Citrus Sinensis ID: 014036

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--
MEAVTVPESSPSPMSLQQPKTPPPEASPKPYTSNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSSLV
cccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccEEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHHcccccccccccEEEEccccccHHHHHccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEccccEEEEEEEEcccccEEEEEEEccccccEEEEEcccccccccccccccEEEcccccEEEEEEEccccccccEEEEEEEEcccccc
ccccEccccccccccccccccccccccccccccccccccccHHHHcccccccHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHcccccccccEEEEEccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccHHHHHHEEEEEcccHHHHHHHHHccccccccccEEEEEcccccHHHHHHHccHHHccHHccccccccccccccccccEEEEEcccccEEEEEEEEccccEEEEEEEEcccEEEEEEEEEccccccEEEEEEccEEEccccccccccEEEccccEEEEEEEcccccccEEEEEEEEEcccccc
meavtvpesspspmslqqpktpppeaspkpytsnKKSFVASLMEAatlrspsfkedsyFVSQLKSSEKKALQELKNRLAdshngsgenecsmwgipllgtgdERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEfgadgiveedlgfKELEGVVAYMQgydreghpvcynaygvfrdkdmyerifgdDEKLKKFLRWRVQVLERGINllhfkpggvnsiiqvtdlkdmpkreLRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSmfspfltqrtksKFVISKEGNVAETLYkfvrpedipvqygglsrpsdlnhgppkpaseftvkggekVNIQIEGIEAGATITWDIVVGGwdleysaefvpnaegsytiavekprkispseeairnsftskeAGKLVLSvdnsssrrRKVAAYRYIVRKSSLV
meavtvpesspspmslqqpktpppeaspkPYTSNKKSFVASLMEAATlrspsfkedSYFVSQLKSSEKKALQELKNRLAdshngsgeneCSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGinllhfkpggvnsiIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLsrpsdlnhgpPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIavekprkispseeairnsftskeagklvlsvdnsssrrrkvaayryivrksslv
MEAVTVPESSPSPMSLQQpktpppeaspkpytsNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSSLV
*****************************************************************************************CSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYG**********************GGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAV***************************************AAYRYIV******
**********************************************************************LQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINL****PGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEF***********************AIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSSL*
********************************SNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSSLV
********************************************************SYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRK****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEAVTVPESSPSPMSLQQPKTPPPEASPKPYTSNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSSLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query432 2.2.26 [Sep-21-2011]
Q9SCU1409 Patellin-6 OS=Arabidopsis yes no 0.937 0.990 0.732 0.0
Q56Z59490 Patellin-3 OS=Arabidopsis no no 0.902 0.795 0.475 1e-100
Q9M0R2668 Patellin-5 OS=Arabidopsis no no 0.844 0.546 0.470 6e-96
Q94C59540 Patellin-4 OS=Arabidopsis no no 0.793 0.635 0.457 1e-87
Q56ZI2683 Patellin-2 OS=Arabidopsis no no 0.740 0.468 0.436 1e-74
Q56WK6573 Patellin-1 OS=Arabidopsis no no 0.745 0.561 0.408 3e-68
Q6C9R9362 Phosphatidylinositol tran yes no 0.553 0.660 0.340 3e-29
A5DEQ9336 Phosphatidylinositol tran N/A no 0.594 0.764 0.279 3e-22
Q2UA18455 Phosphatidylinositol tran yes no 0.557 0.529 0.296 1e-20
Q1DSY1457 Phosphatidylinositol tran N/A no 0.574 0.542 0.280 3e-20
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 Back     alignment and function desciption
 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/423 (73%), Positives = 363/423 (85%), Gaps = 18/423 (4%)

Query: 8   ESSPSPMSLQQPKTPPPEASPKPYTSNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSE 67
           ++S SP   Q+ +   P          KKSF+ SL+   TLRS + KED+YFVS+LK +E
Sbjct: 2   DASLSPFDHQKTQNTEP----------KKSFITSLI---TLRSNNIKEDTYFVSELKPTE 48

Query: 68  KKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNML 127
           +K+LQELK +L+ S + +     SMWG+ LLG GD++ADVILLKFLRARDF+V DS  ML
Sbjct: 49  QKSLQELKEKLSASSSKA----SSMWGVSLLG-GDDKADVILLKFLRARDFKVADSLRML 103

Query: 128 EKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIF 187
           EKCL WR+EF A+ + EEDLGFK+LEG VAYM+GYD+EGHPVCYNAYGVF++K+MYER+F
Sbjct: 104 EKCLEWREEFKAEKLTEEDLGFKDLEGKVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVF 163

Query: 188 GDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQ 247
           GD+EKL KFLRWRVQVLERG+ +LHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQ
Sbjct: 164 GDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQ 223

Query: 248 DNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIP 307
           DNYPE+VA KIFINVPWYFS++YSMFSPFLTQRTKSKFV+SKEGN AETLYKF+RPEDIP
Sbjct: 224 DNYPELVATKIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIP 283

Query: 308 VQYGGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAE 367
           VQYGGLSRP+D  +GPPKPASEF++KGGEKVNIQIEGIE GATITWDIVVGGWDLEYSAE
Sbjct: 284 VQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAE 343

Query: 368 FVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVR 427
           FVPNAE SY I VEKP+K+  ++EA+ NSFT+ EAGKL+LSVDN+ SR++KVAAYRY VR
Sbjct: 344 FVPNAEESYAIVVEKPKKMKATDEAVCNSFTTVEAGKLILSVDNTLSRKKKVAAYRYTVR 403

Query: 428 KSS 430
           KS+
Sbjct: 404 KST 406
Carrier protein that may be involved in membrane-trafficking events associated with cell-plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites.
Arabidopsis thaliana (taxid: 3702)
>sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 Back     alignment and function description
>sp|Q9M0R2|PATL5_ARATH Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 Back     alignment and function description
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 Back     alignment and function description
>sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2 Back     alignment and function description
>sp|Q56WK6|PATL1_ARATH Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2 Back     alignment and function description
>sp|Q6C9R9|SFH5_YARLI Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SFH5 PE=3 SV=1 Back     alignment and function description
>sp|A5DEQ9|SFH5_PICGU Phosphatidylinositol transfer protein SFH5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=SFH5 PE=3 SV=2 Back     alignment and function description
>sp|Q2UA18|SFH5_ASPOR Phosphatidylinositol transfer protein sfh5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=sfh5 PE=3 SV=1 Back     alignment and function description
>sp|Q1DSY1|SFH5_COCIM Phosphatidylinositol transfer protein SFH5 OS=Coccidioides immitis (strain RS) GN=SFH5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query432
225439560417 PREDICTED: patellin-6 [Vitis vinifera] 0.953 0.988 0.867 0.0
255571491423 Patellin-6, putative [Ricinus communis] 0.979 1.0 0.833 0.0
449461741413 PREDICTED: patellin-6-like [Cucumis sati 0.944 0.987 0.832 0.0
325516276424 Sec14-like protein [Solanum pennellii] 0.962 0.981 0.829 0.0
224139274389 predicted protein [Populus trichocarpa] 0.898 0.997 0.863 0.0
356495079421 PREDICTED: patellin-6-like [Glycine max] 0.962 0.988 0.813 0.0
356506815421 PREDICTED: patellin-6-like [Glycine max] 0.960 0.985 0.808 0.0
297735603429 unnamed protein product [Vitis vinifera] 0.907 0.913 0.822 0.0
357506245436 Patellin-6 [Medicago truncatula] gi|3554 0.916 0.908 0.781 0.0
356566732 634 PREDICTED: patellin-6-like [Glycine max] 0.946 0.645 0.766 0.0
>gi|225439560|ref|XP_002264479.1| PREDICTED: patellin-6 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  752 bits (1942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/422 (86%), Positives = 392/422 (92%), Gaps = 10/422 (2%)

Query: 12  SPMSLQQ-PKTPPPEASPKPYTSNKKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKA 70
           SP+S+QQ P+   PEASPKP+   +K FV SLMEAATLRSPSFKED+YFVS+LKSSEKKA
Sbjct: 5   SPISMQQTPQKDQPEASPKPF---RKRFVTSLMEAATLRSPSFKEDTYFVSRLKSSEKKA 61

Query: 71  LQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKC 130
           LQE K++L  SH        SMWGIPLLG GDERADVILLKFLRARDFRV DSFNMLEKC
Sbjct: 62  LQEFKDKLVASHGSD-----SMWGIPLLG-GDERADVILLKFLRARDFRVADSFNMLEKC 115

Query: 131 LAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDD 190
           LAWRKEFGAD + EEDLGFKELEGVVAYM GYDRE HPVCYNAYGVFRDKDMYERIFGD+
Sbjct: 116 LAWRKEFGADDVAEEDLGFKELEGVVAYMHGYDREEHPVCYNAYGVFRDKDMYERIFGDE 175

Query: 191 EKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNY 250
           EKLKKFLRWRVQVLERGI LLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNY
Sbjct: 176 EKLKKFLRWRVQVLERGIKLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNY 235

Query: 251 PEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQY 310
           PEMVARKIFINVPWYFS+LYSMFSPFLTQRTKSKFVISKEGNVAETLYKF+RPED+PVQY
Sbjct: 236 PEMVARKIFINVPWYFSILYSMFSPFLTQRTKSKFVISKEGNVAETLYKFIRPEDVPVQY 295

Query: 311 GGLSRPSDLNHGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVP 370
           GGLSRPSDL +GPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVP
Sbjct: 296 GGLSRPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVP 355

Query: 371 NAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 430
           NAEGSYTIAVEKPRK++PSEEA+ NSF S+EAG+LVLSVDN++SRR+KVAAYRY+VRKS+
Sbjct: 356 NAEGSYTIAVEKPRKMAPSEEAVHNSFMSREAGRLVLSVDNTASRRKKVAAYRYVVRKST 415

Query: 431 LV 432
           +V
Sbjct: 416 VV 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255571491|ref|XP_002526693.1| Patellin-6, putative [Ricinus communis] gi|223533993|gb|EEF35715.1| Patellin-6, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449461741|ref|XP_004148600.1| PREDICTED: patellin-6-like [Cucumis sativus] gi|449529624|ref|XP_004171798.1| PREDICTED: patellin-6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|325516276|gb|ADZ24716.1| Sec14-like protein [Solanum pennellii] Back     alignment and taxonomy information
>gi|224139274|ref|XP_002323032.1| predicted protein [Populus trichocarpa] gi|222867662|gb|EEF04793.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356495079|ref|XP_003516408.1| PREDICTED: patellin-6-like [Glycine max] Back     alignment and taxonomy information
>gi|356506815|ref|XP_003522171.1| PREDICTED: patellin-6-like [Glycine max] Back     alignment and taxonomy information
>gi|297735603|emb|CBI18097.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357506245|ref|XP_003623411.1| Patellin-6 [Medicago truncatula] gi|355498426|gb|AES79629.1| Patellin-6 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356566732|ref|XP_003551583.1| PREDICTED: patellin-6-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query432
TAIR|locus:2098282409 AT3G51670 "AT3G51670" [Arabido 0.898 0.948 0.770 4.2e-166
TAIR|locus:2207016490 AT1G72160 "AT1G72160" [Arabido 0.856 0.755 0.496 2.1e-93
TAIR|locus:2204594540 AT1G30690 [Arabidopsis thalian 0.828 0.662 0.447 4.4e-90
TAIR|locus:2141563668 AT4G09160 "AT4G09160" [Arabido 0.935 0.604 0.441 3.2e-88
TAIR|locus:2009502683 PATL2 "PATELLIN 2" [Arabidopsi 0.75 0.474 0.438 4.1e-77
TAIR|locus:2207001573 PATL1 "AT1G72150" [Arabidopsis 0.75 0.565 0.409 1.2e-65
DICTYBASE|DDB_G0270022444 DDB_G0270022 "cellular retinal 0.620 0.603 0.352 1.7e-34
CGD|CAL0005528320 orf19.4897 [Candida albicans ( 0.458 0.618 0.328 2.5e-21
SGD|S000003681294 SFH5 "Non-classical phosphatid 0.476 0.700 0.273 1.6e-19
ZFIN|ZDB-GENE-060526-180395 si:ch211-89f7.1 "si:ch211-89f7 0.516 0.564 0.314 3.3e-19
TAIR|locus:2098282 AT3G51670 "AT3G51670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
 Identities = 305/396 (77%), Positives = 352/396 (88%)

Query:    35 KKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWG 94
             KKSF+ SL+   TLRS + KED+YFVS+LK +E+K+LQELK +L+     S     SMWG
Sbjct:    19 KKSFITSLI---TLRSNNIKEDTYFVSELKPTEQKSLQELKEKLS----ASSSKASSMWG 71

Query:    95 IPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEG 154
             + LLG GD++ADVILLKFLRARDF+V DS  MLEKCL WR+EF A+ + EEDLGFK+LEG
Sbjct:    72 VSLLG-GDDKADVILLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEG 130

Query:   155 VVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFK 214
              VAYM+GYD+EGHPVCYNAYGVF++K+MYER+FGD+EKL KFLRWRVQVLERG+ +LHFK
Sbjct:   131 KVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFK 190

Query:   215 PGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFS 274
             PGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPE+VA KIFINVPWYFS++YSMFS
Sbjct:   191 PGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFS 250

Query:   275 PFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNHGPPKPASEFTVKG 334
             PFLTQRTKSKFV+SKEGN AETLYKF+RPEDIPVQYGGLSRP+D  +GPPKPASEF++KG
Sbjct:   251 PFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKG 310

Query:   335 GEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIR 394
             GEKVNIQIEGIE GATITWDIVVGGWDLEYSAEFVPNAE SY I VEKP+K+  ++EA+ 
Sbjct:   311 GEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDEAVC 370

Query:   395 NSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 430
             NSFT+ EAGKL+LSVDN+ SR++KVAAYRY VRKS+
Sbjct:   371 NSFTTVEAGKLILSVDNTLSRKKKVAAYRYTVRKST 406
GO:0005215 "transporter activity" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2207016 AT1G72160 "AT1G72160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204594 AT1G30690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141563 AT4G09160 "AT4G09160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009502 PATL2 "PATELLIN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207001 PATL1 "AT1G72150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270022 DDB_G0270022 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0005528 orf19.4897 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000003681 SFH5 "Non-classical phosphatidylinositol transfer protein (PITP)" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060526-180 si:ch211-89f7.1 "si:ch211-89f7.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SCU1PATL6_ARATHNo assigned EC number0.73280.93750.9902yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00037411001
SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (417 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00034704001
SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (916 aa)
      • 0.480
GSVIVG00031783001
RecName- Full=Histone H3; (136 aa)
      • 0.480
GSVIVG00020962001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (149 aa)
      • 0.480
GSVIVG00018517001
RecName- Full=Histone H4; (103 aa)
      • 0.480
GSVIVG00018516001
RecName- Full=Histone H4; (103 aa)
      • 0.480
GSVIVG00008852001
RecName- Full=Histone H3; (136 aa)
      • 0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
smart00516158 smart00516, SEC14, Domain in homologues of a S 8e-38
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 2e-34
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 2e-29
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 4e-05
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 4e-05
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 5e-04
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information 
 Score =  134 bits (339), Expect = 8e-38
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 15/166 (9%)

Query: 151 ELEGVVAYM---QGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERG 207
           ELE + AY+   +GYD++G PV     G         R       L++ LR+ V VLE+ 
Sbjct: 1   ELELLKAYIPGGRGYDKDGRPVLIERAG---------RFDLKSVTLEELLRYLVYVLEKI 51

Query: 208 INLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQ-ILSLFQDNYPEMVARKIFINVPWYF 266
           +     K GG+     + DLK +      ++  + IL + QD+YPE + +   IN PW+F
Sbjct: 52  L-QEEKKTGGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFF 110

Query: 267 SMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGG 312
            +L+ +  PFL ++T+ K       +  E L +++  E +P + GG
Sbjct: 111 RVLWKIIKPFLDEKTREKIRFVG-NDSKEELLEYIDKEQLPEELGG 155

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 432
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.94
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.91
PF13897136 GOLD_2: Golgi-dynamics membrane-trafficking 99.9
KOG3878469 consensus Protein involved in maintenance of Golgi 99.6
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.36
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.81
KOG4406 467 consensus CDC42 Rho GTPase-activating protein [Sig 98.1
KOG3287 236 consensus Membrane trafficking protein, emp24/gp25 97.3
KOG1693209 consensus emp24/gp25L/p24 family of membrane traff 95.39
KOG1692201 consensus Putative cargo transport protein EMP24 ( 92.67
PF0939492 Inhibitor_I42: Chagasin family peptidase inhibitor 85.59
PF01105183 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro 83.58
PF0284542 CUE: CUE domain; InterPro: IPR003892 This domain m 80.34
>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.4e-39  Score=318.19  Aligned_cols=241  Identities=30%  Similarity=0.486  Sum_probs=200.3

Q ss_pred             ccCcCCCCCHHHHHHHHHHHHHHhhccCCCCCCcccccccccCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 014036           56 DSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRK  135 (432)
Q Consensus        56 ~~~~l~~L~~~q~~~l~elr~~l~~~~~~~~~~~~~~~g~p~l~~~~~~~D~~LlRfLra~~~dv~~A~~~l~~~l~wR~  135 (432)
                      ....++++++.+++.++++| |+....              +++ ....+|.+|+||||||+||+++|.+||.+++.||+
T Consensus        11 ~~~~~~~~~~~~~~~i~~lr-~~~~~~--------------~l~-~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~   74 (317)
T KOG1471|consen   11 AKEELNEITESEEAVIAQLR-WLLQKP--------------HLP-NKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRK   74 (317)
T ss_pred             cccccCCCcHHHHHHHHHHH-HHhhcc--------------CCC-CCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence            34457889999999999999 555553              343 13789999999999999999999999999999999


Q ss_pred             HhCCCCCcccCCChhhhcc-ceeeeeccCCCCCeEEEEEcCccCchhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhh---
Q 014036          136 EFGADGIVEEDLGFKELEG-VVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLL---  211 (432)
Q Consensus       136 ~~~~d~i~~~~~~~~~l~~-~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~~~~~~~~~~~~~E~~~~~~---  211 (432)
                      +++++.+....-....+.. ...+.+|.|++|+|+++.+.|..|.++++.++..     .++.++.+..+|+....+   
T Consensus        75 ~~~~d~i~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~-----~~~~~~~~~~~e~~~~~~~e~  149 (317)
T KOG1471|consen   75 RNKLDEIFEDFEEDDELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGS-----LDYLKYHFKEFEKVFKLVLEL  149 (317)
T ss_pred             HhCCccHhhccccchhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccH-----HHHHHHHHHHHHHHHHHHHHH
Confidence            9999998875111133333 3357899999999999999999999998865432     666777666666555332   


Q ss_pred             --ccCCCCeeeEEEEEeCCCCCchhHH----HHHHHHHHHHhhccccccceEEEEeCchhHHHHHhhhccCCCccccceE
Q 014036          212 --HFKPGGVNSIIQVTDLKDMPKRELR----VASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKF  285 (432)
Q Consensus       212 --~~~~~~~~~iv~IiDl~g~s~~~~~----~~~k~~~~~lq~~YPe~l~~i~iINaP~~f~~~~~lvkpfL~~~t~~KI  285 (432)
                        +...++++|+++|+||+|++++++.    ..++.++.++|++|||+++++||||+|++|+++|+++||||+++|++||
T Consensus       150 ~~~~~~~~~~g~~~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki  229 (317)
T KOG1471|consen  150 ELKTGERQISGIVTIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKI  229 (317)
T ss_pred             HHHHhcCCcceeEEEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhh
Confidence              1124579999999999999998873    5789999999999999999999999999999999999999999999999


Q ss_pred             EEecCCccHHHHhcccCCCCCcccCCCCCCCCC
Q 014036          286 VISKEGNVAETLYKFVRPEDIPVQYGGLSRPSD  318 (432)
Q Consensus       286 ~~~~~~~~~~~L~~~i~~~~LP~~yGG~~~~~d  318 (432)
                      ++++ +++.++|+++|++++||.+|||++.+.+
T Consensus       230 ~~~~-~~~~~~L~k~i~~~~LP~~yGG~~~~~~  261 (317)
T KOG1471|consen  230 HVLH-SKDKESLLKYIPPEVLPEEYGGTCGDLD  261 (317)
T ss_pred             eecC-CCchhhhhhhCCHhhCccccCCCccccc
Confidence            9554 5789999999999999999999999864

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13897 GOLD_2: Golgi-dynamics membrane-trafficking Back     alignment and domain information
>KOG3878 consensus Protein involved in maintenance of Golgi structure and ER-Golgi transport [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG3287 consensus Membrane trafficking protein, emp24/gp25L/p24 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1693 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1692 consensus Putative cargo transport protein EMP24 (p24 protein family) [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF09394 Inhibitor_I42: Chagasin family peptidase inhibitor I42; InterPro: IPR018990 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins Back     alignment and domain information
>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 3e-17
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 4e-17
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 7e-17
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 4e-15
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 8e-15
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 1e-14
4fmm_A360 Dimeric Sec14 Family Homolog 3 From Saccharomyces C 1e-13
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 3e-08
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 4e-07
3hy5_A316 Crystal Structure Of Cralbp Length = 316 1e-05
3hx3_A316 Crystal Structure Of Cralbp Mutant R234w Length = 3 9e-05
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure 
Iteration: 1

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 63/392 (16%)
Query: 60  VSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFR 119
           V  L   +K+AL + +  + D              +P L   D   D  LL++LRAR F 
Sbjct: 5   VGDLSPRQKEALAKFRENVQDV-------------LPALPNPD---DYFLLRWLRARSFD 48
Query: 120 VLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAY----MQGYDREGHPVCYNAYG 175
           +  S  ML K + +RK+   D I+     ++  E +  Y    M GYD +G PV Y+  G
Sbjct: 49  LQKSEAMLRKHVEFRKQKDIDNII----SWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIG 104
Query: 176 VFRDKDMYERIFGDDEK--LKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKR 233
               K +   +F   ++  L+  +R    +L+   +        V +I  + D + +  +
Sbjct: 105 PLDAKGL---LFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLK 161
Query: 234 ELRV----ASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISK 289
            L      A  + L +F++NYPE + R   +  P  F + Y++  PFL++ T+ K ++  
Sbjct: 162 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG 221
Query: 290 EGNVAETLYKFVRPEDIPVQYGG-LSRP-------SDLNHGPPKPASEFT---------- 331
             N  E L K + P+ +PV+YGG ++ P       S +N+G   P   +           
Sbjct: 222 -ANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEH 280
Query: 332 ---VKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISP 388
              +  G    ++ E +  G  + W  +  G D+ +   F+    G    A E   ++ P
Sbjct: 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGI-FLKTKMGERQRAGEM-TEVLP 338
Query: 389 SEEAIRN------SFTSKEAGKLVLSVDNSSS 414
           ++    +      + T  + G  VL  DN+ S
Sbjct: 339 NQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYS 370
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure
>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316 Back     alignment and structure
>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query432
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 3e-84
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 2e-67
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 6e-66
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 2e-37
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 8e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
 Score =  262 bits (671), Expect = 3e-84
 Identities = 87/403 (21%), Positives = 151/403 (37%), Gaps = 58/403 (14%)

Query: 59  FVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDF 118
            V  L   +K+AL + +  + D                +L       D  LL++LRAR F
Sbjct: 4   RVGDLSPRQKEALAKFRENVQD----------------VLPALPNPDDYFLLRWLRARSF 47

Query: 119 RVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFR 178
            +  S  ML K + +RK+   D I+         + +   M GYD +G PV Y+  G   
Sbjct: 48  DLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLD 107

Query: 179 DKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFK----PGGVNSIIQVTDLKDMPKRE 234
            K +       D      LR +++  E  +     +       V +I  + D + +  + 
Sbjct: 108 AKGLLFSASKQD-----LLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKH 162

Query: 235 L----RVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKE 290
           L      A  + L +F++NYPE + R   +  P  F + Y++  PFL++ T+ K ++   
Sbjct: 163 LWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA 222

Query: 291 GNVAETLYKFVRPEDIPVQYGGLSRPSD--------LNHGPPKPAS-------------E 329
               E L K + P+ +PV+YGG     D        +N+G   P                
Sbjct: 223 NW-KEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHS 281

Query: 330 FTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVP----NAEGSYTIAVEKPRK 385
             +  G    ++ E +  G  + W  +  G D+ +                   V   ++
Sbjct: 282 VQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQR 341

Query: 386 ISPSEEAIRNSFTSKEAGKLVLSVDNSSS--RRRKVAAYRYIV 426
            +        + T  + G  VL  DN+ S    +KV  +   V
Sbjct: 342 YNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKV-NFTVEV 383
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query432
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 98.94
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.66
1wgl_A59 TOLL-interacting protein; CUE domain, structural g 83.63
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
Probab=100.00  E-value=2.1e-71  Score=561.56  Aligned_cols=349  Identities=25%  Similarity=0.413  Sum_probs=300.0

Q ss_pred             cCcCCCCCHHHHHHHHHHHHHHhhccCCCCCCcccccccccCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 014036           57 SYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKE  136 (432)
Q Consensus        57 ~~~l~~L~~~q~~~l~elr~~l~~~~~~~~~~~~~~~g~p~l~~~~~~~D~~LlRfLra~~~dv~~A~~~l~~~l~wR~~  136 (432)
                      ++++++|+++|+++|++||+++++...             ++   +..+|.+|+||||||+||+++|.+||+++++||++
T Consensus         2 ~g~~~~l~~~q~~~l~~lr~~l~~~~~-------------~l---~~~dD~~LlRFLrarkfdv~~A~~~l~~~l~wR~~   65 (403)
T 1olm_A            2 SGRVGDLSPRQKEALAKFRENVQDVLP-------------AL---PNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQ   65 (403)
T ss_dssp             CSBTTBCCHHHHHHHHHHHHHHGGGGG-------------GS---SCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHhhcc-------------CC---CCCChhHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999998742             23   35789999999999999999999999999999999


Q ss_pred             hCCCCCcccCCChhhhccc-eeeeeccCCCCCeEEEEEcCccCchhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhhccC-
Q 014036          137 FGADGIVEEDLGFKELEGV-VAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFK-  214 (432)
Q Consensus       137 ~~~d~i~~~~~~~~~l~~~-~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~-  214 (432)
                      ++++++.....+ +.+..+ ..+++|+|++||||+++++|++|++++++..     +.+++++++++++|.+++.+..+ 
T Consensus        66 ~~~~~i~~~~~~-~~~~~~~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~-----~~~~~~r~~~~~~E~~~~~~~~~s  139 (403)
T 1olm_A           66 KDIDNIISWQPP-EVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSA-----SKQDLLRTKMRECELLLQECAHQT  139 (403)
T ss_dssp             TTGGGGGGSCCC-HHHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTTS-----CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcccccCCH-HHHHHhCCceeeccCCCcCEEEEEecCCCChHHhhccC-----CHHHHHHHHHHHHHHHHHHHHhhH
Confidence            999887763333 444432 2467999999999999999999998876532     24889999999999998876432 


Q ss_pred             ---CCCeeeEEEEEeCCCCCchhH----HHHHHHHHHHHhhccccccceEEEEeCchhHHHHHhhhccCCCccccceEEE
Q 014036          215 ---PGGVNSIIQVTDLKDMPKREL----RVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVI  287 (432)
Q Consensus       215 ---~~~~~~iv~IiDl~g~s~~~~----~~~~k~~~~~lq~~YPe~l~~i~iINaP~~f~~~~~lvkpfL~~~t~~KI~~  287 (432)
                         ..++.++++|+||+|++++++    ...++.++.++|+||||||+++||||+|++|+++|+++||||+++|++||+|
T Consensus       140 ~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~  219 (403)
T 1olm_A          140 TKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMV  219 (403)
T ss_dssp             HHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEE
T ss_pred             HhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEE
Confidence               225789999999999999876    3578999999999999999999999999999999999999999999999999


Q ss_pred             ecCCccHHHHhcccCCCCCcccCCCCCCCCC--CC------CCCCCC------------Cc-ceeeeCCceEEEEEeeeC
Q 014036          288 SKEGNVAETLYKFVRPEDIPVQYGGLSRPSD--LN------HGPPKP------------AS-EFTVKGGEKVNIQIEGIE  346 (432)
Q Consensus       288 ~~~~~~~~~L~~~i~~~~LP~~yGG~~~~~d--~~------~g~~~~------------~~-~~~V~~g~~~~v~i~v~~  346 (432)
                      ++ +++.+.|.++||+++||++|||++.+.+  |.      .|+++|            .. .++|+||++++|+|+|.+
T Consensus       220 ~~-~~~~~~L~~~I~~~~LP~~yGG~~~~~~~~~~c~~~i~~gg~vp~~~~~~~~~~~~~~~~~~V~~g~~~~v~~~v~~  298 (403)
T 1olm_A          220 LG-ANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILF  298 (403)
T ss_dssp             CC-TTHHHHHTTTSCGGGSBGGGTSSBCCTTCCTTCTTTCBCCCCCCGGGCSCSSCCCCCSEEEEECTTCEEEEEEEECS
T ss_pred             EC-hhHHHHHHhhcChhhCchhhCCCcCCCCCCcccccccccCCCCCcccccCCCcccccceEEEEcCCCEEEEEEEEcC
Confidence            97 3778899999999999999999998653  32      344332            33 499999999999999998


Q ss_pred             CCcEEEEEEEecCCCeEEEEEEeeCC-----CCceEEEeeCceeeCCCCcccccEEEeCcCcEEEEEEeCCCcc--cccc
Q 014036          347 AGATITWDIVVGGWDLEYSAEFVPNA-----EGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSR--RRKV  419 (432)
Q Consensus       347 ~g~~l~W~f~t~~~DI~F~v~~~~~~-----~~~~~~~v~~~~r~~~~~~~~~g~~~~~~~G~y~l~fdNs~S~--~kk~  419 (432)
                      +|++|.|+|+|+++||+|||+|.++.     .++++++++ ..|+.||.++++|+++|++||+|+|+|||+|||  +|+|
T Consensus       299 ~g~~l~W~f~~~~~DI~F~v~~~~~~~~~~~~~~~~~v~p-~~r~~~~~~~~~G~~~~~~~G~y~l~fdNs~S~~~~k~l  377 (403)
T 1olm_A          299 PGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLP-NQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKV  377 (403)
T ss_dssp             TTCEEEEEEEESSSCEEEEEEEC----CCCCGGGSEEEEE-EEEECTTTSCEEEEEECCSCEEEEEEEECTTCCCCSEEE
T ss_pred             CCCEEEEEEEecCCcEEEEEEEecccccccCCCcceEEee-eeeecCccccccCEEEcCCCeEEEEEEeccccceeceEE
Confidence            99999999999999999999998532     245677776 899999999999999999999999999999996  5666


Q ss_pred             eEEEEEEecCC
Q 014036          420 AAYRYIVRKSS  430 (432)
Q Consensus       420 ~~Y~~~v~~~~  430 (432)
                       .|++.|.+|+
T Consensus       378 -~y~v~v~~~~  387 (403)
T 1olm_A          378 -NFTVEVLLPD  387 (403)
T ss_dssp             -EEEEEEECCC
T ss_pred             -EEEEEEeCCc
Confidence             9999999886
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 432
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 2e-33
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 2e-31
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 5e-19
d1olma2119 b.132.1.1 (A:275-393) Supernatant protein factor ( 2e-16
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 3e-15
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 7e-15
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 7e-10
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 2e-33
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 22/191 (11%)

Query: 157 AYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFK-- 214
             M GYD +G PV Y+  G    K +       D      LR +++  E  +     +  
Sbjct: 11  GGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQD-----LLRTKMRECELLLQECAHQTT 65

Query: 215 --PGGVNSIIQVTDLKDMPKRELRVAS----NQILSLFQDNYPEMVARKIFINVPWYFSM 268
                V +I  + D + +  + L   +     + L +F++NYPE + R   +  P  F +
Sbjct: 66  KLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPV 125

Query: 269 LYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSD--------LN 320
            Y++  PFL++ T+ K ++    N  E L K + P+ +PV+YGG     D        +N
Sbjct: 126 AYNLIKPFLSEDTRKKIMVLG-ANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKIN 184

Query: 321 HGPPKPASEFT 331
           +G   P   + 
Sbjct: 185 YGGDIPRKYYV 195
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 119 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query432
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 99.97
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.96
d1olma2119 Supernatant protein factor (SPF), C-terminal domai 99.94
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.73
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.65
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.37
d1wgla_59 Toll-interacting protein {Human (Homo sapiens) [Ta 81.02
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-34  Score=258.48  Aligned_cols=162  Identities=27%  Similarity=0.503  Sum_probs=141.7

Q ss_pred             hhccce-eeeeccCCCCCeEEEEEcCccCchhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhhccC----CCCeeeEEEEE
Q 014036          151 ELEGVV-AYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFK----PGGVNSIIQVT  225 (432)
Q Consensus       151 ~l~~~~-~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~----~~~~~~iv~Ii  225 (432)
                      .++.+. .++||+|++||||+++++|++|.+++++..     +.++++++.++.+|.+++.+...    ...++++++|+
T Consensus         4 ~i~~~~p~~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~-----~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~   78 (199)
T d1olma3           4 VIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSA-----SKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIY   78 (199)
T ss_dssp             HHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTTS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEE
T ss_pred             HHHHHCCCccccCCCCCCEEEEEecccCChHHhhccC-----CHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEE
Confidence            344433 458999999999999999999999887532     23789999999999998876432    24578999999


Q ss_pred             eCCCCCchhH----HHHHHHHHHHHhhccccccceEEEEeCchhHHHHHhhhccCCCccccceEEEecCCccHHHHhccc
Q 014036          226 DLKDMPKREL----RVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFV  301 (432)
Q Consensus       226 Dl~g~s~~~~----~~~~k~~~~~lq~~YPe~l~~i~iINaP~~f~~~~~lvkpfL~~~t~~KI~~~~~~~~~~~L~~~i  301 (432)
                      ||+|++++++    .++++.++.++|++|||+++++||||+|++|+++|+++|+||+++|++||+|++ +++.+.|.++|
T Consensus        79 Dl~g~s~~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~-~~~~~~L~~~i  157 (199)
T d1olma3          79 DCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG-ANWKEVLLKHI  157 (199)
T ss_dssp             ECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECC-TTHHHHHTTTS
T ss_pred             ECCCCchhhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeC-CCCHHHHHHhC
Confidence            9999998876    467899999999999999999999999999999999999999999999999997 56789999999


Q ss_pred             CCCCCcccCCCCCCCCC
Q 014036          302 RPEDIPVQYGGLSRPSD  318 (432)
Q Consensus       302 ~~~~LP~~yGG~~~~~d  318 (432)
                      ++++||++|||+|+|++
T Consensus       158 ~~~~lP~~yGGt~~~~~  174 (199)
T d1olma3         158 SPDQVPVEYGGTMTDPD  174 (199)
T ss_dssp             CGGGSBGGGTSSBCCTT
T ss_pred             CHhhCCHHhCCCCCCCC
Confidence            99999999999998764
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure