Citrus Sinensis ID: 014084
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| 224140449 | 426 | predicted protein [Populus trichocarpa] | 0.988 | 1.0 | 0.772 | 0.0 | |
| 255582658 | 416 | conserved hypothetical protein [Ricinus | 0.965 | 1.0 | 0.786 | 0.0 | |
| 296083173 | 479 | unnamed protein product [Vitis vinifera] | 0.997 | 0.897 | 0.730 | 0.0 | |
| 359481133 | 421 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 1.0 | 0.731 | 0.0 | |
| 356503254 | 427 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 0.992 | 0.751 | 0.0 | |
| 147810260 | 446 | hypothetical protein VITISV_027513 [Viti | 0.976 | 0.943 | 0.690 | 0.0 | |
| 449461771 | 440 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.975 | 0.691 | 0.0 | |
| 357468875 | 421 | hypothetical protein MTR_4g016940 [Medic | 0.974 | 0.997 | 0.715 | 0.0 | |
| 356521034 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.986 | 0.720 | 0.0 | |
| 388515393 | 421 | unknown [Lotus japonicus] | 0.974 | 0.997 | 0.732 | 1e-177 |
| >gi|224140449|ref|XP_002323595.1| predicted protein [Populus trichocarpa] gi|222868225|gb|EEF05356.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/431 (77%), Positives = 384/431 (89%), Gaps = 5/431 (1%)
Query: 1 MSLAQSPAATMKSYRGKLPLSIITVLVCSFAIIALLYTERLSSLSSGSIFKLSSCPKRNH 60
MSLA S +A MK +GKLP+S++T+++CSFA IALLYT+ +S S+FKL SCP+RN
Sbjct: 1 MSLAPSQSAAMKPSKGKLPISVVTIIICSFAFIALLYTD-----TSRSLFKLKSCPRRNP 55
Query: 61 IKKSKDKTAEQNIYNTEIDDRFDFDPEECNVVNGKWVFNSSIKPLYSDRTCPYLDMQVSC 120
+KKSKD+TAE + N ++DDRF+FDPEEC V GKW+FN ++KPLY+DR+CPYLD QVSC
Sbjct: 56 VKKSKDRTAEDKLKNFQMDDRFEFDPEECTVNTGKWMFNKTLKPLYTDRSCPYLDRQVSC 115
Query: 121 VKNGRPDSDYRHWEWQPEDCTLPRFNPELALKKLRNKKLLFVGDSLQRGQWQSFVCMVES 180
VKNGR DSDYR WEWQP+DCTLPRFNPELALKKLR K+LLFVGDSLQRGQWQSFVC+VE
Sbjct: 116 VKNGRRDSDYRRWEWQPDDCTLPRFNPELALKKLRGKRLLFVGDSLQRGQWQSFVCLVEW 175
Query: 181 IIPEDKKHFKRGRSHTVFKAKEYNASIEFYWAPFLIESNSDLQIIGDPKKRILKVDSIEK 240
IIPEDKK K SH+VF+AKEY+A+IEFYWAPFLIESN+D II DPKKRILKVDSI+K
Sbjct: 176 IIPEDKKSMKEVGSHSVFRAKEYDATIEFYWAPFLIESNTDHHIIADPKKRILKVDSIDK 235
Query: 241 HAKHWGAVDIIVFNTYVWWMSGIRLKTLWGSFANGADGFEELDTPIAYRIGLKTWANWID 300
HAKHWG VD +VFNTYVWWMSGIRLKTLWGSFANG +G+EELDTP+AY+IGLKTWANWID
Sbjct: 236 HAKHWGGVDFLVFNTYVWWMSGIRLKTLWGSFANGEEGYEELDTPVAYKIGLKTWANWID 295
Query: 301 STINPNRTRVFFTTMSPTHTKSIDWGNKDGIKCFNETKPVTKKKHWGSGSDKKMMSVVSD 360
S INPN+TRVFFTTMSPTHT+S DW N +G+KCFNETKPV KKK+WGSGSDK+MMSVV+
Sbjct: 296 SNINPNKTRVFFTTMSPTHTRSEDWNNTEGLKCFNETKPVLKKKYWGSGSDKRMMSVVAS 355
Query: 361 VVKKMKVPVTFLNITQISEYRIDAHASVYTEAGGKVLTEEERADPLRHADCIHWCLPGVP 420
+ KKMKVPVTF+NITQ+SEYRIDAHASVYTE GGK+LTEE+RADPL HADCIHWCLPGVP
Sbjct: 356 IGKKMKVPVTFINITQLSEYRIDAHASVYTETGGKLLTEEQRADPLHHADCIHWCLPGVP 415
Query: 421 DTWNQIFLAHL 431
DTWN+IFLA+L
Sbjct: 416 DTWNRIFLAYL 426
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582658|ref|XP_002532108.1| conserved hypothetical protein [Ricinus communis] gi|223528211|gb|EEF30270.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|296083173|emb|CBI22809.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359481133|ref|XP_002263633.2| PREDICTED: uncharacterized protein LOC100255845 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356503254|ref|XP_003520426.1| PREDICTED: uncharacterized protein LOC100790014 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147810260|emb|CAN73526.1| hypothetical protein VITISV_027513 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449461771|ref|XP_004148615.1| PREDICTED: uncharacterized protein LOC101212899 [Cucumis sativus] gi|449531593|ref|XP_004172770.1| PREDICTED: uncharacterized protein LOC101226938 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357468875|ref|XP_003604722.1| hypothetical protein MTR_4g016940 [Medicago truncatula] gi|355505777|gb|AES86919.1| hypothetical protein MTR_4g016940 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356521034|ref|XP_003529163.1| PREDICTED: uncharacterized protein LOC100785873 [Glycine max] | Back alignment and taxonomy information |
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| >gi|388515393|gb|AFK45758.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| TAIR|locus:2179172 | 434 | TBL3 "TRICHOME BIREFRINGENCE-L | 0.962 | 0.956 | 0.598 | 6.9e-150 | |
| TAIR|locus:2082078 | 487 | ESK1 "ESKIMO 1" [Arabidopsis t | 0.863 | 0.763 | 0.454 | 2.2e-96 | |
| TAIR|locus:2063125 | 425 | TBL33 "AT2G40320" [Arabidopsis | 0.844 | 0.856 | 0.441 | 1.3e-91 | |
| TAIR|locus:2065069 | 424 | TBL28 "TRICHOME BIREFRINGENCE- | 0.798 | 0.811 | 0.459 | 5.7e-91 | |
| TAIR|locus:2057145 | 410 | TBL34 "AT2G38320" [Arabidopsis | 0.846 | 0.890 | 0.403 | 3.8e-78 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.772 | 0.598 | 0.355 | 1.2e-58 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.684 | 0.776 | 0.316 | 1.8e-58 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.758 | 0.688 | 0.347 | 2.5e-58 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.825 | 0.585 | 0.337 | 5.1e-58 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.772 | 0.828 | 0.340 | 2.2e-57 |
| TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 252/421 (59%), Positives = 312/421 (74%)
Query: 17 KLPLSIITVLVCSFAIIALLYTERXXXXXXXXXXXXX-----XCPKRNHIKKSKDKTAEQ 71
K+PLSII +++C F LLYTER CP+++ K K+K ++
Sbjct: 14 KIPLSIIVLVLCGFMFFILLYTERISLLSSSSSSSSSFFKLKSCPRKDVSSKPKEKIRKE 73
Query: 72 NIYNTEI-DDRFDFDPEECNVVNGKWVFNSSIKPLYSDRTCPYLDMQVSCVKNGRPDSDY 130
E+ DDRF+FDPEECNV GKWV+NSSI+PLY+DR+CPY+D Q SC+KNG+P++DY
Sbjct: 74 RSEILEVLDDRFEFDPEECNVAAGKWVYNSSIEPLYTDRSCPYIDRQFSCMKNGQPETDY 133
Query: 131 RHWEWQPEDCTLPRFNPEXXXXXXXXXXXXFVGDSLQRGQWQSFVCMVESIIPEDKKHFK 190
WEWQP+DCT+PRF+P+ FVGDSLQR QW+SFVC+VESIIPE +K K
Sbjct: 134 LRWEWQPDDCTIPRFSPKLAMNKLRGKRLLFVGDSLQRSQWESFVCLVESIIPEGEKSMK 193
Query: 191 RGRSHTVFKAKEYNASIEFYWAPFLIESNSDLQIIGDPKKRILKVDSIEKHAKHWGAVDI 250
R + + VFKAKEYNA+IEFYWAP+++ESN+D+ +I DPKKRI+KVDS++ AK W DI
Sbjct: 194 RSQKYFVFKAKEYNATIEFYWAPYIVESNTDIPVISDPKKRIVKVDSVKDRAKFWEGADI 253
Query: 251 IVFNTYVWWMSGIRLKTLWGSFANGADGFEELDTPIAYRIGLKTWANWIDSTINPNRTRV 310
+VFNTYVWWMSG+R+K LWGSF NG G E LDT +AYR+GLKTWANW+DST++PN+TRV
Sbjct: 254 LVFNTYVWWMSGLRMKALWGSFGNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRV 313
Query: 311 FFTTMSPTHTKSIDWGNKDGIKCFNETKPVTKKKHWGSGXXXXXXXXXXXXXXXXXXPVT 370
FFTTMSPTHT+S DWG +G KCFNETKP+ KK WG+G VT
Sbjct: 314 FFTTMSPTHTRSADWGKPNGTKCFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVT 373
Query: 371 FLNITQISEYRIDAHASVYTEAGGKVLTEEERADPLRHADCIHWCLPGVPDTWNQIFLAH 430
+NITQ+SEYRIDAH SVYTE GGK+LT E+RADP+ HADCIHWCLPG+PDTWN+I LAH
Sbjct: 374 VINITQLSEYRIDAHTSVYTETGGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAH 433
Query: 431 L 431
L
Sbjct: 434 L 434
|
|
| TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-105 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 7e-94 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-21 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-105
Identities = 120/293 (40%), Positives = 174/293 (59%), Gaps = 26/293 (8%)
Query: 142 LPRFNPELALKKLRNKKLLFVGDSLQRGQWQSFVCMVESIIPEDKKHFKRGRSHTVFKAK 201
LPRF+ + L++LR K+++FVGDSL R QW+S VC++ + P K +R F+ K
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 202 EYNASIEFYWAPFLIESNSDLQIIGDPKKRILKVDSI-EKHAKHWGAVDIIVFNTYVWWM 260
+YN +IEFYW+PFL+ES++ + KR+LK+DSI EK +K W D++VFN+ WW+
Sbjct: 61 DYNVTIEFYWSPFLVESDNA-----EEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWWL 115
Query: 261 SGIRLKTLWGSFANGADGFEELDTPIAYRIGLKTWANWIDSTINPNRTRVFFTTMSPTHT 320
K G ++E+ AYR L+TWA W+D + P++TRVFF T SP H
Sbjct: 116 HR---KVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSPVHF 172
Query: 321 KSIDWGNKDGIKCFNETKPVTKKKHWGSGSDKKMMSVVSDVVKK--MKVPVTFLNITQIS 378
+ +W G C ET+P+ G +M+ +V++V+ + MK PV L+IT +S
Sbjct: 173 EGGEWNT--GGSC-YETEPLLGS--EYKGLTPEMIDIVNEVLSRAAMKTPVKLLDITLLS 227
Query: 379 EYRIDAHASVYTEAGGKVLTEEERADPLRHADCIHWCLPGVPDTWNQIFLAHL 431
+YR D H SVY + G P + DC+HWCLPGVPDTWN++ LA L
Sbjct: 228 QYRKDGHPSVYRKPGP----------PKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.88 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 94.91 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 80.23 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-119 Score=913.75 Aligned_cols=336 Identities=40% Similarity=0.836 Sum_probs=305.3
Q ss_pred CCCCCCCCcCccCeeeeCCCCCCCCCCCCCC-CcccccccccCCCCCCccccceeeCCCCCCCCCCHHHHHHHHcCCcEE
Q 014084 82 FDFDPEECNVVNGKWVFNSSIKPLYSDRTCP-YLDMQVSCVKNGRPDSDYRHWEWQPEDCTLPRFNPELALKKLRNKKLL 160 (431)
Q Consensus 82 ~~~~~~~Cd~~~G~WV~d~~~~PlY~~~~Cp-fi~~~~~C~~nGRpD~~Yl~WRWqP~gC~Lprfd~~~fL~~lRgKrl~ 160 (431)
...+++.||+|+|+||+|++ +|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++|||||||
T Consensus 46 ~~~~~~~CD~f~G~WV~D~s-~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~ 124 (387)
T PLN02629 46 LQANQSTCALFVGTWVRDDS-YPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM 124 (387)
T ss_pred CCCCccccCCCCCeEecCCC-CCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence 34567899999999999986 5999999999 999999999999999999999999999999999999999999999999
Q ss_pred EEecchhhhHHHHHHHhhhccCCCCccceeecCceeEEEEeecCceEEEEEccceeccCCCccccCCCccceeecchhhh
Q 014084 161 FVGDSLQRGQWQSFVCMVESIIPEDKKHFKRGRSHTVFKAKEYNASIEFYWAPFLIESNSDLQIIGDPKKRILKVDSIEK 240 (431)
Q Consensus 161 FVGDSl~Rnq~~SLlCLL~~~~p~~~~~~~~~~~~~~~~f~~yn~TV~f~WsPfLv~~~~~~~~~~~~~~~~l~lD~id~ 240 (431)
||||||+|||||||+|||++++|...+.+.++++..+|+|++||+||+||||||||+.+.+. ..++|++|+++.
T Consensus 125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~ 198 (387)
T PLN02629 125 FVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISG 198 (387)
T ss_pred EeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcch
Confidence 99999999999999999999998776666667788899999999999999999999987543 245799999999
Q ss_pred hhcccCcccEEEEeccccccccccccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCC
Q 014084 241 HAKHWGAVDIIVFNTYVWWMSGIRLKTLWGSFANGADGFEELDTPIAYRIGLKTWANWIDSTINPNRTRVFFTTMSPTHT 320 (431)
Q Consensus 241 ~~~~w~~~DvlV~ntG~Ww~r~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~VffRt~SP~Hf 320 (431)
+++.|+++|||||||||||.+++. ...++++++|+.++++|++.+||++||+||++||++++++.+|+|||||+||+||
T Consensus 199 ~a~~w~~~DvlVfntghWw~~~~~-~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hf 277 (387)
T PLN02629 199 NANAWRDADVLIFNTGHWWSHQGS-LQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHY 277 (387)
T ss_pred hhhhhccCCEEEEeCccccCCCCe-eEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccc
Confidence 999999999999999999999874 4567889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---CCCCCCCCCccCCCCccCCCCCchhHHHHHHHHHHhcCCceEEeecccccccccccCCccccccCCccc
Q 014084 321 KSIDWGNK---DGIKCFNETKPVTKKKHWGSGSDKKMMSVVSDVVKKMKVPVTFLNITQISEYRIDAHASVYTEAGGKVL 397 (431)
Q Consensus 321 ~~g~W~~~---~gg~C~~~T~P~~~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDIT~ls~~R~DgHps~y~~~~~~~~ 397 (431)
+||+||++ ++|+|+++|+|+.++++.+ ....+++++++++++++.+|+|||||+||++|||||||+|+.. +
T Consensus 278 e~g~Wn~gg~~~~~~C~~et~P~~~~~~~~--~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~----~ 351 (387)
T PLN02629 278 NPSEWSAGASTTTKNCYGETTPMSGMTYPG--AYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD----L 351 (387)
T ss_pred cCCCcCCCCCCCCCCCccCCccCcCccccC--cchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC----C
Confidence 99999973 2468999999998776653 3445677999999999999999999999999999999999742 2
Q ss_pred chhhcCCCCCCCCcccccCCCcchHHHHHHHHhC
Q 014084 398 TEEERADPLRHADCIHWCLPGVPDTWNQIFLAHL 431 (431)
Q Consensus 398 ~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L 431 (431)
+++++++|..++||+||||||||||||||||++|
T Consensus 352 ~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 352 SPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred chhhccCCCCCCCcccccCCCCCccHHHHHHHHH
Confidence 5677788888999999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 79/495 (15%), Positives = 133/495 (26%), Gaps = 172/495 (34%)
Query: 48 SIFKLSSCPKRNHIKKSKDKTAEQNIY---------NTEIDDRFDFDPEECNVVNGKWVF 98
SI +HI SKD A E+ +F EE +N K++
Sbjct: 44 SILSKEEI---DHIIMSKD--AVSGTLRLFWTLLSKQEEMVQKF---VEEVLRINYKFLM 95
Query: 99 NSSIKPLYSDRTCPYLDMQVSCV----KNGRPDSDYRHWEWQPEDCTLPRFNPEL----A 150
S IK + M + + + + Y + R P L A
Sbjct: 96 -SPIKTEQRQPSMMT-RMYIEQRDRLYNDNQVFAKY----------NVSRLQPYLKLRQA 143
Query: 151 LKKLRNKKLLFV------GDSLQRGQWQSFVCMVESIIPEDKKHFKRGRSHTVF-----K 199
L +LR K + + G + + + K + +F
Sbjct: 144 LLELRPAKNVLIDGVLGSGKT----------WVALDVCLSYK--VQCKMDFKIFWLNLKN 191
Query: 200 AKEYNASIEFYWAPFLIESNSDLQIIGDPKKRI-LKVDSIE-------KHAKHWGAVDII 251
+E L + + + D I L++ SI+ K + + ++
Sbjct: 192 CNSPETVLEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 252 --VFNTYVWWMSGIRLKTLWGS-------FANGA-----------DGFEELDT------- 284
V N W + K L + F + A +
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 285 ----------------PIA-------YRIGLKTWANW-----------IDSTIN---PNR 307
P R GL TW NW I+S++N P
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 308 TRVFFTTMSPTHTKSIDWGNKDGIKCFNETKPVTKK---KHWGSGSDKKMMSVVSDVVKK 364
R F + S+ F + + W +M VV+ + K
Sbjct: 371 YRKMFDRL------SV----------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 365 MKVPVTFLNITQISEYRIDAHASVYTEAGGKVLTEEERADPLRHADCI-------HWCLP 417
L Q E I S+Y E L + + H + +
Sbjct: 415 ------SLVEKQPKESTISIP-SIYLE-----LKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 418 G-VPDTWNQIFLAHL 431
+P +Q F +H+
Sbjct: 463 DLIPPYLDQYFYSHI 477
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 94.86 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.13 Score=45.69 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=37.1
Q ss_pred CcccEEEEeccccccccccccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEecCCCCC
Q 014084 246 GAVDIIVFNTYVWWMSGIRLKTLWGSFANGADGFEELDTPIAYRIGLKTWANWIDSTINPNRTRVFFTTMSPTHT 320 (431)
Q Consensus 246 ~~~DvlV~ntG~Ww~r~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~k~~VffRt~SP~Hf 320 (431)
..+|+||++.|..= . ....+.|+..|+++++.+.+.. .+++|+|.+..|...
T Consensus 73 ~~pd~Vvi~~G~ND-----~----------------~~~~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHG-----F----------------DYTEEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSC-----T----------------TSCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCC-----C----------------CCCHHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCcc
Confidence 46899999988631 0 0125789999999998886542 456788998888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.44 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.37 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 81.44 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.44 E-value=0.012 Score=49.74 Aligned_cols=14 Identities=29% Similarity=0.482 Sum_probs=12.3
Q ss_pred cCCcEEEEecchhh
Q 014084 155 RNKKLLFVGDSLQR 168 (431)
Q Consensus 155 RgKrl~FVGDSl~R 168 (431)
..|||+|+|||++-
T Consensus 3 ~~kri~~iGDSit~ 16 (207)
T d3dc7a1 3 SFKRPAWLGDSITA 16 (207)
T ss_dssp CCSSEEEEESTTTS
T ss_pred CCCEEEEEehHhhc
Confidence 46899999999984
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|