.+-+... . . . ..+..+.+++.+++.+..+.+.+|++.|..
T Consensus 114 aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G 193 (281)
T cd07409 114 ANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSG 193 (281)
T ss_pred EeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccC
Confidence 0 000 011345567788855 455443211 0 0 0 123345566666665444577899999986
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 290 WYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
... ...+.+-+ .++|++|.||.|...
T Consensus 194 ~~~------------d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 194 YEV------------DKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred chh------------HHHHHHcC--CCCcEEEeCCcCccc
Confidence 321 11222222 479999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.8e-06 Score=86.49 Aligned_cols=76 Identities=12% Similarity=0.218 Sum_probs=52.8
Q ss_pred CCCeEEEEEecCCCCCCh------HHHHHHhh---------cCCCceEEccccccccccc-------------hhhHHHh
Q 013955 134 QFPITFAVAGDLGQTGWT------KSTLDHIG---------QCKYDVHLLPGDLSYADYM-------------QHRWDTF 185 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------~~~l~~i~---------~~~pd~vl~~GD~~~~~~~-------------~~~w~~~ 185 (433)
....++++++|+|.+... +..++.+. ..+++.+|++||+++..+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 467899999999976531 23444555 5679999999999974221 0112344
Q ss_pred hhhhhhhhhCCCceeccCCCcCCC
Q 013955 186 GELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 186 ~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
.+.+..+...+|++.++||||...
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcchh
Confidence 556666666789999999999853
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-06 Score=82.23 Aligned_cols=72 Identities=18% Similarity=0.232 Sum_probs=50.8
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhhhhh-C-CCcee
Q 013955 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPLAS-A-RPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~l~~-~-iP~~~ 200 (433)
+||++++|+|.+... ..+++.+.+.+||+||++||+++...... ....+.+.++.+.. . +|++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 589999999976431 12344455789999999999998765422 22334555666543 3 89999
Q ss_pred ccCCCcCC
Q 013955 201 TQGNHEKE 208 (433)
Q Consensus 201 v~GNHD~~ 208 (433)
++||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=75.10 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=46.0
Q ss_pred EEEecCCCCCCh------HHHHHHhhcC-----CCceEEccccccccccc-------------hhhHHHhhhhhhhhhhC
Q 013955 140 AVAGDLGQTGWT------KSTLDHIGQC-----KYDVHLLPGDLSYADYM-------------QHRWDTFGELVQPLASA 195 (433)
Q Consensus 140 ~~~gD~~~~~~~------~~~l~~i~~~-----~pd~vl~~GD~~~~~~~-------------~~~w~~~~~~~~~l~~~ 195 (433)
++++|+|.+... +..++.+... ++|.++++||+++.... ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 678999975431 2233444333 57999999999975210 11234455566666667
Q ss_pred CCceeccCCCcCC
Q 013955 196 RPWMVTQGNHEKE 208 (433)
Q Consensus 196 iP~~~v~GNHD~~ 208 (433)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999985
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.1e-06 Score=81.18 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=72.7
Q ss_pred CCCeEEEEEecCCCCCCh------------------HHHHHHh-hcCCCceEEccccccccccc--hhhHHHhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGWT------------------KSTLDHI-GQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPL 192 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------------------~~~l~~i-~~~~pd~vl~~GD~~~~~~~--~~~w~~~~~~~~~l 192 (433)
...+|++.++|+|.-+.. .+..... ...+||.++++||+.+++.. .++|.+..+-++.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 578999999999864410 1112211 26799999999999986543 45675443334444
Q ss_pred h---hCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC
Q 013955 193 A---SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD 256 (433)
Q Consensus 193 ~---~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~ 256 (433)
. ..+|++.++||||.+.... .......||..-. ++....|+.|+..|+++|++..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~---~~~~~i~Rfe~~f------g~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE---LIPEWIDRFESVF------GPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc---cchhHHHHHHHhh------cchhhhhccCCceeEEeeehhh
Confidence 3 2599999999999964321 1111223332111 2345668999999999998654
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.5e-05 Score=74.39 Aligned_cols=199 Identities=17% Similarity=0.207 Sum_probs=96.0
Q ss_pred CCeEEEEEecCCCCCC--------------hHHHHHHhh----cCCCc-eEEccccccccccchh----hHHHhhhhhhh
Q 013955 135 FPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQP 191 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~--------------~~~~l~~i~----~~~pd-~vl~~GD~~~~~~~~~----~w~~~~~~~~~ 191 (433)
.+++|+..+|+|..-. ..+.+++++ +.+++ ++|..||......... .+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN- 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR- 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH-
Confidence 5689999999985311 022233332 34555 6678999987653311 1222222222
Q ss_pred hhhCCCc-eeccCCCcCCCCCcccccccccccccccCC---C-----C--CC-CCCCceEEEEeC-eEE--EEEEcccCC
Q 013955 192 LASARPW-MVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----E--SG-SNSNLYYSFDVA-GAH--LIMLGSYAD 256 (433)
Q Consensus 192 l~~~iP~-~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~-----~--~~-~~~~~~ys~~~g-~v~--fi~lds~~~ 256 (433)
.+++ +.++||||+.........+..+.+....|. | + .. .....|..++.+ +++ +|.+-+...
T Consensus 83 ---~mgyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~ 159 (282)
T cd07407 83 ---MMPYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFK 159 (282)
T ss_pred ---hcCCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecccc
Confidence 2332 458999999532210000111111111111 0 0 00 111235556665 655 555543211
Q ss_pred -------CCCC--hHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCc-EEEecCc
Q 013955 257 -------YDEY--SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVD-LVLAGHV 325 (433)
Q Consensus 257 -------~~~~--~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~Vd-lvlsGH~ 325 (433)
+... ..+.+|+.+.|++. +.+.+|+++|....... ...+....+.++. ++| ++|.||.
T Consensus 160 ~~~~~~~f~d~~~~~~~~~v~~~l~~~---~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~GHs 228 (282)
T cd07407 160 GAANGVTVQPVADVVQEPWFQDAINNE---DVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGGHS 228 (282)
T ss_pred cCCCCcEEcCHHHHHHHHHHHHHHHhc---CCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeCCc
Confidence 1111 12234887777742 56779999999754321 1111122333344 567 7999999
Q ss_pred ccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 326 HAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 326 H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
|..... ++ .+++..+.+|.-|..
T Consensus 229 H~~~~~-~~------~~~~~ivq~G~~g~~ 251 (282)
T cd07407 229 HVRDFT-QY------DSSSTGLESGRYLET 251 (282)
T ss_pred ccccce-ec------cCcEEEEeccchhhc
Confidence 975322 11 135555555554444
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.4e-06 Score=77.82 Aligned_cols=64 Identities=23% Similarity=0.200 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
|++++||+|.... ..++++.+. ..++|.++++||+++.+.... +.++.+.. .+++.+.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~------~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESL------ACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH------HHHHHHhc-CCEEEeECCChHH
Confidence 6899999985421 223444443 246999999999998654321 22222222 4688999999974
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.1e-06 Score=74.22 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=92.4
Q ss_pred EEecCCCCCChH----HHHHHhhcC--CCceEEccccccccccchhhHHHhh----hhhhhhhh-CCCceeccCCCcCCC
Q 013955 141 VAGDLGQTGWTK----STLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFG----ELVQPLAS-ARPWMVTQGNHEKES 209 (433)
Q Consensus 141 ~~gD~~~~~~~~----~~l~~i~~~--~pd~vl~~GD~~~~~~~~~~w~~~~----~~~~~l~~-~iP~~~v~GNHD~~~ 209 (433)
.++|.|.++... -.++-+... +.|.+.++||+++.--....|.+.. ..+..+.+ ..|++.++||||..-
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Dfll 81 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDFLL 81 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHHHH
Confidence 689999885432 233444433 5599999999986422222343332 22333344 499999999999732
Q ss_pred CCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeE-EEEecc
Q 013955 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWL-LVLLHV 288 (433)
Q Consensus 210 ~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~-iv~~H~ 288 (433)
. ..+...+. .....+.+-.+++-|-+++++-.- .+.....+..|+....... |. .++.+.
T Consensus 82 ~-------~~f~~~~g-----~~~l~~~~~~~~l~g~~~Ll~HGD-~f~t~~~~y~~~r~~~~~~------~~~~lflnl 142 (237)
T COG2908 82 G-------KRFAQEAG-----GMTLLPDPIVLDLYGKRILLAHGD-TFCTDDRAYQWFRYKVHWA------WLQLLFLNL 142 (237)
T ss_pred H-------HHHHhhcC-----ceEEcCcceeeeecCcEEEEEeCC-cccchHHHHHHHHHHcccH------HHHHHHHHh
Confidence 1 11111111 000012222334444455554321 1222344444444332221 11 111122
Q ss_pred cc----------cCCC--CCC-CCCC----hhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 289 PW----------YNSN--EAH-QGEG----DGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 289 P~----------~~~~--~~~-~~~~----~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
|. .+.+ ... .... +...+.....+++++||.+++||+|.-.-.. -.++.|++.|+
T Consensus 143 ~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~--------i~~~~yi~lGd 214 (237)
T COG2908 143 PLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN--------IPGITYINLGD 214 (237)
T ss_pred HHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc--------CCCceEEecCc
Confidence 21 1111 000 0000 1234677788899999999999999854322 23688998886
Q ss_pred CC
Q 013955 352 GG 353 (433)
Q Consensus 352 gG 353 (433)
--
T Consensus 215 W~ 216 (237)
T COG2908 215 WV 216 (237)
T ss_pred ch
Confidence 53
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.8e-05 Score=89.85 Aligned_cols=184 Identities=17% Similarity=0.193 Sum_probs=93.7
Q ss_pred CCeEEEEEecCCCCCC----hHHHHHHhhcCCCceEEc-cccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 135 FPITFAVAGDLGQTGW----TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~----~~~~l~~i~~~~pd~vl~-~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
..++++.++|+|..-. ....++++++.+|+.+++ +||++..... ..+......++.+...-.-+.++||||+..
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~~~GNHEfd~ 737 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMMKEMGYDASTFGNHEFDW 737 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHHhCcCCCEEEeccccccc
Confidence 4599999999984421 234566667778898766 9999875532 111111112222222123356999999954
Q ss_pred CCccccccccccc--------------ccccC-CC----CCCC---CCCceEEEEeCeEE--EEEEcccC-CC----C--
Q 013955 210 IPLIMDAFQSYNA--------------RWKMP-FE----ESGS---NSNLYYSFDVAGAH--LIMLGSYA-DY----D-- 258 (433)
Q Consensus 210 ~~~~~~~~~~y~~--------------~~~~p-~~----~~~~---~~~~~ys~~~g~v~--fi~lds~~-~~----~-- 258 (433)
... .+..+.. .|.+- .| ..+. ....|.-++.++++ ||.+-+.. .. .
T Consensus 738 g~~---~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~~ 814 (1163)
T PRK09419 738 GPD---VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGNV 814 (1163)
T ss_pred ChH---HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCCc
Confidence 321 1111100 01100 00 0111 11245556788755 55554321 00 0
Q ss_pred ---CChHHHHHHHHHhhccc-cCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccce
Q 013955 259 ---EYSDQYRWLKDDLSKVD-RKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (433)
Q Consensus 259 ---~~~~Q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~ 329 (433)
.-....+.+++..++.+ ..+.+.+|+++|......... +. .....|.++. +||++|.||+|..-
T Consensus 815 ~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 815 KNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 01223334444444433 236778999999986432111 11 1233444443 79999999999754
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=3e-06 Score=84.86 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=50.0
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchhhH-HHhhhhhhhhhh-CCCceec
Q 013955 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRW-DTFGELVQPLAS-ARPWMVT 201 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w-~~~~~~~~~l~~-~iP~~~v 201 (433)
+||++++|+|.+... ..+++.+.+.+||+||++||+++........ ..+.+++..+.. .+|++++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 589999999986321 1233445688999999999999765432221 233444455543 4899999
Q ss_pred cCCCcCCC
Q 013955 202 QGNHEKES 209 (433)
Q Consensus 202 ~GNHD~~~ 209 (433)
+||||...
T Consensus 81 ~GNHD~~~ 88 (407)
T PRK10966 81 AGNHDSVA 88 (407)
T ss_pred cCCCCChh
Confidence 99999853
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.6e-06 Score=76.64 Aligned_cols=66 Identities=20% Similarity=0.035 Sum_probs=41.8
Q ss_pred EEEecCCCCCC-hHHHHHHhh--------cCCCceEEccccccccccchhhHHHhhhhhhhhh-----hCCCceeccCCC
Q 013955 140 AVAGDLGQTGW-TKSTLDHIG--------QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-----SARPWMVTQGNH 205 (433)
Q Consensus 140 ~~~gD~~~~~~-~~~~l~~i~--------~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-----~~iP~~~v~GNH 205 (433)
+++||+|.... ..++++.+. ..+.|.++++||+++.+....+ ..+.+..+. ...+++.++|||
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~---vl~~l~~l~~~~~~~~~~v~~l~GNH 77 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIE---ILWLLYKLEQEAAKAGGKVHFLLGNH 77 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHH---HHHHHHHHHHHHHhcCCeEEEeeCCC
Confidence 47999986532 234454443 3478999999999987653222 222222221 236799999999
Q ss_pred cCC
Q 013955 206 EKE 208 (433)
Q Consensus 206 D~~ 208 (433)
|..
T Consensus 78 E~~ 80 (208)
T cd07425 78 ELM 80 (208)
T ss_pred cHH
Confidence 984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.8e-06 Score=70.41 Aligned_cols=118 Identities=16% Similarity=0.109 Sum_probs=74.7
Q ss_pred EEEecCCCCCChHHHHHHhh-----cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 140 AVAGDLGQTGWTKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 140 ~~~gD~~~~~~~~~~l~~i~-----~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
+++||.+.. ..+++++++ +.++|++|++||+.-.......|..+..-. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g~--~~~pipTyf~ggn~~-------- 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDGS--KKVPIPTYFLGGNNP-------- 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcCC--ccCCCCEEEECCCCC--------
Confidence 467888543 455555543 568999999999986544333444433322 123488999999986
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
+.-|+++|.|++...
T Consensus 69 -----------------------------------------------------------------~~DILlTh~wP~gi~ 83 (150)
T cd07380 69 -----------------------------------------------------------------GVDILLTSEWPKGIS 83 (150)
T ss_pred -----------------------------------------------------------------CCCEEECCCCchhhh
Confidence 124778888776543
Q ss_pred CCCC-----CCChhHHHHHHHHHHHcCCcEEEecCccc-ceeeeecc
Q 013955 295 EAHQ-----GEGDGMMAIMEPLLYAASVDLVLAGHVHA-YERSIRVN 335 (433)
Q Consensus 295 ~~~~-----~~~~~~~~~l~~l~~~~~VdlvlsGH~H~-y~r~~~~~ 335 (433)
.... .........+.+++++.++...||||.|. |||. |..
T Consensus 84 ~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~ 129 (150)
T cd07380 84 KLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYR 129 (150)
T ss_pred hhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Ccc
Confidence 2110 00112346778889999999999999995 5654 443
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.3e-05 Score=72.51 Aligned_cols=184 Identities=20% Similarity=0.209 Sum_probs=85.9
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHhhc-----CCCceEEccccccccccchhhHH---HhhhhhhhhhhCCC
Q 013955 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRWD---TFGELVQPLASARP 197 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~l~~i~~-----~~pd~vl~~GD~~~~~~~~~~w~---~~~~~~~~l~~~iP 197 (433)
++++..+|+|..-. ....++++++ ...-+++.+||+...... ..+. ...+.+..+. .-
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~~~n~~g--~D 77 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLVG--YD 77 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHHHHHhhC--Cc
Confidence 47888999975321 1234455543 234588899999854332 1211 1112222221 33
Q ss_pred ceeccCCCcCCCCCccccccccccc--ccccCC-C---CCC-CCCCceEEEEeCeEE--EEEEcccCC-C--CC----C-
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNA--RWKMPF-E---ESG-SNSNLYYSFDVAGAH--LIMLGSYAD-Y--DE----Y- 260 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~--~~~~p~-~---~~~-~~~~~~ys~~~g~v~--fi~lds~~~-~--~~----~- 260 (433)
..++||||+..... .+..... .|.+.. | ..+ ..-..|.-++.++++ |+.+-+... . .. +
T Consensus 78 -a~~~GNHEfD~G~~---~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~ 153 (285)
T cd07405 78 -AMAVGNHEFDNPLE---VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGI 153 (285)
T ss_pred -EEeecccccccCHH---HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCc
Confidence 44779999964321 1111111 111110 0 001 112345567788766 444433211 0 00 0
Q ss_pred --hHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 261 --SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 261 --~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
....+=+++.+++.+.++++.+|+++|......... .........+.+.+...++|++|.||.|...
T Consensus 154 ~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 154 EFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred EEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 112222222222222225678999999986432210 1110111233333333589999999999864
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.8e-06 Score=74.41 Aligned_cols=73 Identities=21% Similarity=0.103 Sum_probs=46.1
Q ss_pred EECCCCCCCeEEEEEecCCCCCC-hHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCC
Q 013955 128 FKTPPAQFPITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (433)
Q Consensus 128 F~T~p~~~~~~f~~~gD~~~~~~-~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNH 205 (433)
|+..+.+.--|++++||+|.... ..++++.+.. .+.|-++++||+++.+....+ .++-+. ...+..+.|||
T Consensus 8 ~~~~~~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~------vl~~l~-~~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAGHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLR------CLQLLE-EHWVRAVRGNH 80 (218)
T ss_pred eecccCCCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHH------HHHHHH-cCCceEeeCch
Confidence 33333333348999999986532 3456666653 368999999999987654221 122222 13467899999
Q ss_pred cC
Q 013955 206 EK 207 (433)
Q Consensus 206 D~ 207 (433)
|.
T Consensus 81 E~ 82 (218)
T PRK11439 81 EQ 82 (218)
T ss_pred HH
Confidence 96
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.4e-05 Score=73.28 Aligned_cols=64 Identities=20% Similarity=0.185 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
-|++++||+|.... .+++++.+. ..+.|.++++||+++.+....+ .++.+.. -.++.+.||||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~------~l~~l~~-~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLN------VLRLLNQ-PWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHH------HHHHHhh-CCcEEEECchHH
Confidence 38999999986522 234455554 4578999999999986654221 1222221 246789999997
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.8e-05 Score=76.81 Aligned_cols=183 Identities=19% Similarity=0.185 Sum_probs=97.3
Q ss_pred CCCeEEEEEecCCCCCC------------h----HHHHHHhhcC-CCceEEccccccccccchhh---HHHhhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW------------T----KSTLDHIGQC-KYDVHLLPGDLSYADYMQHR---WDTFGELVQPLA 193 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~------------~----~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~---w~~~~~~~~~l~ 193 (433)
...++|+...|+|..-. . ...++++++. +..++|.+||++........ .....+.+..+
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m- 102 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL- 102 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc-
Confidence 56799999999976433 1 1234444433 45689999999987554222 11222223222
Q ss_pred hCCCceeccCCCcCCCCCcccccccccccccccCC---C---C--CC-CCCCceEEEEeCeEE--EEEEcccC-----CC
Q 013955 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---E--SG-SNSNLYYSFDVAGAH--LIMLGSYA-----DY 257 (433)
Q Consensus 194 ~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~---~--~~-~~~~~~ys~~~g~v~--fi~lds~~-----~~ 257 (433)
-.=+.++||||+..... .+..+......|. | . .. .....|.-++.++++ +|.+.+.. ..
T Consensus 103 --~yDa~tiGNHEFd~g~~---~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~ 177 (517)
T COG0737 103 --GYDAMTLGNHEFDYGLE---ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKP 177 (517)
T ss_pred --CCcEEeecccccccCHH---HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccc
Confidence 22355899999964321 1111111111120 0 0 11 112567778888754 56655411 00
Q ss_pred C-----CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccc
Q 013955 258 D-----EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (433)
Q Consensus 258 ~-----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 328 (433)
. .-....+++++.+.+.+.++.+-+|+++|.+............. ...... .++|+++.||.|.+
T Consensus 178 ~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~-----~~iD~i~~GH~H~~ 247 (517)
T COG0737 178 NAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV-----PGIDLIIGGHSHTV 247 (517)
T ss_pred cccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----cCcceEeccCCccc
Confidence 1 11345667777777665534677999999987654321110000 000000 34999999999964
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00037 Score=73.04 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=87.7
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhc-----CCCceEEccccccccccchhhHH---Hhhhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRWD---TFGELVQPLAS 194 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~l~~i~~-----~~pd~vl~~GD~~~~~~~~~~w~---~~~~~~~~l~~ 194 (433)
...++|+.++|+|..-.. ...++++++ ...-++|.+||++..... ..+. ...+.+..+.
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-s~~~~g~~~i~~mN~~g- 109 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLIG- 109 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-hhhcCCchhHHHHhcCC-
Confidence 457899999999864220 123444432 234578889999864432 1111 1112222221
Q ss_pred CCCceeccCCCcCCCCCcccccccccccccccCC---C----CCC-CCCCceEEEEeCeEE--EEEEcccCC--C-CC--
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAGAH--LIMLGSYAD--Y-DE-- 259 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~-~~~~~~ys~~~g~v~--fi~lds~~~--~-~~-- 259 (433)
.- +.++||||+..... .+.........|. | ..+ ..-..|.-++.++++ ||.+-+... + .+
T Consensus 110 -~D-a~tlGNHEFD~G~~---~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~ 184 (551)
T PRK09558 110 -YD-AMAVGNHEFDNPLS---VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEY 184 (551)
T ss_pred -CC-EEcccccccCcCHH---HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCC
Confidence 33 45789999964321 1111111111111 0 001 112345557888865 455433211 0 00
Q ss_pred -----ChHHHHHHHHHhhcccc-CCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 260 -----YSDQYRWLKDDLSKVDR-KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 260 -----~~~Q~~WL~~~L~~~~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.....+-+++.+++.+. .+.+.+|+++|......... .........+.+-+...+||++|.||.|..-
T Consensus 185 ~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 185 FTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred cCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 01112223333333321 25778999999987432211 1100011222222223379999999999753
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=4.4e-05 Score=67.39 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=33.9
Q ss_pred HHhhcCCCceEEccccccccccch--hhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 156 DHIGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 156 ~~i~~~~pd~vl~~GD~~~~~~~~--~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
+.+.+.+||.++++||+++..... ..+.... ........+|++.++||||..
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGLSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHhcCCCEEEEeCcccccccccCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 334578999999999999754321 1122211 222233458999999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0006 Score=71.34 Aligned_cols=155 Identities=14% Similarity=0.148 Sum_probs=72.9
Q ss_pred HHHHhhcCCC-ceEEccccccccccchhh--HHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCC--
Q 013955 154 TLDHIGQCKY-DVHLLPGDLSYADYMQHR--WDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF-- 228 (433)
Q Consensus 154 ~l~~i~~~~p-d~vl~~GD~~~~~~~~~~--w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~-- 228 (433)
.++++++..+ -++|.+||++........ .....+.+..+ -.=+.++||||+..... .+..+......|.
T Consensus 40 ~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~---g~Da~~lGNHEFd~G~~---~l~~~~~~~~fp~l~ 113 (550)
T TIGR01530 40 EINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA---GFDFFTLGNHEFDAGNE---GLKEFLEPLEIPVLS 113 (550)
T ss_pred HHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc---CCCEEEeccccccCCHH---HHHHHHHhCCCCEEE
Confidence 3445554444 478899999865432111 11111222221 23356899999964321 1111111111111
Q ss_pred -C---CCC-C---CCCceEEEEeCe--EEEEEEcccCC-C---CCC-----hHHHHHHHHHhhccccCCCCeEEEEeccc
Q 013955 229 -E---ESG-S---NSNLYYSFDVAG--AHLIMLGSYAD-Y---DEY-----SDQYRWLKDDLSKVDRKKTPWLLVLLHVP 289 (433)
Q Consensus 229 -~---~~~-~---~~~~~ys~~~g~--v~fi~lds~~~-~---~~~-----~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 289 (433)
| ... . .-..|.-++.++ +-||.+.+... . ... ....+=+++..++.++.+.+.+|+++|..
T Consensus 114 aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g 193 (550)
T TIGR01530 114 ANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAG 193 (550)
T ss_pred EeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0 000 0 113455577887 55677754211 0 010 11122222222222222567799999985
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccce
Q 013955 290 WYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 329 (433)
... + ..+.++ .+||++|.||+|..-
T Consensus 194 ~~~---------d------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 194 FEK---------N------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred cHH---------H------HHHHhcCCCCCEEEeCCCCccc
Confidence 311 0 122333 279999999999864
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0006 Score=66.07 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=25.1
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccce
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~ 329 (433)
+.+-+|+++|..-+.. + ..|.++. ++|++|.||+|..-
T Consensus 207 gvD~II~LsH~g~~~~--------d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 207 GINKIILLSHLQQISI--------E------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCEEEEEecccccch--------H------HHHHhcCCCCCEEEeCCCCccC
Confidence 5667999999841110 1 1234443 79999999999863
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00061 Score=67.70 Aligned_cols=76 Identities=12% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCeEEEEEecCCCCCC------hHHHHHHhh-----cCCCceEEccccccccccc-------------hhhHHHhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW------TKSTLDHIG-----QCKYDVHLLPGDLSYADYM-------------QHRWDTFGELV 189 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~------~~~~l~~i~-----~~~pd~vl~~GD~~~~~~~-------------~~~w~~~~~~~ 189 (433)
..++++++++|.|.+.. ....++.+. ..+...++++||.++.-+. .++++.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 56789999999988643 123444443 3456899999999985432 23556666666
Q ss_pred hhhhhCCCceeccCCCcCCC
Q 013955 190 QPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~ 209 (433)
..+...+-++..|||||...
T Consensus 303 ~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred hhCCCCceEEEecCCCCccc
Confidence 66666788999999999953
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00014 Score=67.46 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=43.8
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcC--CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~--~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
++++++||+|.... ..++++.+... ..|.++++||+++.+.... +.+..+++.+....+++.++||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~--~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK--DVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH--HHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 47899999985321 23455555432 3599999999998765321 22222222222235789999999973
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00016 Score=66.60 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=46.9
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHh----hcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCc
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHI----GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPW 198 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i----~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~ 198 (433)
-+.++++|+|.+... .+.++++ .+.+||.+|++||+.+.......|..+.+.++.+. .++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~--~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF--RDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC--CcE
Confidence 457899999876421 1344444 46789999999999975443234555444454432 699
Q ss_pred eeccCCCcC
Q 013955 199 MVTQGNHEK 207 (433)
Q Consensus 199 ~~v~GNHD~ 207 (433)
+.++||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999997
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0018 Score=73.80 Aligned_cols=57 Identities=16% Similarity=0.255 Sum_probs=33.6
Q ss_pred HHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccce
Q 013955 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (433)
Q Consensus 268 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~ 329 (433)
++.+++.++.+++.+|+++|...-...... +. .....+|.++. +||++|.||.|...
T Consensus 224 ~~~v~~lk~~gaDvII~l~H~G~~~~~~~~-~~----en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 224 NKTIPEMKKGGADVIVALAHSGIESEYQSS-GA----EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHHHHHhcCCCEEEEEeccCcCCCCCCC-Cc----chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 333333333367789999999864332111 11 12233444443 79999999999864
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0049 Score=55.98 Aligned_cols=192 Identities=18% Similarity=0.244 Sum_probs=106.6
Q ss_pred eEEEEEecCCCCCChHH----HHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCC
Q 013955 137 ITFAVAGDLGQTGWTKS----TLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~~----~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~ 211 (433)
+|++++||+ .+...+. .|..++ +.++||+|..|-++-.+.- -.|+.+.++++ ..+-+ .+.|||=+....
T Consensus 1 mriLfiGDv-vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~G-it~k~y~~l~~---~G~dv-iT~GNH~wd~~e 74 (266)
T COG1692 1 MRILFIGDV-VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFG-ITEKIYKELLE---AGADV-ITLGNHTWDQKE 74 (266)
T ss_pred CeEEEEecc-cCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcC-CCHHHHHHHHH---hCCCE-EecccccccchH
Confidence 589999999 3323333 334444 6689999999999754422 23444443332 23444 489999885321
Q ss_pred cccccccccccccccCCCCC-CCCCCceEEEEeCeEEEEEEccc--CCCCC-ChHHHHHHHHHhhccccCCCCeEEEEec
Q 013955 212 LIMDAFQSYNARWKMPFEES-GSNSNLYYSFDVAGAHLIMLGSY--ADYDE-YSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (433)
Q Consensus 212 ~~~~~~~~y~~~~~~p~~~~-~~~~~~~ys~~~g~v~fi~lds~--~~~~~-~~~Q~~WL~~~L~~~~~~~~~~~iv~~H 287 (433)
. -.+..-..++-.|.|-. +..+..|.-|...+..+.++|-. ..... -..-..-+++.|.+.+. +++.+||-+|
T Consensus 75 i--~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~~-~~~~iiVDFH 151 (266)
T COG1692 75 I--LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIKL-GTDLIIVDFH 151 (266)
T ss_pred H--HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCcc-CCceEEEEcc
Confidence 1 01111112233344321 23456677788777665555532 11111 12334456667776654 4567899888
Q ss_pred ccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCC
Q 013955 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGN 354 (433)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 354 (433)
.-..+.. .-.-++-+..|.+|+-=|+|....-..+. ++|+.|++ .|.-|.
T Consensus 152 AEtTSEK------------~a~g~yldGrvsavvGTHTHV~TaD~rIL-----~~GTayiTDvGMtG~ 202 (266)
T COG1692 152 AETTSEK------------NAFGWYLDGRVSAVVGTHTHVPTADERIL-----PKGTAYITDVGMTGP 202 (266)
T ss_pred ccchhhh------------hhhheEEcCeEEEEEeccCccccccceec-----CCCcEEEecCccccc
Confidence 7532211 11122334478899999999865444433 67999987 344343
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0038 Score=67.36 Aligned_cols=66 Identities=24% Similarity=0.218 Sum_probs=37.2
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCC
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKE 356 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~ 356 (433)
+++.+|+++|...-.... .... +...-.+.+. +||++|.||+|..-... -+|+..+.+|.-|...
T Consensus 244 GaDvIIaLsH~G~~~d~~---~~~~---ena~~~l~~v~gID~IlgGHsH~~~~~~--------ingv~vvqaG~~G~~L 309 (780)
T PRK09418 244 GADVIVALAHSGVDKSGY---NVGM---ENASYYLTEVPGVDAVLMGHSHTEVKDV--------FNGVPVVMPGVFGSNL 309 (780)
T ss_pred CCCEEEEEeccCcccccc---cccc---hhhhHHHhcCCCCCEEEECCCCCccccc--------CCCEEEEEcChhhcEE
Confidence 577899999987643211 1110 1111113443 79999999999864321 1355555566555554
Q ss_pred c
Q 013955 357 G 357 (433)
Q Consensus 357 ~ 357 (433)
|
T Consensus 310 G 310 (780)
T PRK09418 310 G 310 (780)
T ss_pred E
Confidence 3
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0032 Score=58.83 Aligned_cols=133 Identities=14% Similarity=0.187 Sum_probs=74.9
Q ss_pred EEEEecCCCCCCh------HHHHHHhh-----------cCCCceEEccccccccccc-------------------hhhH
Q 013955 139 FAVAGDLGQTGWT------KSTLDHIG-----------QCKYDVHLLPGDLSYADYM-------------------QHRW 182 (433)
Q Consensus 139 f~~~gD~~~~~~~------~~~l~~i~-----------~~~pd~vl~~GD~~~~~~~-------------------~~~w 182 (433)
+++++|.+.+... +..++.+. ..+..-+|++||.+...+. ....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 5778888765442 12233332 1244579999999875432 1224
Q ss_pred HHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCC-CCCCCCCceEEEEeCeEEEEEEcccC-----C
Q 013955 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA-----D 256 (433)
Q Consensus 183 ~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~-----~ 256 (433)
+.+.+++..+...+|+..+|||||-.....-+..+.. ..|..... ..-..-...|.|+++|++|++..... .
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~k 159 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHR--CLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDILK 159 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCH--HHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHHHH
Confidence 4555667777788999999999998543221122211 11110000 00011133467999999999987642 1
Q ss_pred CCCChHHHHHHHHHhhc
Q 013955 257 YDEYSDQYRWLKDDLSK 273 (433)
Q Consensus 257 ~~~~~~Q~~WL~~~L~~ 273 (433)
+...+.-++.|+..|+.
T Consensus 160 y~~~~~~l~~me~~L~w 176 (257)
T cd07387 160 YSSLESRLDILERTLKW 176 (257)
T ss_pred hCCCCCHHHHHHHHHHh
Confidence 22334446777777764
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0064 Score=65.80 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=33.0
Q ss_pred HHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccc
Q 013955 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (433)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 328 (433)
+.+++...+.+.++++.+|++.|............++ .. ..|-+--+||++|.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--VG---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--hh---hHHhcCCCCCEEEECCCCCc
Confidence 3444444444333677899999987643211111111 11 12222248999999999984
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0029 Score=58.19 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=89.7
Q ss_pred EEEecCCCCCChH----HHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 140 AVAGDLGQTGWTK----STLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 140 ~~~gD~~~~~~~~----~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
+++||+ .+.... ..|..++ +.++||||..|.++-.+.- -..+.+.+++ ...+-++ +.|||=+......
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~---~~GvDvi-T~GNH~wdkkei~- 73 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF---KAGVDVI-TMGNHIWDKKEIF- 73 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH---HHT-SEE-E--TTTTSSTTHH-
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH---hcCCCEE-ecCcccccCcHHH-
Confidence 467887 232223 3344444 6799999999999854322 1111111111 1235554 8999988543210
Q ss_pred ccccccccccccCCCCC-CCCCCceEEEEeCeEEEEEEccc--CCCCCChHHHHHHHHHhhccccCCCCeEEEEeccccc
Q 013955 215 DAFQSYNARWKMPFEES-GSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~-~~~~~~~ys~~~g~v~fi~lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (433)
.+-.-..+.-.|.|-+ +..+..|..++.++.++.++|-. ........-...+++.|++... +.+.+||=+|.=..
T Consensus 74 -~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l~~-~~~~iiVDFHAEaT 151 (253)
T PF13277_consen 74 -DFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEELKE-ETDIIIVDFHAEAT 151 (253)
T ss_dssp -HHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S-H
T ss_pred -HHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhccc-cCCEEEEEeecCcH
Confidence 1111112223344422 34567888899998777777652 2222222334445555555322 56778888887321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCCC
Q 013955 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGNK 355 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~~ 355 (433)
+ . +.-.-.+-+.+|.+|+--|+|....-..+. |+|+.||+ .|.-|..
T Consensus 152 S-----------E-K~A~g~~lDGrvsaV~GTHTHVqTaDerIL-----p~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 152 S-----------E-KQAMGWYLDGRVSAVVGTHTHVQTADERIL-----PGGTAYITDVGMTGPY 199 (253)
T ss_dssp H-----------H-HHHHHHHHBTTBSEEEEESSSS-BS--EE------TTS-EEES---EBEES
T ss_pred H-----------H-HHHHHHHhCCcEEEEEeCCCCccCchhhcc-----CCCCEEEecCccccCc
Confidence 1 1 333445666789999999999864433333 68999987 3544544
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.001 Score=63.20 Aligned_cols=173 Identities=21% Similarity=0.226 Sum_probs=93.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhh---cCCCceEEccccccccccc--------hhhHH---Hhhhhhh-hhhhCCCcee
Q 013955 137 ITFAVAGDLGQTGWT-KSTLDHIG---QCKYDVHLLPGDLSYADYM--------QHRWD---TFGELVQ-PLASARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~l~~i~---~~~pd~vl~~GD~~~~~~~--------~~~w~---~~~~~~~-~l~~~iP~~~ 200 (433)
+|+++-|++|..-.. -+.+..+. ..+.|++|++||+---... ...+. .|.+... +..+.+|-++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 588999999754221 22334443 4599999999999421111 12222 2333221 2234478888
Q ss_pred ccCCCcCCCCCcccccccccccccccCCCCCCCCCCceE-----EEEeCeEEEEEEccc---CCCC-------CC--h--
Q 013955 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYY-----SFDVAGAHLIMLGSY---ADYD-------EY--S-- 261 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~lds~---~~~~-------~~--~-- 261 (433)
+=||||..+ |. +.+|..+- ...+.|| .+.+||+|+-.|+.- .+|. +. +
T Consensus 81 IGGNHEAsn----------yL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~sti 147 (456)
T KOG2863|consen 81 IGGNHEASN----------YL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTI 147 (456)
T ss_pred ecCchHHHH----------HH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhh
Confidence 999999842 11 12232100 0113444 367899999998862 1211 00 0
Q ss_pred ----HHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCCh-----------------hHHHHHHHHHHHcCCcEE
Q 013955 262 ----DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD-----------------GMMAIMEPLLYAASVDLV 320 (433)
Q Consensus 262 ----~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~-----------------~~~~~l~~l~~~~~Vdlv 320 (433)
.-++.=...|++. +.|--|.++|.=+... .++++.. .....+++||++-++..+
T Consensus 148 RsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yW 222 (456)
T KOG2863|consen 148 RSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYW 222 (456)
T ss_pred hhhhhhhhhhhHHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchh
Confidence 0011111223333 3344588888643222 1222211 123678899999999999
Q ss_pred EecCccc
Q 013955 321 LAGHVHA 327 (433)
Q Consensus 321 lsGH~H~ 327 (433)
|+.|.|.
T Consensus 223 fsAHLH~ 229 (456)
T KOG2863|consen 223 FSAHLHV 229 (456)
T ss_pred hhhhHhh
Confidence 9999997
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0003 Score=66.61 Aligned_cols=66 Identities=21% Similarity=0.184 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
++++++||+|.... .+++++++. ..+.|.++++||+++.+.... ...+.+..+ ..+++.++||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~---~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSL---EVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHH---HHHHHHHhc--CCCeEEEecChhH
Confidence 36899999985532 344556554 357899999999998765321 222233322 2468899999998
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0072 Score=50.97 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=39.0
Q ss_pred EEEEEecCCCCCCh--------------HHHHHHhh-cC-CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceec
Q 013955 138 TFAVAGDLGQTGWT--------------KSTLDHIG-QC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (433)
Q Consensus 138 ~f~~~gD~~~~~~~--------------~~~l~~i~-~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v 201 (433)
.+.++||+|.+... ..++.... -. .=|.+.++||++...... .....+++.|...+ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 35678899765321 12333333 23 346888999998654432 22334455554333 779
Q ss_pred cCCCcCC
Q 013955 202 QGNHEKE 208 (433)
Q Consensus 202 ~GNHD~~ 208 (433)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999974
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00044 Score=64.19 Aligned_cols=67 Identities=21% Similarity=0.244 Sum_probs=43.5
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhc----------CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCc
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQ----------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHE 206 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~----------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD 206 (433)
+++++||+|.... .+++++.+.- .+.|.++++||+++.+... ....+.+..+...-.++.+.||||
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l~~~~~~~~v~GNHE 78 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSMVAAGAALCVPGNHD 78 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHHhhCCcEEEEECCcH
Confidence 6899999986532 3455666521 1368999999999866431 222333443333345788999999
Q ss_pred C
Q 013955 207 K 207 (433)
Q Consensus 207 ~ 207 (433)
.
T Consensus 79 ~ 79 (234)
T cd07423 79 N 79 (234)
T ss_pred H
Confidence 7
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00062 Score=59.76 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=28.9
Q ss_pred CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 161 CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 161 ~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.++|.|+++||++........ .+.++.+ ..|++.++||||..
T Consensus 41 ~~~d~vi~~GDl~~~~~~~~~----~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAGTE----LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCCEEEEeCCCCCCCChHHH----HHHHHhC--CCCeEEEeCCCCch
Confidence 378999999999976543211 2222222 26899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0011 Score=62.55 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=41.9
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhc------CCCceEEccccccccccchhhHHHhhhhhhhhhhC---CCceeccCCCcC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQ------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA---RPWMVTQGNHEK 207 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~---iP~~~v~GNHD~ 207 (433)
++.++||+|.... .+.+++.+.. ...+.+|++||+++.+..... ..+.+..+... ..++.+.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~e---Vld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRK---VIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHH---HHHHHHHhhhcccccceEEEecCChH
Confidence 6899999986532 3445555532 235789999999987754222 22223323222 247889999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.00098 Score=62.30 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc---------CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCc
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQ---------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHE 206 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~---------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD 206 (433)
+|+.++||+|.... ..++++++.- ..-|.++++||+++.+.... + ..+.+..+...-.++.+.||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~--~-vl~~~~~~~~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL--R-MIEIVWELVEKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH--H-HHHHHHHHhhCCCEEEEeCccH
Confidence 36899999985422 2344555431 23478999999999765422 1 2222333333357899999999
Q ss_pred C
Q 013955 207 K 207 (433)
Q Consensus 207 ~ 207 (433)
.
T Consensus 78 ~ 78 (245)
T PRK13625 78 N 78 (245)
T ss_pred H
Confidence 6
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0011 Score=60.99 Aligned_cols=67 Identities=21% Similarity=0.225 Sum_probs=42.3
Q ss_pred EEEEecCCCCCC-hHHHHHHhhc--------CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 139 FAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~~-~~~~l~~i~~--------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
+.++||+|.... .+++++++.. ...|.+|++||+++.+.... ...+.+..+...-.++.+.||||..
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCCCEEEEEccCcHH
Confidence 468999986532 3455566532 14689999999998765422 2223333333233688899999973
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.001 Score=61.34 Aligned_cols=167 Identities=21% Similarity=0.272 Sum_probs=96.7
Q ss_pred CCceEEccccccccccch-------hhHHHhh----hhhhhhhhCCCceeccCCCcCCCC--Cc----ccccccccc---
Q 013955 162 KYDVHLLPGDLSYADYMQ-------HRWDTFG----ELVQPLASARPWMVTQGNHEKESI--PL----IMDAFQSYN--- 221 (433)
Q Consensus 162 ~pd~vl~~GD~~~~~~~~-------~~w~~~~----~~~~~l~~~iP~~~v~GNHD~~~~--~~----~~~~~~~y~--- 221 (433)
-|--+|..||++++++.+ .++..|. .-..+....+|+|.-+||||..-. +- .....+.|.
T Consensus 126 ~plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 126 CPLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred CceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 344577788998776541 1121111 111222334999999999999532 10 001111111
Q ss_pred ----cccccCCC-CCCCCCCceEEEEeCeEEEEEEcccCCC-CC-ChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 222 ----ARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYADY-DE-YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 222 ----~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
..|.-|.. ..-......||+++|+++.+-+-....- .. ....+-||+.+|.....+..+ ++++.|.-+-..+
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 11222221 1112335679999999988877653211 11 134578999999987665555 8999998652211
Q ss_pred CC-C---------CC------CChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 295 EA-H---------QG------EGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 295 ~~-~---------~~------~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.. + .+ .....+..|...++.|+|...+.||.|...
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 10 0 01 112467889999999999999999999863
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0045 Score=46.91 Aligned_cols=70 Identities=19% Similarity=0.289 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+|..+++...+.+++.|.|...... ..-.|+|......... .... .......+.|++|+|++.|.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~------~~~~----~~~~~~~~~i~~L~p~t~Y~~ 71 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDW------QEVT----VPGNETSYTITGLQPGTTYEF 71 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEE------EEEE----EETTSSEEEEESCCTTSEEEE
T ss_pred cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceee------eeee----eeeeeeeeeeccCCCCCEEEE
Confidence 5888999988899999999998421 2335666555432200 0111 112233678899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 72 ~v~a 75 (85)
T PF00041_consen 72 RVRA 75 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.01 Score=55.22 Aligned_cols=62 Identities=21% Similarity=0.196 Sum_probs=39.7
Q ss_pred HHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
+-+++.+++.++ +.+.+||+.|-..-... ........+...+.+.++|+|+.||.|..+-..
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 445556665544 37789999997542211 111234556656666799999999999876443
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.013 Score=62.17 Aligned_cols=45 Identities=24% Similarity=0.241 Sum_probs=27.4
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccc
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 328 (433)
+++.+|++.|.......... . . +.....+.+ -+||++|.||+|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~-~-~----en~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQP-G-A----ENSAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCcccc-c-c----chHHHHHhcCCCCCEEEcCCCCcc
Confidence 56789999999764321100 1 1 111112344 38999999999985
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.02 Score=60.99 Aligned_cols=56 Identities=16% Similarity=0.204 Sum_probs=31.1
Q ss_pred HHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccc
Q 013955 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (433)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 328 (433)
+++...+.+.++++.+|++.|............++ .... +.+ -+||++|.||.|..
T Consensus 207 a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 207 ARKYVPEMKEKGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHcCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 44443333333577899999997633211000011 1111 333 37999999999985
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.015 Score=54.04 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=38.4
Q ss_pred HHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 266 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
-+++.+++.+. +.+.+||+.|-..-.... .. .....+..-+.+.++|+|+.||.|..+...
T Consensus 161 ~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~----p~-~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 161 KILADIARARK-KADVVIVSLHWGVEYQYE----PT-DEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHHhc-cCCEEEEEecCccccCCC----CC-HHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 34455555544 578899999986532111 11 233445555555799999999999886544
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0015 Score=60.03 Aligned_cols=66 Identities=23% Similarity=0.174 Sum_probs=41.8
Q ss_pred EEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhh-CCCceeccCCCcCC
Q 013955 140 AVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKE 208 (433)
Q Consensus 140 ~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~-~iP~~~v~GNHD~~ 208 (433)
.++||+|.... ..++++.+....+|.+|++||+++.+.... ...+.+..+.. ..+++.+.||||..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~---~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSV---EVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcH---HHHHHHHHhcCCCCcEEEEccCchhh
Confidence 37899985422 234455555668999999999998764321 22222222211 34789999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0027 Score=59.58 Aligned_cols=64 Identities=22% Similarity=0.151 Sum_probs=42.6
Q ss_pred EEEecCCCCCC-hHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 140 AVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 140 ~~~gD~~~~~~-~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.++||+|.... .+++++++. ..+.|.++++||+++.+.... +..+.+..+. ..+..++||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL---ETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH---HHHHHHHhcC--CCeEEEcCCchHH
Confidence 58999986532 345666665 346899999999998765421 2223333332 3678899999983
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.079 Score=49.63 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=44.9
Q ss_pred HHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeee
Q 013955 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (433)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 332 (433)
+.+.+.+++++.++ +.+++||+.|--.-... ......+.+...+-+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r~-~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREARK-KADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHhc-CCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 45788888888763 67899999998532111 112344556666666899999999999977554
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0043 Score=58.46 Aligned_cols=65 Identities=22% Similarity=0.179 Sum_probs=43.0
Q ss_pred EEEEEecCCCCC-ChHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 138 TFAVAGDLGQTG-WTKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
+..++||+|... ..+++++++. +...|-++++||+++.+....+ ..+.+..+. -.+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLE---VLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHH---HHHHHHhcC--CCeEEEEChhHH
Confidence 467999997543 3456777776 4568999999999987654211 222333322 235679999997
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.02 Score=58.45 Aligned_cols=157 Identities=20% Similarity=0.229 Sum_probs=77.7
Q ss_pred cCCCce-EEccccccccccchhhHHHhhhhhhhhhhCCC-ceeccCCCcCCCCCcccccccccccccccCCC--------
Q 013955 160 QCKYDV-HLLPGDLSYADYMQHRWDTFGELVQPLASARP-WMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-------- 229 (433)
Q Consensus 160 ~~~pd~-vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP-~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~-------- 229 (433)
...+|. ++-+||.-+..+.....+.-......+....| =..++||||.+...-....+..+...|.-|.-
T Consensus 84 ~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l~~~~~yD~l~lGNHEl~~~~ve~l~~~~f~~~~k~~~la~Nv~~~~ 163 (602)
T KOG4419|consen 84 RKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFLFKMMPYDILTLGNHELYQANVENLTEEYFLPAWKGPYLASNVQIFD 163 (602)
T ss_pred ccCCCEEEEecccccCCceeeeccCCchHHHHHHHhcCccchhhhcchhhhhhhhhccchhhhhhhhccceeecceEEec
Confidence 556665 56699998766542211111111122333344 35589999996431110111112233322221
Q ss_pred ---CCCCCCCceEEEE-eCeEEEEEEcccC------CCC------CChHHHHHHHHHhhccccCCCCeEEEEecccccCC
Q 013955 230 ---ESGSNSNLYYSFD-VAGAHLIMLGSYA------DYD------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (433)
Q Consensus 230 ---~~~~~~~~~ys~~-~g~v~fi~lds~~------~~~------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (433)
.-.+....++.|. ..++++..+-.-. ... ..-.|.+|-.+.++.- +.+-+|+++|.|.-..
T Consensus 164 ~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~f~~~~n~~~v~~veei~~~~~~~~m~~~~---~idlii~lgH~~~~~~ 240 (602)
T KOG4419|consen 164 SSNSFVPFGLEYATFLTPHGVVVLAVGFLCASFSGAANRTVVVPVEEITQSEWEQDMVNTT---DIDLIIALGHSPVRDD 240 (602)
T ss_pred CchhhccccccceEEeccCceEEEEEEEeeccccccCCCcccccHHHHhccchHHHHhhcc---CccEEEEecccccccc
Confidence 0112234555554 3344333332211 111 1245678888877764 5667899999985332
Q ss_pred CCCCCCCChhHHH-HHHHHHHHc-CCcE-EEecCcccc
Q 013955 294 NEAHQGEGDGMMA-IMEPLLYAA-SVDL-VLAGHVHAY 328 (433)
Q Consensus 294 ~~~~~~~~~~~~~-~l~~l~~~~-~Vdl-vlsGH~H~y 328 (433)
. .++ .+..+...+ ++++ ||-||.|..
T Consensus 241 ~---------e~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 241 D---------EWKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred h---------hhhhHHHHHhhhCCCCceEEECchhhhh
Confidence 1 222 344444444 5777 999999974
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0086 Score=54.69 Aligned_cols=72 Identities=21% Similarity=0.182 Sum_probs=47.3
Q ss_pred CeEEEEEecCCCCCCh--------------HH---HHH-HhhcCCCceEEccccccccccc--hhhHHHhhhhhhhhhhC
Q 013955 136 PITFAVAGDLGQTGWT--------------KS---TLD-HIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASA 195 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~~--------------~~---~l~-~i~~~~pd~vl~~GD~~~~~~~--~~~w~~~~~~~~~l~~~ 195 (433)
.-+.++++|+|.+... .. .++ -+...+|+-+|++||+-.+-+. ..+|.....+++.+..
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~- 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE- 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-
Confidence 3467899999876421 11 222 2358899999999999876543 3345444444444433
Q ss_pred CCceeccCCCcCC
Q 013955 196 RPWMVTQGNHEKE 208 (433)
Q Consensus 196 iP~~~v~GNHD~~ 208 (433)
.-|+.+.||||-.
T Consensus 98 ~evi~i~GNHD~~ 110 (235)
T COG1407 98 REVIIIRGNHDNG 110 (235)
T ss_pred CcEEEEeccCCCc
Confidence 2599999999984
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.013 Score=58.89 Aligned_cols=45 Identities=24% Similarity=0.118 Sum_probs=34.4
Q ss_pred CCCeEEEEEecCCCCCC-------------hHHHHHHhhcCCCceEEccccccccccc
Q 013955 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQCKYDVHLLPGDLSYADYM 178 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~ 178 (433)
...+||++..|.|.+.. +..++.-+.+.+.|+||..||++..+.+
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 56799999999987642 1234444458899999999999987665
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.36 Score=40.51 Aligned_cols=84 Identities=21% Similarity=0.255 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCC-CCCCcccccCCCCCCCcceeEeccccEEEEEE
Q 013955 306 AIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDG-GNKEGLARKYKNPQPDWSVFREASFGHGELKI 384 (433)
Q Consensus 306 ~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~g-G~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v 384 (433)
+.|.-|-++..||+.++||+|.++... -+|-.||.-|++ |+.. ..+..+ ....|..+++
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaTGAfn-----~~~t~~-------~~PSFvLmDi 156 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSATGAFN-----VSDTDI-------IVPSFVLMDI 156 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcccCCCc-----ccccCC-------CCCceEEEEe
Confidence 466666778899999999999998776 358888988876 3321 111111 3567899998
Q ss_pred EcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 385 VNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 385 ~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
...+-+++- ++.-||+. -+|.....
T Consensus 157 qg~~~v~Yv-Y~lidgeV-kVdki~yk 181 (183)
T KOG3325|consen 157 QGSTVVTYV-YRLIDGEV-KVDKIEYK 181 (183)
T ss_pred cCCEEEEEE-eeeeCCcE-EEEEEEec
Confidence 655433333 34456762 25554443
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.025 Score=54.53 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCC--CceeccCCCcCC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~i--P~~~v~GNHD~~ 208 (433)
+++++||+|.... ..++++.......+-++++||+++.+...- +.+ ..+..+.-.. -++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~--Evi-~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECV-LYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChH--HHH-HHHHHHHhhcCCCEEEEeCCCcHH
Confidence 5889999985422 233444444445688999999998765321 221 1222222223 478899999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.031 Score=52.96 Aligned_cols=69 Identities=19% Similarity=0.121 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
-+++++||+|... ...++++.+.....+-++++||+++.+.... +. ...+..+.- .--++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~--e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSI--EV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChH--HH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 3589999998542 2234455555566788999999998765421 11 112222211 13478899999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.17 Score=53.65 Aligned_cols=77 Identities=22% Similarity=0.387 Sum_probs=50.1
Q ss_pred EEEEecCCCcEEEEEEcCCCCCCcEEE----EeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 46 VHISLAGDSHMRVTWITDDESSPSVVE----YGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
+++.-.+.++++++|.-++.+....+. |-++..+ + .+|... ......|+|+||+|||.|-+||..
T Consensus 449 ~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~-------e-~~~~~~---~t~~~~~ti~gL~p~t~YvfqVRa 517 (996)
T KOG0196|consen 449 LRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED-------E-RSYSTL---KTKTTTATITGLKPGTVYVFQVRA 517 (996)
T ss_pred EEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc-------c-cceeEE---ecccceEEeeccCCCcEEEEEEEE
Confidence 555555689999999998766544444 4444211 1 112111 123456889999999999999964
Q ss_pred --------cCCeeEEECCCC
Q 013955 122 --------QGPEFEFKTPPA 133 (433)
Q Consensus 122 --------~s~~~~F~T~p~ 133 (433)
-|....|.|.+.
T Consensus 518 rT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 518 RTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ecccCCCCCCCceeeeecCc
Confidence 256778888764
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.045 Score=52.21 Aligned_cols=68 Identities=22% Similarity=0.165 Sum_probs=40.8
Q ss_pred EEEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
.+.++||+|... ....+++.......+-+|++||+++.+.... +. ...+..+.- .-.++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 478999998542 2233444444445678999999998765421 11 112222221 23588999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.047 Score=52.31 Aligned_cols=68 Identities=18% Similarity=0.136 Sum_probs=41.0
Q ss_pred EEEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCC--CceeccCCCcCC
Q 013955 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~i--P~~~v~GNHD~~ 208 (433)
.++++||+|... ...++++.......+-+|++||+++.+.... +.+ ..+..+.-.. -++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH--HHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 488999998542 2233455444455678999999998765421 211 1111221112 378899999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.065 Score=51.52 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=40.0
Q ss_pred EEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCC--CceeccCCCcCC
Q 013955 139 FAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~i--P~~~v~GNHD~~ 208 (433)
+.++||+|... ...++++.+.....+-++++||+++.+.... +.+ ..+..+.-.. -++.+.||||..
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl-~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV--ETM-EYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH--HHH-HHHHHhhhcCCCcEEEEecccchH
Confidence 78999998542 2233444444445677999999998765421 111 1111221122 378899999974
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.13 Score=49.86 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCCC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKES 209 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~~ 209 (433)
++.++||+|.... ...+++..... .-+.+|++||+++.+... .+.+ .++-.+... --++.+.||||...
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s--~Evl-~ll~~lk~~~p~~v~llRGNHE~~~ 124 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRS--IEIL-IILFAFFLVYPNEVHLNRGNHEDHI 124 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCc--HHHH-HHHHHHhhcCCCcEEEecCchhhhh
Confidence 6799999985522 12233332222 236799999999977542 2222 112122111 23788999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.088 Score=51.96 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=39.5
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCC-ceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
-++.++||+|.... ...+++.+..... +.+|++||+++.+... -+.+ ..+..+.-. --++.+.||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~S--lEvl-~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWG--LETF-LLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCCh--HHHH-HHHHHHhhccCCeEEEEeeecccc
Confidence 36899999986532 1233333322223 4599999999876532 1221 122222212 2478899999985
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.056 Score=51.76 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=40.0
Q ss_pred EEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhh-hhhhhCCCceeccCCCcCC
Q 013955 139 FAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~-~~l~~~iP~~~v~GNHD~~ 208 (433)
+.++||+|... ...++++.+.....+-++++||+++.+.... +.+...+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV--ETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH--HHHHHHHHHhhccCCeEEEEecccchH
Confidence 68899998542 2233455554445557889999998765321 2211111 0111223588999999974
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.07 Score=51.61 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=40.5
Q ss_pred EEEEEecCCCCC-ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.++++||+|... ...++++.......+-+|++||+++.+... .+.+ ..+..+.-. --++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s--~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQS--LETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCc--HHHH-HHHHHhcccCCCceEEEecccchh
Confidence 488999998542 223344444444556789999999876531 1221 111122111 2478899999984
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.41 E-value=3.4 Score=38.57 Aligned_cols=69 Identities=20% Similarity=0.176 Sum_probs=42.9
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
..-.||+.++|+|...... . .-..-|+++++||.+.-+.. .+-..|.+.+..+.-.. =+++.||||..-
T Consensus 59 ~~~~r~VcisdtH~~~~~i---~--~~p~gDvlihagdfT~~g~~-~ev~~fn~~~gslph~y-KIVIaGNHELtF 127 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDI---N--DIPDGDVLIHAGDFTNLGLP-EEVIKFNEWLGSLPHEY-KIVIAGNHELTF 127 (305)
T ss_pred CCceEEEEecCcccccCcc---c--cCCCCceEEeccCCccccCH-HHHHhhhHHhccCccee-eEEEeeccceee
Confidence 5668999999998643221 1 24577899999999875443 22234444333332222 256899999953
|
|
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=92.04 E-value=1.3 Score=31.75 Aligned_cols=71 Identities=11% Similarity=0.189 Sum_probs=39.9
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
|..+++.....+++.|+|....... ...++|........ .... .. ......+...+.+|+|++.|.++|.
T Consensus 4 p~~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~--~~----~~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 4 PSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWK--EV----NVTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred CCcEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccE--EE----EecCCccEEEEeCcCCCCEEEEEEE
Confidence 3336666556669999998553221 23455554432111 0000 00 0111156788999999999999985
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 3
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.19 Score=45.62 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=53.7
Q ss_pred EEEEecCCCCCCh------HHHHHHhh-cCCCceEEccccccccccchh---------hH-H----HhhhhhhhhhhCCC
Q 013955 139 FAVAGDLGQTGWT------KSTLDHIG-QCKYDVHLLPGDLSYADYMQH---------RW-D----TFGELVQPLASARP 197 (433)
Q Consensus 139 f~~~gD~~~~~~~------~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~---------~w-~----~~~~~~~~l~~~iP 197 (433)
|++++|.+..... .+.++.+. ..+|+.+|++|++++...... .. . .+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998776332 23334445 778999999999998543210 11 1 11223334445689
Q ss_pred ceeccCCCcCCCCCcc-ccccccc-ccccccCCCCCCCCCCceEEEEeCeEEEEEEcc
Q 013955 198 WMVTQGNHEKESIPLI-MDAFQSY-NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~-~~~~~~y-~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds 253 (433)
++.+||+||....+.. +..+... ..... ....-..-..-+.+.+++..|.+...
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~--~~~~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLK--KYSNIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHC--TTTTEEE--CSEEEEETTEEEEE-SS
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhh--hcCceEEeCCCeEEEEeCCcEEEECC
Confidence 9999999998654111 1111100 00000 00000001234678889999888765
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.22 Score=48.25 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCCcEEEecCc
Q 013955 305 MAIMEPLLYAASVDLVLAGHV 325 (433)
Q Consensus 305 ~~~l~~l~~~~~VdlvlsGH~ 325 (433)
.+.+...+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 578899999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.31 Score=47.21 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=38.6
Q ss_pred eEEEEEecCCCCC-ChHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhh--hCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTG-WTKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~--~~iP~~~v~GNHD~~ 208 (433)
-++.++||+|... ...++++.+.- ..-|-+|++||+++.+... -+.+. .+-.+. ..--++.+.||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S--~Evl~-ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFS--VEVIL-TLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCCh--HHHHH-HHHHhhhccCCceEEEeeccchH
Confidence 4689999998542 12223333321 1235799999999876542 12211 111121 112367899999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.56 Score=51.99 Aligned_cols=85 Identities=19% Similarity=0.316 Sum_probs=54.3
Q ss_pred CCCCCCCCCceEEEEecCCCcEEEEEEcCCCCCC------cEEEEeccCCCCC--e-eEEeeeeEEeeeeeecCeEEEEE
Q 013955 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDESSP------SVVEYGTSPGGYN--C-GAEGESTSYRYLFYRSGKIHHTV 105 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~------~~v~y~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~v~ 105 (433)
.+..++..|+.|.|....+++++|.|..+..... -.++|+..+.... . .+.+ ...+-.
T Consensus 611 lsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-------------n~~~~l 677 (1381)
T KOG4221|consen 611 LSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-------------NTTQYL 677 (1381)
T ss_pred ccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-------------chhhhH
Confidence 4456777777799998889999999998864321 1334443332211 1 1111 112224
Q ss_pred eCCCCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 106 IGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 106 l~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+++|+|+|.|.+||.. .|++..+.|+-
T Consensus 678 ~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 678 FNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred hhcCCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 6789999999999953 36778888854
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=88.91 E-value=2.2 Score=31.44 Aligned_cols=70 Identities=16% Similarity=0.291 Sum_probs=39.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+.+.....+++.|.|....... .-.|+|..... .... ... ........+.+.+|.|++.|.+
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~-~~~~------~~~---~~~~~~~~~~i~~l~p~~~Y~~ 72 (93)
T cd00063 3 PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGS-GDWK------EVE---VTPGSETSYTLTGLKPGTEYEF 72 (93)
T ss_pred CCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCC-CCCE------Eee---ccCCcccEEEEccccCCCEEEE
Confidence 34445555555789999998774321 12233332210 0000 000 1112456678899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 73 ~v~a 76 (93)
T cd00063 73 RVRA 76 (93)
T ss_pred EEEE
Confidence 9854
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=88.39 E-value=1.6 Score=48.17 Aligned_cols=83 Identities=16% Similarity=0.204 Sum_probs=56.6
Q ss_pred CcccCCCCCCCCCCceEEEEecCCCcEEEEEEcCC----CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEE
Q 013955 30 TLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDD----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTV 105 (433)
Q Consensus 30 ~~~~~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 105 (433)
++...-+-.+..+|..+.+.-.+.++|.|.|.... ......|+|....+.. +..... ...+..-.++
T Consensus 810 ~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~-----~~~~~~----~i~~~~~~~~ 880 (1051)
T KOG3513|consen 810 TVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE-----GSLSRV----QIAGNRTSWR 880 (1051)
T ss_pred EEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCc-----ccccce----eecCCcceEe
Confidence 34444556788899999888777999999995442 2345678888775443 111010 1224556688
Q ss_pred eCCCCCCCEEEEEecc
Q 013955 106 IGPLEHDTVYFYRCGR 121 (433)
Q Consensus 106 l~~L~p~t~Y~Y~v~~ 121 (433)
|+||+|+|.|++.|..
T Consensus 881 ltgL~~~T~Y~~~vrA 896 (1051)
T KOG3513|consen 881 LTGLEPNTKYRFYVRA 896 (1051)
T ss_pred eeCCCCCceEEEEEEE
Confidence 9999999999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 433 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 8e-80 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 3e-78 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 3e-78 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 3e-78 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 433 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-138 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-137 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 3e-37 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 9e-37 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 7e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 7e-10 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 8e-10 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 3e-08 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 5e-06 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 401 bits (1030), Expect = e-138
Identities = 168/409 (41%), Positives = 220/409 (53%), Gaps = 28/409 (6%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGDS--HMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPPA---QFPITFAV 141
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP P TF +
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGL 124
Query: 142 AGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASA 195
GDLGQ+ + +TL H K L GDLSYAD RWDT+G + +
Sbjct: 125 IGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY 184
Query: 196 RPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH+I+L S
Sbjct: 185 QPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSS 244
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
Y+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M E
Sbjct: 245 YSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFV 304
Query: 314 AASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKY 362
VD+V AGHVHAYERS RV+N D VYITIGD GN +
Sbjct: 305 KYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNM 364
Query: 363 KNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411
PQP++S FREASFGHG I N THA +SW+RN D V +D +W
Sbjct: 365 IQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 413
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 398 bits (1024), Expect = e-137
Identities = 172/419 (41%), Positives = 229/419 (54%), Gaps = 33/419 (7%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWITD-DESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA-- 133
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPG 122
Query: 134 -QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVHLLPGDLSYADYM----QHRWDTFG 186
P F + GD+GQT + +TL H Q K L GDLSY++ +RWDT+G
Sbjct: 123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWG 182
Query: 187 ELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVA 244
+ + +PW+ T GNHE + P I + F + R+ P E SGS L+Y+ A
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 245 GAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGM 304
AH+I+L SY+ + +YS QY+W +L KV+R +TPWL+VL+H P YNS EAH EG+ M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 305 MAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD-----------PCGAVYITIGDGG 353
AI EP VD+V +GHVH+YERS RV+N + VYITIGDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 354 NKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS 412
N EGLA + PQP +S FREASFGHG I N THA +SWHRN D V +D LW+ +
Sbjct: 363 NSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLN 421
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 137 bits (345), Expect = 3e-37
Identities = 50/269 (18%), Positives = 78/269 (28%), Gaps = 44/269 (16%)
Query: 136 PITFAVAGDLGQTGWTKSTLDH-----------IGQCKYDVHLLPGDLSYADYM----QH 180
+ F GD G + D L GD Y +
Sbjct: 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 65
Query: 181 RWDTFGELV--QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
R+ E V P PW V GNH+ A+ + RW P
Sbjct: 66 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 125
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 126 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVL 182
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343
V H P ++ A G ++ + PLL V L GH H + D G
Sbjct: 183 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL-------QDENG 233
Query: 344 AVYITIGDGGNKEGLARKYKNPQPDWSVF 372
++ G G + + + + F
Sbjct: 234 LGFVLSGAGNFMDPSKKHLRKVPNGYLRF 262
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 9e-37
Identities = 53/315 (16%), Positives = 93/315 (29%), Gaps = 61/315 (19%)
Query: 134 QFPITFAVAGDLG-----QTGWTKSTLDHIGQCKYDVHLLPGDLSY---ADYMQHRWDTF 185
+ + FA GD G Q K I + + PG W
Sbjct: 1 KCQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNL 60
Query: 186 GELV---QPLASARPWMVTQGNHE-------------------KESIPLIMDAFQSYNAR 223
E V + P+ G + + DA + +
Sbjct: 61 YEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPK 120
Query: 224 WKMP---------FEESGSNSNLYYSFDVAGAHLIML------GSYADYDEYSDQYRWLK 268
W MP F S S + A I + ++ + + LK
Sbjct: 121 WIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLK 180
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328
LS K +++V+ P Y+S + + + PLL A VDL ++GH +
Sbjct: 181 SQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNM 237
Query: 329 ERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNST 388
E + +IT G G +G + S+F + G + +++
Sbjct: 238 EVI--------EDNDMAHITCGSGSMSQG----KSGMKNSKSLFFSSDIGFCVHE-LSNN 284
Query: 389 HAFWSWHRNDDDEPV 403
+ + E +
Sbjct: 285 GIVTKFVSSKKGEVI 299
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 7e-11
Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 30/185 (16%)
Query: 154 TLDHIGQCKYDVHLL--PGDLSYADYMQHRWDTFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ R + + Q L S P + GNH+
Sbjct: 31 VVSQLNALRERPDAVVVSGDIV----NCGRPEEYQVARQILGSLNYPLYLIPGNHD--DK 84
Query: 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY---ADYDEYSD-QYRW 266
L ++ Q + +N+ + D L+ + S +D W
Sbjct: 85 ALFLEYLQPL------CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISW 138
Query: 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM-----AIMEPLLYAASVDLVL 321
L+ L + K + +H P A D + ++ + S+ +
Sbjct: 139 LEAQLFEGGDKPA---TIFMHHPPLPLGNAQ---MDPIACENGHRLLALVERFPSLTRIF 192
Query: 322 AGHVH 326
GH H
Sbjct: 193 CGHNH 197
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 7e-10
Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 31/185 (16%)
Query: 154 TLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKES 209
L+ + Q + D + GDL+ + LV+P A+ + GNH
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH---- 110
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY----SDQYR 265
D +E+ S + L + G +I+L + + + Q
Sbjct: 111 -----DDRAELRKFL---LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162
Query: 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM----AIMEPLLYAASVDLVL 321
WL ++L+ T ++ LH P S + A + +L V +L
Sbjct: 163 WLAEELATPAPDGT---ILALHHPPIPSVLDM---AVTVELRDQAALGRVLRGTDVRAIL 216
Query: 322 AGHVH 326
AGH+H
Sbjct: 217 AGHLH 221
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 8e-10
Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 31/202 (15%)
Query: 155 LDHIGQCKYDVHLLPGDLSY-ADYMQHRWDTFGELVQPLASAR-PWMVTQGNHE------ 206
L + K DV ++ GDL+ + H + + + V GNH+
Sbjct: 85 LADVESKKTDVLIISGDLTNNGEKTSHEE--LAKKLTQVEKNGTQVFVVPGNHDINNPWA 142
Query: 207 ----KESIPLIMDAFQSYNARWKMPF-----EESGSNSNLYYSFDVAGAHLIMLGSYADY 257
K+ + ++ F S S Y + + L+ML +
Sbjct: 143 RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYK 202
Query: 258 DEYS------------DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305
W+K+ + + + VL H +++ +G
Sbjct: 203 TNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYN 262
Query: 306 AIMEPLLYAASVDLVLAGHVHA 327
+ L ++D L+GH+H
Sbjct: 263 QQVIDALTEGAMDFSLSGHIHT 284
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 54.2 bits (129), Expect = 3e-08
Identities = 36/250 (14%), Positives = 65/250 (26%), Gaps = 61/250 (24%)
Query: 154 TLDHIGQCKYDVHLLPGDLSYADYMQHRWD--TFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ + ++ L + GNHE +
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNF 102
Query: 211 P---LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVA-GAHLIMLGSYADYDEYSD---- 262
L+ S + + Y F A ++L +Y +
Sbjct: 103 SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 162
Query: 263 ------------------------------------------QYRWLKDDLSKVDRKKTP 280
Q +WL L+ D K+
Sbjct: 163 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQER 222
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD 340
L + H+P + A++ L SV +AGH H R +
Sbjct: 223 VL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS----- 276
Query: 341 PCGAVYITIG 350
GA +IT+
Sbjct: 277 --GAQHITLE 284
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 5e-06
Identities = 30/226 (13%), Positives = 57/226 (25%), Gaps = 13/226 (5%)
Query: 141 VAGDL-GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
+ G + + D L G+L + F ++ P
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTA 67
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKM-PFEESGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G + + +A +M E+ + Y G + G +++
Sbjct: 68 YVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHE 127
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVD 318
+ L + K + L H Y+ QG + L+ +
Sbjct: 128 ALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPL 182
Query: 319 LVLAGHVH----AYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
LVL S V G + + + G R
Sbjct: 183 LVLVAGKGQKHEMLGASWVVVPGDLSEGEYSLLDLRARKLETGNVR 228
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 2e-04
Identities = 28/229 (12%), Positives = 74/229 (32%), Gaps = 25/229 (10%)
Query: 141 VAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWM 199
V G++ + + + + + P + + +T + + +
Sbjct: 38 VVGNILKNEALEKEYERAHLARRE----PNRKVIHENEHYIIETLDKFFREIGELGVKTF 93
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE 259
V G ++ + A+++ A + + ++ +I G E
Sbjct: 94 VVPGKNDAPLKIFLRAAYEAETAY------PNIRVLHEGFAGWRGEFEVIGFGGLLTEHE 147
Query: 260 YSDQY-----RWLKDDLSKVDRKKTPWLLVLL-HVPWYNSNEAHQGEGD---GMMAIMEP 310
+ + + RW + + K + P LV + + P E G +
Sbjct: 148 FEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNT- 206
Query: 311 LLYAASVDLVLAGHVHA----YERSIRVNNGKPDPCGAVYITIGDGGNK 355
++ + + ++ + GHV +I VN G+ + ++ + K
Sbjct: 207 IIKSLNPEVAIVGHVGKGHELVGNTIVVNPGEFEEGRYAFLDLTQHKIK 255
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 100.0 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.9 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.84 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.65 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.61 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.58 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.48 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.47 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.43 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.43 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.39 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.38 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.38 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.36 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.24 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.2 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.18 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.17 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.15 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.15 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.12 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.11 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.87 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.76 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.75 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.67 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.54 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.51 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.5 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.47 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.43 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.36 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.31 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.26 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.22 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.12 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.84 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.71 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.56 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.48 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.44 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.31 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.3 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.3 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.28 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.23 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 97.12 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.11 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.08 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.08 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.03 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 97.01 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.01 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 97.0 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 97.0 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.99 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.94 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.91 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.9 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.9 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.88 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.86 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.81 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.77 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.77 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.77 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.76 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.73 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.69 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.65 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.63 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.6 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.59 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.58 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.57 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.57 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.56 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 96.55 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 96.54 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.53 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.53 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.5 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.5 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.46 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.45 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.41 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.4 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.39 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.38 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.37 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 96.34 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 96.34 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.33 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.3 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.3 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.28 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 96.24 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 96.22 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.2 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.12 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.09 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.07 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.03 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 96.02 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.02 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.01 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.97 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.92 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.85 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.83 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.78 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.77 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.77 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.75 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 95.74 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.73 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 95.71 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.7 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.69 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 95.64 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.54 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.53 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.51 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 95.46 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 95.37 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.34 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.28 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.24 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.24 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 95.24 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 95.21 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.2 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.12 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.11 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 95.11 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 95.07 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.96 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.93 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 94.89 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 94.84 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.76 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.74 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.66 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.63 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.63 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.63 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.61 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.41 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.35 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.3 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.16 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.14 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.13 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 94.09 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.09 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 93.73 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 93.46 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.1 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.09 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 93.06 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 92.62 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.22 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 92.15 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 92.08 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.93 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 91.78 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 91.39 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 90.73 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 90.66 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 89.53 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 89.37 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 89.24 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 89.2 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 88.94 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 88.92 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 88.8 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 87.76 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 87.7 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 87.51 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 86.97 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 86.39 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 85.9 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 85.13 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 84.74 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 84.4 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 84.33 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 83.73 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 83.68 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 82.59 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 80.53 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 80.01 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-66 Score=523.90 Aligned_cols=376 Identities=45% Similarity=0.776 Sum_probs=320.9
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcC-CCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 38 KPSSHPQQVHISLAG--DSHMRVTWITD-DESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~~~~i~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
.+...|+||||++++ .++|+|+|+|. ..++.+.|+|++.++.+...+.++.++|.+....++++|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 456789999999988 59999999999 777888999999987777778777666665445788999999999999999
Q ss_pred EEEEecc--cCCeeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCceEEccccccccccc----hhhHH
Q 013955 115 YFYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWD 183 (433)
Q Consensus 115 Y~Y~v~~--~s~~~~F~T~p~---~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~~~~~~----~~~w~ 183 (433)
|+|||+. .|+.++|+|+|. ..++||+++||+|.......+++++.+. +|||||++||++|.++. ...|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 578999999885 5789999999998765456678888755 99999999999997654 45788
Q ss_pred HhhhhhhhhhhCCCceeccCCCcCCCCCc--ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCCh
Q 013955 184 TFGELVQPLASARPWMVTQGNHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261 (433)
Q Consensus 184 ~~~~~~~~l~~~iP~~~v~GNHD~~~~~~--~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~ 261 (433)
.|.+.++++...+|+++++||||+...+. ....+..|..+|.+|.+..+..++.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 88888888887899999999999975321 1134566788888887554455678999999999999999988777789
Q ss_pred HHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCc---
Q 013955 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--- 338 (433)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~--- 338 (433)
+|++||+++|+++++++++|+||++|+|+++....+.++...+++.|+++|++++|+++|+||+|.|+|..|+++++
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~ 339 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc
Confidence 99999999999986557889999999999987654445556689999999999999999999999999999987765
Q ss_pred --------cCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEE
Q 013955 339 --------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410 (433)
Q Consensus 339 --------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i 410 (433)
.+++|++||++|+||+.+++...+..++|+|++|+...+||++|++.+++++.|+|++++||++.|.|+|||
T Consensus 340 ~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i 419 (426)
T 1xzw_A 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWL 419 (426)
T ss_dssp TTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEE
T ss_pred cCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEE
Confidence 246899999999999987764467678899999999999999999999999999999999999889999999
Q ss_pred EeC
Q 013955 411 TSL 413 (433)
Q Consensus 411 ~~~ 413 (433)
.|+
T Consensus 420 ~~~ 422 (426)
T 1xzw_A 420 LNR 422 (426)
T ss_dssp ECS
T ss_pred Eec
Confidence 997
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-64 Score=507.64 Aligned_cols=381 Identities=44% Similarity=0.735 Sum_probs=316.1
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.+...|+||||++++ +++|+|+|.|...++.+.|+|++.++.+...+.|+.++|.+....++++|+|+|+||+|||+|
T Consensus 14 ~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 93 (424)
T 2qfp_A 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (424)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEE
Confidence 344689999999987 589999999987677889999999877777777776655543356789999999999999999
Q ss_pred EEEecc--cCCeeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCceEEccccccccccc----hhhHHH
Q 013955 116 FYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWDT 184 (433)
Q Consensus 116 ~Y~v~~--~s~~~~F~T~p~---~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~~~~~~----~~~w~~ 184 (433)
+|||+. .|+.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.
T Consensus 94 ~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 94 YYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp EEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred EEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 999986 478999999885 4689999999998764444567777654 89999999999997653 357888
Q ss_pred hhhhhhhhhhCCCceeccCCCcCCCCCcc--cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChH
Q 013955 185 FGELVQPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262 (433)
Q Consensus 185 ~~~~~~~l~~~iP~~~v~GNHD~~~~~~~--~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~ 262 (433)
|.+.++++...+|+++++||||+...+.. ...+..|..+|.+|........+.||+|++|+++||+||+...++...+
T Consensus 174 ~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~ 253 (424)
T 2qfp_A 174 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 253 (424)
T ss_dssp HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred HHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHH
Confidence 88888888878999999999999643211 1245667788888865444456789999999999999999877666689
Q ss_pred HHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCc----
Q 013955 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK---- 338 (433)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~---- 338 (433)
|++||+++|+++++++++|+||++|+|+++....+..+...+++.|+++|++++|+++|+||+|.|+|..|+++..
T Consensus 254 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 333 (424)
T 2qfp_A 254 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 333 (424)
T ss_dssp HHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceecc
Confidence 9999999999986656789999999999987544434455678999999999999999999999999999876532
Q ss_pred -------cCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 339 -------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 339 -------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
.+++|++||++|+||+.+++...+..++|+|++|+...|||++|++.+++++.|+|+++.||+..+.|+|||.
T Consensus 334 ~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~ 413 (424)
T 2qfp_A 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 413 (424)
T ss_dssp SCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEE
T ss_pred CCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEE
Confidence 2467999999999999887654576788999999999999999999999999999999889986668999999
Q ss_pred eCCC-CCC
Q 013955 412 SLVS-SGC 418 (433)
Q Consensus 412 ~~~~-~~~ 418 (433)
|+.. +.|
T Consensus 414 ~~~~~~~~ 421 (424)
T 2qfp_A 414 NRHWYPVD 421 (424)
T ss_dssp CTTTCCCC
T ss_pred eccccccc
Confidence 9964 544
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=298.06 Aligned_cols=252 Identities=17% Similarity=0.215 Sum_probs=187.3
Q ss_pred CCeEEEEEecCCCCCChHHHH-----HHhhcCCCceEEccccccccccc---hhhHHH-hhhhhhhh--hhCCCceeccC
Q 013955 135 FPITFAVAGDLGQTGWTKSTL-----DHIGQCKYDVHLLPGDLSYADYM---QHRWDT-FGELVQPL--ASARPWMVTQG 203 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~l-----~~i~~~~pd~vl~~GD~~~~~~~---~~~w~~-~~~~~~~l--~~~iP~~~v~G 203 (433)
.++||+++||+|.+...+..+ +.+++.+|||||++||++|.+.. ...|.. |.+....+ ...+||++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 579999999999765444322 22347899999999999998431 345653 33444433 34599999999
Q ss_pred CCcCCCCCcccccc-------------------cccccccccCCCCCCCCCCceEEE----Ee---------C----eEE
Q 013955 204 NHEKESIPLIMDAF-------------------QSYNARWKMPFEESGSNSNLYYSF----DV---------A----GAH 247 (433)
Q Consensus 204 NHD~~~~~~~~~~~-------------------~~y~~~~~~p~~~~~~~~~~~ys~----~~---------g----~v~ 247 (433)
|||+.+...++..+ .....+|.||. .||++ .. | .++
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v~ 153 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAAA 153 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEEE
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceEE
Confidence 99998754432222 12456788884 67765 32 3 499
Q ss_pred EEEEcccCCCC----------CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCC
Q 013955 248 LIMLGSYADYD----------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASV 317 (433)
Q Consensus 248 fi~lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~V 317 (433)
||+|||..... ...+|++||+++|+. ++|+||++|||+++... .+....+++.|+++|++++|
T Consensus 154 fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~--~~~~~~l~~~l~~ll~~~~V 226 (342)
T 3tgh_A 154 FIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY--SRGSSYLAYYLLPLLKDAEV 226 (342)
T ss_dssp EEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST--TCCCHHHHHHTHHHHHHTTC
T ss_pred EEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC--CCCcHHHHHHHHHHHHHcCC
Confidence 99999964321 125899999999943 47999999999998764 23344678999999999999
Q ss_pred cEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEe
Q 013955 318 DLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRN 397 (433)
Q Consensus 318 dlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~ 397 (433)
+++|+||+|.|+|..+ +|+.||++|+||...+. .. ..++|+.|+...+||.++++. ++.++++|+++
T Consensus 227 dlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v~-~~~l~~~~~~~ 293 (342)
T 3tgh_A 227 DLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHELS-NNGIVTKFVSS 293 (342)
T ss_dssp CEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEEE-TTEEEEEEEET
T ss_pred CEEEECCCcceeEEee--------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEEE-CCEEEEEEEEC
Confidence 9999999999999974 47999999998875431 11 235688898889999999995 56899999985
Q ss_pred CCCCCeeeeEEEEEeCCCC
Q 013955 398 DDDEPVRSDQLWITSLVSS 416 (433)
Q Consensus 398 ~~g~~~v~d~f~i~~~~~~ 416 (433)
.+|+ |+|+|+|.|....
T Consensus 294 ~~G~--vld~~~i~k~~~~ 310 (342)
T 3tgh_A 294 KKGE--VIYTHKLNIKKKK 310 (342)
T ss_dssp TTTE--EEEEEEEECCCCS
T ss_pred CCCc--EEEEEEEECCCCc
Confidence 5775 9999999998544
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=302.57 Aligned_cols=354 Identities=19% Similarity=0.225 Sum_probs=231.0
Q ss_pred EEecC--CCcEEEEEEcCCCC---------CCcEEEEeccCCC--CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 48 ISLAG--DSHMRVTWITDDES---------SPSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 48 l~~~~--~~~~~i~W~t~~~~---------~~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
++.+. ++++ |.|...... ....|+|....+. ......|.... ....+++|+|.|+||+|||.
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a----~~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMA----KPSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEE----CGGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEe----cCCCceEEEeecCCcCCCCE
Confidence 34444 5666 678876321 2346666655433 23445554322 13578999999999999999
Q ss_pred EEEEecc---cCCeeEEECCCC----CCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchh-------
Q 013955 115 YFYRCGR---QGPEFEFKTPPA----QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH------- 180 (433)
Q Consensus 115 Y~Y~v~~---~s~~~~F~T~p~----~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~------- 180 (433)
|+||++. .|.+++|+|+|. ..+++|+++||.+.......+++.+.+.+|||+|++||++|.++...
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~ 167 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGN 167 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCC
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccc
Confidence 9999975 378999999986 26899999999876433346788888889999999999999875321
Q ss_pred ----------hHHHhh---------hhhhhhhhCCCceeccCCCcCCCCCccc--c------cc-----ccccccc-ccC
Q 013955 181 ----------RWDTFG---------ELVQPLASARPWMVTQGNHEKESIPLIM--D------AF-----QSYNARW-KMP 227 (433)
Q Consensus 181 ----------~w~~~~---------~~~~~l~~~iP~~~v~GNHD~~~~~~~~--~------~~-----~~y~~~~-~~p 227 (433)
.++.|. ..++.+.+.+|++.++||||+.++.... . .| ..+..+| .+|
T Consensus 168 ~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P 247 (527)
T 2yeq_A 168 VRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMP 247 (527)
T ss_dssp CSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred cccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCC
Confidence 111211 1245566779999999999997542110 0 00 1222233 344
Q ss_pred CCC----CCCCCCceEEEEeCe-EEEEEEcccCCCC----------------------CChHHHHHHHHHhhccccCCCC
Q 013955 228 FEE----SGSNSNLYYSFDVAG-AHLIMLGSYADYD----------------------EYSDQYRWLKDDLSKVDRKKTP 280 (433)
Q Consensus 228 ~~~----~~~~~~~~ys~~~g~-v~fi~lds~~~~~----------------------~~~~Q~~WL~~~L~~~~~~~~~ 280 (433)
... .+.....||+|++|+ ++|++||+..... .+.+|++||+++|+++ +++
T Consensus 248 ~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---~a~ 324 (527)
T 2yeq_A 248 LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAH 324 (527)
T ss_dssp CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---CSS
T ss_pred CCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---CCC
Confidence 321 122347899999999 9999999964211 3589999999999986 578
Q ss_pred eEEEEecccccCCCCCC--------C--CCChhHHHHHHHHHHHcCCc--EEEecCcccceeeeeccCCccCCC----cc
Q 013955 281 WLLVLLHVPWYNSNEAH--------Q--GEGDGMMAIMEPLLYAASVD--LVLAGHVHAYERSIRVNNGKPDPC----GA 344 (433)
Q Consensus 281 ~~iv~~H~P~~~~~~~~--------~--~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~r~~~~~~~~~~~~----g~ 344 (433)
|+||+.|+|++...... . ..-...|+.|+++|.+++|+ ++|+||+|.+++....... .+++ ++
T Consensus 325 W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~-~~p~~~~~~~ 403 (527)
T 2yeq_A 325 WNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF-EKTSSKIFGA 403 (527)
T ss_dssp EEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST-TCTTSCEEEE
T ss_pred eEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc-cCCCCCceEE
Confidence 99999999998754211 0 01125789999999999985 9999999999998643221 1222 44
Q ss_pred EEEEECC--CCCCCccc---ccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCC-----CCCeeeeEEEEEe
Q 013955 345 VYITIGD--GGNKEGLA---RKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDD-----DEPVRSDQLWITS 412 (433)
Q Consensus 345 ~yi~~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~-----g~~~v~d~f~i~~ 412 (433)
-+++++- ||...... ..+...+|. ..|.+...||.+|+|. .+.++.+|+..++ +.....-+|++..
T Consensus 404 ef~~ssi~s~~~g~~~~~~~~~~~~~np~-~~~~~~~~Gy~~v~vt-~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 479 (527)
T 2yeq_A 404 EFVGTSITSGGNGADKRADTDQILKENPH-IQFFNDYRGYVRCTVT-PHQWKADYRVMPFVTEPGAAISTRASFVYQK 479 (527)
T ss_dssp EEECCCSSTTCSCBSBCTTHHHHHHHCTT-EEEEEBCEEEEEEEEE-TTEEEEEEEEESCSSSSCCCCEEEEEEEECS
T ss_pred EEEcCCeeCCCCcccchhhhhhhhhcCCc-ceeeeCCCCEEEEEEe-ccEEEEEEEEeCCccCCCCcceeeeEEEEeC
Confidence 4554332 11111000 001112344 3455578999999995 4679999987753 2223355666644
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=262.69 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=175.8
Q ss_pred CCCCCCCeEEEEEecCCCCCC-------h---HHHHHH-hhcCCCceEEccccccccccch----hhHHHh-hhhhhhh-
Q 013955 130 TPPAQFPITFAVAGDLGQTGW-------T---KSTLDH-IGQCKYDVHLLPGDLSYADYMQ----HRWDTF-GELVQPL- 192 (433)
Q Consensus 130 T~p~~~~~~f~~~gD~~~~~~-------~---~~~l~~-i~~~~pd~vl~~GD~~~~~~~~----~~w~~~-~~~~~~l- 192 (433)
|+| ..++||+++||+|.... . .+.+.. ++..+|||||++||++|..+.. .+|... .+.+...
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 344 57899999999997642 1 122332 4467999999999998865431 233322 2222211
Q ss_pred hhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEe------CeEEEEEEcccCC----------
Q 013955 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD---------- 256 (433)
Q Consensus 193 ~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~---------- 256 (433)
...+|+++++||||..........+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 151 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 151 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTC
T ss_pred hcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCcccccc
Confidence 12589999999999854321111122222344444 46888887 5899999998531
Q ss_pred -------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 257 -------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 257 -------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.....+|++||++.|++.. .+|+||++|+|++..... +.....++.|.++|++++|+++|+||+|.++
T Consensus 152 ~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~ 226 (313)
T 1ute_A 152 QPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ 226 (313)
T ss_dssp SCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred ccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhhh
Confidence 0124799999999999873 479999999999876531 2233467889999999999999999999998
Q ss_pred eeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEec----cccEEEEEEEcCceEEEEEEEeCCCCCeee
Q 013955 330 RSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREA----SFGHGELKIVNSTHAFWSWHRNDDDEPVRS 405 (433)
Q Consensus 330 r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~ 405 (433)
+..+ .+|+.||++|++|.............+.+..|... ..||.+|++. ++.++++|++. +|+ ++
T Consensus 227 ~~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~~~~~-~g~--~~ 295 (313)
T 1ute_A 227 YLQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVTYIEA-SGK--SL 295 (313)
T ss_dssp EEEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEEEEET-TSC--EE
T ss_pred hccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEEEEcC-CCc--EE
Confidence 8863 35899999999886432111000011233445433 3799999995 56799999985 665 99
Q ss_pred eEEEEEeCC
Q 013955 406 DQLWITSLV 414 (433)
Q Consensus 406 d~f~i~~~~ 414 (433)
|+|+|.|..
T Consensus 296 ~~~~l~~~~ 304 (313)
T 1ute_A 296 FKTKLPRRA 304 (313)
T ss_dssp EEEEECCCC
T ss_pred EEEEecccc
Confidence 999998874
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=208.66 Aligned_cols=237 Identities=17% Similarity=0.152 Sum_probs=161.9
Q ss_pred CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhh--CC
Q 013955 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--AR 196 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~i 196 (433)
..++||++++|+|.... .+++++.+.+ .++|+||++||+++.+.. ..|+.+.+.++.+.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP-AAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH-HHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHhhcCC
Confidence 67899999999996421 1335555655 799999999999986653 566666667776633 58
Q ss_pred CceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhh
Q 013955 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLS 272 (433)
Q Consensus 197 P~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~ 272 (433)
|++.++||||+.. .+. ..+... .......+|++++++++|++||+.... ....+|++||++.|+
T Consensus 102 pv~~v~GNHD~~~------~~~---~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~ 169 (330)
T 3ib7_A 102 ELVWVMGNHDDRA------ELR---KFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 169 (330)
T ss_dssp EEEECCCTTSCHH------HHH---HHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTT
T ss_pred CEEEeCCCCCCHH------HHH---HHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHH
Confidence 9999999999831 111 111100 011235789999999999999996532 246899999999999
Q ss_pred ccccCCCCeEEEEecccccCCCCCCC-CCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 273 KVDRKKTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 273 ~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
.... ..+|+++|||++....... ......++.+.+++++++++++|+||+|...... -+|+.++++|+
T Consensus 170 ~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs 238 (330)
T 3ib7_A 170 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASA 238 (330)
T ss_dssp SCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCC
T ss_pred hccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEecCc
Confidence 8753 2378899998876532211 1111245789999999999999999999987543 24788888887
Q ss_pred CCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCC
Q 013955 352 GGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDD 400 (433)
Q Consensus 352 gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g 400 (433)
.+... ....+.. .........||.++++.+ ..+.++++..+.+
T Consensus 239 ~~~~~----~~~~~~g-~~~~~~~~~gy~iv~i~~-~~~~~~~v~~~~~ 281 (330)
T 3ib7_A 239 TCYTQ----DLTVAAG-GTRGRDGAQGCNLVHVYP-DTVVHSVIPLGGG 281 (330)
T ss_dssp SSCEE----CTTSCTT-CCCEESCSCEEEEEEECS-SCEEEEEEECSCC
T ss_pred ceecc----CCCCCCc-ceeccCCCCceEEEEEEC-CCeEEEEeccCCC
Confidence 66431 1111111 112234457899999965 4588999986543
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-23 Score=192.81 Aligned_cols=230 Identities=14% Similarity=0.135 Sum_probs=151.3
Q ss_pred eEEEEEecCCCCCC-------------hHHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceec
Q 013955 137 ITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v 201 (433)
+||++++|+|.... .+++++.+.+ .++|+||++||+++.+.. ..|+.+.+.++.+ .+|++.+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP-EEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH-HHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhc--CCCEEEE
Confidence 58999999997641 1334455554 368999999999986543 4555555555554 4899999
Q ss_pred cCCCcCCCCCccccccc-cccccc-ccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhhccc
Q 013955 202 QGNHEKESIPLIMDAFQ-SYNARW-KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVD 275 (433)
Q Consensus 202 ~GNHD~~~~~~~~~~~~-~y~~~~-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~~~~ 275 (433)
+||||... .+. .+...| ..+. . .+..+|+++.++++|++||+.... ....+|++||++.|++.+
T Consensus 78 ~GNHD~~~------~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~ 147 (274)
T 3d03_A 78 PGNHDDKA------LFLEYLQPLCPQLGS--D--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG 147 (274)
T ss_dssp CCTTSCHH------HHHHHHGGGSGGGCS--C--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCHH------HHHHHhhhhhcCccc--C--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCC
Confidence 99999842 111 111111 1111 0 023578899999999999996432 235899999999999862
Q ss_pred cCCCCeEEEEecccccCCCCCCCC-CChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEEC-CC
Q 013955 276 RKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIG-DG 352 (433)
Q Consensus 276 ~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G-~g 352 (433)
.+++|+++|+|++........ ......+.+.++++++ +|+++|+||+|..+.... +|+.+++++ ++
T Consensus 148 ---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~--------~g~~~~~~pg~~ 216 (274)
T 3d03_A 148 ---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY--------RQALISTLPGTV 216 (274)
T ss_dssp ---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------TTEEEEECCCSS
T ss_pred ---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------CCEEEEEcCCcc
Confidence 347999999999875432110 1112346888999999 899999999999876541 355555544 33
Q ss_pred CCCCcccccCCCCCCCc-ceeEeccccEEEEEEEcCceEEEEEEEeC
Q 013955 353 GNKEGLARKYKNPQPDW-SVFREASFGHGELKIVNSTHAFWSWHRND 398 (433)
Q Consensus 353 G~~~~~~~~~~~~~p~~-~~~~~~~~G~~~l~v~~~~~l~~~~~~~~ 398 (433)
+... .. .+.+ ..+.....||..+++.++ .+++++++..
T Consensus 217 ~~~~-----~~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~~ 255 (274)
T 3d03_A 217 HQVP-----YC--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSLA 255 (274)
T ss_dssp CBCC-----CC--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEECS
T ss_pred eeec-----cC--CCccccccccCCCceEEEEEeCC-cEEEEEEecC
Confidence 3321 11 1111 234445689999999665 6889998864
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=197.97 Aligned_cols=225 Identities=17% Similarity=0.143 Sum_probs=148.1
Q ss_pred CCCeEEEEEecCCCCCC--------------------hHHHHHHhhcCCCceEEccccccccccchh--hHHHhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQH--RWDTFGELVQP 191 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~--~w~~~~~~~~~ 191 (433)
...+||++++|+|.... .+++++.+.+.+||+||++||+++...... .++.+....+.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 45799999999987642 123344455689999999999998654211 13333333333
Q ss_pred hhh-CCCceeccCCCcCCCCCcccccccccccccc-------------cCCCCCCCCCCceEEEEe-CeEEEEEEcccCC
Q 013955 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-------------MPFEESGSNSNLYYSFDV-AGAHLIMLGSYAD 256 (433)
Q Consensus 192 l~~-~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~ 256 (433)
+.. .+|+++++||||...... ..+...+. +|. .+..||+|+. ++++||+||+...
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~~~~ 152 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFSR-----PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDAYDL 152 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCCH-----HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCTTSB
T ss_pred HHhcCCcEEEecCCCCcccCCH-----HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcCcee
Confidence 332 489999999999842111 11112221 121 1357899998 8999999998541
Q ss_pred ----------------------------------------------CCCChHHHHHHHHHhhccccCCCCeEEEEecccc
Q 013955 257 ----------------------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (433)
Q Consensus 257 ----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (433)
.....+|++||++.|++++++ ..++||++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~ 231 (322)
T 2nxf_A 153 SVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV 231 (322)
T ss_dssp CSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC
T ss_pred cccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC
Confidence 012378999999999987532 246899999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCc
Q 013955 291 YNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDW 369 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~ 369 (433)
+........ .....+.+.++++++ +|+++|+||+|.+++... .+|+.|+++|+.- .. +
T Consensus 232 ~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~-------~~--~---- 290 (322)
T 2nxf_A 232 HPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVI-------ET--P---- 290 (322)
T ss_dssp CTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGG-------GC--C----
T ss_pred CCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchh-------hC--C----
Confidence 876532100 111357899999999 799999999999987652 2478888766541 00 1
Q ss_pred ceeEeccccEEEEEEEcCceEEEEEE
Q 013955 370 SVFREASFGHGELKIVNSTHAFWSWH 395 (433)
Q Consensus 370 ~~~~~~~~G~~~l~v~~~~~l~~~~~ 395 (433)
....||..+++.+ ..++++.+
T Consensus 291 ----~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 291 ----PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp ----TTSCEEEEEEECS-SEEEEEEE
T ss_pred ----CCCCcEEEEEEEC-CeEEEEec
Confidence 1246889999854 45666654
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-19 Score=181.98 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=127.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------------h----HHHHHHhhcCCCceEEccccccccccchhhHHHhh
Q 013955 134 QFPITFAVAGDLGQTGW-----------------------T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG 186 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------------~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~ 186 (433)
..++||++++|+|.... . +.+++.+.+.+||+||++||+++.+.. ..++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK-TSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH-HHHHHHH
Confidence 57899999999997532 1 223444557789999999999986653 3455666
Q ss_pred hhhhhhhh-CCCceeccCCCcCCCCCccc-c----------cccccccccccCCC-CC---CCCCCceEEEEeCeEEEEE
Q 013955 187 ELVQPLAS-ARPWMVTQGNHEKESIPLIM-D----------AFQSYNARWKMPFE-ES---GSNSNLYYSFDVAGAHLIM 250 (433)
Q Consensus 187 ~~~~~l~~-~iP~~~v~GNHD~~~~~~~~-~----------~~~~y~~~~~~p~~-~~---~~~~~~~ys~~~g~v~fi~ 250 (433)
+.++.+.. .+|++.++||||........ . ....|...|..... .. ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995421100 0 01112222211000 00 0011234444578999999
Q ss_pred EcccCC------------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCC-CChhHHHHHHHHHHHcCC
Q 013955 251 LGSYAD------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAASV 317 (433)
Q Consensus 251 lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~~V 317 (433)
||+... .....+|++||++.|++.+.. ...+|+++|+|++........ ......+.+.+++++++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 999642 123589999999999987542 245899999999865432111 111246789999999999
Q ss_pred cEEEecCcccceee
Q 013955 318 DLVLAGHVHAYERS 331 (433)
Q Consensus 318 dlvlsGH~H~y~r~ 331 (433)
+++|+||+|.....
T Consensus 275 ~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 275 DFSLSGHIHTQNIR 288 (443)
T ss_dssp CEEEECSSCSCEEE
T ss_pred eEEEECCcccCchh
Confidence 99999999997654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.9e-16 Score=143.43 Aligned_cols=170 Identities=10% Similarity=-0.035 Sum_probs=99.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
++||+++||+|.+.. .+++++.+.+.+||+||++||+++.+.....+..+.+.++.+ .+|+++++||||....
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~---- 78 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW---- 78 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH----
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH----
Confidence 589999999997532 133444455569999999999997653333333343333332 4799999999998421
Q ss_pred cccccccccc----ccCCCCCCCCCCceEEEEeC-eEEEEEEcccC--CCCCChHH--------HHHHHHHhhccccCCC
Q 013955 215 DAFQSYNARW----KMPFEESGSNSNLYYSFDVA-GAHLIMLGSYA--DYDEYSDQ--------YRWLKDDLSKVDRKKT 279 (433)
Q Consensus 215 ~~~~~y~~~~----~~p~~~~~~~~~~~ys~~~g-~v~fi~lds~~--~~~~~~~Q--------~~WL~~~L~~~~~~~~ 279 (433)
......+ ..|... ..... .+.++ +++|+.++... .+....+| .+|+++.|++...
T Consensus 79 ---~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 148 (228)
T 1uf3_A 79 ---EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD--- 148 (228)
T ss_dssp ---HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---
T ss_pred ---HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCC---
Confidence 1011110 001000 00011 24456 78999887421 11112222 2444555555432
Q ss_pred CeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
.+.|+++|+|++...... . ....+.+++++++++++++||+|
T Consensus 149 ~~~il~~H~p~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNE--Q---GSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp CCEEEEESSCBCBTTTBT--T---SBHHHHHHHHHHCCSEEEECCSS
T ss_pred CCeEEEEccCcccCCccc--c---CHHHHHHHHHHhCCCEEEEcccc
Confidence 358999999987642111 1 12467778888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=140.49 Aligned_cols=181 Identities=10% Similarity=0.093 Sum_probs=102.2
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhh-----------------------HHHhhhhhhh
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR-----------------------WDTFGELVQP 191 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~-----------------------w~~~~~~~~~ 191 (433)
++||+++||+|.+.. ..++++.+...++|+||++||+++....... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 589999999997643 3455666667799999999999976532110 0223344455
Q ss_pred hhh-CCCceeccCCCcCCCCCcccccccccccccc-cCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-CCChHHHH---
Q 013955 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-MPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-DEYSDQYR--- 265 (433)
Q Consensus 192 l~~-~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~-~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~~~~~Q~~--- 265 (433)
+.. .+|++.++||||..... .+........ .|. ...-.....+.+++++|++++..... ....+++.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~----~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 157 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI----FLRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYP 157 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH----HHHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEE
T ss_pred HHhcCCcEEEEcCCCCchhhh----hHHHHhhhccCCcc---eEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcc
Confidence 543 48999999999984211 0000100000 000 00001112367889999999753210 11122222
Q ss_pred -HHH----HHhhccccCCCCeEEEEecccccCCCCCCC--CCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 266 -WLK----DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 266 -WL~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
|+. +.|++.. + ...|+++|+|++....... .........+.+++++++++++++||+|
T Consensus 158 ~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 158 RWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp HHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 443 3333332 2 2469999999875311110 0001122567788888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.3e-15 Score=143.80 Aligned_cols=244 Identities=12% Similarity=0.103 Sum_probs=127.9
Q ss_pred CCCeEEEEEecCCCC----CC-------------hHHHHHHhhcCCCceEEcccc-ccccccch-hhHHHhhhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQT----GW-------------TKSTLDHIGQCKYDVHLLPGD-LSYADYMQ-HRWDTFGELVQPLAS 194 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~----~~-------------~~~~l~~i~~~~pd~vl~~GD-~~~~~~~~-~~w~~~~~~~~~l~~ 194 (433)
...+||++++|+|.+ .. .+.+++.+.+.+||+||++|| +++..... .....+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999966 21 123444455789999999999 77654432 223445566666643
Q ss_pred CCCceeccCCCcCCCCCcccccccccccc----cccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-------CCChHH
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNAR----WKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------DEYSDQ 263 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~----~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-------~~~~~Q 263 (433)
.+|++.++||||... .. ....+... +.+..+. . ....+.++.+++.|++++..... ....+|
T Consensus 96 ~~pv~~i~GNHD~~~-~~---~~~~~l~~~g~nv~v~~~~--~-~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~ 168 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-LK---LFGNFVTSISSDITFVMSF--E-PVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFF 168 (336)
T ss_dssp HSCEEECCC-------CH---HHHHHHHHHCSSEEECCSS--S-CEEEECTTSCEEEEEEECCC-------CCSSHHHHH
T ss_pred cCCEEEECCCCCccc-cc---cHHHHHHhcCCEEEEEecc--c-ccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHH
Confidence 389999999999854 11 11111111 1111000 0 00011122367889888643221 112567
Q ss_pred HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCc
Q 013955 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343 (433)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g 343 (433)
++|+.+.|...-.....++|+++|.|+....... +........+...+.+.++|++++||+|..+.... +
T Consensus 169 ~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~---------~ 238 (336)
T 2q8u_A 169 LESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK---------Q 238 (336)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------CCCEECGGGSCTTSSEEEEESCSSCEEEEE---------T
T ss_pred HHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-CccchhhcccCHHHccccCCEEEEccccCceEeCC---------C
Confidence 8999888865310123479999999987532110 00000000011123346899999999999876531 2
Q ss_pred cEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEE
Q 013955 344 AVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410 (433)
Q Consensus 344 ~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i 410 (433)
+..+.+|+... ..+... ....||..+++.++...+++++.... . -+-.+.+
T Consensus 239 ~~i~y~GS~~~-----~s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~-r--~~~~~~~ 289 (336)
T 2q8u_A 239 PLTIYPGSLIR-----IDFGEE--------ADEKGAVFVELKRGEPPRYERIDASP-L--PLKTLYY 289 (336)
T ss_dssp TEEEECCCSSC-----CSGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC-C--CEEEEEE
T ss_pred ccEEECCCCcC-----CCcccc--------CCCCEEEEEEEeCCCccEEEEEECCC-E--EEEEeec
Confidence 22233444311 111110 11468999999765557889998643 3 3444444
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.48 E-value=3.7e-12 Score=113.47 Aligned_cols=179 Identities=17% Similarity=0.154 Sum_probs=111.0
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 135 FPITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~---~~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
..+|++++||+|.... ..+.+.. +...++|+|+++||++.. .. .+.++.+ ..|++.++||||...
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~----~~----~~~l~~~--~~~~~~v~GNhD~~~- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK----ES----YDYLKTL--AGDVHIVRGDFDENL- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH----HH----HHHHHHH--CSEEEECCCTTCCCT-
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH----HH----HHHHHhc--CCCEEEEcCCcCccc-
Confidence 3489999999996532 2233333 345689999999999851 11 2223333 258999999999842
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccc
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (433)
.+|. ...++. ..++|++.|.++
T Consensus 78 --------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~~ 99 (192)
T 1z2w_A 78 --------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGHQ 99 (192)
T ss_dssp --------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSCC
T ss_pred --------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCCc
Confidence 1221 111111 125788888554
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcc
Q 013955 291 YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWS 370 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~ 370 (433)
+.... ..+.+..++++.+++++++||+|...... .+++.++..|+.+.+.. +. +.
T Consensus 100 ~~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~~-~~----- 154 (192)
T 1z2w_A 100 VIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYN---AL-ET----- 154 (192)
T ss_dssp CCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCC---SS-CS-----
T ss_pred CCCCC--------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCC---CC-Cc-----
Confidence 43211 12456677778899999999999865332 24788888888754321 00 00
Q ss_pred eeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEEe
Q 013955 371 VFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS 412 (433)
Q Consensus 371 ~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~~ 412 (433)
....+|..+++.+ ..+++++++.+.++ ..+.++++.|
T Consensus 155 ---~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 155 ---NIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp ---CCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ---CCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 1246889999865 46889999876664 4566766655
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=118.57 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=110.5
Q ss_pred CeEEEEEecCCCCCC---hHHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCC
Q 013955 136 PITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~---~~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~ 211 (433)
.+|++++||+|.+.. ..+.+.+ +...++|+|+++||+++. ...+.++.+ ..|++.++||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~--------~~l~~l~~~--~~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH--------HHHHHHHHc--CCCEEEecCCCcCcccc
Confidence 589999999997532 2233443 456789999999999851 122233333 26899999999985311
Q ss_pred cccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEeccccc
Q 013955 212 LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (433)
Q Consensus 212 ~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (433)
. ...+.. .+| ....+ +. ..++|++.|.+++
T Consensus 95 ~----~~~~~~--~lp---------~~~~~-------------------------------~~----~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 95 P----DPESNG--VFP---------EYVVV-------------------------------QI----GEFKIGLMHGNQV 124 (215)
T ss_dssp C----CGGGTB--CCC---------SEEEE-------------------------------EE----TTEEEEEECSTTS
T ss_pred c----ChhhHh--hCC---------ceEEE-------------------------------ec----CCeEEEEEcCCcc
Confidence 0 000000 000 00000 00 1247889996554
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcce
Q 013955 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSV 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~ 371 (433)
.... ..+.+..++++.+++++++||+|...... .+++.++..|+.+.+.. +. +.
T Consensus 125 ~~~~--------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~~-~~------ 178 (215)
T 2a22_A 125 LPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS---AL-TP------ 178 (215)
T ss_dssp SSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC---TT-ST------
T ss_pred CCCC--------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCC---CC-CC------
Confidence 3211 12456677778899999999999865432 24788888888754311 00 00
Q ss_pred eEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 372 FREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 372 ~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
....+|..+++.+ ..+++++++.++++ ..+.+..+.
T Consensus 179 --~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~ 214 (215)
T 2a22_A 179 --DAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFS 214 (215)
T ss_dssp --TCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEE
T ss_pred --CCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEee
Confidence 1246889999865 46889998876664 335554443
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=5.3e-13 Score=125.84 Aligned_cols=204 Identities=15% Similarity=0.045 Sum_probs=112.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
...+||+++||+|..... + .-.++|+||++||+++.+.. .+.+.+.+.++.+. ..|+++++||||....+..
T Consensus 57 ~~~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~g~~-~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTELGLP-SEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSSCCH-HHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCCCCH-HHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 567999999999976432 1 23589999999999986553 34444445554442 2468999999999533210
Q ss_pred cccc--ccccc--cc-ccCCC---CCCC-CCCce----EEEEeCeEEEEEEcccCCCCC---ChHHHHHHHHHhhccccC
Q 013955 214 MDAF--QSYNA--RW-KMPFE---ESGS-NSNLY----YSFDVAGAHLIMLGSYADYDE---YSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 214 ~~~~--~~y~~--~~-~~p~~---~~~~-~~~~~----ys~~~g~v~fi~lds~~~~~~---~~~Q~~WL~~~L~~~~~~ 277 (433)
.... ..+.. .+ ..+.. .... ..+.. -+..+++++|++..-...+.. ..++.+++.+.......
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 0000 00000 00 00000 0000 00111 135678899988543222211 12222344444443322
Q ss_pred CCCeEEEEecccccCCCCCCC-CCChhHHHHHHHHH-HHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLL-YAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~-~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
...|+++|.|++...+... .......+.|.+.+ ++.+++++++||+|....... .+++.+|..|+-|..
T Consensus 208 --~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 208 --GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCTVS 278 (296)
T ss_dssp --TCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSCTT
T ss_pred --CCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCCcC
Confidence 2369999999987643210 00011235666666 689999999999998543221 247888988887654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.6e-12 Score=127.08 Aligned_cols=229 Identities=13% Similarity=-0.048 Sum_probs=120.6
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhhh-CCC
Q 013955 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARP 197 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~~-~iP 197 (433)
..++||++++|+|.+.. ...+++.+...+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 67899999999997642 1234445567899999999999876533 2234455666666654 489
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccC
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~ 277 (433)
++.++||||.............+...+..-. ...++..+-+++.+++++...... .....+||+..-.+..
T Consensus 98 v~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~-- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK-- 168 (386)
T ss_dssp EEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH--
T ss_pred EEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc--
Confidence 9999999998542110000000100010000 011111112568899998653321 1223334332111111
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCc
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~ 357 (433)
...++|+++|.|+........... +.. +. ++|++++||+|..+.. + ..++..+.+|+-...
T Consensus 169 ~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l~--~~d~v~~GH~H~~~~~-~-------~~~~~i~ypGS~~~~-- 229 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIPLDYELE------HFD-LP--KFSYYALGHIHKRILE-R-------FNDGILAYSGSTEII-- 229 (386)
T ss_dssp TCSSEEEEECCCCTTTSSSSCSSC------GGG-SC--CCSEEEECSCCSCEEE-E-------CSSSEEEECCCSSCC--
T ss_pred cCCCEEEEECcCccccCCCCcccC------HHH-hh--hCCeEEccCCCCCccc-c-------CCCceEEECCccccc--
Confidence 123589999998754211111000 111 11 3999999999987432 2 124555555543211
Q ss_pred ccccCCCCCCCcceeEeccccEEEEEEEcC--ceEEEEEEEe
Q 013955 358 LARKYKNPQPDWSVFREASFGHGELKIVNS--THAFWSWHRN 397 (433)
Q Consensus 358 ~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~--~~l~~~~~~~ 397 (433)
.+... ..+.....||..+++.++ ...+++++..
T Consensus 230 ---~~~e~----~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l 264 (386)
T 3av0_A 230 ---YRNEY----EDYKKEGKGFYLVDFSGNDLDISDIEKIDI 264 (386)
T ss_dssp ---SGGGT----HHHHHHCSEEEEEECCSSSCCGGGEEEEEC
T ss_pred ---Ccchh----ccccCCCCEEEEEEEecCcCCCceEEEEEC
Confidence 11100 000112357888888541 3456788876
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-12 Score=121.17 Aligned_cols=220 Identities=14% Similarity=0.034 Sum_probs=121.3
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
..+.|++++||+|.+.. ..++++.+...++|.|+++||+++.+... ....+.++. ..|++.++||||......
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~---~~~~~~v~GNhD~~~~~~ 82 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQ---LPITARVLGNWEDSLWHG 82 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHT---SCEEEECCCHHHHHHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHc---cCCEEEEcCChHHHHHHh
Confidence 56899999999985422 23556666677999999999999755421 222223332 247899999999732100
Q ss_pred ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccC
Q 013955 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (433)
Q Consensus 213 ~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (433)
....+..+. ....+.. . ...........++++||++.-......-....|++.|..+..
T Consensus 83 -------~~~~~~~~~-----~~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~ 141 (270)
T 3qfm_A 83 -------VRKELDSTR-----PSQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDK 141 (270)
T ss_dssp -------HTTCSCTTS-----HHHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTB
T ss_pred -------hccccCCCc-----HHHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCC
Confidence 000000000 0000000 0 000001123578899998654432111112467788876543
Q ss_pred CCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCccee
Q 013955 293 SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVF 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~ 372 (433)
... ..-......+.+..++.+.+++++|+||+|....... .+|..+|..|+.|.+.. ..+.++ .
T Consensus 142 ~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~-----~~~~~~--~- 205 (270)
T 3qfm_A 142 NWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFF-----LDAQLR--K- 205 (270)
T ss_dssp SSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCC-----SSTTGG--G-
T ss_pred CCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCC-----CCcccc--C-
Confidence 211 1001111235677788888999999999996443221 25888999999887632 111000 0
Q ss_pred EeccccEEEEEEEcCceEEEEEEEe
Q 013955 373 REASFGHGELKIVNSTHAFWSWHRN 397 (433)
Q Consensus 373 ~~~~~G~~~l~v~~~~~l~~~~~~~ 397 (433)
.....|+++++.++...+++|++.
T Consensus 206 -~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 206 -DLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -CCCCEEEEEEecCCCceEEEEEEe
Confidence 113478899986654467888775
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-11 Score=106.75 Aligned_cols=165 Identities=15% Similarity=0.109 Sum_probs=104.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
.+|++++||+|.... .+++++.+.. ++|+|+++||+.. +.++.+. .|++.++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 489999999984311 1234444444 8999999999732 1122332 28999999999741
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
.+|. ...+. . ...+|++.|.|++...
T Consensus 66 ----------~~p~---------~~~~~-------------------------------~----~~~~i~~~Hg~~~~~~ 91 (176)
T 3ck2_A 66 ----------GYPE---------RLVTE-------------------------------L----GSTKIIQTHGHLFDIN 91 (176)
T ss_dssp ----------TCCS---------EEEEE-------------------------------E----TTEEEEEECSGGGTTT
T ss_pred ----------cCCc---------EEEEE-------------------------------E----CCeEEEEECCCccCCC
Confidence 1121 00000 0 1147899998876532
Q ss_pred CCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEe
Q 013955 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFRE 374 (433)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~ 374 (433)
. + .+.+.+++++++++++++||+|...... .+++.++..|+.|.+. +..+
T Consensus 92 ~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~-------~~~~------- 141 (176)
T 3ck2_A 92 F-----N---FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR-------GTIR------- 141 (176)
T ss_dssp T-----C---SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC-------TTCC-------
T ss_pred C-----C---HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCC-------CCCC-------
Confidence 1 1 1456777888999999999999865432 2478888888876431 1101
Q ss_pred ccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEE
Q 013955 375 ASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLW 409 (433)
Q Consensus 375 ~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~ 409 (433)
..+|..+++.+ ..+++++++. +|+ ++.+++
T Consensus 142 -~~~y~il~~~~-~~~~v~~~~~-~~~--~~~~~~ 171 (176)
T 3ck2_A 142 -ECLYARVEIDD-SYFKVDFLTR-DHE--VYPGLS 171 (176)
T ss_dssp -SCCEEEEEECS-SEEEEEEECT-TSC--BCTTCC
T ss_pred -CCeEEEEEEcC-CEEEEEEEEE-CCE--Ecchhh
Confidence 25889999854 5688999985 454 555443
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.6e-13 Score=122.30 Aligned_cols=188 Identities=9% Similarity=-0.017 Sum_probs=102.8
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh---cC--CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIG---QC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~---~~--~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
+|++++||+|.... ..++++.+. .. ++|++|++||+++.+.... ...+.+..+....|++.++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 68999999986422 234556665 55 8999999999997654221 222334444333689999999997321
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcc--cCCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
. +...+. ... .. .. ++..... ... ........+|++||++........-....|++.|+
T Consensus 79 ~--------~~~~~~-~~~-~~----~~--~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~ 139 (252)
T 1nnw_A 79 M--------SDPHAT-DPG-YI----DK--LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYG 139 (252)
T ss_dssp H--------SCTTCS-SSG-GG----GG--SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESS
T ss_pred c--------cccccC-Ccc-cc----cc--hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcC
Confidence 0 000000 000 00 00 0000000 000 00001236788998764332211101247888898
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
+++...... .......+.+..++.++ +++++++||+|...... -+++.++..|+.|.+
T Consensus 140 ~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~~ 198 (252)
T 1nnw_A 140 SPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFP 198 (252)
T ss_dssp CSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSC
T ss_pred CCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccCC
Confidence 774322111 11111235678888888 99999999999865433 147888999887653
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.36 E-value=3.9e-12 Score=125.43 Aligned_cols=230 Identities=13% Similarity=0.120 Sum_probs=122.5
Q ss_pred eEEEEEecCCCCCC----h-------------HHHHHHhhcCCCceEEcccccc-ccccc-hhhHHHhhhhhhhhhhCCC
Q 013955 137 ITFAVAGDLGQTGW----T-------------KSTLDHIGQCKYDVHLLPGDLS-YADYM-QHRWDTFGELVQPLASARP 197 (433)
Q Consensus 137 ~~f~~~gD~~~~~~----~-------------~~~l~~i~~~~pd~vl~~GD~~-~~~~~-~~~w~~~~~~~~~l~~~iP 197 (433)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999997653 1 2233444578999999999999 54332 2334555566666654499
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEE--eC-eEEEEEEcccCCCC----CChHHHHHHHHH
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD--VA-GAHLIMLGSYADYD----EYSDQYRWLKDD 270 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~--~g-~v~fi~lds~~~~~----~~~~Q~~WL~~~ 270 (433)
++.++||||..+.. -+..... .++.+.........+.+. .| .+.+..+.-..... ....+.+|+.+.
T Consensus 81 v~~i~GNHD~~~~~----~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~ 154 (379)
T 3tho_B 81 VVVLPGNQDWKGLK----LFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESR 154 (379)
T ss_dssp EEECCCTTSCTTHH----HHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHH
T ss_pred EEEEcCCCccccCc----ccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHH
Confidence 99999999964310 0001100 011100000001122333 23 47777775432211 135678999988
Q ss_pred hh----ccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEE
Q 013955 271 LS----KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVY 346 (433)
Q Consensus 271 L~----~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~y 346 (433)
|+ ...+ ...+.|+++|.++.........+.. ....+...+...++|+++.||.|..+... ++...
T Consensus 155 l~~~~~~~~~-~~~~~I~l~H~~v~g~~~~~~se~~-~~~~v~~~~~~~~~dyvalGH~H~~q~~~---------~~~~i 223 (379)
T 3tho_B 155 LNKLYEEALK-KEDFAIFMGHFTVEGLAGYAGIEQG-REIIINRALIPSVVDYAALGHIHSFREIQ---------KQPLT 223 (379)
T ss_dssp HHHHHHHHHT-CSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEEE---------ETTEE
T ss_pred HHHHHHHhcC-CCCCeEEEEeccccCCccCCCCccc-cccccCHHHcCcCCCEEEcccccCCeEeC---------CCCcE
Confidence 87 2211 3346899999987543220000000 00111112224689999999999986442 11222
Q ss_pred EEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEE
Q 013955 347 ITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHR 396 (433)
Q Consensus 347 i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~ 396 (433)
+-+|+ +.+ ..+... ...-||..+++.++...+++++.
T Consensus 224 ~y~GS---~~~--~~f~E~--------~~~k~~~lv~~~~~~~~~v~~i~ 260 (379)
T 3tho_B 224 IYPGS---LIR--IDFGEE--------ADEKGAVFVELKRGEPPRYERID 260 (379)
T ss_dssp EECCC---SSC--CSGGGS--------SSCCEEEEEECCSSSCCEEEEEE
T ss_pred EecCC---CCC--CCcccc--------cCCCEEEEEEEcCCCcceEEEeC
Confidence 33333 321 112111 11357888888665556778876
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-10 Score=100.17 Aligned_cols=64 Identities=16% Similarity=0.067 Sum_probs=43.4
Q ss_pred CCCeEEEEEecCCCC---CChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQT---GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~---~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.+.+|++++||+|.. ....+.++.+. .++|+|+++||+++. ...+.++.+ ..|++.++||||..
T Consensus 20 ~~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 20 QGVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp --CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECCCSSSCG
T ss_pred CcceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEECCCCcH
Confidence 345899999999942 22345556555 789999999999862 122233333 26999999999973
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.20 E-value=3.9e-11 Score=107.07 Aligned_cols=153 Identities=15% Similarity=0.166 Sum_probs=89.8
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCcee
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~ 200 (433)
++++++||+|.+... +.+++.+.+ .++|+|+++||+++.+ ..+....+.++.+. .|++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l~--~~~~~ 76 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKALP--GRKIL 76 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHSS--SEEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHCC--CCEEE
Confidence 679999999965332 122333443 5899999999999754 12223333444432 58999
Q ss_pred ccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCC
Q 013955 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 280 (433)
++||||... ..+...|. . +. +..||+ +. . .
T Consensus 77 v~GNhD~~~--------~~~~~~~~--------------~----------l~----------~~~~l~----~~---~-~ 106 (195)
T 1xm7_A 77 VMGNHDKDK--------ESLKEYFD--------------E----------IY----------DFYKII----EH---K-G 106 (195)
T ss_dssp ECCTTCCCH--------HHHTTTCS--------------E----------EE----------SSEEEE----EE---T-T
T ss_pred EeCCCCCch--------hhhhhhhh--------------c----------hh----------HHHHHH----hc---C-C
Confidence 999999831 01111110 0 00 111221 11 1 2
Q ss_pred eEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCC-ccEEEEECC
Q 013955 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPC-GAVYITIGD 351 (433)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~-g~~yi~~G~ 351 (433)
.+|+++|+|++....... ....+.+.+++.+++++++|+||+|...... .++ ..+ |+.|+.+|.
T Consensus 107 ~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g--~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREGI--KCA--CKDYRIECINANV 171 (195)
T ss_dssp EEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC----CC--TTSSSCCEEECBG
T ss_pred cEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCccc--ccc--cccCCcceEEEeE
Confidence 489999999876543221 1345788899999999999999999865432 111 112 555676654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=4.4e-11 Score=110.73 Aligned_cols=179 Identities=16% Similarity=0.086 Sum_probs=98.2
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
..+|++++||+|.... ..++++.+. ++|.++++||+++.+.... ...+.+..+ .+++.++||||......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~---~~~~~v~GNhD~~~~~~- 72 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVL---APNISVIGNHDWACIGR- 72 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHH---CSSEECCCHHHHHHTCC-
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhc---CCCEEEeCchHHHHhcc-
Confidence 4689999999984421 123444444 9999999999997554221 222233332 23688999999842110
Q ss_pred cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCC
Q 013955 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (433)
Q Consensus 214 ~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (433)
... ..+.... .....| .......++++||++....... . .+++.|.++...
T Consensus 73 ----~~~-~~~~~~~----~~~~~~----------------~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 73 ----LSL-DEFNPVA----RFASYW----------------TTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRHP 123 (246)
T ss_dssp ----CCC-C--CGGG----GCHHHH----------------HHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSST
T ss_pred ----CCc-cccCHHH----HHHHHH----------------HHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCCc
Confidence 000 0000000 000000 0011347889999875443322 1 477888876553
Q ss_pred CCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeee----------cc--CCcc-CCCccEEEEECCCCCC
Q 013955 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR----------VN--NGKP-DPCGAVYITIGDGGNK 355 (433)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~----------~~--~~~~-~~~g~~yi~~G~gG~~ 355 (433)
.. ..... ...+.++|++++++++|+||+|....... .. .... -+.|..+++.|+-|.+
T Consensus 124 ~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 124 IW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQP 194 (246)
T ss_dssp TT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCC
T ss_pred cc-cccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCC
Confidence 21 11111 25677888999999999999997432210 00 0000 0235778889998875
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.5e-09 Score=107.07 Aligned_cols=246 Identities=15% Similarity=0.045 Sum_probs=125.6
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhh-------
Q 013955 133 AQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQP------- 191 (433)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~------- 191 (433)
....+||++++|+|.+... +++++.+.+.+||+||++||+++...... ....+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999986421 23455566889999999999998665421 12222222221
Q ss_pred -----h----------------------hhCCCceeccCCCcCCCCCcccccccccccccccCCC----CCCC-CCC---
Q 013955 192 -----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE----ESGS-NSN--- 236 (433)
Q Consensus 192 -----l----------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~----~~~~-~~~--- 236 (433)
| ...+|++++.||||...... +......+..|.. +... .++
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~----~~s~~~lL~~~g~v~l~g~~~~~~~i~~ 165 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDG----RYSALDILQVTGLVNYFGRVPENDNIVV 165 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---------CCCHHHHHHHTTSCEECCCCC---CEEE
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccc----cccHHHHhccCCeEEEeCCcccCCceeE
Confidence 1 12699999999999853211 1000010100100 0000 000
Q ss_pred ceEEEEeCe--EEEEEEcccCCCCCChHHH-HHHHHHhhc-ccc---CCCCeEEEEecccccCCCCCCCCCChhHHHHHH
Q 013955 237 LYYSFDVAG--AHLIMLGSYADYDEYSDQY-RWLKDDLSK-VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIME 309 (433)
Q Consensus 237 ~~ys~~~g~--v~fi~lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~ 309 (433)
....+..|+ +.+.++.-. . .+.+ .++.+.... ... ....+.|++.|..........+. .
T Consensus 166 ~pv~l~~g~~~valyG~~~~----~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi--p------- 231 (417)
T 4fbw_A 166 SPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL--P------- 231 (417)
T ss_dssp CCEEEEETTEEEEEEEECCC----C-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC--C-------
T ss_pred EeEEEEecCceEEEEeccCC----c-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC--c-------
Confidence 012234443 555555321 1 2111 233322211 111 23457899999876543211110 0
Q ss_pred HHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCce
Q 013955 310 PLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTH 389 (433)
Q Consensus 310 ~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~ 389 (433)
.-+...++|+|+.||+|..+...... ..+|+..+..|+.... .+.. -.....||..+++.+ ..
T Consensus 232 ~~l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~~-----s~~e-------~E~~~kg~~lvei~~-~~ 294 (417)
T 4fbw_A 232 ESFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSP-------GETAPKHCGILNITG-KD 294 (417)
T ss_dssp GGGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCH-------HHHSCCEEEEEEEET-TE
T ss_pred hhHhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCcC-----CCcc-------ccCCCCEEEEEEEEC-CE
Confidence 11445689999999999876542100 1235555555553221 1110 001246899999865 45
Q ss_pred EEEEEEEeCCCCCeeeeEEEEEeC
Q 013955 390 AFWSWHRNDDDEPVRSDQLWITSL 413 (433)
Q Consensus 390 l~~~~~~~~~g~~~v~d~f~i~~~ 413 (433)
+.++++....-..-+..+..+...
T Consensus 295 ~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 295 FHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEEECSSSCCEEEEEEEGGGC
T ss_pred EEEEEEECCCcccEEEEEEEeecc
Confidence 889999865434345565555444
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=102.69 Aligned_cols=141 Identities=12% Similarity=0.110 Sum_probs=83.8
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
.+|++++||+|.... .+++++.+...++|+|+++||+++. . ..+.++.+ ..|++.++||||....
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~----~----~~~~l~~l--~~~~~~V~GNhD~~~~---- 90 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFENL--NANIIATYGNNDGERC---- 90 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGGC--SSEEEEECCTTCCCHH----
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH----H----HHHHHHhc--CCCEEEEeCCCcchHH----
Confidence 489999999984321 2345556666899999999999852 1 12223322 4799999999998421
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
. +...+ .|. + ..+ + +.. . ...+. ..++|++.|.|++.
T Consensus 91 -~---~~~~~-~~~---~---~~~---------l--~~~-------~----------~~~~~--~~~~ill~Hg~~~~-- 127 (190)
T 1s3l_A 91 -K---LKEWL-KDI---N---EEN---------I--IDD-------F----------ISVEI--DDLKFFITHGHHQS-- 127 (190)
T ss_dssp -H---HHHHH-HHH---C---TTC---------E--EES-------E----------EEEEE--TTEEEEEEESCCHH--
T ss_pred -H---HHHHh-ccc---C---hhh---------h--ccc-------c----------eEEee--CCcEEEEECCChHH--
Confidence 1 11111 111 0 000 0 000 0 00111 12589999988643
Q ss_pred CCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCC
Q 013955 295 EAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGN 354 (433)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 354 (433)
+.+.+.+. +++++++||+|..+... .+++.++..|+.|.
T Consensus 128 -------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~~~ 167 (190)
T 1s3l_A 128 -------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCG 167 (190)
T ss_dssp -------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSC
T ss_pred -------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcccc
Confidence 33445555 99999999999876443 24788888888653
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-09 Score=106.06 Aligned_cols=244 Identities=15% Similarity=0.063 Sum_probs=123.9
Q ss_pred CCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhh--------
Q 013955 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQP-------- 191 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~-------- 191 (433)
...+||++++|+|.+... ..+++.+.+.+||+||++||+++...... ....+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 678999999999986431 34555666899999999999998765421 12222222221
Q ss_pred ----h----------------------hhCCCceeccCCCcCCCCCcccccccccccccccCCC----CCCC-CCC---c
Q 013955 192 ----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE----ESGS-NSN---L 237 (433)
Q Consensus 192 ----l----------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~----~~~~-~~~---~ 237 (433)
| ...+|++++.||||...... +......+..|.. +... .++ .
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~----~~s~~~LL~~~g~v~l~g~~~~~d~i~~~ 229 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDG----RYSALDILQVTGLVNYFGRVPENDNIVVS 229 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC------CCCHHHHHHHTTSCEECCCCSCSSSEEEC
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccc----cccHHHHhccCCcEEEeCCcccCCceeEE
Confidence 1 12699999999999853211 1000010000100 0000 000 0
Q ss_pred eEEEEeCe--EEEEEEcccCCCCCChHH-HHHHHHHhhc-ccc---CCCCeEEEEecccccCCCCCCCCCChhHHHHHHH
Q 013955 238 YYSFDVAG--AHLIMLGSYADYDEYSDQ-YRWLKDDLSK-VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEP 310 (433)
Q Consensus 238 ~ys~~~g~--v~fi~lds~~~~~~~~~Q-~~WL~~~L~~-~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 310 (433)
...+..|+ +.+.++.-. . .+. ..++.+.... ... ....+.|++.|..........+.. +
T Consensus 230 pv~l~kg~~~valyGl~y~----~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip-----e---- 295 (472)
T 4fbk_A 230 PILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP-----E---- 295 (472)
T ss_dssp CEEEEETTEEEEEEECCCC----C-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSCC-----G----
T ss_pred EEEEEeCCceEEEEecCCC----c-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccCC-----h----
Confidence 12234443 444444321 1 111 1233222211 111 123468999998765432111100 1
Q ss_pred HHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceE
Q 013955 311 LLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHA 390 (433)
Q Consensus 311 l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l 390 (433)
-+...++|+|+.||+|..+...... ..+++..+..|+.... .+... + ....||..+++.+ ..+
T Consensus 296 ~ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~~~-----s~~e~--E-----~~~kg~~lveI~~-~~v 358 (472)
T 4fbk_A 296 SFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSPG--E-----TAPKHCGILNITG-KDF 358 (472)
T ss_dssp GGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCGG--G-----CSCCEEEEEEEET-TEE
T ss_pred hhhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCcccc-----ccCcc--C-----CCCCEEEEEEEEC-CEE
Confidence 1334589999999999876542100 0134444545543211 11100 0 1246899999865 458
Q ss_pred EEEEEEeCCCCCeeeeEEEEEe
Q 013955 391 FWSWHRNDDDEPVRSDQLWITS 412 (433)
Q Consensus 391 ~~~~~~~~~g~~~v~d~f~i~~ 412 (433)
.++++....-..-+..+..+..
T Consensus 359 ~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 359 HLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp EEEEEECSSSCCEEEEEEEGGG
T ss_pred EEEEEECCCcccEEEEEEEEec
Confidence 9999987543434455544433
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.8e-09 Score=102.05 Aligned_cols=240 Identities=15% Similarity=0.073 Sum_probs=124.5
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhh------
Q 013955 133 AQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPL------ 192 (433)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l------ 192 (433)
....+||++++|+|.+... +.+++.+.+.+||+||++||+++.... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 3678999999999876421 234555668899999999999976554 22333344444432
Q ss_pred ----------------------------hhCCCceeccCCCcCCCCCccccccccc------ccccccCCCCCCCCCC--
Q 013955 193 ----------------------------ASARPWMVTQGNHEKESIPLIMDAFQSY------NARWKMPFEESGSNSN-- 236 (433)
Q Consensus 193 ----------------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y------~~~~~~p~~~~~~~~~-- 236 (433)
...+|++.+.||||....... .....+ ...|.... ..+.
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~-l~~~~lL~~~glv~~fg~~~----~~e~i~ 183 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA-LCALDILSCAGFVNHFGRSM----SVEKID 183 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT-BCHHHHHHHHTSEEECCCCC----CSSCEE
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc-cCHHHHhccCCcEEEECCcC----ccccee
Confidence 125999999999998532110 000011 11111000 0001
Q ss_pred -ceEEEEeCe--EEEEEEcccCCCCCChHHHHHHHHHhhc-----ccc---CCCCeEEEEecccccCCCCCCCCCChhHH
Q 013955 237 -LYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSK-----VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305 (433)
Q Consensus 237 -~~ys~~~g~--v~fi~lds~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~ 305 (433)
....+..|+ +.+.++.- .. .+ .+.+.+.. ... ....+.|++.|......+......
T Consensus 184 ~~Pv~l~~g~~~valyGl~~----~~-~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~ip----- 250 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGLGS----IP-DE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIP----- 250 (431)
T ss_dssp ECCEEEEETTEEEEEEEECC----CC-HH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSSCC-----
T ss_pred eEEEEEecCCEeEEEEeCCC----CC-HH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCccccCC-----
Confidence 012233353 55666632 11 22 22222221 111 123368999999763221111110
Q ss_pred HHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEE
Q 013955 306 AIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIV 385 (433)
Q Consensus 306 ~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~ 385 (433)
.. +...++|+|+.||+|..+...... ..+++..+..|+-... .+.. .....-||..+++.
T Consensus 251 ---~~-l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~~-----s~~e-------~E~~~k~~~lvei~ 310 (431)
T 3t1i_A 251 ---EQ-FLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVVT-----SLSP-------GEAVKKHVGLLRIK 310 (431)
T ss_dssp ---GG-GSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSCC-----SCCH-------HHHSCCEEEEEEEE
T ss_pred ---Hh-HhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCccc-----CcCc-------ccCCCCEEEEEEEE
Confidence 11 334579999999999976543111 0135544545543211 1110 00124589999986
Q ss_pred cCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 386 NSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 386 ~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
+ ..+.++++....-..-+..+..+.
T Consensus 311 ~-~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 311 G-RKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp T-TEEEEEEEECSSSCCEEEEEEEGG
T ss_pred C-CEEEEEEEECCCcceEEEEEEEEe
Confidence 5 468999998753333344444443
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.9e-10 Score=110.08 Aligned_cols=72 Identities=24% Similarity=0.230 Sum_probs=52.5
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhhh-CCCcee
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~~-~iP~~~ 200 (433)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 589999999987531 233444557899999999999976433 2344555566666654 589999
Q ss_pred ccCCCcCC
Q 013955 201 TQGNHEKE 208 (433)
Q Consensus 201 v~GNHD~~ 208 (433)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-08 Score=91.18 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=47.2
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccc---hhhH--HHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYM---QHRW--DTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~---~~~w--~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
..++++++||+|.... .+++++.+...++|+++++||+++.+.. ...| ....+.++.+. .|++.++||||..
T Consensus 24 ~mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 24 AMMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp -CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred ccEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 3489999999986421 2345555656789999999999975431 1111 22333333332 5899999999973
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.5e-08 Score=104.71 Aligned_cols=173 Identities=17% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCCeEEEEEecCCCCC--C----------------hHHHHHHhhcCCCc-eEEccccccccccchh--hHHHhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTG--W----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPL 192 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~--~----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~--~w~~~~~~~~~l 192 (433)
...++|+.++|+|..- . ....++++++.+|| ++|.+||++....... ......+.+..+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 4679999999998531 1 13455666677788 8899999987543211 111222223222
Q ss_pred hhCCCceeccCCCcCCCCCcccccccccccccccCC---CC--CCC-----CCCceEEEEeCe--EEEEEEcccC-----
Q 013955 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---EE--SGS-----NSNLYYSFDVAG--AHLIMLGSYA----- 255 (433)
Q Consensus 193 ~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~~--~~~-----~~~~~ys~~~g~--v~fi~lds~~----- 255 (433)
-+-+.++||||+.... +.+..+.+....|. |- ... ....|..++.++ +.|+.+.+..
T Consensus 107 ---g~d~~~lGNHEfd~g~---~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 180 (552)
T 2z1a_A 107 ---RYRAMALGNHEFDLGP---GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREIS 180 (552)
T ss_dssp ---TCCEEECCGGGGTTCH---HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHS
T ss_pred ---CCCccccccccccCCH---HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhcc
Confidence 3447789999996421 11111111111111 10 000 123455677776 5566665431
Q ss_pred CC------CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccc
Q 013955 256 DY------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (433)
Q Consensus 256 ~~------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 328 (433)
.. ....++.+...+.|++. +.+.+|+++|.|.... ..+.++ .+||++|+||+|..
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~~---~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgGHtH~~ 242 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLAK---GVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGGHSHTL 242 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHHT---TCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEECSSCCC
T ss_pred CCCCCcEECCHHHHHHHHHHHHHhc---CCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeCCcCcc
Confidence 00 01123333333444432 4557999999984210 122233 58999999999986
Q ss_pred ee
Q 013955 329 ER 330 (433)
Q Consensus 329 ~r 330 (433)
..
T Consensus 243 ~~ 244 (552)
T 2z1a_A 243 LG 244 (552)
T ss_dssp BS
T ss_pred cc
Confidence 53
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.8e-08 Score=101.80 Aligned_cols=185 Identities=18% Similarity=0.170 Sum_probs=92.9
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-ceEEccccccccccchh--hHHHhhhhhhhhhhC
Q 013955 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQC----KY-DVHLLPGDLSYADYMQH--RWDTFGELVQPLASA 195 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GD~~~~~~~~~--~w~~~~~~~~~l~~~ 195 (433)
...++|+.++|+|..... ...++++++. +| +++|.+||++....... ..+...+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---
Confidence 346899999999865321 2345555432 46 79999999985433211 112223334333
Q ss_pred CCceeccCCCcCCCCCcccccccccccccccCC---C----CCC-CCCCceEEEEeCe--EEEEEEcccCC--CC-C---
Q 013955 196 RPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAG--AHLIMLGSYAD--YD-E--- 259 (433)
Q Consensus 196 iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~-~~~~~~ys~~~g~--v~fi~lds~~~--~~-~--- 259 (433)
-+-+.++||||+..... .+.........|. | ..+ .....|..++.++ +.|+.+.+... +. +
T Consensus 83 g~d~~~~GNHEfd~g~~---~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~ 159 (516)
T 1hp1_A 83 GYDAMAIGNHEFDNPLT---VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYF 159 (516)
T ss_dssp TCCEEECCGGGGSSCHH---HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSC
T ss_pred CCCEEeeccccccCCHH---HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCcc
Confidence 24467899999953211 1111111111111 1 000 0113455567786 45666654321 10 0
Q ss_pred -------ChHH-HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 260 -------YSDQ-YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 260 -------~~~Q-~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
..+. .+|+++ |++. .+.+.+|+++|.|....... +........+...+...+||++|+||.|...
T Consensus 160 ~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 160 TDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp TTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred CCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 0122 233332 3321 14567999999997543221 1110111234333444569999999999764
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-07 Score=95.66 Aligned_cols=204 Identities=17% Similarity=0.170 Sum_probs=102.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCc-eEEccccccccccchhh-------HHHhhhh
Q 013955 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR-------WDTFGEL 188 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~-------w~~~~~~ 188 (433)
...++|+.++|+|..-. ....++++++.+++ ++|.+||++........ .....+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999985321 12455666666777 67789999975532110 1222222
Q ss_pred hhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCC-----CC--CCCceEEEEeCeEE--EEEEcccC--CC
Q 013955 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEES-----GS--NSNLYYSFDVAGAH--LIMLGSYA--DY 257 (433)
Q Consensus 189 ~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~-----~~--~~~~~ys~~~g~v~--fi~lds~~--~~ 257 (433)
+..+ -+-+.++||||+..... .+..+.+....|.-.. +. ....|..++.++++ ||.+.+.. .+
T Consensus 97 ln~l---g~D~~t~GNHefd~G~~---~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~ 170 (527)
T 3qfk_A 97 YNRM---AFDFGTLGNHEFNYGLP---YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHW 170 (527)
T ss_dssp HHHT---CCCEECCCGGGGTTCHH---HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGT
T ss_pred HHhc---CCcEEeccccccccCHH---HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccc
Confidence 2222 23356799999854321 1111111111111000 00 01235567788754 55555421 11
Q ss_pred CC--------ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC-CC-----CCCChhHHHHHHHHHHHcCCcEEEec
Q 013955 258 DE--------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE-AH-----QGEGDGMMAIMEPLLYAASVDLVLAG 323 (433)
Q Consensus 258 ~~--------~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~-----~~~~~~~~~~l~~l~~~~~VdlvlsG 323 (433)
.. .....+.+++.+++.+ .+.+.+|+++|.+...... .. .++. ....+..-+ ..+||++|+|
T Consensus 171 ~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~--~~~~la~~~-~~giDlIlgG 246 (527)
T 3qfk_A 171 EQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGEN--EGYAMLEAF-SKDIDIFITG 246 (527)
T ss_dssp SCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSC--CHHHHHHHH-GGGCSEEECC
T ss_pred cCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccch--HHHHHHHhc-CCCCcEEEEC
Confidence 10 1123344444444443 2466799999987543211 00 1111 111222222 2479999999
Q ss_pred CcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 324 HVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 324 H~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
|+|...... -+++..+.+|.-|..
T Consensus 247 HtH~~~~~~--------v~~~~ivqag~~g~~ 270 (527)
T 3qfk_A 247 HQHRQIAER--------FKQTAVIQPGTRGTT 270 (527)
T ss_dssp SSCCEEEEE--------ETTEEEEEECSTTSE
T ss_pred CCCcccceE--------ECCEEEeccChhhCE
Confidence 999865321 135655666665554
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=7.6e-07 Score=90.93 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=91.7
Q ss_pred CCeEEEEEecCCCCCC-------------------hHHHHHHhhcCCCceEEc-cccccccccchhhHHHhhhhhhhhhh
Q 013955 135 FPITFAVAGDLGQTGW-------------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLAS 194 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------------~~~~l~~i~~~~pd~vl~-~GD~~~~~~~~~~w~~~~~~~~~l~~ 194 (433)
..++|+.++|+|..-. ....++++++.+++.+++ +||++..... ..+......++.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~-~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-hhhcCChHHHHHHHh
Confidence 4589999999984311 123456666778887776 9999874321 111111112222222
Q ss_pred CCCceeccCCCcCCCCCcccccccccccccccCC---C----CCCC-C-CCceEEEEeCeE--EEEEEccc-----CCC-
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESGS-N-SNLYYSFDVAGA--HLIMLGSY-----ADY- 257 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~~-~-~~~~ys~~~g~v--~fi~lds~-----~~~- 257 (433)
.-+-+.++||||+..... .+..+......|. | ..+. . ...|.-++.+++ -|+.+-+. ...
T Consensus 84 lg~D~~tlGNHEfd~G~~---~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~ 160 (509)
T 3ive_A 84 MPFDAVTIGNHEFDHGWD---NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSA 160 (509)
T ss_dssp SCCSEECCCGGGGTTCHH---HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCG
T ss_pred cCCcEEeecccccccCHH---HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccccccc
Confidence 234567899999854321 1111111111111 1 0111 1 234556678874 45566321 000
Q ss_pred ---C--CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCC----CChhHHHHHHHHHHH-cCCcEEEecCccc
Q 013955 258 ---D--EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG----EGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (433)
Q Consensus 258 ---~--~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~~~l~~l~~~-~~VdlvlsGH~H~ 327 (433)
. ......+.+++.+++.+. +.+.+|+++|.+.-........ ...... ..+.++ .++|++|+||.|.
T Consensus 161 ~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHtH~ 236 (509)
T 3ive_A 161 ATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHAHV 236 (509)
T ss_dssp GGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESSCC
T ss_pred ccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCcCc
Confidence 0 012334455555555444 3667999999875322111000 001111 223333 3799999999996
Q ss_pred c
Q 013955 328 Y 328 (433)
Q Consensus 328 y 328 (433)
.
T Consensus 237 ~ 237 (509)
T 3ive_A 237 G 237 (509)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=2.3e-07 Score=95.55 Aligned_cols=176 Identities=15% Similarity=0.157 Sum_probs=92.0
Q ss_pred CCCeEEEEEecCCCCCC---------------------hHHHHHHhhcCCC-ceEEccccccccccchh--hHHHhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW---------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQH--RWDTFGELV 189 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------------------~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~--~w~~~~~~~ 189 (433)
...++|+.++|+|..-. ....++++++.+| +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45699999999985311 1234556666666 59999999997654311 112223333
Q ss_pred hhhhhCCCceeccCCCcCCCCCccccccc-ccccccccCCCCCC---C---------CCCceEEEEeCeEE--EEEEccc
Q 013955 190 QPLASARPWMVTQGNHEKESIPLIMDAFQ-SYNARWKMPFEESG---S---------NSNLYYSFDVAGAH--LIMLGSY 254 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~-~y~~~~~~p~~~~~---~---------~~~~~ys~~~g~v~--fi~lds~ 254 (433)
..+ -+-+.++||||+..... .+. .+......|.-... . ....|.-++.++++ |+.+.+.
T Consensus 103 n~l---g~d~~~~GNHEfd~g~~---~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~ 176 (546)
T 4h2g_A 103 NAL---RYDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSK 176 (546)
T ss_dssp HHH---TCSEEECCGGGGTTHHH---HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECT
T ss_pred Hhc---CCcEEeccCcccccCHH---HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEeccc
Confidence 333 23367899999853211 111 22222111110000 0 11345567788755 5555442
Q ss_pred C-----CCC---CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 255 A-----DYD---EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 255 ~-----~~~---~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
. ... ......+.+++.+++.+..+.+.+|+++|.+... ...+...+ .+||++|+||+|
T Consensus 177 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHtH 242 (546)
T 4h2g_A 177 ETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHSN 242 (546)
T ss_dssp THHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSSC
T ss_pred ccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCcC
Confidence 1 000 0012334455554444333466799999987421 11222211 379999999999
Q ss_pred cce
Q 013955 327 AYE 329 (433)
Q Consensus 327 ~y~ 329 (433)
...
T Consensus 243 ~~~ 245 (546)
T 4h2g_A 243 TFL 245 (546)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1e-06 Score=90.89 Aligned_cols=149 Identities=13% Similarity=0.051 Sum_probs=75.3
Q ss_pred HHHhhcC--C--Cc-eEEccccccccccchhhH---HHhhhhhhhhhhCCCceeccCCCcCCCCCccccccccccccccc
Q 013955 155 LDHIGQC--K--YD-VHLLPGDLSYADYMQHRW---DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKM 226 (433)
Q Consensus 155 l~~i~~~--~--pd-~vl~~GD~~~~~~~~~~w---~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~ 226 (433)
++++++. + || ++|.+||++..... ..+ ....+.+..+. .+++ + ||||+.... +.+..+.+....
T Consensus 111 v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~---~~l~~~l~~~~~ 182 (562)
T 2wdc_A 111 IRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR---ERVEELLGLFRG 182 (562)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH---HHHHHHHHHCCS
T ss_pred HHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH---HHHHHHHHhCCC
Confidence 4444443 3 88 89999999975442 112 22333444442 6665 6 999985321 112222221221
Q ss_pred CCCC-------CC-CCCCceEEEEeCe--EEEEEEcccC-------------CCCCChHHHHHHHHHhhccccCCCCeEE
Q 013955 227 PFEE-------SG-SNSNLYYSFDVAG--AHLIMLGSYA-------------DYDEYSDQYRWLKDDLSKVDRKKTPWLL 283 (433)
Q Consensus 227 p~~~-------~~-~~~~~~ys~~~g~--v~fi~lds~~-------------~~~~~~~Q~~WL~~~L~~~~~~~~~~~i 283 (433)
|.-. .+ .....|-.++.++ +.|+.+.+.. .+....+..+-..+.|++ .+.+.+|
T Consensus 183 p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iI 259 (562)
T 2wdc_A 183 EFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVV 259 (562)
T ss_dssp EECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEE
T ss_pred CEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEE
Confidence 2100 01 0112445567777 5566665421 011112333222233433 2456799
Q ss_pred EEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccce
Q 013955 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (433)
Q Consensus 284 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 329 (433)
+++|.|... .. .+.++ .+||++|+||.|...
T Consensus 260 vLsH~g~~~------------d~---~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 260 LLSHNGMQL------------DA---ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEECSCHHH------------HH---HHHTTSSSCCEEEECSSCCCC
T ss_pred EEeCCCCcc------------hH---HHHhcCCCCcEEEeCCCCCCC
Confidence 999998421 01 22333 489999999999864
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.9e-07 Score=91.79 Aligned_cols=174 Identities=14% Similarity=0.138 Sum_probs=90.3
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHhhcCCCc-eEEccccccccccchh--hHHHhhhhh
Q 013955 135 FPITFAVAGDLGQTGWT----------------------KSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELV 189 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~----------------------~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~--~w~~~~~~~ 189 (433)
-.++|+.++|+|..-.. ...++++++.+++ ++|.+||++....... ......+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 35899999999843211 2345555555666 8999999997653211 112222333
Q ss_pred hhhhhCCCceeccCCCcCCCCCcccccccccccccccCC---C---CCCC----CCCceEEEEeCe--EEEEEEcc-c--
Q 013955 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESGS----NSNLYYSFDVAG--AHLIMLGS-Y-- 254 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~---~~~~----~~~~~ys~~~g~--v~fi~lds-~-- 254 (433)
..+ -+-+.++||||+.... +.+..+.+....|. | ..+. .-..|--++.++ +-||.+.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~---~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~ 164 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN---EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKT 164 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH---HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHH
T ss_pred Hhc---CcCeeeccccccccCH---HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCcc
Confidence 332 2345689999985321 11222222111121 0 0011 012455567887 45666633 1
Q ss_pred ---CCCCC---ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCccc
Q 013955 255 ---ADYDE---YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (433)
Q Consensus 255 ---~~~~~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~ 327 (433)
..... .....+-+++.+++.+..+.+.+|+++|.+... ...+ .++ -+||++|+||+|.
T Consensus 165 ~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~l---a~~~~giDlIlgGHtH~ 229 (579)
T 3ztv_A 165 VNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIEI---AQKVNDIDVIVTGDSHY 229 (579)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHHH---HHHCSSCCEEEECSSCC
T ss_pred ccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHH---HHhCCCCCEEEeCCCCc
Confidence 11001 122334455555444433466799999987421 1122 222 3799999999998
Q ss_pred ce
Q 013955 328 YE 329 (433)
Q Consensus 328 y~ 329 (433)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 65
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.2e-07 Score=86.05 Aligned_cols=68 Identities=28% Similarity=0.204 Sum_probs=44.5
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
....+++++||+|.... ..++++.+.. .++|.++++||+++.+.... ...+. +. ..+++.+.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~~~~~---l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLEL---IT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGG---GG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---HHHHH---Hh-cCCEEEEccCcHHH
Confidence 34578999999985421 2244455543 47999999999997654321 11222 22 25899999999973
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.36 E-value=1e-05 Score=83.10 Aligned_cols=181 Identities=14% Similarity=0.122 Sum_probs=88.9
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhh----cCCCc-eEEccccccccccchh----hHHHhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQ 190 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~l~~i~----~~~pd-~vl~~GD~~~~~~~~~----~w~~~~~~~~ 190 (433)
...++|+.++|+|..-. ..++...++ +.+++ ++|.+||++....... ......+.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 56899999999986421 112222332 36788 5799999996543211 1111122222
Q ss_pred hhhhCCCceeccCCCcCCCCCcccccccccccccccCC---C-----CCCC---CCCceEEEEe--CeEE--EEEEcccC
Q 013955 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----ESGS---NSNLYYSFDV--AGAH--LIMLGSYA 255 (433)
Q Consensus 191 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~-----~~~~---~~~~~ys~~~--g~v~--fi~lds~~ 255 (433)
.+ -.=+.++||||+.........+....+....|. | ..+. ....|.-++. ++++ ||.+.+..
T Consensus 93 ~l---g~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~ 169 (557)
T 3c9f_A 93 KQ---DYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDF 169 (557)
T ss_dssp TS---CCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCC
T ss_pred hc---CCCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCC
Confidence 22 233568999999642110001111111111121 1 0010 1123556777 7654 55554321
Q ss_pred CCC------CChHH--H-HHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH--cCCcE-EEec
Q 013955 256 DYD------EYSDQ--Y-RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL-VLAG 323 (433)
Q Consensus 256 ~~~------~~~~Q--~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~Vdl-vlsG 323 (433)
... ....+ . +|+++.+++ +.+.+|+++|.+..... .. . ......+.+ .++|+ +|.|
T Consensus 170 ~~~~~~~~~~d~~e~i~~~~v~~l~~~----~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilIlgG 237 (557)
T 3c9f_A 170 KRFNSGTRVTPMAETIHEPWFQEALKH----EVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQYFGG 237 (557)
T ss_dssp CCCCTTEEECCHHHHTTSHHHHHHTTS----CCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCCCCcEECCHHHHHHHHHHHHHHhc----CCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEEECC
Confidence 100 01112 1 466655532 56779999999863110 01 1 222222333 48995 9999
Q ss_pred Ccccce
Q 013955 324 HVHAYE 329 (433)
Q Consensus 324 H~H~y~ 329 (433)
|.|...
T Consensus 238 HtH~~~ 243 (557)
T 3c9f_A 238 HSHIRD 243 (557)
T ss_dssp SSCCEE
T ss_pred CCCCCC
Confidence 999873
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-05 Score=74.11 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=97.0
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 137 ITFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
+|++++||.= +... ...++++++.. |++|..|+.+..+.... ....+.+..+ .+-+ .++||||+... .
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~--G~Da-~TlGNHefD~~-~ 72 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEA--GAGC-LTLGNHAWHHK-D 72 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHH--TCSE-EECCTTTTSST-T
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhC--CCCE-EEeccccccCc-h
Confidence 5899999982 2112 34556666566 99999888876542211 1222223222 2444 46799999642 1
Q ss_pred cccccccccc----ccccCCCC--CCCCCCceEEEEeCeEE--EEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEE
Q 013955 213 IMDAFQSYNA----RWKMPFEE--SGSNSNLYYSFDVAGAH--LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (433)
Q Consensus 213 ~~~~~~~y~~----~~~~p~~~--~~~~~~~~ys~~~g~v~--fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (433)
...+.+ +.-.|.|- .+..+..|.-++.++.+ ++.|-+.........-.+-+++.+++. +.+.+||
T Consensus 73 ----l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~IIv 145 (255)
T 1t70_A 73 ----IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFV 145 (255)
T ss_dssp ----HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEE
T ss_pred ----HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEEE
Confidence 111111 11123221 12223556667887744 555544321112222344466666655 4567999
Q ss_pred EecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCC
Q 013955 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGN 354 (433)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 354 (433)
.+|.-. ....+.+.. .-..+||+++.||+|.......+. ++|+.|++ .|..|.
T Consensus 146 ~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~d~G~~G~ 199 (255)
T 1t70_A 146 DFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQTDAGFTGP 199 (255)
T ss_dssp EEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEESCCCCBEE
T ss_pred EeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEEcCccccc
Confidence 999521 111222322 223469999999999864432221 36888876 244343
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-05 Score=74.39 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=97.3
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 135 FPITFAVAGDLGQTGW---TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~---~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
..+|++++||++...- ....++++++. ++|+++..||.+..+... .....+.+..+ .+- ..++||||++..
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~--G~D-a~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEA--GVN-YITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHH--TCC-EEECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhc--CCC-EEEEccCcccCC
Confidence 3589999999963211 12344555443 689999999998655321 12222233322 233 347899999653
Q ss_pred Ccccccccc---cccccccCCCCCCC-CCCceEEEEeCeEE--EEEEcccCCCC--CChHHHHHHHHHhhccccCCCCeE
Q 013955 211 PLIMDAFQS---YNARWKMPFEESGS-NSNLYYSFDVAGAH--LIMLGSYADYD--EYSDQYRWLKDDLSKVDRKKTPWL 282 (433)
Q Consensus 211 ~~~~~~~~~---y~~~~~~p~~~~~~-~~~~~ys~~~g~v~--fi~lds~~~~~--~~~~Q~~WL~~~L~~~~~~~~~~~ 282 (433)
+... .+-. ....-+.|...... .+..|.-++.++++ ++.+-+...+. ....-.+.+++.++ +.+.+.+
T Consensus 78 ~~~~-~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~~diI 153 (281)
T 1t71_A 78 LDLA-VVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRDCDLH 153 (281)
T ss_dssp GGHH-HHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCCCSEE
T ss_pred ccHH-HHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcCCCEE
Confidence 1110 0100 01111222211000 23456667887744 55554432122 12223445666665 2367789
Q ss_pred EEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE
Q 013955 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (433)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~ 348 (433)
||.+|.-. ....+.+.. .-..+||+++.||+|.......+. ++|+.|++
T Consensus 154 Iv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~il-----~~gt~~i~ 202 (281)
T 1t71_A 154 IVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYIT 202 (281)
T ss_dssp EEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEES
T ss_pred EEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEe-----cCCcEEEe
Confidence 99999521 111222322 223469999999999864332221 46888876
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-05 Score=73.55 Aligned_cols=187 Identities=18% Similarity=0.237 Sum_probs=96.2
Q ss_pred eEEEEEecC-CCCC--ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 137 ITFAVAGDL-GQTG--WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 137 ~~f~~~gD~-~~~~--~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
+|++++||. |..+ .....++++++.. |++|..|..+..+.... ....+.+..+ .+-++ +.|||+++.. .
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~--G~D~~-T~GNHefD~~-~- 72 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREA--GVDLV-SLGNHAWDHK-E- 72 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHH--TCCEE-ECCTTTTSCT-T-
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhC--CCCEE-EeccEeeECc-h-
Confidence 589999998 2111 1234566666666 99888777664433211 2222223222 24554 7899999653 1
Q ss_pred cccccccccc--cccCCCC-CCCCCCceEEEEeCeEEEEEEc--ccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 214 MDAFQSYNAR--WKMPFEE-SGSNSNLYYSFDVAGAHLIMLG--SYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 214 ~~~~~~y~~~--~~~p~~~-~~~~~~~~ys~~~g~v~fi~ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
...+.+. .-.|.|- .+..+..|.-++.++.++-+++ ..........-.+-+++.+++.+ .+.+||.+|.
T Consensus 73 ---l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H~ 146 (252)
T 2z06_A 73 ---VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVHA 146 (252)
T ss_dssp ---HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEEC
T ss_pred ---HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeCC
Confidence 1111111 1122221 1122356677888876655554 32211111222333555555542 5679999996
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGN 354 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 354 (433)
-. ....+.+.. .-..+||+|+-||+|.......+. ++|+.|++ .|..|.
T Consensus 147 g~-----------tsek~~la~-~~dg~Vd~VvGgHTHv~t~d~~il-----~~gt~~itd~G~~G~ 196 (252)
T 2z06_A 147 EA-----------TSEKMALAH-YLDGRASAVLGTHTHVPTLDATRL-----PKGTLYQTDVGMTGT 196 (252)
T ss_dssp SC-----------HHHHHHHHH-HHBTTBSEEEEESSCSCBSCCEEC-----TTSCEEESCCCCBEE
T ss_pred Cc-----------HHHHHHHHH-hCCCCeEEEEcCCCCcCCCccEEc-----CCCcEeecCCccccc
Confidence 32 111122222 233469999999999864332222 46888886 243343
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.2e-05 Score=74.57 Aligned_cols=60 Identities=13% Similarity=0.230 Sum_probs=32.5
Q ss_pred HHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 266 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
-+++.+++.+.++.+.+|+++|............+. ....|..-+ -++|++|.||.|...
T Consensus 195 ~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 195 SANETIPKMKAEGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeccCccccccccccch--hHHHHHhcC--CCCcEEEECCCCccC
Confidence 344444333333577899999987643221111111 111222212 479999999999853
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00022 Score=68.53 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=41.5
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCc-eEEccccccccccchhhHHHhh--------hh
Q 013955 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFG--------EL 188 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~w~~~~--------~~ 188 (433)
-.++|+..+|+|..-. ....++++++..++ ++|..||++..... ..+.... ..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 3588999999985321 12345666666665 77899999965432 1121110 01
Q ss_pred hhhhhhCCCceeccCCCcCCC
Q 013955 189 VQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 189 ~~~l~~~iP~~~v~GNHD~~~ 209 (433)
++.+..--.=+.++||||+..
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTT
T ss_pred HHHHHhcCCCEEecchhhhhc
Confidence 122221122355789999964
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00053 Score=70.20 Aligned_cols=170 Identities=16% Similarity=0.127 Sum_probs=84.4
Q ss_pred CeEEEEEecCCCCCC---------------------hHHHHHHhhcCCCc-eEEccccccccccchhh--HHHhhhhhhh
Q 013955 136 PITFAVAGDLGQTGW---------------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR--WDTFGELVQP 191 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~---------------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~--w~~~~~~~~~ 191 (433)
.++|+..+|+|..-. ....++++++.+++ ++|..||++........ .....+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999974210 12344555555665 67779999976543111 1111222222
Q ss_pred hhhCCCceeccCCCcCCCCCcccccc-cccccccccCC---CC--C-------CCCCCceEEEEeCeEE--EEEEcccC-
Q 013955 192 LASARPWMVTQGNHEKESIPLIMDAF-QSYNARWKMPF---EE--S-------GSNSNLYYSFDVAGAH--LIMLGSYA- 255 (433)
Q Consensus 192 l~~~iP~~~v~GNHD~~~~~~~~~~~-~~y~~~~~~p~---~~--~-------~~~~~~~ys~~~g~v~--fi~lds~~- 255 (433)
+ -.=..++||||+..... .+ ..+.+....|. |- . ...-..|--++.++++ ||.+-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~---~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~ 156 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKET 156 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH---HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTH
T ss_pred c---CCCEEEEchhhhccCHH---HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccce
Confidence 2 22355899999964321 11 11111111121 10 0 0011345567788755 55554421
Q ss_pred ----CC------CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecC
Q 013955 256 ----DY------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGH 324 (433)
Q Consensus 256 ----~~------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH 324 (433)
.. ...-+..+...+.|++ .+.+.+|+++|.... .-. .+.++. ++|++|.||
T Consensus 157 ~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~IlgGH 218 (530)
T 4h1s_A 157 PFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVVVGGH 218 (530)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEEECCS
T ss_pred eeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCeeccCC
Confidence 00 1112223333333443 256679999997521 111 223333 799999999
Q ss_pred cccce
Q 013955 325 VHAYE 329 (433)
Q Consensus 325 ~H~y~ 329 (433)
+|..-
T Consensus 219 sH~~~ 223 (530)
T 4h1s_A 219 SNTFL 223 (530)
T ss_dssp SCCCB
T ss_pred cccee
Confidence 99753
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00091 Score=54.15 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=60.0
Q ss_pred ccCCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEE
Q 013955 32 EFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (433)
Q Consensus 32 ~~~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
+.+....+...|..|++.-.+.+++.|.|....... .-.|+|.......... ... ......
T Consensus 11 ~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~--------~~~---~~~~~~ 79 (123)
T 2edd_A 11 SVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKY--------KSE---DTTSLS 79 (123)
T ss_dssp SCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCC--------CCE---EESSSE
T ss_pred CCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccE--------EEE---eCCceE
Confidence 345556777899999998778999999999653221 4467787653211100 000 001335
Q ss_pred EEeCCCCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 104 TVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
++|+||+|+|.|.++|.. .|....|+|.+.
T Consensus 80 ~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 80 YTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred EEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 789999999999999964 356778888663
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0011 Score=52.38 Aligned_cols=87 Identities=21% Similarity=0.264 Sum_probs=56.8
Q ss_pred CCCCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCC--CeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 37 PKPSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
..+...|..+.+... +.+++.|.|....... .-.|+|....... .+.... .......+.|++
T Consensus 6 ~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~ 75 (114)
T 2ede_A 6 SGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET----------ISGDRLTHQIMD 75 (114)
T ss_dssp CCCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE----------EETTCCEEEECS
T ss_pred CCCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE----------ECCCceEEEEcC
Confidence 355678999988877 6789999999774322 3456676543211 111110 112234578999
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|+|++.|.+||.. .|....|+|++.
T Consensus 76 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 76 LNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp CCSSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 9999999999964 256678888664
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00099 Score=52.83 Aligned_cols=90 Identities=11% Similarity=0.137 Sum_probs=56.7
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..+...|..+.+...+.+++.|.|..... ...-.|+|.............. ...+....++|++|
T Consensus 5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L 76 (114)
T 1x4y_A 5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHL 76 (114)
T ss_dssp CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSC
T ss_pred ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--------ecCCcEeEEEcCCC
Confidence 345667899998887779999999997741 1224566755432210000000 00111235789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
+|+|.|.++|.. .|+...++|.+.
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 77 QPETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp CTTCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 999999999964 256778888654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0017 Score=50.68 Aligned_cols=86 Identities=19% Similarity=0.157 Sum_probs=52.8
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
.|+. |..+.+...+.+ +.|.|....... .-.|+|........ ...-. . . ...+....++|++|+|+
T Consensus 6 ~P~~-P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~-~~~~~----~-~-~~~~~~~~~~i~~L~p~ 76 (105)
T 2haz_A 6 TPSS-PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVW-HSKWY----D-A-KEASMEGIVTIVGLKPE 76 (105)
T ss_dssp CCCC-CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCC-EEEEE----E-H-HHHHHHSEEEECSCCTT
T ss_pred CCcC-CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCC-ccceE----E-c-cccCCccEEEECCCCCC
Confidence 4444 888887766666 999999764321 23567766543211 10000 0 0 01112345689999999
Q ss_pred CEEEEEecc--------cCCeeEEECCC
Q 013955 113 TVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+.|.+||.. .|+...|+|.|
T Consensus 77 t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 77 TTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 999999964 25677888876
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00064 Score=54.18 Aligned_cols=84 Identities=17% Similarity=0.195 Sum_probs=54.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.+...|..|++...+.+++.|+|.-..... .-.|+|......... +.. .......+.|+||
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~--------~~~---~~~~~~~~~i~gL 75 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--------YKN---ANATTLSYLVTGL 75 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--------CEE---CCBCSSEEEEESC
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE--------EEE---EecCcCEEEeCCC
Confidence 456689999999888999999998654221 345677653111000 000 1112345789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|+|.|.++|.. .|....++|.+
T Consensus 76 ~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~ 106 (113)
T 1x5j_A 76 KPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106 (113)
T ss_dssp CTTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred CCCcEEEEEEEEecCCccCCCcccEEeeccC
Confidence 999999999864 24566777755
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0047 Score=49.06 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=55.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCC-CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDD-ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
...|..+++...+.+++.|.|.... .. ..-.|+|............ ........+.|++|+|++.
T Consensus 18 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 87 (120)
T 1x5f_A 18 PSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATV 87 (120)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCE
T ss_pred CCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----------eccCCccEEEeCCCCCCCE
Confidence 3578999888778999999998764 22 2245677665322111100 0112244578999999999
Q ss_pred EEEEecc--------cCCeeEEECCCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|.+||.. .+....|+|.+.
T Consensus 88 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 88 YIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 9999964 256677888653
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.28 E-value=9.9e-05 Score=68.43 Aligned_cols=65 Identities=17% Similarity=0.125 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCC-ceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.+...++ |.+|++||+++.+.... + ..+.+. ..+++.++||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~-~l~~l~----~~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--G-VVRLLK----RLGAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--H-HHHHHH----HHTCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--H-HHHHHH----HCCCEEEeCcChHH
Confidence 48999999984311 2344555555555 99999999998654321 1 122222 24899999999973
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00053 Score=53.05 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=51.3
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC--CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD--ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.++..|..+++...+.+++.|.|.... .. ..-.|+|............+ ....+.|+||+|
T Consensus 7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p 73 (103)
T 2edy_A 7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKP 73 (103)
T ss_dssp CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCT
T ss_pred CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCC
Confidence 455678888777666899999999872 11 22356666554321111111 122357899999
Q ss_pred CCEEEEEecc--------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++.|.++|.. .|....|+|.|
T Consensus 74 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 74 DTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp TCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 9999999964 24555666654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0035 Score=48.71 Aligned_cols=74 Identities=15% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCC--CeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.|+..|..+.+...+++++.|+|..... ...-.|.|....... ..... . ..+....+.|++|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~----~------v~~~~~~~~l~~L 72 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD----V------VEGSKQWHMIGHL 72 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE----E------EETTCSEEEECSC
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE----E------EcCCceEEECCCC
Confidence 4677899998887789999999987642 122367787654321 11100 0 0111224689999
Q ss_pred CCCCEEEEEecc
Q 013955 110 EHDTVYFYRCGR 121 (433)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (433)
+|+|.|.++|..
T Consensus 73 ~p~t~Y~v~V~A 84 (102)
T 3n1f_C 73 QPETSYDIKMQC 84 (102)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 999999999964
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00025 Score=66.28 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
++++++||+|.... ..++++.+.. .++|.++++||+++.+.... ...+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 46899999985421 2344455544 57899999999998665321 1222333332 3799999999973
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=50.98 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=51.2
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.+++.|.|....... .-.|+|............+ . ...+.|++|+|++.|
T Consensus 8 P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~v~~L~p~t~Y 74 (106)
T 1x4x_A 8 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-----------P--GLSYEIKGLSPATTY 74 (106)
T ss_dssp CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-----------S--CSEEEEESCCSSCEE
T ss_pred cCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-----------C--cceEEEcCCCCCCEE
Confidence 3467777777667899999998764322 2356665543221111111 1 124678899999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|||.. .|+...++|++.
T Consensus 75 ~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 75 YCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 999964 256678888653
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0019 Score=50.40 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+++...+.+++.|.|.-...... -.|+|............ .......+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----------ARSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----------EEESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----------EecCccEEEEcCCCCCCEEEE
Confidence 677777777778999999988744332 24555554322111100 001123467899999999999
Q ss_pred Eecc--------cCCeeEEECCCC
Q 013955 118 RCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p~ 133 (433)
||.. .|....|+|++.
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9964 356778888775
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0028 Score=50.48 Aligned_cols=88 Identities=19% Similarity=0.229 Sum_probs=55.4
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
+..+...|..+++...+.+++.|.|..... ...-.|+|........... .. ...+....+.|+||+|++
T Consensus 15 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~-----~~----~~~~~~~~~~i~~L~p~t 85 (119)
T 2ee2_A 15 QDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN-----RV----QVTSQEYSARLENLLPDT 85 (119)
T ss_dssp SCCCCCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE-----EE----EEETTCSEEEECSCCTTC
T ss_pred CcCCCCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcE-----EE----EcCCCEeEEEECCCCCCC
Confidence 345666787888877779999999987742 2234566755432111000 00 011223457899999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.++|.. .|....|+|.+
T Consensus 86 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ee2_A 86 QYFIEVGACNSAGCGPPSDMIEAFTKK 112 (119)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999964 24567788854
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.003 Score=49.22 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=47.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+...|..+++...+.+++.|.|.-......-.|+|............ .. ...+. .+.|+||+|+|.|.++
T Consensus 8 ~~~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~----~~----~~~~~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 8 PLPPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER----EV----QVGRP--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp SCCCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE----EE----EESSS--EEEEESCCTTCCEEEE
T ss_pred CCCCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE----EE----ecCCC--EEEECCCCCCCEEEEE
Confidence 44578899888888999999997664333345677654322111000 00 01122 6889999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 78 V~A 80 (104)
T 2dkm_A 78 VQS 80 (104)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0063 Score=48.14 Aligned_cols=84 Identities=17% Similarity=0.266 Sum_probs=53.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
....|..+.+...+.+++.|.|.-...... -.|+|............ ........+.|++|+|++.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 17 LPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp SCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSSE
T ss_pred CCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCCE
Confidence 345788888887789999999987643322 24455544322111100 1112244578999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.+||.. .|+...++|.+
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQP 112 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCC
Confidence 9999864 25667788865
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0076 Score=46.88 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=51.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|+|.-.... ..-.|+|........... . ...+....+.|+||+||+.|.++|
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~------~----~v~~~~~~~~l~~L~p~t~Y~~~V 73 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTT------I----DLTEDENQYSIGNLKPDTEYEVSL 73 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE------E----EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEE------E----EcCCCcCEEEeCCCCCCCEEEEEE
Confidence 47889988877799999999866422 223567765432111110 0 011223456899999999999998
Q ss_pred ccc-------CCeeEEECCC
Q 013955 120 GRQ-------GPEFEFKTPP 132 (433)
Q Consensus 120 ~~~-------s~~~~F~T~p 132 (433)
... .....|+|.+
T Consensus 74 ~A~~~~g~s~p~~~~~~T~~ 93 (104)
T 2rb8_A 74 ISRRGDMSSNPAKETFTTGL 93 (104)
T ss_dssp EEEETTEECCCEEEEEECCC
T ss_pred EEEeCCccCCCEEEEEECCC
Confidence 641 2235678765
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0077 Score=46.42 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=47.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|+|.-+... ..-.|+|............ ........++|+||+|+|.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 3 QPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV----------DLTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE----------EECTTEEEEEECSCCTTCEEEEEE
T ss_pred ccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE----------EECCcceEEEECCCCCCCEEEEEE
Confidence 46888988877799999999876432 2346777655422111100 012334567899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0086 Score=46.61 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=50.6
Q ss_pred CCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~--~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+.+.. .+.+++.|.|.-...... -.|+|............ ... ..+.|++|+|++.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~--~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AAS--NFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ESS--SEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CCc--cEEEeCCCCCCCEE
Confidence 788888776 358899999998753222 34556554432111111 111 25789999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.+||.. .|+...++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999964 25667788854
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0066 Score=47.07 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=51.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+++...+.+++.|.|...... ..-.|+|............ .. ...+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 7889988877789999999977422 2235666654432111110 01 23467899999999999
Q ss_pred Eecc--------cCCeeEEECCC
Q 013955 118 RCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p 132 (433)
||.. .|....++|..
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9964 24567788754
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0071 Score=48.02 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=57.3
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..+...|..+++...+.+++.|.|..... ...-.|+|............-. . ....+....+.|++|
T Consensus 12 ~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~i~~L 85 (122)
T 1va9_A 12 EAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV----E--MKATGDSEVYTLDNL 85 (122)
T ss_dssp CCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC----B--CCCCSSEEEEEEESC
T ss_pred CCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEE----E--EecCCceeEEEeCCC
Confidence 345566788999887779999999998753 1223566765542211000000 0 011234567789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|++.|.++|.. .|....|+|.+
T Consensus 86 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 86 KKFAQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp CSSCCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred CCCCEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 999999999964 24556777754
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0032 Score=49.28 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=51.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.....+++.|.|....... .-.|+|............ .......+.|++|+|++.|.
T Consensus 12 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 80 (111)
T 1x5l_A 12 SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYV 80 (111)
T ss_dssp CCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEE
T ss_pred CCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----------ecCCCCEEEEcCCCCCCEEE
Confidence 357777766566899999998764322 235667655321111000 01112356789999999999
Q ss_pred EEecc--------cCCeeEEECCCC
Q 013955 117 YRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p~ 133 (433)
+||.. .|....|+|++.
T Consensus 81 ~~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 81 FQVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp ECEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEEeCCcCCCCcccEEEEcCCC
Confidence 99964 356788888765
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0044 Score=47.87 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=51.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+.+...+.++++|.|..... ...-.|+|........+.... ......+.|++|+|++.|.||
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~~ 77 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD-----------GVATTRYSIGGLSPFSEYAFR 77 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC-----------CCCSSEEEEESCCTTCEEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc-----------CCCccEEEEeCCCCCcEEEEE
Confidence 4788888887678999999997631 123456676554321111100 011223578899999999999
Q ss_pred ecc--------cCCeeEEECCC
Q 013955 119 CGR--------QGPEFEFKTPP 132 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p 132 (433)
|.. .|....++|.+
T Consensus 78 V~A~n~~G~~~~S~~~~~~T~~ 99 (106)
T 2dju_A 78 VLAVNSIGRGPPSEAVRARTGE 99 (106)
T ss_dssp EEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEeCCccCCCcccEEeEcCC
Confidence 964 24566777765
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.004 Score=49.15 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=52.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++...+.+++.|.|...... ..-.|+|............. ....+.|++|+|++.|
T Consensus 18 P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y 84 (116)
T 1x5g_A 18 PGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEY 84 (116)
T ss_dssp CCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEE
T ss_pred CcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEE
Confidence 347788888877799999999876322 23456676554322211111 1235678999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.+||.. .|....|+|.+
T Consensus 85 ~~~V~A~n~~G~g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 85 SFRVVAYNKHGPGVSTPDVAVRTLS 109 (116)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECCC
T ss_pred EEEEEEEcCCCcCCCCCCEEEECCC
Confidence 999964 24566788865
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0047 Score=48.28 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=49.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
..|....+.-.+.++++|.|...... ..-.|+|........+..... .. ...++|++|+|++.|
T Consensus 9 ~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y 77 (109)
T 1x5x_A 9 SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKY 77 (109)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEE
T ss_pred cCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEE
Confidence 34555556666789999999876432 223566765443212211100 11 224678899999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.|||.. .|....++|.+
T Consensus 78 ~frV~A~n~~G~s~~S~~~~~~T~~ 102 (109)
T 1x5x_A 78 KFKVIAYNSEGKSNPSEVVEFTTCP 102 (109)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCcCCccCEEeEeCC
Confidence 999964 24566777765
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.011 Score=47.56 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=49.2
Q ss_pred CCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccC--CCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSP--GGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
.+.......|..+.+...+.++++|.|.-..... .-.|+|.... ....+...... ........++|+
T Consensus 12 ~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~-------~~~~~~~~~~v~ 84 (124)
T 1wis_A 12 GVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL-------SNEPDARSMEVP 84 (124)
T ss_dssp CCCCCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE-------ESCTTCSEEEEC
T ss_pred cCCCCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE-------ccCCCceEEEeC
Confidence 3334456789999888777999999996543222 2456676521 11122111110 011223457889
Q ss_pred CCCCCCEEEEEecc
Q 013955 108 PLEHDTVYFYRCGR 121 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (433)
+|+|++.|.|||..
T Consensus 85 ~L~p~t~Y~frV~A 98 (124)
T 1wis_A 85 DLNPFTCYSFRMRQ 98 (124)
T ss_dssp SCCTTSEECCCCEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999964
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0047 Score=49.36 Aligned_cols=84 Identities=14% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+.....+++.|.|..... . ..-.|+|........... .......+.|++|+
T Consensus 26 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~ 93 (124)
T 2ed9_A 26 DVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLE 93 (124)
T ss_dssp CCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCC
T ss_pred CCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCC
Confidence 34555788888877778999999987743 1 123566665543221110 12223456789999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.++|.. .|....|+|+.
T Consensus 94 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 94 KGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999999964 25667788764
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0072 Score=47.27 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=48.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.-.+.+++++.|....... .-.|+|..... .... . .....++|+||+|||.|.
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~-----------~--~~~t~~~i~gL~PgT~Y~ 73 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNL-----------N--VSEPRAVIPGLRSSTFYN 73 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEE-----------E--ESSSEEECCSCCSSCEEE
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEE-----------c--CCCCEEEECCCCCCCEEE
Confidence 356677777677999999998664332 24566654321 0000 0 112357899999999999
Q ss_pred EEeccc-------CCeeEEECCCC
Q 013955 117 YRCGRQ-------GPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~~-------s~~~~F~T~p~ 133 (433)
++|... +....++|.|.
T Consensus 74 ~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 74 ITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEEECCcccCCeeEEEEccCC
Confidence 998641 23456677653
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0014 Score=63.19 Aligned_cols=72 Identities=13% Similarity=-0.035 Sum_probs=44.1
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc--------CCCceEEccccccccccchhhHHHhhhhhhhhh-----hCCCce
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-----SARPWM 199 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~--------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-----~~iP~~ 199 (433)
....+++++||+|.... ...+++.+.. .++|.+|++||+++.+....+ ....+..+. ...+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 45689999999985421 1233333321 157999999999987654221 122222221 224689
Q ss_pred eccCCCcCC
Q 013955 200 VTQGNHEKE 208 (433)
Q Consensus 200 ~v~GNHD~~ 208 (433)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999973
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0098 Score=48.07 Aligned_cols=88 Identities=22% Similarity=0.211 Sum_probs=53.8
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcC--CCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITD--DESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~--~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..++..|..+++...+.+++.|.|... ..... -.|+|........... ... ........++|++|+
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~ 87 (134)
T 2edx_A 16 STPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH-----VVD---GISREHSSWDLVGLE 87 (134)
T ss_dssp SCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE-----EEC---CCBTTCSEEEEESCC
T ss_pred CCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE-----EEE---eeCCCccEEEeCCCC
Confidence 355567889988877789999999987 22222 2344544332111000 000 012334567889999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.+||.. .|....++|.+
T Consensus 88 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 88 KWTEYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp TTCEEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 99999999964 24556788754
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0045 Score=48.48 Aligned_cols=80 Identities=14% Similarity=0.193 Sum_probs=52.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCC--CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+++...+.+++.|.|.-..... .-.|+|....+. ....... ... ..+.|++|+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK----------TSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEE----------ESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEc----------cCC--CEEEECCCCCCCeE
Confidence 47788888777999999998764322 245667655411 1111110 111 25788999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.+||.. .|+...|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999964 256678888764
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0054 Score=49.50 Aligned_cols=84 Identities=12% Similarity=0.179 Sum_probs=53.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++...+.+++.|.|....... .-.|+|............ . ........+.|++|+|++.|.
T Consensus 29 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y~ 99 (130)
T 1wfo_A 29 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--------VLAPSARQYTATGLKPESVYL 99 (130)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--------EECTTCCEEEEESCCSSSEEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--------EeCCCceEEEEcCCCCCCEEE
Confidence 478888888778999999998764322 335666654322110000 0 112234557889999999999
Q ss_pred EEecc--------cCCeeEEECCCC
Q 013955 117 YRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p~ 133 (433)
+||.. .+....|+|.+.
T Consensus 100 ~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 100 FRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEeCCcCCCCcccEEEecCCC
Confidence 99964 245567888653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0049 Score=48.29 Aligned_cols=78 Identities=18% Similarity=0.297 Sum_probs=49.2
Q ss_pred CCCceEEEEecCCCcEEEEE--EcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 41 SHPQQVHISLAGDSHMRVTW--ITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W--~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
..|..+++...+.+++.|.| ....... .-.|+|.... . . ..+... ... ++|+||+|+|.|
T Consensus 11 ~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~---~-----~-~~~~~~---~~~---~~i~~L~p~t~Y 75 (107)
T 1x5a_A 11 LSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQD---E-----E-WHQMVL---EPR---VLLTKLQPDTTY 75 (107)
T ss_dssp CCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSS---C-----E-EEEEES---SSE---EEEESCCSSCEE
T ss_pred CCCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCC---C-----C-ceEEEe---cce---EEECCCCCCCEE
Confidence 35667777767799999999 6553322 2345565431 0 0 011111 111 789999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.+||.. .|....|+|.+.
T Consensus 76 ~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 76 IVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEECCC
Confidence 999964 356678888765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0015 Score=61.76 Aligned_cols=69 Identities=20% Similarity=0.188 Sum_probs=43.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.+.....+.++++||+++.+....+ ....+..+... -.++.+.||||..
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 56899999985421 2334454445567889999999987654221 12233333222 3489999999985
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0056 Score=48.58 Aligned_cols=88 Identities=18% Similarity=0.289 Sum_probs=53.3
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEe----ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYG----TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
+..+...|..+++...+.+++.|.|............|. ........ . +.. ........+.|++|+|
T Consensus 15 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~---~~~--~~~~~~~~~~i~~L~p 85 (121)
T 2dlh_A 15 EQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVN----N---WMK--HNVADSQITTIGNLVP 85 (121)
T ss_dssp CCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTT----T---SCC--CCCSSCSEECCBSCCS
T ss_pred CcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCcc----c---cEE--EecCCceEEEecCCCC
Confidence 345556888888876678999999998754333333443 32211000 0 000 0011233568899999
Q ss_pred CCEEEEEecc--------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++.|.+||.. .|+...|+|.+
T Consensus 86 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 114 (121)
T 2dlh_A 86 QKTYSVKVLAFTSIGDGPLSSDIQVITQT 114 (121)
T ss_dssp SCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEeCCccCCCCCCEEEECCC
Confidence 9999999964 24567888865
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.01 Score=58.91 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=80.2
Q ss_pred CCCeEEEEEecCCCCCCh---HH----HHHHhh-----------cCCCceEEccccccccccc-----------------
Q 013955 134 QFPITFAVAGDLGQTGWT---KS----TLDHIG-----------QCKYDVHLLPGDLSYADYM----------------- 178 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~----~l~~i~-----------~~~pd~vl~~GD~~~~~~~----------------- 178 (433)
.....+++++|+|.+... .. .++.+. ..++.-+|++||.+...+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456789999999887652 11 223332 2468899999999876422
Q ss_pred --hhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCC-CCCCCCCceEEEEeCeEEEEEEcccC
Q 013955 179 --QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA 255 (433)
Q Consensus 179 --~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~ 255 (433)
....+.+.+++..+...+|+..+|||||-.....-+..+.. ..|..... ..-..-...|.+++++++|++.....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqn 355 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQN 355 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCC
Confidence 12334455667777788999999999998543221122211 01110000 00001134567999999999876421
Q ss_pred -----CCCCChHHHHHHHHHhhc
Q 013955 256 -----DYDEYSDQYRWLKDDLSK 273 (433)
Q Consensus 256 -----~~~~~~~Q~~WL~~~L~~ 273 (433)
.+...+.-++.|++.|+.
T Consensus 356 idDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 356 VSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHB
T ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Confidence 111234456788888875
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.011 Score=47.75 Aligned_cols=90 Identities=16% Similarity=0.226 Sum_probs=54.5
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
..+...|..+++...+.+++.|.|..... .......|...-..... ... .... ...+....++|++|+|++.
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~--~~~--~~~~--~~~~~~~~~~i~~L~p~t~ 89 (132)
T 1x5h_A 16 DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR--KSD--VTET--LVSGTQLSQLIEGLDRGTE 89 (132)
T ss_dssp SSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE--EEE--EECC--BCCTTCCEEEEECCCSSCE
T ss_pred CCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCC--CCc--cEEE--EeCCCccEEEeCCCCCCCE
Confidence 34555788898887778999999998753 22233444322100000 000 0000 1223445678999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.++|.. .|....|+|.+
T Consensus 90 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 90 YNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEEECEEEETTEEEEECCCEEEECCS
T ss_pred EEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 9999864 25667888865
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.024 Score=42.24 Aligned_cols=67 Identities=18% Similarity=0.349 Sum_probs=43.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
+..|..+++...+.+++.++|..... ......|....+. ... +. ... -...+++|+||+.|+|+|
T Consensus 4 P~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V 68 (88)
T 1k85_A 4 PTAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTV 68 (88)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEE
T ss_pred cCCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEE
Confidence 45788888887789999999987643 2234555543211 111 11 111 134688999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 69 ~A 70 (88)
T 1k85_A 69 KA 70 (88)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.013 Score=45.99 Aligned_cols=81 Identities=11% Similarity=0.237 Sum_probs=51.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+++...+.+++.|.|...... ..-.|+|............ ... ...+.|++|+|++.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----------cCC--CcEEEECCCCCCCeEEEE
Confidence 47888988877799999999877432 2234555544322111000 011 235678999999999999
Q ss_pred ecc--------cCCeeEEECCCC
Q 013955 119 CGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p~ 133 (433)
|.. .|....|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 964 256677888653
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.017 Score=46.24 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=53.5
Q ss_pred CCCCCCCCceEEEE-ecCCCcEEEEEEcC--CCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 36 DPKPSSHPQQVHIS-LAGDSHMRVTWITD--DESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 36 ~~~~~~~p~qv~l~-~~~~~~~~i~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
+..++..|..+++. ..+.+++.|.|.-. ...... .|+|...... . ... ... ........+.|++
T Consensus 15 ~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~-~---~~~---~~~--~~~~~~~~~~l~~ 85 (124)
T 2dbj_A 15 EGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAG-I---SKE---LLE--EVGQNGSRARISV 85 (124)
T ss_dssp SCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETT-E---EEE---EEE--EEESTTSCEEEEC
T ss_pred CCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCC-C---ccc---eEE--EeCCCcceEEecC
Confidence 34566788888887 35689999999977 322222 3334321110 0 000 000 0011223567899
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|+|++.|.+||.. .|+...++|++.
T Consensus 86 L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 86 QVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp CCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999999964 356788888765
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.016 Score=45.02 Aligned_cols=82 Identities=16% Similarity=0.135 Sum_probs=52.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
....|..+++...+.+++.|+|.-.... ..-.|+|....+ ... .. ...+....+.|+||+|++.|.+
T Consensus 7 ~p~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~--~~~------~~----~~~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 7 GLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG--QTQ------EI----LLPGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp TCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS--CEE------EE----EECSSCSEEEECSCCTTCEEEE
T ss_pred CCCCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC--ceE------EE----EECCCccEEEECCCCCCCEEEE
Confidence 3457888988877899999999866432 223567765432 111 00 0122234678999999999999
Q ss_pred Eeccc-------CCeeEEECCC
Q 013955 118 RCGRQ-------GPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~~-------s~~~~F~T~p 132 (433)
+|... .....|+|..
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCcccCCEEEEEEeCC
Confidence 98641 2345677754
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.011 Score=45.33 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=45.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
.|..+.+.-.+.++++|+|......- .-.|+|........... . ...+..-.+.|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~------~----~~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAIN------L----TVPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEE------E----EEETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEE------E----EcCCCcCEEEECCCCCCCEEEEEEE
Confidence 47788888677999999998775322 33577776542111100 0 0112233578999999999999986
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.016 Score=46.06 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=47.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.....|..+.+...+.++++|.|.-.... ..-.|+|........+..... ........++|++|+|++
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--------~~~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 16 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--------AIPPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--------EECTTCCEEEEESCCTTC
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--------ccCCCcCEEEECCCCCCC
Confidence 44567888888877899999999843221 223567766542122221111 012223456789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.016 Score=44.15 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|.|...... ..-.|+|....+....... ........+.|++|+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL----------TVPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE----------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE----------EcCCCcCEEEecCCCCCCEEEEEE
Confidence 46888888877899999999977422 2346777754332111110 011223457899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0059 Score=48.78 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=55.2
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCC--ee-EEeeeeEEeeeeeecCeEEEEEe
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYN--CG-AEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
+..+...|..+++.....+++.|.|.-... ...-.|+|........ .. .... ... ..+....+.|
T Consensus 11 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~i 84 (125)
T 1uen_A 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK--ILT----FQGSKTHGML 84 (125)
T ss_dssp CCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEE--EEE----EESSCSEEEE
T ss_pred CCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccce--EEE----ecCCccEEEe
Confidence 345667888888887778999999987521 1123455655443221 00 0000 000 1122346788
Q ss_pred CCCCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 107 GPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++|+|+|.|.++|.. .|....|+|.+
T Consensus 85 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 118 (125)
T 1uen_A 85 PGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118 (125)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCC
Confidence 999999999999864 25567788865
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0064 Score=48.47 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=45.1
Q ss_pred cCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEeccc----
Q 013955 51 AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ---- 122 (433)
Q Consensus 51 ~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~~---- 122 (433)
.+.++++|.|.-..... .-.|+|........+.... .++....++|.+|+|++.|.+||...
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 46899999997543222 2367888764332222111 11222346799999999999999641
Q ss_pred ---CCeeEEECCCC
Q 013955 123 ---GPEFEFKTPPA 133 (433)
Q Consensus 123 ---s~~~~F~T~p~ 133 (433)
.....|+|.+.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 12467888653
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.024 Score=44.93 Aligned_cols=80 Identities=16% Similarity=0.277 Sum_probs=41.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeee--eeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYL--FYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~l~~L~p~ 112 (433)
++..|. +.-.+.++++|.|.-......+ .|+|........+........+... ....+....++|++|+|+
T Consensus 5 pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~ 81 (115)
T 2ic2_A 5 PPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 81 (115)
T ss_dssp CCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSS
T ss_pred CCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCC
Confidence 334554 5656789999999976543333 4556554222223222211110000 001123456789999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.|||..
T Consensus 82 t~Y~FRV~A 90 (115)
T 2ic2_A 82 HTYRFRILA 90 (115)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.011 Score=45.72 Aligned_cols=71 Identities=14% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC---CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE---SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
..|..+++.-.+.+++.+.|..... ...-.|+|....+..... ... .++....++|+||+|++.|.+
T Consensus 6 ~~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~------~~~----v~~~~t~~~l~~L~p~t~Y~~ 75 (101)
T 3k2m_C 6 SVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ------EFT----VPYSSSTATISGLSPGVDYTI 75 (101)
T ss_dssp BSSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE------EEE----EETTCCEEEECSCCTTCEEEE
T ss_pred CCCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE------EEE----cCCCccEEEECCCCCCCEEEE
Confidence 3688898887779999999987641 122357777654321110 000 111234678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 76 ~V~A 79 (101)
T 3k2m_C 76 TVYA 79 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.015 Score=45.99 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=50.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++...+.+++.|.|.-.... ..-.|+|....+... .. ...+....+.|++|+|+|.|.++
T Consensus 8 p~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~--------~~----~v~~~~t~~~l~~L~P~t~Y~~~ 75 (115)
T 2cuh_A 8 PDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL--------QA----ETPGSAVDYPLHDLVLHTNYTAT 75 (115)
T ss_dssp CSSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE--------EE----EEETTCSEEEECSCCSSSEEEEE
T ss_pred CCCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE--------EE----EECCCccEEEEeCCCCCCEEEEE
Confidence 346888888777789999999865322 223567765432110 00 01122345789999999999999
Q ss_pred eccc-------CCeeEEECCC
Q 013955 119 CGRQ-------GPEFEFKTPP 132 (433)
Q Consensus 119 v~~~-------s~~~~F~T~p 132 (433)
|... .....|+|.+
T Consensus 76 V~A~~~~~~s~~~~~~~~T~~ 96 (115)
T 2cuh_A 76 VRGLRGPNLTSPASITFTTGL 96 (115)
T ss_dssp EEEEETTEECCCEEEEEESCC
T ss_pred EEEEeCCCcCCCEEEEEEeCC
Confidence 8641 2345677754
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0025 Score=60.75 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh--hCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~--~~iP~~~v~GNHD~~ 208 (433)
.++.++||+|.... ..++++.+.....+-+|++||+++.+.... + ....+..+. ..-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~--e-vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--H-HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChH--H-HHHHHHHhhhhcCCceEEecCCchHh
Confidence 35899999985421 234445554556788999999998765422 1 122222221 123588999999974
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.016 Score=45.53 Aligned_cols=84 Identities=23% Similarity=0.282 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+++.-.+.+++.|+|.-... ...-.|+|....+....... ..+....+.|++|+|+|.|.
T Consensus 6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~ 74 (108)
T 2ee3_A 6 SGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYT 74 (108)
T ss_dssp CCCCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEE
T ss_pred cCCCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEE
Confidence 3556899999987789999999976532 23346778765432111000 11222357899999999999
Q ss_pred EEeccc-----C--CeeEEECCC
Q 013955 117 YRCGRQ-----G--PEFEFKTPP 132 (433)
Q Consensus 117 Y~v~~~-----s--~~~~F~T~p 132 (433)
++|..- + ....|+|.+
T Consensus 75 v~V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 75 VRVTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEEEECTTSCEEEEEEEEECCC
T ss_pred EEEEEEeCCCcCCCccCEEEeCC
Confidence 998641 1 134688853
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.019 Score=45.96 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=47.5
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCCC-----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESSP-----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
|..+.+...+.+ +.|.|.-...... -.|+|............ ... ........++|++|+|+|.|.+
T Consensus 11 P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~~L~p~t~Y~~ 82 (122)
T 2e3v_A 11 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW------YDA-KEASMEGIVTIVGLKPETTYAV 82 (122)
T ss_dssp CEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE------EEH-HHHHTTTEEEECSCCTTCEEEE
T ss_pred CCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce------eee-eecCccceEEeCCCCCCCEEEE
Confidence 888887766666 9999997643221 24555544321110100 000 0011123568899999999999
Q ss_pred Eecc--------cCCeeEEECCC
Q 013955 118 RCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p 132 (433)
||.. .|....|+|.+
T Consensus 83 rV~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 83 RLAALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCccCCCcccccccccC
Confidence 9964 24556676655
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.016 Score=45.79 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=50.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.+++.|.|......... .|+|........+.... .... ..+.|++|+|++.|
T Consensus 18 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~--~~~~v~~L~p~t~Y 86 (118)
T 1x3d_A 18 PDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY---------MGSQ--KQFKITKLSPAMGC 86 (118)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE---------EESC--SEEEEESCCTTCEE
T ss_pred CcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee---------ccCC--cEEEeCCCCCCCEE
Confidence 346777777777789999999887533333 34454433211111110 0111 34578999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.|||.. .|....++|.+
T Consensus 87 ~frV~A~n~~G~s~~S~~~~~~T~~ 111 (118)
T 1x3d_A 87 KFRLSARNDYGTSGFSEEVLYYTSG 111 (118)
T ss_dssp EEECCEEESSCBCCCCCCEEEECSC
T ss_pred EEEEEEEECCCCCCCccCEEEEcCC
Confidence 999964 24566677754
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0071 Score=46.97 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=47.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++.-.+.++++|.|..... ...-.|+|.......... . . ..++....++|+||+|++.|
T Consensus 8 ~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~ts~~l~~L~p~t~Y 77 (103)
T 3t04_D 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-E-----F----TVPGYYSTATISGLKPGVDY 77 (103)
T ss_dssp CCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE-E-----E----EEETTCCEEEECSCCTTCCE
T ss_pred CCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE-E-----E----EcCCCcCEEEeCCCCCCCEE
Confidence 45788888887779999999987652 122367777653211110 0 0 01122446789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.++|..
T Consensus 78 ~~~V~A 83 (103)
T 3t04_D 78 TITVYA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999854
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.021 Score=45.78 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=47.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.+++.|.|.-.... ..-.|+|....+..... ... .++....+.|+||+|+|.|.
T Consensus 27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~------~~~----v~~~~t~~~l~gL~P~t~Y~ 96 (121)
T 2ocf_D 27 SVSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ------EFT----VPGSKSTATISGLKPGVDYT 96 (121)
T ss_dssp --CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE------EEE----EETTCCEEEECCCCTTCEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE------EEE----eCCCcCEEEeCCCCCCCEEE
Confidence 45578999999988899999999876422 23456676654321100 000 11223467899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 97 ~~V~A 101 (121)
T 2ocf_D 97 ITVYA 101 (121)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.018 Score=46.46 Aligned_cols=84 Identities=21% Similarity=0.310 Sum_probs=52.1
Q ss_pred CCCCCCc-eEEEEecCCCcEEEEEEcCCCCC-Cc-EEEEeccCCC----------CCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 38 KPSSHPQ-QVHISLAGDSHMRVTWITDDESS-PS-VVEYGTSPGG----------YNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 38 ~~~~~p~-qv~l~~~~~~~~~i~W~t~~~~~-~~-~v~y~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
..+..|. .+++...+.+++++.|....... .. .++|...... ..+..... ... ...
T Consensus 14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~---------~~~--~~~ 82 (127)
T 2dmk_A 14 TAPNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN---------IKQ--NHY 82 (127)
T ss_dssp SSCCCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE---------ECS--SEE
T ss_pred CCCcCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec---------ccC--CeE
Confidence 3455788 78888778999999999885422 22 5677651110 01111100 111 235
Q ss_pred EeCCCCCCCEEEEEecc-------cCCeeEEECCC
Q 013955 105 VIGPLEHDTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
+|+||+|++.|.|||.. .+....++|++
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~ 117 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNS 117 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCC
Confidence 78899999999999964 24556677765
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.022 Score=49.91 Aligned_cols=84 Identities=17% Similarity=0.147 Sum_probs=53.1
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC--------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.+...|..+.+...+.++++|+|..... ...-.|+|............ .......+.|++|
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L 71 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGL 71 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----------EEESSSEEEECSC
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----------eCCCceEEEecCc
Confidence 3556899999887789999999997421 12345667654322111110 0112335678999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|++.|.++|.. .+....++|.+
T Consensus 72 ~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 72 KPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 999999999864 24467788754
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.015 Score=45.32 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC-C----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS-P----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.++++|.|....... . -.|+|...... .+..... ........+|++|+|++
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~-~w~~~~~---------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 7 GTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTE-DWIVANK---------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCS-SEEECCS---------SCCCSSEEEECSCCTTC
T ss_pred CCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCc-cceEecc---------ccCccCEEEECCCCCCC
Confidence 34578888888777899999999764321 1 24555544321 1111110 11123346789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0065 Score=48.12 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
+.+...|....+.-.+.++++|.|..... ...-.|+|....... +..... ........+++||+|
T Consensus 8 ~~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~-w~~~~~---------~~~~~~~~~v~~L~p 77 (112)
T 1bpv_A 8 SSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGR-WLKANF---------SNILENEFTVSGLTE 77 (112)
T ss_dssp -CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCC-CEECCC---------SCCCSSEEEECSCCS
T ss_pred CCCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCc-eEEeec---------ccCccCEEEECCCCC
Confidence 34556777777776779999999985421 233567887654322 211110 011122357899999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.|||..
T Consensus 78 ~t~Y~frV~A 87 (112)
T 1bpv_A 78 DAAYEFRVIA 87 (112)
T ss_dssp SCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999965
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.024 Score=44.99 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=47.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+..|..+.+.-.+.+++.|.|...... ..-.|+|....+..... ... .++....++|+||+|+|.|.++
T Consensus 4 P~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~------~~~----v~~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 4 SDVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ------EFT----VPGPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp -CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE------EEE----EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccE------EEE----eCCCcCEEEeCCCCCCCEEEEE
Confidence 457889988877899999999876422 33467787654321100 000 1122345789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.011 Score=46.35 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=46.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
.....|..+.+...+.++++|.|.-.... ..-.|+|...... .+..... .......++|++|+|+
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~-~w~~~~~---------~~~~~~~~~v~~L~p~ 76 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSE-EWVPANK---------EPVERCGFTVKDLPTG 76 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCC-CCEESSS---------SCBSSSEEEEECCCTT
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCC-ceEEccc---------cCCcccEEEECCCCCC
Confidence 34457888888877899999999976432 2234666554322 1111110 1112334678899999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.|||..
T Consensus 77 t~Y~frV~A 85 (111)
T 1x5y_A 77 ARILFRVVG 85 (111)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999975
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.02 Score=45.46 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=47.5
Q ss_pred CCCceEEEE-ecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 41 SHPQQVHIS-LAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 41 ~~p~qv~l~-~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
..|..+.+. -.+.+++.|.|...... ..-.|+|........+.... .+.....+|++|+|++.
T Consensus 19 ~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 19 GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-----------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-----------CSSCSEEEECSCCTTSC
T ss_pred CCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-----------eccccEEEECCCCCCCE
Confidence 356565555 44588999999865432 22356666543211111110 11123467899999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|||.. .|+...++|.+
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999964 24455666643
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.016 Score=45.17 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=48.2
Q ss_pred CCCCceEEEE-ecCCCcEEEEEEcCCC-C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 40 SSHPQQVHIS-LAGDSHMRVTWITDDE-S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 40 ~~~p~qv~l~-~~~~~~~~i~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
...|..+.+. ..+.+++.|.|..... . ..-.|+|............ . +....++|++|+|++
T Consensus 9 P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t 76 (110)
T 2crz_A 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGK 76 (110)
T ss_dssp CCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTC
T ss_pred CCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCC
Confidence 3467777663 3457899999965422 1 2245667654322111111 0 112345788999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .|....++|.+
T Consensus 77 ~Y~frV~A~n~~G~g~~S~~~~~~T~~ 103 (110)
T 2crz_A 77 TYSFRLRAANKMGFGPFSEKCDITTAP 103 (110)
T ss_dssp EEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCccccccCC
Confidence 99999964 24566777754
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.013 Score=48.27 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=45.7
Q ss_pred EEEecCCCcEEEEEEcCCCC-C------------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 47 HISLAGDSHMRVTWITDDES-S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 47 ~l~~~~~~~~~i~W~t~~~~-~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+...++++++++|.-.... . .-.|+|..+......... ..+-...++|+||+|+|
T Consensus 25 ~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-----------~~g~~ts~~v~~L~P~T 93 (137)
T 1wk0_A 25 VASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-----------YVGEETNITLNDLKPAM 93 (137)
T ss_dssp EEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-----------EEESCSEEEECSCCTTC
T ss_pred EEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-----------EecCccEEEEcCCCCCC
Confidence 35666799999999876433 1 112334333221111100 01122457899999999
Q ss_pred EEEEEecc--------cCCeeEEECCCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|.+||.. .|....|+|++.
T Consensus 94 ~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 94 DYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 99999964 256778999764
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=45.84 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=48.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCe--eEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNC--GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
...|.++++.-.+.++++|.|..... ...-.|+|....+.... ...+..... ..++....++|+||+|||.|.
T Consensus 9 pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~----~v~~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCEEE
T ss_pred CCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEE----EcCCCcCEEEeCCCCCCCEEE
Confidence 34678888888889999999986532 23456788765431000 000000000 012223468899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 85 ~~V~A 89 (112)
T 2cui_A 85 LTLYG 89 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.039 Score=47.15 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=50.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+.+...+.+++.|.|.-.... ..-.|+|....+....... ..+....+.|+||+|++.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----------cCCCcCEEEEcCCCCCCEEEEE
Confidence 457888888766789999999865322 2345667665431111100 1122345789999999999999
Q ss_pred eccc-----C--CeeEEECCC
Q 013955 119 CGRQ-----G--PEFEFKTPP 132 (433)
Q Consensus 119 v~~~-----s--~~~~F~T~p 132 (433)
|... | ....|+|.|
T Consensus 164 V~A~~~~g~s~p~~~~~~T~p 184 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTAL 184 (186)
T ss_dssp EEEEETTEECCCEEEEEEC--
T ss_pred EEEEcCCCcCcCEEEEEEecC
Confidence 9641 2 245677765
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.016 Score=44.32 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=46.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++.-.+.+++.|.|..... ...-.|+|....+..... . . ..++....++|+||+|++.|.++
T Consensus 5 ~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~t~~~l~~L~p~t~Y~v~ 74 (97)
T 3qht_C 5 SSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQ-E-----F----TVPGSSSTATISGLSPGVDYTIT 74 (97)
T ss_dssp CCSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCE-E-----E----EEETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccE-E-----E----EeCCCcCEEEeCCCCCCCEEEEE
Confidence 34688888887779999999986532 223457777654321110 0 0 01222346789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 75 V~A 77 (97)
T 3qht_C 75 VYA 77 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.037 Score=43.49 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=52.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+...|..+.+.- ..+++++.|.-+... ..-.|+|.... ..+...... ......+..|.+|+|++.
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~--~~W~~~~~~--------~~~~~t~~~v~~L~pg~~ 75 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS--QGWEVLDPA--------VAGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT--CCCEEEEEE--------ECSSCCEEECCCCCTTSC
T ss_pred CCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC--CCcEEeeee--------cCCCcCEEEeCCCCCCCE
Confidence 346788888874 467899999987532 23467887632 222221110 112234567999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|||.. .|+...++|..
T Consensus 76 Y~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 76 YEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 9999964 24556666654
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0094 Score=56.74 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=43.4
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCC-ceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
....+++++||+|.... ..++++.+..... +.+|++||+++.+....+ . ...+..+.. .-.++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e--v-l~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCE--V-ALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHH--H-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHH--H-HHHHHHHhhhCCCcEEEecCchhhh
Confidence 46789999999986521 2234444433333 469999999987654221 1 122222221 13488899999963
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0062 Score=57.05 Aligned_cols=68 Identities=18% Similarity=0.157 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh--hCCCceeccCCCcCC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~--~~iP~~~v~GNHD~~ 208 (433)
+++++||+|.... ..++++.+.....+-+|++||+++.+....+ . ...+..+. ..-.++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE--T-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH--H-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHH--H-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 5899999986522 2334444445566789999999987654221 1 12222221 123588999999973
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0074 Score=56.96 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
...+++++||+|.... ..++++.+... ..+.++++||+++.+.... +. ...+..+.. .-.++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EV-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HH-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 3578999999985521 22333333322 3356999999998765421 11 122222211 23488899999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0082 Score=60.40 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=42.7
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCC-CceEEccccccccccchhhHHHhhhhhhhh--hhCCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCK-YDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~-pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l--~~~iP~~~v~GNHD~~ 208 (433)
...+++++||+|.... ...+++.+.... .+.+|++||+++.+.... +.+ ..+..+ ...-.++.+.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~-~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVI-LTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHH-HHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHH-HHHHHHHhhCCCceEeecCCccHH
Confidence 4578999999985421 223444443333 356999999998765321 111 122222 1235688999999963
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.027 Score=49.30 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=50.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCC-----CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDD-----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~-----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
+...|..+.+...+.+++.|.|.... ....-.|+|............. ..........|++|+|++
T Consensus 115 ~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 115 PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---------IEGAHARSFKIAPLETAT 185 (214)
T ss_dssp CCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---------EECTTCCEEEECSCCTTC
T ss_pred CCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee---------ccCCcceEEEeCCCCCCC
Confidence 33457777666556889999999873 1123456676554311111110 011112346789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .|....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999964 24566777753
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.061 Score=41.33 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=42.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|. +.|...+.+++.|.|....... .-.|+|........... .........+|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----------DFGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----------EEETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----------EeCCCccEEEeCCCCCCCEEEE
Confidence 455 6677667899999999874322 23566765543211111 0112233567899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.11 Score=41.37 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=48.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCC-CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.++++|.|.-...... -.|+|...... ..+...... ..... . .+.+|+|++
T Consensus 16 ~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~-------~~~~~-~--~i~~L~p~t 85 (127)
T 1uey_A 16 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV-------SGTQT-T--AQLNLSPYV 85 (127)
T ss_dssp SCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE-------ESSCC-E--EEECCCTTC
T ss_pred CCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeee-------CCCce-E--EEecCCCCC
Confidence 345888898887779999999996533232 34555543221 112111110 01111 1 356999999
Q ss_pred EEEEEecc--------cCCe-eEEECCC
Q 013955 114 VYFYRCGR--------QGPE-FEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~-~~F~T~p 132 (433)
.|.|||.. .|.. ..|+|.+
T Consensus 86 ~Y~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 86 NYSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp EECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEEEeCCccCCccccccceEcCC
Confidence 99999964 1333 4677754
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0084 Score=57.43 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.......+-+|++||+++.+.... +. ...+..+... -.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--Ev-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999986531 233444444566788999999998765421 11 1222222211 3488899999974
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.043 Score=42.67 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=42.7
Q ss_pred CCCCceEEEEec-CCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLA-GDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~-~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+..|..+.++.. +.+++.++|.... ....+.-|+...........+.. .... ....++|++|++|+|+
T Consensus 5 P~aP~~l~a~~~~~~~~v~LsW~~~~-~~~~Y~VyR~~~~~~~~~~i~~~--------~~~t--sy~d~~l~~g~~Y~Y~ 73 (103)
T 3mpc_A 5 PAFPTGLSAVLDSSGNTANLTWNAAP-GANSYNVKRSTKSGGPYTTIATN--------ITST--NYTDTGVATGTKYYYV 73 (103)
T ss_dssp CCCCEEEEEEECTTSCCEEEEEECCT-TCSEEEEEEESSTTCCCEEEEEE--------ECSS--EEEETTCCTTCCCEEE
T ss_pred CCCCceeEEEEeCCCCEEEEEEECCC-CCCEEEEEEecCCCCCcEEEeec--------CCCC--EEEECCCCCCCEEEEE
Confidence 457888888765 3679999999864 34455556554322111111110 0111 1234799999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~A 76 (103)
T 3mpc_A 74 VSA 76 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.016 Score=46.58 Aligned_cols=81 Identities=15% Similarity=0.198 Sum_probs=45.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----Cc-EEEEeccC---CCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PS-VVEYGTSP---GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~-~v~y~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
..|....+.-.+.+++++.|.-+.... .. ...|-... ....+.... ... ...++|++|+|+
T Consensus 17 ~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~---------~~~--~t~~~v~gL~p~ 85 (120)
T 1wfu_A 17 SKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY---------TGY--ATRHVVEGLEPR 85 (120)
T ss_dssp CCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE---------EES--CSEEEEESCCTT
T ss_pred CCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEe---------cCC--ccEEEECCCCCC
Confidence 344444344345899999998764322 12 34443331 111111110 111 123678999999
Q ss_pred CEEEEEecc--------cCCeeEEECCC
Q 013955 113 TVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|.|||.. .|+...++|.+
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 1wfu_A 86 TLYKFRLKVTSPSGEYEYSPVVSVATTR 113 (120)
T ss_dssp CEEEEEEEEECSSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEECCCCCCCCCccEeeEcCC
Confidence 999999974 25667788865
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.069 Score=47.60 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.++++|+|.-... ...-.|+|............- ......+.|++|+|++.|.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~ 72 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL-----------DSKVPSVELTNLYPYCDYE 72 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE-----------EESSSEEEECSCCTTCEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEE-----------cCCccEEEECCCCCCCEEE
Confidence 4567899999988789999999987632 223456776554321111100 0112346789999999999
Q ss_pred EEecc--------cCCeeEEECCC
Q 013955 117 YRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p 132 (433)
++|.. .+....++|..
T Consensus 73 ~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 73 MKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCCcCCCCCeEEEEcCC
Confidence 99864 24456777753
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.041 Score=43.63 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=46.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+.+...+.+++.|.|...... ..-.|+|............ . ......+.|++|+|++
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~-~----------~~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 17 RPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI-E----------HYHRTSATITELVIGN 85 (120)
T ss_dssp CCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE-S----------SCCSSCCEECCCCSSE
T ss_pred CCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee-e----------cCCcCEEEECCCCCCC
Confidence 4457888888767789999999875422 2245777765432221111 0 1112335789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 86 ~Y~frV~A 93 (120)
T 2yux_A 86 EYYFRVFS 93 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEE
Confidence 99999975
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.097 Score=47.83 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=55.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC-CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD-ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.++++|.|.-.. ....-.|+|.......... .. ........+.|++|+|++.|.
T Consensus 13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~------~~----~~~~~~~~~~i~~L~p~t~Y~ 82 (283)
T 1tdq_A 13 PVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TF----RLQPPLSQYSVQALRPGSRYE 82 (283)
T ss_dssp CSSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EE----EECTTCSEEEECSCCTTCEEE
T ss_pred cCCCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcE------EE----EeCCCCCEEEecCCCCCCEEE
Confidence 455689999888778999999999875 2233467776543221110 00 012234456889999999999
Q ss_pred EEeccc-------CCeeEEECCCC
Q 013955 117 YRCGRQ-------GPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~~-------s~~~~F~T~p~ 133 (433)
++|... .....|+|+|.
T Consensus 83 ~~V~a~~~~g~s~~~~~~~~t~p~ 106 (283)
T 1tdq_A 83 VSISAVRGTNESDASSTQFTTEID 106 (283)
T ss_dssp EEEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEECCCCCCCCeeEEEECCCC
Confidence 999641 23456777653
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.015 Score=43.95 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+++...+.+++.|+|.-... ...-.|+|....+. ...... ...+....+.|+||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~V 72 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFP---APDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECC---CCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEe---cCCCCccEEEeCCCCCCCEEEEEE
Confidence 3577788887778999999966532 12346677654321 000000 112234567899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (94)
T 1j8k_A 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.024 Score=44.50 Aligned_cols=72 Identities=10% Similarity=0.201 Sum_probs=43.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.++++|.|....... .-.|+|........+.... .......+.|++|+|++.|
T Consensus 16 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y 85 (117)
T 1uem_A 16 PGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----------NHVKTTLYTVRGLRPNTIY 85 (117)
T ss_dssp CBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----------EEECSSEEEECSCCTTCEE
T ss_pred ccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc----------cccCcCEEEECCCCCCCEE
Confidence 3467788888777899999998664222 2345565432111111100 0011224688999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 86 ~frV~A 91 (117)
T 1uem_A 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.07 Score=41.58 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCCCCCCCCCceEEEEecC--CCcEEEEEEcCCC---C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 34 PWDPKPSSHPQQVHISLAG--DSHMRVTWITDDE---S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~--~~~~~i~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
|++......|..+++.... .+++.|.|..+.. . -.-.|+|............. .. ...+
T Consensus 2 P~~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~~--~~~~ 69 (109)
T 1uc6_A 2 PLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------SN--GTAH 69 (109)
T ss_dssp CTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------SS--CSEE
T ss_pred CcCEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------cc--CCEE
Confidence 3444556689999888643 5899999998753 1 23467777765321111110 01 1346
Q ss_pred EeCCCCCCCEEEEEecc
Q 013955 105 VIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~ 121 (433)
.|.+|+||+.|.+||..
T Consensus 70 ~l~~L~p~t~Y~~~VRa 86 (109)
T 1uc6_A 70 TITDAYAGKEYIIQVAA 86 (109)
T ss_dssp EETTCCSSSCEEEEEEC
T ss_pred EEeCCCCCCEEEEEEEE
Confidence 78999999999999965
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.038 Score=43.47 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
..|..+++...+.+++.|.|....... .-.|+|...... ..... . ........+.|++|+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~-~~~~~------~---~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGG-ELHRL------N---IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSC-CEEEE------E---ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCC-ceEEE------E---cCCCCcCEEEeCCCCCCCEEEE
Confidence 467778777666899999998775431 123455543321 11100 0 1112234577899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.061 Score=43.04 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=47.7
Q ss_pred eEEEEec---CCCcEEEEEEcCCCC---CCcEEEEeccCCC---CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 45 QVHISLA---GDSHMRVTWITDDES---SPSVVEYGTSPGG---YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 45 qv~l~~~---~~~~~~i~W~t~~~~---~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+|+|-.. +++++.|+|.-.... ..-.|.|...... ...... . ...+-...+.|+||+|+|.|
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~------~---v~~~~~~~~~l~~L~p~T~Y 88 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL------D---AKVPTERSAVLVNLKKGVTY 88 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE------E---CCCTTCCEEEEESCCSSEEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE------E---ecCCCcCEEEECCCCCCCEE
Confidence 4555333 478999999964221 1236778776431 111100 0 01222456789999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.++|.. .|....|+|+.
T Consensus 89 ~~~V~A~n~~G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 89 EIKVRPYFNEFQGMDSESKTVRTTE 113 (120)
T ss_dssp EEEEEEESSSCCCCCCCCEEEEECS
T ss_pred EEEEEEECCCccCCCCCCEEEECCC
Confidence 999964 25667777764
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.46 E-value=0.01 Score=59.36 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.......+-+|++||+++.+....+ ....+..+... -.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E---vl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH---HHHHHHHHhhhCCCeEEEecCCccHH
Confidence 45899999985421 1233332223456889999999987654221 11222222211 2488899999973
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.013 Score=45.92 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=42.3
Q ss_pred CCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc------
Q 013955 52 GDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR------ 121 (433)
Q Consensus 52 ~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~------ 121 (433)
+.++++|.|.-.... ..-.|+|...... .+.... .+.....+|++|+|++.|.|||..
T Consensus 23 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~-----------~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2db8_A 23 HNNSATLSWKQPPLSTVPADGYILELDDGNGG-QFREVY-----------VGKETMCTVDGLHFNSTYNARVKAFNKTGV 90 (110)
T ss_dssp SSSEEEECCBCCTTCCSCCSEEEEEECCSSSS-CCEEEE-----------EESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCCccEEEEEEEeCCCC-ceEEEE-----------eCCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence 478999999876532 2235667654321 111100 001123568899999999999964
Q ss_pred --cCCeeEEECCCC
Q 013955 122 --QGPEFEFKTPPA 133 (433)
Q Consensus 122 --~s~~~~F~T~p~ 133 (433)
.|+...++|.+.
T Consensus 91 s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 91 SPYSKTLVLQTSEG 104 (110)
T ss_dssp CCCCSCEECCCCCC
T ss_pred CCCCCCEEEEcCCC
Confidence 255677887653
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.06 Score=45.95 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=50.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++...+.++++|.|.-.... ..-.|+|....+ ... .. ...+....+.|++|+|++.|.|+
T Consensus 7 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~--~~~------~~----~~~~~~~~~~i~~L~p~t~Y~~~ 74 (186)
T 1qr4_A 7 LDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSG--KKN------EM----EIPVDSTSFILRGLDAGTEYTIS 74 (186)
T ss_dssp -CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTC--CEE------EE----EECTTCSEEEEESCCSSCEEEEE
T ss_pred CcCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCC--Cee------EE----ECCCCCCEEEECCCCCCCEEEEE
Confidence 457889988877799999999975432 334667764321 110 00 01122234678999999999999
Q ss_pred eccc-----C--CeeEEECCCC
Q 013955 119 CGRQ-----G--PEFEFKTPPA 133 (433)
Q Consensus 119 v~~~-----s--~~~~F~T~p~ 133 (433)
|... + ....++|+|.
T Consensus 75 V~a~~~~~~s~~~~~~~~t~p~ 96 (186)
T 1qr4_A 75 LVAEKGRHKSKPTTIKGSTVVG 96 (186)
T ss_dssp EEEESSSCBCCCEEEEEECCCC
T ss_pred EEEEcCCccCCCEEEEEECCCC
Confidence 9641 2 2355666553
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.084 Score=45.81 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=47.9
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...+.+++.|.|.... . ...-.|+|........+.... ..........|++|+
T Consensus 102 ~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~ 172 (205)
T 1cfb_A 102 DVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---------IFDWRQNNIVIADQP 172 (205)
T ss_dssp CCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---------ECCTTCCEEEECSCC
T ss_pred cCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE---------ecCCCccEEEEcCCC
Confidence 3455678888888667899999998764 1 123356676654322111110 011123456889999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.++|..
T Consensus 173 p~t~Y~~~V~A 183 (205)
T 1cfb_A 173 TFVKYLIKVVA 183 (205)
T ss_dssp SSCEEEEEEEE
T ss_pred CCcEEEEEEEE
Confidence 99999999964
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.24 E-value=0.068 Score=49.11 Aligned_cols=82 Identities=26% Similarity=0.390 Sum_probs=50.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC------CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD------ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.+...| ++.+...+.+++.|.|.-.. ....-.|+|....+.. ... . ..+.....+|++|+|
T Consensus 196 ~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-------~----~~~~~~~~~~~~L~p 262 (290)
T 3l5i_A 196 PPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-------N----VDSSHTEYTLSSLTS 262 (290)
T ss_dssp CCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-------E----EETTCSEEEECSCCT
T ss_pred CCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-------E----eCCCceEEEeCCCCC
Confidence 344444 67676667899999997321 1223456676653321 100 0 112233567999999
Q ss_pred CCEEEEEecc-------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
++.|.++|.. .|....|+|++
T Consensus 263 ~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 263 DTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp TCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred CCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 9999999964 35678888865
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.3 Score=44.49 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=48.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+...+.++++|.|...... ..-.|+|....+.......-. ...+....+.|++|+|++.|.+
T Consensus 104 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 104 EIDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC--------CCCcccceEEEecCCCCCEEEE
Confidence 4567888888877899999999987422 334667765543211110000 0111256678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 176 ~V~A 179 (283)
T 1tdq_A 176 GISA 179 (283)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.098 Score=46.39 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=58.3
Q ss_pred CCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
|+.......|..+++...+.+++.|+|..+.... .-.|+|...... ....... ........+.|.
T Consensus 100 P~~~vk~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--------~~~~~~~~~~l~ 170 (214)
T 2b5i_B 100 PFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--------TLKQKQEWICLE 170 (214)
T ss_dssp GGGSBCCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--------EECSCCCEEEEC
T ss_pred cccccCCCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--------eecccceEEEec
Confidence 4445556789999998777789999999875321 245777665321 1111000 011224467789
Q ss_pred CCCCCCEEEEEecc------------cCCeeEEECCCC
Q 013955 108 PLEHDTVYFYRCGR------------QGPEFEFKTPPA 133 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~------------~s~~~~F~T~p~ 133 (433)
+|+||+.|..||.. +|....|+|.+.
T Consensus 171 ~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 171 TLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred cCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 99999999999863 245678888763
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=95.21 E-value=0.044 Score=47.76 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=46.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+++...++++++++|..+... ..-.|+|.......... . . ..++....++|+||+|+|.|.+
T Consensus 103 ~~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 103 VSSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQ-E-----F----TVPYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp -CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE-E-----E----EEETTCSEEEECSCCTTCEEEE
T ss_pred cCCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcce-E-----E----EeCCCCCEEEeCCCCCCCEEEE
Confidence 3467788888877799999999766422 23457776554321000 0 0 0112234578999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.20 E-value=0.084 Score=45.95 Aligned_cols=86 Identities=16% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+.+...+. +++|.|..... ...-.|+|............-. ....+.....+|++|+|++
T Consensus 8 ~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-------AKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEE-------HHHHHHHSEEEECCCCTTC
T ss_pred CCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEee-------ccCCCccceEEeCCCCCCC
Confidence 344688888876555 69999998632 1223566765543221111100 0001123356789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .+....++|.+
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred eEEEEEEEEcCCcccCCcccccccccC
Confidence 99999964 23455677754
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.043 Score=43.33 Aligned_cols=72 Identities=13% Similarity=0.159 Sum_probs=42.7
Q ss_pred CCCCceE--EEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 40 SSHPQQV--HISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 40 ~~~p~qv--~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
...|..+ .+...+.++++|.|.-....... .|+|.... ..+..... ...+....++|++|+|++
T Consensus 18 P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~--~~~~~~~~--------~~~~~~~~~~v~~L~p~t 87 (121)
T 1wf5_A 18 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN--APWTVLLA--------SVDPKATSVTVKGLVPAR 87 (121)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT--CCCEEEES--------SCCTTCCEEEEESCCTTC
T ss_pred CccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC--CCceEeEc--------ccCCCccEEEECCcCCCC
Confidence 4467777 56555688999999866333332 34454432 11111100 112223457889999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1wf5_A 88 SYQFRLCA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.24 Score=42.92 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=45.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+.+...+.++++|.|...... ..-.|+|............ . .........|++|+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---------VDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---------cCCCccEEEeCCCCCCCEEEEEE
Confidence 6888888877799999999987531 1345667655432111110 0 11223356789999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.14 Score=45.06 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=43.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
..|..++.+-.++++++++|..+... ...-.|..--+. ... ++. ..... ..+++||+|+|.|.|+|.
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~~-~GI~gY~ly~~g-~~v--~~v-------~~~~t--syt~~gLk~~TeYsF~V~ 218 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPETT-EGLEGYILYKDG-KKV--AEI-------GKDET--SYTFKKLNRHTIYNFKIA 218 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-TTEEEEEEEETT-EEE--EEE-------ETTCC--EEEECSCCTTCEEEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCCC-CCceeEEEEeCC-cee--EEe-------eccce--EEEecCCCCCCEEEEEEE
Confidence 78889999988899999999988543 233444433211 111 110 01111 235789999999999996
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 219 A 219 (238)
T 2w1n_A 219 A 219 (238)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.054 Score=46.98 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=44.9
Q ss_pred CCceEEEEecC--CCcEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAG--DSHMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~--~~~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|.++.+.-.. ++++.|.|.... ....-.|+|............ . ..+....+.|+||+|++.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA------T----IPGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEE------E----ECTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEE------e----cCCCccEEEecCCCCCCEEEE
Confidence 57788777655 899999999873 123346777754432111110 0 112233678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 72 ~V~a 75 (201)
T 2ha1_A 72 QLIS 75 (201)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.96 E-value=0.14 Score=43.56 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=46.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+++...+.++++|.|...... ..-.|+|.............. .......+++|+|++
T Consensus 5 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGC 73 (197)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTC
T ss_pred CCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCC
Confidence 3457888888877899999999986321 223566665543221111100 112346789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|+|..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.1 Score=45.50 Aligned_cols=88 Identities=22% Similarity=0.300 Sum_probs=52.6
Q ss_pred CCCCCCCceEEEEecC--CCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...+ .+++.|.|.-..... .-.|+|............-. ...+....+.|++|+
T Consensus 103 ~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~ 174 (211)
T 3p4l_A 103 LVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELT 174 (211)
T ss_dssp CCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE--------EEESSCSEEEECCCC
T ss_pred CCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE--------EecCCeeEEEEcCCC
Confidence 3555688889888764 689999999764322 23566665433211100000 011223456889999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.++|.. .|+...|+|..
T Consensus 175 p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 175 LDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 99999999964 24555666543
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.89 E-value=0.047 Score=43.06 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=44.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.....+++.|.|....... .-.|+|............ ........+.|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 1wfn_A 19 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYT 88 (119)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEE
T ss_pred CCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEE----------EeCCCceEEEEcCCCCCCEEE
Confidence 457788887667899999998764322 234556544321110000 112234457789999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
+||..
T Consensus 89 ~~V~A 93 (119)
T 1wfn_A 89 IEVAA 93 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.015 Score=45.13 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=46.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++.-.+.+++.|.|.-.... ..-.|+|.......... . . ...+....++|+||+|+|.|.++
T Consensus 8 p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~----~v~~~~~~~~l~~L~p~t~Y~~~ 77 (105)
T 2ekj_A 8 RSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S---V----SVPGARSHVTLPDLQAATKYRVL 77 (105)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C---B----CCBTTSSEEEECSCCSSCCCBCB
T ss_pred CCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E---E----EeCCCcCEEEeCCCCCCCEEEEE
Confidence 347899998877799999999887422 23345565443211100 0 0 01122345789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 78 V~A 80 (105)
T 2ekj_A 78 VSA 80 (105)
T ss_dssp BCB
T ss_pred EEE
Confidence 975
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.76 E-value=0.12 Score=38.72 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=51.5
Q ss_pred CCCceEEEEecC--CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~--~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|-|+.++-.. +++-.|.|..+..+ .+-.+.|+.......+.-. .-++....-+|+||+||..|.
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~----------~Ip~h~nSYtI~GL~P~~~YE 75 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYE 75 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE----------EECSSCCEEEECSCCSSEEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEE----------EecCccceEEEecCCCCcEEE
Confidence 346677676444 78999999998643 3446677776543222110 123455566899999999999
Q ss_pred EEecc-----cC--CeeEEEC
Q 013955 117 YRCGR-----QG--PEFEFKT 130 (433)
Q Consensus 117 Y~v~~-----~s--~~~~F~T 130 (433)
=+|-+ ++ ..|.|.|
T Consensus 76 ~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 76 GQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEeeccCcccceEEEEEe
Confidence 99865 12 2677766
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.12 Score=44.85 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+.+...+.+++.|.|..... ...-.|+|....+....... ...+....+.|+||+|++.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----------SISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEE----------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEE----------EcCCCcCEEEECCCCCCCEEEEEE
Confidence 688888877779999999998742 13346677764322111100 112234457889999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.66 E-value=0.099 Score=41.19 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.-.+ +++.|.|.-..... .-.|+|..... ..... .........+|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----------~~~~~~~~~~l~~L~p~t~Y~ 85 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----------RVDSKQRYYSIERLESSSHYV 85 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----------EEETTCCEEEECSCCSSSBEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----------EeCCCeeEEEeCCCCCCCEEE
Confidence 378889888777 99999998764322 23566664221 11000 011223456889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 86 ~~V~A 90 (116)
T 2edb_A 86 ISLKA 90 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.31 Score=44.60 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=47.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+.+...+.++++|.|..... ...-.|+|....+...... ........+.|++|+|++.|.++
T Consensus 113 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~ 181 (290)
T 3r8q_A 113 VSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIY 181 (290)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----------EECTTCSEEEECSCCTTCEEEEE
T ss_pred CCCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----------ecCCCccEEEECCCCCCCEEEEE
Confidence 36788898887789999999998643 2334566765543211110 01122334678999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 182 V~A 184 (290)
T 3r8q_A 182 LYT 184 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.079 Score=46.30 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=45.6
Q ss_pred CCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..+.+... +.+++.|.|....... .-.|+|.............. ...+....++|++|+|+
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~ 174 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 174 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCC
Confidence 4557888888754 5789999998764322 23566665532111111000 00222345689999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
|.|.+||..
T Consensus 175 t~Y~~~V~A 183 (215)
T 1bqu_A 175 TEYVFRIRC 183 (215)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.14 Score=47.10 Aligned_cols=74 Identities=9% Similarity=0.031 Sum_probs=49.1
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.+++.|.|..... ...-.|+|............ ........+.|++|+|++.|.
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----------NLAPDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----------EECTTCCEEEECSCCSSCEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----------EcCCCccEEEeCCCCCCCEEE
Confidence 4456899998887889999999998742 23346777765422211111 011224457889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|+|..
T Consensus 89 ~~V~a 93 (290)
T 3r8q_A 89 VSVYA 93 (290)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.61 E-value=0.14 Score=43.63 Aligned_cols=71 Identities=14% Similarity=0.218 Sum_probs=45.8
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.+++.|.|....... .-.|+|............ . . ......|++|+|++
T Consensus 102 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t 169 (197)
T 3lpw_A 102 RPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-T---------V--KVTEATITGLIQGE 169 (197)
T ss_dssp CCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-E---------E--SSSEEEECCCCTTC
T ss_pred CCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-c---------c--cccEEEeCCcCCCC
Confidence 34578888888777999999999764322 235666654332211111 0 0 12235789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|+|..
T Consensus 170 ~Y~~~V~A 177 (197)
T 3lpw_A 170 EYSFRVSA 177 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.31 Score=42.38 Aligned_cols=83 Identities=10% Similarity=0.134 Sum_probs=52.7
Q ss_pred CCCCCCceEEEEecC----CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEE
Q 013955 38 KPSSHPQQVHISLAG----DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTV 105 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~----~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 105 (433)
.....|..+.+.... .+++.|.|....... .-.|+|....+. .+.... .+......
T Consensus 101 v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~-~~~~~~-----------~~~~~~~~ 168 (210)
T 3n06_B 101 VQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA-EWEIHF-----------AGQQTEFK 168 (210)
T ss_dssp BCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS-SCEEEE-----------EETCSEEE
T ss_pred EecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC-CCEEEe-----------ccCceEEE
Confidence 456688888887643 589999999865322 234566654332 111110 01123567
Q ss_pred eCCCCCCCEEEEEecc---------cCCeeEEECCC
Q 013955 106 IGPLEHDTVYFYRCGR---------QGPEFEFKTPP 132 (433)
Q Consensus 106 l~~L~p~t~Y~Y~v~~---------~s~~~~F~T~p 132 (433)
|.+|+|++.|.+||.. +|+...|+|+.
T Consensus 169 l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 169 ILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred EeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 8999999999999863 35667888865
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.35 E-value=0.15 Score=44.10 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=43.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+..|..+.+.. +.++++|.|.-.... ..-.|+|........+...... .++......+ +|+|++.|
T Consensus 6 P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~--------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 6 PNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK--------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE--------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec--------cCCCceEEEE-eCCCCCEE
Confidence 34899999998 999999999976322 2235667654322222111110 0111123345 89999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.094 Score=42.02 Aligned_cols=69 Identities=14% Similarity=0.229 Sum_probs=44.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++.-.. +++.|.|.-..... .-.|+|.... .... . . .........+|++|+|++.|
T Consensus 28 P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~--~~~~------~-~---~~~~~~~~~~i~~L~p~t~Y 94 (126)
T 1x5i_A 28 PEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGS--PHAQ------T-I---KVDYKQRYYTIENLDPSSHY 94 (126)
T ss_dssp CCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSC--GGGE------E-E---ECCTTCCEEEECSCCSSCEE
T ss_pred CCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCC--CCce------E-E---EeCCCeeEEEEeCCCCCCEE
Confidence 3488899888765 99999999875322 2345565211 0100 0 0 11233455789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.++|..
T Consensus 95 ~~~V~A 100 (126)
T 1x5i_A 95 VITLKA 100 (126)
T ss_dssp CCEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.16 E-value=0.16 Score=44.19 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=45.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
....|..+.+...+.+++.|.|...... ..-.|+|....+ .+..... ..+....+.|++|+|++.
T Consensus 109 ~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~~---------~~~~~~~~~i~~L~p~t~ 177 (209)
T 2vkw_A 109 EPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS--EWKPEIR---------LPSGSDHVMLKSLDWNAE 177 (209)
T ss_dssp SCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS--CCCCCEE---------ECTTCCEEEECSCCTTCE
T ss_pred CCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCC--CCceeee---------cCCCccEEEecCCCCCCE
Confidence 3557777777766689999999986322 234567766221 1110000 112223467899999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.|||..
T Consensus 178 Y~~~V~A 184 (209)
T 2vkw_A 178 YEVYVVA 184 (209)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.14 E-value=0.11 Score=45.39 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=44.0
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeee--eecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLF--YRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+++...+.++++|.|.-...... -.|+|........+........+.... ........+.|++|+|++.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 455666665678999999987643222 345555543212222111100000000 00123556789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=94.13 E-value=0.15 Score=48.64 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=48.6
Q ss_pred CCCCCceEEEEecCCC-cEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 39 PSSHPQQVHISLAGDS-HMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~-~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
|...|..+.+...+.+ ++.|.|.-.. ....-.|+|....+......... .......+.|++|+|++.|
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEE
Confidence 4568999988877777 9999999764 22334677776543221111100 1122345678999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|+|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=94.09 E-value=0.19 Score=43.94 Aligned_cols=85 Identities=11% Similarity=0.115 Sum_probs=51.7
Q ss_pred CCCCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEe
Q 013955 38 KPSSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 38 ~~~~~p~qv~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
.....|..+.+... ..+++.|.|....... .-.|+|. .........+. . ..+....+.|
T Consensus 107 v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~-~---------~~~~~~~~~l 176 (215)
T 1cd9_B 107 VKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF-H---------LPSSKDQFEL 176 (215)
T ss_dssp BCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE-E---------EESCEEEEEE
T ss_pred eEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe-c---------ccCcceEEEE
Confidence 35667888877654 4778999998764321 2356776 44322111111 0 0122456789
Q ss_pred CCCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 107 GPLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
.+|+|++.|.+||.. +|....|+|+.
T Consensus 177 ~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 177 CGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 999999999999863 24455676654
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.09 E-value=0.13 Score=47.82 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.....|..+.+... +.+++.|+|....... .-.|+|...... .+...... ..........|++|+|
T Consensus 198 ~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~-~w~~~~~~-------~~~~~~~~~~l~~L~p 269 (303)
T 1i1r_A 198 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS-TWSQIPPE-------DTASTRSSFTVQDLKP 269 (303)
T ss_dssp EECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCS-SCEECCGG-------GGCSCCSEEEECSCCT
T ss_pred EecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCC-CceEEccc-------cCCCceeEEEeCCCCC
Confidence 35567888887754 4789999999764322 235667665422 11111000 0012234568999999
Q ss_pred CCEEEEEecc-----------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|.|.+||.. +|+...|+|+.
T Consensus 270 ~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 270 FTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp TCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999999864 24566787764
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.31 Score=49.48 Aligned_cols=82 Identities=17% Similarity=0.275 Sum_probs=50.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.++++|+|..+.... .-.|+|........... ..+....++|+||+|+|.|
T Consensus 441 ~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~------------v~~~~ts~~l~gL~P~T~Y 508 (536)
T 3fl7_A 441 QTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNV------------RRTEGFSVTLDDLAPDTTY 508 (536)
T ss_dssp SCCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEE------------EEESSSEEECCSCCSSCEE
T ss_pred ccCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEE------------EcCCCCEEEECCCCCCCEE
Confidence 3467777776566899999999764322 23567766543211000 0111234678999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.++|.. .|+...|+|++.
T Consensus 509 ~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 509 LVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 999964 356778888763
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=93.46 E-value=0.041 Score=42.10 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=39.7
Q ss_pred EEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 48 ISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
++-.++++++|+|...... ..-.|+|....+.... .. . ..++....+.|+||+|||.|...|..
T Consensus 14 vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~-~~-----~----~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 14 VTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEP-QY-----L----DLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCC-EE-----E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcc-eE-----E----ECCCCccEEEECCCCCCCEEEEEEEE
Confidence 3434578999999876422 3346677766432110 00 0 12233456789999999999999854
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.10 E-value=0.59 Score=41.66 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=54.2
Q ss_pred CCCCCCCceEEEEecC-CCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 37 PKPSSHPQQVHISLAG-DSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
...+..|..+.+.... ..++.|.|..+.... .-.|+|........+.... .......+.+.+|
T Consensus 110 iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~----------~~~t~~~i~l~~L 179 (223)
T 3up1_A 110 IVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN----------LSSTKLTLLQRKL 179 (223)
T ss_dssp SBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE----------ESSSEEEEEGGGS
T ss_pred eEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE----------ecCceeEEecccc
Confidence 3455588888888765 678999999874221 2356676653212222110 1122334567899
Q ss_pred CCCCEEEEEecc------------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR------------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~------------~s~~~~F~T~p~ 133 (433)
+|++.|..||.. +|....|+|++.
T Consensus 180 ~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 180 QPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp CTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 999999999853 245577888663
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.09 E-value=0.29 Score=46.42 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=46.6
Q ss_pred CCCCceEEEEecCCC-cEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 40 SSHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~-~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
...|..+.+.-.+.+ ++.|.|..... ...-.|+|....+......... ..+....+.|++|+|++.|.
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEE
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEE
Confidence 457889988866655 69999998642 2334677766543211111100 12223457899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|+|..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=93.06 E-value=0.72 Score=40.80 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=46.6
Q ss_pred CCCCCceEEEEecC-CCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..|++...+ .+++.|.|....... .-.|+|............. .......+.|.+|+||
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~ 190 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVE----------ILEGRTECVLSNLRGR 190 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEE----------ECTTCCEEEECCCCSS
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEE----------EecCceEEEEcccCCC
Confidence 45689999988765 789999999875321 2356676543221111000 0111235778999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|..||..
T Consensus 191 t~Y~vqVRa 199 (227)
T 1eer_B 191 TRYTFAVRA 199 (227)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 999999863
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=92.62 E-value=0.12 Score=51.31 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+++.-.+.++++++|..+.. ...-.|+|..+..... .. +.. ..+-..+++|+||+|||.|..+
T Consensus 371 ~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~---~~~---~~~~~~~~~i~~L~p~t~Y~~~ 440 (461)
T 3csg_A 371 SVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSP----VQ---EFT---VPGSKSTATISGLSPGVDYTIT 440 (461)
T ss_dssp CSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC----CE---EEE---EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc----ce---EEE---ecCCCceEEecCCCCCCEEEEE
Confidence 4688899998889999999987621 1234677776642110 00 000 1122356899999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 441 v~a 443 (461)
T 3csg_A 441 VYA 443 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.22 E-value=0.5 Score=43.91 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=50.9
Q ss_pred CCCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 39 PSSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 39 ~~~~p~qv~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
....|..+.+... ..+++.|+|....... .-.|+|. ..... .+..... .......+.|+
T Consensus 202 ~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~-~w~~~~~---------~~~~~~~~~l~ 271 (313)
T 2d9q_B 202 KLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEA-SWALVGP---------LPLEALQYELC 271 (313)
T ss_dssp ECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCC-CCEEEEE---------ECSCEEEEEEC
T ss_pred ccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCC-CcEEccc---------ccCcceEEEEe
Confidence 3557877766643 3589999999764221 2456776 43322 2221111 12235667899
Q ss_pred CCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 108 PLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|+|+|.|.+||.. +|+...++|+.
T Consensus 272 ~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 272 GLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp SCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 99999999999863 23455677754
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.15 E-value=0.31 Score=38.41 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=49.2
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC--CCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE--SSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..++..|..+.+.. ..+++.|.|.-... ... -.|.|........... .... ..+.+. |
T Consensus 15 e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~-----------~~~~--~~~~~~-L 79 (117)
T 1wj3_A 15 KTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL-----------NTNK--TSAELV-L 79 (117)
T ss_dssp CCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE-----------EESS--SEEEEE-C
T ss_pred CCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE-----------eCCC--cEEEEE-C
Confidence 345666777776665 67889999987621 222 2445654432211100 0111 245666 9
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
+|++.|.+||.. .|+...|+|...
T Consensus 80 ~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 80 PIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 999999999964 245667887653
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=92.08 E-value=0.53 Score=44.79 Aligned_cols=84 Identities=18% Similarity=0.302 Sum_probs=47.3
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+...|. +.....+.++++|.|.-..... .-.|+|........ .... ...+......|++|+|++.
T Consensus 293 ~p~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~~~---------~~~~~~~~~~i~~L~~~t~ 361 (389)
T 2jll_A 293 EPSPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQ-WLEK---------KVQGNKDHIILEHLQWTMG 361 (389)
T ss_dssp CCCCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----C-CBCC---------EECTTCCEEEECSCCTTCE
T ss_pred CCCCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcc-eeEe---------eccCCcceEEeCCcCCCCE
Confidence 444553 5555557899999998653222 23556655322111 1000 1122234568899999999
Q ss_pred EEEEeccc-----C--CeeEEECCCC
Q 013955 115 YFYRCGRQ-----G--PEFEFKTPPA 133 (433)
Q Consensus 115 Y~Y~v~~~-----s--~~~~F~T~p~ 133 (433)
|.|||... | ....|+|++.
T Consensus 362 Y~~~V~A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 362 YEVQITAANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEEEEEEEC-CCBCCCEEEEEECCCC
T ss_pred EEEEEEEEcCCcCCCceeeEecCCCC
Confidence 99999641 1 2347888663
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.93 E-value=0.56 Score=44.56 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=46.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
....|..+.+...+.+++.|.|..... ...-.|+|............ ...+......|+||+||+.|.+
T Consensus 277 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 346 (375)
T 3t1w_A 277 GLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVV 346 (375)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEE----------EEETTCCEEEECSCCTTCEEEE
T ss_pred CCCCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeE----------EcCCCccEEEECCCCCCCEEEE
Confidence 345788888876678999999998533 23346777765431111100 0112233568899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 347 ~V~A 350 (375)
T 3t1w_A 347 SIVA 350 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=91.78 E-value=1.4 Score=41.57 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=46.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+...+.+++.|.|...... ..-.|+|............ ..........|++|+|++.|.|
T Consensus 185 ~~~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 254 (368)
T 1fnf_A 185 GLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVV 254 (368)
T ss_dssp CCCCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----------EEETTCCEEEEESCCTTCEEEE
T ss_pred CCCCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEE----------EeCCCcCEEEECCCCCCCEEEE
Confidence 3457888877766789999999876432 2345667655432111100 0112233467889999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 255 ~V~A 258 (368)
T 1fnf_A 255 SIVA 258 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=91.39 E-value=0.25 Score=43.79 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=45.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++...+.+++.|.|.-..... .-.|+|.......... +...... ..........|++|+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 357888888778899999998654322 2356666544321110 0000000 111223456889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.73 E-value=0.49 Score=41.29 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=43.2
Q ss_pred CCCCCCCCCceEEEEec-CCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 35 WDPKPSSHPQQVHISLA-GDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~-~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
.+......|..+++... ..+++.|.|..+.... .-.|+|........+..... .......+.|.+|+
T Consensus 105 ~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~---------~~~~~~~~~l~~L~ 175 (206)
T 3v6o_A 105 DSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV---------YDAKSKSVSLPVPD 175 (206)
T ss_dssp GGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE---------CC---CEEEECCSC
T ss_pred cceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec---------ccCcceeEEeecCC
Confidence 33445567887877765 4789999999874322 23466665532112211110 11112357899999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
||+.|.+||..
T Consensus 176 p~t~Y~vqVRa 186 (206)
T 3v6o_A 176 LCAVYAVQVRC 186 (206)
T ss_dssp TTSCEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999999964
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.66 E-value=0.85 Score=39.42 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+. ...+++++.|...... ..+ .|+|............-. . ..........|.+|+|++
T Consensus 113 ~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~-----~--~~~~~~~~l~i~~L~~~~ 184 (215)
T 3mtr_A 113 TPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-----A--KEASMEGIVTIVGLKPET 184 (215)
T ss_dssp CCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEE-----H--HHHHHHTEEEEECCCTTC
T ss_pred CCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccc-----c--ccccccccEEECCCCCCC
Confidence 34456666554 3467899999854321 222 366665543221111100 0 000111456789999999
Q ss_pred EEEEEecc--------cCCeeEEECCCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|.|||.. .|....|+|+|.
T Consensus 185 ~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 185 TYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEEEEeCCcccCcccceeeEeccc
Confidence 99999964 256678999874
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.53 E-value=0.14 Score=37.04 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=37.7
Q ss_pred EEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc-------cCCeeEE
Q 013955 58 VTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR-------QGPEFEF 128 (433)
Q Consensus 58 i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~-------~s~~~~F 128 (433)
|.|..+.. ...-.++|.++.....+... ..++-.+.-+|.||+||.+|.=++.+ ....+.|
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev----------~IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfdf 71 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDF 71 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEE----------EECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEE----------EcCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEEE
Confidence 46764422 24456778877654332211 12333444468899999999998754 1245777
Q ss_pred ECC
Q 013955 129 KTP 131 (433)
Q Consensus 129 ~T~ 131 (433)
+|-
T Consensus 72 TT~ 74 (89)
T 1q38_A 72 TTT 74 (89)
T ss_dssp CSS
T ss_pred Eec
Confidence 774
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=89.37 E-value=1.3 Score=45.35 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=47.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|....++-.+.++++++|..+... ..-.||+....+..+..+ +.+ ... ..+++||.||+
T Consensus 9 ~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v-~~~---------~~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 9 EPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPC-AKS---------RYT--YTTIEGLRAGK 76 (573)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEE-EEE---------SSS--EEEECCCCTTC
T ss_pred CCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEe-ccc---------cCC--EEEeCCCCCCC
Confidence 3446777778888899999999976422 224667777665433332 221 111 24689999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 77 ~Y~FRV~A 84 (573)
T 3uto_A 77 QYEFRIIA 84 (573)
T ss_dssp EEEEEEEE
T ss_pred cEeEEEEE
Confidence 99999964
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.24 E-value=0.32 Score=41.91 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=39.3
Q ss_pred eEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 45 QVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 45 qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
.+.+...+.+++.|.|.-.... ..-.|+|......... .. . ...+....+.|+||+|++.|.++|..
T Consensus 117 ~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~-~~-----~----~v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 117 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEP-QY-----L----DLPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCC-EE-----E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCce-eE-----E----EcCCceeEEEeCCCCCCCEEEEEEEE
Confidence 3445545588999999766321 1235566643221111 00 0 01223445789999999999999864
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.20 E-value=0.64 Score=46.62 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=54.3
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
..+..|..+++....++++.|.|..+..... -.|+|...... ....... .. ......+.+.|.+|+|+|
T Consensus 385 v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~-~w~~~~~-----~~-~~~~~~~~v~l~~L~P~T 457 (488)
T 2q7n_A 385 VAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSK-KEVRNAT-----IR-GAEDSTYHVAVDKLNPYT 457 (488)
T ss_dssp BCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSC-CEEEEEE-----EE-CCEEEEEEEEECSCCSSC
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCC-CceEEEE-----Ee-cCCCcEEEEEeCCCCCCc
Confidence 3556888898887678999999998743322 24556554321 1111000 00 001235667999999999
Q ss_pred EEEEEecc----------cCCeeEEECCC
Q 013955 114 VYFYRCGR----------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~----------~s~~~~F~T~p 132 (433)
.|.+||.. +|+...|+|++
T Consensus 458 ~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 458 AYTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp CBBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred eEEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 99999853 24455677765
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.94 E-value=0.35 Score=48.46 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=54.5
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
..+..|..+++....++++.|.|..+... -.-.|+|........... .... ......+.+.|.+|+|+|
T Consensus 380 VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~------vsv~-~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 380 VYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRN------VTIQ-GVENSSYLVALDKLNPYT 452 (483)
T ss_dssp BCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEEE------CCCB-CCSSSBCCCCCCSCCSSS
T ss_pred cCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceEE------EEEe-ccCCceeEEEEeccCCCc
Confidence 34568888888755688999999987532 235788877643211110 0000 011123456789999999
Q ss_pred EEEEEecc----------cCCeeEEECCC
Q 013955 114 VYFYRCGR----------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~----------~s~~~~F~T~p 132 (433)
.|..||.. +|+...|+|+.
T Consensus 453 ~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 453 LYTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp SCEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 99999864 24456677654
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.92 E-value=1.9 Score=45.02 Aligned_cols=79 Identities=10% Similarity=0.148 Sum_probs=46.7
Q ss_pred CCCCCCceEEEEec--CCC---cEEEEEEcCCCCC----CcEEEEecc-CCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 38 KPSSHPQQVHISLA--GDS---HMRVTWITDDESS----PSVVEYGTS-PGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 38 ~~~~~p~qv~l~~~--~~~---~~~i~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
.+...|..+.+... +.+ +++|.|.-..... .-.|+|... ....... ....... ...+....++|+
T Consensus 265 ~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~----~v~~~~~~~~l~ 339 (680)
T 1zlg_A 265 SAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRK----TTDGFQNSVILE 339 (680)
T ss_pred CCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEE----EEcCCeeEEEeC
Confidence 56778899988876 567 9999999653222 234555521 1000000 0000000 122344678899
Q ss_pred CCCCCCEEEEEecc
Q 013955 108 PLEHDTVYFYRCGR 121 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (433)
+|+|++.|.+||..
T Consensus 340 ~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 340 KLQPDCDYVVELQA 353 (680)
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999964
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=88.80 E-value=1.6 Score=39.58 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=43.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+... .+++.|+|.-... ...-.|+|............ +.. ..........+++|+|++.|.+
T Consensus 101 ~~~p~~~~~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~L~p~t~Y~~ 172 (290)
T 3l5i_A 101 ATHPVMDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQ--EDGTVHRTYLRGNLAESKCYLI 172 (290)
T ss_dssp CCCCCEEEEEEEE-TTEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE-----EEE--EETTCSEEECCSCCCTTCEEEE
T ss_pred CCCccceeEEEeC-CCeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC-----eEE--ccCCCcceEEecCcCCccEEEE
Confidence 3444556655544 4799999987753 23346777665432110000 000 1123344567899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 173 ~V~A 176 (290)
T 3l5i_A 173 TVTP 176 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.76 E-value=0.73 Score=45.51 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=49.3
Q ss_pred CCeEEEEEecCCCCCC------hHHHHHHhhcC-CCceEEccccccccccc----------------hhhHHHhh-hhhh
Q 013955 135 FPITFAVAGDLGQTGW------TKSTLDHIGQC-KYDVHLLPGDLSYADYM----------------QHRWDTFG-ELVQ 190 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~------~~~~l~~i~~~-~pd~vl~~GD~~~~~~~----------------~~~w~~~~-~~~~ 190 (433)
.++++++.+..-.... ...+++.+++. +||.+|++|.+++.... ...++.++ ..+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 6799999998854432 23566777664 89999999999976532 12233333 3333
Q ss_pred hhh----hCCCceeccCCCcCC
Q 013955 191 PLA----SARPWMVTQGNHEKE 208 (433)
Q Consensus 191 ~l~----~~iP~~~v~GNHD~~ 208 (433)
++. ..+-++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 333 346689999999995
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.70 E-value=2.5 Score=44.36 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=55.6
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...++++++|.|.-.... ..-.|+|.............. .. ........+.|++|+
T Consensus 357 ~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~----~~--~~~~~~~~~~i~~L~ 430 (731)
T 2v5y_A 357 ADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV----SW--DTENSHPQHTITNLS 430 (731)
T ss_dssp CCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE----EC--CSSCSSCEEEECSCC
T ss_pred CCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE----EE--EecCCcceEEECCCC
Confidence 345577999988877899999999876321 123577766543211111000 00 112234457899999
Q ss_pred CCCEEEEEecc-------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
|++.|.++|.. .+....++|+.
T Consensus 431 p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 431 PYTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp SSCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 99999999864 24556777743
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=87.51 E-value=2.1 Score=37.24 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=46.1
Q ss_pred CCCCCCCCCceEEEEecCCCcEEEEEEcCCCC-------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDES-------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
...-....|..+.+....+....|+|..+... -.-.|+|......-.. .... .........+.+.
T Consensus 93 ~~iVkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~-~~~~-------~~~~~~~~~~~~~ 164 (207)
T 1iar_B 93 SEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADF-RIYN-------VTYLEPSLRIAAS 164 (207)
T ss_dssp GGSBCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCE-EEEE-------ECSSCCEEEECC-
T ss_pred ccccccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhh-eeee-------eecCCcEEEEEHH
Confidence 33445668888888754466899999987421 1245677665432111 1110 0122345556677
Q ss_pred CCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 108 PLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|.||+.|..||.. +|....|+|.+
T Consensus 165 ~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~ 200 (207)
T 1iar_B 165 TLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSY 200 (207)
T ss_dssp ----CCCEEEEEEEECGGGTCCCCCCCCCEEEC---
T ss_pred HCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCC
Confidence 99999999999963 34567777754
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.97 E-value=2.3 Score=37.36 Aligned_cols=90 Identities=11% Similarity=0.212 Sum_probs=53.8
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCC---------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEe
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDES---------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
.......|..+.+.. .+.+.|.|..+... -.-.|+|......-........ . ...+....+.+
T Consensus 97 ~iVkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~~-----~-~~~~~~~~~~~ 168 (219)
T 3tgx_A 97 ESIKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKL-----I-SVDSRSVSLLP 168 (219)
T ss_dssp GCBCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEEE-----E-CSSCSEEEECT
T ss_pred eeEEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceeccccee-----E-ecCCCEEEEEe
Confidence 334555788777773 46899999987431 1245677766421111101110 0 11234556778
Q ss_pred CCCCCCCEEEEEecc--------------cCCeeEEECCCC
Q 013955 107 GPLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------------~s~~~~F~T~p~ 133 (433)
.+|.||+.|..||.. +|....|+|++.
T Consensus 169 ~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 169 LEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp TSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred ccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 899999999999952 255677888764
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=86.39 E-value=1 Score=40.22 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=42.4
Q ss_pred CCCCCCceEEEEecC--CC----cEEEEEEcCCCC--------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEE
Q 013955 38 KPSSHPQQVHISLAG--DS----HMRVTWITDDES--------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~----~~~i~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
.....|..+.++... .+ .+.|.|..+... -.-.|+|...... .+.... ......
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~-~w~~~~-----------~~~~~~ 196 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNET-KWKMMD-----------PILTTS 196 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCS-SCEECC-----------CBSSSE
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCC-ceEEEe-----------ccCCCE
Confidence 345578888655433 22 499999987532 1234566655321 111110 111235
Q ss_pred EEeCCCCCCCEEEEEecc
Q 013955 104 TVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~ 121 (433)
+.|.+|+||+.|..||..
T Consensus 197 ~~l~~L~p~t~Y~vqVRa 214 (236)
T 1axi_B 197 VPVYSLKVDKEYEVRVRS 214 (236)
T ss_dssp EEEEEEETTSCEEEEEEE
T ss_pred EEEeccCCCCEEEEEEEE
Confidence 678899999999999964
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=85.90 E-value=1.2 Score=38.55 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=45.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC-CCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L-~p~t 113 (433)
.+...|..+.+...+.++++++|.-..... .-.|+|........ .+. ...+....+.|++| .|++
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t 74 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFV 74 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTS
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccc
Confidence 345678888877667789999999775432 23455544321100 000 01222345789999 9999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.++|..
T Consensus 75 ~Y~~~V~A 82 (215)
T 1bqu_A 75 NIEVWVEA 82 (215)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 99999865
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.13 E-value=0.4 Score=48.85 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=44.5
Q ss_pred CCCCCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~--~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..+.+.. ...+++.|.|........ -.|+|.............. ..........|++|+|+
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~ 269 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 269 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCC
Confidence 455777787753 347899999986642222 3556665542211111000 01122345678999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.+||..
T Consensus 270 t~Y~~~V~a 278 (589)
T 3l5h_A 270 TEYVFRIRC 278 (589)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=84.74 E-value=6.5 Score=36.95 Aligned_cols=83 Identities=20% Similarity=0.161 Sum_probs=49.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+.-.+.+++.+.|...... ..+ .|+|........... ...+......|.+|+|++
T Consensus 195 ~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~l~~~~ 263 (389)
T 2jll_A 195 VPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIV-----------RSHGVQTMVVLNNLEPNT 263 (389)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEE-----------ECSTTCSEEEECSCCTTC
T ss_pred CCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEe-----------eccCCcceEEECCccCCC
Confidence 3446767777766788999999854322 212 355555432211111 112233456789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|+|.. .+....++|.+
T Consensus 264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 264 TYEIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCcceEEEecC
Confidence 99999864 13456677744
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=84.40 E-value=2.8 Score=39.06 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=45.6
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 39 PSSHPQQVHISLAG--DSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 39 ~~~~p~qv~l~~~~--~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
....|..+.+...+ ++++.|+|.-.... -.-.|+|............ .......+.|.+|+
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~-----------~~~~~~~~~l~~L~ 264 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAW 264 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCC
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEc-----------ccCCceEEEEeCCC
Confidence 45678888888754 46999999987531 1235667665322111111 01112356789999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.+||..
T Consensus 265 p~t~Y~~rVrA 275 (325)
T 1n26_A 265 SGLRHVVQLRA 275 (325)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999964
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=84.33 E-value=3.6 Score=38.04 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=45.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEee---eeEEeeeeeecCeEEEEEeCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGE---STSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
....|..+++. ...+++.|.|..+..... -.|+|.............. +.... ..........+.|.+|+|
T Consensus 199 ~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~-~~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 199 KPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPE-FERNVENTSCFMVPGVLP 276 (314)
T ss_dssp ECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTT-SSCCCSSEEEEEEESCCT
T ss_pred eeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccc-cccccCCceEEEEccCCC
Confidence 35678888887 557899999998853222 3466665433211110000 00000 000113456778999999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.+||..
T Consensus 277 ~t~Y~~qVra 286 (314)
T 3bpo_C 277 DTLNTVRIRV 286 (314)
T ss_dssp TSCEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999999864
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=83.73 E-value=10 Score=36.64 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=51.4
Q ss_pred CCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
.+......|..|.+...+ +.+.|+|....... .-.|+|.... ......... ........+
T Consensus 104 ~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--------~~~~~~~~~ 173 (419)
T 2gys_A 104 TQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--------LSNTSQATL 173 (419)
T ss_dssp GGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--------EESSSEEEE
T ss_pred HHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--------cccceEEEe
Confidence 334466779999888765 69999999875321 1345666553 111111100 012223333
Q ss_pred EeCCCCCCCEEEEEecc--------------cCCeeEEECCCC
Q 013955 105 VIGPLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~--------------~s~~~~F~T~p~ 133 (433)
.+.+|.|++.|..||.. +|+...|+|++.
T Consensus 174 ~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 174 GPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp CTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred chhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 44499999999999863 134567777654
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=83.68 E-value=3.3 Score=35.59 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=46.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.....|..+++.......+.|.|..+... -.-.|+|....+........ .......|.+|.|++.|
T Consensus 97 VkP~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y 164 (199)
T 2b5i_C 97 VIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRY 164 (199)
T ss_dssp EECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCE
T ss_pred eecCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEE
Confidence 34667888888866677999999987521 12357887654322211110 11234567899999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
..||..
T Consensus 165 ~vqVR~ 170 (199)
T 2b5i_C 165 TFRVRS 170 (199)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.59 E-value=2.7 Score=43.89 Aligned_cols=78 Identities=13% Similarity=0.205 Sum_probs=42.9
Q ss_pred CCCC-ceEEEEecCCCcEEEEEEcCCCC-CC---cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHP-QQVHISLAGDSHMRVTWITDDES-SP---SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p-~qv~l~~~~~~~~~i~W~t~~~~-~~---~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
...| ..+.+.-.+.++++|.|...... .. -.|+|....+.... ......+... .......+.|++|+|++.
T Consensus 160 P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~--~~~~~~w~~v--~~~~~~~~~i~~L~P~t~ 235 (680)
T 1zlg_A 160 PLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPS--EDDATHWQTV--AQTTDERVQLTDIRPSRW 235 (680)
T ss_pred cccccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcC--ccccCceEEE--EecCCCeEEeCCCCCCCE
Confidence 3457 67877767799999999975221 11 34556544220000 0000000000 011223467899999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.|||..
T Consensus 236 Y~frV~A 242 (680)
T 1zlg_A 236 YQFRVAA 242 (680)
T ss_pred EEEEEEE
Confidence 9999864
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=80.53 E-value=6.7 Score=35.15 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=45.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.....|..+.+.......+.|.|..+.... .-.|+|....+........ .......|.+|.|++.|
T Consensus 135 VkP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~------------~~~~~~~l~~L~p~~~Y 202 (247)
T 2erj_C 135 VIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRY 202 (247)
T ss_dssp EECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE------------CSSCEEEESCCCTTSCE
T ss_pred EEeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec------------CCceEEEecCCCCCCEE
Confidence 345678888888666779999999885211 1247777644322211110 11224567899999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
..||..
T Consensus 203 ~vqVR~ 208 (247)
T 2erj_C 203 TFRVRS 208 (247)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999963
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=80.01 E-value=3.3 Score=42.60 Aligned_cols=93 Identities=16% Similarity=0.317 Sum_probs=49.6
Q ss_pred CCCceEEEE-e-cCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeee--------EE--eeeeeec------CeEE
Q 013955 41 SHPQQVHIS-L-AGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGEST--------SY--RYLFYRS------GKIH 102 (433)
Q Consensus 41 ~~p~qv~l~-~-~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~--------~~--~~~~~~~------~~~~ 102 (433)
..|..+.+- . .+++++++.|..++. ......|....+. ......... .| .|..... -..+
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAG-KLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVMQ 113 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETT-EEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCCCC
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECC-EEeEeeccccccccccccccccccccccccccceeeee
Confidence 368777652 1 247899999998854 3344555544321 111000000 00 0000000 1246
Q ss_pred EEEeCCCCCCCEEEEEecc---------cCCeeEEECCCCCC
Q 013955 103 HTVIGPLEHDTVYFYRCGR---------QGPEFEFKTPPAQF 135 (433)
Q Consensus 103 ~v~l~~L~p~t~Y~Y~v~~---------~s~~~~F~T~p~~~ 135 (433)
+..+++|+|+|+|.|+|.. +++.-..+|.+...
T Consensus 114 ~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~~~ 155 (608)
T 2uvf_A 114 NFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKPQ 155 (608)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCCCC
T ss_pred eEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccCCC
Confidence 7888999999999999964 23445566655433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 433 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 2e-83 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-31 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-29 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 4e-17 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-08 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 6e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-04 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 3e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.003 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 256 bits (655), Expect = 2e-83
Identities = 129/295 (43%), Positives = 165/295 (55%), Gaps = 19/295 (6%)
Query: 136 PITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYAD----YMQHRWDTFGELV 189
P TF + GDLGQ+ + +TL H K L GDLSYAD + RWDT+G
Sbjct: 7 PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFT 66
Query: 190 QPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAH 247
+ + +PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH
Sbjct: 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAH 126
Query: 248 LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAI 307
+I+L SY+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M
Sbjct: 127 IIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTK 186
Query: 308 MEPLLYAASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKE 356
E VD+V AGHVHAYERS RV+N D VYITIGD GN
Sbjct: 187 FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 246
Query: 357 GLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411
+ PQP++S FREASFGHG I N THA +SW+RN D V +D +W
Sbjct: 247 VIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 301
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 113 bits (285), Expect = 2e-31
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGD--SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 109 bits (273), Expect = 1e-29
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWIT-DDESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 79.4 bits (194), Expect = 4e-17
Identities = 50/292 (17%), Positives = 82/292 (28%), Gaps = 48/292 (16%)
Query: 136 PITFAVAGDLG-----------QTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
+ F GD G + K+ + D L GD Y + D
Sbjct: 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 63
Query: 185 ------FGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
P PW V GNH+ A+ + RW P
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 123
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 124 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVL 180
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343
V H P ++ A G ++ + PLL V L GH H + D G
Sbjct: 181 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ-------DENG 231
Query: 344 AVYITIGDGGNKEGLARKYKNPQPD----WSVFREASFGHGELKIVNSTHAF 391
++ G G + + + + G ++I +
Sbjct: 232 LGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSV 283
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 52.8 bits (125), Expect = 3e-08
Identities = 34/252 (13%), Positives = 64/252 (25%), Gaps = 61/252 (24%)
Query: 152 KSTLDHIGQCKYDVHLLPGDLSYAD--YMQHRWDTFGELVQPLASAR-PWMVTQGNHEKE 208
+ + + + + GD+ ++ L + GNHE
Sbjct: 39 RDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFY 98
Query: 209 SIPLIMDAFQSYNARWKM----PFEESGSNSNLYYSFDVAGAHLIMLGSY---------- 254
+ N+ + + G + Y ++L +Y
Sbjct: 99 NFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEE 158
Query: 255 ------------------------------------ADYDEYSDQYRWLKDDLSKVDRKK 278
+ Q +WL L+ D K+
Sbjct: 159 SEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 218
Query: 279 TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK 338
L + H+P + A++ L SV +AGH H R +
Sbjct: 219 ERVL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS--- 274
Query: 339 PDPCGAVYITIG 350
GA +IT+
Sbjct: 275 ----GAQHITLE 282
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 45.1 bits (105), Expect = 6e-06
Identities = 17/178 (9%), Positives = 38/178 (21%), Gaps = 6/178 (3%)
Query: 155 LDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
+ D L G+L D + P G + +
Sbjct: 25 VKLAPDTGADAIALIGNL--MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82
Query: 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKV 274
+A +M I + E W+ + K
Sbjct: 83 EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKA 142
Query: 275 DRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332
+ + + L ++ + +++ + LVL +
Sbjct: 143 LWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKT----HNPLLVLVAGKGQKHEML 196
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 14/171 (8%)
Query: 162 KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYN 221
+ D ++ GD+ + +++ P + GNH+ + F Y
Sbjct: 41 RPDAVVVSGDIVN-CGRPEEYQVARQILGS--LNYPLYLIPGNHDDK------ALFLEYL 91
Query: 222 ARWKMPFEESGSNSNLYYSFDVAGAHLIMLG-SYADYDEYSDQYRWLKDDLSKVDRKKTP 280
+N+ + D L+ + S A + + +++
Sbjct: 92 QPLCPQL--GSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDK 149
Query: 281 WLLVLLHVPWYNSNEAH--QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329
+ +H P A + ++ + S+ + GH H+
Sbjct: 150 PATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.8 bits (91), Expect = 3e-04
Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 15/181 (8%)
Query: 152 KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209
L+ + Q + D + GDL+ R +
Sbjct: 33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRK-----------LRGLVEPFAAQLGAE 81
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWL 267
+ +M K +E+ S + L + G +I+L + + +
Sbjct: 82 LVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141
Query: 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327
+L L H P + + A + +L V +LAGH+H
Sbjct: 142 WLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHY 201
Query: 328 Y 328
Sbjct: 202 S 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.0 bits (84), Expect = 0.003
Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 11/191 (5%)
Query: 141 VAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200
V G++ + + + + + + + ++ F E+ V
Sbjct: 35 VVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREI---GELGVKTFV 91
Query: 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G ++ PL + +Y A P + F+V G ++ + D
Sbjct: 92 VPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS-- 316
RW + + K + P LV + + D +
Sbjct: 149 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSL 208
Query: 317 -VDLVLAGHVH 326
++ + GHV
Sbjct: 209 NPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 433 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.91 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.88 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.87 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.83 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.81 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.7 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.69 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.4 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.37 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.19 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.17 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.14 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.12 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.65 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.56 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.42 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.4 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.9 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.71 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.56 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.52 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.5 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.48 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.47 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.43 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.43 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.36 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.35 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.32 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.29 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.28 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.27 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.25 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.23 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.22 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 97.2 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.18 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.15 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 97.11 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.11 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.1 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.09 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.08 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 97.08 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.05 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.05 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.04 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 97.03 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.02 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.02 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.02 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.98 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.98 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.96 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.96 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.96 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.91 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.91 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.9 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.9 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.86 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.84 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.81 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.81 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.79 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.71 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.69 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.67 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.66 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.63 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.62 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.49 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.48 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.43 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.43 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.35 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.34 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.31 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.26 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.22 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.22 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.17 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.15 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.03 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.0 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.94 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.93 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 95.84 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.8 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.78 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.65 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.59 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.48 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 95.46 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.4 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.69 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 94.58 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 93.94 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.83 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 92.63 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 91.25 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 90.57 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 90.24 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 90.24 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 89.94 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 88.48 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 88.37 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 83.6 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 82.33 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=5.9e-56 Score=426.10 Aligned_cols=284 Identities=45% Similarity=0.764 Sum_probs=243.0
Q ss_pred CCCCCCCeEEEEEecCCCCCChHHHHHHh--hcCCCceEEccccccccccc----hhhHHHhhhhhhhhhhCCCceeccC
Q 013955 130 TPPAQFPITFAVAGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASARPWMVTQG 203 (433)
Q Consensus 130 T~p~~~~~~f~~~gD~~~~~~~~~~l~~i--~~~~pd~vl~~GD~~~~~~~----~~~w~~~~~~~~~l~~~iP~~~v~G 203 (433)
|.| +.|+||+++||+|........+..+ ...+|||||++||++|.++. ..+|+.|++.++++...+|+++++|
T Consensus 2 ~g~-~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~G 80 (312)
T d2qfra2 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAG 80 (312)
T ss_dssp CCS-SCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCC
T ss_pred CCC-CCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecc
Confidence 555 7799999999998776666666553 46789999999999986543 4689999999999988899999999
Q ss_pred CCcCCCCCc--ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCe
Q 013955 204 NHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPW 281 (433)
Q Consensus 204 NHD~~~~~~--~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~ 281 (433)
|||+...+. ....+..|..+|.+|.+......+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|
T Consensus 81 NHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 160 (312)
T d2qfra2 81 NHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPW 160 (312)
T ss_dssp GGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCE
T ss_pred cccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCE
Confidence 999854322 123566778889999876666678899999999999999999888888999999999999988778899
Q ss_pred EEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCcc-----------CCCccEEEEEC
Q 013955 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP-----------DPCGAVYITIG 350 (433)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~-----------~~~g~~yi~~G 350 (433)
+||++|+|+|++..........+++.|++||++++||++|+||+|.|+|++|+++++. +++|++||++|
T Consensus 161 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G 240 (312)
T d2qfra2 161 LIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIG 240 (312)
T ss_dssp EEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEEC
T ss_pred EEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEEC
Confidence 9999999999987655555667899999999999999999999999999999987652 46799999999
Q ss_pred CCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEEeCC
Q 013955 351 DGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSLV 414 (433)
Q Consensus 351 ~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~~~~ 414 (433)
+||+.++....+..++|.|+++++.+|||++|+|.|+|+|.|+|+++.||+..+.|+|||.|.-
T Consensus 241 ~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 241 DAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 304 (312)
T ss_dssp CSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTT
T ss_pred cCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCC
Confidence 9998776666777788999999999999999999999999999999999986556999999984
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=3.5e-34 Score=271.92 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=179.1
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhcCCCceEEccccccccccc----hhhHHHhhhh-hh-hhhhCC
Q 013955 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQCKYDVHLLPGDLSYADYM----QHRWDTFGEL-VQ-PLASAR 196 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~l~~i~~~~pd~vl~~GD~~~~~~~----~~~w~~~~~~-~~-~l~~~i 196 (433)
...+||+++||+|..... ..+.+.+++.+|||||++||++|..+. ..+|..+.+. .. .....+
T Consensus 2 ~~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 2 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCC
Confidence 357999999999865432 123344557899999999999987553 3345443322 22 234569
Q ss_pred CceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEe------CeEEEEEEcccCC---------C----
Q 013955 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD---------Y---- 257 (433)
Q Consensus 197 P~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~---------~---- 257 (433)
|+++++||||+.........+..+..++.+| ..||++.+ ++++|+++|+... .
T Consensus 82 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~ 153 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 153 (302)
T ss_dssp CEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCS
T ss_pred ceEEeecccccccccccccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccccc
Confidence 9999999999865433222333344444444 34666654 3799999998310 0
Q ss_pred ----CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeee
Q 013955 258 ----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR 333 (433)
Q Consensus 258 ----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~ 333 (433)
....+|++||+++|+++ +.+|+||+.|||+++... .+.....+..|.+||++++|+++||||+|.|+|..+
T Consensus 154 ~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~--~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~ 228 (302)
T d1utea_ 154 PRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAE--HGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQD 228 (302)
T ss_dssp CSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSS--SCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEEC
T ss_pred cccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCC--CCCchhhhhhhhHHHHhcCceEEEeCCCcceEEEec
Confidence 01378999999999987 557999999999987653 234456789999999999999999999999999874
Q ss_pred ccCCccCCCccEEEEECCCCCCCcccccCCCC---CCCcc-eeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEE
Q 013955 334 VNNGKPDPCGAVYITIGDGGNKEGLARKYKNP---QPDWS-VFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLW 409 (433)
Q Consensus 334 ~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~---~p~~~-~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~ 409 (433)
++++.|+++|+||............ .+.+. ......+||.+++| +.+.++++|++. +|+ ++|+++
T Consensus 229 -------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~~-~G~--~~~~~~ 297 (302)
T d1utea_ 229 -------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SGK--SLFKTK 297 (302)
T ss_dssp -------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TSC--EEEEEE
T ss_pred -------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-ECCEEEEEEEeC-CCC--EEEEEE
Confidence 5689999999998764322111111 11111 11234789999998 456899999974 676 999999
Q ss_pred EEeC
Q 013955 410 ITSL 413 (433)
Q Consensus 410 i~~~ 413 (433)
|.++
T Consensus 298 ~~~~ 301 (302)
T d1utea_ 298 LPRR 301 (302)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9876
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=1.4e-23 Score=194.24 Aligned_cols=229 Identities=17% Similarity=0.175 Sum_probs=143.2
Q ss_pred CCeEEEEEecCCCCCC-------------hHHHHHHhh--cCCCceEEccccccccccchhhHHHhhhhhhhhhh--CCC
Q 013955 135 FPITFAVAGDLGQTGW-------------TKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARP 197 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------~~~~l~~i~--~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP 197 (433)
..+||++++|+|.... .+++++.+. ..+|||||++||+++.+.. .+++.+.+.++++.. .+|
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~-~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP-AAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCH-HHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCh-hHHHHHHHHhhhhhhhcCCC
Confidence 4799999999986432 133455554 4589999999999986553 566667666665542 489
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhhc
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSK 273 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~~ 273 (433)
++.++||||.. ..+..+.... .......+|.+..++++|++|||.... ....+|++||++.|++
T Consensus 82 ~~~v~GNHD~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl~~~L~~ 149 (256)
T d2hy1a1 82 LVWVMGNHDDR------AELRKFLLDE------APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT 149 (256)
T ss_dssp EEECCCTTSCH------HHHHHHTTCC------CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHHHHHHTS
T ss_pred EEEEcccccch------hhhhhhhccc------cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHHHHHHHh
Confidence 99999999952 1222211111 111234678899999999999986432 2347899999999998
Q ss_pred cccCCCCeEEEEecccccCCCCCC-CCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCC
Q 013955 274 VDRKKTPWLLVLLHVPWYNSNEAH-QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDG 352 (433)
Q Consensus 274 ~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~g 352 (433)
... +.+||++|||++...... ........+.+.+++++++|+++||||+|...... -+|+.|+++|+.
T Consensus 150 ~~~---~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 150 PAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASAT 218 (256)
T ss_dssp CCT---TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCCC
T ss_pred hhc---cCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--------ECCEEEEEcCCc
Confidence 643 348899999987654321 01111235788999999999999999999765443 247778876653
Q ss_pred CCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEE
Q 013955 353 GNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWS 393 (433)
Q Consensus 353 G~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~ 393 (433)
.... .+. ..+.-........||..+++..++ +..+
T Consensus 219 ~~~~----~~~-~~~~~~~~~~~~~g~~lv~v~~d~-~~~~ 253 (256)
T d2hy1a1 219 CYTQ----DLT-VAAGGTRGRDGAQGCNLVHVYPDT-VVHS 253 (256)
T ss_dssp C------------------------CEEEEEECSSC-EEEE
T ss_pred cccc----ccc-CCCCCcccccCCCCEEEEEEECCC-EEEE
Confidence 2211 111 111111223346789999986543 4333
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.88 E-value=2.5e-22 Score=187.50 Aligned_cols=235 Identities=14% Similarity=0.136 Sum_probs=145.9
Q ss_pred eEEEEEecCCCCCC-------------hHHHHHHhh--cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceec
Q 013955 137 ITFAVAGDLGQTGW-------------TKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~l~~i~--~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v 201 (433)
++|+.++|+|.... .+++++.++ ..+||+||++||+++.+.. ..|+.+.+.++.+ .+|++.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~-~~y~~~~~~l~~l--~~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP-EEYQVARQILGSL--NYPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH-HHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcc-hhHHHHHHHHhcc--CCCEEEE
Confidence 58999999996432 123455554 4689999999999986543 4566666666554 4899999
Q ss_pred cCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhhccccC
Q 013955 202 QGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 202 ~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 277 (433)
+||||... .+..+...+. +. .........|.++.+++++++||+.... ....+|++||+++|++...
T Consensus 78 ~GNHD~~~------~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L~~~~~- 148 (271)
T d3d03a1 78 PGNHDDKA------LFLEYLQPLC-PQ-LGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGD- 148 (271)
T ss_dssp CCTTSCHH------HHHHHHGGGS-GG-GCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTT-
T ss_pred ecCccchH------HHHHHhhhhh-hc-cccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHHhhhcc-
Confidence 99999742 1111111110 00 0011124567788889999999996432 2358999999999998642
Q ss_pred CCCeEEEEecccccCCCCCCCC-CChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
+++||++|||++........ ......+.|.++++++ +|+++|+||.|...... -+|+.++++.+.+..
T Consensus 149 --~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------~~g~~~~~~pst~~~ 218 (271)
T d3d03a1 149 --KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------YRQALISTLPGTVHQ 218 (271)
T ss_dssp --SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--------ETTEEEEECCCSSCB
T ss_pred --ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE--------ECCEEEEEcCCceee
Confidence 34788889988765543211 1112357899999998 69999999999876554 247776655443221
Q ss_pred CcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCC
Q 013955 356 EGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDD 399 (433)
Q Consensus 356 ~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~ 399 (433)
. .+... ..-..+.....||......+ ..+....+...+
T Consensus 219 ~----~~~~~-~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~ 256 (271)
T d3d03a1 219 V----PYCHA-DTDPYYDLSPASCLMHRQVG-EQWVSYQHSLAH 256 (271)
T ss_dssp C----CCCSS-CCSCEEBCCCCEEEEEEEET-TEEEEEEEECSC
T ss_pred c----ccCCC-CCCcccccCCCEEEEEEEeC-CCEEEEEEecCC
Confidence 1 11111 11123433455777776654 445555555433
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.87 E-value=8.7e-22 Score=185.45 Aligned_cols=232 Identities=16% Similarity=0.117 Sum_probs=143.1
Q ss_pred eEEEEEecCCCCCC--------------------hHHHHHHhhcCCCceEEccccccccccch--hhHHHhhhhhhhhhh
Q 013955 137 ITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLAS 194 (433)
Q Consensus 137 ~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~~--~~w~~~~~~~~~l~~ 194 (433)
|||++++|+|.+.. .+++++.+++.+|||||++||+++..... .....+.+..+.+..
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 83 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 89999999986421 12345566688999999999999754321 111223333333332
Q ss_pred -CCCceeccCCCcCCCCCcccccccccc--ccc--ccCCCCCCCCCCceEEEEeCeEEEEEEcccCC-------------
Q 013955 195 -ARPWMVTQGNHEKESIPLIMDAFQSYN--ARW--KMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------- 256 (433)
Q Consensus 195 -~iP~~~v~GNHD~~~~~~~~~~~~~y~--~~~--~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------- 256 (433)
.+|++.++||||............... .++ ..............+....++++|+.+|+...
T Consensus 84 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (320)
T d2nxfa1 84 CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 163 (320)
T ss_dssp TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHH
T ss_pred cCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccccccc
Confidence 499999999999853211000000000 000 00000111122445667789999999986310
Q ss_pred ---------------------------------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChh
Q 013955 257 ---------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG 303 (433)
Q Consensus 257 ---------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~ 303 (433)
...+.+|++||+++|++++++ ..++|+++|+|++......... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~-~~~viv~~H~p~~~~~~~~~~~-~~ 241 (320)
T d2nxfa1 164 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPVHPCAADPICL-AW 241 (320)
T ss_dssp HHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCCCTTSSCGGGS-CT
T ss_pred cccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhc-CCceEEEECCCCccCCCCCccc-hh
Confidence 012588999999999987653 3468999999987655432111 12
Q ss_pred HHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEE
Q 013955 304 MMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGEL 382 (433)
Q Consensus 304 ~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l 382 (433)
..+++.++|.++ +|+++|+||+|..++... .+|+.|+++|+... .. ....+|..+
T Consensus 242 ~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~-------~~g~~~i~~~~~~~-------~~----------~~~~~~~~~ 297 (320)
T d2nxfa1 242 NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVIE-------TP----------PHSHAFATA 297 (320)
T ss_dssp THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGGG-------CC----------TTSCEEEEE
T ss_pred hHHHHHHHHHhCCCeeEEEeCCcCCcCeeec-------cCCCEEEECCeeec-------CC----------CCCCCEEEE
Confidence 457789999999 599999999999876542 46888998764311 11 113578889
Q ss_pred EEEcCceEEEEEE
Q 013955 383 KIVNSTHAFWSWH 395 (433)
Q Consensus 383 ~v~~~~~l~~~~~ 395 (433)
+|..+ .+.++-+
T Consensus 298 ~v~~d-~~~~~~~ 309 (320)
T d2nxfa1 298 YLYED-RMVMKGR 309 (320)
T ss_dssp EECSS-EEEEEEE
T ss_pred EEECC-EEEEEEe
Confidence 98654 5766543
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.83 E-value=1.7e-20 Score=149.90 Aligned_cols=95 Identities=39% Similarity=0.666 Sum_probs=82.0
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+..++|+||||++++ .++|+|+|+|.+....+.|+||.+++.+...+.+....+.......+++|+|+|+||+|+|.|
T Consensus 14 ~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y 93 (112)
T d2qfra1 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (112)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence 346789999999987 589999999987778899999999888888888876665544446789999999999999999
Q ss_pred EEEeccc--CCeeEEECCC
Q 013955 116 FYRCGRQ--GPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~~--s~~~~F~T~p 132 (433)
+|||++. |++++|+|+|
T Consensus 94 ~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 94 YYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEEECCSSSCEEEEEECCC
T ss_pred EEEECCCCceeeEEEEcCC
Confidence 9999974 8899999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.81 E-value=1.7e-19 Score=145.62 Aligned_cols=94 Identities=35% Similarity=0.537 Sum_probs=79.7
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 39 PSSHPQQVHISLAG--DSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 39 ~~~~p~qv~l~~~~--~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
....|+||||++++ .++|+|+|+|... ...+.|+||..++.+...+.+.+..+.......+++|+|+|+||+|||+|
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y 100 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY 100 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence 34689999999987 6899999999643 45679999999988888888877666554456789999999999999999
Q ss_pred EEEecc--cCCeeEEECCC
Q 013955 116 FYRCGR--QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--~s~~~~F~T~p 132 (433)
+|||++ +|++|+|||+|
T Consensus 101 ~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 101 YYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEECCGGGCEEEEEECCC
T ss_pred EEEECCCCccceEEEeCCC
Confidence 999997 48899999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=3.4e-17 Score=147.08 Aligned_cols=177 Identities=12% Similarity=-0.003 Sum_probs=112.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
+-+++++||+|.... .+++++.+.+.++|+||++||+++.+....++..+.+.+..+ .+|+++++||||........
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~i~GNHD~~~~~~~~ 82 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIWEYLR 82 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHHHHHH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEEEecCCCchhhhhhh
Confidence 457889999986532 345566667889999999999997665544555554444433 48999999999974211100
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCC----------CCCChHHHHHHHHHhhccccCCCCeEEE
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD----------YDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~----------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (433)
.. +......+. .......+.+..+++.++.++.... ......|..|+++.++.... ...|+
T Consensus 83 ~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~il 153 (228)
T d1uf3a_ 83 EA---ANVELVHPE---MRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD---YPKIF 153 (228)
T ss_dssp HH---HHHHHHCTT---EEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---CCEEE
T ss_pred hh---ccccccccc---ccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhccC---CceEE
Confidence 00 000000000 0001223556677888888765321 11246788999988877632 34799
Q ss_pred EecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccc
Q 013955 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (433)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 328 (433)
++|+|++....... ....+.+++++++++++++||+|..
T Consensus 154 ~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 154 LFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp EESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred EEeeeccCcccccc-----ccHHHHHHHHhcCCcEEEEcccccc
Confidence 99999876543221 2256778899999999999999974
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.69 E-value=4.5e-17 Score=148.76 Aligned_cols=185 Identities=10% Similarity=0.087 Sum_probs=109.3
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHH-----------------------hhhhhhh
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT-----------------------FGELVQP 191 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~-----------------------~~~~~~~ 191 (433)
+.|+++++|+|.... ..++++.+.+.+||+||++||+++.......|.. +...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~ 81 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 81 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHH
Confidence 579999999996543 3456667778999999999999987654333321 1222333
Q ss_pred hhh-CCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-------C--CCh
Q 013955 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------D--EYS 261 (433)
Q Consensus 192 l~~-~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-------~--~~~ 261 (433)
+.. .+|++.++||||...... ....+......+. .......+.+..+++.|+.+++.... . ...
T Consensus 82 L~~~~~pv~~i~GNHD~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 82 IGELGVKTFVVPGKNDAPLKIF---LRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHTTCSEEEEECCTTSCCHHHH---HHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHhcCCcEEEEeCCCcchhhHH---HHHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 433 489999999999742111 1111111110010 00012333445567788777653211 0 113
Q ss_pred HHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCC--ChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.+..|++..++.. +...+|+++|+|++.+....... .......+.+++++++++++++||.|...
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~ 222 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH 222 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCe
Confidence 3344555555443 33458999999987654322111 11234678899999999999999999743
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.40 E-value=1.4e-11 Score=106.42 Aligned_cols=178 Identities=17% Similarity=0.154 Sum_probs=109.8
Q ss_pred eEEEEEecCCCCCCh---HHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 137 ITFAVAGDLGQTGWT---KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~---~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
++++++||+|.+... .+.+.+ ++..++|.|+++||++.. +. .+.++.+. .|++.|.||||...
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~----e~----l~~l~~~~--~~v~~V~GN~D~~~--- 67 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK----ES----YDYLKTLA--GDVHIVRGDFDENL--- 67 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH----HH----HHHHHHHC--SEEEECCCTTCCCT---
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch----hh----HHHHHhhC--CceEEEeCCcCccc---
Confidence 589999999964322 233333 456689999999999741 11 22233332 57889999999732
Q ss_pred ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccC
Q 013955 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (433)
Q Consensus 213 ~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (433)
..|. .-.+.+++ ++|.+.|.+.+.
T Consensus 68 ------------~~p~---------~~~~~~~g-----------------------------------~~i~~~Hg~~~~ 91 (182)
T d1z2wa1 68 ------------NYPE---------QKVVTVGQ-----------------------------------FKIGLIHGHQVI 91 (182)
T ss_dssp ------------TSCS---------EEEEEETT-----------------------------------EEEEEECSCCCC
T ss_pred ------------ccce---------EEEEEEcC-----------------------------------cEEEEEeCCCCC
Confidence 1221 11111111 356777765443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCccee
Q 013955 293 SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVF 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~ 372 (433)
... ..+.+..++++.++|++++||+|...... -+|+++|..|+.|.+.+. .-.++
T Consensus 92 ~~~--------~~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPGSv~~pr~~--~~~~~------- 146 (182)
T d1z2wa1 92 PWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYNA--LETNI------- 146 (182)
T ss_dssp BTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCCS--SCSCC-------
T ss_pred CCC--------CHHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCCCCCCCCCC--CCCCC-------
Confidence 221 12466777788899999999999864432 258889999987765321 00111
Q ss_pred EeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEEeC
Q 013955 373 REASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITSL 413 (433)
Q Consensus 373 ~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~~~ 413 (433)
...|+++++.+ ..+++.+++.+.++ ..++.++..|.
T Consensus 147 ---~~syaild~~~-~~v~~~~~~l~~~~-v~~~~~~~~~~ 182 (182)
T d1z2wa1 147 ---IPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKKS 182 (182)
T ss_dssp ---CCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEECC
T ss_pred ---CCEEEEEEEeC-CEEEEEEEEecCCc-EEEEEEEEEcC
Confidence 23578999855 56777777765554 45788887763
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.37 E-value=4.2e-11 Score=104.49 Aligned_cols=175 Identities=13% Similarity=0.159 Sum_probs=105.2
Q ss_pred EEEEEecCCCCCCh----HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 138 TFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 138 ~f~~~gD~~~~~~~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
-++++||+|..... ..+.+.+...++|.|+++||++.. . ..+.++.+. .+++.|.||||......
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~----~----~l~~l~~l~--~~v~~V~GN~D~~~~~~- 73 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ----E----YVEMLKNIT--KNVYIVSGDLDSAIFNP- 73 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH----H----HHHHHHHHC--SCEEECCCTTCCSCCBC-
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH----H----HHHHHHhhC--CCEEEEcCCCCcchhhh-
Confidence 37899999964322 234444567899999999999742 1 122233332 46889999999853211
Q ss_pred cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCC
Q 013955 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (433)
Q Consensus 214 ~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (433)
-..+.. .+| ..-.+.+++ ++|.+.|...+..
T Consensus 74 ---~~~~~~--~lp---------~~~~~~~~~-----------------------------------~~i~l~H~~~~~~ 104 (193)
T d2a22a1 74 ---DPESNG--VFP---------EYVVVQIGE-----------------------------------FKIGLMHGNQVLP 104 (193)
T ss_dssp ---CGGGTB--CCC---------SEEEEEETT-----------------------------------EEEEEECSTTSSS
T ss_pred ---hHHHHh--hCC---------ccEEEEECC-----------------------------------EEEEEEeccCCCC
Confidence 011111 112 122233332 3556666443322
Q ss_pred CCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeE
Q 013955 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFR 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 373 (433)
.. ..+.+..++.+.++|++++||+|...... -+|+++|..|+.|.+... ..+
T Consensus 105 ~~--------~~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGSvg~pr~~----~~~-------- 156 (193)
T d2a22a1 105 WD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFSA----LTP-------- 156 (193)
T ss_dssp TT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCCT----TST--------
T ss_pred CC--------CHHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCCCCcCcCC----CCC--------
Confidence 11 12567777888899999999999864433 258888999988765311 111
Q ss_pred eccccEEEEEEEcCceEEEEEEEeCCCC
Q 013955 374 EASFGHGELKIVNSTHAFWSWHRNDDDE 401 (433)
Q Consensus 374 ~~~~G~~~l~v~~~~~l~~~~~~~~~g~ 401 (433)
.....|+.+++.+ ..+++++++..+++
T Consensus 157 ~~~~syaild~~~-~~v~v~~y~l~~~~ 183 (193)
T d2a22a1 157 DAPPSFMLMALQG-NKVVLYVYDLRDGK 183 (193)
T ss_dssp TCCCEEEEEEEET-TEEEEEEEEEETTE
T ss_pred CCCCEEEEEEEEC-CEEEEEEEEecCCe
Confidence 1124788999854 56888888876665
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.19 E-value=7e-12 Score=118.13 Aligned_cols=73 Identities=23% Similarity=0.227 Sum_probs=51.2
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhhh-CCCcee
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~~-~iP~~~ 200 (433)
+||++++|+|.+... ..+++.+.+.++|+||++||+++.... ......+.+.+..+.. .+|++.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 589999999975431 123344457899999999999975433 2233344555666654 499999
Q ss_pred ccCCCcCCC
Q 013955 201 TQGNHEKES 209 (433)
Q Consensus 201 v~GNHD~~~ 209 (433)
++||||...
T Consensus 81 i~GNHD~~~ 89 (333)
T d1ii7a_ 81 IEGNHDRTQ 89 (333)
T ss_dssp ECCTTTCCS
T ss_pred eCCCCcccc
Confidence 999999853
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.17 E-value=1.3e-09 Score=93.13 Aligned_cols=159 Identities=15% Similarity=0.120 Sum_probs=100.1
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
..|++++||+|.+.. .+++++.+ ..++|.|+++||+.+..... + ..|+..|.||||...
T Consensus 3 ~~kI~viSD~Hgn~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~------------~--~~~~~~V~GN~D~~~----- 62 (173)
T d3ck2a1 3 KQTIIVMSDSHGDSLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP------------L--WEGIRVVKGNMDFYA----- 62 (173)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG------------G--GTTEEECCCTTCCST-----
T ss_pred CCEEEEEeccCCCHHHHHHHHHHh-hcCCCEEEECCcccCcccch------------h--hcCCeEEecCccccc-----
Confidence 579999999985421 12333333 45799999999987643210 1 147788999999741
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
..|. ...+++++ .+|++.|...+...
T Consensus 63 ----------~~~~---------~~~~~~~~-----------------------------------~~~~~~Hg~~~~~~ 88 (173)
T d3ck2a1 63 ----------GYPE---------RLVTELGS-----------------------------------TKIIQTHGHLFDIN 88 (173)
T ss_dssp ----------TCCS---------EEEEEETT-----------------------------------EEEEEECSGGGTTT
T ss_pred ----------ccce---------EEEEEECC-----------------------------------EEEEEEeCcCCCCC
Confidence 1111 11122221 35666675554432
Q ss_pred CCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEe
Q 013955 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFRE 374 (433)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~ 374 (433)
.. .+.+..++.+.++|++++||+|...... -++++++..|+-|.+.+ ..+
T Consensus 89 ~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~pr~-----~~~--------- 138 (173)
T d3ck2a1 89 FN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPRG-----TIR--------- 138 (173)
T ss_dssp TC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCCT-----TCC---------
T ss_pred CC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCCCC-----CCC---------
Confidence 21 1456677788899999999999865443 25889999999886521 111
Q ss_pred ccccEEEEEEEcCceEEEEEEEeCCCC
Q 013955 375 ASFGHGELKIVNSTHAFWSWHRNDDDE 401 (433)
Q Consensus 375 ~~~G~~~l~v~~~~~l~~~~~~~~~g~ 401 (433)
...|+.+++.+ ..++++|++. +++
T Consensus 139 -~~syail~~~~-~~~~v~~~~~-d~~ 162 (173)
T d3ck2a1 139 -ECLYARVEIDD-SYFKVDFLTR-DHE 162 (173)
T ss_dssp -SCCEEEEEECS-SEEEEEEECT-TSC
T ss_pred -CCEEEEEEEeC-CEEEEEEEEe-CCe
Confidence 23578888754 5688999874 454
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.14 E-value=5e-11 Score=107.66 Aligned_cols=189 Identities=10% Similarity=0.005 Sum_probs=96.5
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-----cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~-----~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
++++++||+|.... .+++++.+. ..++|.+|++||+++.+... ....+.+..+....+++.++||||....
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~---~evi~~l~~l~~~~~v~~v~GNHD~~~~ 77 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVKIIRGKYDQIIA 77 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCc---HHHHHHHHHHhhcCCEEEEeccHHHHHH
Confidence 48999999984321 245555553 24679999999999865421 2334455555545688999999996310
Q ss_pred Ccccccc-cccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEeccc
Q 013955 211 PLIMDAF-QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVP 289 (433)
Q Consensus 211 ~~~~~~~-~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 289 (433)
....... ......+.... .... .++ ........+++.||++...........-.+++.|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~----------------~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~ 139 (251)
T d1nnwa_ 78 MSDPHATDPGYIDKLELPG----------------HVKK-ALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGS 139 (251)
T ss_dssp HSCTTCSSSGGGGGSSCCH----------------HHHH-HHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSC
T ss_pred hccccccccchhhhhccch----------------hHHH-hhH-HHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecC
Confidence 0000000 00000000000 0000 000 000001245566665443322111111267888887
Q ss_pred ccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 290 WYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
+........... .....+...+... +++++++||+|...... -++..++..|+-|.+
T Consensus 140 p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~in~Gsvg~~ 197 (251)
T d1nnwa_ 140 PINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFP 197 (251)
T ss_dssp SSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSC
T ss_pred ccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeecccccccccc
Confidence 765443221111 1123333344443 68999999999754332 247788999998764
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.12 E-value=2.3e-10 Score=97.06 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=85.2
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccc
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~ 215 (433)
+|++++||+|.+.. .+++++.+++.++|.|+++||++... .++. +.. ...|++.+.||||...... ..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~~----~~~~----l~~--~~~~~~~v~GN~D~~~~~~-~~ 69 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLF----VIKE----FEN--LNANIIATYGNNDGERCKL-KE 69 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCSTH----HHHH----GGG--CSSEEEEECCTTCCCHHHH-HH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCHH----HHHH----Hhh--cCccEEEEcccccccchhh-hH
Confidence 58999999986522 35567777888999999999998521 1211 111 1378999999999742100 00
Q ss_pred cccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC
Q 013955 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (433)
Q Consensus 216 ~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (433)
..........+| ....+.++ ...|++.|.+++
T Consensus 70 ~~~~~~~~~~~~---------~~~~~~~~-----------------------------------~~~i~l~Hg~~~---- 101 (165)
T d1s3la_ 70 WLKDINEENIID---------DFISVEID-----------------------------------DLKFFITHGHHQ---- 101 (165)
T ss_dssp HHHHHCTTCEEE---------SEEEEEET-----------------------------------TEEEEEEESCCH----
T ss_pred hhhhhcccccCC---------hhhceEEC-----------------------------------CcEEEEEECCcc----
Confidence 000000000001 11111111 136788887532
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
..+..++...++|++++||+|...... -++++++..|+-|.+
T Consensus 102 ----------~~~~~~~~~~~~d~v~~GHtH~~~~~~--------~~~~~~iNPGSvg~p 143 (165)
T d1s3la_ 102 ----------SVLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCGY 143 (165)
T ss_dssp ----------HHHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSCT
T ss_pred ----------cHHHHHhhcCCCCEEEECCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 235566788899999999999853322 258889998987653
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=2.7e-08 Score=85.26 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=45.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchh-hHHH-hhhhhhhhhh-CCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDT-FGELVQPLAS-ARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~-~~~~~~~l~~-~iP~~~v~GNHD~~ 208 (433)
+|++++||+|.... .+++++.+.+.++|.+|++||++..+.... .... -...++.+.. ..|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCCcEEEecCCCCch
Confidence 68999999994422 245666667789999999999986543210 0000 0112222222 26899999999973
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.56 E-value=3e-07 Score=79.03 Aligned_cols=45 Identities=20% Similarity=0.345 Sum_probs=34.0
Q ss_pred EEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.|+++|.|+....... .......+.....+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 7999999986544321 12345677888999999999999999753
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.42 E-value=1.7e-06 Score=80.75 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=88.0
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHH---HHH-hhcCCCc-eEEccccccccccchhhHHHhhhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------TKST---LDH-IGQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLAS 194 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~---l~~-i~~~~pd-~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~ 194 (433)
-+.++|+...|+|..-. ..+. +++ .++.+++ ++|.+||++...........-.+.+-++..
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 46799999999985211 0112 222 2345677 556799999764431110000122233334
Q ss_pred CCCc-eeccCCCcCCCCCcccccccccccccccCCC--------CCC---CCCCceEEEEeC--eEEEEEEcccCCCC--
Q 013955 195 ARPW-MVTQGNHEKESIPLIMDAFQSYNARWKMPFE--------ESG---SNSNLYYSFDVA--GAHLIMLGSYADYD-- 258 (433)
Q Consensus 195 ~iP~-~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~--------~~~---~~~~~~ys~~~g--~v~fi~lds~~~~~-- 258 (433)
.+++ ..++||||+...+.....+....+.+..|.- ..+ .....|..+..+ ++.++.+.......
T Consensus 89 ~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~~~~~~~ 168 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRF 168 (322)
T ss_dssp TSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCC
T ss_pred ccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeeccccccC
Confidence 4554 6689999995432110111111112222210 001 112345556654 57788776532221
Q ss_pred -C-----C---hHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-C-CcEEEecCccc
Q 013955 259 -E-----Y---SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-S-VDLVLAGHVHA 327 (433)
Q Consensus 259 -~-----~---~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~-VdlvlsGH~H~ 327 (433)
. . ..+..|+++.++ .+.+.+|+++|.++-... .........+-+.. + ++++|.||+|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~-------~~~~~~~~~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 169 NSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-------GEFYQVHQYLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp CTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-------CHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred CCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc-------cccchHHHHHHHhCCCCCEEEecccccc
Confidence 1 0 112234444433 256779999998753221 11112222222333 3 44689999996
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=7.7e-07 Score=83.64 Aligned_cols=184 Identities=18% Similarity=0.189 Sum_probs=90.6
Q ss_pred CeEEEEEecCCCCCC-----------hHHHHHHh----hcCCCc-eEEccccccccccchh--hHHHhhhhhhhhhhCCC
Q 013955 136 PITFAVAGDLGQTGW-----------TKSTLDHI----GQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARP 197 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-----------~~~~l~~i----~~~~pd-~vl~~GD~~~~~~~~~--~w~~~~~~~~~l~~~iP 197 (433)
.++++.++|+|..-. ....++++ +..+++ ++|.+||++....... ......+.+..+. .
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g--~- 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--Y- 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT--C-
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcC--C-
Confidence 578899999984211 11233333 335666 5566999986433211 1122223333332 2
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCC---C----CCC-CCCCceEEEEeCeEEE--EEEcccCC-------C---
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAGAHL--IMLGSYAD-------Y--- 257 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~-~~~~~~ys~~~g~v~f--i~lds~~~-------~--- 257 (433)
=..++||||+..... .+..+......|. | ..+ ..-..|.-++.+++++ |.+-+... .
T Consensus 85 Da~~~GNHEfd~G~~---~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~ 161 (337)
T d1usha2 85 DAMAIGNHEFDNPLT---VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTD 161 (337)
T ss_dssp CEEECCGGGGSSCHH---HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTT
T ss_pred eEEEechhhhccchH---HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcccccC
Confidence 245789999954321 1222222222221 0 001 1124455677888654 55543210 0
Q ss_pred ---CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 258 ---DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 258 ---~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
....+..+...+.|++.+ +.+.+|+++|.+........... .....+...+...+||+++.||.|...
T Consensus 162 ~~~~d~~~~~~~~~~~l~~~~--~~D~iI~lsH~G~~~d~~~~~~~--~~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 162 IEFRKPADEAKLVIQELQQTE--KPDIIIAATHMGHYDNGEHGSNA--PGDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp EEECCHHHHHHHHHHHHHHHT--CCSEEEEEEESCCCGGGCCTTSC--CCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cccccHHHHHHHHHHHHhhcc--CCCEEEEecccCccccccccccc--chhHHHHHhCcccCceEEecCccCccc
Confidence 011233333334444322 46689999999865433211111 111344444445689999999999753
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.90 E-value=6.1e-05 Score=69.11 Aligned_cols=171 Identities=16% Similarity=0.134 Sum_probs=85.6
Q ss_pred CeEEEEEecCCCCCC------------------hHHHHHHhhcCCC-ceEEccccccccccchhhH--HHhhhhhhhhhh
Q 013955 136 PITFAVAGDLGQTGW------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRW--DTFGELVQPLAS 194 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~------------------~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w--~~~~~~~~~l~~ 194 (433)
.++|+..+|+|..-. ....++++++.++ -++|-+||++......... ....+.+..+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n~~-- 79 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL-- 79 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT--
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHHhc--
Confidence 367889999974311 1234555554444 4778899998754421111 1112222222
Q ss_pred CCCceeccCCCcCCCCCcccccccccccccccCC---C----CC---CCCCCceEEEEeCeEEEEEEc--ccC-------
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ES---GSNSNLYYSFDVAGAHLIMLG--SYA------- 255 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~---~~~~~~~ys~~~g~v~fi~ld--s~~------- 255 (433)
-.=..++||||+..... .+..+......|. | .. ...-..|..++.+++++-++. +..
T Consensus 80 -gyDa~~~GNHEfd~G~~---~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~~ 155 (302)
T d2z1aa2 80 -RYRAMALGNHEFDLGPG---PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNP 155 (302)
T ss_dssp -TCCEEECCGGGGTTCHH---HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCC
T ss_pred -ccccccccchhhhcChh---HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEecccccccccccc
Confidence 23356899999964321 1111111111111 0 00 011234566778886654443 310
Q ss_pred --C--CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCccccee
Q 013955 256 --D--YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYER 330 (433)
Q Consensus 256 --~--~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r 330 (433)
. +....+..++..+.|++ ++.+-+|++.|.... .=..+.++. ++|+++.||.|....
T Consensus 156 ~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~---------------~d~~la~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 156 GPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG---------------EDLKLARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp CTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH---------------HHHHHHTTCSSCCEEEECSSCCCBS
T ss_pred cCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc---------------hhhHHHhcCCCeeeeecCccceeec
Confidence 0 11123334444444443 245679999998631 112233333 699999999997543
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.71 E-value=0.00032 Score=51.43 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=50.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.++++|.|...... ....|+|....+......... ...+....+.|+||+|++.|.++|
T Consensus 2 daP~~l~v~~~~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~V 73 (92)
T d1tdqa2 2 DAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVGI 73 (92)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEEE
Confidence 46889999888899999999876433 344677876543322111111 123456678999999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 74 ~a 75 (92)
T d1tdqa2 74 SA 75 (92)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.56 E-value=0.00014 Score=53.93 Aligned_cols=81 Identities=19% Similarity=0.289 Sum_probs=48.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----Cc-EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PS-VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~-~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.|..+.+.-.+.++++|.|.-..... .. .++|.............. .. .....|+||+|++.|.
T Consensus 3 ~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~ 71 (96)
T d1x5xa1 3 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYK 71 (96)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEE
T ss_pred cCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec---------CC--CCEEEECCCCCCCEEE
Confidence 56667777778999999998643222 11 333433322211111110 11 1235788999999999
Q ss_pred EEecc--------cCCeeEEECCCC
Q 013955 117 YRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p~ 133 (433)
|||.. .|+...|+|.|+
T Consensus 72 ~rV~A~n~~G~s~~S~~~~~~T~pd 96 (96)
T d1x5xa1 72 FKVIAYNSEGKSNPSEVVEFTTCPD 96 (96)
T ss_dssp EEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEcCCcEeCCCCCEEEEeCcC
Confidence 99964 256778888773
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.0005 Score=52.19 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=54.1
Q ss_pred CCCCCCCCceEEEEec--CCCcEEEEEEcCCCCCC----cEEEEeccCCCCCee-EEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 36 DPKPSSHPQQVHISLA--GDSHMRVTWITDDESSP----SVVEYGTSPGGYNCG-AEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
+..|...|..+.+... +.+++.|.|.-+..... ..+.|.......... ... ...+......|++
T Consensus 8 ~~~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~ 78 (111)
T d1x5ka1 8 ELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE---------PVVGNRLTHQIQE 78 (111)
T ss_dssp CCCCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEE---------EESTTCSEEEECS
T ss_pred CCCCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEE---------EeCCCeeEEEECC
Confidence 3456677888887754 37799999986543322 244555443221110 000 1122334567899
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|+|++.|.+||.. .|+...|+|+.
T Consensus 79 L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 79 LTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp CCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 9999999999964 25677888865
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=0.0003 Score=52.86 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=52.8
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCe-eEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNC-GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
.|..+++...+++++.|+|....... .-.++|......... ... ........+.|+||+|+|.
T Consensus 5 pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 74 (104)
T d2b5ib2 5 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLL----------TLKQKQEWICLETLTPDTQ 74 (104)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCE----------EECSCCCEEEECSCCTTCE
T ss_pred CCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEE----------ecCCCcEEEEECCCCCCCE
Confidence 79999999999999999998764321 124555544332111 111 1122344568899999999
Q ss_pred EEEEecc------------cCCeeEEECCC
Q 013955 115 YFYRCGR------------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~------------~s~~~~F~T~p 132 (433)
|.+||.. +|+...|+|.|
T Consensus 75 Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 75 YEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 9999864 14557788866
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00058 Score=51.86 Aligned_cols=83 Identities=23% Similarity=0.271 Sum_probs=53.5
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+..|..+.+...+.++|+|.|.-+.... .-.|.|............ ........+.|++|+|++.
T Consensus 11 P~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~L~p~t~ 80 (107)
T d1x5fa1 11 PSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATV 80 (107)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCE
T ss_pred CcCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEE----------EeCCCccEEEecCCCCCCE
Confidence 3479999988888999999998642211 235666554332222111 1122345678999999999
Q ss_pred EEEEeccc--------CCeeEEECCC
Q 013955 115 YFYRCGRQ--------GPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~~--------s~~~~F~T~p 132 (433)
|.+||... |....++|.|
T Consensus 81 Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 81 YIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 99999652 4556677765
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.00015 Score=53.56 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=48.4
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
|..+.|...+.+++.|.|....... .-.|+|............+. ....+|++|+|++.|.||
T Consensus 4 P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~ 70 (93)
T d1x4xa1 4 CKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCR 70 (93)
T ss_dssp CCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEE
T ss_pred CCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEE
Confidence 3444455556889999998654322 23456665543322222111 123468899999999999
Q ss_pred ecc--------cCCeeEEECCCC
Q 013955 119 CGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p~ 133 (433)
|.. .|+...|+|+|+
T Consensus 71 V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 71 VQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEECCcCcCCCCcEEEEeCCC
Confidence 964 256778888873
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.43 E-value=0.00023 Score=52.76 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=48.5
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
++...|..+.+...+.+++.|.|..+.... .-.|+|............. ...+......|+||+|+
T Consensus 5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~ 75 (95)
T d2ibga1 5 DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---------IEGAHARSFKIAPLETA 75 (95)
T ss_dssp CCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---------EECTTCCEEEECSCCTT
T ss_pred CCCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeee---------ccCCceeEEEEeeccCC
Confidence 344568888777667899999998653222 1357787654432221111 11233456789999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
|.|.+||..
T Consensus 76 t~Y~~~V~A 84 (95)
T d2ibga1 76 TMYEFKLQS 84 (95)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999999964
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.43 E-value=0.00014 Score=54.15 Aligned_cols=81 Identities=17% Similarity=0.264 Sum_probs=50.8
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccC--CCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSP--GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
++..|..+++.-.++++++|+|..... .....++|...- ........ .. ...++|+||+|+|.|
T Consensus 2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~~~~~-----------~~--~t~~~i~~L~p~t~Y 68 (94)
T d1x5aa1 2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQM-----------VL--EPRVLLTKLQPDTTY 68 (94)
T ss_dssp CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCEEEEE-----------ES--SSEEEEESCCSSCEE
T ss_pred cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCceEEEe-----------ec--cCEEEECCCCCCCEE
Confidence 455777888887889999999986532 222233443321 11111100 01 124578999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.+||.. .|+...|+|.|
T Consensus 69 ~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 69 IVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 999964 26778899876
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=9.6e-05 Score=54.83 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=50.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCCcE----EEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+++.-.+.++++|.|.-+....... |+|.............. .....+.|++|+|++.|.+
T Consensus 3 ~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 71 (95)
T d2djsa1 3 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVV 71 (95)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEE
T ss_pred CCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEEE
Confidence 45567778778999999998765443333 33443332211111100 1123467899999999999
Q ss_pred Eecc--------cCCeeEEECCC
Q 013955 118 RCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p 132 (433)
||.. .|+...|+|.|
T Consensus 72 ~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 72 QVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEcCCCCCCCCCCEEEEeCC
Confidence 9964 25677888876
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00048 Score=50.24 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=48.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.++-.+.++++|.|.-.... ..-.|+|............ ..++....+.|++|+|++.|.++|
T Consensus 2 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----------~v~~~~~~~~i~~L~p~t~Y~~~V 71 (89)
T d1fnfa3 2 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVVSI 71 (89)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----------EEETTCCEEEEESCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----------EECCCccEEEECCCcccCEEEEEE
Confidence 46889999977899999999876433 3345788766543221110 012223456889999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 72 ~a 73 (89)
T d1fnfa3 72 VA 73 (89)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00065 Score=49.77 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=52.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+++++.|.|.-.... ..-.|+|............ ..+....+.|++|+|++.|.+||
T Consensus 3 ~aP~n~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 71 (92)
T d1qg3a1 3 GAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----------LDSKVPSVELTNLYPYCDYEMKV 71 (92)
T ss_dssp CCCEEEEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----------EEESSSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEE-----------ecCCccEEEECCCCCCcEEEEEE
Confidence 46888888888899999999876422 2346777665432211111 01122356789999999999999
Q ss_pred cc--------cCCeeEEECC
Q 013955 120 GR--------QGPEFEFKTP 131 (433)
Q Consensus 120 ~~--------~s~~~~F~T~ 131 (433)
.. .|+...++|+
T Consensus 72 ~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 72 CAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEECSSCBCCCCCCEEEECC
T ss_pred EEEeCCcCcCCCCCEEEEcC
Confidence 64 2455566664
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.0009 Score=48.81 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=48.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+++.-.+.++++|.|.-.... ..-.|+|....+....... ..++....+.|.||+||+.|.++|
T Consensus 3 d~P~~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (90)
T d1tena_ 3 DAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI----------DLTEDENQYSIGNLKPDTEYEVSL 72 (90)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE----------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE----------EecCCcceeeEeeecCCCEEEEEE
Confidence 46899999977899999999865433 3346777765433221110 012223457899999999999998
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~a 74 (90)
T d1tena_ 73 IS 74 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00037 Score=51.71 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCceEEEEecC--CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~--~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|.++.|+..+ ++++.|+|..+... ..-.|+|....+....... ..++-...+.|+||+||+.|.+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~----------~v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE----------EECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeeee----------ccCCCccEEEECCcccCcEEEE
Confidence 58888888665 58999999976421 2346778765433221110 1233445678999999999999
Q ss_pred Eeccc-----C--CeeEEECC
Q 013955 118 RCGRQ-----G--PEFEFKTP 131 (433)
Q Consensus 118 ~v~~~-----s--~~~~F~T~ 131 (433)
+|..- + ....|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 98641 1 24667764
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.27 E-value=0.00072 Score=50.48 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=53.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
|...|..+++.....++++|.|....... .-.|+|...++.......-. ...+......|++|+|+
T Consensus 1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHLQPE 72 (101)
T ss_dssp CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSCCTT
T ss_pred CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--------EEcCCeeEEEEcCCCCC
Confidence 34679999998888999999998643211 22466665543221111000 01122334568999999
Q ss_pred CEEEEEecc--------cCCeeEEECCC
Q 013955 113 TVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+.|.++|.. .|+...++|..
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 999999964 35667777753
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00045 Score=51.58 Aligned_cols=80 Identities=13% Similarity=0.197 Sum_probs=51.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.-.+.+++.|.|..+.... .-.|+|............- .+.....+|+||+|++.|.
T Consensus 5 ~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~ 73 (98)
T d1x5la1 5 SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTL-----------KAVTTRATVSGLKPGTRYV 73 (98)
T ss_dssp CCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEE-----------EESSSEEEECSCCTTCEEE
T ss_pred CCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEe-----------cCCceEEEECCCCCCCEEE
Confidence 367778777777999999998654332 2346776554322211110 1112356789999999999
Q ss_pred EEecc--------cCCeeEEECC
Q 013955 117 YRCGR--------QGPEFEFKTP 131 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~ 131 (433)
+||.. .|+...|+|.
T Consensus 74 ~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 74 FQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp ECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEcCCCCcCCCCCEEEEcC
Confidence 99964 3567778874
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00099 Score=50.28 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+.+|+..|..+.+...+.+++.|.|....... .-.|+|.............. . .........++|++|
T Consensus 5 ~~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~i~~L 78 (109)
T d1va9a1 5 EAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV----E--MKATGDSEVYTLDNL 78 (109)
T ss_dssp CCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC----B--CCCCSSEEEEEEESC
T ss_pred CCCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee----E--EecCCCeeEEEECCC
Confidence 34677789999998888999999999753221 12566665543221110000 0 012344667889999
Q ss_pred CCCCEEEEEecc
Q 013955 110 EHDTVYFYRCGR 121 (433)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (433)
+|++.|.++|..
T Consensus 79 ~p~t~Y~~~V~a 90 (109)
T d1va9a1 79 KKFAQYGVVVQA 90 (109)
T ss_dssp CSSCCEEEEEEE
T ss_pred CcceEEEEEEEE
Confidence 999999999964
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.22 E-value=0.0015 Score=47.91 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=48.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..+|..+.+...+.++++|.|.-+... ..-.|+|....+...... . ..+.....++|+||+|++.|.++
T Consensus 4 ~~~P~~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~------~----~~~~~~~~~~i~~L~p~t~Y~v~ 73 (93)
T d1tdqa1 4 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT------F----RLQPPLSQYSVQALRPGSRYEVS 73 (93)
T ss_dssp SCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE------E----EECTTCSEEEECSCCTTCEEEEE
T ss_pred CCcCCCCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeE------E----EeCCCceEEEEeCcccceEEEEE
Confidence 358999999988899999999865433 334667776543222111 0 11222345689999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~a 76 (93)
T d1tdqa1 74 ISA 76 (93)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00034 Score=54.50 Aligned_cols=92 Identities=17% Similarity=0.212 Sum_probs=56.4
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCC--C----CcEEEEeccCCCCC---eeEEeeeeEEeeeeeecCeEEEEEe
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDES--S----PSVVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~--~----~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
+.+++..|..|.+...+.++++|.|...... . ...++|........ ........ ...+...+++|
T Consensus 11 e~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i 84 (125)
T d1uena_ 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKIL------TFQGSKTHGML 84 (125)
T ss_dssp CCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEE------EEESSCSEEEE
T ss_pred CcCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEE------EeCCCccEEEE
Confidence 4567778999998877899999999754211 1 12334443322111 11111100 11223446889
Q ss_pred CCCCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 107 GPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.+|+|+|.|.+||.. .|+...|+|++.
T Consensus 85 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 85 PGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 999999999999964 256778999763
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.18 E-value=0.0015 Score=47.46 Aligned_cols=66 Identities=18% Similarity=0.352 Sum_probs=43.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
..|..+.+.-.+.++++|+|.-.. .......|....+. ..... .... ...++||+|++.|.|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~-~~~~~-----------~~~t--~~~~~~L~p~t~Y~~~V~ 69 (88)
T d1k85a_ 5 TAPTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGT-ALATT-----------VTGT--TATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESS-SEEEE-----------ESSS--EEEECCCCSSCEEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccc-eEEEe-----------cCCC--EEEECCCCCCCEEEEEEE
Confidence 479999888778999999997553 23345666554221 11111 1111 346899999999999997
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 70 A 70 (88)
T d1k85a_ 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.15 E-value=0.00085 Score=50.99 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=47.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+...|..+.+.-.+.++++|.|.-..... .-.|+|........+..... ..........|++|+|++
T Consensus 9 ~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~~L~p~t 80 (108)
T d1x4za1 9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--------AIPPSRLSVEITGLEKGI 80 (108)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--------EECTTCCEEEEESCCTTC
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--------eecCCccEEEECCCCCCC
Confidence 345578888888778999999995332211 23556665443323222111 112233456789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 81 ~Y~frV~A 88 (108)
T d1x4za1 81 SYKFRVRA 88 (108)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=97.11 E-value=0.0039 Score=54.00 Aligned_cols=188 Identities=19% Similarity=0.254 Sum_probs=103.5
Q ss_pred eEEEEEecCCCCCChH----HHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh-hCCCceeccCCCcCCCCC
Q 013955 137 ITFAVAGDLGQTGWTK----STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNHEKESIP 211 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNHD~~~~~ 211 (433)
+|++++||+ .+.... ..+..++ .+.||||..|.++-.+.- -..+.+ +.|. ..+-++ +.|||=+....
T Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~G~G-it~k~~----~~L~~~GVDvI-T~GNH~wdkke 72 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGLRAVGLHLPDIR-DRYDLVIANGENAARGKG-LDRRSY----RLLREAGVDLV-SLGNHAWDHKE 72 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHG-GGCSEEEEECTTTTTTSS-CCHHHH----HHHHHHTCCEE-ECCTTTTSCTT
T ss_pred CeEEEEecc-CCHHHHHHHHHHhHHHH-hhCCEEEEeeeccCCCcC-CCHHHH----HHHHHhCCCEE-EcCcccccchh
Confidence 589999998 322222 3344444 458999999999754321 111111 2222 235554 89999885432
Q ss_pred cccccccccccccccCCCC-CCCCCCceEEEEeCeEEEEEEccc--CCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 212 LIMDAFQSYNARWKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 212 ~~~~~~~~y~~~~~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
.. .+... .+.-.|.|- .+.++..|+.++.++.++.++|-. ......+.-.+-+++.|++. +.+.+||=+|.
T Consensus 73 i~--~~i~~-~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~~---~~~~i~VDfHa 146 (252)
T d2z06a1 73 VY--ALLES-EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEE---KADYVLVEVHA 146 (252)
T ss_dssp HH--HHHHH-SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHC---CCSEEEEEEEC
T ss_pred hh--hhhcc-ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhhc---CccEEEEEccc
Confidence 11 11111 123334432 234456788888888777776642 11111122223334444433 45668888886
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGNK 355 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~~ 355 (433)
=..+ . +.-.-.+-+.+|.+|+-=|+|....-..+. |+|+.|++ .|.-|..
T Consensus 147 EaTS-----------E-K~A~g~~ldGrvsavvGTHTHV~TaD~rIL-----p~GTayiTDvGM~G~~ 197 (252)
T d2z06a1 147 EATS-----------E-KMALAHYLDGRASAVLGTHTHVPTLDATRL-----PKGTLYQTDVGMTGTY 197 (252)
T ss_dssp SCHH-----------H-HHHHHHHHBTTBSEEEEESSCSCBSCCEEC-----TTSCEEESCCCCBEES
T ss_pred chhh-----------h-heeeeEecCCCEEEEEecCccccccccEEe-----cCCeEEEccCccccch
Confidence 3211 1 233344566689999999999864333332 68999987 4555554
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00086 Score=50.22 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=51.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+++...+.+++.|.|...... ..-.|+|....+.. .... ..+......|+||+||+.|.++|
T Consensus 2 ~~P~~l~~~~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~-~~~~-----------~~~~~~~~~l~~L~p~t~Y~~~V 69 (102)
T d2cuha1 2 DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-LQAE-----------TPGSAVDYPLHDLVLHTNYTATV 69 (102)
T ss_dssp SSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCC-EEEE-----------EETTCSEEEECSCCSSSEEEEEE
T ss_pred cCCCccEEEEeCCCEEEEEEEeeeccceeeEEEEEeccccc-eeee-----------eeeeeeeEEEccEEeeEEEEEEE
Confidence 36888888877799999999875432 33466776543221 1100 11223356799999999999999
Q ss_pred ccc-----C--CeeEEECCC
Q 013955 120 GRQ-----G--PEFEFKTPP 132 (433)
Q Consensus 120 ~~~-----s--~~~~F~T~p 132 (433)
... | ....|+|.+
T Consensus 70 ~a~~~~~~s~~~~~~~~T~~ 89 (102)
T d2cuha1 70 RGLRGPNLTSPASITFTTGL 89 (102)
T ss_dssp EEEETTEECCCEEEEEESCC
T ss_pred EEEeCCCCcCCEEEEEECCC
Confidence 641 1 235677754
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.0013 Score=48.99 Aligned_cols=73 Identities=10% Similarity=0.041 Sum_probs=40.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCC-------cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSP-------SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
..|..|.+...++++++|.|..+..... -.|+|.............. ...+....+.|.+|+|++
T Consensus 3 ~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 74 (101)
T d1iarb2 3 RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKSGI 74 (101)
T ss_dssp CCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----CC
T ss_pred ccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCCCC
Confidence 4788888887778999999997643221 3566766543322211111 123344567899999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.+||..
T Consensus 75 ~Y~~rVrA 82 (101)
T d1iarb2 75 SYRARVRA 82 (101)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00071 Score=49.80 Aligned_cols=79 Identities=15% Similarity=0.232 Sum_probs=51.0
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+.+.-.+.++++|.|....... .-.|+|....+...... ........+.|++|+|++.|.+
T Consensus 3 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~ 71 (93)
T d2vkwa2 3 APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----------RLPSGSDHVMLKSLDWNAEYEV 71 (93)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----------EECTTCCEEEECSCCTTCEEEE
T ss_pred CCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----------eccCCceEEEEeccccceEEEE
Confidence 68788777667999999999875432 23567766543211110 1122234578899999999999
Q ss_pred Eeccc-----C--CeeEEECC
Q 013955 118 RCGRQ-----G--PEFEFKTP 131 (433)
Q Consensus 118 ~v~~~-----s--~~~~F~T~ 131 (433)
||... | ....|+|.
T Consensus 72 ~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 72 YVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEEcCCCCcCCEeEEEEec
Confidence 99751 2 24667774
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.0011 Score=49.65 Aligned_cols=80 Identities=13% Similarity=0.282 Sum_probs=49.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+.+.-.+.+++.|.|..+... ..-.|+|............ .... ....|+||+|++.|.+|
T Consensus 12 ~~P~~~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~----------~~~~--~~~~i~~L~p~t~Y~~~ 79 (102)
T d1x5za1 12 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEPG--TSYRLQGLKPNSLYYFR 79 (102)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECSS--SEEEEECCCTTCEEEEC
T ss_pred cCCCCeEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE----------cCCc--CEEEECCCCCCCEEEEE
Confidence 47889988877799999999865321 1234556544322111100 0111 13568999999999999
Q ss_pred ecc--------cCCeeEEECCC
Q 013955 119 CGR--------QGPEFEFKTPP 132 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p 132 (433)
|.. .|....++|..
T Consensus 80 V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 80 LAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEEECSSCEEEECCCEEEECCC
T ss_pred EEEEcCCCEeCCCCCEEEEcCC
Confidence 864 24556677754
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=97.08 E-value=0.0042 Score=53.97 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=105.4
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 137 ITFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
+|++++||+ .+... ++.|..++ .+.||||..|.++-.+.- -..+.+.+++ ...+-++ +.|||=+....-
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~G~G-it~~~~~~l~---~~GvDvi-T~GNH~wdkkei 73 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAGGFG-MHRDAARGAL---EAGAGCL-TLGNHAWHHKDI 73 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTTTSS-CCHHHHHHHH---HHTCSEE-ECCTTTTSSTTH
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHHH-hhCCEEEECCccCCCCcC-CCHHHHHHHH---HcCCcEE-EcCchhhcchhH
Confidence 589999998 22222 33444554 458999999999764321 1112222222 1235554 899998854211
Q ss_pred ccccccccccccccCCCC--CCCCCCceEEEEeCeEEEEEEcc--cCCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 213 IMDAFQSYNARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 213 ~~~~~~~y~~~~~~p~~~--~~~~~~~~ys~~~g~v~fi~lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
. .-......+.-.|.+- .+.++..|+.++..+.++.++|- .........-..-+++.|++. +.+.+||=+|.
T Consensus 74 ~-~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~~---~~~~i~VDfHa 149 (255)
T d1t70a_ 74 Y-PMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFVDFHA 149 (255)
T ss_dssp H-HHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEEEEEC
T ss_pred H-HHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhhc---CCCeEEEEccc
Confidence 0 0011111123334332 23456778888888766666664 222222223344566666654 44568888886
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGNK 355 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~~ 355 (433)
=..+ . +.-.-.+-+.+|.+|+-=|+|....-..+. |+|+.|++ .|.-|..
T Consensus 150 EaTS-----------E-K~A~g~~ldGrvsav~GTHTHV~TaD~rIl-----p~GTay~TDvGMtG~~ 200 (255)
T d1t70a_ 150 EATS-----------E-KEAMGWHLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQTDAGFTGPH 200 (255)
T ss_dssp SCHH-----------H-HHHHHHHHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEESCCCCBEES
T ss_pred hhHH-----------H-HHHHHhhhcCcEEEEEecCcccccccceEe-----cCCcEEEecCccccch
Confidence 3211 1 223344556689999999999864333332 67999987 4555544
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.05 E-value=0.0012 Score=47.95 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...++++++|.|...... ..-.|+|............ .......+.|+||+|++.|.++|
T Consensus 2 ~~P~~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 70 (88)
T d1qr4a2 2 GSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVNI 70 (88)
T ss_dssp CCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEEE
T ss_pred cCCcceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----------ecCCccEEEECCCCCCCEEEEEE
Confidence 36888888888899999999865432 3346777765432211111 11223457899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 71 ~a 72 (88)
T d1qr4a2 71 IS 72 (88)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.05 E-value=0.0012 Score=47.70 Aligned_cols=69 Identities=10% Similarity=0.204 Sum_probs=47.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.++..+.++++|.|...... ..-.|+|....+...... ..+...++.|+||+||+.|.++|
T Consensus 2 ~~P~nl~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~~~~L~p~t~Y~v~V 69 (86)
T d1tdqa3 2 DSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVT------------VPRDRTSYTLTDLEPGAEYIISI 69 (86)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------------EESSCSEEEECCCCTTCCEEEEE
T ss_pred ccCCCCEEEEecCCEEEEEEeCCCCCccceEEEEecccccceEEE------------eCCCccEEEECCCccccEEEEEE
Confidence 36888999988899999999876533 234677876543211111 11223357899999999999998
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 70 ~a 71 (86)
T d1tdqa3 70 TA 71 (86)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.04 E-value=0.00077 Score=48.90 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.+|..+++...+.+++.|.|.-+... ..-.|+|....... ... ..+.......|+||+|++.|.++|
T Consensus 1 DaP~~l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~-~~~-----------~~~~~~~~~~~~~L~p~t~Y~v~V 68 (87)
T d1qr4a1 1 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKK-NEM-----------EIPVDSTSFILRGLDAGTEYTISL 68 (87)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCCE-EEE-----------EECTTCSEEEEESCCSSCEEEEEE
T ss_pred CcCcCcEEEEecCCEEEEEEECCCCCcceeEEEeecCCcce-eEE-----------eCCCCcCEEEECCCCcCCEEEEEE
Confidence 36899999988899999999976433 33467777654211 100 012223456899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 69 ~a 70 (87)
T d1qr4a1 69 VA 70 (87)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.03 E-value=0.00077 Score=50.25 Aligned_cols=73 Identities=18% Similarity=0.227 Sum_probs=47.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
|...|..+.+.-.+.++++|.|.-+... ..-.|+|....+...... .. .......++++||+||+
T Consensus 1 PP~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~-~~---------~~~~~~~~~v~~L~~~~ 70 (98)
T d1x5ya1 1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA-NK---------EPVERCGFTVKDLPTGA 70 (98)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES-SS---------SCBSSSEEEEECCCTTC
T ss_pred CCCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEe-ee---------ecCceeEEEECCCcCCe
Confidence 3457899988877899999999864322 224566766543322111 11 11112345788999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 71 ~Y~frV~A 78 (98)
T d1x5ya1 71 RILFRVVG 78 (98)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0016 Score=47.28 Aligned_cols=70 Identities=10% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
.|..+.+...+.++++|.|...... ....++|............ . ........+|+||+||+.|.++|.
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V~ 71 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-N---------LAPDSSSVVVSGLMVATKYEVSVY 71 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE-E---------ECTTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCEEEEEecCCEEEEEEEccceeccceEEEEEeeeCCCceEEE-E---------eCCCCeEEEEecccCceEEEEEEE
Confidence 4788888888899999999876433 2345667655432211110 0 112223478999999999999996
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 72 a 72 (90)
T d1fnha1 72 A 72 (90)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0014 Score=48.90 Aligned_cols=84 Identities=18% Similarity=0.118 Sum_probs=48.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
..|.-..+ -..+++++|.|.-+.... .-.|+|....+.......... ........+.|+||+|++.|
T Consensus 4 ~~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y 75 (101)
T d2haza1 4 SSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTY 75 (101)
T ss_dssp CCCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEH-------HHHHHHSEEEECSCCTTCEE
T ss_pred cCCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeee-------ecccceeEEEecCCCCCeEE
Confidence 36643333 345789999999764322 234666655432211111000 01112234689999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.|||.. .|+.-.|+|.|
T Consensus 76 ~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 76 AVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEeCCcCcCCCCceeEEeCC
Confidence 999964 25667788876
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0017 Score=47.32 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=46.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+++.-.+.+++.|.|...... ..-.|+|....+....... ...+....+.|+||+|++.|.++|
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----------SISPSDNAVVLTNLLPGTEYVVSV 72 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE----------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred cCCceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE----------EeCCCceEEEEeceeCCCEEEEEE
Confidence 4888888877799999999865422 2336778765443221110 112234457899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~a 74 (91)
T d1fnfa2 73 SS 74 (91)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.002 Score=48.41 Aligned_cols=70 Identities=9% Similarity=0.020 Sum_probs=40.5
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
|..+.+.-.+.++++|.|.-..... .-.|+|....+......... ..+..+...|++|+|++.|.+|
T Consensus 10 P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~fr 80 (105)
T d2d9qb2 10 DPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQ 80 (105)
T ss_dssp CC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEE
T ss_pred CCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEE
Confidence 4444455556889999998654322 24567776543322222111 2344566789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 81 Vra 83 (105)
T d2d9qb2 81 IRC 83 (105)
T ss_dssp EEE
T ss_pred EEE
Confidence 963
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0015 Score=49.01 Aligned_cols=78 Identities=19% Similarity=0.209 Sum_probs=48.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+...+++++.|+|..+.... .-.|+|............. . .....|+||+|++.|.
T Consensus 12 ~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~i~~L~p~t~Y~ 78 (103)
T d1x5ga1 12 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-----------S--SHSYTINGLKKYTEYS 78 (103)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-----------C--SSEEEECSCCTTCEEE
T ss_pred ccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEec-----------c--ccEEecCCCCCCCEEE
Confidence 467788888777999999998654322 2346666554322211111 1 1245789999999999
Q ss_pred EEecc--------cCCeeEEECC
Q 013955 117 YRCGR--------QGPEFEFKTP 131 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~ 131 (433)
++|.. .|+...++|.
T Consensus 79 ~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 79 FRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEcCCcCcCCCCCEEEEcC
Confidence 99964 2344556664
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.002 Score=47.17 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=46.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+.-.+.+++.|.|..+... ..-.|+|....+.. . .. ..+.....+.|+||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~-~-------~~----~~~~~~~~~~i~~L~p~t~Y~~~V 70 (93)
T d2cuma1 3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQT-Q-------EI----LLPGGITSHQLLGLFPSTSYNARL 70 (93)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSCE-E-------EE----EECSSCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccccccEEEEEEcccccc-E-------EE----EECCCccEEEEeCccCCCEEEEEE
Confidence 46888888877799999999876433 33466776643211 0 00 012223456899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 71 ~a 72 (93)
T d2cuma1 71 QA 72 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.002 Score=48.52 Aligned_cols=65 Identities=12% Similarity=0.078 Sum_probs=39.6
Q ss_pred EEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 48 ISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
+.-.+.+++.|.|........ ..|+|....+...+..... .....+..+|++|.|+|.|.+||..
T Consensus 16 ~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~---------~~~~~~~~~l~~L~p~t~Y~frVra 84 (106)
T d1cd9b2 16 VVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH---------LPSSKDQFELCGLHQAPVYTLQMRC 84 (106)
T ss_dssp ----CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE---------EESCEEEEEECCCCSCSCEEEEEEE
T ss_pred EecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeec---------ccCCceEEEEeccCCCeEEEEEEEE
Confidence 444568899999986543332 3677876544333322211 1223556779999999999999963
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.00087 Score=49.96 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=48.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.+..|..+++.-.+.++++|.|...... ....|+|.................... ...+......|+||+|++.|.+
T Consensus 3 ~Pp~~~~l~v~~~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~L~p~t~Y~~ 80 (101)
T d2cuia1 3 SRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL--MVPGTRHSAVLRDLRSGTLYSL 80 (101)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE--EEETTCCEEEECSCCTTCEEEE
T ss_pred CccCCCCcEEEEECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEe--ecccceeEEEeCCCCcCCEEEE
Confidence 3447888889977899999999655322 234677776543221111100000000 1223345567899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 81 ~V~a 84 (101)
T d2cuia1 81 TLYG 84 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0011 Score=51.13 Aligned_cols=86 Identities=16% Similarity=0.283 Sum_probs=53.8
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEe----ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYG----TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.++..|..+.+...+++++.|.|..... .......|. .... ... .... ...+......|+||+|
T Consensus 10 ~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~------~~~--~~~~--~~~~~~~~~~i~~L~p 79 (119)
T d1x5ha1 10 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR------KSD--VTET--LVSGTQLSQLIEGLDR 79 (119)
T ss_dssp SCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE------EEE--EECC--BCCTTCCEEEEECCCS
T ss_pred CCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeeccc------ccc--eeee--ecCCCccEEEeCCCCC
Confidence 4566799999887779999999986532 111233343 2221 000 0000 1223345678999999
Q ss_pred CCEEEEEecc--------cCCeeEEECCCC
Q 013955 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
++.|.++|.. .|....|+|.+.
T Consensus 80 ~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 80 GTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp SCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 9999999964 256778888653
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0022 Score=46.67 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=46.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+++.-.+.++++|.|.-.... ..-.|+|....+...... ..........|++|+||+.|.++|
T Consensus 3 spP~~l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~V 71 (90)
T d1fnha2 3 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIYL 71 (90)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----------ECCTTCSEEEEESCCTTCEEEEEE
T ss_pred CcCCCCEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----------ecCCCccEEEeCCCCCCcEEEEEE
Confidence 35888999888899999999865433 334667766543221111 112223456789999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 72 ~a 73 (90)
T d1fnha2 72 YT 73 (90)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.90 E-value=0.0044 Score=54.59 Aligned_cols=191 Identities=16% Similarity=0.185 Sum_probs=103.0
Q ss_pred CCeEEEEEecCCCCCChHH----HHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCC
Q 013955 135 FPITFAVAGDLGQTGWTKS----TLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~----~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~ 209 (433)
..+|++++||+ .+..... .|..+. +.++||||..|-++-.+.- -..+.+.+++ ...+-++ +.|||=+..
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~G-it~k~~~eL~---~~GvDvI-T~GNH~wd~ 76 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKG-LSLKHYEFLK---EAGVNYI-TMGNHTWFQ 76 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSS-CCHHHHHHHH---HHTCCEE-ECCTTTTCC
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcC-CCHHHHHHHH---HhCCcEE-EcCchhhhc
Confidence 46899999998 2322233 344443 7799999999999864321 1111211111 1235554 899998753
Q ss_pred CCcccccccccccccccCCCC-----CCCCCCceEEEEeCeEEEEEEcccCC-C-C--CChHHHHHHHHHhhccccCCCC
Q 013955 210 IPLIMDAFQSYNARWKMPFEE-----SGSNSNLYYSFDVAGAHLIMLGSYAD-Y-D--EYSDQYRWLKDDLSKVDRKKTP 280 (433)
Q Consensus 210 ~~~~~~~~~~y~~~~~~p~~~-----~~~~~~~~ys~~~g~v~fi~lds~~~-~-~--~~~~Q~~WL~~~L~~~~~~~~~ 280 (433)
.... .+-.-..+.-.|.|- .+..+..|..++.++.++.+++-... + . .......-+++.+... +.+
T Consensus 77 kei~--~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~~---~~d 151 (281)
T d1t71a_ 77 KLDL--AVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILKR---DCD 151 (281)
T ss_dssp GGGH--HHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTTC---CCS
T ss_pred hhhH--HHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhccc---CCC
Confidence 2110 111111222233331 12345668888877666666654211 1 1 1122233344444332 556
Q ss_pred eEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCC
Q 013955 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGG 353 (433)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG 353 (433)
.+||=+|.=..+ . +.-.-.+-+.+|.+|+-=|+|....-..+. ++|+-|++ .|.-|
T Consensus 152 ~i~VDfHaEATS-----------E-K~A~g~~lDGrvsaVvGTHTHV~TaD~rIL-----p~GTAyiTDvGMtG 208 (281)
T d1t71a_ 152 LHIVDFHAETTS-----------E-KNAFCMAFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYITDVGMCG 208 (281)
T ss_dssp EEEEEEECSCHH-----------H-HHHHHHHHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEESCCCEEB
T ss_pred eEEEEeccchhh-----------h-hhhheeeeCCcEEEEEecCcccccCccccc-----cCCeEEEecCcccc
Confidence 788888863211 1 223344556789999999999854333332 67999987 34434
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0015 Score=48.36 Aligned_cols=69 Identities=13% Similarity=0.217 Sum_probs=47.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
.+|..+.|...+.+++.|.|..+... -.-.|+|....... ...... ......+|.+|.|++.|.+|
T Consensus 4 ~~P~nl~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~-~~~~~~-----------~~~~~~~~~~L~p~t~Y~fr 71 (95)
T d2b5ic1 4 WAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHS-WTEQSV-----------DYRHKFSLPSVDGQKRYTFR 71 (95)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSS-CEEEEE-----------CSSCEEEECSCCTTSCEEEE
T ss_pred cCCCCCEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCce-eeEeee-----------cccceeEcCCCCCCCEEEEE
Confidence 47999999877899999999976432 23467777664322 211111 11235788999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 72 VRa 74 (95)
T d2b5ic1 72 VRS 74 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.0015 Score=48.45 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=43.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
...|..|.+.-.+++++.|+|....... .-.|+|............ .......++|+||+|
T Consensus 2 ~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p 70 (100)
T d1x5ja1 2 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKP 70 (100)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----------CCBCSSEEEEESCCT
T ss_pred CCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----------cCCCccEEEECCCCC
Confidence 3468889888778999999998642111 123455444322111111 011122467899999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
+|.|.+||..
T Consensus 71 ~t~Y~~~V~a 80 (100)
T d1x5ja1 71 NTLYEFSVMV 80 (100)
T ss_dssp TCEECCEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.0015 Score=47.41 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=47.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+.-.+.++++|.|.-+... ..-.|+|....+..... .- ........+.|+||+||+.|.++|
T Consensus 2 daP~nl~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~L~p~t~Y~~~V 71 (89)
T d1fnha3 2 DAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREV-VP---------RPRPGVTEATITGLEPGTEYTIYV 71 (89)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEEC-TT---------CCCTTCCEEEEESCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEE-EE---------EcCCCccEEEEEeeeCCCEEEEEE
Confidence 36888988877899999999865432 33467777654321100 00 112223457889999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 72 ~a 73 (89)
T d1fnha3 72 IA 73 (89)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.00088 Score=50.28 Aligned_cols=73 Identities=16% Similarity=0.219 Sum_probs=44.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
|...|..+.+.-.+.++++|+|..+... ..-.++|............ .........+++||+|+|
T Consensus 2 Pp~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t 71 (104)
T d1bpva_ 2 PIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKAN----------FSNILENEFTVSGLTEDA 71 (104)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECC----------CSCCCSSEEEECSCCSSC
T ss_pred CCCCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEE----------eeccceeEEEEcCCCCCC
Confidence 3456666666666789999999865322 1235566654432221111 011223346789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 72 ~Y~frV~A 79 (104)
T d1bpva_ 72 AYEFRVIA 79 (104)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.003 Score=46.40 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=46.7
Q ss_pred CCCCceEEEEecC-CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 40 SSHPQQVHISLAG-DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 40 ~~~p~qv~l~~~~-~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
...|..+++.-.. .+.++|.|.-.... ..-.|+|....+.......- ...+....+.|+||+||+.|.
T Consensus 2 ~~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t~Y~ 72 (94)
T d1fnfa1 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---------VVHADQSSCTFDNLSPGLEYN 72 (94)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---------EECTTCCEEECCCCCTTSCEE
T ss_pred CCcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEEE---------EeCCCccEEEECCCCCCCEEE
Confidence 4578899888665 45699999865332 23456787654332211110 112334568899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
.+|..
T Consensus 73 v~V~a 77 (94)
T d1fnfa1 73 VSVYT 77 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0017 Score=47.71 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=44.8
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+.+.-.+.++++|.|...... ..-.|+|....+.... ... ..........|+||+||+.|.++|
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~-~~~---------~~~~~~t~~~i~~L~p~t~Y~~~V 77 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI-FED---------FVDSSVGYYTVTGLEPGIDYDISV 77 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEE-EEE---------ECCSSCSEEEECCCCTTSEEEEEE
T ss_pred cCCCeEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceE-EEE---------EeCCCCeEEEEecccCCEEEEEEE
Confidence 4778888877799999999765322 2235666655432111 110 112233456899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 78 ~a 79 (95)
T d2fnba_ 78 IT 79 (95)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.79 E-value=0.00035 Score=60.38 Aligned_cols=63 Identities=30% Similarity=0.315 Sum_probs=42.9
Q ss_pred EEEEEecCCCCCC-hHHHHHHhh-cCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~-~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
|++++||+|.... .+++++.+. ....|.++++||+++.+.... + ..+++ ...-+..+.||||.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~--~-vl~~l----~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV--E-CLELI----TFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH--H-HHGGG----GSTTEEECCCHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH--H-HHHHh----hccccccccCcHHH
Confidence 6889999985422 345666665 356789999999998776422 1 11222 23457889999996
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0061 Score=46.16 Aligned_cols=83 Identities=19% Similarity=0.240 Sum_probs=51.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..|..|+|.. ..+++.|+|..+.... .-.|+|......-..... . ........+.+.+|.
T Consensus 7 ~pP~nl~v~~-~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~L~ 76 (114)
T d2gysa2 7 PEPRDLQIST-DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI-L--------LSNTSQATLGPEHLM 76 (114)
T ss_dssp CCCEEEEEEE-ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE-E--------EESSSEEEECTTTCC
T ss_pred CcCCCeEEEE-eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE-e--------eccCceEEEEeCCCC
Confidence 4789998874 4678999998874321 124566655432211111 1 112334467889999
Q ss_pred CCCEEEEEecc--------------cCCeeEEECCCC
Q 013955 111 HDTVYFYRCGR--------------QGPEFEFKTPPA 133 (433)
Q Consensus 111 p~t~Y~Y~v~~--------------~s~~~~F~T~p~ 133 (433)
|++.|.+||.. +|+...|+|+|.
T Consensus 77 p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 77 PSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp TTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 99999999953 245678888773
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.69 E-value=0.0046 Score=46.44 Aligned_cols=75 Identities=15% Similarity=0.235 Sum_probs=39.7
Q ss_pred EEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEE--eeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 47 HISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSY--RYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 47 ~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
.+.-.+.++++|.|.-......+ .|+|........+......... .......+.....+|+||+|++.|.|||.
T Consensus 7 ~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~ 86 (107)
T d2ic2a1 7 NVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRIL 86 (107)
T ss_dssp EEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEE
T ss_pred EEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEE
Confidence 45656789999999987543333 3556554332222211111000 00001233456789999999999999997
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 87 A 87 (107)
T d2ic2a1 87 A 87 (107)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.0041 Score=46.88 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=46.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+.-.+.++++|.|.-..... ...|+|............... . . ..........|+||+|++.|
T Consensus 11 P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~v~~L~p~t~Y 85 (111)
T d1wisa1 11 PGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-Q--L--SNEPDARSMEVPDLNPFTCY 85 (111)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-E--E--ESCTTCSEEEECSCCTTSEE
T ss_pred CcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeee-e--e--ecccceeEEEeCCCCCCCEE
Confidence 3478889888667999999998553322 234566544322211111100 0 0 12233345678999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.+||..
T Consensus 86 ~frV~A 91 (111)
T d1wisa1 86 SFRMRQ 91 (111)
T ss_dssp CCCCEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.66 E-value=0.0006 Score=52.84 Aligned_cols=86 Identities=15% Similarity=0.208 Sum_probs=49.8
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCC---CCeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGG---YNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
..+...|..+.+.-.+.++++|.|...... ..-.++|...... ..+.... ... ....+|++
T Consensus 13 ~~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~---------~~~--~~~~~v~~ 81 (120)
T d1wfua_ 13 VVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY---------TGY--ATRHVVEG 81 (120)
T ss_dssp CCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE---------EES--CSEEEEES
T ss_pred ccCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeec---------ccc--ccEEeCCC
Confidence 345556666655555689999999865321 1224566542111 1111110 011 12357899
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|+|++.|.|||.. .|+...++|.+.
T Consensus 82 L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 82 LEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp CCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred CCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 9999999999974 256677887543
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0021 Score=48.28 Aligned_cols=81 Identities=12% Similarity=0.156 Sum_probs=49.2
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEe----ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYG----TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+..|..+.+.-.+.++++|+|.-......+...|. ............ .+......+.+|+|++.|
T Consensus 11 P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~L~p~t~Y 79 (105)
T d1x3da1 11 PDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-----------MGSQKQFKITKLSPAMGC 79 (105)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-----------EESCSEEEEESCCTTCEE
T ss_pred CcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEe-----------cCCccEEEecCCcCCcEE
Confidence 34788888887779999999987654333434443 222211111110 111224567899999999
Q ss_pred EEEecc--------cCCeeEEECC
Q 013955 116 FYRCGR--------QGPEFEFKTP 131 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~ 131 (433)
.+||.. .|+...|+|.
T Consensus 80 ~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 80 KFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEECCCeEcCCCCcEEEECC
Confidence 999974 2455666664
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0017 Score=47.58 Aligned_cols=71 Identities=14% Similarity=0.206 Sum_probs=46.9
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+.-.+.++++|.|..... .....++|........ . . . ...........|+||+||+.|.++|
T Consensus 3 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-----~--~-~--~~~~~~~~~~~i~~L~p~t~Y~~~V 72 (94)
T d1j8ka_ 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E--L-F--PAPDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E--E-C--CCCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCCCEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCc-----e--E-E--EecCCCccEEEECCCCCCCEEEEEE
Confidence 4688888887789999999976533 2334667766543110 0 0 0 0122334567899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~a 74 (94)
T d1j8ka_ 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0063 Score=45.77 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=44.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+. .+.++++|.|.-.... ..-.|+|....+. ...... ........+.|++|+|++.|
T Consensus 8 ~sPP~~~~~~-~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~---------~~~~~~~~~~i~~L~p~t~Y 76 (108)
T d1v5ja_ 8 LSPPRGLVAV-RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDP---------AVAGTETELLVPGLIKDVLY 76 (108)
T ss_dssp CCCCEEEEEE-ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEE---------EECSSCCEEECCCCCTTSCE
T ss_pred CCcCCCeEEE-EcCCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccc---------cccceeeeEEEEeccCCcEE
Confidence 3467777655 4678999999864322 1236677655432 111111 11233456789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 77 ~~rV~A 82 (108)
T d1v5ja_ 77 EFRLVA 82 (108)
T ss_dssp ECCBEE
T ss_pred EEEEEE
Confidence 999974
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.015 Score=43.11 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=43.4
Q ss_pred CCCCceEEEEecC-CCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 40 SSHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 40 ~~~p~qv~l~~~~-~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
...|..+.+.... .+.+.+.|....... .-.|+|............ ........+.|.+|+|++
T Consensus 5 ~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t 74 (105)
T d1erna2 5 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRV----------EILEGRTECVLSNLRGRT 74 (105)
T ss_dssp CCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEE----------EECTTCCEEEECSCCSSC
T ss_pred cCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEE----------eecCCccEEEEeCCCCCc
Confidence 3478888888765 567999998754221 135666555332111111 011122356789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.+||..
T Consensus 75 ~Y~~rVRa 82 (105)
T d1erna2 75 RYTFAVRA 82 (105)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0094 Score=43.11 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=42.0
Q ss_pred EEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 46 VHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
+++.-.++++++|.|..+... ..-.|+|....+....... . .++....+.|+||+||+.|.++|..
T Consensus 3 l~v~~~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~------~----~~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 3 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF------T----VPGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp CEEEEECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEEE------E----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEeCCCEEEEEEEccceEecEEEEEEEcCCCCceeEEE------E----eCCCccEEEeCCCCCCCEEEEEEEE
Confidence 456666799999999765433 3346777766432221110 0 1122335789999999999999964
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0043 Score=45.90 Aligned_cols=69 Identities=14% Similarity=0.124 Sum_probs=41.6
Q ss_pred CCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc-----
Q 013955 52 GDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR----- 121 (433)
Q Consensus 52 ~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~----- 121 (433)
..++++|+|.-.... ..-.|+|............ . .. ....+|++|+|++.|.|||..
T Consensus 15 ~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~-~---------~~--~~~~~v~~L~p~t~Y~frV~A~N~~G 82 (97)
T d2crza1 15 KAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q---------GS--EVECTVSSLLPGKTYSFRLRAANKMG 82 (97)
T ss_dssp CSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E---------ES--CSEEEEESCCTTCEEEECCEEECSSC
T ss_pred eCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee-c---------CC--ceEEEEcCCCCCEEEEEEEEEecCCe
Confidence 478999999854321 2245666654432221111 0 11 123578999999999999964
Q ss_pred ---cCCeeEEECCC
Q 013955 122 ---QGPEFEFKTPP 132 (433)
Q Consensus 122 ---~s~~~~F~T~p 132 (433)
.|+...++|.|
T Consensus 83 ~s~~S~~~~~~T~p 96 (97)
T d2crza1 83 FGPFSEKCDITTAP 96 (97)
T ss_dssp BCCCCCCEEEECCC
T ss_pred EcCCcCCCeEEeCc
Confidence 25666777765
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.35 E-value=0.0056 Score=45.80 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=47.2
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
+|...|..|.+...+.++++|+|.-.. . ...-.|+|............- .........+|.+|+|
T Consensus 3 ~P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p 73 (105)
T d1cfba2 3 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---------IFDWRQNNIVIADQPT 73 (105)
T ss_dssp CCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---------ECCTTCCEEEECSCCS
T ss_pred CCCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEE---------ecCCCccEEEECCCCC
Confidence 455678888888777899999996421 1 122356676554322211110 1123344678999999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.++|..
T Consensus 74 ~t~Y~~~V~A 83 (105)
T d1cfba2 74 FVKYLIKVVA 83 (105)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999965
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.00056 Score=51.28 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=46.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+...+++++.|.|.-...... -.|+|......... .+...... ........++|+||+|++.|.
T Consensus 4 ~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 78 (103)
T d1qg3a2 4 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRP--IGPMKKVL---VDNPKNRMLLIENLRESQPYR 78 (103)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCB--CSCCEEEE---ECCTTCCEEEECCCCTTCCEE
T ss_pred ccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeecccccccc--ccceEEEE---ecCCCceEEEEeecCCCCEEE
Confidence 3788888888889999999986543222 24556554332111 00000000 112223467899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
+||..
T Consensus 79 ~~V~A 83 (103)
T d1qg3a2 79 YTVKA 83 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.0079 Score=45.22 Aligned_cols=66 Identities=12% Similarity=0.162 Sum_probs=37.7
Q ss_pred EEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 46 VHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
+.+.-.+.+++.|.|........ -.|+|....+.. ..... ........+.|+||+|++.|.|||..
T Consensus 19 ~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~-~~~~~---------~~~~~~~~~~i~~L~p~t~Y~frV~A 88 (108)
T d1wf5a1 19 ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPW-TVLLA---------SVDPKATSVTVKGLVPARSYQFRLCA 88 (108)
T ss_dssp EEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCC-EEEES---------SCCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred EEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCc-eEEee---------eecCCccEEEECCCCCCCEEEEEEEE
Confidence 33333447899999987543322 244555443211 11111 11222334678999999999999975
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0059 Score=46.57 Aligned_cols=72 Identities=11% Similarity=0.181 Sum_probs=45.1
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+.-.+.+++.|.|.-+.... .-.|+|.............. .........|++|+|++.|.
T Consensus 22 ~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 92 (117)
T d1wfoa1 22 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV---------LAPSARQYTATGLKPESVYL 92 (117)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE---------ECTTCCEEEEESCCSSSEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe---------cCCceEEEEECCCCCCCEEE
Confidence 478888888778999999997554322 23466665543222111100 11122345689999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
+||..
T Consensus 93 ~~V~A 97 (117)
T d1wfoa1 93 FRITA 97 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.22 E-value=0.006 Score=45.06 Aligned_cols=72 Identities=13% Similarity=0.184 Sum_probs=43.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+..|..+.+.. +.++++|.|.-..... .-.|+|............... ... .....+.+|+|++.|
T Consensus 6 P~~P~~~~v~~-~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~L~p~t~Y 75 (100)
T d1cfba1 6 PNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK-------VPN--TDSSFVVQMSPWANY 75 (100)
T ss_dssp CCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE-------EET--TCSEEEEECCSSEEE
T ss_pred CCcCcCcEEEE-cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee-------cCC--ceEEEEecCCCCCEE
Confidence 34888888874 5678999998554322 235667655433222211110 011 122457799999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 76 ~frV~A 81 (100)
T d1cfba1 76 TFRVIA 81 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.017 Score=42.48 Aligned_cols=79 Identities=11% Similarity=0.101 Sum_probs=42.6
Q ss_pred CCCceEEEEec----CCCcEEEEEEcCCCC----CCcEEEE----eccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 41 SHPQQVHISLA----GDSHMRVTWITDDES----SPSVVEY----GTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 41 ~~p~qv~l~~~----~~~~~~i~W~t~~~~----~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
..|..+.+... +.+++.|.|...... ....++| ............ ......++|.|
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECC
Confidence 36777777633 367899999976421 1123444 333321111110 11233467899
Q ss_pred CCCCCEEEEEecc---------cCCeeEEECC
Q 013955 109 LEHDTVYFYRCGR---------QGPEFEFKTP 131 (433)
Q Consensus 109 L~p~t~Y~Y~v~~---------~s~~~~F~T~ 131 (433)
|+|++.|.+||.. +|+...++||
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999964 2455566665
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.17 E-value=0.023 Score=41.85 Aligned_cols=68 Identities=9% Similarity=0.060 Sum_probs=40.7
Q ss_pred CCceEEEEec----CCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 42 HPQQVHISLA----GDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 42 ~p~qv~l~~~----~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.|..+.+... ..++++|+|..+.... .-.|+|............. .......|.||
T Consensus 5 pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~------------~~~~~~~i~~L 72 (103)
T d1f6fb2 5 PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFT------------GHQTQFKVFDL 72 (103)
T ss_dssp CCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEE------------ETCSEEEECCC
T ss_pred CCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecc------------cceeEEEeCCC
Confidence 6777666532 3678999999764321 1244555544322211110 11235688999
Q ss_pred CCCCEEEEEecc
Q 013955 110 EHDTVYFYRCGR 121 (433)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (433)
+||+.|.+||..
T Consensus 73 ~p~t~Y~~rVra 84 (103)
T d1f6fb2 73 YPGQKYLVQTRC 84 (103)
T ss_dssp CTTCEEEEEEEE
T ss_pred CcceEEEEEEEE
Confidence 999999999964
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0069 Score=45.91 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=42.9
Q ss_pred CCCceEEEEecC--CCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 41 SHPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 41 ~~p~qv~l~~~~--~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
..|..+.+...+ .++++|.|.-..... .-.|+|....+......... ...+....+.|++|.|++.
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccc--------cccccccEEeeCCCccCcE
Confidence 367777776544 788999998543222 23556665443221111000 1123345678999999999
Q ss_pred EEEEec
Q 013955 115 YFYRCG 120 (433)
Q Consensus 115 Y~Y~v~ 120 (433)
|.+||.
T Consensus 78 Y~~~V~ 83 (115)
T d1bqua2 78 YVFRIR 83 (115)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999995
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.0036 Score=47.95 Aligned_cols=71 Identities=8% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+...+.++++|.|.-..... .-.|+|........+..... .... ...+|++|+|++.|.
T Consensus 17 ~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~--~~~~v~~L~p~t~Y~ 86 (117)
T d1uema_ 17 GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HVKT--TLYTVRGLRPNTIYL 86 (117)
T ss_dssp BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EECS--SEEEECSCCTTCEEE
T ss_pred cCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--------cccc--ccceECCCCCCCEEE
Confidence 368888888778999999996432221 23455554432211111110 0111 245789999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|||..
T Consensus 87 frV~A 91 (117)
T d1uema_ 87 FMVRA 91 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.0098 Score=44.42 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=35.9
Q ss_pred EecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 49 SLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 49 ~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
...+.++++|.|..+.... .-.|+|............. .+......++||+||+.|.+||..
T Consensus 21 ~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~rV~A 87 (107)
T d2crma1 21 GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-----------SGATREHLCDRLNPGCFYRLRVYC 87 (107)
T ss_dssp EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-----------CSSCSEEEECSCCTTSCEEEEEEE
T ss_pred eeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEee-----------cCCccEEEEeccCCCCEEEEEEEE
Confidence 3345889999998643221 2344554443322221111 111223578999999999999965
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.018 Score=43.03 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=43.4
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCCCC-------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 39 PSSHPQQVHISLAG--DSHMRVTWITDDESS-------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 39 ~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~-------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
-...|..+.+.... .+++.|.|..+.... .-.++|............ ........|.+|
T Consensus 7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 74 (109)
T d1uc6a_ 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE------------LSNGTAHTITDA 74 (109)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE------------ESSCSEEEETTC
T ss_pred ECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEec------------cCCceeEEeCCC
Confidence 34478888887643 678999999864221 123455544332211111 111234678999
Q ss_pred CCCCEEEEEecc
Q 013955 110 EHDTVYFYRCGR 121 (433)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (433)
+|++.|.+||..
T Consensus 75 ~~~t~Y~~rVrA 86 (109)
T d1uc6a_ 75 YAGKEYIIQVAA 86 (109)
T ss_dssp CSSSCEEEEEEC
T ss_pred CCCCEEEEEEEE
Confidence 999999999964
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.93 E-value=0.025 Score=42.09 Aligned_cols=82 Identities=7% Similarity=0.013 Sum_probs=48.8
Q ss_pred CCCCCCceEE-EEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVH-ISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~-l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.++..|..|. ++....++|+++|.-..... ...+.|............... .. ..........+.+++|+|++
T Consensus 3 ~PP~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~L~~~t 79 (107)
T d1cd9b1 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIP--DC-VAKKRQNNCSIPRKNLLLYQ 79 (107)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEE--EE-ECCTTCCEEEEEGGGCCTTS
T ss_pred CccCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeee--ee-ccccCccccEEEcCCCCcCc
Confidence 3566899887 66666899999998653322 234556544322111110000 00 00123456678899999999
Q ss_pred EEEEEeccc
Q 013955 114 VYFYRCGRQ 122 (433)
Q Consensus 114 ~Y~Y~v~~~ 122 (433)
.|.+||...
T Consensus 80 ~Y~frV~A~ 88 (107)
T d1cd9b1 80 YMAIWVQAE 88 (107)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999999763
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.84 E-value=0.01 Score=46.52 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=24.8
Q ss_pred EEEEeCCCCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 102 HHTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 102 ~~v~l~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
..++|+||+|+|.|.+||.. .|+...|+|++
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~ 120 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLS 120 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCC
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCC
Confidence 35689999999999999964 25677899854
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.80 E-value=0.0077 Score=45.00 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=44.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+.-.+.+++.|.|....... .-.|+|............ ...+......|+||+|++.|.
T Consensus 12 ~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 81 (106)
T d1wfna1 12 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYT 81 (106)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE----------ecCCCeeEEEEccCCCCCEEE
Confidence 378888888667899999998654322 234556554322111000 112223456789999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 82 ~~V~A 86 (106)
T d1wfna1 82 IEVAA 86 (106)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.036 Score=39.95 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=41.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|. +.+.-.+.++++|.|.-+.... .-.|+|............ ........+|++|+|++.|.+
T Consensus 3 ~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d2dn7a1 3 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 70 (94)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----------cCCCccEEEEEccCCeeEEEE
Confidence 564 4455566899999999764332 234667655432221111 011223457899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 71 ~V~A 74 (94)
T d2dn7a1 71 RLAA 74 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9974
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.65 E-value=0.02 Score=44.04 Aligned_cols=72 Identities=14% Similarity=0.195 Sum_probs=44.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+.+...+.++++|.|.-...... ..++|............-. .........|.+|+|++.|.
T Consensus 18 ~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 88 (127)
T d1ueya_ 18 NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT---------EVSGTQTTAQLNLSPYVNYS 88 (127)
T ss_dssp CCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE---------EEESSCCEEEECCCTTCEEC
T ss_pred cCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEe---------ecCCceEEEECCCccCCEEE
Confidence 4789999887789999999986543332 2344444332222111111 01112235678999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
+||..
T Consensus 89 frV~A 93 (127)
T d1ueya_ 89 FRVMA 93 (127)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.59 E-value=0.015 Score=43.87 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=44.2
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.....|..+++.. ..+++.|.|.-..... .-.|+|+..... .... .........+|.+|+|++
T Consensus 19 ~vP~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~-----------~~~~~~~~~~i~~L~p~t 85 (113)
T d1x5ia1 19 RVPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTI-----------KVDYKQRYYTIENLDPSS 85 (113)
T ss_dssp SCCCSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEE-----------ECCTTCCEEEECSCCSSC
T ss_pred CCCCCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeecccc-ceee-----------eeeCCccEEEEeccccCc
Confidence 3456788888874 4679999999654322 224555543221 1110 112234456899999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.++|..
T Consensus 86 ~Y~~~V~A 93 (113)
T d1x5ia1 86 HYVITLKA 93 (113)
T ss_dssp EECCEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.48 E-value=0.021 Score=43.76 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=44.4
Q ss_pred CCCcEEEEEEcCCCCC---CcEEEEeccCCCCC---eeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc----
Q 013955 52 GDSHMRVTWITDDESS---PSVVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR---- 121 (433)
Q Consensus 52 ~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~---- 121 (433)
+++++.|+|.-+.... .-.|.|........ +... . .........+|+||+|+|.|.+||..
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~~~~~~-~--------v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~ 98 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL-D--------AKVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE-E--------CCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCcceEEE-E--------eccCceeEEEECCCCCCCEEEEEEEEEeCC
Confidence 4789999998764322 24677765432211 1110 0 11223445678999999999999864
Q ss_pred ----cCCeeEEECCCC
Q 013955 122 ----QGPEFEFKTPPA 133 (433)
Q Consensus 122 ----~s~~~~F~T~p~ 133 (433)
.|+...++|++.
T Consensus 99 G~G~~S~~~~~~T~e~ 114 (120)
T d1ujta_ 99 FQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCCEEEEECSS
T ss_pred cCcCCCCCEEEEeCCC
Confidence 245667777653
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.46 E-value=0.053 Score=41.33 Aligned_cols=92 Identities=9% Similarity=0.008 Sum_probs=50.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEee--eeEEeee---eeecCeEEEEEeCCCCC
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGE--STSYRYL---FYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~v~l~~L~p 111 (433)
..|..|.++. ..+++.|+|.-.... ..-.|+|.............. ...+... ....+......|.+|+|
T Consensus 9 ~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 87 (123)
T d1wfta_ 9 GAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTS 87 (123)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCSS
T ss_pred cCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCCC
Confidence 3788898874 578999999955332 234677766543321110000 0000000 00011112236789999
Q ss_pred CCEEEEEeccc--------CCeeEEECCCC
Q 013955 112 DTVYFYRCGRQ--------GPEFEFKTPPA 133 (433)
Q Consensus 112 ~t~Y~Y~v~~~--------s~~~~F~T~p~ 133 (433)
++.|.|||... ++...|+|...
T Consensus 88 ~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 88 RPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp SCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred CCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 99999999751 35566777543
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.024 Score=41.85 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=43.9
Q ss_pred CCCceEEEEecC--CCcEEEEEEcCCC--CC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 41 SHPQQVHISLAG--DSHMRVTWITDDE--SS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 41 ~~p~qv~l~~~~--~~~~~i~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
..|..+.|+..+ ++++.|+|..... .. ...|+|............ ..+......|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCC
Confidence 478888888754 6789999997532 11 134556655432211111 1122345678999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.69 E-value=0.001 Score=50.00 Aligned_cols=89 Identities=13% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.+...|..|.+....++++.|.|..+.......+.|...=............. .......+...|.+|+|++ |.+
T Consensus 3 ~~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~t-Y~~ 77 (102)
T d2dtge1 3 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT----RKHFALERGCRLRGLSPGN-YSV 77 (102)
T ss_dssp CCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC----SSSCCCTTCCCCCSCCSSE-ECC
T ss_pred CCCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeee----eecccceEEEEEeccceee-EEE
Confidence 45566777766656689999999876544444566654311000000000000 0112234456789999975 999
Q ss_pred Eecc--------cCCeeEEECC
Q 013955 118 RCGR--------QGPEFEFKTP 131 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~ 131 (433)
||.. .|+...|.|+
T Consensus 78 rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 78 RIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEcCCccCCCCCCEEEEcc
Confidence 9864 2455566654
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.58 E-value=0.039 Score=41.03 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=39.8
Q ss_pred CCceEEEEecC------CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 42 HPQQVHISLAG------DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 42 ~p~qv~l~~~~------~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
.|..+.++... .+++.|+|.-+.... .-.|+|+...+....... ......+.|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~------------~~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeee------------ecccceEEEC
Confidence 56666665432 347999998653211 235566655432211111 1112356789
Q ss_pred CCCCCCEEEEEecc
Q 013955 108 PLEHDTVYFYRCGR 121 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (433)
+|+|++.|.+||..
T Consensus 71 ~L~~~t~Y~frVRa 84 (106)
T d1axib2 71 SLKVDKEYEVRVRS 84 (106)
T ss_dssp EEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999954
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.94 E-value=0.089 Score=37.94 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=45.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
++..|..+.+...+.+++++.|.-..... ...|+|........... . ..........+.+|.|++.|
T Consensus 3 PP~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~L~~~~~Y 72 (95)
T d1bqua1 3 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCK-A---------KRDTPTSCTVDYSTVYFVNI 72 (95)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEE-C---------CSSCTTEEECSSCCCTTSCE
T ss_pred CcCCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEee-c---------ccccceeeeeeeecCCCcEE
Confidence 45688899998778899999998764332 23455554432111100 0 01111222456799999999
Q ss_pred EEEeccc
Q 013955 116 FYRCGRQ 122 (433)
Q Consensus 116 ~Y~v~~~ 122 (433)
++||...
T Consensus 73 ~f~V~A~ 79 (95)
T d1bqua1 73 EVWVEAE 79 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999763
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.83 E-value=0.025 Score=43.33 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=43.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-CcEEEEec----cCCCC-Ce----eEEeee--------eEEeeeeeecCeEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGT----SPGGY-NC----GAEGES--------TSYRYLFYRSGKIHH 103 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~----~~~~~-~~----~~~~~~--------~~~~~~~~~~~~~~~ 103 (433)
.|..+.+.-..++++.|+|.-+.... .....|.. .+... .. ...+.. ..........+....
T Consensus 4 ~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (125)
T d2dtge3 4 ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPG 83 (125)
T ss_dssp CBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCE
T ss_pred CCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCE
Confidence 45566666667999999998654322 23444533 22110 00 000000 000000012334556
Q ss_pred EEeCCCCCCCEEEEEecc
Q 013955 104 TVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~ 121 (433)
..|+||+|+|.|.++|..
T Consensus 84 ~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 84 WLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp EEECSCCSSCBCCBEEEE
T ss_pred EEECCCccCCEEEEEEEE
Confidence 789999999999999964
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.63 E-value=0.06 Score=39.23 Aligned_cols=68 Identities=15% Similarity=0.257 Sum_probs=36.6
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
|.-|+++. +.+++.|.|..+.... .-.|+|......-....... ......+.|.+|+|++.|.+
T Consensus 8 Pp~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----------~~~~~~~~l~~L~p~t~Y~~ 76 (100)
T d2gysa4 8 PPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET----------LQNAHSMALPALEPSTRYWA 76 (100)
T ss_dssp CCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE----------EESCSEEECCCCCSSCCCEE
T ss_pred CCccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc----------cCCceEEEeCCCCCCCeEEE
Confidence 44566663 3578999998775422 24566765433211111100 01123577899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 77 rVRa 80 (100)
T d2gysa4 77 RVRV 80 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9954
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.25 E-value=0.06 Score=40.71 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=45.7
Q ss_pred CCCCCCceEEEEe-cCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 38 KPSSHPQQVHISL-AGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 38 ~~~~~p~qv~l~~-~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
.+...|..|.+.. .+++++.|+|.-... .....+.|....+.... ..- . ........++|+||+
T Consensus 9 ~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~-~~~-----~---~~~~~~~~~~i~~L~ 79 (117)
T d2cspa1 9 GPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV-AEV-----I---FPTADSTAVELVRLR 79 (117)
T ss_dssp CCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEE-EEE-----C---CTTCSEEEEESHHHH
T ss_pred CCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccc-eee-----e---eeccceeeeeccCCC
Confidence 4566888887754 346799999985421 12335667654321111 000 0 122334567899999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.+||..
T Consensus 80 ~~t~Y~v~V~A 90 (117)
T d2cspa1 80 SLEAKGVTVRT 90 (117)
T ss_dssp HHTCSCBEEEE
T ss_pred CCcEEEEEEEE
Confidence 99999999964
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.57 E-value=0.23 Score=44.61 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=40.3
Q ss_pred eEEEEEecCCCCCChHHHHHHhhc--CCC--ceEEccccccccccchhhHHHhhhhh-hhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGWTKSTLDHIGQ--CKY--DVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~l~~i~~--~~p--d~vl~~GD~~~~~~~~~~w~~~~~~~-~~l~~~iP~~~v~GNHD~~ 208 (433)
-.+.++||+|.. ...+++-++. ..+ .-.|++||+++.+.. ..+.+.-++ -.+.-.--++.+.||||..
T Consensus 60 ~pv~VvGDiHGq--~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~~--slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 60 EKITVCGDTHGQ--FYDLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp CEEEEECCCTTC--HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCEEEEEECCCC--HHHHHHHHHHCCCCCCCCeEEEecccccCcCc--ceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 367899999855 3444444331 222 248999999987653 333322111 1122224589999999984
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=90.24 E-value=0.19 Score=44.60 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=39.1
Q ss_pred EEEEecCCCCCChHHHHH---HhhcCCCceEEccccccccccchhhHHHhhhhhh-hhhhCCCceeccCCCcCC
Q 013955 139 FAVAGDLGQTGWTKSTLD---HIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQ-PLASARPWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~~~~~~l~---~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~-~l~~~iP~~~v~GNHD~~ 208 (433)
+.++||+|.. ...+++ ......-.-.|++||.++.+.. ..+.+.-++. .+...--++...||||..
T Consensus 54 v~VvGDiHG~--~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQ--YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTC--HHHHHHHHHHHCCTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCC--hHhHHHHHhhcCCCccceEEeeccccCCCcc--chHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 7899999754 333333 3223333458999999987654 3333222111 122224589999999984
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.24 E-value=0.16 Score=44.96 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=38.4
Q ss_pred EEEEecCCCCCChHHHHHHh---hcCCCceEEccccccccccchhhHHHhhhhh-hhhhhCCCceeccCCCcCC
Q 013955 139 FAVAGDLGQTGWTKSTLDHI---GQCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~~~~~~l~~i---~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~-~~l~~~iP~~~v~GNHD~~ 208 (433)
+.++||+|.. ...++.-+ ....-.-.|++||+++.+.. ..+.+.-++ -.+...--++.+.||||..
T Consensus 47 v~VvGDlHG~--~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQ--FHDLMELFRIGGKSPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTC--HHHHHHHHHHHCCTTTSCEEECSCCCCSSSS--HHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCC--HHHHHHHHHhcCCCccceEEecCcccCCCCc--ceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 8899999754 33333332 22223458999999987654 222221111 1122224589999999974
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.94 E-value=0.3 Score=34.98 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=36.1
Q ss_pred CCCceEEEEecC-CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 41 SHPQQVHISLAG-DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 41 ~~p~qv~l~~~~-~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
..|..|.|.... ++.+.|.|..+.... .-.|+|............. .... +..|.|
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~----------~~~t-----~~~L~p 67 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVF----------TDKT-----SATVIC 67 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEE----------ESSS-----EEEECC
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecc----------ccce-----EEEecC
Confidence 478889888765 678999999875322 1255665543221111111 0111 125889
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.+||..
T Consensus 68 ~~~Y~v~VRa 77 (94)
T d3d85d3 68 RKNASISVRA 77 (94)
T ss_dssp CSSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999999965
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.48 E-value=0.24 Score=46.65 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=37.5
Q ss_pred EEEEecCCCCCChHHHHHHhh---cCCCceEEccccccccccchhhHHHhhhhh-hhhhhCCCceeccCCCcCC
Q 013955 139 FAVAGDLGQTGWTKSTLDHIG---QCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 139 f~~~gD~~~~~~~~~~l~~i~---~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~-~~l~~~iP~~~v~GNHD~~ 208 (433)
+.++||+|.. ...+++-+. ...-.-.|++||+++.+... .+.+.-++ -.+...--++.+.||||..
T Consensus 72 v~VvGDIHGq--~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~S--lEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQ--FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFS--IECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTC--HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCH--HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred EEEEEeCCCC--HHHHHHHHHHcCCCCcceEEecCccccCCccc--HHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 7899999855 333333222 22223478999999877542 22211111 1122224589999999963
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.37 E-value=1.1 Score=31.72 Aligned_cols=71 Identities=14% Similarity=-0.024 Sum_probs=40.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCCcE--EEEeccCCCCC-eeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSPSV--VEYGTSPGGYN-CGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~~~--v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
.|..|++... ...+++.|.-+....... +++........ ...... ..........+.+|.+++.|++|
T Consensus 3 ~P~nv~v~s~-n~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~Y~fR 73 (98)
T d1fyhb1 3 TPTNVTIESY-NMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI--------NISHHYCNISDHVGDPSNSLWVR 73 (98)
T ss_dssp CCEEEEEECB-SSCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE--------EESSSEEECGGGCCSTTSCEEEE
T ss_pred cCCceEEEEe-CCcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee--------ecccceeeeEecccCCCCEEEEE
Confidence 4777877643 445679999765433332 33333222111 111111 12234455678899999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~A 76 (98)
T d1fyhb1 74 VKA 76 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.60 E-value=0.4 Score=38.11 Aligned_cols=32 Identities=25% Similarity=0.151 Sum_probs=24.2
Q ss_pred EEEEEeCCCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 101 IHHTVIGPLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 101 ~~~v~l~~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
....+|+||+|+|.|.++|.. .+....+||.|
T Consensus 154 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 154 KESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp CSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred eEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 345789999999999999964 13456778766
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.33 E-value=2.2 Score=31.18 Aligned_cols=17 Identities=12% Similarity=-0.060 Sum_probs=14.2
Q ss_pred EeCCCCCCCEEEEEecc
Q 013955 105 VIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~ 121 (433)
.+.+|+|++.|.+||..
T Consensus 75 ~~~~L~p~t~Y~~~V~A 91 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKA 91 (117)
T ss_dssp EEEECCCSSCEEEEEEE
T ss_pred EEeeccCCcEEEEEEEE
Confidence 34589999999999964
|