Citrus Sinensis ID: 014059

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
MPSNYFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALSDPSQSSVSGNCQKKLMAASASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKISAGKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
cccHHHHHHHHHHHcccccccccccccccccHHHEEEcccEEEEEEcccccccccEEEcccccEEEEcccccccccccccEEEEEEEccccccccccccEEEccEEEEcccccccccccccccccHHHHcccccEEEEcHHccccccccccccccEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccccccccccEEEEEccccEEEEcccEEEEcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccEEEEEEcccccEEEEccccEEEEEEccEEEEEccccEEcccccEEcccccccccccccccccEEEEccccccccEEEEEEEEEEEc
cccHHHHHHHHHHHccccccEccccccccccEEEEEEEccccEEEEcccccHHHcEEEEccccEEEcccccEHHcccccEEEEEccccccccccccHHHHHHHccccccccccccccccccccccccccccccccEEEcccEEccccccccccccccccccccccccEEEEEEEEccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccEEcccccccccccccEEEEEcccEEEEEcccccHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccEEEEEEEcccEEEEEEEccccEEEEEccEEEEEcccccccccccEEcccccccccHHHcccccEEEEEcccccccEEEEEEEcHccc
MPSNYFSRLRTVLQngtqrpllgqegvirDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQkrnlsvvgaisrpfsvpsvsgpsfqvcgyhidralsdpsqssvsgnCQKKLMAASASKAVSVDYltsrsgqcslstnnAAVSYVIRSVEGCRRATMSlksskqsnnhlfHGYFICNFAKRwfnffpqidaglrcfhslspasfsagtvpdvsfdsasreeqlgtsaasseQKISAGktlkllsgacclphpdkeetggedahfisdkQAIGVAdgvggwanhgvnaGLYSRELMSNSVAAiqeepdgsidparVLEKAhsstrakgssTACIIALTDQGlrainlgdSGFVVVRdgctvfrspvqqhdfnftyqleygsnsdlpssgqvgsfifpcahhfsqNLYIFLRVGLFAV
MPSNYFSRLRTVLQngtqrpllgqegVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALSDPSQSSVSGNCQKKLMAASASKAVSVDYLTSrsgqcslstnnaaVSYVIRSVEGCRRATMSlksskqsnnHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSFDSASREEQLgtsaasseqkISAGKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQeepdgsidpARVLEKAHsstrakgsstACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
MPSNYFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAIsrpfsvpsvsgpsfqvCGYHIDRALSDPSQSSVSGNCQKKLMAASASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKISAGKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
********LRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDR****************************VDYLT****QCSLSTNNAAVSYVIRSVEGCRRA***********NHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSP**************************************LKLLSGACCL*************HFISDKQAIGVADGVGGWANHGVNAGLYSREL***********************************TACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLF**
***NYFS*LRT********************VELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRA*************************VSVDYLTSRS*************************************HLFHGYFICNFAK*************************************************************LLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
MPSNYFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALS*************KLMAASASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSF********************SAGKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARV*************STACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
****YFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALS**********************AVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASF********************************GKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
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MPSNYFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFGLGNYRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALSDPSQSSVSGNCQKKLMAASASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKISAGKTLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query431 2.2.26 [Sep-21-2011]
Q9SUK9467 Probable protein phosphat yes no 0.856 0.790 0.526 1e-101
Q9LVQ8414 Probable protein phosphat no no 0.568 0.591 0.532 5e-63
Q339D2465 Probable protein phosphat no no 0.338 0.313 0.476 3e-27
Q10QL5569 Probable protein phosphat no no 0.331 0.251 0.465 8e-26
Q6J2K6569 Probable protein phosphat N/A no 0.331 0.251 0.465 9e-26
O64730298 Probable protein phosphat no no 0.315 0.456 0.4 7e-23
Q93V88724 Probable protein phosphat no no 0.352 0.209 0.411 4e-22
Q942P9 331 Probable protein phosphat no no 0.310 0.404 0.427 1e-21
B4M5T5313 Protein phosphatase PTC7 N/A no 0.271 0.373 0.453 4e-19
B4K616312 Protein phosphatase PTC7 N/A no 0.271 0.375 0.457 5e-19
>sp|Q9SUK9|P2C55_ARATH Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana GN=At4g16580 PE=2 SV=2 Back     alignment and function desciption
 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/408 (52%), Positives = 261/408 (63%), Gaps = 39/408 (9%)

Query: 28  IRDSVELLFGLGN-----YRFLHSLRFSTLSDLHVLLRPGTIFAARSDLLLANQKRNLSV 82
           ++  V++L GLGN     YR L++ RF+  +        G +  A SDLLL N++RNLSV
Sbjct: 8   LQKQVKILIGLGNLGFGGYRGLYT-RFTNPN--------GFLEPASSDLLLINERRNLSV 58

Query: 83  VGAISRPFSVPSVSGPSFQVCGYHIDRALSDPSQSSVSGNCQKKLMAASASKAVSVDYLT 142
           +GA+SR FSVPSVSGP+FQVCGYHID  LSDP +S          MA+  SK++ VD  +
Sbjct: 59  IGAVSRTFSVPSVSGPAFQVCGYHIDLLLSDPCKS----------MASLGSKSLFVDRHS 108

Query: 143 SRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSNNHLFHGYFICNFAKRWFNFFP 202
           +     SL +       V        R +M L+    +       YF    AKRW     
Sbjct: 109 A-----SLVSKRFTGGMVSGDGPNRGRISMRLRGKDHNEKSTICAYFAYRGAKRWIYLNQ 163

Query: 203 QIDA-GLRCFHSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKISAGKTLKLLSGA 261
           Q    G R  HS      SAG  PDVS D++  +EQ+  S+ S   K+   K LKL+SG+
Sbjct: 164 QRRGMGFRGLHSSLSNRLSAGNAPDVSLDNSVTDEQVRDSSDSVAAKLCT-KPLKLVSGS 222

Query: 262 CCLPHPDKEETGGEDAHFI-SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEE 320
           C LPHPDKE TGGEDAHFI +++QA+GVADGVGGWA  G++AG YSRELMSNSV AIQ+E
Sbjct: 223 CYLPHPDKEATGGEDAHFICAEEQALGVADGVGGWAELGIDAGYYSRELMSNSVNAIQDE 282

Query: 321 PDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPV 380
           P GSIDPARVLEKAH+ T+++GSSTACIIALT+QGL AINLGDSGF+VVR+G TVFRSPV
Sbjct: 283 PKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINLGDSGFMVVREGHTVFRSPV 342

Query: 381 QQHDFNFTYQLEYGSNSDLPSSGQV-------GSFIFPCAHHFSQNLY 421
           QQHDFNFTYQLE G N DLPSSGQV       G  I         NLY
Sbjct: 343 QQHDFNFTYQLESGRNGDLPSSGQVFTVAVAPGDVIIAGTDGLFDNLY 390

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LVQ8|P2C80_ARATH Probable protein phosphatase 2C 80 OS=Arabidopsis thaliana GN=At5g66720 PE=2 SV=1 Back     alignment and function description
>sp|Q339D2|P2C71_ORYSJ Probable protein phosphatase 2C 71 OS=Oryza sativa subsp. japonica GN=Os10g0370000 PE=2 SV=1 Back     alignment and function description
>sp|Q10QL5|BIP2C_ORYSJ Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa subsp. japonica GN=BIPP2C1 PE=2 SV=1 Back     alignment and function description
>sp|Q6J2K6|BIP2C_ORYSI Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa subsp. indica GN=BIPP2C1 PE=2 SV=1 Back     alignment and function description
>sp|O64730|P2C26_ARATH Probable protein phosphatase 2C 26 OS=Arabidopsis thaliana GN=At2g30170 PE=2 SV=2 Back     alignment and function description
>sp|Q93V88|P2C62_ARATH Probable protein phosphatase 2C 62 OS=Arabidopsis thaliana GN=At4g33500 PE=2 SV=1 Back     alignment and function description
>sp|Q942P9|P2C01_ORYSJ Probable protein phosphatase 2C 1 OS=Oryza sativa subsp. japonica GN=Os01g0164600 PE=2 SV=1 Back     alignment and function description
>sp|B4M5T5|PTC71_DROVI Protein phosphatase PTC7 homolog fig OS=Drosophila virilis GN=fig PE=3 SV=1 Back     alignment and function description
>sp|B4K616|PTC71_DROMO Protein phosphatase PTC7 homolog fig OS=Drosophila mojavensis GN=fig PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
255538578512 protein phosphatase 2c, putative [Ricinu 0.953 0.802 0.661 1e-158
225458346519 PREDICTED: probable protein phosphatase 0.948 0.788 0.621 1e-136
224136550444 predicted protein [Populus trichocarpa] 0.809 0.786 0.675 1e-129
356552130506 PREDICTED: probable protein phosphatase 0.939 0.800 0.591 1e-128
356564255506 PREDICTED: probable protein phosphatase 0.939 0.800 0.591 1e-128
359476721500 PREDICTED: probable protein phosphatase 0.925 0.798 0.531 1e-107
297800460467 hypothetical protein ARALYDRAFT_493218 [ 0.858 0.792 0.531 1e-100
42566875467 putative protein phosphatase 2C 55 [Arab 0.856 0.790 0.526 3e-99
297735191332 unnamed protein product [Vitis vinifera] 0.556 0.722 0.670 8e-85
255568271416 protein phosphatase 2c, putative [Ricinu 0.679 0.704 0.561 6e-83
>gi|255538578|ref|XP_002510354.1| protein phosphatase 2c, putative [Ricinus communis] gi|223551055|gb|EEF52541.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 280/423 (66%), Positives = 336/423 (79%), Gaps = 12/423 (2%)

Query: 1   MPSNYFSRLRTVLQNGTQRPLLGQEGVIRDSVELLFG-----LGNYRFLHSLRFSTLSDL 55
           MPS YFSRLRT  QN  +R ++GQE   +DS E+L G       NYR  HS+R ++L+++
Sbjct: 1   MPSTYFSRLRTAAQNEIRRSVVGQERGFQDSAEILIGQLKSRFCNYRLFHSVRIASLAEI 60

Query: 56  HVLLRPGTIFAARSDLLLANQKRNLSVVGAISRPFSVPSVSGPSFQVCGYHIDRALSDPS 115
             LL PGT+FAA+SDL L N+KRN+SVVGA+SR FSVPSVSGPSFQVCGYHIDRALS  +
Sbjct: 61  QALLGPGTVFAAQSDLQLVNRKRNISVVGALSRTFSVPSVSGPSFQVCGYHIDRALSGTT 120

Query: 116 QSSVSGNCQKKLMAASASKAVS----VDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRAT 171
           Q S SG  QK+LMAA ASK+V     ++ L SR G   +STNNA++SY  RS + CR  +
Sbjct: 121 QVSDSGKLQKRLMAACASKSVIGGCLLENLNSRGGHLPISTNNASISYGSRSSQSCRIIS 180

Query: 172 MSLKSSKQSNNHLFHGYFICNFAKRWFNFFPQIDAGLRCFHSLSPASFSAGTVPDVSFDS 231
           MSLK  +QS+N   +GYF+CN  K+W++F   I++G R  HS SPA  SAGT PDV+F++
Sbjct: 181 MSLKKEEQSSNFPIYGYFVCNVMKKWYSFSSYIESGARFLHSSSPACLSAGTAPDVTFEN 240

Query: 232 ASREEQLGTSAASSEQKISAGKTLKLLSGACCLPHPDKEETGGEDAHFI-SDKQAIGVAD 290
           + REEQL TS  SSE+KIS+GK LKL+SG+C LPHPDKEETGGEDAHFI +D+QAIGVAD
Sbjct: 241 SGREEQLETSTVSSEEKISSGKILKLISGSCYLPHPDKEETGGEDAHFICTDEQAIGVAD 300

Query: 291 GVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIA 350
           GVGGWA+HGV++G YSRELMS+SV AI++EP  S+DPARVLEKAHSST+AKGSSTACIIA
Sbjct: 301 GVGGWADHGVDSGKYSRELMSHSVTAIRDEPKRSVDPARVLEKAHSSTKAKGSSTACIIA 360

Query: 351 LTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIF 410
           LTD+GL AINLGDSGF+VVRDGCTVFRSPVQQHDFNFTYQLE G+N DLPSSGQV  F  
Sbjct: 361 LTDEGLHAINLGDSGFIVVRDGCTVFRSPVQQHDFNFTYQLESGNNGDLPSSGQV--FTI 418

Query: 411 PCA 413
           P A
Sbjct: 419 PVA 421

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225458346|ref|XP_002281672.1| PREDICTED: probable protein phosphatase 2C 55-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224136550|ref|XP_002326888.1| predicted protein [Populus trichocarpa] gi|222835203|gb|EEE73638.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356552130|ref|XP_003544423.1| PREDICTED: probable protein phosphatase 2C 55-like [Glycine max] Back     alignment and taxonomy information
>gi|356564255|ref|XP_003550371.1| PREDICTED: probable protein phosphatase 2C 55-like [Glycine max] Back     alignment and taxonomy information
>gi|359476721|ref|XP_002268376.2| PREDICTED: probable protein phosphatase 2C 55-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297800460|ref|XP_002868114.1| hypothetical protein ARALYDRAFT_493218 [Arabidopsis lyrata subsp. lyrata] gi|297313950|gb|EFH44373.1| hypothetical protein ARALYDRAFT_493218 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42566875|ref|NP_193391.3| putative protein phosphatase 2C 55 [Arabidopsis thaliana] gi|226739227|sp|Q9SUK9.2|P2C55_ARATH RecName: Full=Probable protein phosphatase 2C 55; Short=AtPP2C55 gi|332658373|gb|AEE83773.1| putative protein phosphatase 2C 55 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297735191|emb|CBI17553.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255568271|ref|XP_002525110.1| protein phosphatase 2c, putative [Ricinus communis] gi|223535569|gb|EEF37237.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
TAIR|locus:2130834467 AT4G16580 [Arabidopsis thalian 0.761 0.702 0.537 2.2e-82
TAIR|locus:2173679414 AT5G66720 [Arabidopsis thalian 0.619 0.644 0.510 1.6e-61
DICTYBASE|DDB_G0280067516 DDB_G0280067 "protein phosphat 0.373 0.312 0.423 4.9e-28
TAIR|locus:2060822298 PBCP "PHOTOSYSTEM II CORE PHOS 0.375 0.543 0.375 2.9e-24
TAIR|locus:2119246724 AT4G33500 [Arabidopsis thalian 0.352 0.209 0.411 7.5e-22
UNIPROTKB|B4K616312 fig "Protein phosphatase PTC7 0.271 0.375 0.457 2.6e-20
UNIPROTKB|B4M5T5313 fig "Protein phosphatase PTC7 0.271 0.373 0.453 5.6e-20
UNIPROTKB|B3MTI8332 fig "Protein phosphatase PTC7 0.320 0.415 0.393 2.8e-19
UNIPROTKB|B4NBL6315 fig "Protein phosphatase PTC7 0.271 0.371 0.441 4.5e-19
UNIPROTKB|B4JYN1307 fig "Protein phosphatase PTC7 0.287 0.403 0.405 2.1e-18
TAIR|locus:2130834 AT4G16580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 186/346 (53%), Positives = 222/346 (64%)

Query:    62 GTIFAARSDLLLANQKRNLSVVGAIXXXXXXXXXXXXXXXXCGYHIDRALSDPSQSSVSG 121
             G +  A SDLLL N++RNLSV+GA+                CGYHID  LSDP       
Sbjct:    38 GFLEPASSDLLLINERRNLSVIGAVSRTFSVPSVSGPAFQVCGYHIDLLLSDP------- 90

Query:   122 NCQKKLMAASASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSLKSSKQSN 181
              C  K MA+  SK++ VD  ++     SL +       V        R +M L+    + 
Sbjct:    91 -C--KSMASLGSKSLFVDRHSA-----SLVSKRFTGGMVSGDGPNRGRISMRLRGKDHNE 142

Query:   182 NHLFHGYFICNFAKRWFNFFPQIDA-GLRCFHSLSPASFSAGTVPDVSFDSASREEQLGT 240
                   YF    AKRW     Q    G R  HS      SAG  PDVS D++  +EQ+  
Sbjct:   143 KSTICAYFAYRGAKRWIYLNQQRRGMGFRGLHSSLSNRLSAGNAPDVSLDNSVTDEQVRD 202

Query:   241 SAASSEQKISAGKTLKLLSGACCLPHPDKEETGGEDAHFI-SDKQAIGVADGVGGWANHG 299
             S+ S   K+   K LKL+SG+C LPHPDKE TGGEDAHFI +++QA+GVADGVGGWA  G
Sbjct:   203 SSDSVAAKLCT-KPLKLVSGSCYLPHPDKEATGGEDAHFICAEEQALGVADGVGGWAELG 261

Query:   300 VNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAKGSSTACIIALTDQGLRAI 359
             ++AG YSRELMSNSV AIQ+EP GSIDPARVLEKAH+ T+++GSSTACIIALT+QGL AI
Sbjct:   262 IDAGYYSRELMSNSVNAIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAI 321

Query:   360 NLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQV 405
             NLGDSGF+VVR+G TVFRSPVQQHDFNFTYQLE G N DLPSSGQV
Sbjct:   322 NLGDSGFMVVREGHTVFRSPVQQHDFNFTYQLESGRNGDLPSSGQV 367
GO:0003824 "catalytic activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
TAIR|locus:2173679 AT5G66720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280067 DDB_G0280067 "protein phosphatase 2C-related protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2060822 PBCP "PHOTOSYSTEM II CORE PHOSPHATASE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119246 AT4G33500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|B4K616 fig "Protein phosphatase PTC7 homolog fig" [Drosophila mojavensis (taxid:7230)] Back     alignment and assigned GO terms
UNIPROTKB|B4M5T5 fig "Protein phosphatase PTC7 homolog fig" [Drosophila virilis (taxid:7244)] Back     alignment and assigned GO terms
UNIPROTKB|B3MTI8 fig "Protein phosphatase PTC7 homolog fig" [Drosophila ananassae (taxid:7217)] Back     alignment and assigned GO terms
UNIPROTKB|B4NBL6 fig "Protein phosphatase PTC7 homolog fig" [Drosophila willistoni (taxid:7260)] Back     alignment and assigned GO terms
UNIPROTKB|B4JYN1 fig "Protein phosphatase PTC7 homolog fig" [Drosophila grimshawi (taxid:7222)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SUK9P2C55_ARATH3, ., 1, ., 3, ., 1, 60.52690.85610.7901yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.40.393.1
hypothetical protein (444 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-06
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-06
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-04
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 6e-04
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 19/113 (16%)

Query: 274 GEDAHFISDKQA-----IGVADGVGGWANHGVNAGLYSRELMSNSVA-AIQEEPDGSIDP 327
            EDAH I+   +      GV DG GG       A  +  + +   +A  + +E D   D 
Sbjct: 23  MEDAHVITPDLSDSGGFFGVFDGHGGSE-----AAKFLSKNLPEILAEELIKEKDELEDV 77

Query: 328 ARVLEKAHSST--------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDG 372
              L KA  ST         A   STA +  ++   L   N+GDS  V+ R+G
Sbjct: 78  EEALRKAFLSTDEEILEELEALSGSTAVVALISGNKLYVANVGDSRAVLCRNG 130

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 431
KOG1379330 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.97
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.94
PLN03145365 Protein phosphatase 2c; Provisional 99.93
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.91
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.89
PTZ00224 381 protein phosphatase 2C; Provisional 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.8
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.78
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.6
KOG0698330 consensus Serine/threonine protein phosphatase [Si 99.59
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 99.39
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.19
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.07
KOG1323 493 consensus Serine/threonine phosphatase [Signal tra 99.06
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.05
KOG0699 542 consensus Serine/threonine protein phosphatase [Si 98.2
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 96.66
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-37  Score=308.67  Aligned_cols=238  Identities=39%  Similarity=0.572  Sum_probs=182.5

Q ss_pred             Eeeecccccccccccccccccccc--cccccccccCCCCCCCCCCCchhhhhcccCccccccccC-CCcceEEEeeeeec
Q 014059          188 YFICNFAKRWFNFFPQIDAGLRCF--HSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKIS-AGKTLKLLSGACCL  264 (431)
Q Consensus       188 y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~l~l~~gs~~l  264 (431)
                      |+.+.+...|..+....+.|+...  |++.....++.+++-.+++.-.........++..-..+. .-..+....+.+..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~vt~~~~~~~~~~~   81 (330)
T KOG1379|consen    2 YFMFRLLAIGMLLTKRAGQVLNRLVRHSSNVLRLSSQNAGFVSFSKYAKSTYGSDNSPGEAASLSSLVTSLCGFSKDFIR   81 (330)
T ss_pred             cceehhHHHHHHHHHhhhhhHhhhhhccccchhhhccccCccccccccccccccCCCCcccccchhhhhhhccccccccC
Confidence            334444444444444444444433  334444455555555555543222222222222222111 11456667778888


Q ss_pred             CCCCCCCCCCCccEEe-c--CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhcccCC
Q 014059          265 PHPDKEETGGEDAHFI-S--DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAK  341 (431)
Q Consensus       265 Th~GkvR~~NEDA~~v-~--~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~~~~~~  341 (431)
                      +|+-++-+.+|||||+ .  ...+++||||||||+..|||+|.|+++||.+|.+.++.......+|..+|.+||.+.+..
T Consensus        82 ~~~~~~~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~  161 (330)
T KOG1379|consen   82 PHPSKVGKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ  161 (330)
T ss_pred             CccccCCCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc
Confidence            9999999999999999 4  678999999999999999999999999999999888877666779999999999875544


Q ss_pred             -----CCceEEEEEEe--CCceEEEEecCccEEEEECCeEEEeCccccccccChhhhhcCC------CCCCCCcccccce
Q 014059          342 -----GSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGS------NSDLPSSGQVGSF  408 (431)
Q Consensus       342 -----GGTTavva~L~--~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~fn~P~QLt~a~------ggd~p~~~dvd~~  408 (431)
                           |+||+|++.++  +++||+||+|||++.++|+|++++.|++|+|+||+||||+..+      ..|.|..++.  +
T Consensus       162 ~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~~p~~~~~~~~d~p~~ad~--~  239 (330)
T KOG1379|consen  162 KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSSPPEGYSSYISDVPDSADV--T  239 (330)
T ss_pred             CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeeccCCccccccccCCccccce--E
Confidence                 99999999998  6789999999999999999999999999999999999998765      3688888888  9


Q ss_pred             EEeeccCCCCcEEEEeCCCCCC
Q 014059          409 IFPCAHHFSQNLYIFLRVGLFA  430 (431)
Q Consensus       409 ~i~L~pG~~DDi~LLCSDGLtd  430 (431)
                      .++|++|   |++||.||||||
T Consensus       240 ~~~v~~G---DvIilATDGlfD  258 (330)
T KOG1379|consen  240 SFDVQKG---DVIILATDGLFD  258 (330)
T ss_pred             EEeccCC---CEEEEecccccc
Confidence            9999999   999999999998

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 1e-06
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Length = 193 Back     alignment and structure
 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 17/126 (13%)

Query: 260 GACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAA 316
           G         E   G DA  +        + V DG+G    HG  A   +       +A+
Sbjct: 7   GIYTRAREG-EIACG-DACLVKRVEGVIFLAVGDGIG----HGPEAARAAEIA----IAS 56

Query: 317 IQEEPDGSIDPARVLEKAHSSTRAKGSSTACI--IALTDQGLRAINLGDSGFVVVRDGCT 374
           ++   +       + +  H   R    + A +  +       +A  +G+    ++     
Sbjct: 57  MESSMN--TGLVNIFQLCHRELRGTRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGI 114

Query: 375 VFRSPV 380
           +     
Sbjct: 115 ITPLAT 120

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.95
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.95
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.94
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.94
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 99.93
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 99.93
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.93
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.93
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.93
3rnr_A211 Stage II sporulation E family protein; structural 99.93
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 99.92
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.91
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.91
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 99.9
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.89
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 99.89
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.87
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.87
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.74
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.68
3f79_A255 Probable two-component response regulator; adaptor 99.51
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.47
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.71
3eq2_A394 Probable two-component response regulator; adaptor 98.15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
Probab=99.95  E-value=1.2e-27  Score=221.20  Aligned_cols=158  Identities=17%  Similarity=0.197  Sum_probs=116.5

Q ss_pred             eeecCCCCCCCCCCCccEEecCCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhc---
Q 014059          261 ACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSS---  337 (431)
Q Consensus       261 s~~lTh~GkvR~~NEDA~~v~~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~~---  337 (431)
                      ..+.+++|++|+.|||++++ +..+|+||||||||.     +|++|++++.+........ ....++.+.|++++..   
T Consensus         7 ~~~~s~~G~~r~~nED~~~~-~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~-~~~~~~~~~l~~a~~~~~~   79 (237)
T 1txo_A            7 YAARSDRGLVRANNEDSVYA-GARLLALADGMGGHA-----AGEVASQLVIAALAHLDDD-EPGGDLLAKLDAAVRAGNS   79 (237)
T ss_dssp             EEEEEECCSSCSSCCEEEEE-CSSEEEEEEEECTTT-----HHHHHHHHHHHHHGGGGSS-CCCSCHHHHHHHHHHHHHH
T ss_pred             EEEecCCCCCCCcCCCcccc-CCCEEEEEeCCCCcH-----HHHHHHHHHHHHHHHHhhh-CCchhHHHHHHHHHHHHHH
Confidence            44558999999999999988 567999999999997     5888888877554322221 1123455555554332   


Q ss_pred             ---------cc-CCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccc-------ccccC-------hhh--h
Q 014059          338 ---------TR-AKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQ-------HDFNF-------TYQ--L  391 (431)
Q Consensus       338 ---------~~-~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQe-------h~fn~-------P~Q--L  391 (431)
                               .. ..+|||++++++.+++++++||||||+|++|+|++.++|+||.       .+...       |.+  +
T Consensus        80 ~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~~~~G~i~~~~~~~~~~~~~~  159 (237)
T 1txo_A           80 AIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLI  159 (237)
T ss_dssp             HHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTSSCTTGGGGCTTTTCB
T ss_pred             HHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHHHHHcCCCCHHHHhhCccccce
Confidence                     12 2359999999999999999999999999999999999999874       22233       332  2


Q ss_pred             hcCCCCCCCCcccccceEEeeccCCCCcEEEEeCCCCCCC
Q 014059          392 EYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV  431 (431)
Q Consensus       392 t~a~ggd~p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtdv  431 (431)
                      ++.. ++....+++  .++++.+|   |.||||||||||+
T Consensus       160 tr~l-g~~~~~p~~--~~~~l~~~---d~lvl~SDGl~d~  193 (237)
T 1txo_A          160 MRAL-TGHEVEPTL--TMREARAG---DRYLLCSDGLSDP  193 (237)
T ss_dssp             CCCB-SSSCCCCEE--EEEECCTT---CEEEEECHHHHTT
T ss_pred             eecc-CCCCccceE--EEEecCCC---CEEEEECCCCCCC
Confidence            3333 344445666  89999999   9999999999985
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 431
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 8e-06
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.5 bits (104), Expect = 8e-06
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 275 EDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPA------ 328
           ED+ +    + + +ADG+GG A     AG  + +L+  ++A + ++  G    A      
Sbjct: 19  EDSVYA-GARLLALADGMGGHA-----AGEVASQLVIAALAHLDDDEPGGDLLAKLDAAV 72

Query: 329 -----RVLEKAHSSTRAKGSSTACIIALTDQGLRAI-NLGDSGFVVVRDG----CTVFRS 378
                 +  +       +G  T     L       + ++GDS   ++RDG     T   +
Sbjct: 73  RAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDT 132

Query: 379 PVQQHDFNFTYQLEYGSN 396
            VQ          E   +
Sbjct: 133 FVQTLVDEGRITPEEAHS 150

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.96
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 99.89
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5e-30  Score=236.03  Aligned_cols=160  Identities=17%  Similarity=0.199  Sum_probs=120.2

Q ss_pred             eeeeecCCCCCCCCCCCccEEecCCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHh--
Q 014059          259 SGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHS--  336 (431)
Q Consensus       259 ~gs~~lTh~GkvR~~NEDA~~v~~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~--  336 (431)
                      ...++.||+|++|+.|||++++ +..+|+|||||||+.     +|++|++++......+... ....++.+.|++++.  
T Consensus         3 ~~~~~~s~~G~~R~~nEDa~~~-~~~l~~V~DG~GG~~-----~g~~as~~~~~~l~~~~~~-~~~~~~~~~l~~~~~~~   75 (235)
T d1txoa_           3 LRYAARSDRGLVRANNEDSVYA-GARLLALADGMGGHA-----AGEVASQLVIAALAHLDDD-EPGGDLLAKLDAAVRAG   75 (235)
T ss_dssp             EEEEEEEECCSSCSSCCEEEEE-CSSEEEEEEEECTTT-----HHHHHHHHHHHHHGGGGSS-CCCSCHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCCcccc-CCCEEEEEeCCCCcH-----HHHHHHHHHHHHHHHHhhc-cCcccHHHHHHHHHHHH
Confidence            4456779999999999999998 567999999999987     5888888887655433222 123445444444322  


Q ss_pred             ----------cccC-CCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccc--------------ccccChhh-
Q 014059          337 ----------STRA-KGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQ--------------HDFNFTYQ-  390 (431)
Q Consensus       337 ----------~~~~-~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQe--------------h~fn~P~Q-  390 (431)
                                +... .+|||++++++.++.++++||||||+|++|+|++.++|+||.              ...++|++ 
T Consensus        76 ~~~l~~~~~~~~~~~~~gtt~~~~~~~~~~l~~anvGDSr~~l~r~g~~~~lt~dH~~~~~~~~~g~~~~~~~~~~~~~~  155 (235)
T d1txoa_          76 NSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRS  155 (235)
T ss_dssp             HHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTSSCTTGGGGCTTTT
T ss_pred             HHHHHHHhhcccccccceeeeeeeeeccceeEEEecCCccEEEecCCEEEEecCCCcHHHHhhhhcccchhhhhhccccc
Confidence                      1223 358999999999999999999999999999999999999864              12344444 


Q ss_pred             -hhcCCCCCCCCcccccceEEeeccCCCCcEEEEeCCCCCCC
Q 014059          391 -LEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV  431 (431)
Q Consensus       391 -Lt~a~ggd~p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtdv  431 (431)
                       +++. .++....+++  ..+++++|   |+||||||||||+
T Consensus       156 ~lt~~-~g~~~~~pdi--~~~~l~~~---D~llL~SDGl~d~  191 (235)
T d1txoa_         156 LIMRA-LTGHEVEPTL--TMREARAG---DRYLLCSDGLSDP  191 (235)
T ss_dssp             CBCCC-BSSSCCCCEE--EEEECCTT---CEEEEECHHHHTT
T ss_pred             hhhcc-cccccccceE--EEEecCCC---CEEEEcCcchhcC
Confidence             2333 2444555777  99999999   9999999999985
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure