Citrus Sinensis ID: 014055

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
Protein Sequence
MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSSSKRSHLAASESSDSDDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTLMMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPKKWMELSNGDDRSLADSEPSFNLCKDLYPPIPLGRHDQLKYRRH
Secondary Structure (PSIPRED)
ccccccHHHHHHccccccccccccccccccccccEEccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHccccccccccccccccccccEEEEEccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHccc
Coil and Loop (DISEMBL)
MGVSGKWLKSLVThskkpqiadhekvndktkKKWRLwrsssegygssskrshlaasessdsddAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDehcsqvdpttqaekgwcaipgtVEEVRTKLQLRQEGAIKRERAIAYYLSqkqsrscpspnsrtnkpvksikhhrldkkgqgwswlDSWMAIKPWDSRLLeemhsdpsemtpfyrksednifgfyscsseqdsVKVRRnnvntkiiakppittqitrsssspsseslydgtspstsssstsvtpisgnTLMMERAEesyyrkpsymnlTRSIKAKQKasrfcspkkwmelsngddrsladsepsfnlckdlyppiplgrhdqlkyrrh
Flexible Loop (DISEMBL)
mgvsgkwlkslvthskkpqiadhekvndktkkkwrlwrsssegygssskrshLAASESSDSDDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLsqkqsrscpspnsrtnkpvksikhhrldkkgqgwswldSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNnvntkiiakppittqitrsssspsseslydgtspstsssstsvtpisgnTLMMERAEEsyyrkpsymnltRSIKAKQKASRFCSPKKWMELSNGDDRSLADSEPSfnlckdlyppiplgrhdqlkyrrh
Low Complexity Region (SEG)
MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWrsssegygssskrshlaasessdsddafgaamaTVVRALPKDFRLIRQEWAAIRIQTafrgllarrafralkavvrlQAIFRGRQVRKQAAVTLRCMqalvrvqaqvrarSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNNVNTKIIAKPPITTQITRsssspssesLYDGtspstsssstsvtpisGNTLMMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPKKWMELSNGDDRSLADSEPSFNLCKDLYPPIPLGRHDQLKYRRH
Disordered region (IsUnstruct)
****************************************************************FGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVG*******MVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYL******************************GQGWSWLDSWMAIKPWDSRLL******************DNIFGFYSC*****************II****************************************************************************************************LCKDLYP***************
Disordered Region (DISOPRED)
MGVSGKWLK****************************************************************************EWAAIRIQTAFRGLLARRAFRALKAVVRLQAIF****VRKQ*AVTLRCMQAL*************************************************************************************************************SWLDSWMA*********************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWR************************DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLS****************************KGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNNVNTKIIAKPPIT*******************************PISGNTLMMERAEESYYRKPSYMNLTRSIK*********SPKKWMEL********ADSEPSFNLCKDLYPPIPLGRHDQLKYRRH
Disordered Region (DISPRO)
*****KW*****THSK********************************************************V*ALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRS*********************KKGQGWSWLDSWMAIKPWDS********************************************************************************************************************************************************DLYPPI*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSSSKRSHLAASESSDSDDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTLMMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPKKWMELSNGDDRSLADSEPSFNLCKDLYPPIPLGRHDQLKYRRH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	431	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.387	0.367	0.363	1e-24
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.352	0.227	0.360	5e-17
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.164	0.120	0.521	1e-13
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.122	0.066	0.532	6e-11

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 12/179 (6%)

Query: 84  RQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQ 143
           ++E AAI IQ+ FRG LARR  + ++   RL+ +  G  V++QAA+TL+CMQ L RVQ+Q
Sbjct: 106 KEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQ 165

Query: 144 VRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIK 203
           +R+R + M+ E QA    LL +H  ++         W     + E+V   +  + E  ++
Sbjct: 166 IRSRRIRMSEENQARHKQLLQKHAKELGGLKNG-GNWNYSNQSKEQVEAGMLHKYEATMR 224

Query: 204 RERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQ--GWSWLDSWMAIKPWDS 260
           RERA+AY  + +Q+       S+T  P+       +D      GWSWL+ WMA +PW+S
Sbjct: 225 RERALAYAFTHQQNLKS---FSKTANPM------FMDPSNPTWGWSWLERWMAGRPWES 274

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 89.4 bits (220), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 17/169 (10%)

Query: 82  LIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQ 141
           L  Q  +A +IQ AFRG +AR++FRALK +VRLQ + RG  V++Q    ++ MQ +VRVQ
Sbjct: 318 LPVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQ 377

Query: 142 AQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGA 201
           +Q+++R + M  E QA V    DE  ++   +      W     T EE  ++ Q + +  
Sbjct: 378 SQIQSRRIKML-ENQAQVEK--DE--AKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAI 432

Query: 202 IKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLD 250
           IKRER++AY  S+K  ++ P          KS + +R     Q W+W+D
Sbjct: 433 IKRERSMAYAYSRKLWKNSP----------KSTQDNR--SFPQWWNWVD 469

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 48/71 (67%)

Query: 79  DFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALV 138
           D   I++E AA  +Q AFRG LARRAF ALK ++RLQA+ RG  VR+QA  TL  +  +V
Sbjct: 106 DAERIQREIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIV 165

Query: 139 RVQAQVRARSV 149
           R+QA  R R +
Sbjct: 166 RLQAFARGREI 176

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 41/62 (66%)

Query: 86  EWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVR 145
           E   + IQ A RG LARR     K V++LQA  RG  VR QA  +LRC+QA+V++QA VR
Sbjct: 215 ESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVR 274

Query: 146 AR 147
           AR
Sbjct: 275 AR 276

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
224073472	443	predicted protein [Populus trichocarpa]	0.976	0.950	0.607	1e-130
255560741	429	conserved hypothetical protein [Ricinus	0.935	0.939	0.617	1e-114
225429506	449	PREDICTED: uncharacterized protein LOC10	0.958	0.919	0.601	1e-113
147866673	992	hypothetical protein VITISV_003845 [Viti	0.958	0.416	0.599	1e-112
255550069	452	calmodulin binding protein, putative [Ri	0.983	0.938	0.579	1e-111
224088814	421	predicted protein [Populus trichocarpa]	0.925	0.947	0.570	1e-104
296081641	404	unnamed protein product [Vitis vinifera]	0.874	0.933	0.576	1e-103
225442206	440	PREDICTED: protein IQ-DOMAIN 1 [Vitis vi	0.958	0.938	0.566	1e-100
297743040	966	unnamed protein product [Vitis vinifera]	0.960	0.428	0.565	1e-100
356522180	433	PREDICTED: uncharacterized protein LOC10	0.974	0.969	0.520	8e-98

>gi|224073472|ref|XP_002304100.1| predicted protein [Populus trichocarpa] gi|222841532|gb|EEE79079.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 274/451 (60%), Positives = 327/451 (72%), Gaps = 30/451 (6%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSSS----KRSHLAAS 56
           MG SG WLKSL+T  K P     ++ N   KKKWRLWRS SEGY  +S    KR H+A+S
Sbjct: 1   MGASGNWLKSLITL-KNPLTTTDQRDNKGNKKKWRLWRSPSEGYIQTSIKGSKRVHVASS 59

Query: 57  ESSD----SDDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVV 112
           ESSD    +DDAF AAMATV RA P+DF +++QEWAAIRIQTAFRGLLARRA RALKAVV
Sbjct: 60  ESSDSSLVADDAFTAAMATVARAPPRDFMMVKQEWAAIRIQTAFRGLLARRATRALKAVV 119

Query: 113 RLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDP 172
           RLQAIFRGR+VRKQAAVTLRCMQALVRVQA+VRA++V MA E QA   ++L+E   Q DP
Sbjct: 120 RLQAIFRGRKVRKQAAVTLRCMQALVRVQARVRAQTVSMA-EAQA-TQNVLNECMCQADP 177

Query: 173 TTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRS-CPSPNSRTNKPV 231
             QAEK WC  PGTV++V+ KLQ+R EGAIKRERAIAY LSQ++SRS C SP  RT+K  
Sbjct: 178 IKQAEKRWCDSPGTVDKVKKKLQMRTEGAIKRERAIAYSLSQQKSRSNCASPCRRTSKSA 237

Query: 232 KSIKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCS 291
            S+K+  L+    GWSWL+ WMA KPW+ RL+EE H+  SE+ PF RKSEDNI  FY   
Sbjct: 238 LSLKNQSLNNSSPGWSWLERWMATKPWEDRLVEEFHTKSSEI-PFSRKSEDNIASFY--F 294

Query: 292 SEQDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGN 351
           S+ DS KVRRNNV T I+AKPPI   +TRSSS+PSSESLY+ +S ST+S+S S  PI  +
Sbjct: 295 SKHDSEKVRRNNVATGILAKPPIVNHVTRSSSTPSSESLYNESSLSTASTSPSPIPILND 354

Query: 352 TLMMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPK------------KWMELSNGDDR 399
            L+    E SY +KP+YMNLT S K KQK SR  S              K MEL + D +
Sbjct: 355 MLV---EEGSYNQKPAYMNLTESTKLKQKNSRHSSQNIQRQMMDDKFLMKSMELLDEDSK 411

Query: 400 SLADSEPSFNLCKDLYPPIPLGRHDQLKYRR 430
           S ADS PSF+L +DLYPP+PLGRHD+++ RR
Sbjct: 412 SSADSNPSFHLSRDLYPPLPLGRHDEIRNRR 442

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560741|ref|XP_002521384.1| conserved hypothetical protein [Ricinus communis] gi|223539462|gb|EEF41052.1| conserved hypothetical protein [Ricinus communis]

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 268/434 (61%), Positives = 325/434 (74%), Gaps = 31/434 (7%)

Query: 21  ADHEKVNDKTKKKWRLWRSSSEGYGSSS------KRSHLAASESSDS----DDAFGAAMA 70
           A  ++   K KKKWRLWRSSSEG+GSSS      ++ H+A+SE+SDS    DDAF AAMA
Sbjct: 4   AKEKQSETKGKKKWRLWRSSSEGFGSSSSSSKGLRKVHMASSEASDSSLVLDDAFAAAMA 63

Query: 71  TVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVT 130
           TV RA P+DF +++QEWAAIRIQTAFRGLLARRA RALKAVVR+QAIFRGRQVRKQAAVT
Sbjct: 64  TVARAPPRDFMVVKQEWAAIRIQTAFRGLLARRALRALKAVVRIQAIFRGRQVRKQAAVT 123

Query: 131 LRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEV 190
           LRCMQALVRVQA++RA+   M+SE QA +  LLDEH    DPT QAE+GWC   G+ EEV
Sbjct: 124 LRCMQALVRVQARMRAQGASMSSEGQAAL-KLLDEHFIS-DPTRQAEQGWCCSLGSAEEV 181

Query: 191 RTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQ-GWSWL 249
           R KLQ+RQEGAIKRERAIAY LSQ+QSRSC SP  RT+KP  S+K+ R+D     GWSWL
Sbjct: 182 RAKLQMRQEGAIKRERAIAYALSQQQSRSCGSPARRTSKPAVSLKNQRVDNSSSPGWSWL 241

Query: 250 DSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVKVRRNNVNTKII 309
           + WMA KPW+SRL+EE+H+D SE   + RKSEDNI   YS  S  +SV+VRRNNV+TKI+
Sbjct: 242 ERWMATKPWESRLMEEIHTDSSETPTYSRKSEDNIASIYSYPSIHESVEVRRNNVSTKIL 301

Query: 310 AKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTLMMERAEESYYRKPSYM 369
           AKPP  + I RSSS+P+SESL D +S STSS++ S  P S +T+++++  ES  RKPSYM
Sbjct: 302 AKPPTVSHIIRSSSAPNSESLCDESSESTSSTAVSPIPFSSHTILVDKV-ESNTRKPSYM 360

Query: 370 NLTRSIKAKQKASRFCS---PKKWME---------LSNGDDRSLADSEPSFNLCKDLYPP 417
           NLT + KAKQK+ R  +   P+  ME         LSNGD      S PSF+L +DLYPP
Sbjct: 361 NLTEATKAKQKSCRHSAAKMPRHLMENQFHTMSMPLSNGD-----GSTPSFSLSRDLYPP 415

Query: 418 IPLGRHDQLKYRRH 431
           +PLGRHD+L+ RRH
Sbjct: 416 LPLGRHDELRDRRH 429

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429506|ref|XP_002279054.1| PREDICTED: uncharacterized protein LOC100254187 [Vitis vinifera]

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 261/434 (60%), Positives = 309/434 (71%), Gaps = 21/434 (4%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSS---SKRSHLAASE 57
           MG SGKW+K+L+   KKP+  DHEKV  K+KK WRLWRSSS   GSS    K  H A SE
Sbjct: 1   MGGSGKWVKALIGL-KKPEKDDHEKVGGKSKK-WRLWRSSSGEMGSSWRGFKGGHRAYSE 58

Query: 58  SSDSD----DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVR 113
            SDS     DAF AA+ATVVRA PKDFR++RQEWAAIRIQTAFRG LARRA RALK VVR
Sbjct: 59  GSDSSSVGTDAFTAAVATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVR 118

Query: 114 LQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPT 173
           LQA+ RGRQVRKQAAVTLRCMQALVRVQA+VRAR V M+ E QA V  LLDE  SQ D  
Sbjct: 119 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQA-VQKLLDERRSQADLL 177

Query: 174 TQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKS 233
            +AE+GWC   GT+ +V+TKLQ+RQEGA KRERAIAY L+QKQ RS  + NS+TN  V S
Sbjct: 178 KEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVSS 237

Query: 234 IKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSE 293
           +K+H LDK   GWSWL+ WMA KPW++RL+E+ H+DPSE TP ++   + + G +S SSE
Sbjct: 238 VKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGTHSKSSE 297

Query: 294 QDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTL 353
             SVKVRRNNV T+I AKPP    +TRSSSSPSSE  YD  S ++SS  TS TP+SGNT+
Sbjct: 298 PGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYD-ESSASSSICTSATPVSGNTV 356

Query: 354 MM-ERAEESYYRKPSYMNLTRSIKAKQKASR--------FCSPKKWMELSNGDDRSLADS 404
           +  ++ E+S   +PSYMNLT S KAKQ++ R        F   KK     N D +S A S
Sbjct: 357 LTSDKTEDSSNYRPSYMNLTESTKAKQRSHRVQRQSMDEFQFLKKSGLYCNVDTKSSAGS 416

Query: 405 E-PSFNLCKDLYPP 417
           + PS N  K LY P
Sbjct: 417 DPPSVNFSKPLYLP 430

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866673|emb|CAN83680.1| hypothetical protein VITISV_003845 [Vitis vinifera]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/434 (59%), Positives = 309/434 (71%), Gaps = 21/434 (4%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSS---SKRSHLAASE 57
           MG SGKW+K+L+   KKP+  DHEKV  K+KK WRLWRSSS   GSS    K  H A SE
Sbjct: 544 MGGSGKWVKALIGL-KKPEKDDHEKVGGKSKK-WRLWRSSSGEMGSSWRGFKGGHRAYSE 601

Query: 58  SSDSD----DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVR 113
            SDS     DAF AA+ATVVRA PK FR++RQEWAAIRIQTAFRG LARRA RALK VVR
Sbjct: 602 GSDSSSVGTDAFTAAVATVVRAPPKGFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVR 661

Query: 114 LQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPT 173
           LQA+ RGRQVRKQAAVTLRCMQALVRVQA+VRAR V M+ E QA V  LLDE  SQ D  
Sbjct: 662 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQA-VQKLLDERRSQADLL 720

Query: 174 TQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKS 233
            +AE+GWC   GT+ +V+TKLQ+RQEGA KRERAIAY L+QKQ RS  + NS+TN  V S
Sbjct: 721 KEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVSS 780

Query: 234 IKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSE 293
           +K+H LDK   GWSWL+ WMA KPW++RL+E+ H+DPSE TP ++   + + G +S SSE
Sbjct: 781 VKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGPHSKSSE 840

Query: 294 QDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTL 353
             SVKVRRNNV T+I AKPP    +TRSSSSPSSE  YD +S ++SS  TS TP+SGNT+
Sbjct: 841 PGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYDESS-ASSSICTSATPVSGNTV 899

Query: 354 MM-ERAEESYYRKPSYMNLTRSIKAKQKASR--------FCSPKKWMELSNGDDRSLADS 404
           +  ++ E+S   +PSYMNLT S KAKQ++ R        F   KK     N D +S A S
Sbjct: 900 LTSDKTEDSSNYRPSYMNLTESTKAKQRSHRVQRQSMDEFQFLKKSGVYCNVDTKSSAGS 959

Query: 405 E-PSFNLCKDLYPP 417
           + PS N  K LY P
Sbjct: 960 DPPSVNFSKPLYLP 973

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550069|ref|XP_002516085.1| calmodulin binding protein, putative [Ricinus communis] gi|223544571|gb|EEF46087.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 260/449 (57%), Positives = 311/449 (69%), Gaps = 25/449 (5%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGS--SSKRSHLAASES 58
           MG SGKW+KSL+   KK    D+EKVN K+KK W+LWRSSS    S    K +H AASE+
Sbjct: 1   MGASGKWVKSLIGL-KKSDKEDYEKVNGKSKK-WKLWRSSSGDLSSWKGFKGNHRAASEA 58

Query: 59  SDSD---DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQ 115
           S S    DAF AAMATVVRA PKDFR++RQEWAAIRIQTAFRG LARRA RALK VVRLQ
Sbjct: 59  SGSSPLTDAFSAAMATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQ 118

Query: 116 AIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQ 175
           A+ RGRQVRKQAAVTLRCMQALVRVQA+VRAR V M+ E QA V  +LDEH S+ D   Q
Sbjct: 119 ALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQA-VQKMLDEHRSKADLLKQ 177

Query: 176 AEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIK 235
           AE+GWC   GT+E+V+TKLQ+RQEGA KRERAIAY L+QKQ RS PS N R+N  + S K
Sbjct: 178 AEEGWCDSKGTLEDVKTKLQMRQEGAFKRERAIAYSLAQKQWRSNPSSNGRSNSSLSSFK 237

Query: 236 HHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQD 295
           +H  DK   GWSWL+ WMA KPW++RL+E+  +DPS+ TP  +   D++   +S SSEQ 
Sbjct: 238 NHEFDKNSWGWSWLERWMAAKPWETRLMEQSQNDPSDSTPPPKSCADSLVMKHSKSSEQS 297

Query: 296 SVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNT-LM 354
            VKVR+NNV T+I AKPPI   +TRSSSSPSSE   D  S ++SS  TS TPISGNT L 
Sbjct: 298 FVKVRKNNVTTRISAKPPI-GHVTRSSSSPSSEFRCD-ESSASSSICTSATPISGNTGLA 355

Query: 355 MERAEESYYRKPSYMNLTRSIKAKQK-------------ASRFCSPKKWMELSNGDDRSL 401
            +R EES   +P+YMNLT S KAK+K                F   ++    SNGD +S 
Sbjct: 356 SDRTEESGNSRPNYMNLTESTKAKRKIYNHLSNRIQRQSMDEFQFLRRSAAFSNGDSKSS 415

Query: 402 ADSEP-SFNLCKDLYPPIPLGRHDQLKYR 429
           A S+P S NL K L  P  L ++   ++R
Sbjct: 416 AGSDPSSVNLSKPLGLPTRLDKNSMKQFR 444

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088814|ref|XP_002308551.1| predicted protein [Populus trichocarpa] gi|222854527|gb|EEE92074.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/428 (57%), Positives = 294/428 (68%), Gaps = 29/428 (6%)

Query: 1   MGVSGKWLKSLVTHSKKPQIAD-HEKVNDKTKKKWRLWRSSSEGYGSS---SKRSHLAAS 56
           MG SGKW+KS++   K  +  D +EKV+ K+KK W+LWRSSS   GSS    K +H AAS
Sbjct: 1   MGASGKWVKSIIGLKKSDKDQDQYEKVSGKSKK-WKLWRSSSGDLGSSWKGFKGNHRAAS 59

Query: 57  ESSDSD---DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVR 113
           E+S S    D F AAMATVVRA PKDFR++RQEWAAIRIQTAFRG LARRA RALK VVR
Sbjct: 60  EASGSSPLADPFTAAMATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVR 119

Query: 114 LQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPT 173
           LQA+ RGRQVRKQAAVTL+CMQALVRVQA VRAR V M+ E QA V ++L+E  S+ D  
Sbjct: 120 LQALVRGRQVRKQAAVTLKCMQALVRVQAHVRARRVRMSLEGQA-VQNMLNERRSKADLL 178

Query: 174 TQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKS 233
             AE+GWC   GT+E+V++KLQ+RQEGA KRERAIAY L+QK      S N+R N  V S
Sbjct: 179 KHAEEGWCDRKGTLEDVKSKLQMRQEGAFKRERAIAYSLAQKVCHHHIS-NTRPNNSVYS 237

Query: 234 IKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSE 293
            K+   DK   GWSWL+ WMA KPW++RL+E+ H+DPS +TP  +   D     +S S E
Sbjct: 238 FKNEEFDKNSWGWSWLERWMAAKPWETRLMEQTHTDPS-VTPPPKSCVDA--STHSKSFE 294

Query: 294 QDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNT- 352
           Q SVKVR+NNV T+I A+PPI   +TRSSSSPSSE  +D  S ++SS  TS TPISGNT 
Sbjct: 295 QSSVKVRKNNVTTRISARPPI-GHVTRSSSSPSSEVRFD-ESSASSSICTSTTPISGNTG 352

Query: 353 LMMERAEESYYRKPSYMNLTRSIKAKQKAS-------------RFCSPKKWMELSNGDDR 399
           L  ++ EES   +P+YMNLT S KAKQ  S              F   KK    SNGD +
Sbjct: 353 LASDKTEESGNSRPNYMNLTESTKAKQNTSSHLFHRIQRQSMDEFQFFKKSAAFSNGDSK 412

Query: 400 SLADSEPS 407
           S A S+PS
Sbjct: 413 SSAGSDPS 420

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081641|emb|CBI20646.3| unnamed protein product [Vitis vinifera]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 245/425 (57%), Positives = 287/425 (67%), Gaps = 48/425 (11%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSS---SKRSHLAASE 57
           MG SGKW+K+L+   KKP+  DHEKV  K+KK WRLWRSSS   GSS    K  H A SE
Sbjct: 1   MGGSGKWVKALIGL-KKPEKDDHEKVGGKSKK-WRLWRSSSGEMGSSWRGFKGGHRAYSE 58

Query: 58  SSDSD----DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVR 113
            SDS     DAF AA+ATVVRA PKDFR++RQEWAAIRIQTAFRG LARRA RALK VVR
Sbjct: 59  GSDSSSVGTDAFTAAVATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVR 118

Query: 114 LQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPT 173
           LQA+ RGRQVRKQAAVTLRCMQALVRVQA+VRAR V M+ E QA V  LLDE  SQ D  
Sbjct: 119 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQA-VQKLLDERRSQADLL 177

Query: 174 TQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKS 233
            +AE+GWC   GT+ +V+TKLQ+RQEGA KRERAIAY L+QKQ RS  + NS+TN  V S
Sbjct: 178 KEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVSS 237

Query: 234 IKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSE 293
           +K+H LDK   GWSWL+ WMA KPW++RL+E+ H+DPSE TP ++   + + G +S SSE
Sbjct: 238 VKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGTHSKSSE 297

Query: 294 QDSVKVRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTL 353
             SVKVRRNNV T+I AKPP    +TRSSSSPSSE  YD  S ++SS  TS TP+SGNT 
Sbjct: 298 PGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYD-ESSASSSICTSATPVSGNT- 355

Query: 354 MMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPKKWMELSNGDDRSLADSE-PSFNLCK 412
                                     K+  +C         N D +S A S+ PS N  K
Sbjct: 356 --------------------------KSGLYC---------NVDTKSSAGSDPPSVNFSK 380

Query: 413 DLYPP 417
            LY P
Sbjct: 381 PLYLP 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442206|ref|XP_002274659.1| PREDICTED: protein IQ-DOMAIN 1 [Vitis vinifera]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/448 (56%), Positives = 308/448 (68%), Gaps = 35/448 (7%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEK-VNDKTKKKWRLWRSSSEGYGSSSKRSHLAASESS 59
           MG SG WLKSL+ H K  QI DHEK      ++KWRLWRSSS G G   K  ++AASE+S
Sbjct: 1   MGGSGNWLKSLIGH-KNAQIKDHEKEAGGNGRRKWRLWRSSSGGLGLKGK--NVAASEAS 57

Query: 60  DS----DDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQ 115
           DS     + F AA+A VVRA PKDF ++RQEWAAIRIQTAFRGLLARRA RALKA+VRLQ
Sbjct: 58  DSSVVAGNGFSAAVAAVVRAPPKDFMVVRQEWAAIRIQTAFRGLLARRALRALKALVRLQ 117

Query: 116 AIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQV-DPTT 174
           AI RGRQVRKQAAVTLRCMQALVRVQA+VRA+ V MASE QA     + +H   + DP  
Sbjct: 118 AIVRGRQVRKQAAVTLRCMQALVRVQARVRAQCVSMASEGQA--QQKVPDHLQNLPDPIK 175

Query: 175 QAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSI 234
           QAE+GWC   GTV++VRTKLQ+RQEGAIKRERAI+Y +SQK SR+   P  RT+K   S+
Sbjct: 176 QAEEGWCDRRGTVDQVRTKLQMRQEGAIKRERAISYSISQKPSRTNHCPYLRTSKSANSL 235

Query: 235 KHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSED-NIFGFYSCSSE 293
           K  + D    G SWL+ WMA KPW++RL+EE+ ++  EMTP  R+SED    GF S SSE
Sbjct: 236 KQQKQDNNCPGLSWLERWMAAKPWENRLMEEVQTERPEMTPLSRRSEDCYTAGFRSNSSE 295

Query: 294 QDSVKVRRNN--VNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGN 351
              +K +RNN  +  ++  + P+  QI+RSSS PSSE LYDG+S STSSSS +V      
Sbjct: 296 HSILKPKRNNNSLTPRMYPRSPVVGQISRSSSDPSSEFLYDGSSESTSSSSNTV------ 349

Query: 352 TLMMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPK-----------KWMELSNGDDRS 400
              ME  EE++  +PSYMNLT SIKAKQKAS++ SP            K M +S GD +S
Sbjct: 350 ---MEMVEENHTSRPSYMNLTESIKAKQKASKYSSPPRPLMEDAQLHMKSMAISTGDTKS 406

Query: 401 LADS-EPSFNLCKDLYPPIPLGRHDQLK 427
              S  PS  LCKDLYP I L R +++K
Sbjct: 407 STGSYTPSAKLCKDLYPTIQLDRFNRIK 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743040|emb|CBI35907.3| unnamed protein product [Vitis vinifera]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/446 (56%), Positives = 307/446 (68%), Gaps = 32/446 (7%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYGSSSKRSHLAASESSD 60
           MG SG WLKSL+ H K  QI DH++     ++KWRLWRSSS G G   K  ++AASE+SD
Sbjct: 525 MGGSGNWLKSLIGH-KNAQIKDHKEAGGNGRRKWRLWRSSSGGLGLKGK--NVAASEASD 581

Query: 61  SD----DAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQA 116
           S     + F AA+A VVRA PKDF ++RQEWAAIRIQTAFRGLLARRA RALKA+VRLQA
Sbjct: 582 SSVVAGNGFSAAVAAVVRAPPKDFMVVRQEWAAIRIQTAFRGLLARRALRALKALVRLQA 641

Query: 117 IFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQA 176
           I RGRQVRKQAAVTLRCMQALVRVQA+VRA+ V MASE QA    + D   +  DP  QA
Sbjct: 642 IVRGRQVRKQAAVTLRCMQALVRVQARVRAQCVSMASEGQAQ-QKVPDHLQNLPDPIKQA 700

Query: 177 EKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKH 236
           E+GWC   GTV++VRTKLQ+RQEGAIKRERAI+Y +SQK SR+   P  RT+K   S+K 
Sbjct: 701 EEGWCDRRGTVDQVRTKLQMRQEGAIKRERAISYSISQKPSRTNHCPYLRTSKSANSLKQ 760

Query: 237 HRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSED-NIFGFYSCSSEQD 295
            + D    G SWL+ WMA KPW++RL+EE+ ++  EMTP  R+SED    GF S SSE  
Sbjct: 761 QKQDNNCPGLSWLERWMAAKPWENRLMEEVQTERPEMTPLSRRSEDCYTAGFRSNSSEHS 820

Query: 296 SVKVRRNN--VNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTL 353
            +K +RNN  +  ++  + P+  QI+RSSS PSSE LYDG+S STSSSS +V        
Sbjct: 821 ILKPKRNNNSLTPRMYPRSPVVGQISRSSSDPSSEFLYDGSSESTSSSSNTV-------- 872

Query: 354 MMERAEESYYRKPSYMNLTRSIKAKQKASRFCSPK-----------KWMELSNGDDRSLA 402
            ME  EE++  +PSYMNLT SIKAKQKAS++ SP            K M +S GD +S  
Sbjct: 873 -MEMVEENHTSRPSYMNLTESIKAKQKASKYSSPPRPLMEDAQLHMKSMAISTGDTKSST 931

Query: 403 DS-EPSFNLCKDLYPPIPLGRHDQLK 427
            S  PS  LCKDLYP I L R +++K
Sbjct: 932 GSYTPSAKLCKDLYPTIQLDRFNRIK 957

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522180|ref|XP_003529725.1| PREDICTED: uncharacterized protein LOC100784093 [Glycine max]

 Score =  363 bits (933), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 227/436 (52%), Positives = 282/436 (64%), Gaps = 16/436 (3%)

Query: 1   MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWRSSSEGYG--SSSKRSHLAASES 58
           MG SG+WLKSL++  +KP   D EK  DK+K+KW+LW+S+SEG+G  SS ++ H      
Sbjct: 1   MGGSGRWLKSLISL-RKPSTIDQEKGGDKSKRKWKLWKSTSEGFGIGSSMQKGHGGGGSF 59

Query: 59  SDSDDAFGAAMATVVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIF 118
              D AF AA+A VVR   KDF +I+QEWAAIRIQ  FRG LARRA RALKAVVRLQAIF
Sbjct: 60  VVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALKAVVRLQAIF 119

Query: 119 RGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEK 178
           RG QVRKQAAVTLRCMQALVRVQA+V+AR+VG + E ++       EHC++ DP  QAE+
Sbjct: 120 RGWQVRKQAAVTLRCMQALVRVQARVKARNVGNSQEGKSA-----GEHCNEADPVKQAEQ 174

Query: 179 GWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHR 238
           GWC IPGTVEEV+ KLQ+RQEGAIKR+R  AY  S+K+S    SPNSR  K V  +K+  
Sbjct: 175 GWCDIPGTVEEVKEKLQMRQEGAIKRDRTKAYSQSKKKSTERASPNSRAAKSVIPLKNRN 234

Query: 239 LDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYSCSSEQDSVK 298
           LD K  GW+ LD WMA KPW+SR + EM+ D  +MTP   KS+  +  F S   +  SVK
Sbjct: 235 LDSKSSGWNMLDLWMAAKPWESRSMVEMYLDSPDMTPVTSKSDHLVLPFNS-DQQNGSVK 293

Query: 299 VRRNNVNTKIIAKPPITTQITRSSSSPSSESLYDGTSPSTSSSSTSVTPISGNTLMMERA 358
            R N V T+I      T+Q T SSS+ SSE ++D +  STS +S S +  S N + +E  
Sbjct: 294 SRSNGVTTRISTNSLTTSQSTPSSSAISSECMHDDSPMSTSCTSGSPSRPSNNNVTVEAT 353

Query: 359 EESYYRKPSYMNLTRSIKAKQKASR-FCSPKKWMELSN-----GDDRSLADSEPSFNLCK 412
           EE    KPSYMNLT S KAK K  R F    K + + +     G  RS +   PS N  K
Sbjct: 354 EERNACKPSYMNLTASTKAKLKPYRCFSQNAKRIFMDDCVSLSGVTRSSSGFYPSANTWK 413

Query: 413 DLYPPIPLGRHDQLKY 428
           +LY   PL    Q +Y
Sbjct: 414 NLY-ATPLRTSYQKRY 428

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
TAIR|locus:2030225	414	iqd8 "AT1G72670" [Arabidopsis	0.679	0.707	0.385	2e-63
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.846	0.877	0.368	5.7e-59
TAIR|locus:2018837	371	IQD7 "AT1G17480" [Arabidopsis	0.491	0.571	0.374	9.8e-48
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.447	0.457	0.311	1e-26
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.436	0.407	0.283	2e-11
TAIR|locus:2200945	527	IQD18 "AT1G01110" [Arabidopsis	0.410	0.335	0.271	1.2e-09
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.410	0.331	0.285	5.4e-09
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.387	0.644	0.255	7e-09
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.385	0.631	0.252	2.3e-08
TAIR|locus:2139187	423	IQD16 "AT4G10640" [Arabidopsis	0.120	0.122	0.403	9.9e-08

TAIR|locus:2030225 iqd8 "AT1G72670" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
 Identities = 125/324 (38%), Positives = 167/324 (51%)

Query:     1 MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWXXXXXXXXXXXXXXXXXXXX--- 57
             MG SG W+KSL+T+ K   I D ++ N   KKKW+LW                       
Sbjct:     1 MGGSGNWIKSLITNKKN--ITDDQEKN--IKKKWKLWRTSSEGLISSSKGFKSRGGSYGT 56

Query:    58 --------XXXXXXXXXXXXXTVVRALPKDFRLIRQEWAAIRIQTXXXXXXXXXXXXXXX 109
                                   V+RA PKDF L+++EWAA RIQ                
Sbjct:    57 PSLGSDPPSFSADDSFTAAVAAVIRAPPKDFFLVKREWAATRIQAAFRAFLARQALRALK 116

Query:   110 XXXXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXXXXXXSVGMASEKQAMVHSLLDEHCSQ 169
                  QAIFRGRQVRKQA VTLRCM                  S+ Q +     D+   +
Sbjct:   117 AVVRIQAIFRGRQVRKQADVTLRCMQALVRVQARVRAHCNRGPSDGQEL-EKPSDQQ--K 173

Query:   170 VDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNK 229
              DP  QAEKGWC  PG++ EVRTKLQ+RQEGAIKRERA+ Y L+  Q R+CPSP ++ +K
Sbjct:   174 DDPAKQAEKGWCDSPGSINEVRTKLQMRQEGAIKRERAMVYALTH-QPRTCPSP-AKASK 231

Query:   230 PVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSRLLEEMHSDPSEMTPFYRKSEDNIFGFYS 289
                  K++   K   GW+WLD W+A +PW+ RL+E     P+  +   RKSE ++     
Sbjct:   232 QGSVKKNNGSCKSSPGWNWLDRWVADRPWEGRLME----GPTNSSENARKSESSV----- 282

Query:   290 CSSEQDSVKVRRNNVNTKIIAKPP 313
               SE D+V+VR+NN+ T+++A+PP
Sbjct:   283 --SEHDTVQVRKNNLTTRVLARPP 304

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 142/385 (36%), Positives = 190/385 (49%)

Query:     1 MGVSGKWLKSLVTHSKKPQIADHEKVNDKTKKKWRLWXXXXXXXXXXXXXXXXXXXXXXX 60
             MG SGKW+KS++   KK +  + EK N K KK W+LW                       
Sbjct:     1 MGASGKWVKSIIG-LKKLEKDEIEKGNGKNKK-WKLWRTTSVDSWKGFRGKHRSDSDGVD 58

Query:    61 XXXXXXXXXXTVVRALPKDFRLIRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRG 120
                       TV+RA PKDF+ +R+EWAAIRIQT                    QA+ RG
Sbjct:    59 SSTVYSAAVATVLRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRG 118

Query:   121 RQVRKQAAVTLRCMXXXXXXXXXXXXXSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGW 180
             RQVRKQAAVTLRCM              V M  E QA V  LLDEH ++ D   + E+GW
Sbjct:   119 RQVRKQAAVTLRCMQALVRVQARVRARRVRMTVEGQA-VQKLLDEHRTKSDLLKEVEEGW 177

Query:   181 CAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLD 240
             C   GTV+++++KLQ RQEGA KRERA+AY L+QKQ RS  S N +TN  +  +K    D
Sbjct:   178 CDRKGTVDDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFD 237

Query:   241 KKGQGWSWLDSWMAIKPWDSRLLEEMHS--DPSEMTPFYRKSEDNIFGFYSCSSEQDSVK 298
             K   GWSWL+ WMA +PW++RL++ + +   P  +   + KS +            D V+
Sbjct:   238 KNSWGWSWLERWMAARPWETRLMDTVDTAATPPPLPHKHLKSPETA----------DVVQ 287

Query:   299 VRRNNVNTKIIAKPPITTQITRXXXXXXXXXLYDGXXXXXXXXXXXXXXXXGNTLMMERA 358
             VRRNNV T++ AKPP                  +                    +    +
Sbjct:   288 VRRNNVTTRVSAKPP-----PHMLSSSPGYEFNESSGSSSICTSTTPVSGKTGLVSDNSS 342

Query:   359 EESYYRKPSYMNLTRSIKAKQKASR 383
              ++   KPSYM+LT S KAK++ +R
Sbjct:   343 SQAKKHKPSYMSLTESTKAKRRTNR 367

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2018837 IQD7 "AT1G17480" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
 Identities = 88/235 (37%), Positives = 120/235 (51%)

Query:     1 MGVSGKWLKSLVTHSKKPQIADHEKVNDKT-KKKWRLWXXXXXXXXXXXXXXXXXXXXXX 59
             MG SG W++SL+++ +KP     EK++DK+ KKKW+LW                      
Sbjct:     1 MGGSGNWIRSLISN-RKPVNDQQEKLSDKSSKKKWKLWRISSESLASSSFKSRGSYAASS 59

Query:    60 --------XXXXXXXXXXXTVVRALPKDFRLIRQEWAAIRIQTXXXXXXXXXXXXXXXXX 111
                                 ++RA P+DF ++++EWA+ RIQ                  
Sbjct:    60 LGSELPSFSADEAFTTAMAALIRAPPRDFLMVKREWASTRIQAAFRAFLARQAFRALKAV 119

Query:   112 XXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXXXXXXSVGMASEKQAMVHSLLDEHCSQVD 171
                QAIFRGRQVRKQAAVTLRCM                + + ++A   SL        D
Sbjct:   120 VRIQAIFRGRQVRKQAAVTLRCMQALVRVQSR-------VRAHRRAPSDSL-----ELKD 167

Query:   172 PTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSR 226
             P  Q EKGWC  P +++EV+TKLQ++QEGAIKRERA+ Y L+  QSR+CPSP+ R
Sbjct:   168 PVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIKRERAMVYALTH-QSRTCPSPSGR 221

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 63/202 (31%), Positives = 96/202 (47%)

Query:    84 RQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXX 143
             R+  AA RIQT                    QA+ RG  VRKQAAVTLRCM         
Sbjct:    86 RENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQAR 145

Query:   144 XXXXSVGMASEKQAMV-HSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAI 202
                  V +A E ++      L +  +      + E+GWC   G+VE+++ KL  RQE A 
Sbjct:   146 VRARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAA 205

Query:   203 KRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSRL 262
             KRERA+AY L+ +             + + +    + DK   GW+WL+ WMA++PW++R 
Sbjct:   206 KRERAMAYALTHQWQAG--------TRLLSAHSGFQPDKNNWGWNWLERWMAVRPWENRF 257

Query:   263 LEEMHSDPSEMTPFYRKSEDNI 284
             L+    D +++     +  +N+
Sbjct:   258 LDSNLRDDAKLGENGMEQSENV 279

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
 Identities = 57/201 (28%), Positives = 87/201 (43%)

Query:    72 VVRALPKDFR-LIRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVT 130
             V RA P  F     +E AAI IQT                    + +  G  V++QAA T
Sbjct:   100 VRRATPTRFAGKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANT 159

Query:   131 LRCMXXXXXXXXXXXXXSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEV 190
             L+CM              + M+ E QA    LL +H  ++      +  W     + E+V
Sbjct:   160 LKCMQTLSRVQSQIRARRIRMSEENQARQKQLLQKHAKELAGLKNGDN-WNDSIQSKEKV 218

Query:   191 RTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQ--GWSW 248
                L  + E  ++RERA+AY  S +Q+      NS++  P+       +D      GWSW
Sbjct:   219 EANLLSKYEATMRRERALAYSYSHQQNWK---NNSKSGNPMF------MDPSNPTWGWSW 269

Query:   249 LDSWMAIKPWDSRLLEEMHSD 269
             L+ WMA +P +S   E+ +S+
Sbjct:   270 LERWMAGRPLESSEKEQSNSN 290

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2200945 IQD18 "AT1G01110" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 54/199 (27%), Positives = 85/199 (42%)

Query:    77 PKDFRLIRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCMXX 136
             P+     R+ +AA+ IQT                    QA+ RG  VRKQA +TLRCM  
Sbjct:   112 PRRIYYARENYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQA 171

Query:   137 XXXXXXXXXXXSVGMA---SEKQAMV--HSLLDEHCSQ--VDPTTQAEKG------WCAI 183
                           ++   S K A    H++ +    Q   D  + + +G      W   
Sbjct:   172 LVRVQSRVLDQRKRLSHDGSRKSAFSDSHAVFESRYLQDLSDRQSMSREGSSAAEDWDDR 231

Query:   184 PGTVEEVRTKLQLRQEGAIKRERA-IAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKK 242
             P T++ V+  LQ R++ A++ ++  ++   SQK  R+    N  T        HH ++ +
Sbjct:   232 PHTIDAVKVMLQRRRDTALRHDKTNLSQAFSQKMWRTVG--NQSTEG------HHEVELE 283

Query:   243 GQGWSWLDSWMAIKPWDSR 261
              +   WLD WMA +PWD R
Sbjct:   284 EERPKWLDRWMATRPWDKR 302

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 57/200 (28%), Positives = 83/200 (41%)

Query:    84 RQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXX 143
             R+++AA+ IQT                    QA+ RG  VRKQA +TLRCM         
Sbjct:   130 REDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSR 189

Query:   144 XXXXSVGMA---SEKQAM--VHSLLDEHCSQV--DPTTQAEKG------WCAIPGTVEEV 190
                    ++   S K A     S+L+    Q   D  + + +G      W   P T+EEV
Sbjct:   190 VLDQRKRLSHDGSRKSAFSDTQSVLESRYLQEISDRRSMSREGSSIAEDWDDRPHTIEEV 249

Query:   191 RTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLD 250
             +  LQ R++ A++RE   +  +SQ  S        RT     +   +  ++      WLD
Sbjct:   250 KAMLQQRRDNALRRESNNS--ISQAFSHQV----RRTRGSYSTGDEYEEERP----KWLD 299

Query:   251 SWMAIKPWDSRLLEEMHSDP 270
              WMA KPWD R   +    P
Sbjct:   300 RWMASKPWDKRASTDQRVPP 319

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 7.0e-09, P = 7.0e-09
 Identities = 45/176 (25%), Positives = 71/176 (40%)

Query:    86 EWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXXXX 145
             E A IRIQ                      ++ +G  V  Q +  L  +           
Sbjct:    50 EVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVMNQTSTALNVIHSWYDIQNQIR 109

Query:   146 XXSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRE 205
                + M ++ + + H  L+          + E  WC    T+EE+  K+Q ++E  +KRE
Sbjct:   110 ARRLYMVTQGR-LQHKRLENRLKLEIKLHELEVEWCGGSETMEEILAKIQQKEEATVKRE 168

Query:   206 RAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSR 261
             RA+AY  S  Q R+    N+       S     L K+  GWSW + W+A +PW+ R
Sbjct:   169 RAMAYAFSH-QWRA----NATQYLGQASFN---LGKESWGWSWKERWIAARPWEIR 216

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 45/178 (25%), Positives = 73/178 (41%)

Query:    85 QEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCMXXXXXXXXXX 144
             ++WAA RIQT                    +     + V+ QA VTLR +          
Sbjct:    46 EDWAATRIQTAFKAYKARKSLRRLKGIARAKLSTEKQSVKNQAVVTLRYLHSWSKIQSEI 105

Query:   145 XXXSVGMASEKQAMVHSLLDEHCSQVDPTTQ-AEKGWCAIPGTVEEVRTKLQLRQEGAIK 203
                 V M +E +     L  EH  +++      E  W     T +E+  ++  R+E  IK
Sbjct:   106 KARRVCMVTEWRLKNKRL--EHQQKLEAKLHDVEVEWNGGSETKDEILERILQREEATIK 163

Query:   204 RERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKKGQGWSWLDSWMAIKPWDSR 261
             RERA+AY  S +        + +T    + +  + L     GWSW + W++ +PW+ R
Sbjct:   164 RERALAYAFSHQWKA-----DGKT----QWLGSYELGNTNWGWSWKERWISARPWEVR 212

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2139187 IQD16 "AT4G10640" [Arabidopsis thaliana (taxid:3702)]

 Score = 91 (37.1 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
 Identities = 21/52 (40%), Positives = 25/52 (48%)

Query:    83 IRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQAIFRGRQVRKQAAVTLRCM 134
             IR+ WAAI IQT                    QA+ RG  VR QA +TLRC+
Sbjct:    97 IRRHWAAIIIQTAFRGYLSRRALRALKGIVKLQALVRGNNVRNQAKLTLRCI 148

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_III000183 hypothetical protein (443 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	431
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.83
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.82
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.3
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	97.13
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	96.7
PTZ00014	821	myosin-A; Provisional	96.68
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.66
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	95.57
COG5022	1463	Myosin heavy chain [Cytoskeleton]	95.52
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	95.07
smart00015	26	IQ Short calmodulin-binding motif containing conse	92.39
PTZ00014	821	myosin-A; Provisional	92.37
KOG2128	1401	consensus Ras GTPase-activating protein family - I	90.7
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	86.97
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	80.62

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.83  E-value=2.2e-05  Score=49.24  Aligned_cols=21  Identities=48%  Similarity=0.718  Sum_probs=18.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 014055           86 EWAAIRIQTAFRGLLARRAFR  106 (431)
Q Consensus        86 e~AAI~IQsafRgylARRa~r  106 (431)
                      +.|||+||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            468999999999999999884

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.82  E-value=6.8e-05  Score=84.46  Aligned_cols=68  Identities=31%  Similarity=0.287  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055           81 RLIRQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus        81 ~~~ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      .......+++.||+.||+|+.|+.| +.+++++.||+++||+++|+   .++ ...|++.||..+|++..|..
T Consensus       668 R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~---~~~-~~~aai~~q~~~r~~~~r~~  736 (862)
T KOG0160|consen  668 RSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARR---ETE-REAAAIGIQKECRSYLNRRR  736 (862)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH---hhH-HHHHHHHhHHHHHHHHHHHH
Confidence            3445678889999999999999999 88999999999999999998   223 66667777777777766654

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.30  E-value=0.00022  Score=46.82  Aligned_cols=21  Identities=52%  Similarity=0.730  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 014055           85 QEWAAIRIQTAFRGLLARRAF  105 (431)
Q Consensus        85 ee~AAI~IQsafRgylARRa~  105 (431)
                      ++.||++||+.||||++|+.|
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            478999999999999999988

Calmodulin-binding motif.

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=97.13  E-value=0.00032  Score=60.40  Aligned_cols=18  Identities=50%  Similarity=0.652  Sum_probs=17.1

Q ss_pred             CCCCcchhhhHHHhhhhc
Q 014055          365 KPSYMNLTRSIKAKQKAS  382 (431)
Q Consensus       365 ~psYM~~T~SakAk~r~~  382 (431)
                      .|+||+.|||+|||+|..
T Consensus        34 ~PsYMa~TeSakAK~Rsq   51 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQ   51 (102)
T ss_pred             CCCccchhhhhhhhhhcc
Confidence            999999999999999984

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=96.70  E-value=0.0069  Score=68.76  Aligned_cols=68  Identities=28%  Similarity=0.269  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055           82 LIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus        82 ~~ree~AAI~IQsafRgylARRa~ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ..+...+++.||+.+||+++|+......+.+.+|..+|+++.|+++   .....+++.||+.+|+..+|..
T Consensus       692 f~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~e  759 (862)
T KOG0160|consen  692 FLQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARNE  759 (862)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccc
Confidence            4567899999999999999998444567789999999999999999   6678899999999999999983

>PTZ00014 myosin-A; Provisional

Probab=96.68  E-value=0.0037  Score=70.90  Aligned_cols=41  Identities=20%  Similarity=0.249  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 014055           87 WAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        87 ~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa  127 (431)
                      ..++.||++||||++|+.| +.+.+++.||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4789999999999999999 6688999999999999998753

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.66  E-value=0.0011  Score=75.48  Aligned_cols=74  Identities=31%  Similarity=0.342  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhHHHHHHHHHHHHhhhchhhh
Q 014055           84 RQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTL-------RCMQALVRVQAQVRARSVGMASEK  155 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tL-------r~~qAavrIQa~vR~~rvR~~~e~  155 (431)
                      .-..||..||..||||+.|+.| -.+.-+|+||+.+||+.+|++|....       ...-++-++|+.+|++..+...|.
T Consensus       808 ~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~  887 (975)
T KOG0520|consen  808 SDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEE  887 (975)
T ss_pred             cchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhc
Confidence            3467999999999999999999 77789999999999999999986221       236678889999999998887665


Q ss_pred             HH
Q 014055          156 QA  157 (431)
Q Consensus       156 ~~  157 (431)
                      +.
T Consensus       888 ~~  889 (975)
T KOG0520|consen  888 QE  889 (975)
T ss_pred             cc
Confidence            44

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=95.57  E-value=0.059  Score=60.23  Aligned_cols=63  Identities=21%  Similarity=0.283  Sum_probs=43.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055           79 DFRLIRQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus        79 ~~~~~ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      +....+.-.-++.||++||||++|.+| +++..++.|+ ++|.+-++-          .+..||.++|+.+.+..
T Consensus       689 e~r~~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~ks----------~v~el~~~~rg~k~~r~  752 (1001)
T KOG0164|consen  689 EQRAERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLKS----------YVQELQRRFRGAKQMRD  752 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHhhhhccc
Confidence            334445567799999999999999999 5555555556 777554443          23467888888776543

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=95.52  E-value=0.032  Score=65.99  Aligned_cols=49  Identities=37%  Similarity=0.543  Sum_probs=38.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 014055           78 KDFRLIRQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQ  126 (431)
Q Consensus        78 ~~~~~~ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrq  126 (431)
                      .+.....-...++.||++|||++.||+| ++.+.+..+|.+.+|..+++.
T Consensus       737 E~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~  786 (1463)
T COG5022         737 EDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRL  786 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Confidence            4445556788999999999999999999 777777777777777666653

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=95.07  E-value=0.033  Score=34.78  Aligned_cols=19  Identities=37%  Similarity=0.546  Sum_probs=16.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 014055          109 KAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus       109 kgiVrLQAlvRG~lvRrqa  127 (431)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            5788899999999998876

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=92.39  E-value=0.15  Score=33.32  Aligned_cols=20  Identities=35%  Similarity=0.509  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 014055          108 LKAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus       108 lkgiVrLQAlvRG~lvRrqa  127 (431)
                      .+.++.||+.+||+++|+++
T Consensus         3 ~~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        3 TRAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            46788889999999888876

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=92.37  E-value=0.34  Score=55.39  Aligned_cols=41  Identities=24%  Similarity=0.323  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          109 KAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       109 kgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ..++.||+.+||++.|+.+   ++..+++++||+.+|++..++.
T Consensus       778 ~~~~~iq~~~r~~~~r~~~---~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKV---RKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence            4567899999999999998   5668899999999999988753

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=90.70  E-value=0.8  Score=54.56  Aligned_cols=68  Identities=28%  Similarity=0.403  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHhhhch
Q 014055           85 QEWAAIRIQTAFRGLLA---RRAF--RALKAVVRLQAIFRGRQVRKQAAVT----LRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus        85 ee~AAI~IQsafRgylA---RRa~--ralkgiVrLQAlvRG~lvRrqa~~t----Lr~~qAavrIQa~vR~~rvR~~  152 (431)
                      +....+-||.++|||+.   +..|  ...+-+|.+|++.||+++|+.+...    ..+|...+.||+.+|....|..
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~  640 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKD  640 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchH
Confidence            67788999999999994   2333  5678899999999999999987533    3579999999999999887754

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=86.97  E-value=1  Score=51.02  Aligned_cols=34  Identities=29%  Similarity=0.262  Sum_probs=28.0

Q ss_pred             HhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014055           72 VVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAF  105 (431)
Q Consensus        72 ~~~~~~~~~~~~ree~AAI~IQsafRgylARRa~  105 (431)
                      +.+......-..+.+.||+.||.++|||++|+.|
T Consensus        16 ~~qeREer~~qrrr~~aa~~iq~~lrsyl~Rkk~   49 (1096)
T KOG4427|consen   16 VSQEREERSYQRRREAAALFIQRVLRSYLVRKKA   49 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555556678899999999999999999998

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=80.62  E-value=3  Score=45.06  Aligned_cols=34  Identities=32%  Similarity=0.183  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014055           84 RQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAI  117 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa~ralkgiVrLQAl  117 (431)
                      +-..|||.||+.||+|.||..-+.+-...-+|++
T Consensus        15 raikaAilIQkWYRr~~ARle~rrr~twqIFqsl   48 (631)
T KOG0377|consen   15 RAIKAAILIQKWYRRYEARLEARRRCTWQIFQSL   48 (631)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHH
Confidence            4578999999999999999988766666667775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	431
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	1e-09
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	6e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-05
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	2e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	4e-06
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	6e-05
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	1e-04
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	3e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-04

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 84  RQEWAAIRIQTAFRGLLARRAFRALK-AVVRLQAIFRGRQVRKQAAVTLRCMQA 136
           +   A IRIQ   RG L R+ +  ++ A + +Q   RG Q R  A   LR  +A
Sbjct: 3   KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKA 55

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 16/53 (30%)

Query: 78  KDFRLIRQEWAAIRIQTAFRGLLARRAFRALKAVVRLQAIFRGRQVRKQAAVT 130
           K +  +++  AAI +Q   RG  AR   + L+              R +AA T
Sbjct: 22  KRYLCMQR--AAITVQRYVRGYQARCYAKFLR--------------RTKAATT 58

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 3e-08
 Identities = 61/432 (14%), Positives = 130/432 (30%), Gaps = 148/432 (34%)

Query: 72  VVRALPKDFRLIRQEWAAIRIQTAFRG-LLARRAFRALKAVVRLQ---AIFRGRQV-RKQ 126
           V   L  ++     ++    I+T  R   +  R +  ++   RL     +F    V R Q
Sbjct: 83  VEEVLRINY-----KFLMSPIKTEQRQPSMMTRMY--IEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 127 AAVTLRCMQALVRVQAQVRARSV---GMA-SEKQAMVHSLLDEHCSQVDPTTQAEKGWCA 182
             + LR  QAL+ ++    A++V   G+  S K  +   +   +                
Sbjct: 136 PYLKLR--QALLELR---PAKNVLIDGVLGSGKTWVALDVCLSY---------------- 174

Query: 183 IPGTVEEVRTKLQLRQEGAIKRERAIAYYLSQKQSRSCPSPNSRTNKPVKSIKHHRLDKK 242
                     K+Q + +  I       ++L+    ++C SP +   + ++ +  +++D  
Sbjct: 175 ----------KVQCKMDFKI-------FWLN---LKNCNSPETVL-EMLQKL-LYQIDPN 212

Query: 243 GQGWSWLDSWMAI-------KPWDSRLLEEMHSDPSEMTPFYRKS---EDNIFGFYSCSS 292
               S  D    I       +    RLL+            Y        N+        
Sbjct: 213 WT--SRSDHSSNIKLRIHSIQAELRRLLKS---------KPYENCLLVLLNV-------- 253

Query: 293 EQDSVKVRRNNVNTKIIAKPPITT---QITRSSSS-----PSSESLYDGTSPSTS----S 340
            Q++      N++ KI+    +TT   Q+T   S+      S +      +P        
Sbjct: 254 -QNAKAWNAFNLSCKIL----LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 341 SSTSVTP-------ISGNTL-----------MMERAEESYYRKPSYMNLTRSIKAK---- 378
                 P       ++ N              +   +   ++  +   LT  I++     
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD--NWKHVNCDKLTTIIESSLNVL 366

Query: 379 -----QKASRFCS--------PKK-----WMELSNGDDRSLADSEPSFNLCKDLYPPIPL 420
                +K     S        P       W ++   D   + +    ++L +       +
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426

Query: 421 GRHD-QLKYRRH 431
                 L+ +  
Sbjct: 427 SIPSIYLELKVK 438

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 12/140 (8%)

Query: 79  DFRLIRQEWAAIRIQTAFRGLLARRAFRALK-AVVRLQAIFRGRQVRKQAAVTLRCMQAL 137
             R  +   A IRIQ   RG L R+ +  ++ A + +Q   RG Q R  A   LR  +A 
Sbjct: 761 KIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATF-LRRTRAA 819

Query: 138 VRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLR 197
           + +Q   R   V    +        L              +G+         +R    + 
Sbjct: 820 IIIQKFQRMYVVRKRYQCMRDATIALQALL----------RGYLVRNKYQMMLREHKSII 869

Query: 198 QEGAIKRERAIAYYLSQKQS 217
            +  ++   A  +Y    ++
Sbjct: 870 IQKHVRGWLARVHYHRTLKA 889

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 78  KDFRLIRQEWAAIRIQTAFRGLLARRAFRALK-AVVRLQAIFRGRQVRKQAAVTLRCMQA 136
                +R+  AAI IQ   R  + R+ ++ ++ A + LQA+ RG  VR +  + LR    
Sbjct: 808 CYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR-EHK 866

Query: 137 LVRVQAQVRARSVGMASEKQ 156
            + +Q  VR     +   + 
Sbjct: 867 SIIIQKHVRGWLARVHYHRT 886

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 51.3 bits (123), Expect = 4e-07
 Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 10/140 (7%)

Query: 72  VVRALPKDFRLIRQEWAAIRIQTAFRGLLARRAFRALK---AVVRLQAIFRGRQVRKQAA 128
            +R      + +R   AAI IQ   RG  AR     L+   A + +Q   R   VRK+  
Sbjct: 777 TIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQ 836

Query: 129 VTLRC---MQALVRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPG 185
                   +QAL+R    VR +   M  E ++++   + +H           +   AI  
Sbjct: 837 CMRDATIALQALLR-GYLVRNKYQMMLREHKSII---IQKHVRGWLARVHYHRTLKAIVY 892

Query: 186 TVEEVRTKLQLRQEGAIKRE 205
                R  +  R+   +K E
Sbjct: 893 LQCCYRRMMAKRELKKLKIE 912

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 19/87 (21%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 80  FRLIRQEWAAIRIQTAFRGLLARRAFRA-LKAVVRLQAIFRGRQVRKQAAVTLRCMQALV 138
           ++++ +E  +I IQ   RG LAR  +   LKA+V LQ  +R    +++    L+ ++   
Sbjct: 858 YQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRE----LKKLKIEA 913

Query: 139 RVQAQVRARSVGMASEKQAMVHSLLDE 165
           R   + +   +G+ ++   +   + ++
Sbjct: 914 RSVERYKKLHIGLENKIMQLQRKIDEQ 940

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 16/133 (12%)

Query: 90  IRIQTAFRGLLARRAF----RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVR 145
            R     + +  ++A         ++  +Q+     +  K+        Q +  ++A   
Sbjct: 765 KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKGQEVSELEAIYN 823

Query: 146 ARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLRQEGAIKRE 205
           +    +   K+    +             + +  W A+    E+   +        +KR+
Sbjct: 824 SLQTKLRLIKREPFVAPAGL------TPNEIDSTWSAL----EKAEQEHAEALRIELKRQ 873

Query: 206 RAIAYYLSQKQSR 218
           + IA  L QK +R
Sbjct: 874 KKIAVLL-QKYNR 885

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 14/130 (10%), Positives = 32/130 (24%), Gaps = 13/130 (10%)

Query: 81  RLIRQEWAAIRIQTAFRGLLARRAFRAL---KAVVRLQAIFRGRQVRKQAAVTLRCMQAL 137
                  +   +Q+        +        + V  L+AI+   Q + +       +   
Sbjct: 782 ESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPA 841

Query: 138 VRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLR 197
                ++ +    +   +Q    +L  E   Q       +K            R   +L 
Sbjct: 842 GLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYN----------RILKKLE 891

Query: 198 QEGAIKRERA 207
                K    
Sbjct: 892 NWATTKSVYL 901

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 79  DFRLIRQEWAAIRIQTAFRGLLARRAFRALK----AVVRLQAIFRGRQVRKQAAVTLRCM 134
           + R  R        Q   RG L R+A++ L+     +  +Q   R   V +      +  
Sbjct: 772 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN----WQWW 827

Query: 135 QALVRVQA 142
           +   +V+ 
Sbjct: 828 KLYSKVKP 835

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 14/141 (9%), Positives = 39/141 (27%), Gaps = 11/141 (7%)

Query: 88  AAIRIQTAFRGLLARRAFRALKAVVR----------LQAIFRGRQVRKQAAVTLRCMQAL 137
              +     R     +     +A +           +Q+     +  K+        Q +
Sbjct: 765 EQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKGQEV 823

Query: 138 VRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLR 197
             ++A   +    +   K+    +      +++D T  A +           +  K Q +
Sbjct: 824 SELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKK 883

Query: 198 QEGAIKRERAIAYYLSQKQSR 218
               +++   I   L    + 
Sbjct: 884 IAVLLQKYNRILKKLENWATT 904

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 14/141 (9%), Positives = 34/141 (24%), Gaps = 13/141 (9%)

Query: 81  RLIRQEWAAIRIQTAFRGLLARRAFRAL---KAVVRLQAIFRGRQVRKQAAVTLRCMQAL 137
                  +   +Q+        +        + V  L+AI+   Q + +       +   
Sbjct: 790 ESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPA 849

Query: 138 VRVQAQVRARSVGMASEKQAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRTKLQLR 197
                ++ +    +   +Q    +L  E   Q       +K            R   +L 
Sbjct: 850 GLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYN----------RILKKLE 899

Query: 198 QEGAIKRERAIAYYLSQKQSR 218
                K     +       + 
Sbjct: 900 NWATTKSVYLGSNETGDSITA 920

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 29/146 (19%)

Query: 88  AAIRIQTAFRGLLARRAFRALK----AVVRLQAIFRGRQVRKQ-----AAVTLRCMQALV 138
             I  Q   RG LAR+AF   +    ++  +Q   R                +  +  + 
Sbjct: 794 VIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIXPLLKVT 853

Query: 139 RVQAQVRARSVGMASEK------QAMVHSLLDEHCSQVDPTTQAEKGWCAIPGTVEEVRT 192
           R + +++A+   +   K      +A +  L  +H          EK           ++ 
Sbjct: 854 RQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLC-----EEKNL---------LQE 899

Query: 193 KLQLRQEGAIKRERAIAYYLSQKQSR 218
           KLQ   E   + E       ++KQ  
Sbjct: 900 KLQAETELYAEAEEMRVRLAAKKQEL 925

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	431
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.17
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.81
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.81
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.78
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.32
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	97.8
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.59
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.54
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.46
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.36
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.23
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.22
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	97.09
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.95
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.55
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	95.23
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	93.41
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.14
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	89.49
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	88.93

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.17  E-value=8e-11  Score=89.21  Aligned_cols=54  Identities=35%  Similarity=0.431  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 014055           84 RQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALV  138 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAav  138 (431)
                      +.+.|||+||+.||||++|+.| +...+++.||+++||+++|+.+ ..++..+|++
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA~   57 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAAT   57 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCcc
Confidence            4678999999999999999999 7778999999999999999998 6677776664

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.81  E-value=1.2e-08  Score=115.46  Aligned_cols=70  Identities=33%  Similarity=0.381  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhchh
Q 014055           83 IRQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMAS  153 (431)
Q Consensus        83 ~ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~~  153 (431)
                      .+...||++||++||||++|+.| +.+.+++.||+++||+++|+++ ..++...|+++||+.||++.+|+..
T Consensus       765 ~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y  835 (1080)
T 2dfs_A          765 DKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRY  835 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHH
Confidence            34478999999999999999999 7788999999999999999988 6788899999999999999998763

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.81  E-value=9.1e-09  Score=116.48  Aligned_cols=72  Identities=26%  Similarity=0.307  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhchh
Q 014055           81 RLIRQEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMAS  153 (431)
Q Consensus        81 ~~~ree~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~~  153 (431)
                      ..+++..||++||++||||++|+.| +.+.+++.||+++||+++|+++ ..++...+++.||+.||++.+|...
T Consensus       811 ~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~~y  883 (1080)
T 2dfs_A          811 TFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARVHY  883 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHHHT
T ss_pred             cccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456788999999999999999999 7778899999999999999888 5566677888888888888877653

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.78  E-value=1.4e-08  Score=73.93  Aligned_cols=42  Identities=26%  Similarity=0.467  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHH
Q 014055           86 EWAAIRIQTAFRGLLARRAF-RALK--AVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        86 e~AAI~IQsafRgylARRa~-ralk--giVrLQAlvRG~lvRrqa  127 (431)
                      ..|||.||+.||||++|+.| ..++  +++.||+++||+++|+.+
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            36899999999999999999 3333  889999999999998865

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1.2e-06  Score=63.56  Aligned_cols=44  Identities=20%  Similarity=0.197  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          108 LKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       108 lkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      +.+++.||+.+||+++|+++ ..++...|++.||+.+||+.+|..
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~   46 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRAN   46 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHh
Confidence            57899999999999999998 667788899999999999998863

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=97.80  E-value=4.6e-05  Score=57.30  Aligned_cols=44  Identities=30%  Similarity=0.323  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhchh
Q 014055          107 ALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMAS  153 (431)
Q Consensus       107 alkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~~  153 (431)
                      ...+++.||+.+||+++|+.+   +....+++.||+.+||+.+|...
T Consensus         4 ~~~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~   47 (58)
T 2ix7_C            4 LRAACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYA   47 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            357889999999999999998   55567999999999999999763

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.59  E-value=4.8e-05  Score=51.78  Aligned_cols=22  Identities=41%  Similarity=0.551  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 014055           84 RQEWAAIRIQTAFRGLLARRAF  105 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa~  105 (431)
                      +|+.||++||.+||+|+.|+.+
T Consensus         4 ~Ee~aA~vIQrA~R~yl~rr~~   25 (31)
T 2l53_B            4 SEEVSAMVIQRAFRRHLLQRSL   25 (31)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            6899999999999999999875

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.54  E-value=4.3e-05  Score=50.51  Aligned_cols=21  Identities=38%  Similarity=0.540  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 014055           84 RQEWAAIRIQTAFRGLLARRA  104 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa  104 (431)
                      +|+.||++||.+||+|+.++.
T Consensus         4 ~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            4 QEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            689999999999999998864

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.46  E-value=0.00034  Score=53.73  Aligned_cols=42  Identities=21%  Similarity=0.228  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHH
Q 014055           85 QEWAAIRIQTAFRGLLARRAF-RA---LKAVVRLQAIFRGRQVRKQ  126 (431)
Q Consensus        85 ee~AAI~IQsafRgylARRa~-ra---lkgiVrLQAlvRG~lvRrq  126 (431)
                      ....++.||+++|||++|+.| +.   ..++..||..+|+++.++.
T Consensus         5 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            5 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            345677778888888877777 22   4556667777777776653

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.36  E-value=0.00032  Score=53.82  Aligned_cols=39  Identities=26%  Similarity=0.204  Sum_probs=22.4

Q ss_pred             HHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHH
Q 014055           87 WAAIRIQTAFRGLLARRAF-RA---LKAVVRLQAIFRGRQVRK  125 (431)
Q Consensus        87 ~AAI~IQsafRgylARRa~-ra---lkgiVrLQAlvRG~lvRr  125 (431)
                      ..++.||+++|||++|+.| +.   ..++..||..+|+++.++
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4566666666666666666 22   344455565555555544

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.23  E-value=0.00086  Score=51.46  Aligned_cols=46  Identities=24%  Similarity=0.138  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          107 ALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       107 alkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ...-++.||+.+||+++|+.+...+....|+..||..+|++..++.
T Consensus         5 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            5 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            3456889999999999999997777778888899999999988754

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.22  E-value=0.00078  Score=51.63  Aligned_cols=45  Identities=22%  Similarity=0.023  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          108 LKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       108 lkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ..-++.||+.+||+++|+.+...+....|+..||..+|++..++.
T Consensus         4 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~   48 (63)
T 2bl0_A            4 GEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN   48 (63)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            356789999999999999997777778888899999999988764

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=97.09  E-value=0.00077  Score=74.82  Aligned_cols=46  Identities=22%  Similarity=0.168  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHH
Q 014055           82 LIRQEWAAIRIQTAFRGLLARRAF-RA---LKAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        82 ~~ree~AAI~IQsafRgylARRa~-ra---lkgiVrLQAlvRG~lvRrqa  127 (431)
                      ..+...+|+.||++||||++|+.| +.   +.+++.||..+||+++|+..
T Consensus       775 ~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          775 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            345567899999999999999999 33   47889999999999998865

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.95  E-value=0.0085  Score=68.44  Aligned_cols=43  Identities=28%  Similarity=0.336  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHH
Q 014055           84 RQEWAAIRIQTAFRGLLARRAF-RA---LKAVVRLQAIFRGRQVRKQ  126 (431)
Q Consensus        84 ree~AAI~IQsafRgylARRa~-ra---lkgiVrLQAlvRG~lvRrq  126 (431)
                      +...+|+.||++||||++|+.| +.   ..+++.||+.+||++.++.
T Consensus       790 ~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          790 KITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4457899999999999999999 32   4689999999999999875

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.55  E-value=0.016  Score=52.15  Aligned_cols=34  Identities=21%  Similarity=0.403  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 014055           85 QEWAAIRIQTAFRGLLARRAFRA-LKAVVRLQAIF  118 (431)
Q Consensus        85 ee~AAI~IQsafRgylARRa~ra-lkgiVrLQAlv  118 (431)
                      ...|+|+||+++||||+|+.++- ..|++++.+|.
T Consensus        44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            57889999999999999999944 47887777765

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=95.23  E-value=0.038  Score=61.42  Aligned_cols=47  Identities=26%  Similarity=0.168  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          106 RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       106 ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      +....++.||+.+||+++|+++...+....|++.||+.+|++..++.
T Consensus       777 ~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~  823 (837)
T 1kk8_A          777 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  823 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            44567889999999999999995544557899999999999998764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=93.41  E-value=0.14  Score=58.53  Aligned_cols=47  Identities=21%  Similarity=0.209  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          106 RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       106 ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      +....++.||+.+||+++|+.+...+....|++.||+.||++..++.
T Consensus       790 ~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          790 KITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            44467889999999999999996555567899999999999988754

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.14  E-value=0.19  Score=46.07  Aligned_cols=28  Identities=36%  Similarity=0.494  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014055           80 FRLIRQEWAAIRIQTAFRGLLARRAFRA  107 (431)
Q Consensus        80 ~~~~ree~AAI~IQsafRgylARRa~ra  107 (431)
                      ....+++.||++||.+||.|+.|+.++.
T Consensus       124 ~~~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          124 LRRKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            4456899999999999999999888743

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=89.49  E-value=0.25  Score=54.72  Aligned_cols=26  Identities=35%  Similarity=0.521  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014055           83 IRQEWAAIRIQTAFRGLLARRAFRAL  108 (431)
Q Consensus        83 ~ree~AAI~IQsafRgylARRa~ral  108 (431)
                      .+...+|++||++||||++|+.|+.+
T Consensus       765 ~~l~~~~~~iQ~~~Rg~l~R~~~~~~  790 (795)
T 1w7j_A          765 DKLRAACIRIQKTIRGWLMRKKYMRM  790 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567899999999999999999433

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=88.93  E-value=0.41  Score=54.58  Aligned_cols=42  Identities=10%  Similarity=0.065  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 014055           85 QEWAAIRIQTAFRGLLARRAF-RALKAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        85 ee~AAI~IQsafRgylARRa~-ralkgiVrLQAlvRG~lvRrqa  127 (431)
                      ...+|+.||. +|||++|++| +.+.+++.+|.+.|+...|+..
T Consensus       774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~  816 (1052)
T 4anj_A          774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA  816 (1052)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            4677888885 7999999999 7788889999988887766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	431
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-06
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	1e-05

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 79  DFRLIRQEWAAIRIQTAFRGLLARRAFRAL----KAVVRLQAIFRGRQVRKQAAVTLRCM 134
           + R  +        Q   RG L R  +RA+    +++  +Q   R     K        M
Sbjct: 728 EMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK----HWPWM 783

Query: 135 QALVRVQAQVR 145
           +   +++  ++
Sbjct: 784 KLFFKIKPLLK 794

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 79  DFRLIRQEWAAIRIQTAFRGLLARRAFRALK----AVVRLQAIFRGRQVRK 125
           + R  R        Q   RG L R+A++ L+     +  +Q   R   V +
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 774

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	431
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.44
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.32
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	95.97
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	94.78
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	90.38

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.44  E-value=8.1e-05  Score=79.39  Aligned_cols=45  Identities=18%  Similarity=0.104  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHH
Q 014055           83 IRQEWAAIRIQTAFRGLLARRAF-RA---LKAVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        83 ~ree~AAI~IQsafRgylARRa~-ra---lkgiVrLQAlvRG~lvRrqa  127 (431)
                      .....+||.||++||||++|+.| +.   +.+++.||+.+||+++||.+
T Consensus       732 ~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         732 DKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            44578999999999999999999 32   56899999999999998876

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.32  E-value=0.00018  Score=76.56  Aligned_cols=45  Identities=24%  Similarity=0.272  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHH
Q 014055           83 IRQEWAAIRIQTAFRGLLARRAFRAL-K---AVVRLQAIFRGRQVRKQA  127 (431)
Q Consensus        83 ~ree~AAI~IQsafRgylARRa~ral-k---giVrLQAlvRG~lvRrqa  127 (431)
                      .....+|+.||++||||++|+.|+.+ .   +++.||+.+||+++||.+
T Consensus       728 ~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         728 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            34577999999999999999999433 2   688999999999999866

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=95.97  E-value=0.0069  Score=64.16  Aligned_cols=47  Identities=17%  Similarity=0.118  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          106 RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       106 ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ...+.++.||+.+||+++|+++...+....|++.||+.+|++..|+.
T Consensus       733 ~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~  779 (794)
T d2mysa2         733 KLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH  779 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44567889999999999999996656667899999999999988764

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=94.78  E-value=0.028  Score=59.36  Aligned_cols=47  Identities=26%  Similarity=0.168  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhch
Q 014055          106 RALKAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAQVRARSVGMA  152 (431)
Q Consensus       106 ralkgiVrLQAlvRG~lvRrqa~~tLr~~qAavrIQa~vR~~rvR~~  152 (431)
                      ...+.++.||+.+||+++|+++........|++.||+.+|++.+|+.
T Consensus       729 ~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~  775 (789)
T d1kk8a2         729 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  775 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            34567889999999999999984332345578899999999998864

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=90.38  E-value=0.11  Score=53.91  Aligned_cols=25  Identities=36%  Similarity=0.497  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014055           82 LIRQEWAAIRIQTAFRGLLARRAFR  106 (431)
Q Consensus        82 ~~ree~AAI~IQsafRgylARRa~r  106 (431)
                      ......+||+||++||||++||.|.
T Consensus       702 ~~~l~~~~~~iQ~~~R~~l~Rk~~~  726 (730)
T d1w7ja2         702 ADKLRAACIRIQKTIRGWLMRKKYM  726 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445678999999999999999883