Citrus Sinensis ID: 014004
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| 359486223 | 413 | PREDICTED: uncharacterized protein LOC10 | 0.851 | 0.891 | 0.665 | 1e-145 | |
| 255575938 | 370 | conserved hypothetical protein [Ricinus | 0.773 | 0.902 | 0.710 | 1e-142 | |
| 240255999 | 389 | uncharacterized protein [Arabidopsis tha | 0.800 | 0.889 | 0.648 | 1e-137 | |
| 356560121 | 385 | PREDICTED: uncharacterized protein LOC10 | 0.800 | 0.898 | 0.66 | 1e-136 | |
| 356541848 | 387 | PREDICTED: uncharacterized protein LOC10 | 0.793 | 0.886 | 0.667 | 1e-134 | |
| 92893672 | 355 | Protein of unknown function DUF707 [Medi | 0.768 | 0.935 | 0.683 | 1e-134 | |
| 357445211 | 406 | hypothetical protein MTR_2g005330 [Medic | 0.789 | 0.839 | 0.644 | 1e-131 | |
| 357445209 | 368 | hypothetical protein MTR_2g005330 [Medic | 0.768 | 0.902 | 0.658 | 1e-131 | |
| 449515369 | 402 | PREDICTED: uncharacterized LOC101205845, | 0.745 | 0.800 | 0.658 | 1e-128 | |
| 297735287 | 413 | unnamed protein product [Vitis vinifera] | 0.844 | 0.883 | 0.602 | 1e-128 |
| >gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/377 (66%), Positives = 291/377 (77%), Gaps = 9/377 (2%)
Query: 2 MKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLV------ 55
MKT + IS+ SDP SRS LCSLFI A L C VYFI S F K+ K+R RW +
Sbjct: 1 MKTLSCISLPSDPKSRSYLCSLFIGACLFCGVYFIASEFTVKDYKDRSSRWQISVFQNAH 60
Query: 56 -HSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAI 114
+S+ + + CKNQ CR G+EALPEGIV KTSNLE++PLW + P +LLA+
Sbjct: 61 SNSIQNTQSSKCKNQ-CRPSGSEALPEGIVVKTSNLEVQPLWGATLNGEKSSPSKSLLAM 119
Query: 115 AAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAK 174
A GIKQK+IV+QIV KF +FVVMLFHYDGVVDEW++ W+D AIHV+ NQTKWWFAK
Sbjct: 120 AVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWREFAWSDHAIHVTVVNQTKWWFAK 179
Query: 175 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITA 234
RFLHPDIVAEYNYIFLWDED+GVENF+P RY+SIV+DEGLEISQPALDP KS VHH ITA
Sbjct: 180 RFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVEDEGLEISQPALDPKKSRVHHQITA 239
Query: 235 RRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW 294
R RNS+ HRR YK++GSGRCDD STAPPC+GWVEMMAPVFS+AAWRC W+MIQN+LIHAW
Sbjct: 240 RVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMAPVFSKAAWRCVWHMIQNELIHAW 299
Query: 295 GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDL-EQIANPV 353
G+D+QLGYCAQGDRTKNVGVVDSEY+VHL LPTLGV E EL G L E++ V
Sbjct: 300 GVDMQLGYCAQGDRTKNVGVVDSEYVVHLALPTLGVLDENELRGEGHDHSSLREKLPKSV 359
Query: 354 ALAPSQSRRYDNRPEVR 370
ALA S+ + DNR VR
Sbjct: 360 ALAQSEFHKVDNRSAVR 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|92893672|gb|ABE91850.1| Protein of unknown function DUF707 [Medicago truncatula] gi|92893916|gb|ABE91966.1| Protein of unknown function DUF707 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357445209|ref|XP_003592882.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481930|gb|AES63133.1| hypothetical protein MTR_2g005330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449515369|ref|XP_004164722.1| PREDICTED: uncharacterized LOC101205845, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297735287|emb|CBI17649.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| TAIR|locus:2124608 | 389 | AT4G18530 "AT4G18530" [Arabido | 0.800 | 0.889 | 0.648 | 1.6e-127 | |
| TAIR|locus:2202124 | 438 | AT1G11170 [Arabidopsis thalian | 0.594 | 0.586 | 0.606 | 1.1e-87 | |
| TAIR|locus:2008425 | 425 | AT1G61240 [Arabidopsis thalian | 0.599 | 0.609 | 0.593 | 3.3e-86 | |
| TAIR|locus:2031905 | 401 | AT1G13000 [Arabidopsis thalian | 0.599 | 0.645 | 0.496 | 5.6e-68 | |
| TAIR|locus:2086721 | 398 | AT3G27470 "AT3G27470" [Arabido | 0.583 | 0.633 | 0.494 | 2.4e-67 | |
| TAIR|locus:2205140 | 382 | AT1G08040 [Arabidopsis thalian | 0.587 | 0.664 | 0.486 | 3.6e-66 | |
| TAIR|locus:2057557 | 374 | AT2G28310 "AT2G28310" [Arabido | 0.574 | 0.663 | 0.482 | 5.2e-65 | |
| TAIR|locus:2008640 | 404 | AT1G67850 "AT1G67850" [Arabido | 0.574 | 0.613 | 0.490 | 6.7e-65 | |
| TAIR|locus:2079291 | 396 | AT3G26440 [Arabidopsis thalian | 0.576 | 0.628 | 0.490 | 1.4e-64 | |
| TAIR|locus:504956279 | 381 | AT1G24570 [Arabidopsis thalian | 0.571 | 0.648 | 0.484 | 2.3e-64 |
| TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 236/364 (64%), Positives = 281/364 (77%)
Query: 16 SRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPE--------TCK 67
+RSCLCS+ I ALIC YFI ++++AK+ KE+L++W + M+++ + TCK
Sbjct: 7 NRSCLCSVLITTALICGAYFICNAYLAKDFKEKLLKWEITDKMHNSTDKMQNATTTSTCK 66
Query: 68 NQQCRLPGTEALPEGIVSKTSNLEMRPLWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQ 126
N + GTEALP+GI+ KTSNLE + LW+ +K M+LLA+A GIKQK++V++
Sbjct: 67 NFN-KPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNK 125
Query: 127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
+++KFP +DF VMLFHYDGVVD+WK W + AIHVS NQTKWWFAKRFLHPDIVAEY
Sbjct: 126 VIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYE 185
Query: 187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD KSEVHHPITARR+ SK HRRMY
Sbjct: 186 YIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMY 245
Query: 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQG 306
KYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQG
Sbjct: 246 KYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQG 305
Query: 307 DRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNR 366
DR KNVGVVD+EYI+H GLPTLGV V AS L + + +SR DNR
Sbjct: 306 DRKKNVGVVDAEYIIHYGLPTLGV--------VETASSALRNETDSKSTESLESREVDNR 357
Query: 367 PEVR 370
PEVR
Sbjct: 358 PEVR 361
|
|
| TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00035311001 | SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (411 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| pfam05212 | 294 | pfam05212, DUF707, Protein of unknown function (DU | 1e-137 | |
| COG5096 | 757 | COG5096, COG5096, Vesicle coat complex, various su | 0.004 |
| >gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707) | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-137
Identities = 137/266 (51%), Positives = 170/266 (63%), Gaps = 6/266 (2%)
Query: 70 QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVR 129
G E LP GIV S+ +R LW SP + + P LLA G QK VD V+
Sbjct: 4 PTNPRGAERLPPGIVVSESDFYLRRLWGSPEE-DVASKPKYLLAFTVGYSQKANVDACVK 62
Query: 130 KFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIF 189
KF S +F ++LFHYDG EW +L W+ +AIHVSA QTKWWFAKRFLHPDIVA Y YIF
Sbjct: 63 KF-SDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIF 121
Query: 190 LWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYK 249
LWDED+GV+NF+ Y+ IVK GLEISQP LDP + ++ IT RR + + H+ +
Sbjct: 122 LWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKG 181
Query: 250 GSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRT 309
ST PPC G+VE+MAPVFSR AWRC W+MIQNDL+H WGLD L C
Sbjct: 182 RCCD---NSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAH 237
Query: 310 KNVGVVDSEYIVHLGLPTLGVTTEPE 335
+ +GVVDS+++VH G+P+LG E
Sbjct: 238 EKIGVVDSQWVVHQGIPSLGSQGTAE 263
|
This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294 |
| >gnl|CDD|227427 COG5096, COG5096, Vesicle coat complex, various subunits [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| PF05212 | 294 | DUF707: Protein of unknown function (DUF707); Inte | 100.0 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 94.28 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 93.77 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 93.66 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 91.68 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 89.0 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 87.01 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 84.7 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 81.55 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 80.25 |
| >PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-121 Score=890.87 Aligned_cols=278 Identities=63% Similarity=1.121 Sum_probs=268.1
Q ss_pred cCCCCCCCCCCCCccccCCCcceecCCCCCCCCCCCCCCCcEEEEEeccccccchhHHhhcCCCCCcEEEEEEecCccCc
Q 014004 70 QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE 149 (432)
Q Consensus 70 q~~p~g~e~LP~gIv~~~Sdl~lr~Lwg~p~~~~~~~~~k~Lla~~VG~kqk~~Vd~~VkKf~~~nFdvmLFHYDG~vd~ 149 (432)
||+|+|+|+||+|||+++||||||||||.|+++. +.++|||||||||+|||++||++|+|| ++|||||||||||+||+
T Consensus 4 ~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~-~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~ 81 (294)
T PF05212_consen 4 PCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL-PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDE 81 (294)
T ss_pred CCCCCccccCCCCccccCCCceeeecCCCccccc-cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCc
Confidence 8999999999999999999999999999999885 668899999999999999999999999 89999999999999999
Q ss_pred cccccccCceeEEEeecccchhhhccccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCCCCCCccc
Q 014004 150 WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH 229 (432)
Q Consensus 150 W~d~eWs~~aiHVsa~kQtKWwfaKRFLHPDiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~is 229 (432)
|+|||||++||||++.|||||||||||||||+|++|||||||||||+||+|+|+|||+||++|||||||||||++++++|
T Consensus 82 w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~ 161 (294)
T PF05212_consen 82 WDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIH 161 (294)
T ss_pred hhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred ccccccccCcccceeeecccCCCCCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccchhhhhhhhhhcCCCC
Q 014004 230 HPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRT 309 (432)
Q Consensus 230 H~iT~R~~~~~vHrr~~~~~g~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWGLDf~w~~caqg~~~ 309 (432)
|+||+|++.++|||. .++.+.|.+++++||||||||||||||||+|||||||||||||+|||||||+|+||+ ++++
T Consensus 162 ~~iT~R~~~~~vhr~---~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~ 237 (294)
T PF05212_consen 162 HPITKRRPDSEVHRK---TRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRH 237 (294)
T ss_pred eeEEeecCCceeEec---cCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-cccc
Confidence 999999999999984 577788888999999999999999999999999999999999999999999999999 6899
Q ss_pred CcEEEEeeeeEEEeccccCCCCCCcccc-----cccccchhHHHhcCcC
Q 014004 310 KNVGVVDSEYIVHLGLPTLGVTTEPELN-----TVGQASDDLEQIANPV 353 (432)
Q Consensus 310 ~kIGVVDa~~VvH~g~PtLGg~g~~~~~-----~~~~~s~~~~~~~~~~ 353 (432)
+||||||||||+|+|+|||||||.+++. .||++|+.|+++|+-+
T Consensus 238 ~kiGVVDs~~VvH~gvptLG~~~~~~~~~~~~~~Vr~r~~~E~~~F~~R 286 (294)
T PF05212_consen 238 KKIGVVDSQYVVHTGVPTLGGQGNSEKGKDPREEVRRRSFAEMRIFQKR 286 (294)
T ss_pred ccEEEEeeEEEEEcCCCcCCCccccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887554 6999999999999865
|
|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 6e-05
Identities = 40/284 (14%), Positives = 77/284 (27%), Gaps = 87/284 (30%)
Query: 12 SDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQC 71
D P + S+ I S ++ W H ++
Sbjct: 316 QDLPREVLTTNP-----RRLSI--IAESI--RDGLATWDNW--KHVNCDKLTTIIESSLN 364
Query: 72 RLPGTEA---------LPEG--IVSKTSNLEMRPLWSSPSK--------------LNNQR 106
L E P I + L + +W K L ++
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTIL--LSL--IWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 107 PPMNLLAI----------AAGIKQ--KKIVDQ--IVRKFPSKDFVVM-----LFHYDG-- 145
P + ++I + IVD I + F S D + + + G
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480
Query: 146 -----VVDEWK-------DLVWADRAI-HVSAANQTKWWFAKRFLHPDI--VAEY-NYIF 189
+ D + ++ I H S A W A + + + Y YI
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA-----WNASGSILNTLQQLKFYKPYIC 535
Query: 190 LWDED-----IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEV 228
D + +F P+ +++ + ++ + AL +
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 84.16 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 82.61 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 80.7 |
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
Probab=84.16 E-value=1.9 Score=37.58 Aligned_cols=119 Identities=8% Similarity=-0.073 Sum_probs=67.8
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCC-----CCCCCcccccccccccCcccceeeecccCCCCCCC
Q 014004 183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD 256 (432)
Q Consensus 183 a~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~isH~iT~R~~~~~vHrr~~~~~g~~~C~~ 256 (432)
+..|||++.|+|..++...++++++.+++. +..+..+.. +.+ +...+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~----------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVT----------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHH----------H---
Confidence 688999999999999998899999999876 666665543 221 1111110 0 0000000 0
Q ss_pred CCCCCCccceEEeecccccHHHHHHhh-hh--hcC-CCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEec
Q 014004 257 YSTAPPCIGWVEMMAPVFSRAAWRCAW-YM--IQN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 324 (432)
Q Consensus 257 ~~~~ppcTgFVEiMAPVFSR~AwrCvw-hm--iQN-DLvhGWGLDf~w~~caqg~~~~kIGVVDa~~VvH~g 324 (432)
....++-..+=+|+|++++.+- .+ ..+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0111222234578999998763 11 011 222335567776544432 23 69999998888873
|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 84.87 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.87 E-value=0.55 Score=40.99 Aligned_cols=143 Identities=14% Similarity=0.069 Sum_probs=74.9
Q ss_pred cccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCCCCCCc-cc----ccccccccCcccce--eeecccCCCCC
Q 014004 182 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE-VH----HPITARRRNSKAHR--RMYKYKGSGRC 254 (432)
Q Consensus 182 Va~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~-is----H~iT~R~~~~~vHr--r~~~~~g~~~C 254 (432)
.+.-|||++.|+|..++.-.++++++.+.+..-.+..|.++.-... .. ...+.-.-....+. ..+........
T Consensus 105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (328)
T d1xhba2 105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR 184 (328)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence 4778999999999999999999999999998877777765321100 00 00000000000000 00000000000
Q ss_pred CCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccch---hhhhhhhhhcCCCCCcEEEEeeeeEEEeccccCC
Q 014004 255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 329 (432)
Q Consensus 255 ~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWG---LDf~w~~caqg~~~~kIGVVDa~~VvH~g~PtLG 329 (432)
....+.|..+.++..-+=.++|++|..+= -++.....|| +|+-+.-... +.+|..+-...|.|..+-..+
T Consensus 185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vG--gfDe~~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~~~~~~ 257 (328)
T d1xhba2 185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKATP 257 (328)
T ss_dssp TTCTTSCEECSBCCSSSEEEEHHHHHHTT--SCCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC-----
T ss_pred ccccccccccceecceeeeeeHHHHHHhC--CCCCCCcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeCCCCCC
Confidence 11112222223333222346899999873 2456566675 4555544433 468999988889997554443
|