Citrus Sinensis ID: 014151
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 430 | 2.2.26 [Sep-21-2011] | |||||||
| Q7Y223 | 433 | Mannan endo-1,4-beta-mann | yes | no | 0.993 | 0.986 | 0.749 | 0.0 | |
| Q9M0H6 | 431 | Mannan endo-1,4-beta-mann | no | no | 0.997 | 0.995 | 0.720 | 0.0 | |
| Q0JJD4 | 445 | Mannan endo-1,4-beta-mann | no | no | 0.993 | 0.959 | 0.573 | 1e-147 | |
| Q0DCM5 | 440 | Mannan endo-1,4-beta-mann | no | no | 0.872 | 0.852 | 0.516 | 1e-113 | |
| Q9LZV3 | 448 | Mannan endo-1,4-beta-mann | no | no | 0.886 | 0.850 | 0.476 | 1e-106 | |
| Q0JKM9 | 432 | Mannan endo-1,4-beta-mann | no | no | 0.867 | 0.863 | 0.5 | 1e-102 | |
| Q9FJZ3 | 431 | Mannan endo-1,4-beta-mann | no | no | 0.886 | 0.883 | 0.443 | 1e-98 | |
| Q9SG94 | 414 | Mannan endo-1,4-beta-mann | no | no | 0.869 | 0.903 | 0.437 | 7e-98 | |
| Q9SG95 | 408 | Putative mannan endo-1,4- | no | no | 0.913 | 0.963 | 0.44 | 1e-96 | |
| Q2RBB1 | 379 | Mannan endo-1,4-beta-mann | no | no | 0.839 | 0.952 | 0.476 | 9e-96 |
| >sp|Q7Y223|MAN2_ARATH Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/427 (74%), Positives = 368/427 (86%)
Query: 4 AGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNS 63
GNG PI+GF +CVAFIY+SFG L E E+ FV RNGT F++DGKALYVNGWNS
Sbjct: 5 TGNGPVIPILGFLTCVAFIYLSFGDLWFGLKTEGELAFVKRNGTQFVVDGKALYVNGWNS 64
Query: 64 YWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALD 123
YW MDHAV+D+SR RV AML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVFKALD
Sbjct: 65 YWFMDHAVNDHSRHRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALD 124
Query: 124 HVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKH 183
HVI EA+ +GVRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+SSSNDSFFFDPSI +YFK+
Sbjct: 125 HVIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKN 184
Query: 184 YVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKK 243
Y+ +LTRKN++TG+EYRNDPTIFAWELINEPRCMSD SGDTLQDWI+EM+AF+KSID K
Sbjct: 185 YLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNK 244
Query: 244 HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLE 303
HL+TVGLEGFYGP SPK+LTVNPE WAS LGSDF+RNS++ NIDFASVHIYPDHWFHD
Sbjct: 245 HLLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQG 304
Query: 304 FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKS 363
FE+ LKFV KWMLSHIEDGDKEL KPV FTE+GLSNL K ++PS RD+ Y+TI D++YKS
Sbjct: 305 FEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKS 364
Query: 364 AKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLEKGN 423
AKRKRSGAG L+WQ +EGME +NDDFGIVPWE+ S +L+ EQSC L RI+ +L
Sbjct: 365 AKRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRITGRHLLDKK 424
Query: 424 LKELCSH 430
E+CSH
Sbjct: 425 SIEMCSH 431
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 7EC: 8 |
| >sp|Q9M0H6|MAN5_ARATH Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/430 (72%), Positives = 361/430 (83%), Gaps = 1/430 (0%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
MV N I+GF C AFIY+SF L +++ + ++GFV RNGT F++D K LYVNG
Sbjct: 1 MVPTRNRPMLRILGFFICAAFIYLSFRDLWLNHKGKAKLGFVKRNGTQFVVDDKPLYVNG 60
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYW MDHAV ++SR VG ML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVF+
Sbjct: 61 WNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFQ 120
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALDHVI EARK+ VRLLLSLVNNLQAYGGKTQYV WAW+EG+G+SSSNDSFFFDPSI Y
Sbjct: 121 ALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRNY 180
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+Y+K +LTRKN++TG+EYRNDPTIFAWELINEPRC +D SG TLQDWIDEM+ F+KSI
Sbjct: 181 FKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSI 240
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D KHL+TVGLEGFYGP SPK LTVNPE WAS LG+DF++NSN+ NIDFASVHIYPDHWFH
Sbjct: 241 DDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQNSNSSNIDFASVHIYPDHWFH 300
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
+ FE+ LKFV KWM SHIEDG KEL KPV FTE+GLSN K +EPS RDK Y+ I D+V
Sbjct: 301 NQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLSNQNKDYEPSQRDKFYRIIFDVV 360
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAKRK+SGAG L+WQLF+EGME +NDDFGIVP E+ S YKL+ EQSC LG+++ L+
Sbjct: 361 YKSAKRKKSGAGTLVWQLFMEGMETFNDDFGIVPHEQDSIYKLMIEQSCRLGKVTG-RLK 419
Query: 421 KGNLKELCSH 430
+ LKELCSH
Sbjct: 420 EQKLKELCSH 429
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q0JJD4|MAN2_ORYSJ Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica GN=MAN2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/446 (57%), Positives = 324/446 (72%), Gaps = 19/446 (4%)
Query: 2 VAAGNGL-FFPIIGFASCVAFIYMSFGGLNV--SYPKEP-----------EMGFVTRNGT 47
+A GNGL + I+G ASC+A +Y S G +++ + P P + FV R G
Sbjct: 1 MAVGNGLILYHILGLASCIALVYFSLGEVDLRDALPSLPFSGGASRAAAASLPFVERRGK 60
Query: 48 HFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL 107
LDG+ Y+NGWNSYWLMD AV +R RV +M + MGLTVCRTWAFNDG YN+L
Sbjct: 61 RLFLDGRPFYINGWNSYWLMDLAVEPNTRPRVSSMFRTAVSMGLTVCRTWAFNDGSYNAL 120
Query: 108 QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSS 167
Q+SPG FDERVFKALD V+ EA ++GVRL+LSL NNL AYGGK QYV WAWEEG+G+++S
Sbjct: 121 QLSPGHFDERVFKALDRVVAEASEHGVRLILSLANNLDAYGGKRQYVRWAWEEGVGLTAS 180
Query: 168 NDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227
NDSFFFDP+I YFK Y+KT+L RKN +TG+EYR+DPTI AWEL+NEPRC SDPSGDTLQ
Sbjct: 181 NDSFFFDPAIRDYFKVYLKTLLMRKNHLTGLEYRDDPTILAWELMNEPRCTSDPSGDTLQ 240
Query: 228 DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK-RLTVNPEMW-ASALGSDFIRNSNNDN 285
W++EMSA+VKSIDKKHL+TVG EGFYGP S + +L +NP W + G+DFIRNS +
Sbjct: 241 RWMEEMSAYVKSIDKKHLLTVGTEGFYGPTSSQEKLNINPGEWFPNNYGADFIRNSKIQD 300
Query: 286 IDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFE 345
IDFASVH+YPD+W ++ LKF+T+W+ +H+EDGD EL KPV TE+GLS+ ++GFE
Sbjct: 301 IDFASVHVYPDNWLQHASLDEKLKFMTRWITAHVEDGDGELEKPVLVTEFGLSHQVEGFE 360
Query: 346 PSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLT 405
+ RD LY+ + DIV+ SA+R + GAL+WQL EGMEEY+D F IVP ER S +L+
Sbjct: 361 DAHRDVLYRAVYDIVHGSARRGGAAGGALVWQLAAEGMEEYHDGFSIVPSERPSMMRLIK 420
Query: 406 EQSCGLGRISRLNLEKGN--LKELCS 429
EQSC L + R E LK +C+
Sbjct: 421 EQSCRLAAV-RYGEEGARKVLKTVCA 445
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q0DCM5|MAN6_ORYSJ Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica GN=MAN6 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/383 (51%), Positives = 262/383 (68%), Gaps = 8/383 (2%)
Query: 36 EPEMGFVTRNGTHFML--DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTV 93
+P M F R GTHF+ G LYVNGWNSYWL+ S A ML+ G +MGL+V
Sbjct: 48 QPRMPFAARRGTHFVDADTGSPLYVNGWNSYWLLPAR----SPALAAEMLRRGRRMGLSV 103
Query: 94 CRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153
CRTWAF+DGG +LQISPG+F E VF+ LD+VI EAR+N +RL+L LVNNL GGK QY
Sbjct: 104 CRTWAFSDGGPGALQISPGRFSEAVFQVLDYVIYEARRNHIRLILCLVNNLDNLGGKAQY 163
Query: 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN 213
V WA G +++S DSF+ P+I +Y+K YVK +LTR+N+ + + Y ++P IFAWEL+N
Sbjct: 164 VQWAQAAGANMTNSTDSFYSHPTIKRYYKDYVKAILTRRNSYSRIRYSDEPAIFAWELMN 223
Query: 214 EPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASAL 273
EPRC+S+ SG LQ WI EM+A+VKS+D HLVTVG EGFYGP +RL VNP WA++L
Sbjct: 224 EPRCVSNSSGPYLQAWIAEMAAYVKSLDTNHLVTVGTEGFYGPGIAERLGVNPGEWAASL 283
Query: 274 GSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFT 333
SDFI+NS ++IDFASVH YPD W E+ +++++ W+ SH+ D ++ L KPV FT
Sbjct: 284 CSDFIQNSAVEHIDFASVHAYPDSWLPRASLEEKVRYLSNWVDSHLNDSEQILKKPVLFT 343
Query: 334 EYGLSNLIKGFEPSL--RDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG 391
E G S RD + + + D +Y SA++ ++G+GALIWQL VEG Y D+F
Sbjct: 344 EVGYLQHSDANSNSTVDRDIILRIVYDKIYDSARKLQAGSGALIWQLMVEGTHMYGDNFS 403
Query: 392 IVPWERTSTYKLLTEQSCGLGRI 414
+V +R STY L+T QSC L R+
Sbjct: 404 VVARDRPSTYSLITNQSCRLQRL 426
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9LZV3|MAN6_ARATH Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/382 (47%), Positives = 251/382 (65%), Gaps = 1/382 (0%)
Query: 36 EPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR 95
E + V R G F L+G+ YVNG+N+YW+M A + +R +V + Q + +G+TV R
Sbjct: 42 EEQWEMVQRKGMQFTLNGQPFYVNGFNTYWMMTLAADNSTRGKVTEVFQQASAVGMTVGR 101
Query: 96 TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155
TWAFNDG + +LQ SP +DE VFKALD V+ EARK +RL+LSLVNN AYGGK QYV
Sbjct: 102 TWAFNDGQWRALQKSPSVYDEEVFKALDFVLSEARKYKIRLILSLVNNWDAYGGKAQYVK 161
Query: 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEP 215
W G+ ++S +D FF +P++ +++ +V+TVL R NT T + Y+NDPTIFAWEL+NEP
Sbjct: 162 WGNASGLNLTSDDD-FFTNPTLRNFYQSHVRTVLNRVNTFTNITYKNDPTIFAWELMNEP 220
Query: 216 RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275
RC SDPSGD LQ WI EM+ FVKS+D KHLV +GLEGFYGP +P R NP +A+ +G+
Sbjct: 221 RCPSDPSGDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGT 280
Query: 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEY 335
DFIRN+ IDFASVH+YPD W L+F + WM +H+ED + L PV FTE+
Sbjct: 281 DFIRNNQVLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDAEMYLGMPVLFTEF 340
Query: 336 GLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPW 395
G+S GF S RD + T+ + S ++ +GAG+L+WQ+F +G E +D + +
Sbjct: 341 GVSAHDPGFNTSFRDMMLNTVYKMTLNSTRKGGAGAGSLVWQVFPQGAEFMDDGYAVYLT 400
Query: 396 ERTSTYKLLTEQSCGLGRISRL 417
+ K+++ QS L + L
Sbjct: 401 RAHTASKIISLQSKRLAIFNSL 422
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q0JKM9|MAN1_ORYSJ Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/378 (50%), Positives = 248/378 (65%), Gaps = 5/378 (1%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
FV GT F+LDG Y NG+N+YWLM A R +V A L A GLTV RTWAF+
Sbjct: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
Query: 101 DGGY-NSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
DGG N+LQ+SPG ++E FK LD V+ EARK G++++LSLV+N ++GG+ QYVNWA
Sbjct: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
+G GI S +D FF +P + ++K++VKTVLTRKNTITGV YR+DPTI AWEL+NEPRC S
Sbjct: 157 QGQGIGS-DDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQS 215
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRL-TVNPEMWASALGSDFI 278
D SG T+Q WI EM+A VKSID+ H++ VGLEGFYG SP R+ VNP + LG+DFI
Sbjct: 216 DLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGY--QLGTDFI 273
Query: 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338
N+ IDFA+VH YPD W + + L F+ +W+ +HI D L KP+ E+G S
Sbjct: 274 ANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADAQAVLRKPLLIAEFGKS 333
Query: 339 NLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERT 398
G+ RD LY T+ +Y+SA+R + G L WQL V GM+ Y D + +V E
Sbjct: 334 WKDPGYSSGQRDALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETP 393
Query: 399 STYKLLTEQSCGLGRISR 416
ST ++T S L +S+
Sbjct: 394 STTGVITTNSRRLRFLSK 411
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9FJZ3|MAN7_ARATH Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 250/390 (64%), Gaps = 9/390 (2%)
Query: 37 PEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRT 96
P GFV G F L+G Y NG+N+YWLM A R+++ Q ++ GLTV RT
Sbjct: 27 PSGGFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVART 86
Query: 97 WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156
WAF+DGGY +LQ SPG ++E +F+ LD + EAR++G++++LS NN +++GG+ QYV+W
Sbjct: 87 WAFSDGGYRALQYSPGSYNEDMFQGLDFALAEARRHGIKIILSFANNYESFGGRKQYVDW 146
Query: 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216
A G +SS +D FF D + ++K+++K VL R NT T V Y++DPTI AWEL+NEPR
Sbjct: 147 ARSRGRPVSSEDD-FFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPR 205
Query: 217 CMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSD 276
C SDPSG +Q WI EM+A VKS+D+ HL+ GLEGFYG SP+ T+NP G+D
Sbjct: 206 CPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNP---PGQFGTD 262
Query: 277 FIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYG 336
FI N+ IDF +VH YPD WF D + + F+ KW+ +HI+D L+KP+ E+G
Sbjct: 263 FIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFG 322
Query: 337 LSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396
S G+ P+ RD ++ T+ +Y SAKR + AG L WQL V G++ + D +GI+ +
Sbjct: 323 KSMKKPGYTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQLLVNGIDNFQDGYGIILSQ 382
Query: 397 RTSTYKLLTEQSCGLGRISR-----LNLEK 421
+ST ++++QS L I + +N+EK
Sbjct: 383 SSSTVNVISQQSRKLTLIRKIFARMINVEK 412
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9SG94|MAN3_ARATH Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (917), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 164/375 (43%), Positives = 243/375 (64%), Gaps = 1/375 (0%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
GFV+R G F+L+GK Y NG+N+YWL A +R ++ + Q LT+ RTW F
Sbjct: 30 GFVSRKGVQFILNGKPFYANGFNAYWLAYEATDSTTRFKITYVFQNATIHDLTIVRTWGF 89
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
DGGY +LQI+PG +DE+ F+ LD I EA++ G++++++ VNN +GG+ QYV+WA
Sbjct: 90 RDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRKQYVDWAKN 149
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
G +SS +D F+ +P + +Y+K++VKT++ R NT T VEY+++PTI WEL+NEP+C +
Sbjct: 150 TGQNVSSDDD-FYTNPLVKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRA 208
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279
DPSG TL W++EM+ +VKS+D KHL++ GLEGFYG SP+R T + A+ LG+DFI
Sbjct: 209 DPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANVLGTDFIA 268
Query: 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
N D IDFAS+H YPD WF +L+ + L + KW+ H+ED L KP+ E+G
Sbjct: 269 NHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFGKPT 328
Query: 340 LIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTS 399
G+ + RD ++ D +Y+SA++ AGAL W + +GM + D IV E ++
Sbjct: 329 NTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGALFWHVISDGMNNFKDPLSIVLSENST 388
Query: 400 TYKLLTEQSCGLGRI 414
T ++TE+S LG I
Sbjct: 389 TVNIITEESRKLGLI 403
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q9SG95|MAN4_ARATH Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 253/400 (63%), Gaps = 7/400 (1%)
Query: 18 CVAFIYMSFGGLNVSY---PKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDY 74
C+ FI + + SY P GFV+RNG F+L+GK Y NG+N+YWL A
Sbjct: 3 CLCFIVLLAIVIAQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPT 62
Query: 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGG-YNSLQISPGQFDERVFKALDHVIVEARKNG 133
+R ++ + Q +GLT+ RTW F DG Y +LQ +PG +DE+ F+ LD VI EA++ G
Sbjct: 63 TRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIG 122
Query: 134 VRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193
++L++ LVNN YGGK QYV+WA +G + SSND F+ +P I ++K++VKTVL R N
Sbjct: 123 IKLIILLVNNWDDYGGKKQYVDWARSKG-EVVSSNDDFYRNPVIKDFYKNHVKTVLNRVN 181
Query: 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF 253
T T V Y+++P I AW+L+NEPRC D SG TL DWI+EM+ FVKS+D HL++ G EGF
Sbjct: 182 TFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGF 241
Query: 254 YGPKSPKRL-TVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVT 312
YG SP+R ++NP + A+ +G+DFI N N D IDFAS+H D WF L+ L F+
Sbjct: 242 YGDSSPERKNSLNP-VSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIK 300
Query: 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372
+W+ HIED L KPV E+GL + + + RD ++ T DI+Y SA++ S AG
Sbjct: 301 RWLEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAG 360
Query: 373 ALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLG 412
AL W++ EGM + I+ +++ST +++E + +G
Sbjct: 361 ALFWEVISEGMSNFAGPSSIILSDKSSTVNIISEHARKMG 400
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
| >sp|Q2RBB1|MAN7_ORYSJ Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 350 bits (899), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 174/365 (47%), Positives = 232/365 (63%), Gaps = 4/365 (1%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
V R GT G+ ++G+N+YWLM A +R RV A + A+ GL VC TWAF+
Sbjct: 11 MVERRGTQLWASGRPFIIHGFNTYWLMSFAADQATRLRVTAAI---AEAGLNVCCTWAFS 67
Query: 101 DGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160
DGGY +LQ +P +DE VF+ALD V+ EAR++ +RL+LSL NN + YGGK QYV W E
Sbjct: 68 DGGYRALQTAPFHYDEDVFRALDFVVSEARRHNMRLILSLCNNWEDYGGKAQYVRWGKEA 127
Query: 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD 220
G+ ++S +D FF DP+I Y+K +V+ V+TR NT+T Y++DPTI AWELINEPRC SD
Sbjct: 128 GLDLTSEDD-FFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSD 186
Query: 221 PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN 280
PSGDTLQ W++EM+++VKSID HL+ +G+EGFYGP P+ L VNP+ ++ G DFIRN
Sbjct: 187 PSGDTLQAWMEEMASYVKSIDPVHLLEIGIEGFYGPSIPELLPVNPDEYSGHAGIDFIRN 246
Query: 281 SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL 340
ID AS+H+Y D W E+ L+FV KWM HI+D L P+ E+G+S
Sbjct: 247 HQAPGIDLASIHVYSDIWLPQSIKENHLQFVDKWMQQHIDDAANLLGMPIVVGEFGVSVK 306
Query: 341 IKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTST 400
F R+ KTI I S K G G L+WQLF EG E +D + ++ + ST
Sbjct: 307 DGKFGNEFREDFMKTIYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYAVIFAKSPST 366
Query: 401 YKLLT 405
LL
Sbjct: 367 LSLLA 371
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 430 | ||||||
| 118488294 | 435 | unknown [Populus trichocarpa] | 0.993 | 0.981 | 0.773 | 0.0 | |
| 224121924 | 435 | predicted protein [Populus trichocarpa] | 0.993 | 0.981 | 0.773 | 0.0 | |
| 297832668 | 432 | glycosyl hydrolase family 5 protein [Ara | 1.0 | 0.995 | 0.748 | 0.0 | |
| 225007946 | 443 | endo-beta-mannanase [Malus x domestica] | 1.0 | 0.970 | 0.753 | 0.0 | |
| 30681096 | 433 | mannan endo-1,4-beta-mannosidase 2 [Arab | 0.993 | 0.986 | 0.749 | 0.0 | |
| 225446370 | 437 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.997 | 0.981 | 0.732 | 0.0 | |
| 302143296 | 432 | unnamed protein product [Vitis vinifera] | 0.997 | 0.993 | 0.732 | 0.0 | |
| 449444366 | 431 | PREDICTED: mannan endo-1,4-beta-mannosid | 0.993 | 0.990 | 0.731 | 0.0 | |
| 255553737 | 431 | hydrolase, hydrolyzing O-glycosyl compou | 0.993 | 0.990 | 0.742 | 0.0 | |
| 297799142 | 431 | glycosyl hydrolase family 5 protein [Ara | 0.997 | 0.995 | 0.725 | 0.0 |
| >gi|118488294|gb|ABK95966.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/428 (77%), Positives = 382/428 (89%), Gaps = 1/428 (0%)
Query: 2 VAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKE-PEMGFVTRNGTHFMLDGKALYVNG 60
+ AGNGL +PI+GFASCVAFIYMSFGG ++ +E E+ FV RNGT FM+DG+A Y+NG
Sbjct: 4 MVAGNGLLYPILGFASCVAFIYMSFGGFILTNHQEHRELSFVERNGTQFMVDGRAFYING 63
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYWLMDH+V + + RVGAML+AGAKMGLTVCRTWAFNDGGYN+LQ+SPG+FDERV +
Sbjct: 64 WNSYWLMDHSVDEDRKPRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQVSPGRFDERVLR 123
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALD+VI EAR++GVRLLLSLVNNL+AYGGKTQYVNWAWEEGIG+SSSNDSFFFDPSI +Y
Sbjct: 124 ALDYVIAEARQHGVRLLLSLVNNLKAYGGKTQYVNWAWEEGIGLSSSNDSFFFDPSIKRY 183
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FKHYVKT+LTRKNTITG+EYRNDPTIFAWEL+NEPRCMSDPSGDTLQDWI+EMSAFVK+I
Sbjct: 184 FKHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQDWIEEMSAFVKTI 243
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
DK HL+TVGLEGFYGPK+PKRLTVNPE WAS+LGSDF+RNS IDFASVHIYPDHWF
Sbjct: 244 DKNHLLTVGLEGFYGPKNPKRLTVNPESWASSLGSDFVRNSKAPAIDFASVHIYPDHWFP 303
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
EFED LK+V+KWMLSHIEDG EL+KPVFFTE+GLSNL K F+PS RD+ YKTI DI+
Sbjct: 304 HQEFEDKLKYVSKWMLSHIEDGHYELSKPVFFTEFGLSNLNKDFQPSQRDRFYKTIFDII 363
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKS+KRKR+GAGALIWQLFVEGM+++NDDFGIVPWER ST ++LT+QSC L RI ++ +
Sbjct: 364 YKSSKRKRAGAGALIWQLFVEGMDDFNDDFGIVPWERESTNRILTDQSCRLARIHGISPQ 423
Query: 421 KGNLKELC 428
LKELC
Sbjct: 424 NKYLKELC 431
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121924|ref|XP_002330687.1| predicted protein [Populus trichocarpa] gi|222872291|gb|EEF09422.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/428 (77%), Positives = 381/428 (89%), Gaps = 1/428 (0%)
Query: 2 VAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKE-PEMGFVTRNGTHFMLDGKALYVNG 60
+ AGNGL +PI+GFASCVAFIYMSFGG ++ +E E+ FV RNGT FM+DG+A Y+NG
Sbjct: 4 MVAGNGLLYPILGFASCVAFIYMSFGGFILTNHQEHRELSFVERNGTQFMVDGRAFYING 63
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYWLMDH+V + + RVGAML+AGAKMGLTVCRTWAFNDGGYN+LQ+SPG+FDERV +
Sbjct: 64 WNSYWLMDHSVDEDRKPRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQVSPGRFDERVLR 123
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALD+VI EAR++GVRLLLSLVNNL+AYGGKTQYVNWAWEEGIG+SSSNDSFFFDPSI +Y
Sbjct: 124 ALDYVIAEARQHGVRLLLSLVNNLKAYGGKTQYVNWAWEEGIGLSSSNDSFFFDPSIKRY 183
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FKHYVKT+LTRKNTITG+EYRNDPTIFAWEL+NEPRCMSDPSGDTLQDWI+EMSAFVK+I
Sbjct: 184 FKHYVKTLLTRKNTITGIEYRNDPTIFAWELMNEPRCMSDPSGDTLQDWIEEMSAFVKTI 243
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D HL+TVGLEGFYGPK+PKRLTVNPE WAS+LGSDF+RNS IDFASVHIYPDHWF
Sbjct: 244 DTNHLLTVGLEGFYGPKNPKRLTVNPESWASSLGSDFVRNSKAPAIDFASVHIYPDHWFP 303
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
EFED LK+V+KWMLSHIEDG ELNKPVFFTE+GLSNL K F+PS RD+ YKTI DI+
Sbjct: 304 HQEFEDKLKYVSKWMLSHIEDGHYELNKPVFFTEFGLSNLNKDFQPSQRDRFYKTIFDII 363
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKS+KRKR+GAGALIWQLFVEGM+++NDDFGIVPWER ST ++LT+QSC L RI ++ +
Sbjct: 364 YKSSKRKRAGAGALIWQLFVEGMDDFNDDFGIVPWERESTNRILTDQSCRLARIHGISPQ 423
Query: 421 KGNLKELC 428
LKELC
Sbjct: 424 NKYLKELC 431
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297832668|ref|XP_002884216.1| glycosyl hydrolase family 5 protein [Arabidopsis lyrata subsp. lyrata] gi|297330056|gb|EFH60475.1| glycosyl hydrolase family 5 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/430 (74%), Positives = 373/430 (86%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
M GNG PI+GF +CVAFIY+SFG L + +E E+GFV RNGT F++DGKALYVNG
Sbjct: 1 MAPTGNGPVIPILGFLTCVAFIYLSFGDLLFDFKREGELGFVKRNGTQFVVDGKALYVNG 60
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYW MDHAV+D+SR RVGAML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVFK
Sbjct: 61 WNSYWFMDHAVNDHSRHRVGAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFK 120
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALDHVI EA+ +GVRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+SSSNDSFFFDPSI +Y
Sbjct: 121 ALDHVIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRY 180
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+Y+ +LTRKN++TG+EYRNDPTIFAWELINEPRCMSD SGDTLQDWI+EM+AF+KSI
Sbjct: 181 FKNYLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSI 240
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D KHL+TVGLEGFYGP +PKRLTVNPE WAS LGSDF+RNS++ NIDFASVHIYPDHWFH
Sbjct: 241 DNKHLLTVGLEGFYGPNNPKRLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFH 300
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
D FE+ LKFV KWMLSHIEDGDKEL KPV FTE+GLSNL K ++PS RD+ Y+TI D++
Sbjct: 301 DQGFEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVI 360
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAKRKRSGAG L+WQ +EGME +NDDFGIVPWE+ S +L+ EQSC L R++ +L
Sbjct: 361 YKSAKRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRVTGRHLL 420
Query: 421 KGNLKELCSH 430
E+CSH
Sbjct: 421 DKKSIEMCSH 430
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225007946|gb|ACN78665.1| endo-beta-mannanase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/430 (75%), Positives = 371/430 (86%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
MV AGNGLF+PIIGFASCVAFIYMSFG L ++ + ++ FV RNGT FMLDGKA Y+NG
Sbjct: 12 MVVAGNGLFYPIIGFASCVAFIYMSFGNLGSNFGNQTKLSFVGRNGTQFMLDGKAFYING 71
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYWLMD++V ++ + RV +LQAGAKMGLTVCRTWAFNDG YN+LQISPG F+E+VFK
Sbjct: 72 WNSYWLMDNSVDEHRKPRVRQILQAGAKMGLTVCRTWAFNDGDYNALQISPGHFNEQVFK 131
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALDHVIVEAR+ G+RLLL LVNNLQAYGGKTQYV WAWEEG+G+S+SNDSFFFDPSI Y
Sbjct: 132 ALDHVIVEARQQGIRLLLCLVNNLQAYGGKTQYVKWAWEEGVGLSASNDSFFFDPSIRIY 191
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+YVKT+LTRKNT+ G++YRNDPTIFAWELINEPRC++D SGDTLQDWI+EMSAFVK+I
Sbjct: 192 FKNYVKTLLTRKNTLNGIQYRNDPTIFAWELINEPRCITDASGDTLQDWIEEMSAFVKAI 251
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
DK HL+TVGLEGFYGPKSPKRLTVNPEMWAS LGSDFIRNS NIDFASVHIYPDHWFH
Sbjct: 252 DKNHLLTVGLEGFYGPKSPKRLTVNPEMWASRLGSDFIRNSKIPNIDFASVHIYPDHWFH 311
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
D EF ++LKFV KWM SHIEDGD ELNKPV FTEYGLSN K FEPS R + YKTILD++
Sbjct: 312 DEEFHNNLKFVYKWMRSHIEDGDNELNKPVMFTEYGLSNQNKDFEPSQRVRFYKTILDVI 371
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAK+ +SGAGAL WQ FV GM+EYND+FGI+PWE S YK++ EQSC L R+ +
Sbjct: 372 YKSAKKNQSGAGALAWQFFVGGMDEYNDEFGIIPWESPSEYKMMIEQSCRLARLKGPTQQ 431
Query: 421 KGNLKELCSH 430
+ NLK+LCS
Sbjct: 432 QRNLKDLCSQ 441
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30681096|ref|NP_179660.2| mannan endo-1,4-beta-mannosidase 2 [Arabidopsis thaliana] gi|75233455|sp|Q7Y223.1|MAN2_ARATH RecName: Full=Mannan endo-1,4-beta-mannosidase 2; AltName: Full=Beta-mannanase 2; AltName: Full=Endo-beta-1,4-mannanase 2; Short=AtMAN2; Flags: Precursor gi|30793940|gb|AAP40422.1| putative glycosyl hydrolase family 5 protein/cellulase ((1-4)-beta-mannan endohydrolase) [Arabidopsis thaliana] gi|109134159|gb|ABG25077.1| At2g20680 [Arabidopsis thaliana] gi|110737068|dbj|BAF00487.1| hypothetical protein [Arabidopsis thaliana] gi|330251962|gb|AEC07056.1| mannan endo-1,4-beta-mannosidase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/427 (74%), Positives = 368/427 (86%)
Query: 4 AGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNS 63
GNG PI+GF +CVAFIY+SFG L E E+ FV RNGT F++DGKALYVNGWNS
Sbjct: 5 TGNGPVIPILGFLTCVAFIYLSFGDLWFGLKTEGELAFVKRNGTQFVVDGKALYVNGWNS 64
Query: 64 YWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALD 123
YW MDHAV+D+SR RV AML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVFKALD
Sbjct: 65 YWFMDHAVNDHSRHRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALD 124
Query: 124 HVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKH 183
HVI EA+ +GVRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+SSSNDSFFFDPSI +YFK+
Sbjct: 125 HVIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKN 184
Query: 184 YVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKK 243
Y+ +LTRKN++TG+EYRNDPTIFAWELINEPRCMSD SGDTLQDWI+EM+AF+KSID K
Sbjct: 185 YLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNK 244
Query: 244 HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLE 303
HL+TVGLEGFYGP SPK+LTVNPE WAS LGSDF+RNS++ NIDFASVHIYPDHWFHD
Sbjct: 245 HLLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQG 304
Query: 304 FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKS 363
FE+ LKFV KWMLSHIEDGDKEL KPV FTE+GLSNL K ++PS RD+ Y+TI D++YKS
Sbjct: 305 FEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKS 364
Query: 364 AKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLEKGN 423
AKRKRSGAG L+WQ +EGME +NDDFGIVPWE+ S +L+ EQSC L RI+ +L
Sbjct: 365 AKRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRITGRHLLDKK 424
Query: 424 LKELCSH 430
E+CSH
Sbjct: 425 SIEMCSH 431
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446370|ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/430 (73%), Positives = 365/430 (84%), Gaps = 1/430 (0%)
Query: 2 VAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGW 61
+ AGNGLF+PIIGFAS AFIYMSFG L ++ +E +M FV RNGT FM+DGK Y+NGW
Sbjct: 6 MMAGNGLFYPIIGFASVFAFIYMSFGDLKINLSEETKMSFVGRNGTQFMVDGKVFYINGW 65
Query: 62 NSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121
NSYWLMD AV +YS+ RV AMLQAGAKMGLTVCRTWAFNDG Y++LQISPG+FDERVFKA
Sbjct: 66 NSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFNDGAYHALQISPGRFDERVFKA 125
Query: 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYF 181
LDHVI EARK G+RLLL+LVNNLQAYGGKTQYVNWAW+EGIG+SSSNDSFFFDPSI YF
Sbjct: 126 LDHVIAEARKQGIRLLLTLVNNLQAYGGKTQYVNWAWQEGIGLSSSNDSFFFDPSIRIYF 185
Query: 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID 241
K+YVK VLTRKN+ITG+EYRNDPTIF WELINEPRCMSD SGDTLQDW++EMSA+VKSID
Sbjct: 186 KNYVKAVLTRKNSITGIEYRNDPTIFGWELINEPRCMSDASGDTLQDWLEEMSAYVKSID 245
Query: 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD 301
KKHL+T+GLEGFYGP SPKRLTVNP WA+ LG+DFIRNS IDFAS HIYPDHWFH
Sbjct: 246 KKHLLTIGLEGFYGPNSPKRLTVNPAEWAATLGADFIRNSKISTIDFASAHIYPDHWFHG 305
Query: 302 LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVY 361
EFE +LK+V+KWMLSHIEDG+KEL KPV FTE+G S K F PS RD+ +KT+ D++Y
Sbjct: 306 QEFEAELKYVSKWMLSHIEDGEKELKKPVMFTEFGFSTDNKNFHPSKRDRFFKTVFDVMY 365
Query: 362 KSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRIS-RLNLE 420
+SA++ +GAG+ +WQ V GMEEYNDDFGIVPWER +TY+L+TE +C L RI L +
Sbjct: 366 QSARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARIQGGLAQQ 425
Query: 421 KGNLKELCSH 430
K +LK+LCS
Sbjct: 426 KASLKDLCSR 435
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143296|emb|CBI21857.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/430 (73%), Positives = 365/430 (84%), Gaps = 1/430 (0%)
Query: 2 VAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGW 61
+ AGNGLF+PIIGFAS AFIYMSFG L ++ +E +M FV RNGT FM+DGK Y+NGW
Sbjct: 1 MMAGNGLFYPIIGFASVFAFIYMSFGDLKINLSEETKMSFVGRNGTQFMVDGKVFYINGW 60
Query: 62 NSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121
NSYWLMD AV +YS+ RV AMLQAGAKMGLTVCRTWAFNDG Y++LQISPG+FDERVFKA
Sbjct: 61 NSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFNDGAYHALQISPGRFDERVFKA 120
Query: 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYF 181
LDHVI EARK G+RLLL+LVNNLQAYGGKTQYVNWAW+EGIG+SSSNDSFFFDPSI YF
Sbjct: 121 LDHVIAEARKQGIRLLLTLVNNLQAYGGKTQYVNWAWQEGIGLSSSNDSFFFDPSIRIYF 180
Query: 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID 241
K+YVK VLTRKN+ITG+EYRNDPTIF WELINEPRCMSD SGDTLQDW++EMSA+VKSID
Sbjct: 181 KNYVKAVLTRKNSITGIEYRNDPTIFGWELINEPRCMSDASGDTLQDWLEEMSAYVKSID 240
Query: 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD 301
KKHL+T+GLEGFYGP SPKRLTVNP WA+ LG+DFIRNS IDFAS HIYPDHWFH
Sbjct: 241 KKHLLTIGLEGFYGPNSPKRLTVNPAEWAATLGADFIRNSKISTIDFASAHIYPDHWFHG 300
Query: 302 LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVY 361
EFE +LK+V+KWMLSHIEDG+KEL KPV FTE+G S K F PS RD+ +KT+ D++Y
Sbjct: 301 QEFEAELKYVSKWMLSHIEDGEKELKKPVMFTEFGFSTDNKNFHPSKRDRFFKTVFDVMY 360
Query: 362 KSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRIS-RLNLE 420
+SA++ +GAG+ +WQ V GMEEYNDDFGIVPWER +TY+L+TE +C L RI L +
Sbjct: 361 QSARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARIQGGLAQQ 420
Query: 421 KGNLKELCSH 430
K +LK+LCS
Sbjct: 421 KASLKDLCSR 430
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444366|ref|XP_004139946.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Cucumis sativus] gi|449475777|ref|XP_004154548.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/428 (73%), Positives = 368/428 (85%), Gaps = 1/428 (0%)
Query: 4 AGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKE-PEMGFVTRNGTHFMLDGKALYVNGWN 62
AGNGLF+PI+GFASC+AFIY+SFG L + K P + FV RNGT FML+GKA Y+NGWN
Sbjct: 2 AGNGLFYPILGFASCLAFIYLSFGDLRIGDTKVIPIVDFVERNGTQFMLNGKAFYINGWN 61
Query: 63 SYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKAL 122
SYW MDH+V +Y + R+ AMLQA KMGLTVCRTWAFNDGGYN+LQ+SPG+F+ERVFKAL
Sbjct: 62 SYWFMDHSVEEYRKPRIRAMLQAARKMGLTVCRTWAFNDGGYNALQVSPGRFNERVFKAL 121
Query: 123 DHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFK 182
DHVI E+R++G+RLLLSLVNNLQAYGGKTQYV WAW++G+G+SSSNDSFF+DPSI YFK
Sbjct: 122 DHVIAESRQHGIRLLLSLVNNLQAYGGKTQYVKWAWQDGVGLSSSNDSFFYDPSIRIYFK 181
Query: 183 HYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDK 242
+Y+KTVLTRKN+ITG+EYRNDPTIF WELINEPRCM+D SGDTLQ+WI+EM+A++KSIDK
Sbjct: 182 NYLKTVLTRKNSITGIEYRNDPTIFGWELINEPRCMTDASGDTLQEWIEEMTAYIKSIDK 241
Query: 243 KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDL 302
KHL+TVGLEGFYGP SPK+ TVNPE WAS LGSDFIRNS ++DFASVHIYPDHWFHD
Sbjct: 242 KHLLTVGLEGFYGPNSPKKSTVNPEEWASRLGSDFIRNSEIQHVDFASVHIYPDHWFHDQ 301
Query: 303 EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYK 362
+FED+LKFV+KWMLSHIEDGDKEL KPV FTE+GLS+L KGF P+ RD YKT+ D++YK
Sbjct: 302 DFEDELKFVSKWMLSHIEDGDKELKKPVMFTEFGLSDLNKGFTPAQRDSFYKTVYDVIYK 361
Query: 363 SAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLEKG 422
SAKR RSGAG+L WQ VEGMEE NDDFGIVPWER+S Y+L+ EQSC L RI +
Sbjct: 362 SAKRNRSGAGSLAWQFLVEGMEESNDDFGIVPWERSSIYQLIIEQSCRLARIGGDTQQLK 421
Query: 423 NLKELCSH 430
LK +C+
Sbjct: 422 ALKYVCAQ 429
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553737|ref|XP_002517909.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi|223542891|gb|EEF44427.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/428 (74%), Positives = 364/428 (85%), Gaps = 1/428 (0%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
MVAA NGLF+PI+GFASCVAF+YMSFG +SY + PE+ FVTRNGT FM++G+ Y+NG
Sbjct: 1 MVAA-NGLFYPILGFASCVAFLYMSFGDFKLSYHQGPELAFVTRNGTQFMVEGRPFYING 59
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNS+WLMDH+ D + RV AMLQAGAKMGLTVCRTWAFNDG YN+LQ+SPG+FDE VF+
Sbjct: 60 WNSFWLMDHSAEDDRKPRVSAMLQAGAKMGLTVCRTWAFNDGDYNALQVSPGKFDEGVFQ 119
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALD+VI EA ++GVRLLLSLVNNL+AYGGKTQYV WAWEEGIG+SSSNDSFFFDP+I +Y
Sbjct: 120 ALDYVIAEAGRHGVRLLLSLVNNLKAYGGKTQYVKWAWEEGIGLSSSNDSFFFDPTIKRY 179
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+YVKT+LTRKNTITG+ Y NDPTIFAWEL+NEPRC++DPSGDTLQ+WI+EMSAFVKSI
Sbjct: 180 FKNYVKTILTRKNTITGIVYMNDPTIFAWELMNEPRCITDPSGDTLQEWIEEMSAFVKSI 239
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D HL+TVGLEGFYGPK+PKRLTVNPE WAS LGSDFIRNS +IDFASVHIYPDHW
Sbjct: 240 DNNHLLTVGLEGFYGPKNPKRLTVNPEEWASNLGSDFIRNSKVPDIDFASVHIYPDHWIQ 299
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
+ E+ L FV KWM SHIEDG ELNKPVFFTEYG SNL K F P RD+ YKT+LD++
Sbjct: 300 NQGLEEKLTFVYKWMQSHIEDGHYELNKPVFFTEYGFSNLNKDFRPDHRDRFYKTVLDVI 359
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAKRKR+GAGAL+WQLFVE MEE+NDDFGIVPWER STY+ LTEQSC L RI
Sbjct: 360 YKSAKRKRAGAGALVWQLFVEEMEEFNDDFGIVPWERPSTYRFLTEQSCKLARIQGDPRP 419
Query: 421 KGNLKELC 428
K+LC
Sbjct: 420 NQYFKDLC 427
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297799142|ref|XP_002867455.1| glycosyl hydrolase family 5 protein [Arabidopsis lyrata subsp. lyrata] gi|297313291|gb|EFH43714.1| glycosyl hydrolase family 5 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/430 (72%), Positives = 365/430 (84%), Gaps = 1/430 (0%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
MV N I+GF C AFIY+SF L +++ + ++GFV RNGT F++D K LYVNG
Sbjct: 1 MVPTRNRPMLRILGFFICAAFIYLSFRDLWLNHKGKAKLGFVKRNGTQFVVDDKPLYVNG 60
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYW MDHAV ++SR VG ML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVF+
Sbjct: 61 WNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFQ 120
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKY 180
ALDHVI EARK+ VRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+SSSNDSFFFDPSI Y
Sbjct: 121 ALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGVSSSNDSFFFDPSIRNY 180
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+Y+K +LTRKN++TG+EYRNDPTIFAWELINEPRC +D SG TLQDWIDEM+ F+KSI
Sbjct: 181 FKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSI 240
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D KHL+TVGLEGFYGP SPKRLTVNPE WAS LG+DF++NSN+ NIDFASVHIYPDHWFH
Sbjct: 241 DDKHLLTVGLEGFYGPNSPKRLTVNPEQWASELGTDFVQNSNSSNIDFASVHIYPDHWFH 300
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
+ FE+ LKFV KWM SHIEDG KEL KPV FTE+GLSNL K +EPS RDK Y+ I D++
Sbjct: 301 NQTFEEKLKFVVKWMQSHIEDGFKELKKPVLFTEFGLSNLNKDYEPSQRDKFYRIIFDVI 360
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAKRK+SGAG L+WQLF+EGME ++DDFGIVP E+ S YKL+ EQSC LG+++ L+
Sbjct: 361 YKSAKRKKSGAGTLVWQLFMEGMETFSDDFGIVPHEQDSIYKLMIEQSCRLGKVTG-RLK 419
Query: 421 KGNLKELCSH 430
+ NLKELCSH
Sbjct: 420 EQNLKELCSH 429
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 430 | ||||||
| TAIR|locus:2051399 | 433 | MAN2 "endo-beta-mannase 2" [Ar | 0.988 | 0.981 | 0.725 | 1.1e-176 | |
| TAIR|locus:2123628 | 431 | MAN5 "endo-beta-mannase 5" [Ar | 0.997 | 0.995 | 0.693 | 6.6e-168 | |
| TAIR|locus:2180987 | 448 | MAN6 "endo-beta-mannase 6" [Ar | 0.865 | 0.830 | 0.469 | 1.8e-94 | |
| TAIR|locus:2154905 | 431 | MAN7 "AT5G66460" [Arabidopsis | 0.876 | 0.874 | 0.430 | 5.1e-90 | |
| TAIR|locus:2103262 | 414 | AT3G10890 [Arabidopsis thalian | 0.867 | 0.900 | 0.428 | 8.6e-88 | |
| TAIR|locus:2103197 | 408 | AT3G10900 [Arabidopsis thalian | 0.913 | 0.963 | 0.425 | 4.3e-86 | |
| TAIR|locus:2204878 | 411 | MAN1 "endo-beta-mannanase 1" [ | 0.846 | 0.885 | 0.431 | 1.1e-80 | |
| ASPGD|ASPL0000036201 | 383 | AN3358 [Emericella nidulans (t | 0.527 | 0.592 | 0.329 | 2.7e-34 | |
| UNIPROTKB|Q5B7X2 | 383 | manA "Mannan endo-1,4-beta-man | 0.527 | 0.592 | 0.329 | 2.7e-34 | |
| ASPGD|ASPL0000003297 | 399 | manC [Emericella nidulans (tax | 0.611 | 0.659 | 0.349 | 2.3e-32 |
| TAIR|locus:2051399 MAN2 "endo-beta-mannase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1716 (609.1 bits), Expect = 1.1e-176, P = 1.1e-176
Identities = 310/427 (72%), Positives = 360/427 (84%)
Query: 5 GNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSY 64
GNG PI+GF +CVAFIY+SFG L E E+ FV RNGT F++DGKALYVNGWNSY
Sbjct: 6 GNGPVIPILGFLTCVAFIYLSFGDLWFGLKTEGELAFVKRNGTQFVVDGKALYVNGWNSY 65
Query: 65 WLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDH 124
W MDHAV+D+SR RV AML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVFKALDH
Sbjct: 66 WFMDHAVNDHSRHRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALDH 125
Query: 125 VIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHY 184
VI EA+ +GVRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+ I +YFK+Y
Sbjct: 126 VIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNY 185
Query: 185 VKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKH 244
+ +LTRKN++TG+EYRNDPTIFAWELINEPRCMSD SGDTLQDWI+EM+AF+KSID KH
Sbjct: 186 LTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNKH 245
Query: 245 LVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEF 304
L+TVGLEGFYGP SPK+LTVNPE WAS LGSDF+RNS++ NIDFASVHIYPDHWFHD F
Sbjct: 246 LLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQGF 305
Query: 305 EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSA 364
E+ LKFV KWMLSHIEDGDKEL KPV FTE+GLSNL K ++PS RD+ Y+TI D++YKSA
Sbjct: 306 EEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSA 365
Query: 365 KRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRIS-RLNLEKGN 423
KRKRSGAG L+WQ +EGME +NDDFGIVPWE+ S +L+ EQSC L RI+ R L+K +
Sbjct: 366 KRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRITGRHLLDKKS 425
Query: 424 LKELCSH 430
+ E+CSH
Sbjct: 426 I-EMCSH 431
|
|
| TAIR|locus:2123628 MAN5 "endo-beta-mannase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1633 (579.9 bits), Expect = 6.6e-168, P = 6.6e-168
Identities = 298/430 (69%), Positives = 349/430 (81%)
Query: 1 MVAAGNGLFFPIIGFASCVAFIYMSFGGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNG 60
MV N I+GF C AFIY+SF L +++ + ++GFV RNGT F++D K LYVNG
Sbjct: 1 MVPTRNRPMLRILGFFICAAFIYLSFRDLWLNHKGKAKLGFVKRNGTQFVVDDKPLYVNG 60
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120
WNSYW MDHAV ++SR VG ML+AGAKMGLTVCRTWAFNDGGYN+LQISPG+FDERVF+
Sbjct: 61 WNSYWFMDHAVDEHSRNLVGEMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFQ 120
Query: 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKY 180
ALDHVI EARK+ VRLLLSLVNNLQAYGGKTQYV WAW+EG+G+ I Y
Sbjct: 121 ALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRNY 180
Query: 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI 240
FK+Y+K +LTRKN++TG+EYRNDPTIFAWELINEPRC +D SG TLQDWIDEM+ F+KSI
Sbjct: 181 FKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSI 240
Query: 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300
D KHL+TVGLEGFYGP SPK LTVNPE WAS LG+DF++NSN+ NIDFASVHIYPDHWFH
Sbjct: 241 DDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQNSNSSNIDFASVHIYPDHWFH 300
Query: 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360
+ FE+ LKFV KWM SHIEDG KEL KPV FTE+GLSN K +EPS RDK Y+ I D+V
Sbjct: 301 NQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLSNQNKDYEPSQRDKFYRIIFDVV 360
Query: 361 YKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRISRLNLE 420
YKSAKRK+SGAG L+WQLF+EGME +NDDFGIVP E+ S YKL+ EQSC LG+++ L+
Sbjct: 361 YKSAKRKKSGAGTLVWQLFMEGMETFNDDFGIVPHEQDSIYKLMIEQSCRLGKVTG-RLK 419
Query: 421 KGNLKELCSH 430
+ LKELCSH
Sbjct: 420 EQKLKELCSH 429
|
|
| TAIR|locus:2180987 MAN6 "endo-beta-mannase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 175/373 (46%), Positives = 239/373 (64%)
Query: 36 EPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR 95
E + V R G F L+G+ YVNG+N+YW+M A + +R +V + Q + +G+TV R
Sbjct: 42 EEQWEMVQRKGMQFTLNGQPFYVNGFNTYWMMTLAADNSTRGKVTEVFQQASAVGMTVGR 101
Query: 96 TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155
TWAFNDG + +LQ SP +DE VFKALD V+ EARK +RL+LSLVNN AYGGK QYV
Sbjct: 102 TWAFNDGQWRALQKSPSVYDEEVFKALDFVLSEARKYKIRLILSLVNNWDAYGGKAQYVK 161
Query: 156 WAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEP 215
W G+ + + +++ +V+TVL R NT T + Y+NDPTIFAWEL+NEP
Sbjct: 162 WGNASGLNLTSDDDFFTNPT-LRNFYQSHVRTVLNRVNTFTNITYKNDPTIFAWELMNEP 220
Query: 216 RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275
RC SDPSGD LQ WI EM+ FVKS+D KHLV +GLEGFYGP +P R NP +A+ +G+
Sbjct: 221 RCPSDPSGDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGT 280
Query: 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEY 335
DFIRN+ IDFASVH+YPD W L+F + WM +H+ED + L PV FTE+
Sbjct: 281 DFIRNNQVLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDAEMYLGMPVLFTEF 340
Query: 336 GLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPW 395
G+S GF S RD + T+ + S ++ +GAG+L+WQ+F +G E +D + +
Sbjct: 341 GVSAHDPGFNTSFRDMMLNTVYKMTLNSTRKGGAGAGSLVWQVFPQGAEFMDDGYAVYLT 400
Query: 396 ERTSTYKLLTEQS 408
+ K+++ QS
Sbjct: 401 RAHTASKIISLQS 413
|
|
| TAIR|locus:2154905 MAN7 "AT5G66460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 164/381 (43%), Positives = 239/381 (62%)
Query: 37 PEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRT 96
P GFV G F L+G Y NG+N+YWLM A R+++ Q ++ GLTV RT
Sbjct: 27 PSGGFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVART 86
Query: 97 WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156
WAF+DGGY +LQ SPG ++E +F+ LD + EAR++G++++LS NN +++GG+ QYV+W
Sbjct: 87 WAFSDGGYRALQYSPGSYNEDMFQGLDFALAEARRHGIKIILSFANNYESFGGRKQYVDW 146
Query: 157 AWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216
A G + + ++K+++K VL R NT T V Y++DPTI AWEL+NEPR
Sbjct: 147 ARSRGRPVSSEDDFFTDSL-VKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPR 205
Query: 217 CMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSD 276
C SDPSG +Q WI EM+A VKS+D+ HL+ GLEGFYG SP+ T+NP G+D
Sbjct: 206 CPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNPP---GQFGTD 262
Query: 277 FIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYG 336
FI N+ IDF +VH YPD WF D + + F+ KW+ +HI+D L+KP+ E+G
Sbjct: 263 FIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFG 322
Query: 337 LSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396
S G+ P+ RD ++ T+ +Y SAKR + AG L WQL V G++ + D +GI+ +
Sbjct: 323 KSMKKPGYTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQLLVNGIDNFQDGYGIILSQ 382
Query: 397 RTSTYKLLTEQSCGLGRISRL 417
+ST ++++QS L I ++
Sbjct: 383 SSSTVNVISQQSRKLTLIRKI 403
|
|
| TAIR|locus:2103262 AT3G10890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 161/376 (42%), Positives = 238/376 (63%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
GFV+R G F+L+GK Y NG+N+YWL A +R ++ + Q LT+ RTW F
Sbjct: 30 GFVSRKGVQFILNGKPFYANGFNAYWLAYEATDSTTRFKITYVFQNATIHDLTIVRTWGF 89
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
DGGY +LQI+PG +DE+ F+ LD I EA++ G++++++ VNN +GG+ QYV+WA
Sbjct: 90 RDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRKQYVDWAKN 149
Query: 160 EGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
G + + +Y+K++VKT++ R NT T VEY+++PTI WEL+NEP+C +
Sbjct: 150 TGQNVSSDDDFYTNPL-VKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRA 208
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLT-VNPEMWASALGSDFI 278
DPSG TL W++EM+ +VKS+D KHL++ GLEGFYG SP+R T +NP + A+ LG+DFI
Sbjct: 209 DPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNP-VAANVLGTDFI 267
Query: 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338
N D IDFAS+H YPD WF +L+ + L + KW+ H+ED L KP+ E+G
Sbjct: 268 ANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFGKP 327
Query: 339 NLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERT 398
G+ + RD ++ D +Y+SA++ AGAL W + +GM + D IV E +
Sbjct: 328 TNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGALFWHVISDGMNNFKDPLSIVLSENS 387
Query: 399 STYKLLTEQSCGLGRI 414
+T ++TE+S LG I
Sbjct: 388 TTVNIITEESRKLGLI 403
|
|
| TAIR|locus:2103197 AT3G10900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 170/400 (42%), Positives = 245/400 (61%)
Query: 18 CVAFIYMSFGGLNVSY---PKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDY 74
C+ FI + + SY P GFV+RNG F+L+GK Y NG+N+YWL A
Sbjct: 3 CLCFIVLLAIVIAQSYVGVEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPT 62
Query: 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGG-YNSLQISPGQFDERVFKALDHVIVEARKNG 133
+R ++ + Q +GLT+ RTW F DG Y +LQ +PG +DE+ F+ LD VI EA++ G
Sbjct: 63 TRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIG 122
Query: 134 VRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKN 193
++L++ LVNN YGGK QYV+WA +G + I ++K++VKTVL R N
Sbjct: 123 IKLIILLVNNWDDYGGKKQYVDWARSKG-EVVSSNDDFYRNPVIKDFYKNHVKTVLNRVN 181
Query: 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF 253
T T V Y+++P I AW+L+NEPRC D SG TL DWI+EM+ FVKS+D HL++ G EGF
Sbjct: 182 TFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGF 241
Query: 254 YGPKSPKRL-TVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVT 312
YG SP+R ++NP + A+ +G+DFI N N D IDFAS+H D WF L+ L F+
Sbjct: 242 YGDSSPERKNSLNP-VSANTVGADFIANHNIDAIDFASMHCGSDLWFQRLDQNSRLAFIK 300
Query: 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372
+W+ HIED L KPV E+GL + + + RD ++ T DI+Y SA++ S AG
Sbjct: 301 RWLEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAG 360
Query: 373 ALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLG 412
AL W++ EGM + I+ +++ST +++E + +G
Sbjct: 361 ALFWEVISEGMSNFAGPSSIILSDKSSTVNIISEHARKMG 400
|
|
| TAIR|locus:2204878 MAN1 "endo-beta-mannanase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 163/378 (43%), Positives = 232/378 (61%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYS--RARVGAMLQAGAKMGLTVCRTW 97
GFV RNGT F+L+G+ +Y+NG+N+YW+M A S RA V L+ + +G+ V R W
Sbjct: 28 GFVGRNGTQFVLNGEQVYLNGFNAYWMMTTAADTASKGRATVTTALRQASAVGMNVARIW 87
Query: 98 AFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWA 157
FN+G Y LQISPG + E VFK LD V+ EA + ++L++SLVNN + YGG+ +YV WA
Sbjct: 88 GFNEGDYIPLQISPGSYSEDVFKGLDFVVYEAGRFNIKLIISLVNNFEDYGGRKKYVEWA 147
Query: 158 WEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRC 217
G+ + +++K++VKTVLTRKNTITG Y++DPTIF+WELINEPRC
Sbjct: 148 -----GLDEPDEFYTNSA-VKQFYKNHVKTVLTRKNTITGRMYKDDPTIFSWELINEPRC 201
Query: 218 MSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDF 277
+ + LQDW+ EM+++VKSID HL+ +GLEGFYG P+R NP G+DF
Sbjct: 202 NDSTASNILQDWVKEMASYVKSIDSNHLLEIGLEGFYGESIPERTVYNPG-GRVLTGTDF 260
Query: 278 IRNSNNDNIDFASVHIYPDHWF---HDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTE 334
I N+ +IDFA++HIYPD W E D FV +W+ +HIED D + KP+ TE
Sbjct: 261 ITNNQIPDIDFATIHIYPDSWLPLQSSRTGEQDT-FVDRWIGAHIEDCDNIIKKPLLITE 319
Query: 335 YGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGI-V 393
+G S+ GF R+K ++ + D++Y SA+ S G + WQL D + + +
Sbjct: 320 FGKSSKYPGFSLEKRNKFFQRVYDVIYDSARAGGSCTGGVFWQLTTNRTGLLGDGYEVFM 379
Query: 394 PWERTSTYKLLTEQSCGL 411
+T +L+ +QS L
Sbjct: 380 QAGPNTTAQLIADQSSKL 397
|
|
| ASPGD|ASPL0000036201 AN3358 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 89/270 (32%), Positives = 128/270 (47%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
F T +G F++DG+A Y G N+YW+ + + V + A GL + R W FN
Sbjct: 45 FATTSGIQFVIDGEAGYFPGSNAYWIGFLK----NNSDVDLVFDHMASSGLRILRVWGFN 100
Query: 101 D------GGYNSLQI-SPGQFDERVFK----ALDHVIVEARKNGVRLLLSLVNNLQAYGG 149
D G Q+ G+ K LD+V+ A K+G++L+++ VN YGG
Sbjct: 101 DVNTAPTDGSVYFQLHQDGKSTINTGKDGLQRLDYVVHSAEKHGIKLIINFVNYWDDYGG 160
Query: 150 KTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW 209
Y+ A+ G I ++ YV+ V+ R Y N +FAW
Sbjct: 161 MNAYMR-AYGGG-----DKADWFENEGIQAAYQAYVEAVVKR--------YINSTAVFAW 206
Query: 210 ELINEPRCMS-DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEM 268
EL NEPRC +PS L +WI++ SAF+K +D+KHLV +G +G G P + T
Sbjct: 207 ELANEPRCTGCEPS--VLHNWIEKTSAFIKGLDEKHLVCIG-DGSDG-SYPFQYTE---- 258
Query: 269 WASALGSDFIRNSNNDNIDFASVHIYPDHW 298
GSDF D IDF + H+YPD W
Sbjct: 259 -----GSDFAAALTIDTIDFGTFHLYPDSW 283
|
|
| UNIPROTKB|Q5B7X2 manA "Mannan endo-1,4-beta-mannosidase A" [Aspergillus nidulans FGSC A4 (taxid:227321)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 89/270 (32%), Positives = 128/270 (47%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
F T +G F++DG+A Y G N+YW+ + + V + A GL + R W FN
Sbjct: 45 FATTSGIQFVIDGEAGYFPGSNAYWIGFLK----NNSDVDLVFDHMASSGLRILRVWGFN 100
Query: 101 D------GGYNSLQI-SPGQFDERVFK----ALDHVIVEARKNGVRLLLSLVNNLQAYGG 149
D G Q+ G+ K LD+V+ A K+G++L+++ VN YGG
Sbjct: 101 DVNTAPTDGSVYFQLHQDGKSTINTGKDGLQRLDYVVHSAEKHGIKLIINFVNYWDDYGG 160
Query: 150 KTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW 209
Y+ A+ G I ++ YV+ V+ R Y N +FAW
Sbjct: 161 MNAYMR-AYGGG-----DKADWFENEGIQAAYQAYVEAVVKR--------YINSTAVFAW 206
Query: 210 ELINEPRCMS-DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEM 268
EL NEPRC +PS L +WI++ SAF+K +D+KHLV +G +G G P + T
Sbjct: 207 ELANEPRCTGCEPS--VLHNWIEKTSAFIKGLDEKHLVCIG-DGSDG-SYPFQYTE---- 258
Query: 269 WASALGSDFIRNSNNDNIDFASVHIYPDHW 298
GSDF D IDF + H+YPD W
Sbjct: 259 -----GSDFAAALTIDTIDFGTFHLYPDSW 283
|
|
| ASPGD|ASPL0000003297 manC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 115/329 (34%), Positives = 150/329 (45%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
GFVT G F LDGK Y G N+Y+ + ++ + +G L A K GL V RTW F
Sbjct: 21 GFVTTKGDKFQLDGKDFYFAGSNAYYFPFN--NNQTDVELG--LSAAKKAGLLVFRTWGF 76
Query: 100 NDGGYNSLQISPGQFD-------ERVFK------------ALDHVIVEARKNGVRLLLSL 140
ND ++ Q+ E VF+ D V+ A K G++L+++L
Sbjct: 77 NDKNVTYIEDGLPQYGGEGAGTTEVVFQWWQNGTSTIDLEPFDKVVNAAAKTGIKLIVTL 136
Query: 141 VNNLQAYGGKTQY-VNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVE 199
VNN YGG Y VN +G I K +K YVK ++TR
Sbjct: 137 VNNWADYGGMDVYTVN------LG-GQYHDDFYRLPQIKKAYKRYVKEMVTR-------- 181
Query: 200 YRNDPTIFAWELINEPRCMSD-----PSGDT-----LQDWIDEMSAFVKSIDKKHLVTVG 249
YRN P I AWEL NEPRC +D P+ D L WIDEMS +VK +D HLVT G
Sbjct: 182 YRNSPAIMAWELANEPRCGADGVRNLPASDECTPELLTSWIDEMSTYVKRLDPHHLVTWG 241
Query: 250 LEGFYGPKSPKRLTVNPEMWA--SALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDD 307
EG + S + WA + G DF NIDF H YPD W +E+ +
Sbjct: 242 GEGGFNYDS--------DDWAYNGSDGGDFEAELKLKNIDFGVFHSYPDWWSKTVEWTN- 292
Query: 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYG 336
KW++ H + + KPV EYG
Sbjct: 293 -----KWIVDHARAA-RRVGKPVVHEEYG 315
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q7Y223 | MAN2_ARATH | 3, ., 2, ., 1, ., 7, 8 | 0.7494 | 0.9930 | 0.9861 | yes | no |
| Q9M0H6 | MAN5_ARATH | 3, ., 2, ., 1, ., 7, 8 | 0.7209 | 0.9976 | 0.9953 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 430 | |||
| COG3934 | 587 | COG3934, COG3934, Endo-beta-mannanase [Carbohydrat | 1e-26 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 1e-07 | |
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 4e-05 | |
| pfam12876 | 87 | pfam12876, Cellulase-like, Sugar-binding cellulase | 0.002 |
| >gnl|CDD|226444 COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 1e-26
Identities = 66/290 (22%), Positives = 104/290 (35%), Gaps = 58/290 (20%)
Query: 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFF 173
+ A +++L++L+ L+ GG + WA E+ S D+ +
Sbjct: 61 NAGSNVWYAAWFLAPAGYLDLKVLITLIVGLKHMGGTNWRIPWAGEQ------SPDNVIY 114
Query: 174 DPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEM 233
DP K YV+ ++ Y+ DPTI W L NEP + S + DW EM
Sbjct: 115 DPKFRGPGKKYVEDLVK--------PYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEM 166
Query: 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNI-DFASVH 292
A++K +D HLV+VG P N D+A+ H
Sbjct: 167 YAYIKWLDDGHLVSVGDPASPWP--------------------QYAPYNARFYVDYAANH 206
Query: 293 IYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKL 352
+Y H+ L + T + +++ +PV E+G S
Sbjct: 207 LYR-HYDTSLV----SRVSTVYGKPYLDIPTIMGWQPVNLEEFGFSTAF----GQENSPA 257
Query: 353 YKTILDIVYKSAKRKRSGAGALIWQL--FVEG-------MEEYNDDFGIV 393
Y + + + G GALIW L F G +FGI+
Sbjct: 258 YFIWIRLALDTG-----GDGALIWCLSDFHLGSDDSEYTWGPMELEFGII 302
|
Length = 587 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 17/139 (12%)
Query: 202 NDPTIFAWELINEPRCM-SDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK 260
+ +EL+NEP + D ++D+ E +++ +L+ VG GP
Sbjct: 115 GNNPNVIFELMNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVG-----GPS--- 166
Query: 261 RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320
W+ + + N+D+ SVH Y F F + K L
Sbjct: 167 --------WSQNPDGAALNDPNDDDNLIYSVHFYAPSHFSGTWFGCEDKTNLAQRLRAAA 218
Query: 321 DGDKELNKPVFFTEYGLSN 339
+ + PVF E+G N
Sbjct: 219 NYALDNGIPVFIGEFGGGN 237
|
Length = 269 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 46/271 (16%), Positives = 74/271 (27%), Gaps = 52/271 (19%)
Query: 87 AKMGLTVCR----TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142
G R WA +P K LD I A+K G+ +L+ L
Sbjct: 83 KSAGFNAVRIPIGYWALQATDG----DNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHG 138
Query: 143 NLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202
GG G S + + + K + R ++N
Sbjct: 139 ---YPGG---------NNGHEHSGYTSDYKEENENVEATIDIWKFIANR--------FKN 178
Query: 203 DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFV----KSIDKKHLV-TVGLEG-FYGP 256
T+ +ELINEP T + W +I + + G
Sbjct: 179 YDTVIGFELINEPN-----GIVTSETWNGGDDEAYDVVRNAILSNAPHWLIRVGGQGLNG 233
Query: 257 KSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIY-----------PDHWFHDLEFE 305
+I +D A+ H+Y W EF+
Sbjct: 234 WRVIMAHTYGSSDGGNDNGVYIVP-VDDPGLTANKHLYAPHVYGDDVLNGGSWTVGGEFD 292
Query: 306 DDLKFVTKWMLSHIEDGDKELNKPVFFTEYG 336
W L+++ G ++ P E+G
Sbjct: 293 LAETDCAIW-LNYVGHGARKNGYPTVIGEFG 322
|
Length = 407 |
| >gnl|CDD|221824 pfam12876, Cellulase-like, Sugar-binding cellulase-like | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.002
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 29/105 (27%)
Query: 199 EYRNDPTIFAWELINEPRCM---------SDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249
++ D I W+L NEP S + + L + E+ +++++D VT G
Sbjct: 3 QFGYDDRILGWDLCNEPPGSPARAYPAEWSAAAVERLLRLLKEIFRWLRAVDPSQPVTAG 62
Query: 250 LEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIY 294
+ G + + +D S H Y
Sbjct: 63 VWA--GDLEA------------------LEELQLEELDVISFHNY 87
|
This is a putative cellulase family. Length = 87 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 430 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 99.97 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.96 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.94 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.9 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.87 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 99.86 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.86 | |
| PLN02998 | 497 | beta-glucosidase | 99.86 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 99.86 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 99.86 | |
| PLN02814 | 504 | beta-glucosidase | 99.85 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 99.85 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 99.85 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 99.85 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 99.84 | |
| PLN02849 | 503 | beta-glucosidase | 99.84 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 99.83 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 99.81 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 99.81 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.64 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 99.64 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 99.59 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 99.59 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 99.55 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 99.52 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 99.5 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 99.48 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 99.39 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.35 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 99.22 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.18 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.16 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.99 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.81 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 98.79 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 98.61 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.49 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 98.45 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 98.44 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 98.26 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 97.67 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 97.5 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 97.49 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 97.37 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 97.0 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 96.79 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 96.41 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 96.16 | |
| PLN00197 | 573 | beta-amylase; Provisional | 96.05 | |
| PLN02161 | 531 | beta-amylase | 95.96 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 95.95 | |
| PLN02705 | 681 | beta-amylase | 95.89 | |
| PLN02801 | 517 | beta-amylase | 95.87 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 95.86 | |
| PLN02905 | 702 | beta-amylase | 95.84 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 95.81 | |
| PLN02803 | 548 | beta-amylase | 95.79 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 95.69 | |
| COG3534 | 501 | AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra | 95.66 | |
| PF12891 | 239 | Glyco_hydro_44: Glycoside hydrolase family 44; Int | 95.51 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 95.33 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 95.02 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 94.87 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 94.76 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 94.68 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 94.54 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 94.48 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 94.47 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 93.71 | |
| PLN02960 | 897 | alpha-amylase | 93.39 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 93.38 | |
| COG3664 | 428 | XynB Beta-xylosidase [Carbohydrate transport and m | 93.24 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 93.17 | |
| cd06545 | 253 | GH18_3CO4_chitinase The Bacteroides thetaiotaomicr | 92.98 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 92.73 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 92.5 | |
| PLN02361 | 401 | alpha-amylase | 91.75 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 90.99 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 90.97 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 90.96 | |
| COG3623 | 287 | SgaU Putative L-xylulose-5-phosphate 3-epimerase [ | 90.68 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 90.67 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 90.15 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 89.48 | |
| cd06570 | 311 | GH20_chitobiase-like_1 A functionally uncharacteri | 89.35 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 89.3 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 89.17 | |
| KOG2566 | 518 | consensus Beta-glucocerebrosidase [Carbohydrate tr | 89.16 | |
| PF00728 | 351 | Glyco_hydro_20: Glycosyl hydrolase family 20, cata | 89.06 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 88.98 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 88.97 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 88.83 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 88.82 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 86.68 | |
| cd06547 | 339 | GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG | 86.62 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 86.56 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 86.49 | |
| PF07488 | 328 | Glyco_hydro_67M: Glycosyl hydrolase family 67 midd | 86.4 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 86.1 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 85.54 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 85.39 | |
| PLN02784 | 894 | alpha-amylase | 84.88 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 84.13 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 83.9 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 83.74 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 83.63 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 83.2 | |
| PF03659 | 386 | Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int | 83.01 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 83.0 | |
| PF14883 | 294 | GHL13: Hypothetical glycosyl hydrolase family 13 | 82.78 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 82.31 | |
| PRK13398 | 266 | 3-deoxy-7-phosphoheptulonate synthase; Provisional | 82.24 | |
| PRK09856 | 275 | fructoselysine 3-epimerase; Provisional | 81.63 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 81.54 | |
| PF07555 | 306 | NAGidase: beta-N-acetylglucosaminidase ; InterPro: | 80.63 | |
| PF01261 | 213 | AP_endonuc_2: Xylose isomerase-like TIM barrel; In | 80.1 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 80.08 | |
| COG3661 | 684 | AguA Alpha-glucuronidase [Carbohydrate transport a | 80.02 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=243.71 Aligned_cols=265 Identities=25% Similarity=0.408 Sum_probs=184.8
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc-cCCC-CCChHHHHHHHHHHHHH
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ-ISPG-QFDERVFKALDHVIVEA 129 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~-~~pg-~~de~~l~~lD~~l~~A 129 (430)
+|+++.+.|+|.+|... ...+++|+.++++|+|+||+++. |..++ +.|+ .++++.+++||++|++|
T Consensus 4 ~G~~v~~~G~n~~w~~~--------~~~~~~~~~~~~~G~n~VRi~v~----~~~~~~~~~~~~~~~~~~~~ld~~v~~a 71 (281)
T PF00150_consen 4 NGKPVNWRGFNTHWYNP--------SITEADFDQLKALGFNTVRIPVG----WEAYQEPNPGYNYDETYLARLDRIVDAA 71 (281)
T ss_dssp TSEBEEEEEEEETTSGG--------GSHHHHHHHHHHTTESEEEEEEE----STSTSTTSTTTSBTHHHHHHHHHHHHHH
T ss_pred CCCeEEeeeeecccCCC--------CCHHHHHHHHHHCCCCEEEeCCC----HHHhcCCCCCccccHHHHHHHHHHHHHH
Confidence 89999999999885432 25889999999999999999775 44454 4555 58999999999999999
Q ss_pred HHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEE
Q 014151 130 RKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW 209 (430)
Q Consensus 130 ~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~w 209 (430)
+++||+|||++|.. +.|.. ....+...+...+.+.++|+.+++| |+++|.|++|
T Consensus 72 ~~~gi~vild~h~~----------~~w~~--------~~~~~~~~~~~~~~~~~~~~~la~~--------y~~~~~v~~~ 125 (281)
T PF00150_consen 72 QAYGIYVILDLHNA----------PGWAN--------GGDGYGNNDTAQAWFKSFWRALAKR--------YKDNPPVVGW 125 (281)
T ss_dssp HHTT-EEEEEEEES----------TTCSS--------STSTTTTHHHHHHHHHHHHHHHHHH--------HTTTTTTEEE
T ss_pred HhCCCeEEEEeccC----------ccccc--------cccccccchhhHHHHHhhhhhhccc--------cCCCCcEEEE
Confidence 99999999999874 12210 0111223456788899999999999 9999999999
Q ss_pred eecCCCCCCCCC------ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCC
Q 014151 210 ELINEPRCMSDP------SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNN 283 (430)
Q Consensus 210 el~NEp~~~~~~------~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~ 283 (430)
||+|||...... ..+.+.+|++++.++||+++|+++|+++..++... +... ........
T Consensus 126 el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~~~~~~---------~~~~------~~~~P~~~ 190 (281)
T PF00150_consen 126 ELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGGGWGAD---------PDGA------AADNPNDA 190 (281)
T ss_dssp ESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEHHHHTB---------HHHH------HHHSTTTT
T ss_pred EecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCCccccc---------cchh------hhcCcccc
Confidence 999999986431 13678899999999999999999999985332110 0000 00000113
Q ss_pred CCcceEEeeecCCCCCCCcc----hhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHH
Q 014151 284 DNIDFASVHIYPDHWFHDLE----FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDI 359 (430)
Q Consensus 284 ~~iD~~s~H~Y~~~w~~~~~----~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~ 359 (430)
...+++++|.|++ +..... ...........+......+.+ .++||+|||||....... ...++...+++.
T Consensus 191 ~~~~~~~~H~Y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~pv~~gE~G~~~~~~~----~~~~~~~~~~~~ 264 (281)
T PF00150_consen 191 DNNDVYSFHFYDP-YDFSDQWNPGNWGDASALESSFRAALNWAKK-NGKPVVVGEFGWSNNDGN----GSTDYADAWLDY 264 (281)
T ss_dssp TTSEEEEEEEETT-TCHHTTTSTCSHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEESSTTTSC----HHHHHHHHHHHH
T ss_pred cCceeEEeeEeCC-CCcCCccccccchhhhHHHHHHHHHHHHHHH-cCCeEEEeCcCCcCCCCC----cCHHHHHHHHHH
Confidence 4677999999985 221110 011123344556666666664 899999999999754311 233444444444
Q ss_pred HHHHHhcCCCcccceeeeeccC
Q 014151 360 VYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 360 ~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.+ ...|+++|+|+.+
T Consensus 265 ~~~------~~~g~~~W~~~~~ 280 (281)
T PF00150_consen 265 LEQ------NGIGWIYWSWKPN 280 (281)
T ss_dssp HHH------TTCEEEECEESSS
T ss_pred HHH------CCCeEEEEecCCC
Confidence 432 2689999999875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=246.97 Aligned_cols=295 Identities=25% Similarity=0.372 Sum_probs=217.9
Q ss_pred EEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC-hHHHHHHHHHHH
Q 014151 49 FMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD-ERVFKALDHVIV 127 (430)
Q Consensus 49 f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d-e~~l~~lD~~l~ 127 (430)
|.++++.+.+.+.+.+|..+. .+.++++++.++.+|++++|+|. -||.. .....|.-+ +..+.+++++++
T Consensus 4 F~Lg~n~wprIanikmw~~~~------~~ei~~dle~a~~vg~k~lR~fi-LDgEd--c~d~~G~~na~s~~~y~~~fla 74 (587)
T COG3934 4 FALGLNRWPRIANIKMWPAIG------NREIKADLEPAGFVGVKDLRLFI-LDGED--CRDKEGYRNAGSNVWYAAWFLA 74 (587)
T ss_pred EEeccccchhhhhhhHHHHhh------hhhhhcccccccCccceeEEEEE-ecCcc--hhhhhceecccccHHHHHHHhh
Confidence 556666666666665665543 47899999999999999999984 35421 222334434 445999999999
Q ss_pred HHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCcee
Q 014151 128 EARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIF 207 (430)
Q Consensus 128 ~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~ 207 (430)
.|..++|+|+++|.+.|.++||++++..|+ |. ..+.+++.|+..+.-+++|+..+|+. ||.+|+|+
T Consensus 75 ~a~~l~lkvlitlivg~~hmgg~Nw~Ipwa---g~---~~pdn~iyD~k~~~~~kkyvedlVk~--------yk~~ptI~ 140 (587)
T COG3934 75 PAGYLDLKVLITLIVGLKHMGGTNWRIPWA---GE---QSPDNVIYDPKFRGPGKKYVEDLVKP--------YKLDPTIA 140 (587)
T ss_pred hcccCcceEEEEEeecccccCcceeEeecC---CC---CCccccccchhhcccHHHHHHHHhhh--------hccChHHH
Confidence 999999999999999999999999999997 33 45678899999999999999999998 99999999
Q ss_pred EEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcc
Q 014151 208 AWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNID 287 (430)
Q Consensus 208 ~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD 287 (430)
+|.+.|||.+....+...+..|..+|.++||.+||+|+|++|.+++.- +. +.|. -.-..+|
T Consensus 141 gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hlvsvGD~~sp~---~~---~~py-------------N~r~~vD 201 (587)
T COG3934 141 GWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHLVSVGDPASPW---PQ---YAPY-------------NARFYVD 201 (587)
T ss_pred HHHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCeeecCCcCCcc---cc---cCCc-------------ccceeec
Confidence 999999999876667899999999999999999999999999765421 10 0110 0123689
Q ss_pred eEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCC-CcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhc
Q 014151 288 FASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELN-KPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKR 366 (430)
Q Consensus 288 ~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~g-kPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 366 (430)
+.++|.|+ +|..+. ..++...|...++...+. .| +||+++|||.+...... +-.-+..+....++.
T Consensus 202 ya~~hLY~-hyd~sl----~~r~s~~yg~~~l~i~~~-~g~~pV~leefGfsta~g~e----~s~ayfiw~~lal~~--- 268 (587)
T COG3934 202 YAANHLYR-HYDTSL----VSRVSTVYGKPYLDIPTI-MGWQPVNLEEFGFSTAFGQE----NSPAYFIWIRLALDT--- 268 (587)
T ss_pred cccchhhh-hccCCh----hheeeeeecchhhccchh-cccceeeccccCCccccccc----ccchhhhhhhhHHhh---
Confidence 99999998 454321 123334556666677765 77 99999999998875321 112222333323332
Q ss_pred CCCcccceeeeeccCCC------ccC---CCCceEEcCCCccH
Q 014151 367 KRSGAGALIWQLFVEGM------EEY---NDDFGIVPWERTST 400 (430)
Q Consensus 367 ~~~~~G~~~W~~~~~~~------~~~---~dg~~i~~~~~~~~ 400 (430)
+..|+++||+.+... .+| ..+|+|.-.|+|..
T Consensus 269 --ggdGaLiwclsdf~~gsdd~ey~w~p~el~fgiIradgpek 309 (587)
T COG3934 269 --GGDGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRADGPEK 309 (587)
T ss_pred --cCCceEEEEecCCccCCCCCCCccccccceeeeecCCCchh
Confidence 478999999998642 234 36788887776644
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-25 Score=235.79 Aligned_cols=289 Identities=17% Similarity=0.310 Sum_probs=192.5
Q ss_pred CCCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 37 PEMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 37 ~~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
.+.|| |+++++.|++||+|++++|+|.|..........+.+.++++|+.||++|+|+||+.. ++.
T Consensus 271 ~~~GfR~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh-----~p~-------- 337 (604)
T PRK10150 271 LRFGIRSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSH-----YPY-------- 337 (604)
T ss_pred eeeEEEEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEecc-----CCC--------
Confidence 45688 666789999999999999999876543322345788899999999999999999932 210
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcc---cCCCcchhhhhhhhhCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHh
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQ---AYGGKTQYVNWAWEEGIGISSSN-DSFFFDPSIHKYFKHYVKTVLT 190 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~---~~gg~~~y~~W~~~~G~~~~~~~-~~f~~d~~~~~~~~~~~~~lv~ 190 (430)
+ .+++++|+++||+|+-.+.. |. ..+.. + .+ + ...... .....+|+.++.+++.++.++.
T Consensus 338 ~-------~~~~~~cD~~GllV~~E~p~-~~~~~~~~~~--~-~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~mv~ 401 (604)
T PRK10150 338 S-------EEMLDLADRHGIVVIDETPA-VGLNLSFGAG--L-EA----G-NKPKETYSEEAVNGETQQAHLQAIRELIA 401 (604)
T ss_pred C-------HHHHHHHHhcCcEEEEeccc-cccccccccc--c-cc----c-ccccccccccccchhHHHHHHHHHHHHHH
Confidence 1 26799999999999876532 21 01100 0 00 0 000000 0112357889999999999999
Q ss_pred ccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchh
Q 014151 191 RKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWA 270 (430)
Q Consensus 191 R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~ 270 (430)
| ++|||+|++|.++||+... .+....|+++|.+.+|++||+|+|+.+.... . .+ ++
T Consensus 402 r--------~~NHPSIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~-~--~~-----~~---- 457 (604)
T PRK10150 402 R--------DKNHPSVVMWSIANEPASR----EQGAREYFAPLAELTRKLDPTRPVTCVNVMF-A--TP-----DT---- 457 (604)
T ss_pred h--------ccCCceEEEEeeccCCCcc----chhHHHHHHHHHHHHHhhCCCCceEEEeccc-C--Cc-----cc----
Confidence 9 9999999999999998753 2356789999999999999999999875211 0 00 00
Q ss_pred hccCcchhhccCCCCcceEEeeecCCCCCC-CcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC-------CC
Q 014151 271 SALGSDFIRNSNNDNIDFASVHIYPDHWFH-DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL-------IK 342 (430)
Q Consensus 271 ~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~-~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~-------~~ 342 (430)
....+.+|++++|.|+. |.. .++.. ....++...+....+..+||++++|||+... ..
T Consensus 458 ---------~~~~~~~Dv~~~N~Y~~-wy~~~~~~~----~~~~~~~~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~~ 523 (604)
T PRK10150 458 ---------DTVSDLVDVLCLNRYYG-WYVDSGDLE----TAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDD 523 (604)
T ss_pred ---------ccccCcccEEEEcccce-ecCCCCCHH----HHHHHHHHHHHHHHHhcCCCEEEEccCCccccccccCCCC
Confidence 01235689999999886 432 12211 1122233322222222489999999996542 12
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC----CCccC-CCCceEEcCC
Q 014151 343 GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE----GMEEY-NDDFGIVPWE 396 (430)
Q Consensus 343 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~----~~~~~-~dg~~i~~~~ 396 (430)
..+++.+..+++..++.+.+ .+.++|.++|+|.|. +...+ ++..+|+..+
T Consensus 524 ~~~ee~q~~~~~~~~~~~~~----~p~~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~d 578 (604)
T PRK10150 524 MWSEEYQCAFLDMYHRVFDR----VPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRD 578 (604)
T ss_pred CCCHHHHHHHHHHHHHHHhc----CCceEEEEEEeeeccCCCCCCcccCCCcceeEcCC
Confidence 34688888888877765543 357999999999983 22111 2556777554
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-22 Score=193.67 Aligned_cols=158 Identities=22% Similarity=0.309 Sum_probs=112.9
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHH
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~ 121 (430)
|.+++++|++||||++++|+|.+..........+.+.++++|+.||++|+|+||+... + +.
T Consensus 1 vev~~~~~~lNGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~-----p---~~----------- 61 (298)
T PF02836_consen 1 VEVKDGGFYLNGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHY-----P---PS----------- 61 (298)
T ss_dssp EEEETTEEEETTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS----------S-----------
T ss_pred CEEECCEEEECCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccc-----c---Cc-----------
Confidence 6899999999999999999997653322223457899999999999999999999432 1 11
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
.+++++|+++||.|+..+... .++ .|.. .| .......+++.++.+++.++.++.| ++
T Consensus 62 -~~~~~~cD~~GilV~~e~~~~--~~~------~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~v~~--------~~ 118 (298)
T PF02836_consen 62 -PRFYDLCDELGILVWQEIPLE--GHG------SWQD-FG-----NCNYDADDPEFRENAEQELREMVRR--------DR 118 (298)
T ss_dssp -HHHHHHHHHHT-EEEEE-S-B--SCT------SSSS-TS-----CTSCTTTSGGHHHHHHHHHHHHHHH--------HT
T ss_pred -HHHHHHHhhcCCEEEEecccc--ccC------cccc-CC-----ccccCCCCHHHHHHHHHHHHHHHHc--------Cc
Confidence 267999999999998776431 011 0100 00 0012245788999999999999999 99
Q ss_pred CCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 202 NDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 202 ~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|||+|++|.++||+ ....+++++.+.+|++||+|+|+.++
T Consensus 119 NHPSIi~W~~gNE~---------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 119 NHPSIIMWSLGNES---------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp T-TTEEEEEEEESS---------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred CcCchheeecCccC---------ccccchhHHHHHHHhcCCCCceeecc
Confidence 99999999999999 35677899999999999999999864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-21 Score=194.66 Aligned_cols=279 Identities=14% Similarity=0.218 Sum_probs=188.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+-+ +|+.++|. +|.+|++.++.+|.+|+.|.++||.+|++|++ |+ .
T Consensus 52 ~y~~y~eDi~l~~~~G~~~~R~si----~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~H-fd-------~ 119 (427)
T TIGR03356 52 HYHRYEEDVALMKELGVDAYRFSI----AWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYH-WD-------L 119 (427)
T ss_pred HHHhHHHHHHHHHHcCCCeEEccc----chhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeecc-CC-------c
Confidence 357899999999999999999822 59999998 68899999999999999999999999999986 43 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------C---
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------P--- 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~--- 221 (430)
|.|....|+ |.+++..+.|.+|++.+++| |++ .|-.|++.|||..... +
T Consensus 120 P~~l~~~gG---------w~~~~~~~~f~~ya~~~~~~--------~~d--~v~~w~t~NEp~~~~~~~y~~G~~~P~~~ 180 (427)
T TIGR03356 120 PQALEDRGG---------WLNRDTAEWFAEYAAVVAER--------LGD--RVKHWITLNEPWCSAFLGYGLGVHAPGLR 180 (427)
T ss_pred cHHHHhcCC---------CCChHHHHHHHHHHHHHHHH--------hCC--cCCEEEEecCcceecccchhhccCCCCCc
Confidence 566544332 77899999999999999999 998 5777999999985321 0
Q ss_pred ChH-H------HHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCcchh
Q 014151 222 SGD-T------LQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGSDFI 278 (430)
Q Consensus 222 ~~~-~------~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~df~ 278 (430)
+.. . +..-..+..+++|+..|+..|.+-....+.. |.. .+|. .|.. ..| ++.
T Consensus 181 ~~~~~~~~~hnll~Aha~A~~~~~~~~~~~~IGi~~~~~~~~--P~~--~~~~d~~aa~~~~~~~~~~f~d~~~~G-~yP 255 (427)
T TIGR03356 181 DLRAALQAAHHLLLAHGLAVQALRANGPGAQVGIVLNLTPVY--PAS--DSPEDVAAARRADGLLNRWFLDPLLKG-RYP 255 (427)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeee--eCC--CCHHHHHHHHHHHHHHhhhhhHHHhCC-CCC
Confidence 101 1 1112345667788888876665433221111 100 0111 1110 011 110
Q ss_pred ----h-------------ccCCCCcceEEeeecCCCCCCCc------------chh-hhHHH--HHHHHHHHHHhhhhcC
Q 014151 279 ----R-------------NSNNDNIDFASVHIYPDHWFHDL------------EFE-DDLKF--VTKWMLSHIEDGDKEL 326 (430)
Q Consensus 279 ----~-------------~~~~~~iD~~s~H~Y~~~w~~~~------------~~~-~~~~~--~~~~l~~~~~~a~~~~ 326 (430)
. ......+||+++++|........ ..+ ....| ...-|+..+....+.+
T Consensus 256 ~~~~~~l~~~p~~~~~d~~~l~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~rY 335 (427)
T TIGR03356 256 EDLLEYLGDAPFVQDGDLETIAQPLDFLGINYYTRSVVAADPGTGAGFVEVPEGVPKTAMGWEVYPEGLYDLLLRLKEDY 335 (427)
T ss_pred HHHHHHhccCCCCCHHHHHHhcCCCCEEEEeccccceeccCCCCCCCccccCCCCCcCCCCCeechHHHHHHHHHHHHhc
Confidence 0 00124679999999975421100 000 00001 1122444444443347
Q ss_pred CC-cEEEEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce
Q 014151 327 NK-PVFFTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG 391 (430)
Q Consensus 327 gk-Pv~v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~ 391 (430)
++ ||+|+|.|...... ...+..|..|++++++.+.++..+|..+.|++.|++.|+ .+|.+||.
T Consensus 336 ~~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~ew~~gy~ 403 (427)
T TIGR03356 336 PGPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDN--FEWAEGYS 403 (427)
T ss_pred CCCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccccc--cchhcccc
Confidence 76 79999999975321 134679999999999999999999999999999999998 78877765
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=192.63 Aligned_cols=305 Identities=15% Similarity=0.167 Sum_probs=204.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. ++.+|+++++.++++|+.+.++||.++++|++ |+
T Consensus 71 ~Yhry~eDi~Lm~~lG~~aYRf---SI-sWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H-~d------- 138 (478)
T PRK09593 71 MYHHYKEDIALFAEMGFKTYRM---SI-AWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITH-FD------- 138 (478)
T ss_pred hHHhhHHHHHHHHHcCCCEEEE---ec-chhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecc-cC-------
Confidence 4688999999999999999998 33 59999986 45689999999999999999999999999986 64
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC-----------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----------- 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----------- 220 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.++|||.+...
T Consensus 139 lP~~L~~~~GG---------W~n~~~v~~F~~YA~~~~~~--------fgd--rVk~WiT~NEP~~~~~~~~~~~g~~~~ 199 (478)
T PRK09593 139 CPMHLIEEYGG---------WRNRKMVGFYERLCRTLFTR--------YKG--LVKYWLTFNEINMILHAPFMGAGLYFE 199 (478)
T ss_pred CCHHHHhhcCC---------CCChHHHHHHHHHHHHHHHH--------hcC--cCCEEEeecchhhhhcccccccCcccC
Confidence 26677543 43 88999999999999999999 998 5888999999985311
Q ss_pred C--Ch--HHHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc------------chhh---ccC-
Q 014151 221 P--SG--DTLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE------------MWAS---ALG- 274 (430)
Q Consensus 221 ~--~~--~~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~------------~w~~---~~g- 274 (430)
+ .. ..++.- ...+.+++|+..|+-.|.+-....+.. |.. .+|. .|.. ..|
T Consensus 200 ~g~~~~~~~~~a~h~~llAHa~A~~~~~~~~~~g~VGi~~~~~~~~--P~~--~~~~D~~aa~~~~~~~~~fld~~~~G~ 275 (478)
T PRK09593 200 EGENKEQVKYQAAHHELVASAIATKIAHEVDPENKVGCMLAAGQYY--PNT--CHPEDVWAAMKEDRENYFFIDVQARGE 275 (478)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeE--eCC--CCHHHHHHHHHHHHHhhhhhhhhhCCC
Confidence 0 00 011211 235566788888875554433221111 100 0110 0100 001
Q ss_pred -------------c--chh----hccCCCCcceEEeeecCCCCCCCcc------h---------h--hh--H--HHHHHH
Q 014151 275 -------------S--DFI----RNSNNDNIDFASVHIYPDHWFHDLE------F---------E--DD--L--KFVTKW 314 (430)
Q Consensus 275 -------------~--df~----~~~~~~~iD~~s~H~Y~~~w~~~~~------~---------~--~~--~--~~~~~~ 314 (430)
. .|. ..+....+||+++++|......... . + .. . +....-
T Consensus 276 YP~~~~~~~~~~~~~~~~~~~d~~~ik~g~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~gw~i~P~G 355 (478)
T PRK09593 276 YPNYAKKRFEREGITIEMTEEDLELLKENTVDFISFSYYSSRVASGDPKVNEKTAGNIFASLKNPYLKASEWGWQIDPLG 355 (478)
T ss_pred ccHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCCCCccccccCCCcccCCCCCEECHHH
Confidence 0 000 0011246799999999754321100 0 0 00 0 011122
Q ss_pred HHHHHHhhhhcCCCcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHh-cCCCcccceeeeeccCCCccCCC
Q 014151 315 MLSHIEDGDKELNKPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAK-RKRSGAGALIWQLFVEGMEEYND 388 (430)
Q Consensus 315 l~~~~~~a~~~~gkPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~G~~~W~~~~~~~~~~~d 388 (430)
|+..+....+.+++||+|+|.|+..... ...+..|..|+++++..+.+++. ++..+.|+++|++.|+ .+|..
T Consensus 356 l~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn--~EW~~ 433 (478)
T PRK09593 356 LRITLNTIWDRYQKPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRDAINEDGVELLGYTTWGCIDL--VSAGT 433 (478)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchHh--hcccC
Confidence 4444444433488999999999975321 13477899999999999999985 8999999999999998 88988
Q ss_pred C-----ceEEcCCCc-----cHHHHHHHHHHHHhhccc
Q 014151 389 D-----FGIVPWERT-----STYKLLTEQSCGLGRISR 416 (430)
Q Consensus 389 g-----~~i~~~~~~-----~~~~~~~~~~~~~~~~~~ 416 (430)
| |++++.|-. +..+..|+++..++.+-.
T Consensus 434 G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~ 471 (478)
T PRK09593 434 GEMKKRYGFIYVDRDNEGKGTLKRSKKKSFDWYKKVIA 471 (478)
T ss_pred CCccCeeceEEECCCCCCCcccceecccHHHHHHHHHH
Confidence 8 556554412 235888888888887754
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=188.92 Aligned_cols=271 Identities=20% Similarity=0.321 Sum_probs=151.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
+.+.+++||+.|+++|+|+||+..| .|..+||++|.|| |+.||++|+.|+++||+|||.+... ..|
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~---~W~~lEP~eG~yd---F~~lD~~l~~a~~~Gi~viL~~~~~--------~~P 73 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEF---SWSWLEPEEGQYD---FSWLDRVLDLAAKHGIKVILGTPTA--------APP 73 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CC---EHHHH-SBTTB------HHHHHHHHHHHCTT-EEEEEECTT--------TS-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEe---chhhccCCCCeee---cHHHHHHHHHHHhccCeEEEEeccc--------ccc
Confidence 4689999999999999999998655 3888999999998 7889999999999999999976431 124
Q ss_pred hhhhh----------hCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-
Q 014151 155 NWAWE----------EGIGI--SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP- 221 (430)
Q Consensus 155 ~W~~~----------~G~~~--~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~- 221 (430)
.|... .|... +....-.+.+|.+++.++++++.+++| |+++|+|++|++.|||.+..+.
T Consensus 74 ~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~--------y~~~p~vi~~~i~NE~~~~~~~~ 145 (374)
T PF02449_consen 74 AWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAER--------YGDHPAVIGWQIDNEPGYHRCYS 145 (374)
T ss_dssp HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHH--------HTTTTTEEEEEECCSTTCTS--S
T ss_pred cchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhh--------ccccceEEEEEeccccCcCcCCC
Confidence 55432 12111 011222356789999999999999999 9999999999999999773210
Q ss_pred --------------------------------------------------C-----------hHHHHHHHHHHHHHHHhc
Q 014151 222 --------------------------------------------------S-----------GDTLQDWIDEMSAFVKSI 240 (430)
Q Consensus 222 --------------------------------------------------~-----------~~~~~~w~~~~~~~Ir~~ 240 (430)
. .+.+.++++.+++.||+.
T Consensus 146 ~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~ 225 (374)
T PF02449_consen 146 PACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIREY 225 (374)
T ss_dssp HHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 134556677899999999
Q ss_pred CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC-CCCCcchhhhHHHHHHHHHHHH
Q 014151 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH-WFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 241 dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~-w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
+|+++|+....+... .+.|+.. ....+|+++++.||.. +...........+. ....
T Consensus 226 ~p~~~vt~n~~~~~~-----------------~~~d~~~--~a~~~D~~~~d~Y~~~~~~~~~~~~~~~a~~----~dl~ 282 (374)
T PF02449_consen 226 DPDHPVTTNFMGSWF-----------------NGIDYFK--WAKYLDVVSWDSYPDGSFDFYDDDPYSLAFN----HDLM 282 (374)
T ss_dssp STT-EEE-EE-TT--------------------SS-HHH--HGGGSSSEEEEE-HHHHHTTTT--TTHHHHH----HHHH
T ss_pred CCCceEEeCcccccc-----------------CcCCHHH--HHhhCCcceeccccCcccCCCCCCHHHHHHH----HHHH
Confidence 999999975433100 0112222 1357899999999971 00000011111111 1222
Q ss_pred HhhhhcCCCcEEEEecCCCCCCC-CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCCC
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIK-GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWER 397 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~~ 397 (430)
+.. + .+||++|.|.-....+- ......+...++.+. +.+... +..|.++|+|.......-...++|..-++
T Consensus 283 R~~-~-~~kpf~v~E~~~g~~~~~~~~~~~~pg~~~~~~---~~~~A~--Ga~~i~~~~wr~~~~g~E~~~~g~~~~dg 354 (374)
T PF02449_consen 283 RSL-A-KGKPFWVMEQQPGPVNWRPYNRPPRPGELRLWS---WQAIAH--GADGILFWQWRQSRFGAEQFHGGLVDHDG 354 (374)
T ss_dssp HHH-T-TT--EEEEEE--S--SSSSS-----TTHHHHHH---HHHHHT--T-S-EEEC-SB--SSSTTTTS--SB-TTS
T ss_pred Hhh-c-CCCceEeecCCCCCCCCccCCCCCCCCHHHHHH---HHHHHH--hCCeeEeeeccCCCCCchhhhcccCCccC
Confidence 222 2 79999999996553220 011111222233222 222223 58899999998753322123577777666
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=192.69 Aligned_cols=306 Identities=15% Similarity=0.203 Sum_probs=203.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.||++|+|+.|+ +. +|++++|. .|.+|+++++.++++|+.+.++||.+++||++ |+ .
T Consensus 80 ~Yhry~EDi~lmk~lG~~~YRf---SI-sWsRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H-~d-------l 147 (497)
T PLN02998 80 QYHKYKEDVKLMADMGLEAYRF---SI-SWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHH-FD-------L 147 (497)
T ss_pred HHHhhHHHHHHHHHcCCCeEEe---ec-cHHhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecC-CC-------C
Confidence 4678999999999999999998 33 59999985 56799999999999999999999999999986 64 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------CCh
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------PSG 223 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~~~ 223 (430)
|.|.... |+ |.+++..+.|.+|.+.+++| |+| .|--|.++|||.+... +..
T Consensus 148 P~~L~~~yGG---------W~n~~~v~~F~~YA~~~~~~--------fgd--rVk~WiT~NEP~~~~~~gy~~G~~~Pg~ 208 (497)
T PLN02998 148 PQALEDEYGG---------WLSQEIVRDFTAYADTCFKE--------FGD--RVSHWTTINEVNVFALGGYDQGITPPAR 208 (497)
T ss_pred CHHHHHhhCC---------cCCchHHHHHHHHHHHHHHH--------hcC--cCCEEEEccCcchhhhcchhhcccCCCc
Confidence 5677653 43 88999999999999999999 998 6888999999995431 000
Q ss_pred ----------------HHHHHH------HHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCcc-----------
Q 014151 224 ----------------DTLQDW------IDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPE----------- 267 (430)
Q Consensus 224 ----------------~~~~~w------~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~----------- 267 (430)
+.++.- ..++...+|+. +++..|.+-....+. .|.. .+|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~~g~IGi~~~~~~~--~P~~--~~~~D~~aa~~~~~~ 284 (497)
T PLN02998 209 CSPPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYKYKQHGSVGISVYTYGA--VPLT--NSVKDKQATARVNDF 284 (497)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEEeCCee--ecCC--CCHHHHHHHHHHHHH
Confidence 011211 22444566765 565555443221111 1100 0111
Q ss_pred --chhh---ccCcchh------------------hccCCCCcceEEeeecCCCCCCCc--c--h--h-------------
Q 014151 268 --MWAS---ALGSDFI------------------RNSNNDNIDFASVHIYPDHWFHDL--E--F--E------------- 305 (430)
Q Consensus 268 --~w~~---~~g~df~------------------~~~~~~~iD~~s~H~Y~~~w~~~~--~--~--~------------- 305 (430)
.|.. ..| ++. ..+-...+||+++++|........ . . .
T Consensus 285 ~~~~f~dp~~~G-~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (497)
T PLN02998 285 YIGWILHPLVFG-DYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMALYVKDNSSSLKPNLQDFNTDIAVEMTLV 363 (497)
T ss_pred HhhhhhhHHhCC-CcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEchhcCcccccCCCcCCCCccccccccccccccC
Confidence 1100 011 000 000123579999999965322100 0 0 0
Q ss_pred --hh----HHHHHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCC-CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeee
Q 014151 306 --DD----LKFVTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIK-GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQ 377 (430)
Q Consensus 306 --~~----~~~~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~ 377 (430)
.. .+....-|+..+....+.+++ ||+|+|.|+..... ...+..|..|++++++.+.+++.+|..+.|++.|+
T Consensus 364 ~~~~~~~~w~i~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WS 443 (497)
T PLN02998 364 GNTSIENEYANTPWSLQQILLYVKETYGNPPVYILENGQMTPHSSSLVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWS 443 (497)
T ss_pred CCcCCCCCCEEChHHHHHHHHHHHHHcCCCCEEEeCCCCccCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 00 000112234444444334777 69999999976421 23578999999999999999999999999999999
Q ss_pred eccCCCccCCCCce----EEcCCC--ccHHHHHHHHHHHHhhccccc
Q 014151 378 LFVEGMEEYNDDFG----IVPWER--TSTYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 378 ~~~~~~~~~~dg~~----i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 418 (430)
+.|+ .+|..||+ +++.|- ++..++.|+++..++.+-...
T Consensus 444 l~Dn--fEW~~Gy~~RfGLv~VD~~~~~~~R~pK~S~~wy~~ii~~~ 488 (497)
T PLN02998 444 LMDV--FELFGGYERSFGLLYVDFKDPSLKRSPKLSAHWYSSFLKGT 488 (497)
T ss_pred chhh--hchhccccCccceEEECCCCCCcceecccHHHHHHHHHhcc
Confidence 9998 78877765 444331 223588888888888775443
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-20 Score=189.15 Aligned_cols=307 Identities=13% Similarity=0.128 Sum_probs=204.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. ++.+|+++++.++++|+.+.++||.+++||++ |+
T Consensus 65 ~Yhry~eDi~Lm~~lG~~~yRf---SI-sWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H-~d------- 132 (476)
T PRK09589 65 FYHRYKEDIALFAEMGFKCFRT---SI-AWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSH-FE------- 132 (476)
T ss_pred HHHhhHHHHHHHHHcCCCEEEe---cc-chhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC-------
Confidence 4678999999999999999998 33 59999986 45689999999999999999999999999986 64
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----------C
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS-----------D 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~-----------~ 220 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |+| .|--|.++|||.+.. .
T Consensus 133 lP~~L~~~yGG---------W~n~~~i~~F~~YA~~~f~~--------fgd--rVk~WiT~NEp~~~~~~~~~~~~~~~~ 193 (476)
T PRK09589 133 MPYHLVTEYGG---------WRNRKLIDFFVRFAEVVFTR--------YKD--KVKYWMTFNEINNQANFSEDFAPFTNS 193 (476)
T ss_pred CCHHHHHhcCC---------cCChHHHHHHHHHHHHHHHH--------hcC--CCCEEEEecchhhhhccccccCCcccc
Confidence 25676543 43 88999999999999999999 998 588899999998431 0
Q ss_pred ----CC---h-H-HHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc------------chhh--
Q 014151 221 ----PS---G-D-TLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE------------MWAS-- 271 (430)
Q Consensus 221 ----~~---~-~-~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~------------~w~~-- 271 (430)
+. . . .++.- ..++.+++|+..|+..|.+-...... .|.. .+|. .|..
T Consensus 194 g~~~~pg~~~~~~~~~~~h~~llAha~A~~~~~~~~~~~~iG~~~~~~~~--~P~~--~~~~d~~aa~~~~~~~~~f~d~ 269 (476)
T PRK09589 194 GILYSPGEDREQIMYQAAHYELVASALAVKTGHEINPDFQIGCMIAMCPI--YPLT--CAPNDMMMATKAMHRRYWFTDV 269 (476)
T ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeCCee--eeCC--CCHHHHHHHHHHHHhccceecc
Confidence 00 0 0 11111 23455677888887555432211110 1100 0110 0100
Q ss_pred -ccC--------------c--chh----hccCCCCcceEEeeecCCCCCCC---cc---h---------h--hhH----H
Q 014151 272 -ALG--------------S--DFI----RNSNNDNIDFASVHIYPDHWFHD---LE---F---------E--DDL----K 309 (430)
Q Consensus 272 -~~g--------------~--df~----~~~~~~~iD~~s~H~Y~~~w~~~---~~---~---------~--~~~----~ 309 (430)
..| . .|. ..+....+||+++++|....... .. . + ... +
T Consensus 270 ~~~G~YP~~~~~~~~~~~~~~~~t~~d~~~l~~g~~DFlGiNyYts~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~ 349 (476)
T PRK09589 270 HVRGYYPQHILNYFARKGFNLDITPEDNAILAEGCVDYIGFSYYMSFATKFHEDNPQLDYVETRDLVSNPYVKASEWGWQ 349 (476)
T ss_pred eeCCCCcHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCCCcccccccccCCCcccCCCCCc
Confidence 001 0 010 00113457999999997643210 00 0 0 000 0
Q ss_pred HHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHH-hcCCCcccceeeeeccCCC
Q 014151 310 FVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 310 ~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W~~~~~~~ 383 (430)
....-|+..+....+.+++||+|+|.|+..... ...+..|..|+++++..+.+++ .+|..+.|++.|++.|+
T Consensus 350 i~P~Gl~~~L~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~V~GY~~WSl~Dn-- 427 (476)
T PRK09589 350 IDPAGLRYSLNWFWDHYQLPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIREMKKAVVEDGVDLMGYTPWGCIDL-- 427 (476)
T ss_pred cCcHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecccccc--
Confidence 111224444444444488999999999985321 1346799999999999999998 78999999999999998
Q ss_pred ccCCCC-ce----EEcCCCc-----cHHHHHHHHHHHHhhccccc
Q 014151 384 EEYNDD-FG----IVPWERT-----STYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 384 ~~~~dg-~~----i~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 418 (430)
.+|.+| |+ +++.|-. +..++.|+++..++.+-..|
T Consensus 428 ~Ew~~G~y~~RfGlv~VD~~~~~~~t~~R~pK~S~~wy~~~i~~n 472 (476)
T PRK09589 428 VSAGTGEMKKRYGFIYVDKDNEGKGTLERSRKKSFYWYRDVIANN 472 (476)
T ss_pred ccccCCccccceeeEEEcCCCCCCcccccccccHHHHHHHHHHhc
Confidence 789887 54 4444311 23588899998888775443
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=205.33 Aligned_cols=236 Identities=19% Similarity=0.238 Sum_probs=160.0
Q ss_pred CCCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 37 PEMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 37 ~~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
.+.|| |+++++.|++||+|++++|+|.|..........+.+.++++|+.||++|+|+||++. ++. .
T Consensus 313 ~~~GfR~iei~~~~f~lNGkpi~lrGvnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~sH-----yP~---~---- 380 (1021)
T PRK10340 313 QRVGFRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAH-----YPN---D---- 380 (1021)
T ss_pred eeeEEEEEEEECCEEEECCEEEEEEEeecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEecC-----CCC---C----
Confidence 46688 566789999999999999999874432222235789999999999999999999943 221 1
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
.+++++|+++||+|+-...- +. . |. .. . .....+..+|...+.+.+.++.++.|
T Consensus 381 --------~~fydlcDe~GllV~dE~~~-e~-~-g~------~~-~-----~~~~~~~~~p~~~~~~~~~~~~mV~R--- 434 (1021)
T PRK10340 381 --------PRFYELCDIYGLFVMAETDV-ES-H-GF------AN-V-----GDISRITDDPQWEKVYVDRIVRHIHA--- 434 (1021)
T ss_pred --------HHHHHHHHHCCCEEEECCcc-cc-c-Cc------cc-c-----cccccccCCHHHHHHHHHHHHHHHHh---
Confidence 15689999999999775421 10 0 10 00 0 00011245688888999999999999
Q ss_pred cccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG 274 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g 274 (430)
++|||+|++|.++||.... .. +++|.+.+|++||.|+|+.....
T Consensus 435 -----drNHPSIi~WslGNE~~~g-----~~----~~~~~~~~k~~DptR~v~~~~~~---------------------- 478 (1021)
T PRK10340 435 -----QKNHPSIIIWSLGNESGYG-----CN----IRAMYHAAKALDDTRLVHYEEDR---------------------- 478 (1021)
T ss_pred -----CCCCCEEEEEECccCcccc-----HH----HHHHHHHHHHhCCCceEEeCCCc----------------------
Confidence 9999999999999998652 22 36889999999999999874210
Q ss_pred cchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHH
Q 014151 275 SDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYK 354 (430)
Q Consensus 275 ~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~ 354 (430)
.....|+++. +|+.. + .+..+ .....+||++++||+....++ .....+|.
T Consensus 479 -------~~~~~Dv~~~-~Y~~~-----------~----~~~~~---~~~~~~kP~i~~Ey~hamgn~---~g~~~~yw- 528 (1021)
T PRK10340 479 -------DAEVVDVIST-MYTRV-----------E----LMNEF---GEYPHPKPRILCEYAHAMGNG---PGGLTEYQ- 528 (1021)
T ss_pred -------Cccccceecc-ccCCH-----------H----HHHHH---HhCCCCCcEEEEchHhccCCC---CCCHHHHH-
Confidence 1135788886 35521 0 11111 111147999999999765432 11223333
Q ss_pred HHHHHHHHHHhcCCCcccceeeeeccCCC
Q 014151 355 TILDIVYKSAKRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 355 ~~~~~~~~~~~~~~~~~G~~~W~~~~~~~ 383 (430)
+.+.+ .+...|.++|.|.|++.
T Consensus 529 ---~~~~~----~p~l~GgfiW~~~D~~~ 550 (1021)
T PRK10340 529 ---NVFYK----HDCIQGHYVWEWCDHGI 550 (1021)
T ss_pred ---HHHHh----CCceeEEeeeecCcccc
Confidence 22322 45799999999999753
|
|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=188.26 Aligned_cols=308 Identities=15% Similarity=0.231 Sum_probs=203.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.||++|+|+.|+ +. +|++++|. +|.+|+++++.++++|+.+.++||++++||++ |+ .
T Consensus 75 ~Yhry~EDI~L~k~lG~~ayRf---SI-sWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H-~d-------l 142 (504)
T PLN02814 75 GYHKYKEDVKLMAEMGLESFRF---SI-SWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYH-YD-------L 142 (504)
T ss_pred HHHhhHHHHHHHHHcCCCEEEE---ec-cHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecC-CC-------C
Confidence 4688999999999999999998 33 59999985 57899999999999999999999999999986 64 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC--------C---
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD--------P--- 221 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~--------~--- 221 (430)
|.|.... |+ |.+++..+.|.+|.+.+++| |+| .|--|.+.|||.+... +
T Consensus 143 P~~L~~~yGG---------W~n~~~i~~F~~YA~~~f~~--------fgd--rVk~WiT~NEP~~~~~~gy~~G~~pg~~ 203 (504)
T PLN02814 143 PQSLEDEYGG---------WINRKIIEDFTAFADVCFRE--------FGE--DVKLWTTINEATIFAIGSYGQGIRYGHC 203 (504)
T ss_pred CHHHHHhcCC---------cCChhHHHHHHHHHHHHHHH--------hCC--cCCEEEeccccchhhhcccccCcCCCCC
Confidence 6677653 43 88999999999999999999 998 5888999999985421 0
Q ss_pred C-------------hHHHHHH------HHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCcc------------
Q 014151 222 S-------------GDTLQDW------IDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPE------------ 267 (430)
Q Consensus 222 ~-------------~~~~~~w------~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~------------ 267 (430)
. .+.++.- ..+...++|+. .|+-.|.+-....+. .|.. .+|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~a~hn~llAHa~Av~~~~~~~~~~~~g~IGi~~~~~~~--~P~~--~~~~D~~Aa~~~~~~~ 279 (504)
T PLN02814 204 SPNKFINCSTGNSCTETYIAGHNMLLAHASASNLYKLKYKSKQRGSIGLSIFAFGL--SPYT--NSKDDEIATQRAKAFL 279 (504)
T ss_pred CcccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCcee--ecCC--CCHHHHHHHHHHHHHh
Confidence 0 0111211 23455567764 666455433221111 1100 0111
Q ss_pred -chhh---ccCcchh------------------hccCCCCcceEEeeecCCCCCCC---c--------ch--h-------
Q 014151 268 -MWAS---ALGSDFI------------------RNSNNDNIDFASVHIYPDHWFHD---L--------EF--E------- 305 (430)
Q Consensus 268 -~w~~---~~g~df~------------------~~~~~~~iD~~s~H~Y~~~w~~~---~--------~~--~------- 305 (430)
.|.. ..| ++. .......+||+++++|....... . .. .
T Consensus 280 ~~~f~dp~~~G-~YP~~~~~~l~~~lp~~~~~d~~~ikg~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (504)
T PLN02814 280 YGWMLKPLVFG-DYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVGIIHYTTFYVTNRPAPSIFPSMNEGFFTDMGAYIIS 358 (504)
T ss_pred hhhhhHHHhCC-CccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEcccccceeccCCCCCcccccCCCcccccccccCC
Confidence 1100 001 010 00012457999999996532110 0 00 0
Q ss_pred --hh--HHH--HHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCC-CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeee
Q 014151 306 --DD--LKF--VTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIK-GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQ 377 (430)
Q Consensus 306 --~~--~~~--~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~ 377 (430)
.. ..| ...-|+..+....+.+++ ||+|+|.|+..... ...+..|..|++++++.+.+++.+|..+.|++.|+
T Consensus 359 ~~~~~~~gWei~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WS 438 (504)
T PLN02814 359 AGNSSFFEFDATPWGLEGILEHIKQSYNNPPIYILENGMPMKHDSTLQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWS 438 (504)
T ss_pred CCCcCCCCCeECcHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 00 000 112234444444333666 79999999975432 24578999999999999999999999999999999
Q ss_pred eccCCCccCCCCce----EEcCCCc--cHHHHHHHHHHHHhhccccccc
Q 014151 378 LFVEGMEEYNDDFG----IVPWERT--STYKLLTEQSCGLGRISRLNLE 420 (430)
Q Consensus 378 ~~~~~~~~~~dg~~----i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 420 (430)
+.|+ .+|.+||+ +++.|-. +..++.|+++..++.+-..+..
T Consensus 439 llDn--fEW~~Gy~~RfGLvyVD~~~~~~~R~pK~S~~wy~~~i~~~~~ 485 (504)
T PLN02814 439 MIDL--YELLGGYTTSFGMYYVNFSDPGRKRSPKLSASWYTGFLNGTID 485 (504)
T ss_pred chhh--hchhccccCccceEEECCCCCCcceeeecHHHHHHHHHhcCCC
Confidence 9998 78877765 4443312 2358888888888877554433
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-20 Score=188.49 Aligned_cols=307 Identities=13% Similarity=0.138 Sum_probs=203.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .+.+|+++++.++++|+++.++||.++++|++ |+
T Consensus 67 ~Yhry~EDI~Lm~elG~~~yRf---SI-sWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H-~d------- 134 (477)
T PRK15014 67 FYGHYKEDIKLFAEMGFKCFRT---SI-AWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSH-FE------- 134 (477)
T ss_pred cccccHHHHHHHHHcCCCEEEe---cc-cceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeC-CC-------
Confidence 3568999999999999999998 32 59999886 45689999999999999999999999999986 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC-----C-------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM-----S------- 219 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~-----~------- 219 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.++|||... .
T Consensus 135 lP~~L~~~yGG---------W~n~~~~~~F~~Ya~~~f~~--------fgd--rVk~WiT~NEp~~~~~~~~~~~gy~~~ 195 (477)
T PRK15014 135 MPLHLVQQYGS---------WTNRKVVDFFVRFAEVVFER--------YKH--KVKYWMTFNEINNQRNWRAPLFGYCCS 195 (477)
T ss_pred CCHHHHHhcCC---------CCChHHHHHHHHHHHHHHHH--------hcC--cCCEEEEecCccccccccccccccccc
Confidence 25676543 43 88999999999999999999 998 48789999999742 1
Q ss_pred C---CCh--H---HHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-----------chhhc--
Q 014151 220 D---PSG--D---TLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-----------MWASA-- 272 (430)
Q Consensus 220 ~---~~~--~---~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-----------~w~~~-- 272 (430)
. +.. . .++.- ..++..++|+..|+..|.+-...... .|.. .+|. .|...
T Consensus 196 g~~~~~~~~~~~~~~~~~h~~llAHa~A~~~~~~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~Aa~~~~~~~~~f~d~ 271 (477)
T PRK15014 196 GVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPL--YPYS--CNPDDVMFAQESMRERYVFTDV 271 (477)
T ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcee--ccCC--CCHHHHHHHHHHHHhccccccc
Confidence 0 000 0 11111 23455678888887665543322111 1100 0110 01000
Q ss_pred --cC--------------c--chh----hccCCCCcceEEeeecCCCCCCC---------c------ch--hhh-H--HH
Q 014151 273 --LG--------------S--DFI----RNSNNDNIDFASVHIYPDHWFHD---------L------EF--EDD-L--KF 310 (430)
Q Consensus 273 --~g--------------~--df~----~~~~~~~iD~~s~H~Y~~~w~~~---------~------~~--~~~-~--~~ 310 (430)
.| . .+. ..+....+||+++++|....... . +. ... . +.
T Consensus 272 ~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~i~~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i 351 (477)
T PRK15014 272 QLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQI 351 (477)
T ss_pred ccCCCCCHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEcceeCeeeccCCCCCCCccccccccCCCCcccCCCCCcc
Confidence 00 0 000 00113467999999996432110 0 00 000 0 01
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHHh-cCCCcccceeeeeccCCCc
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSAK-RKRSGAGALIWQLFVEGME 384 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~G~~~W~~~~~~~~ 384 (430)
...-|+..+....+.+++||+|+|.|+.... ....+..|..|+++++..+.+++. +|..+.|++.|++.|+ .
T Consensus 352 ~P~Gl~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~~dGv~v~GY~~WSl~Dn--f 429 (477)
T PRK15014 352 DPVGLRYALCELYERYQKPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDC--V 429 (477)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhh--h
Confidence 1122444444444348899999999998532 113468899999999999999985 8999999999999998 7
Q ss_pred cCCCC-ce----EEcCC--Cc---cHHHHHHHHHHHHhhccccc
Q 014151 385 EYNDD-FG----IVPWE--RT---STYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 385 ~~~dg-~~----i~~~~--~~---~~~~~~~~~~~~~~~~~~~~ 418 (430)
+|..| |+ +++.| ++ +..++.|+++..++.+-..|
T Consensus 430 Ew~~G~y~~RfGl~~VD~~~~~~~~~~R~pK~S~~wy~~ii~~n 473 (477)
T PRK15014 430 SFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASN 473 (477)
T ss_pred cccCCCccCccceEEECCCCCCCcccceecccHHHHHHHHHHhc
Confidence 88877 54 55433 11 23588899998888775443
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.7e-20 Score=188.03 Aligned_cols=305 Identities=15% Similarity=0.204 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|+++++.++++|+.+.++||+++++|++ |+ .
T Consensus 51 ~yhry~eDi~L~~~lG~~~yRf---SI-sWsRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H-~d-------l 118 (467)
T TIGR01233 51 FYHKYPVDLELAEEYGVNGIRI---SI-AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FD-------T 118 (467)
T ss_pred hhhhHHHHHHHHHHcCCCEEEE---ec-chhhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccC-CC-------C
Confidence 4678999999999999999998 33 59999985 57899999999999999999999999999986 54 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------CC--
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------PS-- 222 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~~-- 222 (430)
|.|....|+ |.++++.+.|.+|.+.+++| |++ |--|.++|||..... +.
T Consensus 119 P~~L~~~GG---------W~n~~~v~~F~~YA~~~f~~--------fgd---Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~ 178 (467)
T TIGR01233 119 PEALHSNGD---------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIK 178 (467)
T ss_pred cHHHHHcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC---CCEEEEecchhhhhhccchhcccCCCcc
Confidence 667765553 88999999999999999999 983 778999999986421 10
Q ss_pred h---HHHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc--
Q 014151 223 G---DTLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS-- 275 (430)
Q Consensus 223 ~---~~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~-- 275 (430)
. ..++.- ..++..++|+.+|+..|.+-....+.. |.. ..+|. .|.. ..|.
T Consensus 179 ~~~~~~~~a~hn~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~--P~~-~~~~~D~~aA~~~~~~~~~~f~d~~~~G~Yp 255 (467)
T TIGR01233 179 YDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKY--PYD-PENPADVRAAELEDIIHNKFILDATYLGHYS 255 (467)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceeE--ECC-CCCHHHHHHHHHHHHHhhhcccchhhCCCCC
Confidence 0 111221 235566788888876665433221111 100 00110 1100 0010
Q ss_pred ------------------chh----hccC--CCCcceEEeeecCCCCCCC-----------c-----------ch-----
Q 014151 276 ------------------DFI----RNSN--NDNIDFASVHIYPDHWFHD-----------L-----------EF----- 304 (430)
Q Consensus 276 ------------------df~----~~~~--~~~iD~~s~H~Y~~~w~~~-----------~-----------~~----- 304 (430)
.+. ..+. ...+||+++++|....... . ..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~DFlGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (467)
T TIGR01233 256 DKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVA 335 (467)
T ss_pred HHHHHHHHhhhhccCCCCCCCHHHHHHHhccCCCCCEEEEccccceeeccCCCccccccCCccccCcccccCCCcccccC
Confidence 000 0011 2356999999996432110 0 00
Q ss_pred ----h-hhH--HHHHHHHHHHHHhhhhcCCC--cEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcc
Q 014151 305 ----E-DDL--KFVTKWMLSHIEDGDKELNK--PVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGA 371 (430)
Q Consensus 305 ----~-~~~--~~~~~~l~~~~~~a~~~~gk--Pv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 371 (430)
+ ... +....-|+..+....+.+++ ||+|+|.|+.... ....+..|..|+++++..+.+++.+|..+.
T Consensus 336 ~~~~~~t~~gw~i~P~Gl~~~L~~~~~~Y~~~ppi~ItENG~~~~d~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~ 415 (467)
T TIGR01233 336 PDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANVK 415 (467)
T ss_pred CCCCCcCCCCCeeChHHHHHHHHHHHHHcCCCCCEEEeCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 0 000 00122244444444444776 7999999998532 113468999999999999999999999999
Q ss_pred cceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhccc
Q 014151 372 GALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISR 416 (430)
Q Consensus 372 G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~ 416 (430)
|+++|++.|+ .+|..||+ +++-|-.+..+..|+++..++.+-.
T Consensus 416 GY~~WSl~Dn--~Ew~~Gy~~RfGLv~VD~~t~~R~~K~S~~wy~~ii~ 462 (467)
T TIGR01233 416 GYFIWSLMDV--FSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAE 462 (467)
T ss_pred EEeeccchhh--hchhccccCccceEEECCCCCccccccHHHHHHHHHH
Confidence 9999999998 78877765 5544423335778888887776643
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8e-20 Score=189.03 Aligned_cols=306 Identities=15% Similarity=0.210 Sum_probs=201.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .|.+|+++++.++++|+.+.++||..+++|++ |+ .
T Consensus 52 ~Y~ry~eDi~L~~~lG~~~yRf---SI-sWsRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H-~d-------l 119 (469)
T PRK13511 52 FYHRYPEDLKLAEEFGVNGIRI---SI-AWSRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHH-FD-------T 119 (469)
T ss_pred hhhhhHHHHHHHHHhCCCEEEe---ec-cHhhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC-------C
Confidence 4678999999999999999998 33 59999985 46799999999999999999999999999986 64 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------C--C
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------P--S 222 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~--~ 222 (430)
|.|....|+ |.++++.+.|.+|.+.+++| |+| |--|.++|||..... + .
T Consensus 120 P~~L~~~GG---------W~n~~~v~~F~~YA~~~~~~--------fgd---Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~ 179 (469)
T PRK13511 120 PEALHSNGD---------WLNRENIDHFVRYAEFCFEE--------FPE---VKYWTTFNEIGPIGDGQYLVGKFPPGIK 179 (469)
T ss_pred cHHHHHcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC---CCEEEEccchhhhhhcchhhcccCCCCC
Confidence 677765443 88999999999999999999 988 778999999985431 1 1
Q ss_pred h---HHHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc--
Q 014151 223 G---DTLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS-- 275 (430)
Q Consensus 223 ~---~~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~-- 275 (430)
. ..++.- ..+..+++|+..|+-.|.+-....+.. |.. ..+|. .|.. ..|.
T Consensus 180 ~~~~~~~~~~hn~llAHa~A~~~~~~~~~~g~IGi~~~~~~~~--P~~-~~~~~d~~aa~~~~~~~~~~f~dp~~~G~Yp 256 (469)
T PRK13511 180 YDLAKVFQSHHNMMVAHARAVKLFKDKGYKGEIGVVHALPTKY--PID-PDNPEDVRAAELEDIIHNKFILDATYLGYYS 256 (469)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceEe--eCC-CCCHHHHHHHHHHHHHhhhcccchhhCCCCC
Confidence 0 111211 234556788877765554432221111 100 00111 1100 0010
Q ss_pred ------------------chh----hccCC--CCcceEEeeecCCCCCCC---c--------------------------
Q 014151 276 ------------------DFI----RNSNN--DNIDFASVHIYPDHWFHD---L-------------------------- 302 (430)
Q Consensus 276 ------------------df~----~~~~~--~~iD~~s~H~Y~~~w~~~---~-------------------------- 302 (430)
.|. ..+.. ..+||+++++|....... .
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~t~~d~~~ik~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (469)
T PRK13511 257 EETMEGVNHILEANGGSLDIRDEDFEILKAAKDLNDFLGINYYMSDWMRAYDGETEIIHNGTGEKGSSKYQLKGVGERVK 336 (469)
T ss_pred HHHHHHHHHhhhhcCCCCCCCHHHHHHHhcCCCCCCEEEechhhcceeecCCCccccccCCCCccccccccccCcccccc
Confidence 010 00111 247999999996532110 0
Q ss_pred --chh-hhHH--HHHHHHHHHHHhhhhcCCC--cEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 303 --EFE-DDLK--FVTKWMLSHIEDGDKELNK--PVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 303 --~~~-~~~~--~~~~~l~~~~~~a~~~~gk--Pv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
..+ .... ....-|...+....+.+++ ||+|+|.|+..... ...+..|..|+++++..+.+++.+|..+
T Consensus 337 ~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~~~pi~ITENG~~~~d~~~~~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v 416 (469)
T PRK13511 337 PPDVPTTDWDWIIYPQGLYDQLMRIKKDYPNYKKIYITENGLGYKDEFVDGKTVDDDKRIDYVKQHLEVISDAISDGANV 416 (469)
T ss_pred CCCCCcCCCCCeECcHHHHHHHHHHHHHcCCCCCEEEecCCcCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 000 0000 0011133334434333665 79999999974321 1346789999999999999999999999
Q ss_pred ccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhcccc
Q 014151 371 AGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 371 ~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
.|+++|++.|+ .+|.+||+ +++.|-.+..+..|+++..++.+-..
T Consensus 417 ~GY~~WSl~Dn--fEW~~Gy~~RfGl~~VD~~~~~R~pK~S~~wy~~~i~~ 465 (469)
T PRK13511 417 KGYFIWSLMDV--FSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKKLAET 465 (469)
T ss_pred EEEeecccccc--cchhcCccCccceEEECCCcCccccccHHHHHHHHHHh
Confidence 99999999998 88987765 44444233357788888887766443
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=200.20 Aligned_cols=244 Identities=17% Similarity=0.163 Sum_probs=159.7
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||+|++++|+|.|..........+.+.++++|+.||++|+|+||+.. ++ +.
T Consensus 330 ~~GfR~iei~~~~f~LNGkpi~lrGvn~h~~~p~~G~a~t~e~~~~di~lmK~~g~NaVR~sH-----yP---~~----- 396 (1027)
T PRK09525 330 DVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSH-----YP---NH----- 396 (1027)
T ss_pred eEEEEEEEEECCEEEECCEEEEEEEeEccccCcccCccCCHHHHHHHHHHHHHCCCCEEEecC-----CC---CC-----
Confidence 5677 666789999999999999999874332222346889999999999999999999943 22 11
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
.+++++|+++||+|+-...- + .. |+. + ......+|+..+.+.+.++.++.|
T Consensus 397 -------p~fydlcDe~GilV~dE~~~-e-~h-g~~--~-------------~~~~~~dp~~~~~~~~~~~~mV~R---- 447 (1027)
T PRK09525 397 -------PLWYELCDRYGLYVVDEANI-E-TH-GMV--P-------------MNRLSDDPRWLPAMSERVTRMVQR---- 447 (1027)
T ss_pred -------HHHHHHHHHcCCEEEEecCc-c-cc-CCc--c-------------ccCCCCCHHHHHHHHHHHHHHHHh----
Confidence 25689999999999765421 1 00 110 0 011245788899999999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
+||||+|++|.++||+.... . ..+|...+|++||.|+|+..+.+.
T Consensus 448 ----drNHPSIi~WSlgNE~~~g~-----~----~~~l~~~~k~~DptRpV~y~~~~~---------------------- 492 (1027)
T PRK09525 448 ----DRNHPSIIIWSLGNESGHGA-----N----HDALYRWIKSNDPSRPVQYEGGGA---------------------- 492 (1027)
T ss_pred ----CCCCCEEEEEeCccCCCcCh-----h----HHHHHHHHHhhCCCCcEEECCCCC----------------------
Confidence 99999999999999986532 1 367888999999999998742110
Q ss_pred chhhccCCCCcceEEeeecCCC-CCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDH-WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYK 354 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~-w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~ 354 (430)
.....|+++.. |+.. +... ..... ...+.+..... ..+||++++|||....++ ... ++
T Consensus 493 ------~~~~~Dv~~~m-y~~~~~~~~--~~~~~---~~~~~~~~~~~--~~~kP~i~cEY~Hamgn~---~g~----l~ 551 (1027)
T PRK09525 493 ------DTAATDIICPM-YARVDEDQP--FPAVP---KWSIKKWISLP--GETRPLILCEYAHAMGNS---LGG----FA 551 (1027)
T ss_pred ------CCCccccccCC-CCCcccccc--ccccc---hHHHHHHHhcC--CCCCCEEEEechhcccCc---Ccc----HH
Confidence 01235665543 3321 1110 00000 00122221111 147999999999765542 112 23
Q ss_pred HHHHHHHHHHhcCCCcccceeeeeccCCC
Q 014151 355 TILDIVYKSAKRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 355 ~~~~~~~~~~~~~~~~~G~~~W~~~~~~~ 383 (430)
...+.+. +.+...|.++|.|.|++.
T Consensus 552 ~yw~~~~----~~~~~~GgfIW~w~Dqg~ 576 (1027)
T PRK09525 552 KYWQAFR----QYPRLQGGFIWDWVDQGL 576 (1027)
T ss_pred HHHHHHh----cCCCeeEEeeEeccCcce
Confidence 3333333 245799999999999865
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=187.20 Aligned_cols=303 Identities=16% Similarity=0.195 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.||++|+|+.|+ +. +|++++|.. |.+|+++++.++++|+++.++||..+++|++ |+ .
T Consensus 77 ~YhrY~eDI~Lm~~lG~~aYRf---SI-sWsRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H-~d-------l 144 (503)
T PLN02849 77 GYHKYKEDVKLMVETGLDAFRF---SI-SWSRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFH-YD-------H 144 (503)
T ss_pred HHHhHHHHHHHHHHcCCCeEEE---ec-cHHhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecC-CC-------C
Confidence 4679999999999999999998 33 599999853 6799999999999999999999999999986 64 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------C--
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------P-- 221 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~-- 221 (430)
|.|.... |+ |.+++..+.|.+|.+.+++| |+| .|--|.+.|||.+... +
T Consensus 145 P~~L~~~yGG---------W~nr~~v~~F~~YA~~~f~~--------fgD--rVk~WiT~NEP~~~~~~gy~~G~~~Pg~ 205 (503)
T PLN02849 145 PQYLEDDYGG---------WINRRIIKDFTAYADVCFRE--------FGN--HVKFWTTINEANIFTIGGYNDGITPPGR 205 (503)
T ss_pred cHHHHHhcCC---------cCCchHHHHHHHHHHHHHHH--------hcC--cCCEEEEecchhhhhhchhhhccCCCCc
Confidence 6677653 53 88999999999999999999 998 5888999999985321 0
Q ss_pred -Ch------------HHHHHH------HHHHHHHHHhc-C--CCCEEEEccCCccCCCCCCCcccCcc------------
Q 014151 222 -SG------------DTLQDW------IDEMSAFVKSI-D--KKHLVTVGLEGFYGPKSPKRLTVNPE------------ 267 (430)
Q Consensus 222 -~~------------~~~~~w------~~~~~~~Ir~~-d--p~~lV~~G~~g~~~~~~~~~~~~np~------------ 267 (430)
.. ..++.- ..++..++|+. . |+-.|.+-....+. .|.. .+|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~AA~~~~~~~ 281 (503)
T PLN02849 206 CSSPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKDMQGGSIGFSLFALGF--TPST--SSKDDDIATQRAKDFY 281 (503)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEEECcee--ecCC--CCHHHHHHHHHHHHHh
Confidence 00 011111 23455567765 2 55555443222111 1110 0111
Q ss_pred -chhh---ccCcchh------------------hccCCCCcceEEeeecCCCCCCC---cc----hhh-----------h
Q 014151 268 -MWAS---ALGSDFI------------------RNSNNDNIDFASVHIYPDHWFHD---LE----FED-----------D 307 (430)
Q Consensus 268 -~w~~---~~g~df~------------------~~~~~~~iD~~s~H~Y~~~w~~~---~~----~~~-----------~ 307 (430)
.|.. ..| ++. ...-...+||+++++|....... .. .+. .
T Consensus 282 ~~~f~dp~~~G-~YP~~~~~~l~~~lp~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (503)
T PLN02849 282 LGWMLEPLIFG-DYPDEMKRTIGSRLPVFSKEESEQVKGSSDFIGVIHYLAASVTNIKIKPSLSGNPDFYSDMGVSLGKF 360 (503)
T ss_pred hhhhhHHHhCC-CccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEeccchhhcccCCCCCCCCCCCccccccCCCCCcc
Confidence 0100 001 000 00012357999999996432110 00 000 0
Q ss_pred --H--HHHHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCC---CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 308 --L--KFVTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIK---GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 308 --~--~~~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~---~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
. +....-|+..+....+.+++ ||+|+|.|+..... ...+..|..|+++++..+.+++.+|..+.|++.|++.
T Consensus 361 ~~~gw~i~P~Gl~~~L~~~~~rY~~pPi~ITENG~~~~d~~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~ 440 (503)
T PLN02849 361 SAFEYAVAPWAMESVLEYIKQSYGNPPVYILENGTPMKQDLQLQQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFM 440 (503)
T ss_pred CCCCCeEChHHHHHHHHHHHHhcCCCCEEEeCCCCCccCCCCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccch
Confidence 0 00111234444433334777 79999999975321 1347899999999999999999999999999999999
Q ss_pred cCCCccCCCCce----EEcCCCc--cHHHHHHHHHHHHhhcc
Q 014151 380 VEGMEEYNDDFG----IVPWERT--STYKLLTEQSCGLGRIS 415 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~~~--~~~~~~~~~~~~~~~~~ 415 (430)
|+ .+|..||+ +++.|-. +..+..|+++..++.+-
T Consensus 441 Dn--fEW~~Gy~~RfGLi~VD~~~~~~~R~pK~S~~wy~~ii 480 (503)
T PLN02849 441 DL--YELLKGYEFSFGLYSVNFSDPHRKRSPKLSAHWYSAFL 480 (503)
T ss_pred hh--hchhccccCccceEEECCCCCCcceecccHHHHHHHHH
Confidence 98 78877765 4443312 23588888888888773
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-19 Score=183.62 Aligned_cols=306 Identities=16% Similarity=0.175 Sum_probs=202.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. ++.+|+++++.+|++|+++.++||.++++|++ |+
T Consensus 69 ~Yhry~eDi~l~~~lG~~~yR~---si-~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H-~~------- 136 (474)
T PRK09852 69 FYHRYKEDIALMAEMGFKVFRT---SI-AWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCH-FD------- 136 (474)
T ss_pred hhhhhHHHHHHHHHcCCCeEEe---ec-eeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeC-CC-------
Confidence 3678999999999999999998 32 58888886 45689999999999999999999999999986 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC-----------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----------- 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----------- 220 (430)
.|.|.... |+ |.++++.+.|.+|++.+++| |++ .|--|.++|||+....
T Consensus 137 ~P~~l~~~~GG---------W~~~~~~~~F~~ya~~~~~~--------fgd--~Vk~WiTfNEPn~~~~~gy~~~g~~~~ 197 (474)
T PRK09852 137 VPMHLVTEYGS---------WRNRKMVEFFSRYARTCFEA--------FDG--LVKYWLTFNEINIMLHSPFSGAGLVFE 197 (474)
T ss_pred CCHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHH--------hcC--cCCeEEeecchhhhhccCccccCcccC
Confidence 25666542 43 88999999999999999999 998 5778999999984310
Q ss_pred C--Ch-H-HHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc------------chhh---ccC-
Q 014151 221 P--SG-D-TLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE------------MWAS---ALG- 274 (430)
Q Consensus 221 ~--~~-~-~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~------------~w~~---~~g- 274 (430)
+ .. . .++.- ..++..++|+..|+-.|.+-....+. .|.. .+|. .|.. ..|
T Consensus 198 p~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~IGi~~~~~~~--~P~~--~~~~d~~AA~~~~~~~~~~~d~~~~G~ 273 (474)
T PRK09852 198 EGENQDQVKYQAAHHELVASALATKIAHEVNPQNQVGCMLAGGNF--YPYS--CKPEDVWAALEKDRENLFFIDVQARGA 273 (474)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCee--eeCC--CCHHHHHHHHHHHHHhhhhcchhhCCC
Confidence 1 00 0 11111 23455667888887555443322111 1100 0111 0100 001
Q ss_pred -------------c--chh---hccCCCCcceEEeeecCCCCCCCc---------ch------h---hh-H--HHHHHHH
Q 014151 275 -------------S--DFI---RNSNNDNIDFASVHIYPDHWFHDL---------EF------E---DD-L--KFVTKWM 315 (430)
Q Consensus 275 -------------~--df~---~~~~~~~iD~~s~H~Y~~~w~~~~---------~~------~---~~-~--~~~~~~l 315 (430)
. +|. ...-...+||+++++|........ .. + .. . +....-|
T Consensus 274 YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~gw~i~P~Gl 353 (474)
T PRK09852 274 YPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGL 353 (474)
T ss_pred ccHHHHHHHHhcCCCCCCCHHHHHHhcCCCCEEEEccccCeecccCCCCCCCCcCCceecccCCCcccCCCCCeeChHHH
Confidence 0 000 000124579999999965322100 00 0 00 0 0112224
Q ss_pred HHHHHhhhhcCCCcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCC-
Q 014151 316 LSHIEDGDKELNKPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDD- 389 (430)
Q Consensus 316 ~~~~~~a~~~~gkPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg- 389 (430)
+..+....+.+++||+|+|.|+..... ...+..|..|+++++.++.+++.+|..+.|++.|++.|+ .+|..|
T Consensus 354 ~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn--~Ew~~G~ 431 (474)
T PRK09852 354 RITMNMMYDRYQKPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDL--VSASTGE 431 (474)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEeeccccc--ccccCCC
Confidence 444444433488999999999985421 134778999999999999999999999999999999998 788777
Q ss_pred ----ceEEcCCCc-----cHHHHHHHHHHHHhhcccc
Q 014151 390 ----FGIVPWERT-----STYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 390 ----~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~ 417 (430)
|++++.|-. +..++.|+++..++.+-..
T Consensus 432 y~~RfGLv~VD~~~~~~~t~~R~pK~S~~wy~~ii~~ 468 (474)
T PRK09852 432 MSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIAS 468 (474)
T ss_pred ccceeeeEEECCCCCCCcccceecccHHHHHHHHHHh
Confidence 455554422 2358889998888877443
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=175.55 Aligned_cols=303 Identities=19% Similarity=0.267 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCC--CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG--QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg--~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
..+.++|++.|++||+|+.|+ +. +|+++.|.++ ..|+++++.+|++++.|.++||..+++|++ |+ +
T Consensus 58 YhrYkeDi~L~~emG~~~~R~---SI-~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~H-fd----~--- 125 (460)
T COG2723 58 YHRYKEDIALAKEMGLNAFRT---SI-EWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYH-FD----L--- 125 (460)
T ss_pred hhhhHHHHHHHHHcCCCEEEe---ee-eEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecc-cC----C---
Confidence 578999999999999999999 33 5988888654 599999999999999999999999999986 54 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-----------
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----------- 221 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----------- 221 (430)
|.|.... |+ |.|+++.+.|.+|.+.+++| |+| .|--|-++|||++....
T Consensus 126 P~~L~~~ygG---------W~nR~~i~~F~~ya~~vf~~--------f~d--kVk~W~TFNE~n~~~~~~y~~~~~~p~~ 186 (460)
T COG2723 126 PLWLQKPYGG---------WENRETVDAFARYAATVFER--------FGD--KVKYWFTFNEPNVVVELGYLYGGHPPGI 186 (460)
T ss_pred cHHHhhccCC---------ccCHHHHHHHHHHHHHHHHH--------hcC--cceEEEEecchhhhhcccccccccCCCc
Confidence 5565543 22 88999999999999999999 988 68899999999975321
Q ss_pred -C-hHHHHHH------HHHHHHHHHhcCCC-C-EEEEccCCccCCCCCCCcccCcc---------chhh-------ccCc
Q 014151 222 -S-GDTLQDW------IDEMSAFVKSIDKK-H-LVTVGLEGFYGPKSPKRLTVNPE---------MWAS-------ALGS 275 (430)
Q Consensus 222 -~-~~~~~~w------~~~~~~~Ir~~dp~-~-lV~~G~~g~~~~~~~~~~~~np~---------~w~~-------~~g~ 275 (430)
. ....+.. .....+.+|++.|+ . -++......| |.. -+|. .|.+ ..|.
T Consensus 187 ~~~~~~~qa~hh~~lA~A~avk~~~~~~~~~kIG~~~~~~p~Y----P~s--~~p~dv~aA~~~~~~~n~~FlD~~~~G~ 260 (460)
T COG2723 187 VDPKAAYQVAHHMLLAHALAVKAIKKINPKGKVGIILNLTPAY----PLS--DKPEDVKAAENADRFHNRFFLDAQVKGE 260 (460)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhCCcCceEEEeccCcCC----CCC--CCHHHHHHHHHHHHHhhhhhcchhhcCc
Confidence 1 1111222 12445667888887 3 2333221111 110 0121 0100 0010
Q ss_pred ---------------------chhhccCCCCcceEEeeecCC-CC-----------CCCcch--------hh-hH--HHH
Q 014151 276 ---------------------DFIRNSNNDNIDFASVHIYPD-HW-----------FHDLEF--------ED-DL--KFV 311 (430)
Q Consensus 276 ---------------------df~~~~~~~~iD~~s~H~Y~~-~w-----------~~~~~~--------~~-~~--~~~ 311 (430)
|. ..+....+||+++++|.+ .. .....+ +. .. +..
T Consensus 261 yp~~~~~~~~~~~~~~~~~~~Dl-~~lk~~~~DfiG~NYY~~s~v~~~~~~~~~~~~~~~~~~~~~~p~~~~sdwGWeI~ 339 (460)
T COG2723 261 YPEYLEKELEENGILPEIEDGDL-EILKENTVDFIGLNYYTPSRVKAAEPRYVSGYGPGGFFTSVPNPGLEVSDWGWEIY 339 (460)
T ss_pred CCHHHHHHHHhcCCCcccCcchH-HHHhcCCCCeEEEeeeeeeeEeeccCCcCCcccccccccccCCCCCcccCCCceeC
Confidence 00 112234589999999972 11 100000 00 00 001
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 312 TKWMLSHIEDGDKELNKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 312 ~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
..-|...+......+++|++|+|.|..... .+..+..|.+|+++++..+.+++..|..+.|++.|++.|. .+|.
T Consensus 340 P~GL~~~l~~~~~rY~~p~fItENG~G~~d~~~~~~i~DdyRI~Yl~~Hl~~v~~AI~dGv~v~GY~~Ws~iD~--~sw~ 417 (460)
T COG2723 340 PKGLYDILEKLYERYGIPLFITENGLGVKDEVDFDGINDDYRIDYLKEHLKAVKKAIEDGVDVRGYFAWSLIDN--YSWA 417 (460)
T ss_pred hHHHHHHHHHHHHHhCCCeEEecCCCCcccccccCCcCchHHHHHHHHHHHHHHHHHHcCCCcccceecccccc--cchh
Confidence 122333444444348899999999976543 1235689999999999999999999999999999999997 6787
Q ss_pred CCce----EEcCCCccH--HHHHHHHHHHHhhcccccc
Q 014151 388 DDFG----IVPWERTST--YKLLTEQSCGLGRISRLNL 419 (430)
Q Consensus 388 dg~~----i~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 419 (430)
.||. +++.| ..+ .+..+++...+..+..+|-
T Consensus 418 ~gy~kRYGli~VD-~~~~~~R~~KkS~~WyK~vi~sng 454 (460)
T COG2723 418 NGYKKRYGLVYVD-YDTDLERTPKKSFYWYKEVIESNG 454 (460)
T ss_pred hccccccccEEEc-ccccceeeecCceeeeHHHHhcCC
Confidence 7765 33332 333 4677777777776655553
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.6e-21 Score=197.63 Aligned_cols=303 Identities=16% Similarity=0.244 Sum_probs=193.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .|.+|+++++.++++|+.+.++||+++++|++ |+
T Consensus 56 ~y~~y~eDi~l~~~lg~~~yRf---si-~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H-~~------- 123 (455)
T PF00232_consen 56 HYHRYKEDIALMKELGVNAYRF---SI-SWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYH-FD------- 123 (455)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEE---E---HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEES-S--------
T ss_pred chhhhhHHHHHHHhhccceeee---ec-chhheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeee-cc-------
Confidence 3578999999999999999998 32 59999998 59999999999999999999999999999986 53
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---------C--
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------P-- 221 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------~-- 221 (430)
.|.|....|+ |.+++..+.|.+|.+.+++| |++ .|--|.++|||..... +
T Consensus 124 ~P~~l~~~gg---------w~~~~~~~~F~~Ya~~~~~~--------~gd--~V~~w~T~NEp~~~~~~~y~~g~~~p~~ 184 (455)
T PF00232_consen 124 LPLWLEDYGG---------WLNRETVDWFARYAEFVFER--------FGD--RVKYWITFNEPNVFALLGYLYGGFPPGR 184 (455)
T ss_dssp -BHHHHHHTG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TBSEEEEEETHHHHHHHHHTSSSSTTCS
T ss_pred cccceeeccc---------ccCHHHHHHHHHHHHHHHHH--------hCC--CcceEEeccccceeeccccccccccccc
Confidence 3677765554 88999999999999999999 998 5888999999985310 1
Q ss_pred -Ch-H------HHHHHHHHHHHHHHhcCCCCEEEEccCCccCCC-CCCCcccCcc-------------chhh---ccCc-
Q 014151 222 -SG-D------TLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK-SPKRLTVNPE-------------MWAS---ALGS- 275 (430)
Q Consensus 222 -~~-~------~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~-~~~~~~~np~-------------~w~~---~~g~- 275 (430)
+. . .+..-..++.+.+|+..|+..|.+-....+..+ ++. ++. .|.. ..|.
T Consensus 185 ~~~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~----~~d~~~Aa~~~~~~~n~~f~dpi~~G~Y 260 (455)
T PF00232_consen 185 DSLKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGIALNFSPFYPLSPS----PEDDVAAAERADEFHNGWFLDPIFKGDY 260 (455)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEEEEEEEEEEESSSS----HHHHHHHHHHHHHHHTHHHHHHHHHSSS
T ss_pred cccchhhHHHhhHHHHHHHHHHHHhhcccceEEeccccccccCCCCcc----chhhHHHHHHHHHHhhcccccCchhhcC
Confidence 11 1 112223466678899889888765432111100 000 000 0100 0110
Q ss_pred ---------------chh---hccCCCCcceEEeeecCCCCC---C--Ccch-----------------hhhHHH--HHH
Q 014151 276 ---------------DFI---RNSNNDNIDFASVHIYPDHWF---H--DLEF-----------------EDDLKF--VTK 313 (430)
Q Consensus 276 ---------------df~---~~~~~~~iD~~s~H~Y~~~w~---~--~~~~-----------------~~~~~~--~~~ 313 (430)
.|. ...-...+||+++++|..... + .... .....| ...
T Consensus 261 P~~~~~~~~~~~~lp~ft~ed~~~ikg~~DFlGiNYYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~ 340 (455)
T PF00232_consen 261 PEEMKEYLGERGILPEFTEEDKELIKGSIDFLGINYYTSRYVRADPNPSSPPSYDSDAPFGQPYNPGGPTTDWGWEIYPE 340 (455)
T ss_dssp EHHHHHHHGGGTSSTTSGHHHHHHHTTTTSEEEEEESEEEEEEESSSSTSSTTHEEEESEEEECETSSEBCTTSTBBETH
T ss_pred ChHHhhccccccccccccchhhhcccccchhhhhccccceeeccCccccccccccCCccccccccccccccccCcccccc
Confidence 000 001135799999999964211 0 0000 000000 012
Q ss_pred HHHHHHHhhhhcCC-CcEEEEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCC
Q 014151 314 WMLSHIEDGDKELN-KPVFFTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYND 388 (430)
Q Consensus 314 ~l~~~~~~a~~~~g-kPv~v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~d 388 (430)
-|+..++...+.++ +||+|+|.|+..... ...+..|..|+++.+..+.++..++..+.|+++|++.|+ .+|.+
T Consensus 341 Gl~~~L~~l~~~Y~~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn--~Ew~~ 418 (455)
T PF00232_consen 341 GLRDVLRYLKDRYGNPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSLLDN--FEWAE 418 (455)
T ss_dssp HHHHHHHHHHHHHTSSEEEEEEE---EETTCTTSHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETSB-----BGGG
T ss_pred hHhhhhhhhccccCCCcEEEecccccccccccccCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeeccccc--ccccc
Confidence 23334444332355 999999999987642 123689999999999999999999999999999999998 78877
Q ss_pred Cce----EEcCC-CccHHHHHHHHHHHHhhc
Q 014151 389 DFG----IVPWE-RTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 389 g~~----i~~~~-~~~~~~~~~~~~~~~~~~ 414 (430)
||+ +++.| .++..+..|.+++-++.+
T Consensus 419 Gy~~rfGl~~VD~~~~~~R~pK~S~~~y~~~ 449 (455)
T PF00232_consen 419 GYKKRFGLVYVDFFDTLKRTPKKSAYWYKDF 449 (455)
T ss_dssp GGGSE--SEEEETTTTTEEEEBHHHHHHHHH
T ss_pred CccCccCceEEcCCCCcCeeeccHHHHHHHH
Confidence 776 33333 343446677777766655
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=141.42 Aligned_cols=242 Identities=17% Similarity=0.234 Sum_probs=142.2
Q ss_pred HHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEecc--CCcccCCCcchhhh
Q 014151 79 VGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLV--NNLQAYGGKTQYVN 155 (430)
Q Consensus 79 ~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~--~~w~~~gg~~~y~~ 155 (430)
.++.|+.+|+.|+|.||+=++.+ |. .|..| ++..-++...|+++||+|+|+|| +.|.+.|.+..-..
T Consensus 26 ~~d~~~ilk~~G~N~vRlRvwv~-------P~~~g~~~---~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~a 95 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRVWVN-------PYDGGYND---LEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAA 95 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-SS--------TTTTTTS---HHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TT
T ss_pred CCCHHHHHHhcCCCeEEEEeccC-------CcccccCC---HHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCcc
Confidence 46789999999999999855433 22 24444 66777888889999999999998 34666554322222
Q ss_pred hhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC------CChHHHHH
Q 014151 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD------PSGDTLQD 228 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~------~~~~~~~~ 228 (430)
|.. .+-.+..++..+|.+.+++. +++.- .+-+++++||-+.... ...+.+.+
T Consensus 96 W~~-------------~~~~~l~~~v~~yT~~vl~~--------l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ 154 (332)
T PF07745_consen 96 WAN-------------LSFDQLAKAVYDYTKDVLQA--------LKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAK 154 (332)
T ss_dssp CTS-------------SSHHHHHHHHHHHHHHHHHH--------HHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHH
T ss_pred CCC-------------CCHHHHHHHHHHHHHHHHHH--------HHHCCCCccEEEeCccccccccCcCCCccCHHHHHH
Confidence 321 12367888889999999988 76643 4667899999764321 23467788
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhH
Q 014151 229 WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL 308 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~ 308 (430)
.++..+++||+.+|+..|.+..+.-... ....|... .... ..-..|++++++||. |... .
T Consensus 155 ll~ag~~AVr~~~p~~kV~lH~~~~~~~--------~~~~~~f~----~l~~-~g~d~DviGlSyYP~-w~~~--l---- 214 (332)
T PF07745_consen 155 LLNAGIKAVREVDPNIKVMLHLANGGDN--------DLYRWFFD----NLKA-AGVDFDVIGLSYYPF-WHGT--L---- 214 (332)
T ss_dssp HHHHHHHHHHTHSSTSEEEEEES-TTSH--------HHHHHHHH----HHHH-TTGG-SEEEEEE-ST-TST---H----
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCCCch--------HHHHHHHH----HHHh-cCCCcceEEEecCCC-Ccch--H----
Confidence 8999999999999999998865321000 00122211 0111 124578999999996 5431 1
Q ss_pred HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC----------------C--CCChhHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 309 KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI----------------K--GFEPSLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 309 ~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~----------------~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
+- +...+....+.++|||+|.|.|..... . ..+.+.+.++++.+++.+.+. . +..+
T Consensus 215 ~~----l~~~l~~l~~ry~K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~-p-~~~g 288 (332)
T PF07745_consen 215 ED----LKNNLNDLASRYGKPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNV-P-NGGG 288 (332)
T ss_dssp HH----HHHHHHHHHHHHT-EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS----TTE
T ss_pred HH----HHHHHHHHHHHhCCeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHh-c-cCCe
Confidence 11 222223322238999999999987651 0 124678889999888766432 1 2368
Q ss_pred ccceeee
Q 014151 371 AGALIWQ 377 (430)
Q Consensus 371 ~G~~~W~ 377 (430)
.|.++|.
T Consensus 289 ~GvfYWe 295 (332)
T PF07745_consen 289 LGVFYWE 295 (332)
T ss_dssp EEEEEE-
T ss_pred EEEEeec
Confidence 9999993
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.1e-15 Score=160.86 Aligned_cols=155 Identities=19% Similarity=0.230 Sum_probs=121.2
Q ss_pred CCCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 37 PEMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 37 ~~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
...|| |++..+.|.+||||++++|+|.|.....-.....++.++++|+.||++|+|+||++.+..
T Consensus 279 ~~iGfR~iei~~~~~~iNGkpvf~kGvnrHe~~~~~G~~~~~~~~~~dl~lmk~~n~N~vRtsHyP~------------- 345 (808)
T COG3250 279 LRIGFRTVEIKDGLLLINGKPVFIRGVNRHEDDPILGRVTDEDAMERDLKLMKEANMNSVRTSHYPN------------- 345 (808)
T ss_pred eeeccEEEEEECCeEEECCeEEEEeeeecccCCCccccccCHHHHHHHHHHHHHcCCCEEEecCCCC-------------
Confidence 35788 666688999999999999999876544333344677799999999999999999974321
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
+ ++.+++|+++||+||-.....|. | ...+++.++...+.++.+++|
T Consensus 346 ~-------~~~ydLcDelGllV~~Ea~~~~~---------------~---------~~~~~~~~k~~~~~i~~mver--- 391 (808)
T COG3250 346 S-------EEFYDLCDELGLLVIDEAMIETH---------------G---------MPDDPEWRKEVSEEVRRMVER--- 391 (808)
T ss_pred C-------HHHHHHHHHhCcEEEEecchhhc---------------C---------CCCCcchhHHHHHHHHHHHHh---
Confidence 1 26689999999999876543221 1 115788888999999999999
Q ss_pred cccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEG 252 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g 252 (430)
.|+||+|+.|.++||...... +..+...+|+.||.++|..+...
T Consensus 392 -----~knHPSIiiWs~gNE~~~g~~---------~~~~~~~~k~~d~~r~~~~~~~~ 435 (808)
T COG3250 392 -----DRNHPSIIIWSLGNESGHGSN---------HWALYRWFKASDPTRPVQYEGRG 435 (808)
T ss_pred -----ccCCCcEEEEeccccccCccc---------cHHHHHHHhhcCCccceeccCcc
Confidence 999999999999999886432 24566678999999999987654
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=139.37 Aligned_cols=168 Identities=19% Similarity=0.273 Sum_probs=114.5
Q ss_pred eEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHH
Q 014151 48 HFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIV 127 (430)
Q Consensus 48 ~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~ 127 (430)
+|++||||+++.+--.|+.... ++.|++.|+.||++|+|+|-++++ |+-+++.||+||-+....|+++|+
T Consensus 1 ~~~~~g~~~~~~~Ge~hy~r~p------~~~W~~~l~k~ka~G~n~v~~yv~----W~~he~~~g~~df~g~~dl~~f~~ 70 (319)
T PF01301_consen 1 SFLIDGKPFFILSGEFHYFRIP------PEYWRDRLQKMKAAGLNTVSTYVP----WNLHEPEEGQFDFTGNRDLDRFLD 70 (319)
T ss_dssp CEEETTEEE-EEEEEE-GGGS-------GGGHHHHHHHHHHTT-SEEEEE------HHHHSSBTTB---SGGG-HHHHHH
T ss_pred CeEECCEEEEEEEeeeccccCC------hhHHHHHHHHHHhCCcceEEEecc----ccccCCCCCcccccchhhHHHHHH
Confidence 4889999999998887765533 688999999999999999999886 677899999999888899999999
Q ss_pred HHHHcCCEEEEec----cCCcccCCCcchhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC
Q 014151 128 EARKNGVRLLLSL----VNNLQAYGGKTQYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202 (430)
Q Consensus 128 ~A~~~Gi~vil~l----~~~w~~~gg~~~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~ 202 (430)
.|+++||+||+-. +..| ++||. |.|.... +..+ =-+|+...+..+++++.++..+ ....+++
T Consensus 71 ~a~~~gl~vilrpGpyi~aE~-~~gG~---P~Wl~~~~~~~~------R~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 137 (319)
T PF01301_consen 71 LAQENGLYVILRPGPYICAEW-DNGGL---PAWLLRKPDIRL------RTNDPPFLEAVERWYRALAKII---KPLQYTN 137 (319)
T ss_dssp HHHHTT-EEEEEEES---TTB-GGGG-----GGGGGSTTS-S------SSS-HHHHHHHHHHHHHHHHHH---GGGBGGG
T ss_pred HHHHcCcEEEecccceecccc-cchhh---hhhhhccccccc------cccchhHHHHHHHHHHHHHHHH---HhhhhcC
Confidence 9999999999943 3345 35665 5776542 1111 1346888888888888877763 2355666
Q ss_pred CCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 014151 203 DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKK 243 (430)
Q Consensus 203 ~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~ 243 (430)
.-.|++.++.||..... .-+++++.+.+..++.-++
T Consensus 138 GGpII~vQvENEyg~~~-----~~~~Y~~~l~~~~~~~g~~ 173 (319)
T PF01301_consen 138 GGPIIMVQVENEYGSYG-----TDRAYMEALKDAYRDWGID 173 (319)
T ss_dssp TSSEEEEEESSSGGCTS-----S-HHHHHHHHHHHHHTT-S
T ss_pred CCceehhhhhhhhCCCc-----ccHhHHHHHHHHHHHhhCc
Confidence 67899999999988432 2345566666666665554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.4e-14 Score=148.76 Aligned_cols=183 Identities=15% Similarity=0.210 Sum_probs=137.4
Q ss_pred cEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHH
Q 014151 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120 (430)
Q Consensus 41 fv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~ 120 (430)
-|+.++..|++||||+++.+-..|+... .++.|++.|+.||++|+|+|-++++ |+.+||.||+||-+...
T Consensus 29 ~v~~d~~~f~idG~p~~i~sG~iHY~R~------~p~~W~d~L~k~Ka~GlNtV~tYV~----Wn~HEp~~G~~dF~G~~ 98 (840)
T PLN03059 29 SVSYDHRAFIINGQRRILISGSIHYPRS------TPEMWPDLIQKAKDGGLDVIQTYVF----WNGHEPSPGNYYFEDRY 98 (840)
T ss_pred EEEEeCCEEEECCEEEEEEEeCcccCcC------CHHHHHHHHHHHHHcCCCeEEEEec----ccccCCCCCeeeccchH
Confidence 4889999999999999999888887653 3799999999999999999999998 77789999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEe----ccCCcccCCCcchhhhhhhh-hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 121 ALDHVIVEARKNGVRLLLS----LVNNLQAYGGKTQYVNWAWE-EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~----l~~~w~~~gg~~~y~~W~~~-~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
.|.++|++|++.||+||+- .+..| ++||. |.|... .|..+ + -+||...++.++|+++|+.++- -
T Consensus 99 DL~~Fl~la~e~GLyvilRpGPYIcAEw-~~GGl---P~WL~~~~~i~~----R--s~d~~fl~~v~~~~~~l~~~l~-~ 167 (840)
T PLN03059 99 DLVKFIKVVQAAGLYVHLRIGPYICAEW-NFGGF---PVWLKYVPGIEF----R--TDNGPFKAAMQKFTEKIVDMMK-S 167 (840)
T ss_pred HHHHHHHHHHHcCCEEEecCCcceeeee-cCCCC---chhhhcCCCccc----c--cCCHHHHHHHHHHHHHHHHHHh-h
Confidence 9999999999999999994 34457 47887 577642 12111 0 2478899999999998888720 0
Q ss_pred ccccccCCCceeEEeecCCCCCCCC---CChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSD---PSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~---~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
.+..+++--.|++.++.||-..... .......+|+++| .++.+-+.+..
T Consensus 168 ~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~---~~~~Gi~VPl~ 219 (840)
T PLN03059 168 EKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADM---AVKLGTGVPWV 219 (840)
T ss_pred cceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHH---HHHcCCCcceE
Confidence 2334566668999999999875421 1223455555555 45555554443
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-12 Score=133.37 Aligned_cols=321 Identities=16% Similarity=0.205 Sum_probs=195.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-C--CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-P--GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-p--g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++.+|++.|+++|+++.|+ +. +|+++.|. . +..++++++.+..+|++..++||.++++|++ |+.
T Consensus 89 ~Yh~ykeDv~Lmk~lgv~afRF---SI-sWSRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfH-wDl----- 158 (524)
T KOG0626|consen 89 FYHRYKEDVKLMKELGVDAFRF---SI-SWSRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFH-WDL----- 158 (524)
T ss_pred hhhhhHHHHHHHHHcCCCeEEE---Ee-ehHhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEec-CCC-----
Confidence 3568999999999999999998 33 58888764 2 4589999999999999999999999999985 752
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---------- 220 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---------- 220 (430)
|++..+. |+ |-+++.++.|++|.+-+.++ |+| .|-.|.++|||.....
T Consensus 159 --Pq~LeDeYgG---------wLn~~ivedF~~yA~~CF~~--------fGD--rVK~WiT~NEP~v~s~~gY~~G~~aP 217 (524)
T KOG0626|consen 159 --PQALEDEYGG---------WLNPEIVEDFRDYADLCFQE--------FGD--RVKHWITFNEPNVFSIGGYDTGTKAP 217 (524)
T ss_pred --CHHHHHHhcc---------ccCHHHHHHHHHHHHHHHHH--------hcc--cceeeEEecccceeeeehhccCCCCC
Confidence 4555432 22 77899999999999999999 999 5999999999994321
Q ss_pred --C-----------C-hH------HHHHHHHHHHHHHHhc-CC--CCEEEEccCCccCCCCCCCcc-cC--------ccc
Q 014151 221 --P-----------S-GD------TLQDWIDEMSAFVKSI-DK--KHLVTVGLEGFYGPKSPKRLT-VN--------PEM 268 (430)
Q Consensus 221 --~-----------~-~~------~~~~w~~~~~~~Ir~~-dp--~~lV~~G~~g~~~~~~~~~~~-~n--------p~~ 268 (430)
+ + .+ .+.--+.+.....|+. .+ +=.|.+.....|-.+...... .. .-+
T Consensus 218 GrCs~~~~~c~~g~s~~epYiv~HNllLAHA~Av~~yr~kyk~~Q~G~IGi~~~~~w~eP~~~s~~D~~Aa~Ra~~F~~g 297 (524)
T KOG0626|consen 218 GRCSKYVGNCSAGNSGTEPYIVAHNLLLAHAAAVDLYRKKYKKKQGGKIGIALSARWFEPYDDSKEDKEAAERALDFFLG 297 (524)
T ss_pred CCCCcccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhcCCeEeEEEeeeeeccCCCChHHHHHHHHHHHhhhh
Confidence 0 0 01 1111122333333432 21 123333222222111100000 00 002
Q ss_pred hhhc--cCcchhh------------------ccCCCCcceEEeeecCCCCCCC----c-----------c--h--hh---
Q 014151 269 WASA--LGSDFIR------------------NSNNDNIDFASVHIYPDHWFHD----L-----------E--F--ED--- 306 (430)
Q Consensus 269 w~~~--~g~df~~------------------~~~~~~iD~~s~H~Y~~~w~~~----~-----------~--~--~~--- 306 (430)
|.-. ...|+.. .+-....||+++++|....... . . . ..
T Consensus 298 w~l~p~~~GdYP~~Mk~~vg~rLP~FT~ee~~~lKGS~DFvGiNyYts~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 377 (524)
T KOG0626|consen 298 WFLEPLTFGDYPDEMKERVGSRLPKFTEEESKLLKGSYDFVGINYYTSRYVKHLKPPPDPSQPGWSTDSGVDWTLEGNDL 377 (524)
T ss_pred hhhcccccCCcHHHHHHHhcccCCCCCHHHHHHhcCchhhceeehhhhhhhhccCCCCCCCCcccccccceeeeeccccc
Confidence 3211 0111210 0112456999999985321100 0 0 0 00
Q ss_pred --------hHHHHHHHHHHHHHhhhh-cCCCcEEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHHh-cCCC
Q 014151 307 --------DLKFVTKWMLSHIEDGDK-ELNKPVFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSAK-RKRS 369 (430)
Q Consensus 307 --------~~~~~~~~l~~~~~~a~~-~~gkPv~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~~-~~~~ 369 (430)
.+.....-++..+...+. ..+.|++|+|.|...... ...+..|..|++..+..+.++++ .+..
T Consensus 378 ~~~~~~~~~~~v~P~Glr~~L~yiK~~Y~np~iyItENG~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dgvn 457 (524)
T KOG0626|consen 378 IGPKAGSDWLPVYPWGLRKLLNYIKDKYGNPPIYITENGFDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDGVN 457 (524)
T ss_pred ccccccccceeeccHHHHHHHHHHHhhcCCCcEEEEeCCCCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 000001113333344433 357889999999988632 12468899999999999999887 6778
Q ss_pred cccceeeeeccCCCccCCCCce----EEcCC--CccHHHHHHHHHHHHhhccccc---cccchhHhhhc
Q 014151 370 GAGALIWQLFVEGMEEYNDDFG----IVPWE--RTSTYKLLTEQSCGLGRISRLN---LEKGNLKELCS 429 (430)
Q Consensus 370 ~~G~~~W~~~~~~~~~~~dg~~----i~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 429 (430)
+.|+++|++.|+ .+|.+||+ +++.| ++ ..+..+.+++-++..=..+ .+....++||+
T Consensus 458 v~GYf~WSLmDn--fEw~~Gy~~RFGlyyVDf~d~-l~R~pK~Sa~wy~~fl~~~~~~~~~~~~~~l~~ 523 (524)
T KOG0626|consen 458 VKGYFVWSLLDN--FEWLDGYKVRFGLYYVDFKDP-LKRYPKLSAKWYKKFLKGKVKPHESQGIKELHP 523 (524)
T ss_pred eeeEEEeEcccc--hhhhcCcccccccEEEeCCCC-CcCCchhHHHHHHHHHcCCCCCccccchhhcCC
Confidence 999999999998 88988876 33322 24 4466677777777552222 23444455554
|
|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.8e-13 Score=126.91 Aligned_cols=235 Identities=17% Similarity=0.293 Sum_probs=119.0
Q ss_pred CCCCCcEEEeCCeEE--ECCeEEEEEeeecccccccc-----CCC-CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcc
Q 014151 36 EPEMGFVTRNGTHFM--LDGKALYVNGWNSYWLMDHA-----VHD-YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL 107 (430)
Q Consensus 36 ~~~~gfv~~~g~~f~--~~G~~~~~~G~N~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~ 107 (430)
.++...|+++|.+|+ .+|++|+++|+.+ +..... .+| .+.+..++|+..|+++|+|+||++.... ..
T Consensus 5 ~~~~~pI~ikG~kff~~~~g~~F~ikGVaY-Qp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~vdp----~~ 79 (314)
T PF03198_consen 5 AAAVPPIEIKGNKFFYSKNGTRFFIKGVAY-QPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYSVDP----SK 79 (314)
T ss_dssp STTS--EEEETTEEEETTT--B--EEEEE-----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES---T----TS
T ss_pred hccCCCEEEECCEeEECCCCCEEEEeeEEc-ccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEEeCC----CC
Confidence 346678999999999 5999999999984 333221 133 3578999999999999999999976531 00
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCH--HHHHHHHHHH
Q 014151 108 QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDP--SIHKYFKHYV 185 (430)
Q Consensus 108 ~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~--~~~~~~~~~~ 185 (430)
.=|+.+.+..+.|||||++|... .+..+. .+| ..-..+.+..
T Consensus 80 -------------nHd~CM~~~~~aGIYvi~Dl~~p---~~sI~r--------------------~~P~~sw~~~l~~~~ 123 (314)
T PF03198_consen 80 -------------NHDECMSAFADAGIYVILDLNTP---NGSINR--------------------SDPAPSWNTDLLDRY 123 (314)
T ss_dssp ---------------HHHHHHHHHTT-EEEEES-BT---TBS--T--------------------TS------HHHHHHH
T ss_pred -------------CHHHHHHHHHhCCCEEEEecCCC---CccccC--------------------CCCcCCCCHHHHHHH
Confidence 12688999999999999999642 111110 112 2222334444
Q ss_pred HHHHhccCCcccccccCCCceeEEeecCCCCCCCC--CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcc
Q 014151 186 KTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD--PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLT 263 (430)
Q Consensus 186 ~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~ 263 (430)
..++.. ++..|+++++-.+||-..... ..++-+++.+++|.++|++... |.|-+|... .+..+ .
T Consensus 124 ~~vid~--------fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVGYsa---aD~~~-~- 189 (314)
T PF03198_consen 124 FAVIDA--------FAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVGYSA---ADDAE-I- 189 (314)
T ss_dssp HHHHHH--------HTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEEE------TT-T-
T ss_pred HHHHHH--------hccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceeEEc---cCChh-H-
Confidence 555666 888999999999999764322 1245567888999999998665 334444311 11110 0
Q ss_pred cCccchhh-ccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC
Q 014151 264 VNPEMWAS-ALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI 341 (430)
Q Consensus 264 ~np~~w~~-~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~ 341 (430)
.+.-+.| ..|. ....+||++++.|. |-...++.. .-........+. +..|++++|||.-...
T Consensus 190 -r~~~a~Yl~Cg~------~~~~iDf~g~N~Y~--WCg~Stf~~------SGy~~l~~~f~~-y~vPvffSEyGCn~~~ 252 (314)
T PF03198_consen 190 -RQDLANYLNCGD------DDERIDFFGLNSYE--WCGDSTFET------SGYDRLTKEFSN-YSVPVFFSEYGCNTVT 252 (314)
T ss_dssp -HHHHHHHTTBTT-----------S-EEEEE------SS--HHH------HSHHHHHHHHTT--SS-EEEEEE---SSS
T ss_pred -HHHHHHHhcCCC------cccccceeeeccce--ecCCCcccc------ccHHHHHHHhhC-CCCCeEEcccCCCCCC
Confidence 0111222 1121 22579999999998 765433321 111222333443 8999999999987654
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.8e-13 Score=128.56 Aligned_cols=167 Identities=22% Similarity=0.354 Sum_probs=99.7
Q ss_pred CCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCC-CC------C--ccc-cCC---
Q 014151 46 GTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDG-GY------N--SLQ-ISP--- 111 (430)
Q Consensus 46 g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g-~~------~--~~~-~~p--- 111 (430)
+..|+ .||+||++.|...|-+.... +.++++..|+..++.|+|+||+-++..- +. + ++. ..+
T Consensus 2 ~r~f~~~dG~Pff~lgdT~W~~~~~~----~~~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~ 77 (289)
T PF13204_consen 2 GRHFVYADGTPFFWLGDTAWSLFHRL----TREEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQF 77 (289)
T ss_dssp SSSEEETTS-B--EEEEE-TTHHHH------HHHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT----
T ss_pred CceEecCCCCEEeehhHHHHHHhhCC----CHHHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCcccc
Confidence 45677 49999999998755444332 4788999999999999999999766431 01 1 111 112
Q ss_pred --CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh--hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 014151 112 --GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY--VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKT 187 (430)
Q Consensus 112 --g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y--~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~ 187 (430)
..++++.|+++|++|+.|.++||.+.|.+. |... | ..|.. | . +.-..+..++|++.
T Consensus 78 d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~--wg~~-----~~~~~Wg~--~-------~----~~m~~e~~~~Y~~y 137 (289)
T PF13204_consen 78 DFTRPNPAYFDHLDRRIEKANELGIEAALVPF--WGCP-----YVPGTWGF--G-------P----NIMPPENAERYGRY 137 (289)
T ss_dssp --TT----HHHHHHHHHHHHHHTT-EEEEESS---HHH-----HH----------------T----TSS-HHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEE--ECCc-----cccccccc--c-------c----cCCCHHHHHHHHHH
Confidence 237899999999999999999999966543 4110 1 12421 0 0 11124556899999
Q ss_pred HHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 188 VLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 188 lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|++| |+..|+|+ |.|.||- ... ..-.+..++|++.||+.||.+|+|+-.
T Consensus 138 v~~R--------y~~~~Nvi-W~l~gd~-~~~----~~~~~~w~~~~~~i~~~dp~~L~T~H~ 186 (289)
T PF13204_consen 138 VVAR--------YGAYPNVI-WILGGDY-FDT----EKTRADWDAMARGIKENDPYQLITIHP 186 (289)
T ss_dssp HHHH--------HTT-SSEE-EEEESSS---T----TSSHHHHHHHHHHHHHH--SS-EEEEE
T ss_pred HHHH--------HhcCCCCE-EEecCcc-CCC----CcCHHHHHHHHHHHHhhCCCCcEEEeC
Confidence 9999 99999998 9999998 221 223344579999999999988988753
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-12 Score=123.56 Aligned_cols=220 Identities=18% Similarity=0.332 Sum_probs=142.0
Q ss_pred CCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHH
Q 014151 104 YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKH 183 (430)
Q Consensus 104 ~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~ 183 (430)
|..++|++|.|| ++..|++++.|+++||+|.--.. -|.. +.|.|.... ..++.++.+.+
T Consensus 3 W~~~ep~~G~~n---~~~~D~~~~~a~~~gi~v~gH~l-~W~~-----~~P~W~~~~------------~~~~~~~~~~~ 61 (254)
T smart00633 3 WDSTEPSRGQFN---FSGADAIVNFAKENGIKVRGHTL-VWHS-----QTPDWVFNL------------SKETLLARLEN 61 (254)
T ss_pred cccccCCCCccC---hHHHHHHHHHHHHCCCEEEEEEE-eecc-----cCCHhhhcC------------CHHHHHHHHHH
Confidence 677899999998 88899999999999999843111 1532 236776421 13567899999
Q ss_pred HHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC------ChHHH-HHHHHHHHHHHHhcCCCCEEEEccCCccCC
Q 014151 184 YVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP------SGDTL-QDWIDEMSAFVKSIDKKHLVTVGLEGFYGP 256 (430)
Q Consensus 184 ~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~------~~~~~-~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~ 256 (430)
|++.+++| |++. |..|++.|||...... ..+.+ ..|+....+++|+.||+..+.+.. |+.
T Consensus 62 ~i~~v~~r--------y~g~--i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Nd---y~~ 128 (254)
T smart00633 62 HIKTVVGR--------YKGK--IYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYND---YNT 128 (254)
T ss_pred HHHHHHHH--------hCCc--ceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEec---cCC
Confidence 99999999 9874 8889999999864310 00111 268888999999999998887752 121
Q ss_pred CCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEE
Q 014151 257 KSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFF 332 (430)
Q Consensus 257 ~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v 332 (430)
..+. ..... =..+...+ ..-.||-+++ |.+... + +. + .+.+.++...+ .|+||+|
T Consensus 129 ~~~~------~k~~~--~~~~v~~l~~~g~~iDgiGlQ~H~~~~~--~--~~----~----~~~~~l~~~~~-~g~pi~i 187 (254)
T smart00633 129 EEPN------AKRQA--IYELVKKLKAKGVPIDGIGLQSHLSLGS--P--NI----A----EIRAALDRFAS-LGLEIQI 187 (254)
T ss_pred cCcc------HHHHH--HHHHHHHHHHCCCccceeeeeeeecCCC--C--CH----H----HHHHHHHHHHH-cCCceEE
Confidence 1110 00000 00111111 1112676655 544321 1 11 1 23444444454 7999999
Q ss_pred EecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 333 TEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 333 ~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
+|+++.... +++.++++|+.++..+.+. +.+.|.++|.+.+. .+|.
T Consensus 188 TE~dv~~~~---~~~~qA~~~~~~l~~~~~~----p~v~gi~~Wg~~d~--~~W~ 233 (254)
T smart00633 188 TELDISGYP---NPQAQAADYEEVFKACLAH----PAVTGVTVWGVTDK--YSWL 233 (254)
T ss_pred EEeecCCCC---cHHHHHHHHHHHHHHHHcC----CCeeEEEEeCCccC--Cccc
Confidence 999998753 2367888888888877653 46899999999876 3563
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.9e-13 Score=106.54 Aligned_cols=75 Identities=32% Similarity=0.663 Sum_probs=47.6
Q ss_pred ccCCCceeEEeecCC-CCCCC--------CCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchh
Q 014151 200 YRNDPTIFAWELINE-PRCMS--------DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWA 270 (430)
Q Consensus 200 yk~~p~I~~wel~NE-p~~~~--------~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~ 270 (430)
|+++|+|++|||+|| |.... ....+.+.+|+++++++||++||+|+||+|..+. ..
T Consensus 5 ~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~~~~---~~------------ 69 (88)
T PF12876_consen 5 FGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGFWGG---DW------------ 69 (88)
T ss_dssp TT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B--S----T------------
T ss_pred hcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeecccC---CH------------
Confidence 999999999999999 76211 1124778999999999999999999999975321 10
Q ss_pred hccCcchhhccCCCCcceEEeeec
Q 014151 271 SALGSDFIRNSNNDNIDFASVHIY 294 (430)
Q Consensus 271 ~~~g~df~~~~~~~~iD~~s~H~Y 294 (430)
..+ .....+.+||+++|.|
T Consensus 70 ----~~~-~~~~~~~~DvisfH~Y 88 (88)
T PF12876_consen 70 ----EDL-EQLQAENLDVISFHPY 88 (88)
T ss_dssp ----THH-HHS--TT-SSEEB-EE
T ss_pred ----HHH-HHhchhcCCEEeeecC
Confidence 012 2234589999999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.2e-11 Score=123.28 Aligned_cols=115 Identities=25% Similarity=0.245 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCcccc----CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI----SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~----~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
..++++..|+++|+|+||+... |-.++. .|.....+.+..||++|++|+++||+|++++|.. .|+....
T Consensus 74 ~~~~~~~~ik~~G~n~VRiPi~----~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~---~~~~~~~ 146 (407)
T COG2730 74 ITEEDFDQIKSAGFNAVRIPIG----YWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGY---PGGNNGH 146 (407)
T ss_pred hhhhHHHHHHHcCCcEEEcccc----hhhhhccCCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEeccc---CCCCCCc
Confidence 3489999999999999999442 112222 3444445666799999999999999999999863 2332110
Q ss_pred hhhhhhhCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCC
Q 014151 154 VNWAWEEGIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRC 217 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~ 217 (430)
. . ......|.. .+..+.+.+.|+.+++| |++.+.|+++++.|||..
T Consensus 147 ~---------~-s~~~~~~~~~~~~~~~~~~~w~~ia~~--------f~~~~~VIg~~~~NEP~~ 193 (407)
T COG2730 147 E---------H-SGYTSDYKEENENVEATIDIWKFIANR--------FKNYDTVIGFELINEPNG 193 (407)
T ss_pred C---------c-ccccccccccchhHHHHHHHHHHHHHh--------ccCCCceeeeeeecCCcc
Confidence 0 0 111222333 56789999999999999 999999999999999995
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=120.84 Aligned_cols=155 Identities=17% Similarity=0.221 Sum_probs=123.7
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHH
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~ 118 (430)
..-|..++..|.+||+++.+.+...||.... ++.|++.++++|+.|+|+|-+++| |+-++|.||.|+-..
T Consensus 17 ~~~v~yd~~~~~idG~r~~~isGsIHY~R~~------pe~W~~~i~k~k~~Gln~IqtYVf----Wn~Hep~~g~y~FsG 86 (649)
T KOG0496|consen 17 SFNVTYDKRSLLIDGQRFILISGSIHYPRST------PEMWPDLIKKAKAGGLNVIQTYVF----WNLHEPSPGKYDFSG 86 (649)
T ss_pred eeEEeccccceeecCCeeEEEEeccccccCC------hhhhHHHHHHHHhcCCceeeeeee----cccccCCCCcccccc
Confidence 3346677889999999999888877776543 799999999999999999999998 667899999999888
Q ss_pred HHHHHHHHHHHHHcCCEEEEec----cCCcccCCCcchhhhhhhhhCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHhccC
Q 014151 119 FKALDHVIVEARKNGVRLLLSL----VNNLQAYGGKTQYVNWAWEEGIGISSSNDSFF-FDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l----~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~-~d~~~~~~~~~~~~~lv~R~n 193 (430)
.-.|-++|.+|++.|++|++-+ ...| ++||.+ -|.... ....|- .|+..++.++++++.|+.+.+
T Consensus 87 ~~DlvkFikl~~~~GLyv~LRiGPyIcaEw-~~GG~P---~wL~~~------pg~~~Rt~nepfk~~~~~~~~~iv~~mk 156 (649)
T KOG0496|consen 87 RYDLVKFIKLIHKAGLYVILRIGPYICAEW-NFGGLP---WWLRNV------PGIVFRTDNEPFKAEMERWTTKIVPMMK 156 (649)
T ss_pred hhHHHHHHHHHHHCCeEEEecCCCeEEecc-cCCCcc---hhhhhC------CceEEecCChHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999954 4457 478875 454321 112333 357899999999999999754
Q ss_pred CcccccccCCCceeEEeecCCCC
Q 014151 194 TITGVEYRNDPTIFAWELINEPR 216 (430)
Q Consensus 194 ~~tg~~yk~~p~I~~wel~NEp~ 216 (430)
..-+++---|++-++.||-.
T Consensus 157 ---~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 157 ---KLFASQGGPIILVQIENEYG 176 (649)
T ss_pred ---HHHhhcCCCEEEEEeechhh
Confidence 55567777788899999977
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.5e-09 Score=99.11 Aligned_cols=250 Identities=17% Similarity=0.190 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc--CCcccCCCcchhh
Q 014151 77 ARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV--NNLQAYGGKTQYV 154 (430)
Q Consensus 77 ~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~--~~w~~~gg~~~y~ 154 (430)
...++.|+.+|+.|+|.||+-++.+.....=+.--|.. ..++..-++-..|+..||||++++| ++|.+.+-+..--
T Consensus 63 g~~qD~~~iLK~~GvNyvRlRvwndP~dsngn~yggGn--nD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~kPk 140 (403)
T COG3867 63 GVRQDALQILKNHGVNYVRLRVWNDPYDSNGNGYGGGN--NDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQKKPK 140 (403)
T ss_pred ChHHHHHHHHHHcCcCeEEEEEecCCccCCCCccCCCc--chHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcCCcH
Confidence 45667799999999999998555432000000000111 2255556777788899999999998 3465554322112
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC-C-----ChHHHH
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD-P-----SGDTLQ 227 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~-~-----~~~~~~ 227 (430)
.|... .-...+.+..+|-+.+++. .++.. .+-+-+++||-+...- + .-+.+.
T Consensus 141 aW~~l-------------~fe~lk~avy~yTk~~l~~--------m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a 199 (403)
T COG3867 141 AWENL-------------NFEQLKKAVYSYTKYVLTT--------MKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMA 199 (403)
T ss_pred Hhhhc-------------CHHHHHHHHHHHHHHHHHH--------HHHcCCCccceEeccccCCceeccCCCCcChHHHH
Confidence 23311 1145677777888888887 66654 3456799999875321 1 224566
Q ss_pred HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc--chhhccCcchhhc-cCCCCcceEEeeecCCCCCCCcch
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE--MWASALGSDFIRN-SNNDNIDFASVHIYPDHWFHDLEF 304 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~--~w~~~~g~df~~~-~~~~~iD~~s~H~Y~~~w~~~~~~ 304 (430)
+.+++-+.+||+.+|+.+|.+-.. .++ +++ .|-. ... -..-..|++..-+||. |..+ .
T Consensus 200 ~L~n~g~~avrev~p~ikv~lHla------~g~----~n~~y~~~f------d~ltk~nvdfDVig~SyYpy-Whgt--l 260 (403)
T COG3867 200 ALLNAGIRAVREVSPTIKVALHLA------EGE----NNSLYRWIF------DELTKRNVDFDVIGSSYYPY-WHGT--L 260 (403)
T ss_pred HHHHHHhhhhhhcCCCceEEEEec------CCC----CCchhhHHH------HHHHHcCCCceEEeeecccc-ccCc--H
Confidence 677888899999999998887531 111 222 2221 110 0122457889999997 5432 1
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC---CC-------------CC--ChhHHHHHHHHHHHHHHHHHhc
Q 014151 305 EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL---IK-------------GF--EPSLRDKLYKTILDIVYKSAKR 366 (430)
Q Consensus 305 ~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~---~~-------------~~--~~~~r~~~~~~~~~~~~~~~~~ 366 (430)
.-+..-+. ..+.+ ++|-|+|.|.+.... ++ ++ +.+.|+.+.+++++.+.+--.
T Consensus 261 ----~nL~~nl~---dia~r-Y~K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~- 331 (403)
T COG3867 261 ----NNLTTNLN---DIASR-YHKDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPK- 331 (403)
T ss_pred ----HHHHhHHH---HHHHH-hcCeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCC-
Confidence 11111121 23343 899999999987321 00 12 236778999999988765422
Q ss_pred CCCcccceeeee
Q 014151 367 KRSGAGALIWQL 378 (430)
Q Consensus 367 ~~~~~G~~~W~~ 378 (430)
....|.|+|.=
T Consensus 332 -~~GlGvFYWEp 342 (403)
T COG3867 332 -SNGLGVFYWEP 342 (403)
T ss_pred -CCceEEEEecc
Confidence 23789999964
|
|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-10 Score=120.06 Aligned_cols=175 Identities=21% Similarity=0.331 Sum_probs=125.1
Q ss_pred eCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHH
Q 014151 45 NGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDH 124 (430)
Q Consensus 45 ~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~ 124 (430)
++..|+++|+++.+.|..++.-. +.++.+.++|+.||++|+|+||+-.| .|..++|+.|.||-+ .+|.
T Consensus 4 ~~~~~~~dg~~~~l~gG~y~p~~------~p~~~w~ddl~~mk~~G~N~V~ig~f---aW~~~eP~eG~fdf~---~~D~ 71 (673)
T COG1874 4 DGYSFIRDGRRILLYGGDYYPER------WPRETWMDDLRKMKALGLNTVRIGYF---AWNLHEPEEGKFDFT---WLDE 71 (673)
T ss_pred cccceeeCCceeEEeccccChHH------CCHHHHHHHHHHHHHhCCCeeEeeeE---EeeccCccccccCcc---cchH
Confidence 46678889999999998754322 23589999999999999999999333 388899999999955 6666
Q ss_pred H-HHHHHHcCCEEEEeccCCcccCCCcc-----hhhhhhhh--hCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 125 V-IVEARKNGVRLLLSLVNNLQAYGGKT-----QYVNWAWE--EGIGI--SSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 125 ~-l~~A~~~Gi~vil~l~~~w~~~gg~~-----~y~~W~~~--~G~~~--~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
. ++.|.+.||+||+.--. .|+.+ .||.|... .|... +..++-.++++-.++....+.+.+++|
T Consensus 72 ~~l~~a~~~Gl~vil~t~P----~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer--- 144 (673)
T COG1874 72 IFLERAYKAGLYVILRTGP----TGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRER--- 144 (673)
T ss_pred HHHHHHHhcCceEEEecCC----CCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHH---
Confidence 6 99999999999997521 12221 12332211 11110 123345577887888888888889988
Q ss_pred cccccccCCCceeEEeecCCCCCCC---CCChHHHHHHHHHHHHHHHhcCC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMS---DPSGDTLQDWIDEMSAFVKSIDK 242 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~---~~~~~~~~~w~~~~~~~Ir~~dp 242 (430)
.|+++|+|++|.+-||-.+.. ..+.+.++.|+++-...|+.++-
T Consensus 145 ----~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l~~ln~ 191 (673)
T COG1874 145 ----LYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSLDNLNE 191 (673)
T ss_pred ----HhccCCceeEEEccCccCCccccccccHHHHHHHHHhCcchHHhhhh
Confidence 499999999999999976632 22467778898876666665544
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-09 Score=105.99 Aligned_cols=244 Identities=19% Similarity=0.293 Sum_probs=147.3
Q ss_pred HHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCC
Q 014151 85 AGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIG 163 (430)
Q Consensus 85 ~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~ 163 (430)
.+-..-+|.+=. . ++.-|..+++.+|+|+ ++..|++++.|+++||+|-- +|. |+. +-|.|....
T Consensus 29 ~~~~~~Fn~~t~-e-N~~Kw~~~e~~~g~~~---~~~~D~~~~~a~~~g~~vrGH~Lv--W~~-----~~P~w~~~~--- 93 (320)
T PF00331_consen 29 ELFAKHFNSVTP-E-NEMKWGSIEPEPGRFN---FESADAILDWARENGIKVRGHTLV--WHS-----QTPDWVFNL--- 93 (320)
T ss_dssp HHHHHH-SEEEE-S-STTSHHHHESBTTBEE----HHHHHHHHHHHHTT-EEEEEEEE--ESS-----SS-HHHHTS---
T ss_pred HHHHHhCCeeee-c-cccchhhhcCCCCccC---ccchhHHHHHHHhcCcceeeeeEE--Ecc-----cccceeeec---
Confidence 333455786664 1 1224677888999998 78899999999999999954 221 532 236787531
Q ss_pred CCCCCCCCCCCH---HHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC------C--hHHH-HHHHH
Q 014151 164 ISSSNDSFFFDP---SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP------S--GDTL-QDWID 231 (430)
Q Consensus 164 ~~~~~~~f~~d~---~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~------~--~~~~-~~w~~ 231 (430)
.-+... ..++..+++|+.+++| |++...|.+|++.|||-..... + .+.+ ..++.
T Consensus 94 ------~~~~~~~~~~~~~~l~~~I~~v~~~--------y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~ 159 (320)
T PF00331_consen 94 ------ANGSPDEKEELRARLENHIKTVVTR--------YKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIA 159 (320)
T ss_dssp ------TTSSBHHHHHHHHHHHHHHHHHHHH--------TTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHH
T ss_pred ------cCCCcccHHHHHHHHHHHHHHHHhH--------hccccceEEEEEeeecccCCCccccccCChhhhcccHhHHH
Confidence 001222 3899999999999999 9988899999999999865420 0 0111 24778
Q ss_pred HHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceE--EeeecCCCCCCCcchhhh
Q 014151 232 EMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFA--SVHIYPDHWFHDLEFEDD 307 (430)
Q Consensus 232 ~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~--s~H~Y~~~w~~~~~~~~~ 307 (430)
.+.+..|+.+|+....+..-+. ..+ ...... ...++.+ ..-.||-+ +.|+-....
T Consensus 160 ~aF~~A~~~~P~a~L~~NDy~~---~~~-------~k~~~~--~~lv~~l~~~gvpIdgIG~Q~H~~~~~~--------- 218 (320)
T PF00331_consen 160 DAFRAAREADPNAKLFYNDYNI---ESP-------AKRDAY--LNLVKDLKARGVPIDGIGLQSHFDAGYP--------- 218 (320)
T ss_dssp HHHHHHHHHHTTSEEEEEESST---TST-------HHHHHH--HHHHHHHHHTTHCS-EEEEEEEEETTSS---------
T ss_pred HHHHHHHHhCCCcEEEeccccc---cch-------HHHHHH--HHHHHHHHhCCCccceechhhccCCCCC---------
Confidence 8889999999998877753221 111 000000 0011111 11114543 667655431
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC---CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCc
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG---FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGME 384 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~ 384 (430)
...+...++.... .|+||.|+|+.+...... ..+..++++|+.++..+.+.... .+.|..+|.+.+. .
T Consensus 219 ----~~~i~~~l~~~~~-~Gl~i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~--~v~git~Wg~~D~--~ 289 (320)
T PF00331_consen 219 ----PEQIWNALDRFAS-LGLPIHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPA--AVEGITWWGFTDG--Y 289 (320)
T ss_dssp ----HHHHHHHHHHHHT-TTSEEEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHC--TEEEEEESSSBTT--G
T ss_pred ----HHHHHHHHHHHHH-cCCceEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCcc--CCCEEEEECCCCC--C
Confidence 1123344444443 899999999999887532 11456778888777766654111 6999999999986 4
Q ss_pred cCC
Q 014151 385 EYN 387 (430)
Q Consensus 385 ~~~ 387 (430)
+|-
T Consensus 290 sW~ 292 (320)
T PF00331_consen 290 SWR 292 (320)
T ss_dssp STT
T ss_pred ccc
Confidence 563
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=98.97 Aligned_cols=274 Identities=17% Similarity=0.244 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHH-HcCCCEEEEcc-ccCCCCCcc-c-cCCC--CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCC
Q 014151 76 RARVGAMLQAGA-KMGLTVCRTWA-FNDGGYNSL-Q-ISPG--QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGG 149 (430)
Q Consensus 76 ~~~~~~~~~~~~-~~G~n~vR~~~-~~~g~~~~~-~-~~pg--~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg 149 (430)
.+.++..+..++ +.|+..||+|. |++. -... + ...| .|| |..+|.++|...++||++.+.|--
T Consensus 38 ~~~~q~~l~~~~~~~gf~yvR~h~l~~dd-m~~~~~~~~~~~~~Yn---f~~lD~i~D~l~~~g~~P~vel~f------- 106 (486)
T PF01229_consen 38 RADWQEQLRELQEELGFRYVRFHGLFSDD-MMVYSESDEDGIPPYN---FTYLDQILDFLLENGLKPFVELGF------- 106 (486)
T ss_dssp BHHHHHHHHHHHCCS--SEEEES-TTSTT-TT-EEEEETTEEEEE-----HHHHHHHHHHHHCT-EEEEEE-S-------
T ss_pred hHHHHHHHHHHHhccCceEEEEEeeccCc-hhhccccccCCCCcCC---hHHHHHHHHHHHHcCCEEEEEEEe-------
Confidence 466777777776 78999999975 4432 1111 1 1222 266 899999999999999999998731
Q ss_pred cchhhhhhhhhCCCCCCCCCCCC-----CCHHHHHHH----HHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC
Q 014151 150 KTQYVNWAWEEGIGISSSNDSFF-----FDPSIHKYF----KHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS 219 (430)
Q Consensus 150 ~~~y~~W~~~~G~~~~~~~~~f~-----~d~~~~~~~----~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~ 219 (430)
+ |.+... + ....|+ .-|+-.+.+ +.+++++++| |+.+. .-.-||++|||+...
T Consensus 107 ~---p~~~~~-~-----~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~R--------YG~~ev~~W~fEiWNEPd~~~ 169 (486)
T PF01229_consen 107 M---PMALAS-G-----YQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDR--------YGIEEVSTWYFEIWNEPDLKD 169 (486)
T ss_dssp B----GGGBS-S-------EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHH--------HHHHHHTTSEEEESS-TTSTT
T ss_pred c---hhhhcC-C-----CCccccccCCcCCcccHHHHHHHHHHHHHHHHhh--------cCCccccceeEEeCcCCCccc
Confidence 1 111100 0 001111 112333444 4555555555 65321 123479999999753
Q ss_pred C---CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCC
Q 014151 220 D---PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPD 296 (430)
Q Consensus 220 ~---~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~ 296 (430)
. ...+.+.+.++..+.+||+++|+..|. +.++.. .. ..|-. ...+|.+... -.+||+|+|.|+.
T Consensus 170 f~~~~~~~ey~~ly~~~~~~iK~~~p~~~vG--Gp~~~~-~~--------~~~~~-~~l~~~~~~~-~~~DfiS~H~y~~ 236 (486)
T PF01229_consen 170 FWWDGTPEEYFELYDATARAIKAVDPELKVG--GPAFAW-AY--------DEWCE-DFLEFCKGNN-CPLDFISFHSYGT 236 (486)
T ss_dssp TSGGG-HHHHHHHHHHHHHHHHHH-TTSEEE--EEEEET-T---------THHHH-HHHHHHHHCT----SEEEEEEE-B
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHhCCCCccc--Cccccc-cH--------HHHHH-HHHHHHhcCC-CCCCEEEEEeccc
Confidence 2 124567788899999999999998763 222110 00 12221 1122333222 4589999999995
Q ss_pred CCCCC--cchhhhHHHHHH---HHHH---HHHhhhhcCCCcEEEEecCCCCCCCCC--ChhHHHHHHHHHHHHHHHHHhc
Q 014151 297 HWFHD--LEFEDDLKFVTK---WMLS---HIEDGDKELNKPVFFTEYGLSNLIKGF--EPSLRDKLYKTILDIVYKSAKR 366 (430)
Q Consensus 297 ~w~~~--~~~~~~~~~~~~---~l~~---~~~~a~~~~gkPv~v~EfG~~~~~~~~--~~~~r~~~~~~~~~~~~~~~~~ 366 (430)
..... ............ -+.. .+.... ..++|+.++||......... +...+.+|+-. .++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k---~lL~~~-- 310 (486)
T PF01229_consen 237 DSAEDINENMYERIEDSRRLFPELKETRPIINDEA-DPNLPLYITEWNASISPRNPQHDTCFKAAYIAK---NLLSND-- 310 (486)
T ss_dssp ESESE-SS-EEEEB--HHHHHHHHHHHHHHHHTSS-STT--EEEEEEES-SSTT-GGGGSHHHHHHHHH----HHHHG--
T ss_pred ccccccchhHHhhhhhHHHHHHHHHHHHHHHhhcc-CCCCceeecccccccCCCcchhccccchhhHHH---HHHHhh--
Confidence 42110 000001111111 1111 112212 25789999999987654211 11234444322 123332
Q ss_pred CCCcccceeeeeccCC----C--ccCCCCceEEcCC
Q 014151 367 KRSGAGALIWQLFVEG----M--EEYNDDFGIVPWE 396 (430)
Q Consensus 367 ~~~~~G~~~W~~~~~~----~--~~~~dg~~i~~~~ 396 (430)
+....+..+|.+.+.- . .....||++....
T Consensus 311 ~~~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~ 346 (486)
T PF01229_consen 311 GAFLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKL 346 (486)
T ss_dssp GGT-SEEEES-SBS---TTSS-SSSSSS-S-SEECC
T ss_pred hhhhhhhhccchhhhhhccCCCCCceecchhhhhcc
Confidence 1124567889998631 1 1234788877654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.3e-08 Score=97.43 Aligned_cols=118 Identities=17% Similarity=0.260 Sum_probs=88.2
Q ss_pred EEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHH
Q 014151 49 FMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVE 128 (430)
Q Consensus 49 f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~ 128 (430)
|.+||.|+++.|.|-+-..... +..+-+.++-.|+..++.|+|++|+|.- |.|.. |++.+.
T Consensus 330 fkin~~pvflkg~nwip~s~f~-dr~t~~~~~~LL~Sv~e~~MN~lRVWGG------------GvYEs------d~FY~l 390 (867)
T KOG2230|consen 330 FKINDEPVFLKGTNWIPVSMFR-DRENIAKTEFLLDSVAEVGMNMLRVWGG------------GVYES------DYFYQL 390 (867)
T ss_pred EEEcCcEEEeecCCccChHHHH-hhHHHHHHHHHHHHHHHhCcceEEEecC------------ccccc------hhHHHH
Confidence 4469999999999933211111 2235678889999999999999999862 33432 577899
Q ss_pred HHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeE
Q 014151 129 ARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208 (430)
Q Consensus 129 A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~ 208 (430)
|++.||.| |+++ ..++ .-+-+|.+.....++.+++-+.| .+.||+|+.
T Consensus 391 ad~lGilV-------WQD~-------MFAC----------AlYPt~~eFl~sv~eEV~yn~~R--------ls~HpSviI 438 (867)
T KOG2230|consen 391 ADSLGILV-------WQDM-------MFAC----------ALYPTNDEFLSSVREEVRYNAMR--------LSHHPSVII 438 (867)
T ss_pred hhhcccee-------hhhh-------HHHh----------hcccCcHHHHHHHHHHHHHHHHh--------hccCCeEEE
Confidence 99999988 7653 1222 11236778888889999999999 999999999
Q ss_pred EeecCCCCC
Q 014151 209 WELINEPRC 217 (430)
Q Consensus 209 wel~NEp~~ 217 (430)
|.--||-+.
T Consensus 439 fsgNNENEa 447 (867)
T KOG2230|consen 439 FSGNNENEA 447 (867)
T ss_pred EeCCCccHH
Confidence 999999764
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.5e-06 Score=82.07 Aligned_cols=116 Identities=23% Similarity=0.442 Sum_probs=82.6
Q ss_pred CCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHH
Q 014151 103 GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYF 181 (430)
Q Consensus 103 ~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~ 181 (430)
-|..+++++|.|+ |+.=|++++-|++|||.+-- +|. |.. +.++|.... + ..-+...+.+
T Consensus 68 Kwe~i~p~~G~f~---Fe~AD~ia~FAr~h~m~lhGHtLv--W~~-----q~P~W~~~~---------e-~~~~~~~~~~ 127 (345)
T COG3693 68 KWEAIEPERGRFN---FEAADAIANFARKHNMPLHGHTLV--WHS-----QVPDWLFGD---------E-LSKEALAKMV 127 (345)
T ss_pred ccccccCCCCccC---ccchHHHHHHHHHcCCeeccceee--ecc-----cCCchhhcc---------c-cChHHHHHHH
Confidence 3778889999998 77789999999999997732 121 521 446776321 0 2346789999
Q ss_pred HHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-------ChHHHHHHHHHHHHHHHhcCCCCEEEE
Q 014151 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-------SGDTLQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 182 ~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-------~~~~~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
+++|..++.| ||+. +.+|++.|||-..... +.-.-.+|++......|+.||+.-..+
T Consensus 128 e~hI~tV~~r--------Ykg~--~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~ 191 (345)
T COG3693 128 EEHIKTVVGR--------YKGS--VASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVI 191 (345)
T ss_pred HHHHHHHHHh--------ccCc--eeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEe
Confidence 9999999999 9996 9999999999763210 001123456667777899999865554
|
|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.9e-06 Score=74.48 Aligned_cols=141 Identities=18% Similarity=0.312 Sum_probs=96.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ccccCC-C-CCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRT-WAFNDG-G-YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGG 149 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~-~~~~~g-~-~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg 149 (430)
.++.++|+++|+.|+++|+++|=+ |.-..+ . ++. +-.++.+....-+.|+.++++|+++||+|.+.|...
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps-~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~------ 88 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPS-KLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFD------ 88 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCc-cccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCC------
Confidence 467899999999999999998854 221111 0 111 111333444455789999999999999999988531
Q ss_pred cchhhhhhhhhCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHH
Q 014151 150 KTQYVNWAWEEGIGISSSNDSFFFDPS-IHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQD 228 (430)
Q Consensus 150 ~~~y~~W~~~~G~~~~~~~~~f~~d~~-~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~ 228 (430)
+.|... .|++ ..+.-+..++++.++ |++||++-+|=|-.|+..... ...+
T Consensus 89 ----~~~w~~-------------~~~~~~~~~~~~v~~el~~~--------yg~h~sf~GWYip~E~~~~~~----~~~~ 139 (166)
T PF14488_consen 89 ----PDYWDQ-------------GDLDWEAERNKQVADELWQR--------YGHHPSFYGWYIPYEIDDYNW----NAPE 139 (166)
T ss_pred ----chhhhc-------------cCHHHHHHHHHHHHHHHHHH--------HcCCCCCceEEEecccCCccc----chHH
Confidence 112110 1221 222334577778888 999999999999999987542 2345
Q ss_pred HHHHHHHHHHhcCCCCEEEEc
Q 014151 229 WIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G 249 (430)
..+.+..++|++.|+.+|++.
T Consensus 140 ~~~~l~~~lk~~s~~~Pv~IS 160 (166)
T PF14488_consen 140 RFALLGKYLKQISPGKPVMIS 160 (166)
T ss_pred HHHHHHHHHHHhCCCCCeEEe
Confidence 568888999999999999874
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.5e-06 Score=79.31 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=76.4
Q ss_pred EeecCCCCCCCC--CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCc-cCCC-CCCCcccCccchhhccCcchhhccC-C
Q 014151 209 WELINEPRCMSD--PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF-YGPK-SPKRLTVNPEMWASALGSDFIRNSN-N 283 (430)
Q Consensus 209 wel~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~-~~~~-~~~~~~~np~~w~~~~g~df~~~~~-~ 283 (430)
+..+|||+.... .+++...+...+..+.+|. +...|. +... +... .+ ....|-. +|..... .
T Consensus 69 ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~--sPa~~~~~~~~~-----~g~~Wl~----~F~~~~~~~ 135 (239)
T PF11790_consen 69 LLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLG--SPAVAFTNGGTP-----GGLDWLS----QFLSACARG 135 (239)
T ss_pred eeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEE--CCeecccCCCCC-----CccHHHH----HHHHhcccC
Confidence 667899998652 2344444434454455663 443322 1111 0000 00 1123542 4555443 4
Q ss_pred CCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 014151 284 DNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKS 363 (430)
Q Consensus 284 ~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~ 363 (430)
..+||+++|.|... . .- +..+++...+..+|||+|+|||........+++.+.+++++++..+.+.
T Consensus 136 ~~~D~iavH~Y~~~------~----~~----~~~~i~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~~~~~~ld~~ 201 (239)
T PF11790_consen 136 CRVDFIAVHWYGGD------A----DD----FKDYIDDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLRQALPWLDSQ 201 (239)
T ss_pred CCccEEEEecCCcC------H----HH----HHHHHHHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 58999999999322 1 11 2333444433488999999999876433446788899999888766442
Q ss_pred HhcCCCcccceeeee
Q 014151 364 AKRKRSGAGALIWQL 378 (430)
Q Consensus 364 ~~~~~~~~G~~~W~~ 378 (430)
..+...+|--
T Consensus 202 -----~~VeryawF~ 211 (239)
T PF11790_consen 202 -----PYVERYAWFG 211 (239)
T ss_pred -----CCeeEEEecc
Confidence 3444555544
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.3e-05 Score=72.50 Aligned_cols=205 Identities=20% Similarity=0.245 Sum_probs=125.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
+.+.+++..||+.++..+. .||++. +| -..|..++.+|.+.|++|++.+ |. +
T Consensus 59 CKSa~~~~sDLe~l~~~t~-~IR~Y~-sD-----------------Cn~le~v~pAa~~~g~kv~lGi---w~--t---- 110 (305)
T COG5309 59 CKSADQVASDLELLASYTH-SIRTYG-SD-----------------CNTLENVLPAAEASGFKVFLGI---WP--T---- 110 (305)
T ss_pred CcCHHHHHhHHHHhccCCc-eEEEee-cc-----------------chhhhhhHHHHHhcCceEEEEE---ee--c----
Confidence 4578999999999999988 999976 33 1234578899999999999876 31 1
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHH
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDE 232 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~ 232 (430)
| +......+-+..-..- +..-+.|....++||.-...+.....+.+.+..
T Consensus 111 ---------------------d-d~~~~~~~til~ay~~--------~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~ 160 (305)
T COG5309 111 ---------------------D-DIHDAVEKTILSAYLP--------YNGWDDVTTVTVGNEALNRNDLTASQLIEYIDD 160 (305)
T ss_pred ---------------------c-chhhhHHHHHHHHHhc--------cCCCCceEEEEechhhhhcCCCCHHHHHHHHHH
Confidence 1 0111112122222223 667788999999999877666677899999999
Q ss_pred HHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHH
Q 014151 233 MSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVT 312 (430)
Q Consensus 233 ~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~ 312 (430)
...++++.+-+-+|++- +.+ .. ...||. .+...||+..|.-|. |.....-...-.|+.
T Consensus 161 vrsav~~agy~gpV~T~-dsw-~~-----~~~np~--------------l~~~SDfia~N~~aY-wd~~~~a~~~~~f~~ 218 (305)
T COG5309 161 VRSAVKEAGYDGPVTTV-DSW-NV-----VINNPE--------------LCQASDFIAANAHAY-WDGQTVANAAGTFLL 218 (305)
T ss_pred HHHHHHhcCCCCceeec-ccc-ee-----eeCChH--------------Hhhhhhhhhcccchh-ccccchhhhhhHHHH
Confidence 99999988877777653 222 10 001221 134457766665443 332111111112221
Q ss_pred HHHHHHHHhhhhcCCCcEEEEecCCCCCCCCC-----ChhHHHHHHHHHHHH
Q 014151 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLIKGF-----EPSLRDKLYKTILDI 359 (430)
Q Consensus 313 ~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~-----~~~~r~~~~~~~~~~ 359 (430)
.-+ +.++.+. ...||++|+|-|++..+..+ +..++..+++.++..
T Consensus 219 ~q~-e~vqsa~-g~~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~ 268 (305)
T COG5309 219 EQL-ERVQSAC-GTKKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNA 268 (305)
T ss_pred HHH-HHHHHhc-CCCccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhh
Confidence 112 2233333 24599999999999886321 456777777766543
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00017 Score=71.94 Aligned_cols=225 Identities=19% Similarity=0.217 Sum_probs=95.5
Q ss_pred HHcCCCEEEEcccc----CC-------CC---CccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 87 AKMGLTVCRTWAFN----DG-------GY---NSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 87 ~~~G~n~vR~~~~~----~g-------~~---~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
+-+|++.+|.-+-. .+ .| +.+.+..|.||-+.=..=..++++|+++|+..++.+.+. .
T Consensus 57 ~GlGLSI~RyNIGgGs~~~~d~~~i~~~~rr~e~f~~~dg~yDW~~D~gQrwfL~~Ak~rGV~~f~aFSNS--P------ 128 (384)
T PF14587_consen 57 KGLGLSIWRYNIGGGSAEQGDSSGIRDPWRRAESFLPADGSYDWDADAGQRWFLKAAKERGVNIFEAFSNS--P------ 128 (384)
T ss_dssp -S---S-EEEE---STTTTTTSS--SSSTT----SB-TTS-B-TTSSHHHHHHHHHHHHTT---EEEE-SS--S------
T ss_pred CCceeeeeeeccccCCcccccCccCCCcccCCccccCCCCCcCCCCCHHHHHHHHHHHHcCCCeEEEeecC--C------
Confidence 46899999985421 00 02 123345566763222333468999999999998866542 1
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC---C-----CCh
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS---D-----PSG 223 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~---~-----~~~ 223 (430)
|-|....|...+.....---.++..+.|.+|+..++++ |+++- .|-..+-+|||...- . -+.
T Consensus 129 -P~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~--------~~~~GI~f~~IsP~NEP~~~W~~~~QEG~~~~~ 199 (384)
T PF14587_consen 129 -PWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADVVKH--------YKKWGINFDYISPFNEPQWNWAGGSQEGCHFTN 199 (384)
T ss_dssp --GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHH--------HHCTT--EEEEE--S-TTS-GG--SS-B----H
T ss_pred -CHHHhcCCCCCCCCccccccChhHHHHHHHHHHHHHHH--------HHhcCCccceeCCcCCCCCCCCCCCcCCCCCCH
Confidence 33443334322111111111256789999999999999 75443 456678999998651 0 134
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCC------CCCcccCc--cchhhccCcchhhccCCCCc-ceEEeeec
Q 014151 224 DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKS------PKRLTVNP--EMWASALGSDFIRNSNNDNI-DFASVHIY 294 (430)
Q Consensus 224 ~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~------~~~~~~np--~~w~~~~g~df~~~~~~~~i-D~~s~H~Y 294 (430)
+...+.++.+.+.+++...+..|+++.++-+.... +++ .|. .-|. .....++.+ .++| .+++-|.|
T Consensus 200 ~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r--~~~i~~ff~-~~s~~yi~~--l~~v~~~i~~HsY 274 (384)
T PF14587_consen 200 EEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGR--GNQIEAFFN-PDSSTYIGD--LPNVPNIISGHSY 274 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS-----HHHHHHS-TTSTT--TT---TTEEEEEEE--T
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhh--hhhHHhhcC-CCchhhhhc--cccchhheeeccc
Confidence 66788899999999998888878887655321111 000 000 0011 111222222 2333 47899999
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhhhh-cCCCcEEEEecCCCCCC
Q 014151 295 PDHWFHDLEFEDDLKFVTKWMLSHIEDGDK-ELNKPVFFTEYGLSNLI 341 (430)
Q Consensus 295 ~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~-~~gkPv~v~EfG~~~~~ 341 (430)
-.. .. . ..+.-.++-+.+ .+.+ ..+..++.+||+...+.
T Consensus 275 wt~---~~-~-~~l~~~R~~~~~---~~~~~~~~~~~wqtE~~il~~~ 314 (384)
T PF14587_consen 275 WTD---SP-W-DDLRDIRKQLAD---KLDKYSPGLKYWQTEYCILGDN 314 (384)
T ss_dssp T-S---SS-H-HHHHHHHHHHHH---HHHTTSS--EEEE----S----
T ss_pred ccC---CC-H-HHHHHHHHHHHH---HHHhhCcCCceeeeeeeeccCC
Confidence 543 21 1 112222222222 2233 13888999999998774
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0043 Score=61.33 Aligned_cols=209 Identities=16% Similarity=0.296 Sum_probs=115.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCC--C-CccccC----CCC-CChHHHHHHHHHHHHHHHcCCEEEEecc-CC-c
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGG--Y-NSLQIS----PGQ-FDERVFKALDHVIVEARKNGVRLLLSLV-NN-L 144 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~--~-~~~~~~----pg~-~de~~l~~lD~~l~~A~~~Gi~vil~l~-~~-w 144 (430)
+++++++.++.++++|+|+|=+-+...|. | ..+.|. .|. .....++-|..+|++|+++||.|.-=+. .. .
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~ 96 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNA 96 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCC
Confidence 68899999999999999988764433331 1 112211 111 1123577899999999999999975330 00 0
Q ss_pred ccCCC-cchhhhhhh--hhCCCCC---CCCCCCCC---CHHHHHHHHHHHHHHHhccCCcccccccCC---CceeEEee-
Q 014151 145 QAYGG-KTQYVNWAW--EEGIGIS---SSNDSFFF---DPSIHKYFKHYVKTVLTRKNTITGVEYRND---PTIFAWEL- 211 (430)
Q Consensus 145 ~~~gg-~~~y~~W~~--~~G~~~~---~~~~~f~~---d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~---p~I~~wel- 211 (430)
...+. ....+.|.. ..|.... ......|- .|++++...+.+++|+++-. +-|+++=+. |...+++.
T Consensus 97 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIhlDdy~yp~~~~g~~~~ 175 (311)
T PF02638_consen 97 PDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIHLDDYFYPPPSFGYDFP 175 (311)
T ss_pred CchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEEecccccccccCCCCCc
Confidence 00000 122344532 1111110 11223343 47899999999999999943 556554321 11111110
Q ss_pred ---------cCCCCCCCCC------ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcc
Q 014151 212 ---------INEPRCMSDP------SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSD 276 (430)
Q Consensus 212 ---------~NEp~~~~~~------~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~d 276 (430)
..+|...... ..+.+..+++++.+.||+++|+..+++...|.++.+... .-+|
T Consensus 176 ~~~~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp~g~~~~~y~~------------~~qD 243 (311)
T PF02638_consen 176 DVAAYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISPFGIWNSAYDD------------YYQD 243 (311)
T ss_pred cHHHHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeecchhhhhhh------------eecc
Confidence 0001000000 134566678899999999999999988655544221110 0122
Q ss_pred hhhccCCCCcceEEeeecCC
Q 014151 277 FIRNSNNDNIDFASVHIYPD 296 (430)
Q Consensus 277 f~~~~~~~~iD~~s~H~Y~~ 296 (430)
...-+....||++..-.|-.
T Consensus 244 ~~~W~~~G~iD~i~Pq~Y~~ 263 (311)
T PF02638_consen 244 WRNWLKEGYIDYIVPQIYWS 263 (311)
T ss_pred HHHHHhcCCccEEEeeeccc
Confidence 22223446799999998854
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.013 Score=57.46 Aligned_cols=242 Identities=13% Similarity=0.153 Sum_probs=116.9
Q ss_pred HHHHHHHHHH-HHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQA-GAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~-~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
....+..|.. .-++|+..+|+.+-+...|. . |.+|.. .+.|- .-.-+..+|++|+-+. |.. |
T Consensus 64 aa~l~t~Fgng~~~lg~si~Rv~I~~ndfsl--~---g~~d~w-~kels-~Ak~~in~g~ivfASP---Wsp-------P 126 (433)
T COG5520 64 AAQLETLFGNGANQLGFSILRVPIDSNDFSL--G---GSADNW-YKELS-TAKSAINPGMIVFASP---WSP-------P 126 (433)
T ss_pred HHHHHHHhcCCccccCceEEEEEeccccccc--C---CCcchh-hhhcc-cchhhcCCCcEEEecC---CCC-------c
Confidence 4455555543 23689999999663211111 0 222211 00000 1122667899887654 542 3
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCCC-----ChHHHHH
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSDP-----SGDTLQD 228 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~~-----~~~~~~~ 228 (430)
.|....+...+.+... --++....|.+++...|.. ++++. .+-+..+.|||.....- .++...+
T Consensus 127 a~Mktt~~~ngg~~g~--Lk~e~Ya~yA~~l~~fv~~--------m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~r 196 (433)
T COG5520 127 ASMKTTNNRNGGNAGR--LKYEKYADYADYLNDFVLE--------MKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELR 196 (433)
T ss_pred hhhhhccCcCCccccc--cchhHhHHHHHHHHHHHHH--------HHhCCCceeEEeeccCCcccCCCCcccccHHHHHH
Confidence 3443321111010001 1234555566666666665 66554 68889999999986321 1233333
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhH
Q 014151 229 WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL 308 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~ 308 (430)
+ |.++.+.+..+.-|.+- +.+. ..| .|+.. -+....+...+|++..|.|...-..- +
T Consensus 197 F---~~qyl~si~~~~rV~~p-es~~---------~~~-~~~dp---~lnDp~a~a~~~ilg~H~Ygg~v~~~---p--- 253 (433)
T COG5520 197 F---MRQYLASINAEMRVIIP-ESFK---------DLP-NMSDP---ILNDPKALANMDILGTHLYGGQVSDQ---P--- 253 (433)
T ss_pred H---HHHhhhhhccccEEecc-hhcc---------ccc-ccccc---cccCHhHhcccceeEeeecccccccc---h---
Confidence 3 33333333333333321 1111 111 11110 01111245689999999998652210 0
Q ss_pred HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 309 KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 309 ~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
..+.... ..+|-|+++|.-....+++. ..| +.. .+...+.....++ +..|+..|.+.-+
T Consensus 254 --------~~lak~~-~~gKdlwmte~y~~esd~~s--~dr-~~~-~~~~hi~~gm~~g-g~~ayv~W~i~~~ 312 (433)
T COG5520 254 --------YPLAKQK-PAGKDLWMTECYPPESDPNS--ADR-EAL-HVALHIHIGMTEG-GFQAYVWWNIRLD 312 (433)
T ss_pred --------hhHhhCC-CcCCceEEeecccCCCCCCc--chH-HHH-HHHHHHHhhcccc-CccEEEEEEEeec
Confidence 0011122 25899999998776655432 233 222 2333444444554 7899999998653
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.01 Score=62.22 Aligned_cols=256 Identities=16% Similarity=0.167 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcccc-CC---CCCccccCCC-----CCC--hHHHHHHHHHHHHHHHc--CCEEEEeccCCc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFN-DG---GYNSLQISPG-----QFD--ERVFKALDHVIVEARKN--GVRLLLSLVNNL 144 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~-~g---~~~~~~~~pg-----~~d--e~~l~~lD~~l~~A~~~--Gi~vil~l~~~w 144 (430)
.++..|. =.-+|++.+|+.+-+ |- .|. +-..|+ .|+ .+..+..=-+|..|.+. +|+++.+. |
T Consensus 102 ll~~~F~-~~G~g~s~~R~pIgssDfs~~~Yt-y~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSp---W 176 (496)
T PF02055_consen 102 LLRSLFS-EDGIGYSLLRVPIGSSDFSTRPYT-YDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASP---W 176 (496)
T ss_dssp HHHHHHS-TTTT---EEEEEES--SSSSS----ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEE---S
T ss_pred HHHHHhh-cCCceEEEEEeeccCcCCcCCccc-ccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEec---C
Confidence 3555555 256899999996632 21 111 111122 222 11111222355555443 58887664 6
Q ss_pred ccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC----
Q 014151 145 QAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS---- 219 (430)
Q Consensus 145 ~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~---- 219 (430)
.. |.|....+.-.+...-.=-..+++.+.|.+|+.+.++. |+.+- .|.+..+.|||....
T Consensus 177 Sp-------P~WMKtn~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~a--------Y~~~GI~i~aiT~QNEP~~~~~~~~ 241 (496)
T PF02055_consen 177 SP-------PAWMKTNGSMNGGGSLKGSLGDEYYQAYADYFVKFIQA--------YKKEGIPIWAITPQNEPDNGSDPNY 241 (496)
T ss_dssp ----------GGGBTTSSSCSS-BBSCGTTSHHHHHHHHHHHHHHHH--------HHCTT--ESEEESSSSCCGGGSTT-
T ss_pred CC-------CHHHccCCcCcCCCccCCCCCchhHHHHHHHHHHHHHH--------HHHCCCCeEEEeccCCCCCCCCCCC
Confidence 42 56776533211000000011357888899999898888 88775 688889999998521
Q ss_pred -CC----ChHHHHHHHHH-HHHHHHhcCC--CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEe
Q 014151 220 -DP----SGDTLQDWIDE-MSAFVKSIDK--KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASV 291 (430)
Q Consensus 220 -~~----~~~~~~~w~~~-~~~~Ir~~dp--~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~ 291 (430)
.+ .++..++|++. +..++++..+ +.-|.+..+.... .| .|....-.|. -+.+.+|-+.+
T Consensus 242 ~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g~d~kI~~~D~n~~~---------~~-~~~~~il~d~---~A~~yv~GiA~ 308 (496)
T PF02055_consen 242 PWPSMGWTPEEQADFIKNYLGPALRKAGLGKDVKILIYDHNRDN---------LP-DYADTILNDP---EAAKYVDGIAF 308 (496)
T ss_dssp SSC--B--HHHHHHHHHHTHHHHHHTSTT-TTSEEEEEEEEGGG---------TT-HHHHHHHTSH---HHHTTEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCCcc---------cc-hhhhhhhcCh---hhHhheeEEEE
Confidence 11 35778889886 8889998877 4444443221110 11 2332100011 13467999999
Q ss_pred eecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC----CChhHHH-HHHHHHHHHHHHHHhc
Q 014151 292 HIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG----FEPSLRD-KLYKTILDIVYKSAKR 366 (430)
Q Consensus 292 H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~----~~~~~r~-~~~~~~~~~~~~~~~~ 366 (430)
|.|.+. .. .. -|. +..++..+|.++.+|-.......+ ...=.|. .|...++ .....
T Consensus 309 HwY~g~---~~--~~-------~l~---~~h~~~P~k~l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii----~~lnn 369 (496)
T PF02055_consen 309 HWYGGD---PS--PQ-------ALD---QVHNKFPDKFLLFTEACCGSWNWDTSVDLGSWDRAERYAHDII----GDLNN 369 (496)
T ss_dssp EETTCS----H--CH-------HHH---HHHHHSTTSEEEEEEEESS-STTS-SS-TTHHHHHHHHHHHHH----HHHHT
T ss_pred ECCCCC---ch--hh-------HHH---HHHHHCCCcEEEeeccccCCCCcccccccccHHHHHHHHHHHH----HHHHh
Confidence 999763 10 00 011 112224789999999865543211 1111232 2323333 33333
Q ss_pred CCCcccceeeeeccC--CCccCC
Q 014151 367 KRSGAGALIWQLFVE--GMEEYN 387 (430)
Q Consensus 367 ~~~~~G~~~W~~~~~--~~~~~~ 387 (430)
...|++.|.+.-+ +-+.|.
T Consensus 370 --~~~gw~~WNl~LD~~GGP~~~ 390 (496)
T PF02055_consen 370 --WVSGWIDWNLALDENGGPNWV 390 (496)
T ss_dssp --TEEEEEEEESEBETTS---TT
T ss_pred --hceeeeeeeeecCCCCCCccc
Confidence 4789999998643 224554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=7.8e-06 Score=82.21 Aligned_cols=320 Identities=24% Similarity=0.352 Sum_probs=168.7
Q ss_pred CCCCCcEEEeCCeEE-ECCeE------EEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEcccc--C--C--
Q 014151 36 EPEMGFVTRNGTHFM-LDGKA------LYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN--D--G-- 102 (430)
Q Consensus 36 ~~~~gfv~~~g~~f~-~~G~~------~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~--~--g-- 102 (430)
-+..+||.++..|+. +||++ ...+|.| ...++..++.+..+++.++++.+-. + |
T Consensus 32 le~a~~vg~k~lR~fiLDgEdc~d~~G~~na~s~-------------~~y~~~fla~a~~l~lkvlitlivg~~hmgg~N 98 (587)
T COG3934 32 LEPAGFVGVKDLRLFILDGEDCRDKEGYRNAGSN-------------VWYAAWFLAPAGYLDLKVLITLIVGLKHMGGTN 98 (587)
T ss_pred cccccCccceeEEEEEecCcchhhhhceeccccc-------------HHHHHHHhhhcccCcceEEEEEeecccccCcce
Confidence 356688999877755 79999 4444544 4566777888889999988875422 1 1
Q ss_pred ---CCCccc-cCCCCCCh-----------HHHH--HHHHHHHHHHHcCCEE---EEeccCCcccCCCcchhhhhhhh---
Q 014151 103 ---GYNSLQ-ISPGQFDE-----------RVFK--ALDHVIVEARKNGVRL---LLSLVNNLQAYGGKTQYVNWAWE--- 159 (430)
Q Consensus 103 ---~~~~~~-~~pg~~de-----------~~l~--~lD~~l~~A~~~Gi~v---il~l~~~w~~~gg~~~y~~W~~~--- 159 (430)
.|..-| ++.-.||+ ..+. ++|-.|..-...+.-+ .....+.|...+++..|.+|..+
T Consensus 99 w~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hl 178 (587)
T COG3934 99 WRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHL 178 (587)
T ss_pred eEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCe
Confidence 021111 11112333 2222 2333333333333311 12233346666778888888753
Q ss_pred --hCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-----ChHHH
Q 014151 160 --EGIGIS------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-----SGDTL 226 (430)
Q Consensus 160 --~G~~~~------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-----~~~~~ 226 (430)
.|.+.. +....++.|-..-..|..|...++.|+.+.+|.+|.+.|++++|...|+++..... ..+..
T Consensus 179 vsvGD~~sp~~~~~pyN~r~~vDya~~hLY~hyd~sl~~r~s~~yg~~~l~i~~~~g~~pV~leefGfsta~g~e~s~ay 258 (587)
T COG3934 179 VSVGDPASPWPQYAPYNARFYVDYAANHLYRHYDTSLVSRVSTVYGKPYLDIPTIMGWQPVNLEEFGFSTAFGQENSPAY 258 (587)
T ss_pred eecCCcCCcccccCCcccceeeccccchhhhhccCChhheeeeeecchhhccchhcccceeeccccCCcccccccccchh
Confidence 132221 11223345555566676777778899999999999999999999999999875431 22445
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEccCCcc-CCCCCCCcccCccchhhccCcch--hhccCCCCcceEEeeecCCCCCC--C
Q 014151 227 QDWIDEMSAFVKSIDKKHLVTVGLEGFY-GPKSPKRLTVNPEMWASALGSDF--IRNSNNDNIDFASVHIYPDHWFH--D 301 (430)
Q Consensus 227 ~~w~~~~~~~Ir~~dp~~lV~~G~~g~~-~~~~~~~~~~np~~w~~~~g~df--~~~~~~~~iD~~s~H~Y~~~w~~--~ 301 (430)
..|..-. +---.-..||-.= .++- +.++ .|..|.. .+..| +++...+.+|+-.+|..+..|.. -
T Consensus 259 fiw~~la---l~~ggdGaLiwcl-sdf~~gsdd------~ey~w~p-~el~fgiIradgpek~~a~~~~~fsn~~kdI~~ 327 (587)
T COG3934 259 FIWIRLA---LDTGGDGALIWCL-SDFHLGSDD------SEYTWGP-MELEFGIIRADGPEKIDAMTLHIFSNNWKDISM 327 (587)
T ss_pred hhhhhhH---HhhcCCceEEEEe-cCCccCCCC------CCCcccc-ccceeeeecCCCchhhhHHHHHHhccccceeee
Confidence 5565441 1111112333221 1111 2121 2333421 11122 22233344555566665554431 0
Q ss_pred cch-----hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 302 LEF-----EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 302 ~~~-----~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
+++ +...---+.++++++..+.+ ..+|+.+.+++..-.. ++.+.-.|+..++++++.-..-+..+++..|
T Consensus 328 ~Sfq~p~~e~~eikp~~~va~~~fv~e~-~~~~Lf~rv~nl~f~~~~~~~gqpt~~rd~d~~~~l~d~kllmipsgpt~g 406 (587)
T COG3934 328 CSFQPPTYEAGEIKPRDYVAQHIFVAER-LNKPLFIRVFNLIFDGRQFTPGQPTTYRDRDYKTMLDDAKLLMIPSGPTAG 406 (587)
T ss_pred ecccCcccccceecchHhhhhceecHhh-hccchhhhcchhHhhhhhhcCCCceEEeccchhhcCCchhheeecCCcccc
Confidence 110 10000112235667667776 8999999999976543 2333445566666544322222223456778
Q ss_pred ceeeeecc
Q 014151 373 ALIWQLFV 380 (430)
Q Consensus 373 ~~~W~~~~ 380 (430)
..+|.+..
T Consensus 407 ~Ttw~~ll 414 (587)
T COG3934 407 VTTWAWLL 414 (587)
T ss_pred hhHHHHHh
Confidence 88887754
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.00025 Score=69.62 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccC
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.++.|.+.+-|++-|++||+.|..
T Consensus 108 ~~rwd~l~~F~~~tG~~liFgLNA 131 (319)
T PF03662_consen 108 MSRWDELNNFAQKTGLKLIFGLNA 131 (319)
T ss_dssp ----HHHHHHHHHHT-EEEEEE-T
T ss_pred hhHHHHHHHHHHHhCCEEEEEecc
Confidence 468899999999999999999853
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.36 Score=47.67 Aligned_cols=205 Identities=17% Similarity=0.261 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCC---CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGG---YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~g 148 (430)
+++.+++.++.+++.|+|+|=+=+=.+.+ ++. .....|.. ......+..+++.++++|||+|--+..+=+..-
T Consensus 11 ~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~-~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~l 89 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAV-KPYIKDLKALVKKLKEHGIYPIARIVVFKDPVL 89 (316)
T ss_pred CHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccc-cccccCHHHHHHHHHHCCCEEEEEEEEecChHH
Confidence 56889999999999999999872222211 210 11111211 122456889999999999999874432211110
Q ss_pred Ccchhhhhhhh--hCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHhccCCcccccccC--CCceeEEeecCCCCCCCCC
Q 014151 149 GKTQYVNWAWE--EGIGISSSNDSFFFD---PSIHKYFKHYVKTVLTRKNTITGVEYRN--DPTIFAWELINEPRCMSDP 221 (430)
Q Consensus 149 g~~~y~~W~~~--~G~~~~~~~~~f~~d---~~~~~~~~~~~~~lv~R~n~~tg~~yk~--~p~I~~wel~NEp~~~~~~ 221 (430)
. ...+.|+.. .|..-......-|.| +++++...+..+++++. .+..++|-. -|.- ...+........
T Consensus 90 a-~~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFdEIqfDYIRFP~~---~~~~~l~y~~~~ 163 (316)
T PF13200_consen 90 A-EAHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKL--GFDEIQFDYIRFPDE---GRLSGLDYSEND 163 (316)
T ss_pred h-hhChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CCCEEEeeeeecCCC---CcccccccCCCC
Confidence 0 112444431 111110111122555 46666667777777665 333333311 1220 000111111000
Q ss_pred ----ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC
Q 014151 222 ----SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 222 ----~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~ 297 (430)
..+.+.++++.+.+.++..+ ..|++-. ||.... ++.. ..-|+++.. -.+.+|++|.-.||.+
T Consensus 164 ~~~~r~~aI~~Fl~~a~~~l~~~~--v~vSaDV---fG~~~~-----~~~~--~~iGQ~~~~--~a~~vD~IsPMiYPSh 229 (316)
T PF13200_consen 164 TEESRVDAITDFLAYAREELHPYG--VPVSADV---FGYVAW-----SPDD--MGIGQDFEK--IAEYVDYISPMIYPSH 229 (316)
T ss_pred CcchHHHHHHHHHHHHHHHHhHcC--CCEEEEe---cccccc-----cCCC--CCcCCCHHH--HhhhCCEEEecccccc
Confidence 23677888888888887664 4455432 221110 0000 124667654 3578999999999999
Q ss_pred CCC
Q 014151 298 WFH 300 (430)
Q Consensus 298 w~~ 300 (430)
|.+
T Consensus 230 ~~~ 232 (316)
T PF13200_consen 230 YGP 232 (316)
T ss_pred cCc
Confidence 875
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.096 Score=53.33 Aligned_cols=203 Identities=17% Similarity=0.277 Sum_probs=110.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCC--CC-cccc----CCCCC-ChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGG--YN-SLQI----SPGQF-DERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~--~~-~~~~----~pg~~-de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
.++.++.+.++.++++|+|+|=+=+..+|. |+ .+.| .||.. -+.+++-|-.+|++|+++||+|+. |-
T Consensus 61 ~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~a-----Wf 135 (418)
T COG1649 61 FQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHA-----WF 135 (418)
T ss_pred ccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeee-----ch
Confidence 478999999999999999998764433331 11 1111 13322 245567788999999999999976 33
Q ss_pred cCCCc--------chhhhhhhhhC-CCCC--CCC--CCCCCC---HHHHHHHHHHHHHHHhccCCcccccccCCCceeEE
Q 014151 146 AYGGK--------TQYVNWAWEEG-IGIS--SSN--DSFFFD---PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW 209 (430)
Q Consensus 146 ~~gg~--------~~y~~W~~~~G-~~~~--~~~--~~f~~d---~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~w 209 (430)
.++.+ ..++.|..... .... ... ..+|-| |++++.+.+.+.++|++- ..-|+++-| ++.
T Consensus 136 ~~~~~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv~evV~~Y-dvDGIQfDd---~fy- 210 (418)
T COG1649 136 NPYRMAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLVVEVVRNY-DVDGIQFDD---YFY- 210 (418)
T ss_pred hhcccCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHHHHHHhCC-CCCceecce---eec-
Confidence 32221 12233332210 0000 111 355655 689999999999999981 112222222 222
Q ss_pred eecCCCCCCCC--------------CCh--------HHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc
Q 014151 210 ELINEPRCMSD--------------PSG--------DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE 267 (430)
Q Consensus 210 el~NEp~~~~~--------------~~~--------~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~ 267 (430)
.-.+-..... .++ +.+.+++++++..||++.|+..+++... +...++...++
T Consensus 211 -~~~~~gy~~~~~~~y~~et~~~~~~~~~~w~~WRr~~i~~~v~~i~~~VKavKp~v~~svsp~---n~~~~~~f~y~-- 284 (418)
T COG1649 211 -YPIPFGYDPDTVTLYRYETGKGPPSNPDQWTDWRRDNITALVAQISQTVKAVKPNVKFSVSPF---NPLGSATFAYD-- 284 (418)
T ss_pred -ccCccccCchHHHHHHhhccCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHhhCCCeEEEEccC---CCCCccceehh--
Confidence 1111111100 012 2334457789999999999999988531 10000000000
Q ss_pred chhhccCcchhhccCCCCcceEEeeecCC
Q 014151 268 MWASALGSDFIRNSNNDNIDFASVHIYPD 296 (430)
Q Consensus 268 ~w~~~~g~df~~~~~~~~iD~~s~H~Y~~ 296 (430)
...+|+..-.....||++-.-.|-.
T Consensus 285 ----~~~qDw~~Wv~~G~iD~l~pqvYr~ 309 (418)
T COG1649 285 ----YFLQDWRRWVRQGLIDELAPQVYRT 309 (418)
T ss_pred ----hhhhhHHHHHHcccHhhhhhhhhcc
Confidence 0112333333467889888888854
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.084 Score=56.99 Aligned_cols=159 Identities=16% Similarity=0.214 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC-CCCcc------ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG-GYNSL------QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g-~~~~~------~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+-.-+.+-|+.++++|+|+|=+-.+.+. +.... +..| .| -..+.|.+++++|+++||+||+++.-+ ..
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~--Gt~~df~~Lv~~aH~rGikVilD~V~N--H~ 251 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDP-QL--GGDAALLRLRHATQQRGMRLVLDGVFN--HT 251 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEECCC--cC
Confidence 5567888899999999999988432211 11000 1111 01 124678999999999999999987532 11
Q ss_pred CCc-------------------chhhhhhhh--hCCCCC----CCCCC-CCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 148 GGK-------------------TQYVNWAWE--EGIGIS----SSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 148 gg~-------------------~~y~~W~~~--~G~~~~----~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
|.. ..|..|..- .|.... ....+ -+.+|++++.+.+-...++.+ |-
T Consensus 252 ~~~~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~~~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~--------Wl 323 (598)
T PRK10785 252 GDSHPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGRALDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRH--------WL 323 (598)
T ss_pred CCCCHHHHHhhccccccccCCCCCcceeeEECCCCCcCCcCCCCcCccccCCCHHHHHHHHhhhhHHHHH--------hh
Confidence 110 011222210 000000 00011 145688877776544445555 44
Q ss_pred CCC-ceeEE--eecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 202 NDP-TIFAW--ELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 202 ~~p-~I~~w--el~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
+.| .|-+| ++.+|-.-.. ....-..+.+++.+.+|+..|+..+ +|
T Consensus 324 ~~~~giDG~RlDva~~v~~~~--~~~~~~~f~~~~~~~vk~~~pd~~l-ig 371 (598)
T PRK10785 324 KAPYNIDGWRLDVVHMLGEGG--GARNNLQHVAGITQAAKEENPEAYV-LG 371 (598)
T ss_pred cCCCCCcEEEEecHhHhcccc--CccccHHHHHHHHHHHHhhCCCeEE-EE
Confidence 432 35455 4455532111 0112346778899999999998654 55
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.047 Score=56.77 Aligned_cols=119 Identities=18% Similarity=0.320 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc---
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK--- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~--- 150 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.
T Consensus 125 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~p~~Yd---WsgY~~L~~mvr~~GLKlq~VmSF--HqCGGNVGD 195 (573)
T PLN00197 125 RRKAMKASLQALKSAGVEGIMMDVW----WGLVERESPGVYN---WGGYNELLEMAKRHGLKVQAVMSF--HQCGGNVGD 195 (573)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEe--cccCCCCCC
Confidence 4678999999999999999987332 444554 789999 888999999999999999665421 123432
Q ss_pred --c-hhhhhhhhhCCCCCCCCCCCCCCH----------------------HHHHHHHHHHHHHHhccCCcccccccC--C
Q 014151 151 --T-QYVNWAWEEGIGISSSNDSFFFDP----------------------SIHKYFKHYVKTVLTRKNTITGVEYRN--D 203 (430)
Q Consensus 151 --~-~y~~W~~~~G~~~~~~~~~f~~d~----------------------~~~~~~~~~~~~lv~R~n~~tg~~yk~--~ 203 (430)
. ..|.|....|. ...+-||+|+ ...+.|.+|.+.+-.. +++ .
T Consensus 196 ~~~IpLP~WV~~~g~---~dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~--------F~~~l~ 264 (573)
T PLN00197 196 SCTIPLPKWVVEEVD---KDPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDN--------FKHLLG 264 (573)
T ss_pred cccccCCHHHHHhhc---cCCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHHHHH--------HHHHhc
Confidence 1 25778865332 1122233321 2357777777777666 433 1
Q ss_pred CceeEEeecC
Q 014151 204 PTIFAWELIN 213 (430)
Q Consensus 204 p~I~~wel~N 213 (430)
..|...+++=
T Consensus 265 ~~I~eI~VGl 274 (573)
T PLN00197 265 DTIVEIQVGM 274 (573)
T ss_pred CceeEEEecc
Confidence 3566666653
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.099 Score=53.95 Aligned_cols=130 Identities=14% Similarity=0.186 Sum_probs=83.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc---
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK--- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~--- 150 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.
T Consensus 115 ~~~al~~~L~~LK~~GVdGVmvDVW----WGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSF--HqCGGNvGd 185 (531)
T PLN02161 115 RLKALTVSLKALKLAGVHGIAVEVW----WGIVERFSPLEFK---WSLYEELFRLISEAGLKLHVALCF--HSNMHLFGG 185 (531)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEee----eeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEe--cccCCCCCC
Confidence 4678999999999999999987332 444554 788999 888999999999999998665421 112221
Q ss_pred c---hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 151 T---QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 151 ~---~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
+ ..|.|....|. ...+-||+|+.- .++. --++|.+-|+|-......-+...
T Consensus 186 ~~~IpLP~WV~~~g~---~~pDi~ftDr~G----------------------~rn~-EyLSlg~D~~pvl~GRTplq~Y~ 239 (531)
T PLN02161 186 KGGISLPLWIREIGD---VNKDIYYRDKNG----------------------FSNN-DYLTLGVDQLPLFGGRTAVQCYE 239 (531)
T ss_pred ccCccCCHHHHhhhc---cCCCceEEcCCC----------------------Cccc-ceeeeecccchhcCCCCHHHHHH
Confidence 0 25778866443 344567887421 1222 34579999999875432123444
Q ss_pred HHHHHHHHHHHh
Q 014151 228 DWIDEMSAFVKS 239 (430)
Q Consensus 228 ~w~~~~~~~Ir~ 239 (430)
+|++......+.
T Consensus 240 Dfm~SFr~~F~~ 251 (531)
T PLN02161 240 DFMLSFSTKFEP 251 (531)
T ss_pred HHHHHHHHHHHH
Confidence 555444444333
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.31 Score=52.81 Aligned_cols=167 Identities=8% Similarity=0.104 Sum_probs=86.1
Q ss_pred HHHHHHH-HHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 76 RARVGAM-LQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 76 ~~~~~~~-~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
...+.+. ++.++++|+|+|=+-...+ ..| .. +.+.+ .|. ..+.|.++|++|.++||+||+++.-+..
T Consensus 155 ~~~i~~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~-~~G--t~~dlk~lV~~~H~~Gi~VilD~V~NH~ 231 (613)
T TIGR01515 155 YRELADQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTS-RFG--TPDDFMYFVDACHQAGIGVILDWVPGHF 231 (613)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEecccCc
Confidence 4444455 5999999999999843221 111 11 11111 222 1457899999999999999999753211
Q ss_pred cCC--Ccchh---hhhhhhh---CCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCC
Q 014151 146 AYG--GKTQY---VNWAWEE---GIGISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216 (430)
Q Consensus 146 ~~g--g~~~y---~~W~~~~---G~~~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~ 216 (430)
... +...+ +.|.... +........+ -+.+|++++.+.+.++..++. =-+-|.++---+.++-++-.+++.
T Consensus 232 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~e-y~iDG~R~D~v~~~~~~~~~~~~~ 310 (613)
T TIGR01515 232 PKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEF-YHIDGLRVDAVASMLYLDYSRDEG 310 (613)
T ss_pred CCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHH-hCCcEEEEcCHHHhhhhccccccc
Confidence 000 00000 0010000 0000000011 135789999999999988876 012232221112344333333332
Q ss_pred C-----CCCCChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 217 C-----MSDPSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 217 ~-----~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
. ........-..+++++.+.||+..|+.++
T Consensus 311 ~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~l 345 (613)
T TIGR01515 311 EWSPNEDGGRENLEAVDFLRKLNQTVYEAFPGVVT 345 (613)
T ss_pred cccccccCCcCChHHHHHHHHHHHHHHHHCCCeEE
Confidence 1 00000123457889999999999998644
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.097 Score=54.98 Aligned_cols=130 Identities=15% Similarity=0.269 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc---
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK--- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~--- 150 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|+.|| |..+.++++.+++.||||.+.+.- +..||.
T Consensus 266 ~~~al~a~L~aLK~aGVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlqvVmSF--HqCGGNVGD 336 (681)
T PLN02705 266 DPEGVRQELSHMKSLNVDGVVVDCW----WGIVEGWNPQKYV---WSGYRELFNIIREFKLKLQVVMAF--HEYGGNASG 336 (681)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeEeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEe--eccCCCCCC
Confidence 5688999999999999999987332 444554 688999 888999999999999998665421 123432
Q ss_pred --c-hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 151 --T-QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 151 --~-~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
. ..|.|+...|. ...+-||+|+.- .++.. -++|-+-++|-......-+...
T Consensus 337 ~~~IPLP~WV~e~g~---~nPDifftDr~G----------------------~rn~E-yLSlg~D~~pvl~GRTplq~Y~ 390 (681)
T PLN02705 337 NVMISLPQWVLEIGK---DNQDIFFTDREG----------------------RRNTE-CLSWSIDKERVLKGRTGIEVYF 390 (681)
T ss_pred cccccCCHHHHHhcc---cCCCceeecCCC----------------------Ccccc-eeeeecCcccccCCCCHHHHHH
Confidence 1 25678876543 334567887421 12233 4469999999764432224455
Q ss_pred HHHHHHHHHHHh
Q 014151 228 DWIDEMSAFVKS 239 (430)
Q Consensus 228 ~w~~~~~~~Ir~ 239 (430)
+|++......+.
T Consensus 391 DFM~SFr~~F~~ 402 (681)
T PLN02705 391 DFMRSFRSEFDD 402 (681)
T ss_pred HHHHHHHHHHHH
Confidence 555554444444
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.11 Score=53.67 Aligned_cols=130 Identities=15% Similarity=0.258 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc---
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK--- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~--- 150 (430)
+...++..|+.+|++|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.
T Consensus 35 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSF--HqCGGNVGD 105 (517)
T PLN02801 35 DEEGLEKQLKRLKEAGVDGVMVDVW----WGIVESKGPKQYD---WSAYRSLFELVQSFGLKIQAIMSF--HQCGGNVGD 105 (517)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEe--cccCCCCCC
Confidence 4678999999999999999987332 444554 689999 888999999999999999665421 123433
Q ss_pred --c-hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 151 --T-QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 151 --~-~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
. ..|.|+...|. ...+-||+|+.- .++ +--++|.+-|+|-......-+...
T Consensus 106 ~~~IpLP~WV~~~g~---~~pDi~ftDr~G----------------------~rn-~EyLSlg~D~~pvl~GRTplq~Y~ 159 (517)
T PLN02801 106 AVNIPIPQWVRDVGD---SDPDIFYTNRSG----------------------NRN-KEYLSIGVDNLPLFHGRTAVEMYS 159 (517)
T ss_pred cccccCCHHHHHhhc---cCCCceeecCCC----------------------CcC-cceeeeccCcccccCCCCHHHHHH
Confidence 1 14678876443 344567887421 122 334578999999875432124455
Q ss_pred HHHHHHHHHHHh
Q 014151 228 DWIDEMSAFVKS 239 (430)
Q Consensus 228 ~w~~~~~~~Ir~ 239 (430)
+|++........
T Consensus 160 Dfm~SFr~~F~~ 171 (517)
T PLN02801 160 DYMKSFRENMAD 171 (517)
T ss_pred HHHHHHHHHHHH
Confidence 555555544444
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.034 Score=47.78 Aligned_cols=107 Identities=12% Similarity=0.279 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCC---C-ccc-cCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGY---N-SLQ-ISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~---~-~~~-~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
++.++.+++.|+|+|-+++-+.++| | .+. ..|+. . .+.|-+++++|+++||+|++-+.-.|+.. -...+|
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L-~---~Dllge~v~a~h~~Girv~ay~~~~~d~~-~~~~HP 77 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGL-K---RDLLGEQVEACHERGIRVPAYFDFSWDED-AAERHP 77 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCC-C---cCHHHHHHHHHHHCCCEEEEEEeeecChH-HHHhCC
Confidence 5677889999999999976544432 2 111 12321 1 46788999999999999999765545432 124567
Q ss_pred hhhhh--hCCCCCC---CCCCCC---CCHHHHHHHHHHHHHHHhc
Q 014151 155 NWAWE--EGIGISS---SNDSFF---FDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 155 ~W~~~--~G~~~~~---~~~~f~---~d~~~~~~~~~~~~~lv~R 191 (430)
.|..- .|.+... ....++ -|..+++...+.++++++|
T Consensus 78 eW~~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~ 122 (132)
T PF14871_consen 78 EWFVRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDR 122 (132)
T ss_pred ceeeECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHc
Confidence 88753 2332110 011122 2346778999999999999
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.11 Score=54.83 Aligned_cols=130 Identities=15% Similarity=0.269 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc--
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT-- 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~-- 151 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.-
T Consensus 284 ~~~al~a~L~aLK~aGVdGVmvDVW----WGiVE~~gP~~Yd---WsgY~~L~~mvr~~GLKlqvVMSF--HqCGGNVGD 354 (702)
T PLN02905 284 DPDGLLKQLRILKSINVDGVKVDCW----WGIVEAHAPQEYN---WNGYKRLFQMVRELKLKLQVVMSF--HECGGNVGD 354 (702)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEe--cccCCCCCC
Confidence 5678999999999999999987332 444554 688999 888999999999999999665431 1234431
Q ss_pred ----hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 152 ----QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 152 ----~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
..|.|....|. ...+-||+|+.- .++... ++|-+-|+|-......-+...
T Consensus 355 ~~~IPLP~WV~e~g~---~nPDifftDrsG----------------------~rn~Ey-LSlg~D~~pvl~GRTplq~Y~ 408 (702)
T PLN02905 355 DVCIPLPHWVAEIGR---SNPDIFFTDREG----------------------RRNPEC-LSWGIDKERILRGRTALEVYF 408 (702)
T ss_pred cccccCCHHHHHhhh---cCCCceEecCCC----------------------CccCce-eeeecccccccCCCCHHHHHH
Confidence 25678765442 334568887421 123334 459999999765432224445
Q ss_pred HHHHHHHHHHHh
Q 014151 228 DWIDEMSAFVKS 239 (430)
Q Consensus 228 ~w~~~~~~~Ir~ 239 (430)
+|++......+.
T Consensus 409 DFM~SFr~~F~~ 420 (702)
T PLN02905 409 DYMRSFRVEFDE 420 (702)
T ss_pred HHHHHHHHHHHH
Confidence 555544444444
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.4 Score=52.17 Aligned_cols=163 Identities=9% Similarity=0.105 Sum_probs=82.6
Q ss_pred HHHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc----
Q 014151 79 VGAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ---- 145 (430)
Q Consensus 79 ~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~---- 145 (430)
+++.|+.++++|+|+|=+-...+ +.| .. +.+.| .|. ..+.|.++|++|+++||+||+++.-+..
T Consensus 173 ~~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~-~~G--t~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~ 249 (633)
T PRK12313 173 ADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTS-RYG--TPEDFMYLVDALHQNGIGVILDWVPGHFPKDD 249 (633)
T ss_pred HHHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCC-CCC--CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCc
Confidence 44446999999999999744311 111 11 11111 222 2567899999999999999999753211
Q ss_pred ----cCCCcchhhhhhhh-hCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEee-------c
Q 014151 146 ----AYGGKTQYVNWAWE-EGIGISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL-------I 212 (430)
Q Consensus 146 ----~~gg~~~y~~W~~~-~G~~~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel-------~ 212 (430)
.+.|.+.|. +... .+....-...+ -+.+|++++.+.+.++..++. =-+-|.++---++++..+- .
T Consensus 250 ~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~-~~iDG~R~D~~~~~~~~d~~~~~~~~~ 327 (633)
T PRK12313 250 DGLAYFDGTPLYE-YQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDE-YHLDGLRVDAVSNMLYLDYDEEGEWTP 327 (633)
T ss_pred ccccccCCCccee-ecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHH-hCCcEEEEcChhhhhhcccccccCcCC
Confidence 010100000 0000 00000000011 146789999988888888875 0122222211111211111 1
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 213 NEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 213 NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+... ..+. ....+++++.+.||+..|+. +++|.
T Consensus 328 ~~~~~--~~~~-~~~~fl~~~~~~v~~~~p~~-~liaE 361 (633)
T PRK12313 328 NKYGG--RENL-EAIYFLQKLNEVVYLEHPDV-LMIAE 361 (633)
T ss_pred cccCC--CCCc-HHHHHHHHHHHHHHHHCCCe-EEEEE
Confidence 11111 0111 23568899999999999985 55554
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.11 Score=53.99 Aligned_cols=130 Identities=17% Similarity=0.242 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc--
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT-- 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~-- 151 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.-
T Consensus 105 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSF--HqCGGNVGD 175 (548)
T PLN02803 105 KPRAMNASLMALRSAGVEGVMVDAW----WGLVEKDGPMKYN---WEGYAELVQMVQKHGLKLQVVMSF--HQCGGNVGD 175 (548)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEee----eeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEe--cccCCCCCC
Confidence 4678999999999999999887332 444554 589999 888999999999999999665421 1234431
Q ss_pred ----hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 152 ----QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 152 ----~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
..|.|....|. .+.+-||+|+.- .++. --+++.+-|+|-......-+...
T Consensus 176 ~~~IpLP~WV~e~~~---~~pDi~ftDr~G----------------------~rn~-EyLSlg~D~~pvl~GRTplq~Y~ 229 (548)
T PLN02803 176 SCSIPLPPWVLEEMS---KNPDLVYTDRSG----------------------RRNP-EYISLGCDSLPVLRGRTPIQVYS 229 (548)
T ss_pred cccccCCHHHHHhhh---cCCCceEecCCC----------------------Cccc-ceeccccccchhccCCCHHHHHH
Confidence 25678765442 334567887421 1222 34568888998875432124455
Q ss_pred HHHHHHHHHHHh
Q 014151 228 DWIDEMSAFVKS 239 (430)
Q Consensus 228 ~w~~~~~~~Ir~ 239 (430)
+|++......+.
T Consensus 230 Dfm~SFr~~F~~ 241 (548)
T PLN02803 230 DYMRSFRERFKD 241 (548)
T ss_pred HHHHHHHHHHHH
Confidence 555544444444
|
|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.39 Score=53.09 Aligned_cols=167 Identities=14% Similarity=0.200 Sum_probs=83.2
Q ss_pred HHHH-HHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc-
Q 014151 77 ARVG-AMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ- 145 (430)
Q Consensus 77 ~~~~-~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~- 145 (430)
..+. +.++.++++|+|+|=+-...+ ..| .. +.+.| .|. ..+.|.++|++|.++||+||+++.-+..
T Consensus 265 ~~i~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~-~~G--t~~dfk~lV~~~H~~Gi~VilD~V~NH~~ 341 (726)
T PRK05402 265 RELADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTS-RFG--TPDDFRYFVDACHQAGIGVILDWVPAHFP 341 (726)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCc-ccC--CHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 3444 446999999999999844321 111 10 11222 121 2567899999999999999999753211
Q ss_pred --c-----CCCcchhh--hhhhhhCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecC-C
Q 014151 146 --A-----YGGKTQYV--NWAWEEGIGISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN-E 214 (430)
Q Consensus 146 --~-----~gg~~~y~--~W~~~~G~~~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~N-E 214 (430)
. +.|.+.|. .+. .|....-.... =+.+|++++.+.+.++..+++ =-+-|.++---..++-++-.. +
T Consensus 342 ~~~~~~~~~~~~~~y~~~~~~--~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e-~~iDG~R~D~v~~~~~~~~~~~~ 418 (726)
T PRK05402 342 KDAHGLARFDGTALYEHADPR--EGEHPDWGTLIFNYGRNEVRNFLVANALYWLEE-FHIDGLRVDAVASMLYLDYSRKE 418 (726)
T ss_pred CCccchhccCCCcceeccCCc--CCccCCCCCccccCCCHHHHHHHHHHHHHHHHH-hCCcEEEECCHHHhhhccccccc
Confidence 0 11111010 000 00000000001 156789999999888888876 011222121001111111110 0
Q ss_pred ----CCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 215 ----PRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 215 ----p~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+............+++++.+.||+..|+.+ ++|.
T Consensus 419 g~~~~~~~~~~~~~~~~~fl~~~~~~~~~~~p~~~-liaE 457 (726)
T PRK05402 419 GEWIPNIYGGRENLEAIDFLRELNAVVHEEFPGAL-TIAE 457 (726)
T ss_pred cccccccccCcCCHHHHHHHHHHHHHHHHHCCCeE-EEEE
Confidence 1100000112345688999999999999865 4443
|
|
| >COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.2 Score=50.94 Aligned_cols=177 Identities=18% Similarity=0.248 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHcCCCEEEEcccc--CC-CCC----ccccCCCCC------ChHHHHHHHHHHHHHHHcCCEEEEeccCCc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFN--DG-GYN----SLQISPGQF------DERVFKALDHVIVEARKNGVRLLLSLVNNL 144 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~--~g-~~~----~~~~~pg~~------de~~l~~lD~~l~~A~~~Gi~vil~l~~~w 144 (430)
.-.+.++.+|++-+-++|...-+ ++ .|. +.+..|-++ .|..-=...+++++|++.|..+.+.+.-.
T Consensus 50 ~RkDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt~EF~~~~e~iGaep~~avN~G- 128 (501)
T COG3534 50 FRKDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWGTTETNEFGTHEFMDWCELIGAEPYIAVNLG- 128 (501)
T ss_pred hHHHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhcccccccccccccHHHHHHHHHHhCCceEEEEecC-
Confidence 44556888999999999985422 21 231 112233222 24444467899999999999999887431
Q ss_pred ccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCC---CC
Q 014151 145 QAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCM---SD 220 (430)
Q Consensus 145 ~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~---~~ 220 (430)
++|.+.-..|..--- .+....|.| +|. ++ =+..| .|-.|.|+||-..+ ..
T Consensus 129 --srgvd~ar~~vEY~n----~pggtywsd----------lR~--~~--------G~~~P~nvK~w~lGNEm~GpWq~G~ 182 (501)
T COG3534 129 --SRGVDEARNWVEYCN----HPGGTYWSD----------LRR--EN--------GREEPWNVKYWGLGNEMDGPWQCGH 182 (501)
T ss_pred --CccHHHHHHHHHHcc----CCCCChhHH----------HHH--hc--------CCCCCcccceEEeccccCCCccccc
Confidence 244443344443100 111122222 111 11 12234 78889999997433 11
Q ss_pred CChHHHHHHHHHHHHHHHhcCCC-CEEEEccCCccCCCCCCCcccCc--cchhhccCcchhhccCCCCcceEEeeecCC
Q 014151 221 PSGDTLQDWIDEMSAFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNP--EMWASALGSDFIRNSNNDNIDFASVHIYPD 296 (430)
Q Consensus 221 ~~~~~~~~w~~~~~~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np--~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~ 296 (430)
...+..-.++++..++.|=.||. -.+.+|+.+- + |+ ..|... ....+...+|++|+|+|-.
T Consensus 183 ~~a~EY~~~A~e~~k~~k~~d~t~e~~v~g~a~~---~-------n~~~~~W~~~-----vl~~~~e~vD~ISlH~Y~G 246 (501)
T COG3534 183 KTAPEYGRLANEYRKYMKYFDPTIENVVCGSANG---A-------NPTDPNWEAV-----VLEEAYERVDYISLHYYKG 246 (501)
T ss_pred ccCHHHHHHHHHHHHHHhhcCccccceEEeecCC---C-------CCCchHHHHH-----HHHHHhhhcCeEEEEEecC
Confidence 23455666888888999999996 4666665321 1 22 145421 1223456799999999954
|
|
| >PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.039 Score=51.88 Aligned_cols=58 Identities=28% Similarity=0.372 Sum_probs=33.9
Q ss_pred HHHHHHHHhccCCcccccccCC---CceeEEeecCCCCCCC----C--C---ChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 182 KHYVKTVLTRKNTITGVEYRND---PTIFAWELINEPRCMS----D--P---SGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 182 ~~~~~~lv~R~n~~tg~~yk~~---p~I~~wel~NEp~~~~----~--~---~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
.+++..|+++ |+.. -.|-.|.|-|||..-. + + ..+.+..=.-+++++||++||+..|+
T Consensus 107 ~ewV~~l~~~--------~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~a~v~ 176 (239)
T PF12891_consen 107 DEWVNYLVNK--------YGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPDAKVF 176 (239)
T ss_dssp HHHHHHHHHH--------H--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TTSEEE
T ss_pred HHHHHHHHHH--------HhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEe
Confidence 4556666776 5543 2577899999998521 1 1 22444444567889999999998875
|
; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A .... |
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.37 Score=47.37 Aligned_cols=162 Identities=10% Similarity=0.100 Sum_probs=92.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCC----CCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~g 148 (430)
+++.+.+.+.++.|+..|+|.+-++. .|. +.+.+-...|.|. -+.+.++++.|+++||.||+.+-. +|
T Consensus 13 ~~~~~~lk~~id~ma~~k~N~l~lhl-~D~f~~~~~p~~~~~~~~yT---~~ei~ei~~yA~~~gI~vIPeid~----pG 84 (301)
T cd06565 13 VPKVSYLKKLLRLLALLGANGLLLYY-EDTFPYEGEPEVGRMRGAYT---KEEIREIDDYAAELGIEVIPLIQT----LG 84 (301)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEE-ecceecCCCcccccCCCCcC---HHHHHHHHHHHHHcCCEEEecCCC----HH
Confidence 35678999999999999999999865 331 1222222346676 456788999999999999997632 22
Q ss_pred CcchhhhhhhhhCC-CCC-CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC---CCCCh
Q 014151 149 GKTQYVNWAWEEGI-GIS-SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM---SDPSG 223 (430)
Q Consensus 149 g~~~y~~W~~~~G~-~~~-~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~---~~~~~ 223 (430)
=+.....|..-... ... ....--.++|++.+..++.+++++.-. +-.=++.+.|.. ++++--+.+. .....
T Consensus 85 H~~~~l~~~~~~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f-~s~~~HIG~DE~---~~~g~~~~~~~~~~~~~~ 160 (301)
T cd06565 85 HLEFILKHPEFRHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELH-PSKYIHIGMDEA---YDLGRGRSLRKHGNLGRG 160 (301)
T ss_pred HHHHHHhCcccccccccCCCCCccCCCChhHHHHHHHHHHHHHHhC-CCCeEEECCCcc---cccCCCHHHHHhcCCCHH
Confidence 11111111100000 000 112223567899999999999998871 111122222221 1111111100 00123
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 224 DTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 224 ~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+.+..+++++++.+|+..+. ++.
T Consensus 161 ~l~~~~~~~v~~~v~~~g~~-~~~ 183 (301)
T cd06565 161 ELYLEHLKKVLKIIKKRGPK-PMM 183 (301)
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEE
Confidence 56788999999999998873 443
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.95 Score=49.21 Aligned_cols=163 Identities=9% Similarity=0.123 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC---cc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN---LQ 145 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~---w~ 145 (430)
..++.++.++++|+|+|-+-...+ +.| .. +.+.+ .|. ..+.|.++|++|.++||+||+++.-+ ++
T Consensus 169 ~~~~l~~ylk~lG~t~velmPv~e~~~~~~wGY~~~~~~~~~~-~~g--~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~ 245 (639)
T PRK14706 169 LAHRLGEYVTYMGYTHVELLGVMEHPFDGSWGYQVTGYYAPTS-RLG--TPEDFKYLVNHLHGLGIGVILDWVPGHFPTD 245 (639)
T ss_pred HHHHHHHHHHHcCCCEEEccchhcCCCCCCCCcCccccccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEecccccCcc
Confidence 444556899999999999844322 112 10 11111 221 25778999999999999999986432 11
Q ss_pred c-----CCCcchh--hhhhhhhCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEe------e
Q 014151 146 A-----YGGKTQY--VNWAWEEGIGISSSNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE------L 211 (430)
Q Consensus 146 ~-----~gg~~~y--~~W~~~~G~~~~~~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~we------l 211 (430)
. +-|.+.| ..+. .|....-....| +.++++++.+.+-++.-++.. -+-|.++-.-.+++-++ +
T Consensus 246 ~~~l~~~dg~~~y~~~~~~--~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~-~iDG~R~Dav~~~ly~d~~~~~~~ 322 (639)
T PRK14706 246 ESGLAHFDGGPLYEYADPR--KGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDF-HVDGLRVDAVASMLYLDFSRTEWV 322 (639)
T ss_pred hhhhhccCCCcceeccCCc--CCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHh-CCCeEEEeeehheeecccCccccc
Confidence 0 0011101 0000 010000000011 357899999888888888640 12333332112332222 2
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 212 INEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 212 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
.|+..... ......+++++...||+..|+.+ +++.
T Consensus 323 ~~~~gg~~---n~~a~~fl~~ln~~v~~~~p~~~-~iAE 357 (639)
T PRK14706 323 PNIHGGRE---NLEAIAFLKRLNEVTHHMAPGCM-MIAE 357 (639)
T ss_pred ccccCCcc---cHHHHHHHHHHHHHHHHhCCCeE-EEEE
Confidence 23222211 13445688999999999999854 4443
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.78 Score=48.94 Aligned_cols=153 Identities=14% Similarity=0.181 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC----CC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG----GY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNL 144 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w 144 (430)
.+-.-+.+.|+.++++|+|+|-+-...+. .| .. +.+.+ .|. ..+.|.++|++|+++||+||+++.-+
T Consensus 108 G~~~gi~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~-~~G--~~~e~k~lV~~aH~~Gi~VilD~V~N- 183 (542)
T TIGR02402 108 GTFDAAIEKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHN-AYG--GPDDLKALVDAAHGLGLGVILDVVYN- 183 (542)
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCcccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEEccC-
Confidence 35566777899999999999998543210 11 11 11121 222 25678999999999999999997532
Q ss_pred ccCC--C--cchhhhhhhhhCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHhccCCcccccccCCCceeEEee--cCCC
Q 014151 145 QAYG--G--KTQYVNWAWEEGIGISSSNDSFFFDP---SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL--INEP 215 (430)
Q Consensus 145 ~~~g--g--~~~y~~W~~~~G~~~~~~~~~f~~d~---~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel--~NEp 215 (430)
..+ + .+.+..|........-+. .-=+.++ .+++.+.+.++..++. |+ |-+|=+ ....
T Consensus 184 -H~~~~~~~~~~~~~y~~~~~~~~wg~-~~n~~~~~~~~vr~~i~~~~~~W~~e--------~~----iDGfR~D~~~~~ 249 (542)
T TIGR02402 184 -HFGPEGNYLPRYAPYFTDRYSTPWGA-AINFDGPGSDEVRRYILDNALYWLRE--------YH----FDGLRLDAVHAI 249 (542)
T ss_pred -CCCCccccccccCccccCCCCCCCCC-ccccCCCcHHHHHHHHHHHHHHHHHH--------hC----CcEEEEeCHHHh
Confidence 111 1 111111221100000000 0113455 7888888878777765 43 323322 2111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcCCC--CEEEEcc
Q 014151 216 RCMSDPSGDTLQDWIDEMSAFVKSIDKK--HLVTVGL 250 (430)
Q Consensus 216 ~~~~~~~~~~~~~w~~~~~~~Ir~~dp~--~lV~~G~ 250 (430)
.- ..-..+++++.+.+|++.|+ +.+.+|.
T Consensus 250 ~~------~~~~~~l~~~~~~~~~~~p~~~~~~li~E 280 (542)
T TIGR02402 250 AD------TSAKHILEELAREVHELAAELRPVHLIAE 280 (542)
T ss_pred cc------ccHHHHHHHHHHHHHHHCCCCceEEEEEe
Confidence 10 01246788999999999887 2555654
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=1.6 Score=48.02 Aligned_cols=166 Identities=10% Similarity=0.163 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-cc--
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN-LQ-- 145 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~-w~-- 145 (430)
..++.+..++++|+|+|=+-...+ ..| .+ +.+.| .|. ..+.|.++|++|.++||+||+++.-+ -.
T Consensus 271 la~~ll~ylk~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~-~~G--~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d 347 (730)
T PRK12568 271 LAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTA-RHG--SPDGFAQFVDACHRAGIGVILDWVSAHFPDD 347 (730)
T ss_pred HHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCCCcCCccCc-ccC--CHHHHHHHHHHHHHCCCEEEEEeccccCCcc
Confidence 445568999999999999854321 112 11 11222 121 25678999999999999999987532 11
Q ss_pred -----cCCCcchhhhhhhhhCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEee--------
Q 014151 146 -----AYGGKTQYVNWAWEEGIGISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL-------- 211 (430)
Q Consensus 146 -----~~gg~~~y~~W~~~~G~~~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel-------- 211 (430)
.+.|...|..--...|....-.... =|.+|++++.+.+-++.-++. --+-|.++-.-.+++-.+-
T Consensus 348 ~~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~e-yhIDG~R~DAva~mly~d~~r~~g~w~ 426 (730)
T PRK12568 348 AHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEH-YHLDGLRVDAVASMLYRDYGRAEGEWV 426 (730)
T ss_pred ccccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHH-hCceEEEEcCHhHhhhhcccccccccc
Confidence 0111111100000000000000001 156788988888888888765 1122322211122332221
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccC
Q 014151 212 INEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLE 251 (430)
Q Consensus 212 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~ 251 (430)
-|+-.... .-....+++++.+.||+..|+.++ ++.+
T Consensus 427 pn~~gg~e---n~ea~~Fl~~ln~~v~~~~P~~~~-IAEe 462 (730)
T PRK12568 427 PNAHGGRE---NLEAVAFLRQLNREIASQFPGVLT-IAEE 462 (730)
T ss_pred ccccCCcc---ChHHHHHHHHHHHHHHHHCCCeEE-EEEc
Confidence 12211110 113457899999999999998654 4443
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.88 Score=44.79 Aligned_cols=148 Identities=13% Similarity=0.175 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCC-------Cccc---------cCCCCCChHHHHHHHHHHHHHHHcCCEEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGY-------NSLQ---------ISPGQFDERVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~-------~~~~---------~~pg~~de~~l~~lD~~l~~A~~~Gi~vi 137 (430)
.+.+.+++.++.|+..++|++.++.-.+-+| |.+. +..|.|. -+.+.++++.|+++||.||
T Consensus 13 ~~~~~lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT---~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 13 LSVESIKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYT---YAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred cCHHHHHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeEC---HHHHHHHHHHHHHcCCEEE
Confidence 4678999999999999999999866433223 2221 1123455 3567899999999999999
Q ss_pred EeccCCcccCCCcch----hhhhhhh--hCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEe
Q 014151 138 LSLVNNLQAYGGKTQ----YVNWAWE--EGIGIS-SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE 210 (430)
Q Consensus 138 l~l~~~w~~~gg~~~----y~~W~~~--~G~~~~-~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~we 210 (430)
+.+.. +|-... |+.-... .+.... ....--.++|++.+..++.+++++.- +. .+.| -
T Consensus 90 PEiD~----PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~l--------f~-~~~i---H 153 (303)
T cd02742 90 PEIDM----PGHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAEL--------FP-DRYL---H 153 (303)
T ss_pred Eeccc----hHHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHh--------CC-CCeE---E
Confidence 97632 121111 1110000 000000 01112246788999999999999887 42 2222 1
Q ss_pred e-cCCCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 014151 211 L-INEPRCMSDPSGDTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 211 l-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d 241 (430)
+ +-|..... ...+.+..+++++.+.+++..
T Consensus 154 iGgDE~~~~~-~~~~l~~~f~~~~~~~v~~~g 184 (303)
T cd02742 154 IGGDEAHFKQ-DRKHLMSQFIQRVLDIVKKKG 184 (303)
T ss_pred ecceecCCCC-CHHHHHHHHHHHHHHHHHHcC
Confidence 1 22221111 123556788999999999876
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=1.5 Score=50.86 Aligned_cols=166 Identities=13% Similarity=0.188 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-cc--
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN-LQ-- 145 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~-w~-- 145 (430)
..++.++.+|++|+|+|=+-...+ +.| .. +.+. ..|. ..+.|.++|++|.++||+||+++.-+ ..
T Consensus 767 l~~~lldYlk~LGvt~IeLmPv~e~p~~~swGY~~~~y~ap~-~ryG--t~~dfk~lVd~~H~~GI~VILD~V~nH~~~d 843 (1224)
T PRK14705 767 LAKELVDYVKWLGFTHVEFMPVAEHPFGGSWGYQVTSYFAPT-SRFG--HPDEFRFLVDSLHQAGIGVLLDWVPAHFPKD 843 (1224)
T ss_pred HHHHHHHHHHHhCCCEEEECccccCCCCCCCCCCccccCCcC-cccC--CHHHHHHHHHHHHHCCCEEEEEeccccCCcc
Confidence 345568999999999999854321 112 11 1111 1232 25678999999999999999996532 10
Q ss_pred -----cCCCcchhh--hhhhhhCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecC----
Q 014151 146 -----AYGGKTQYV--NWAWEEGIGISSSNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN---- 213 (430)
Q Consensus 146 -----~~gg~~~y~--~W~~~~G~~~~~~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~N---- 213 (430)
.+.|...|- +.. .|....-....| |.++++++.+.+-++..+++ =-+-|.++---.+++-.+-.-
T Consensus 844 ~~~l~~fdg~~~y~~~d~~--~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~e-yhiDGfR~Dav~~mly~Dysr~~g~ 920 (1224)
T PRK14705 844 SWALAQFDGQPLYEHADPA--LGEHPDWGTLIFDFGRTEVRNFLVANALYWLDE-FHIDGLRVDAVASMLYLDYSREEGQ 920 (1224)
T ss_pred hhhhhhcCCCcccccCCcc--cCCCCCCCCceecCCCHHHHHHHHHHHHHHHHH-hCCCcEEEeehhhhhhccccccccc
Confidence 011110000 000 000000000111 56788999998888888877 011222221112222112111
Q ss_pred -CCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 214 -EPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 214 -Ep~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
.|+............+++++.+.|++..|+.+ +++.
T Consensus 921 w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~-~IAE 957 (1224)
T PRK14705 921 WRPNRFGGRENLEAISFLQEVNATVYKTHPGAV-MIAE 957 (1224)
T ss_pred ccccccCCccChHHHHHHHHHHHHHHHHCCCeE-EEEE
Confidence 12222111112346789999999999988754 4444
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.15 Score=45.70 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC-----CCCccccCC-CCCCh--HHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG-----GYNSLQISP-GQFDE--RVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g-----~~~~~~~~p-g~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+-..+.+.++.++++|+|+|-+-...+. .+....+.. -..++ -..+.|.+++++|+++||+||+++.-
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 5677888899999999999998443211 010111000 00111 13578999999999999999999864
|
|
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=94.47 E-value=1.6 Score=43.33 Aligned_cols=147 Identities=14% Similarity=0.220 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccc--------------------cCCCCCChHHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQ--------------------ISPGQFDERVFKALDHVI 126 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~--------------------~~pg~~de~~l~~lD~~l 126 (430)
.+.+.+++.++.|+..++|++-++. +|+ |+ .+. ...+.|. -+.+.+++
T Consensus 14 ~~~~~ik~~id~ma~~K~N~lhlHl-tD~-~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT---~~di~eiv 88 (326)
T cd06564 14 YSMDFLKDIIKTMSWYKMNDLQLHL-NDN-LIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYT---KEEFKELI 88 (326)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEee-cCC-cccccCCCchhhhhhhhhccccccccccCCCCCCCCccc---HHHHHHHH
Confidence 4578999999999999999999855 442 21 110 0123344 45788999
Q ss_pred HHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC
Q 014151 127 VEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGI----SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202 (430)
Q Consensus 127 ~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~----~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~ 202 (430)
+.|+++||.||+.+.. +|-......+....+... .....--.++|++.+..++.+++++.- +..
T Consensus 89 ~yA~~rgI~vIPEID~----PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~--------f~~ 156 (326)
T cd06564 89 AYAKDRGVNIIPEIDS----PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDG--------FNP 156 (326)
T ss_pred HHHHHcCCeEeccCCC----cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHh--------cCC
Confidence 9999999999987632 221111111110011100 011112246789999999999999987 432
Q ss_pred -CCceeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 014151 203 -DPTIFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 203 -~p~I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d 241 (430)
.+.| -+ +-|.... ....+.+..|++++.+.|++.+
T Consensus 157 ~~~~~---HiGgDE~~~~-~~~~~~~~~f~~~~~~~v~~~g 193 (326)
T cd06564 157 KSDTV---HIGADEYAGD-AGYAEAFRAYVNDLAKYVKDKG 193 (326)
T ss_pred CCCEE---Eecccccccc-CccHHHHHHHHHHHHHHHHHcC
Confidence 2222 11 1121110 1124677889999999999874
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=93.71 E-value=2.4 Score=46.75 Aligned_cols=168 Identities=11% Similarity=0.191 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-ccc-
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN-LQA- 146 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~-w~~- 146 (430)
.+++.|..++++|+|+|=+-...+ +.| .. +.+.+ .|. ..+.|.++|++|.++||+||+++..+ -..
T Consensus 252 ~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~~-~~G--tp~dlk~LVd~aH~~GI~VilDvV~nH~~~~ 328 (758)
T PLN02447 252 FADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVSS-RSG--TPEDLKYLIDKAHSLGLRVLMDVVHSHASKN 328 (758)
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCccccc-ccC--CHHHHHHHHHHHHHCCCEEEEEecccccccc
Confidence 356789999999999999844321 111 10 11111 121 24678899999999999999997532 100
Q ss_pred C-CCcchh----hhhhhhh--CCCCCCCCCCC-CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEE------eec
Q 014151 147 Y-GGKTQY----VNWAWEE--GIGISSSNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW------ELI 212 (430)
Q Consensus 147 ~-gg~~~y----~~W~~~~--G~~~~~~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~w------el~ 212 (430)
. .|...+ ..|.... |.........| |.++++++.+.+-++..++. =-+-|.++-.-.+++-. +..
T Consensus 329 ~~~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~e-y~IDGfRfDaV~smlY~~hg~~~~f~ 407 (758)
T PLN02447 329 TLDGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEE-YKFDGFRFDGVTSMLYHHHGLQMAFT 407 (758)
T ss_pred ccccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHH-hCcccccccchhhhhccccCcccccc
Confidence 0 010000 0111110 00000000011 45688988888888888875 01233333222333211 111
Q ss_pred -CCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 213 -NEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 213 -NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|...............+++.+...|++..|+.+ +++.
T Consensus 408 ~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~~-~IAE 445 (758)
T PLN02447 408 GNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAV-TIAE 445 (758)
T ss_pred cCcccccCCccChHHHHHHHHHHHHHHHhCCCeE-EEEE
Confidence 111111111123446788899999999999864 4444
|
|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=93.39 E-value=3.3 Score=46.19 Aligned_cols=165 Identities=11% Similarity=0.181 Sum_probs=87.8
Q ss_pred CHHHH-HHHHHHHHHcCCCEEEEccccC----CCC--Cc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARV-GAMLQAGAKMGLTVCRTWAFND----GGY--NS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~-~~~~~~~~~~G~n~vR~~~~~~----g~~--~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+...+ ++.|..++++|+|+|=+-...+ ..| .. +.+. ..|.. .+.|.++|++|.++||+||+++.-+
T Consensus 414 tf~~~~e~~LdYLk~LGvt~IeLmPv~e~~~~~swGY~~~~yfa~~-~~yGt--p~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGYNAIQLIGVQEHKDYSSVGYKVTNFFAVS-SRFGT--PDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcc-cccCC--HHHHHHHHHHHHHCCCEEEEEecccc
Confidence 44444 5679999999999999854321 111 11 1111 12321 4678999999999999999997432
Q ss_pred cc--------cCCCcc-hhhhhhhhhCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEe--e
Q 014151 144 LQ--------AYGGKT-QYVNWAWEEGIGISSSNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE--L 211 (430)
Q Consensus 144 w~--------~~gg~~-~y~~W~~~~G~~~~~~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~we--l 211 (430)
-. .+.|.+ .|-. ....|....-....| |.++++++.+.+-++..++. =-+-|.++-.-.+++-.+ .
T Consensus 491 ~~~d~~~~L~~FDG~~~~Yf~-~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~E-yhIDGfR~DAV~sMlY~d~g~ 568 (897)
T PLN02960 491 AAADEMVGLSLFDGSNDCYFH-SGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTE-YRVDGFQFHSLGSMLYTHNGF 568 (897)
T ss_pred cCCccccchhhcCCCccceee-cCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHH-HCCCceeecccceeeeeccCc
Confidence 10 011110 0000 000000000000111 46788999999888888865 123344343333443222 1
Q ss_pred cCCC-------CCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 212 INEP-------RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 212 ~NEp-------~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
.+++ +... ......+++++...|++..|+.++.
T Consensus 569 ~~~~G~~~~~~n~~~---d~~Ai~fL~~lN~~v~~~~P~vilI 608 (897)
T PLN02960 569 ASFTGDLDEYCNQYV---DRDALIYLILANEMLHQLHPNIITI 608 (897)
T ss_pred cccCCcccccCCccC---CchHHHHHHHHHHHHHhhCCCeEEE
Confidence 1111 1111 1345678899999999988876443
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.38 E-value=2.5 Score=42.39 Aligned_cols=144 Identities=14% Similarity=0.148 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCC----hHHHHHHHHHHHHHHHcCCEEEEeccC-CcccC
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFD----ERVFKALDHVIVEARKNGVRLLLSLVN-NLQAY 147 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~d----e~~l~~lD~~l~~A~~~Gi~vil~l~~-~w~~~ 147 (430)
.-..++.++.++++|++-+=+-. +.|| -|+.-. ..|+ ....+-+.+++++|+++||++-+.++. .|...
T Consensus 90 ~fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~---t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~dw~~~ 166 (346)
T PF01120_consen 90 KFDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKY---TDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWDWHHP 166 (346)
T ss_dssp T--HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT----SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSSCCCT
T ss_pred cCCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCC---CcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchHhcCc
Confidence 34567888999999999766522 1222 132110 1122 233567889999999999999997654 23211
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCC-CCCHH-HHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHH
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSF-FFDPS-IHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDT 225 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f-~~d~~-~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~ 225 (430)
. |..-. .+.. ...... -..++ ..+.+...+++|++| | +|.++=+|....... ..
T Consensus 167 ~----~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~ql~EL~~~--------Y--~~d~lWfDg~~~~~~------~~ 222 (346)
T PF01120_consen 167 D----YPPDE--EGDE--NGPADGPGNWQRYYNEYWLAQLRELLTR--------Y--KPDILWFDGGWPDPD------ED 222 (346)
T ss_dssp T----TTSSC--HCHH--CC--HCCHHHHHHHHHHHHHHHHHHHHC--------S--TESEEEEESTTSCCC------TH
T ss_pred c----cCCCc--cCCc--ccccccchhhHhHhhhhhHHHHHHHHhC--------C--CcceEEecCCCCccc------cc
Confidence 0 00000 0000 000000 00012 344777899999999 9 788887888776421 11
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEE
Q 014151 226 LQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 226 ~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
+. ..++.+.||+..|+.+|..
T Consensus 223 ~~--~~~~~~~i~~~qp~~ii~~ 243 (346)
T PF01120_consen 223 WD--SAELYNWIRKLQPDVIINN 243 (346)
T ss_dssp HH--HHHHHHHHHHHSTTSEEEC
T ss_pred cC--HHHHHHHHHHhCCeEEEec
Confidence 21 2788888999999888864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.77 Score=46.31 Aligned_cols=231 Identities=14% Similarity=0.173 Sum_probs=119.9
Q ss_pred HHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCC
Q 014151 85 AGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGI 164 (430)
Q Consensus 85 ~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~ 164 (430)
.-++.|+|-||.+.. |+-.... -.|+ +..+|++++.-...|+-.|.... .|+...-..+ .|..+
T Consensus 13 ~~~Ei~v~yi~~~~v----~h~~~q~-~~~~---~t~~d~i~d~~~~~~~~~ie~~l-~~~~l~~~~~--~wq~n----- 76 (428)
T COG3664 13 TDDEIQVNYIRRHGV----WHVNAQK-LFYP---FTYIDEIIDTLLDLGLDLIELFL-IWNNLNTKEH--QWQLN----- 76 (428)
T ss_pred hhhhhceeeehhcce----eeeeecc-ccCC---hHHHHHHHHHHHHhccHHHHHhh-cccchhhhhh--hcccc-----
Confidence 346889999987543 2211111 1234 56788888888888854443322 2443211111 23211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC-CceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 014151 165 SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND-PTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKK 243 (430)
Q Consensus 165 ~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~ 243 (430)
-..+...+++++.++++++.| |+-. -+...++..|||+...+ ...+-+-+..+ .|+.+|.
T Consensus 77 ------~~~~~~~~dl~~~fl~h~~~~--------vg~e~v~kw~f~~~~~pn~~ad--~~eyfk~y~~~---a~~~~p~ 137 (428)
T COG3664 77 ------VDDPKSVFDLIAAFLKHVIRR--------VGVEFVRKWPFYSPNEPNLLAD--KQEYFKLYDAT---ARQRAPS 137 (428)
T ss_pred ------cCCcHhHHHHHHHHHHHHHHH--------hChhheeecceeecCCCCcccc--hHHHHHHHHhh---hhccCcc
Confidence 011224889999999999999 6532 35667899999998643 22222222333 3456665
Q ss_pred CEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCC---CCCcchhh-------hHHHHHH
Q 014151 244 HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHW---FHDLEFED-------DLKFVTK 313 (430)
Q Consensus 244 ~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w---~~~~~~~~-------~~~~~~~ 313 (430)
-.| |. .+. +. .-..|.+ ..+.+||++.|.|...- ......+. .++ ..+
T Consensus 138 i~v--g~--~w~----------~e-----~l~~~~k--~~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~-~~r 195 (428)
T COG3664 138 IQV--GG--SWN----------TE-----RLHEFLK--KADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLE-DLR 195 (428)
T ss_pred eee--cc--ccC----------cH-----HHhhhhh--ccCcccceeecccccccccccCCCchhhhhhhhhhhhh-HHH
Confidence 333 31 121 10 0011222 35789999999996321 11000000 001 112
Q ss_pred HHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHH--HHHHHHHHHhcCCCcccceeeeecc
Q 014151 314 WMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKT--ILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 314 ~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~--~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
.+.+.++... .|+|+++.||-....+.. ..-..|++. +...+.+ .++.+.+.-+|.+.+
T Consensus 196 ~~~d~i~~~~--~~~pl~~~~wntlt~~~~---~~n~sy~raa~i~~~Lr~---~g~~v~a~~yW~~sd 256 (428)
T COG3664 196 GLKDLIQHHS--LGLPLLLTNWNTLTGPRE---PTNGSYVRAAYIMRLLRE---AGSPVDAFGYWTNSD 256 (428)
T ss_pred HHHHHHHhcc--CCCcceeecccccCCCcc---ccCceeehHHHHHHHHHh---cCChhhhhhhhhccc
Confidence 2334444333 699999999998876421 111233331 1122222 245678888998876
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=93.17 E-value=3.3 Score=44.22 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC-----CCCccccCCCCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG-----GYNSLQISPGQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g-----~~~~~~~~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+-.-+.+.|+.++++|+|+|=+-.+... +|... .--..++ -..+.+.+++++|+++||+||+++.
T Consensus 25 Gdl~gi~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~--dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~V 97 (539)
T TIGR02456 25 GDFPGLTSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVS--DYRAILPEFGTIDDFKDFVDEAHARGMRVIIDLV 97 (539)
T ss_pred cCHHHHHHhHHHHHHCCCCEEEECCCcCCCCCCCCCCcc--cccccChhhCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 35677888899999999999987433211 01000 0001122 1247899999999999999999875
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas | Back alignment and domain information |
|---|
Probab=92.98 E-value=4.8 Score=38.30 Aligned_cols=93 Identities=19% Similarity=0.178 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 120 KALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
..++.++..|+++|++|++.+.. |.. + .......+++.++.|.+-+..++++
T Consensus 46 ~~~~~~~~~~~~~~~kvl~sigg-~~~-~------------------~~~~~~~~~~~r~~fi~~lv~~~~~-------- 97 (253)
T cd06545 46 SELNSVVNAAHAHNVKILISLAG-GSP-P------------------EFTAALNDPAKRKALVDKIINYVVS-------- 97 (253)
T ss_pred HHHHHHHHHHHhCCCEEEEEEcC-CCC-C------------------cchhhhcCHHHHHHHHHHHHHHHHH--------
Confidence 45678899999999999998743 210 0 0011345788888888888888887
Q ss_pred ccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+=+---+-||-.... .+.+..+++++.+.+++. +.++++.
T Consensus 98 ~~~DGIdiDwE~~~~~-------~~~~~~fv~~Lr~~l~~~--~~~lt~a 138 (253)
T cd06545 98 YNLDGIDVDLEGPDVT-------FGDYLVFIRALYAALKKE--GKLLTAA 138 (253)
T ss_pred hCCCceeEEeeccCcc-------HhHHHHHHHHHHHHHhhc--CcEEEEE
Confidence 6555445556543211 356788889988888753 3455554
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.27 Score=47.46 Aligned_cols=64 Identities=16% Similarity=0.332 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCC--CCccc------cCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGG--YNSLQ------ISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~--~~~~~------~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
-.-+.+.|+.++++|+|+|-+-...+.. +.... ..| .| -..+.|.+++++|+++||+||+++.-
T Consensus 3 ~~gi~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~--Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 3 FRGIIDKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDP-RF--GTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp HHHHHHTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEEST-TT--BHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHhhHHHHHcCCCceecccccccccccccccceeeecccc-cc--chhhhhhhhhhccccccceEEEeeec
Confidence 3456777999999999999984432211 11111 111 12 23678999999999999999998753
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=92.50 E-value=2.4 Score=45.98 Aligned_cols=143 Identities=16% Similarity=0.248 Sum_probs=76.7
Q ss_pred HHHHHHHHcCCCEEEEccccCC------------CC--Cc---cccCCCCCC------hHHHHHHHHHHHHHHHcCCEEE
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDG------------GY--NS---LQISPGQFD------ERVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g------------~~--~~---~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vi 137 (430)
+-|+.++++|+|+|=+-...+- .| .+ +.++ +.|. ....+.|.++|++|+++||+||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~-~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vi 246 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPE-GSYSTNPYDPATRIRELKQMIQALHENGIRVI 246 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcC-hhhhcCCCccchHHHHHHHHHHHHHHCCCEEE
Confidence 4599999999999998432210 01 10 0111 0111 1125789999999999999999
Q ss_pred EeccCCcccCCC--cchh----hhhh---hhhCCCCC--CCCCCC-CCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 138 LSLVNNLQAYGG--KTQY----VNWA---WEEGIGIS--SSNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 138 l~l~~~w~~~gg--~~~y----~~W~---~~~G~~~~--~~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
+++.-+ ..++ ...+ +.|. ...|.... .-..++ ..+|.+++.+.+.++..++. |+=|-
T Consensus 247 lDvV~N--H~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e--------~~iDG- 315 (605)
T TIGR02104 247 MDVVYN--HTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKE--------YNIDG- 315 (605)
T ss_pred EEEEcC--CccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHH--------cCCCE-
Confidence 986432 1110 0000 1111 00010000 001112 34688888888888888876 53221
Q ss_pred eeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 206 IFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 206 I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
+ =+++..... ..+++++.+.+|+.+|+..+
T Consensus 316 f-R~D~~~~~~----------~~~~~~~~~~~~~~~p~~~l 345 (605)
T TIGR02104 316 F-RFDLMGIHD----------IETMNEIRKALNKIDPNILL 345 (605)
T ss_pred E-EEechhcCC----------HHHHHHHHHHHHhhCCCeEE
Confidence 1 134443211 23567788888998887544
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.91 Score=46.47 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=53.0
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc--c-ccCCCCCChHHHHHHHH
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS--L-QISPGQFDERVFKALDH 124 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~--~-~~~pg~~de~~l~~lD~ 124 (430)
+|..+.+-|+|- -.... .-...+.+.++.++++|+++|=+....+. +|.+ + ...+ .|. ..+.|..
T Consensus 9 ~~~~v~lQ~F~W--~~~~~---~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~-~~G--t~~el~~ 80 (401)
T PLN02361 9 NGREILLQAFNW--ESHKH---DWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNS-AYG--SEHLLKS 80 (401)
T ss_pred CCCcEEEEEEec--cCCcc---HHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCc-ccC--CHHHHHH
Confidence 567788889982 21111 02467888899999999999988543221 0110 0 0011 111 2467899
Q ss_pred HHHHHHHcCCEEEEecc
Q 014151 125 VIVEARKNGVRLLLSLV 141 (430)
Q Consensus 125 ~l~~A~~~Gi~vil~l~ 141 (430)
+|++|+++||+||+++.
T Consensus 81 li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 81 LLRKMKQYNVRAMADIV 97 (401)
T ss_pred HHHHHHHcCCEEEEEEc
Confidence 99999999999999864
|
|
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=90.99 E-value=9.9 Score=38.28 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCC-------Ccccc----C-----------------CCCCChHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGY-------NSLQI----S-----------------PGQFDERVFKALDHV 125 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~-------~~~~~----~-----------------pg~~de~~l~~lD~~ 125 (430)
.+.+.+.+.++.|+..++|++.+++..+-+| |.+.. . .|.|. .+.+.++
T Consensus 15 ~~~~~ik~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT---~~di~ei 91 (357)
T cd06563 15 FPVDEVKRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYT---QEEIREI 91 (357)
T ss_pred cCHHHHHHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceEC---HHHHHHH
Confidence 4578999999999999999999876433233 22210 0 12343 5678899
Q ss_pred HHHHHHcCCEEEEeccCCcccCCCcc----hhhhhhhhhCCCC------C-CCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 126 IVEARKNGVRLLLSLVNNLQAYGGKT----QYVNWAWEEGIGI------S-SSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 126 l~~A~~~Gi~vil~l~~~w~~~gg~~----~y~~W~~~~G~~~------~-~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
++.|+++||.||+.+.. +|-.. .|+..... +... . ....--..+|++.+..++.++++++-
T Consensus 92 v~yA~~rgI~VIPEID~----PGH~~a~l~~~pel~~~-~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~l 163 (357)
T cd06563 92 VAYAAERGITVIPEIDM----PGHALAALAAYPELGCT-GGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAEL 163 (357)
T ss_pred HHHHHHcCCEEEEecCC----chhHHHHHHhCccccCC-CCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 99999999999997632 12111 11111100 0000 0 01111245788989999999998886
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.97 E-value=9.3 Score=37.11 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+++++|++.++.++..|++++=+ -|..+-.+ .|... --.|-+.++.|.+.||+|++.|.
T Consensus 35 ~~~~qWq~~~~~~~~~G~~tLiv------QWt~yG~~--~fg~~-~g~La~~l~~A~~~Gl~v~vGL~ 93 (296)
T PRK09936 35 VTDTQWQGLWSQLRLQGFDTLVV------QWTRYGDA--DFGGQ-RGWLAKRLAAAQQAGLKLVVGLY 93 (296)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEE------EeeeccCC--Ccccc-hHHHHHHHHHHHHcCCEEEEccc
Confidence 56899999999999999998876 12222111 12111 23577899999999999999885
|
|
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=90.96 E-value=7 Score=38.94 Aligned_cols=149 Identities=15% Similarity=0.202 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCC-------Ccccc----------CCCCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGY-------NSLQI----------SPGQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~-------~~~~~----------~pg~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
.+.+.+.+.++.|+..++|++-+++-.+-+| |.+.. ..|.|. -+.+.++++.|+++||.|
T Consensus 15 ~~~~~lk~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT---~~di~elv~yA~~rgI~v 91 (329)
T cd06568 15 FTVAEVKRYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYT---QEDYKDIVAYAAERHITV 91 (329)
T ss_pred cCHHHHHHHHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCC---HHHHHHHHHHHHHcCCEE
Confidence 4678999999999999999999876433233 22211 012354 456889999999999999
Q ss_pred EEeccCCcccCCCcc----hhhhhhhhhCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 137 LLSLVNNLQAYGGKT----QYVNWAWEEGIGIS-------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 137 il~l~~~w~~~gg~~----~y~~W~~~~G~~~~-------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
|+.+.- +|-.. .|+.-.+ .+.... ....--.++|++.+..++.+++++.- +. .+.
T Consensus 92 IPEiD~----PGH~~a~~~~~p~l~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~--------f~-~~~ 157 (329)
T cd06568 92 VPEIDM----PGHTNAALAAYPELNC-DGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAAL--------TP-GPY 157 (329)
T ss_pred EEecCC----cHHHHHHHHhChhhcc-CCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHh--------CC-CCe
Confidence 997632 12111 1221111 110000 00112246788999999999999876 53 333
Q ss_pred eeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 206 IFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 206 I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
| -+ +-|.... ..+.+..+++++++.+++.. .+++
T Consensus 158 i---HiGgDE~~~~---~~~~~~~f~~~~~~~v~~~G-k~~~ 192 (329)
T cd06568 158 I---HIGGDEAHST---PHDDYAYFVNRVRAIVAKYG-KTPV 192 (329)
T ss_pred E---EEecccCCCC---chHHHHHHHHHHHHHHHHCC-CeEE
Confidence 2 23 3444322 23567788999999998765 3444
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.68 E-value=11 Score=35.45 Aligned_cols=70 Identities=19% Similarity=0.278 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
+..++-+.+.+.+|++.||+.|- |. |.+.|-. -.|++.++.|.+-++..++-
T Consensus 92 ~~aleiM~KaI~LA~dLGIRtIQ-LA-------GYDVYYE----------------~~d~eT~~rFi~g~~~a~~l---- 143 (287)
T COG3623 92 QQALEIMEKAIQLAQDLGIRTIQ-LA-------GYDVYYE----------------EADEETRQRFIEGLKWAVEL---- 143 (287)
T ss_pred HHHHHHHHHHHHHHHHhCceeEe-ec-------cceeeec----------------cCCHHHHHHHHHHHHHHHHH----
Confidence 56888999999999999999973 22 2222211 13788899998877776653
Q ss_pred ccccccCCCceeEEeecCCCCC
Q 014151 196 TGVEYRNDPTIFAWELINEPRC 217 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~ 217 (430)
=......++.|++.-|..
T Consensus 144 ----A~~aqV~lAvEiMDtpfm 161 (287)
T COG3623 144 ----AARAQVMLAVEIMDTPFM 161 (287)
T ss_pred ----HHhhccEEEeeecccHHH
Confidence 222346788999987764
|
|
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=90.67 E-value=13 Score=37.44 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccccCCC------CCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQISPG------QFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~~~pg------~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.+.+.+++.++.|+...+|++.++.-.+-+|+ .+. ..| .|. -+.+..+++.|+++||.||+.+
T Consensus 15 ~~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt-~~ga~~~~~~YT---~~di~eiv~yA~~rgI~vIPEI 90 (348)
T cd06562 15 LSVDSIKRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELS-KKGAYSPSEVYT---PEDVKEIVEYARLRGIRVIPEI 90 (348)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhh-hccCcCCCceEC---HHHHHHHHHHHHHcCCEEEEec
Confidence 45789999999999999999998664332342 221 112 344 4678899999999999999976
Q ss_pred cCCcccCCCcc----hhhhhhhhh-------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 141 VNNLQAYGGKT----QYVNWAWEE-------GIGISSSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 141 ~~~w~~~gg~~----~y~~W~~~~-------G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
.. +|-.. .|+.-.... +... ....--.++|++.+..++.++++++-
T Consensus 91 D~----PGH~~a~~~~~p~l~~~~~~~~~~~~~~~-~~~~L~~~~~~t~~fl~~vl~E~~~l 147 (348)
T cd06562 91 DT----PGHTGSWGQGYPELLTGCYAVWRKYCPEP-PCGQLNPTNPKTYDFLKTLFKEVSEL 147 (348)
T ss_pred cC----chhhHHHHHhChhhhCCCCccccccccCC-CCccccCCChhHHHHHHHHHHHHHHh
Confidence 32 11111 111100000 0000 00111235788988899999998886
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=90.15 E-value=3.8 Score=42.37 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
....+.+.+..++++|+++|=+....+. +|.+ +...+..|. ..+.|.+++++|+++||+||++..
T Consensus 42 ~~~~i~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fG--t~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 42 WYNFLMGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYG--NEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCC--CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3566889999999999999887443221 1110 111111221 235789999999999999999864
|
|
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=89.48 E-value=9.2 Score=38.99 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCC----hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFD----ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK 150 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~d----e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~ 150 (430)
..++..+.+|++|++-|=+-. +-|| -|+.-. ..|+ .-..+-+.++.++|+++||++-+.+.. |+.+ .
T Consensus 82 D~~~Wa~~~k~AGakY~vlTaKHHDGF~lw~S~~---t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~Y~S~-~DW~--~ 155 (384)
T smart00812 82 DPEEWADLFKKAGAKYVVLTAKHHDGFCLWDSKY---SNWNAVDTGPKRDLVGELADAVRKRGLKFGLYHSL-FDWF--N 155 (384)
T ss_pred CHHHHHHHHHHcCCCeEEeeeeecCCccccCCCC---CCCcccCCCCCcchHHHHHHHHHHcCCeEEEEcCH-HHhC--C
Confidence 456778889999999776522 1122 122100 0111 013467889999999999999885432 2211 0
Q ss_pred chhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHH-
Q 014151 151 TQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDW- 229 (430)
Q Consensus 151 ~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w- 229 (430)
+.|.. . .........+....++.+.+...+++|+++ |+. .++=+|...+-.. . .|
T Consensus 156 p~y~~---~--~~~~~~~~~~~~~~~y~~~~~~Ql~ELit~--------Ygp--d~lWfD~~~~~~~------~---~~~ 211 (384)
T smart00812 156 PLYAG---P--TSSDEDPDNWPRFQEFVDDWLPQLRELVTR--------YKP--DLLWFDGGWEAPD------D---YWR 211 (384)
T ss_pred Ccccc---c--cccccccccchhHHHHHHHHHHHHHHHHhc--------CCC--ceEEEeCCCCCcc------c---hhc
Confidence 11110 0 000000111111223333348899999999 965 6665676543111 1 12
Q ss_pred HHHHHHHHHhcCCCC
Q 014151 230 IDEMSAFVKSIDKKH 244 (430)
Q Consensus 230 ~~~~~~~Ir~~dp~~ 244 (430)
..++.+.||++.|+.
T Consensus 212 ~~~l~~~~~~~qP~~ 226 (384)
T smart00812 212 SKEFLAWLYNLSPVK 226 (384)
T ss_pred HHHHHHHHHHhCCCC
Confidence 467888899999987
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=89.35 E-value=9.9 Score=37.58 Aligned_cols=65 Identities=25% Similarity=0.289 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCC-------Cccc-c-CC-CCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGY-------NSLQ-I-SP-GQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~-------~~~~-~-~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+.+.+.+.++.|+..++|++-+++-.+-+| |.+. . ++ +.|. -+.+.++++.|+++||.||+.+.
T Consensus 15 ~~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT---~~di~elv~yA~~rgI~vIPEId 89 (311)
T cd06570 15 IPVAVIKRQLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKASDGLYYT---QEQIREVVAYARDRGIRVVPEID 89 (311)
T ss_pred cCHHHHHHHHHHHHHhCCeEEEEEEecCCCceeecCCCccccccCCCCCccC---HHHHHHHHHHHHHcCCEEEEeec
Confidence 3578999999999999999999876433334 2221 1 11 2455 45678999999999999999763
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
Probab=89.30 E-value=12 Score=37.07 Aligned_cols=71 Identities=17% Similarity=0.328 Sum_probs=50.8
Q ss_pred CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 172 FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 172 ~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+.+++.++.+.++++.++++ .|.|+-. | ++-+|+..+|.........+.+.++++++++.+|+..|+.+|.
T Consensus 140 ~~~~~W~~il~~rl~~l~~k--GfDGvfL-D--~lDsy~~~~~~~~~~~~~~~~m~~~i~~Ia~~ar~~~P~~~II 210 (315)
T TIGR01370 140 YWDPEWKAIAFSYLDRVIAQ--GFDGVYL-D--LIDAFEYWAENGDNRPGAAAEMIAFVCEIAAYARAQNPQFVII 210 (315)
T ss_pred cccHHHHHHHHHHHHHHHHc--CCCeEee-c--cchhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34678888888888888776 5666533 3 5677887777553222234678889999999999999996664
|
Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. |
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=89.17 E-value=0.52 Score=47.74 Aligned_cols=104 Identities=17% Similarity=0.386 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEec--cCCcccCCCc--
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSL--VNNLQAYGGK-- 150 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l--~~~w~~~gg~-- 150 (430)
...++..|+.+|++|+.-|=+-+. |-.+|. .|++|| |..++++++.+++.|||+.+.+ |. .||.
T Consensus 15 ~~~~~~~L~~LK~~GV~GVmvdvW----WGiVE~~~p~~yd---Ws~Y~~l~~~vr~~GLk~~~vmsfH~----cGgNvg 83 (402)
T PF01373_consen 15 WNALEAQLRALKSAGVDGVMVDVW----WGIVEGEGPQQYD---WSGYRELFEMVRDAGLKLQVVMSFHQ----CGGNVG 83 (402)
T ss_dssp CHHHHHHHHHHHHTTEEEEEEEEE----HHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-----BSSSTT
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEeeec----CCCCCC
Confidence 358999999999999999887332 334555 488998 8889999999999999996654 43 2332
Q ss_pred ---c-hhhhhhhhhCC--CC--C---CC-C----CCCCCCHHHHHHHHHHHHHHHhc
Q 014151 151 ---T-QYVNWAWEEGI--GI--S---SS-N----DSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 151 ---~-~y~~W~~~~G~--~~--~---~~-~----~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
. ..|.|..+.|. .+ + +. . .-.+.... .+.|.++.+.+.++
T Consensus 84 D~~~IpLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt-~~~Y~dfm~sF~~~ 139 (402)
T PF01373_consen 84 DDCNIPLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRT-LQCYSDFMRSFRDN 139 (402)
T ss_dssp SSSEB-S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBC-HHHHHHHHHHHHHH
T ss_pred CccCCcCCHHHHhccccCCcEEECCCCCcCcceeecccCCch-HHHHHHHHHHHHHH
Confidence 1 24678754211 10 0 00 0 01123333 78888888888877
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.16 E-value=17 Score=36.66 Aligned_cols=173 Identities=21% Similarity=0.286 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHhccCCcccccccCCCceeEEee--cCCCCCCCCC---------ChHHHHHHHHH-HHHHHHhcCC-
Q 014151 176 SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL--INEPRCMSDP---------SGDTLQDWIDE-MSAFVKSIDK- 242 (430)
Q Consensus 176 ~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel--~NEp~~~~~~---------~~~~~~~w~~~-~~~~Ir~~dp- 242 (430)
.+-+.+.+|+-++.+. |..+ .|..|.| .|||....+. .++..+++++. +..++++-..
T Consensus 226 ~yhqtya~YfvkFlea--------Y~~~-gi~FWglt~qNEPstG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa~s~~~ 296 (518)
T KOG2566|consen 226 IYHQTYARYFVKFLEA--------YAKH-GIQFWGLTTQNEPSTGSDKKWKWQTLGFTAETQRDFIKKDLGPALASSKTT 296 (518)
T ss_pred hhHHHHHHHHHHHHHH--------HHhc-CceEEeecccCCCCcCcccCCceeecccCHHHHHHHHHHhcchhhhcCCcC
Confidence 4566677777777777 7766 4555766 8999876542 24556666553 4444444322
Q ss_pred -CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHh
Q 014151 243 -KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIED 321 (430)
Q Consensus 243 -~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~ 321 (430)
+.-|.+=.++ + .|-..|+..- +....+.+.++=+.+|.|.+...+. .++..
T Consensus 297 knvkllilDD~--------R--g~LP~Wadtv---lnDpeAakYv~GIaVHwY~df~~pa---------------~~L~e 348 (518)
T KOG2566|consen 297 KNVKLLILDDQ--------R--GLLPHWADTV---LNDPEAAKYVHGIAVHWYQDFLEPA---------------KHLDE 348 (518)
T ss_pred CceEEEEecCC--------c--cCCCccchhh---ccChhhhhhccceEEEeeccccChh---------------hhhhh
Confidence 2223321111 1 1212566421 1111244677778999998742221 11222
Q ss_pred hh-hcCCCcEEEEecCCCCCCC---CCChhHH-HHHHHHHHHHHHHHHhcCCCcccceeeeeccCC--CccCCCCce
Q 014151 322 GD-KELNKPVFFTEYGLSNLIK---GFEPSLR-DKLYKTILDIVYKSAKRKRSGAGALIWQLFVEG--MEEYNDDFG 391 (430)
Q Consensus 322 a~-~~~gkPv~v~EfG~~~~~~---~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~--~~~~~dg~~ 391 (430)
.. +-.++=++-+|-.+..... .+..=.| .+|-.+++..+.. =+.||.=|.+.-+. =+.|-++|.
T Consensus 349 Th~~hP~~fifgTEAc~Gy~~~d~v~~Gswdrae~yasdii~dlnn------~vtGWtdwNl~Ld~~GGP~wv~nfv 419 (518)
T KOG2566|consen 349 THRKHPNTFIFGTEACAGYKSKDGVDLGSWDRAEQYASDIITDLNN------HVTGWTDWNLILDAQGGPNWVSNFV 419 (518)
T ss_pred HHhhCCCeEEEeehhccccccccCccccchhhHHHHHHHHHHhhhh------hccceeeeeeEecCcCCchhHhccC
Confidence 22 1245556677765544321 1111123 3444445444432 27899999997553 367877775
|
|
| >PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3 | Back alignment and domain information |
|---|
Probab=89.06 E-value=1.8 Score=43.26 Aligned_cols=153 Identities=16% Similarity=0.212 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccccCCC---------CCChHHHHHHHHHHHHHHHcCCEEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQISPG---------QFDERVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~~~pg---------~~de~~l~~lD~~l~~A~~~Gi~vi 137 (430)
.+.+.+++.++.|+..++|++-++.-.+-+|+ .+. ..| .|. -+.+.++++.|+++||.||
T Consensus 15 ~~~~~ik~~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~-~~ga~~~~~~~~~yT---~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 15 FSVDTIKRLIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELT-EKGAYRPSDAGGYYT---KEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp B-HHHHHHHHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHH-HTTTESTTCTESEBE---HHHHHHHHHHHHHTT-EEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEecCCCCccccCCCcccc-ccCccccccccccCC---HHHHHHHHHHHHHcCCcee
Confidence 46789999999999999999998764432332 111 112 343 3678899999999999999
Q ss_pred EeccCCcccCCCcchhhhhhhhhCCC---C--------CCC---CCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC
Q 014151 138 LSLVNNLQAYGGKTQYVNWAWEEGIG---I--------SSS---NDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND 203 (430)
Q Consensus 138 l~l~~~w~~~gg~~~y~~W~~~~G~~---~--------~~~---~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~ 203 (430)
+.+.. +|-+.....+....+.. . ... ..-..++|++.+..++.+++++.- +. .
T Consensus 91 Peid~----PGH~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~--------f~-~ 157 (351)
T PF00728_consen 91 PEIDT----PGHAEAWLKAYPELGCSAWPEDKSWPNSTCWYPDNGVLDPSNPETYEFLKDLLDEVADL--------FP-S 157 (351)
T ss_dssp EEEEE----SSS-HHHHHHHHHHCCCHTTCSSSCEEEETTSEEEEEE-TTSHHHHHHHHHHHHHHHHH--------HT-S
T ss_pred eeccC----chHHHHHHHhCchhhccccccccccccccccCCCcccCCCCcHHHHHHHHHHHHHHHhh--------CC-C
Confidence 97632 22222111111111110 0 000 011246789999999999999987 54 3
Q ss_pred CceeEEee-cCCCCCCCCC---------------C-hHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 204 PTIFAWEL-INEPRCMSDP---------------S-GDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 204 p~I~~wel-~NEp~~~~~~---------------~-~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+.| -+ +-|....... . .+.+..+++++.+.+++.... ++.
T Consensus 158 ~~i---HiGgDEv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~v~~~g~~-~~~ 214 (351)
T PF00728_consen 158 KYI---HIGGDEVNYNCWNNSPECQAWMKQNGLTDPNDLFQYFVNRLADIVKKHGKK-PII 214 (351)
T ss_dssp SEE---EEE-TSTTTHHHHCHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTTSE-EEE
T ss_pred CeE---EeCCcccccccccCCHHHhhHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-EEE
Confidence 332 23 3444311000 0 123445678899989987666 444
|
2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C .... |
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
Probab=88.98 E-value=1.9 Score=50.23 Aligned_cols=102 Identities=12% Similarity=0.165 Sum_probs=64.3
Q ss_pred CCCCcEEEeCCeEEECC-eEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEcccc-CCC----CC---cc
Q 014151 37 PEMGFVTRNGTHFMLDG-KALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN-DGG----YN---SL 107 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~~G-~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~-~g~----~~---~~ 107 (430)
++.+++.|. -.+.+|| +.+.+.|++..-.-..... ....|++.|+.++++|+|+|-+-.+- .|. |. -+
T Consensus 94 ~~~~y~~V~-P~L~i~~~~~lPl~~i~iqTvlsK~mG--~~~~w~~~L~~ik~lGyN~IhftPI~~~G~SnS~Ysi~Dyl 170 (1464)
T TIGR01531 94 TGGGYFVVL-PMLYINADKFLPLDSIALQTVLAKLLG--PLSEWEPRLRVAKEKGYNMIHFTPLQELGGSNSCYSLYDQL 170 (1464)
T ss_pred CCceEEEeC-CeeEECCCcccCcCceeeeeehhhhcC--CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCccccchh
Confidence 344555554 7788888 8787888885322111111 35789999999999999999984432 221 10 01
Q ss_pred ccCCCCCC-hHHHHHHHHHHHHHHHc-CCEEEEecc
Q 014151 108 QISPGQFD-ERVFKALDHVIVEARKN-GVRLLLSLV 141 (430)
Q Consensus 108 ~~~pg~~d-e~~l~~lD~~l~~A~~~-Gi~vil~l~ 141 (430)
+..|--+. +...+.+.++++.|++. ||++|++..
T Consensus 171 ~idP~~~~~~~~~~d~~~lV~~~h~~~Gm~~ilDvV 206 (1464)
T TIGR01531 171 QLNQHFKSQKDGKNDVQALVEKLHRDWNVLSITDIV 206 (1464)
T ss_pred hcChhhcccCCcHHHHHHHHHHHHHhcCCEEEEEee
Confidence 11221110 12457789999999985 999999864
|
glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground. |
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=88.97 E-value=1.8 Score=42.93 Aligned_cols=158 Identities=16% Similarity=0.184 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC----------------------C----CCCccc-------cCCCCCChHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND----------------------G----GYNSLQ-------ISPGQFDERVFK 120 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~----------------------g----~~~~~~-------~~pg~~de~~l~ 120 (430)
++-+++++.|+.|+=.|+|..=.++-.+ | .|..+. |-|..+-+...+
T Consensus 16 WdW~rWEreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~ 95 (333)
T PF05089_consen 16 WDWERWEREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAE 95 (333)
T ss_dssp --HHHHHHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHH
Confidence 5789999999999999999876644111 0 011111 112233345555
Q ss_pred HHHHHHHHHHHcCCEEEEeccCCcccCCCc-chhh--------hhhhhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHHH
Q 014151 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGK-TQYV--------NWAWEEGIGISSSNDSF--FFDPSIHKYFKHYVKTVL 189 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~-~~y~--------~W~~~~G~~~~~~~~~f--~~d~~~~~~~~~~~~~lv 189 (430)
.=.++++..++.||..|++-+..- ..... ..|| .|.. . ....| .+||-..+.-+.++++..
T Consensus 96 Lq~kIl~RmreLGm~PVLPaF~G~-VP~~~~~~~P~a~i~~~~~W~~---f----~~~~~L~P~dplF~~i~~~F~~~q~ 167 (333)
T PF05089_consen 96 LQKKILDRMRELGMTPVLPAFAGH-VPRAFKRKYPNANITRQGNWNG---F----CRPYFLDPTDPLFAEIAKLFYEEQI 167 (333)
T ss_dssp HHHHHHHHHHHHT-EEEEE--S-E-E-TTHHHHSTT--EE---EETT---E----E--EEE-SS--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccCCCcCCC-CChHHHhcCCCCEEeeCCCcCC---C----CCCceeCCCCchHHHHHHHHHHHHH
Confidence 667999999999999999744210 00000 1111 1211 0 00111 256777777888888888
Q ss_pred hccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCE-EEEc
Q 014151 190 TRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHL-VTVG 249 (430)
Q Consensus 190 ~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~l-V~~G 249 (430)
+. |+ ...+.+-|..||-..... ..+-+.+-.+.+.+.+++.||+.. |..|
T Consensus 168 ~~--------yG-~~~~Y~~D~FnE~~p~~~-~~~~l~~~s~~v~~am~~~dp~AvWvmQg 218 (333)
T PF05089_consen 168 KL--------YG-TDHIYAADPFNEGGPPSG-DPEYLANVSKAVYKAMQAADPDAVWVMQG 218 (333)
T ss_dssp HH--------H----SEEE--TTTTS---TT-S---HHHHHHHHHHHHHHH-TT-EEEEEE
T ss_pred Hh--------cC-CCceeCCCccCCCCCCCC-chHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 88 98 668999999999776543 234477778888899999999864 5544
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=88.83 E-value=16 Score=37.32 Aligned_cols=177 Identities=13% Similarity=0.201 Sum_probs=91.1
Q ss_pred EEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc----CCC--CCChHHH-HHHHHHHHHH
Q 014151 57 YVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI----SPG--QFDERVF-KALDHVIVEA 129 (430)
Q Consensus 57 ~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~----~pg--~~de~~l-~~lD~~l~~A 129 (430)
.+.|.|.|+..... .+++.+.+.++.++++|++.+=+ .+| |..-.. .-| ..|++.| +.|..+++.+
T Consensus 41 ~pv~~nsW~~~~~d---~~e~~i~~~a~~~~~~G~e~fvi---DDG-W~~~r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i 113 (394)
T PF02065_consen 41 PPVGWNSWEAYYFD---ITEEKILELADAAAELGYEYFVI---DDG-WFGGRDDDNAGLGDWEPDPKKFPNGLKPLADYI 113 (394)
T ss_dssp --EEEESHHHHTTG-----HHHHHHHHHHHHHHT-SEEEE----SS-SBCTESTTTSTTSBECBBTTTSTTHHHHHHHHH
T ss_pred CceEEEcccccCcC---CCHHHHHHHHHHHHHhCCEEEEE---cCc-cccccCCCcccCCceeEChhhhCCcHHHHHHHH
Confidence 35678865433222 46899999999999999996555 443 532111 012 1233333 3588999999
Q ss_pred HHcCCEEEEeccCCc--ccCCCcchhhhhhhhhC-CCCCCCCCC---CCCCHHHHHHHHHHHHHHHhccCCcccccccCC
Q 014151 130 RKNGVRLLLSLVNNL--QAYGGKTQYVNWAWEEG-IGISSSNDS---FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND 203 (430)
Q Consensus 130 ~~~Gi~vil~l~~~w--~~~gg~~~y~~W~~~~G-~~~~~~~~~---f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~ 203 (430)
++.||+.=|=+...- .+.--...+|+|....+ .......+. -+++|++++...+.+..++.. ++ -
T Consensus 114 ~~~Gmk~GlW~ePe~v~~~S~l~~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~--------~g-i 184 (394)
T PF02065_consen 114 HSLGMKFGLWFEPEMVSPDSDLYREHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLRE--------WG-I 184 (394)
T ss_dssp HHTT-EEEEEEETTEEESSSCHCCSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHH--------TT--
T ss_pred HHCCCeEEEEeccccccchhHHHHhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHh--------cC-C
Confidence 999999966331100 00000123567764311 111011111 257899999999999888776 32 1
Q ss_pred CceeEEeecCCCCCCCCC-ChHHHHHHH---HHHHHHHHhcCCCCEEEEcc
Q 014151 204 PTIFAWELINEPRCMSDP-SGDTLQDWI---DEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 204 p~I~~wel~NEp~~~~~~-~~~~~~~w~---~~~~~~Ir~~dp~~lV~~G~ 250 (430)
..|- ||-.-........ ..+...+.+ .++.+.||+.-|+.+|-.-+
T Consensus 185 dYiK-~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~L~~~~P~v~iE~Cs 234 (394)
T PF02065_consen 185 DYIK-WDFNRDITEAGSPSLPEGYHRYVLGLYRLLDRLRARFPDVLIENCS 234 (394)
T ss_dssp SEEE-EE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHHHHHHTTTSEEEE-B
T ss_pred CEEE-eccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCcEEEecc
Confidence 1232 6653333222111 112333333 36777889999999886543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=88.82 E-value=2.2 Score=43.90 Aligned_cols=158 Identities=10% Similarity=0.096 Sum_probs=97.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCC--------------------------CCccc---cCCCCCChH----HHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGG--------------------------YNSLQ---ISPGQFDER----VFK 120 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~--------------------------~~~~~---~~pg~~de~----~l~ 120 (430)
+.-+++++.++.|+=+|+|.+=.|.-.+.- |.++- .-.|-..+. .+-
T Consensus 75 W~w~qWeR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~ 154 (666)
T KOG2233|consen 75 WGWEQWEREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLL 154 (666)
T ss_pred echHHHHhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHH
Confidence 357999999999999999988775311100 11110 001112221 222
Q ss_pred HHHHHHHHHHHcCCEEEEeccCCcccCCCcch-------------hhhhhhhhCCCCCCCCCCC---CCCHHHHHHHHHH
Q 014151 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ-------------YVNWAWEEGIGISSSNDSF---FFDPSIHKYFKHY 184 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~-------------y~~W~~~~G~~~~~~~~~f---~~d~~~~~~~~~~ 184 (430)
.-.++|+...+.||.++++-+.. -.+. .+.|-+- +. ...-.+ -.||-.++.=..+
T Consensus 155 LqkrIidrm~~lGmTpvLPaFaG-----~VP~al~rlfPesnf~rl~rWn~f---~s-~~~C~l~v~P~dplF~eIgs~F 225 (666)
T KOG2233|consen 155 LQKRIIDRMLELGMTPVLPAFAG-----HVPDALERLFPESNFTRLPRWNNF---TS-RYSCMLLVSPFDPLFQEIGSTF 225 (666)
T ss_pred HHHHHHHHHHHcCCCccchhhcc-----ccHHHHHHhCchhceeeccccCCC---Cc-ceeeeEEccCCcchHHHHHHHH
Confidence 33589999999999999875431 1111 1112100 00 000011 2466677777789
Q ss_pred HHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 185 VKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 185 ~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
+++..+. |+...+|..=|..||...+.. .++-++.-..++....|++|++..-.+.
T Consensus 226 lr~~~ke--------fG~~tniy~~DpFNE~~Pp~s-epey~~staaAiyesm~kvdknaVWllQ 281 (666)
T KOG2233|consen 226 LRHQIKE--------FGGVTNIYSADPFNEILPPES-EPEYVKSTAAAIYESMKKVDKNAVWLLQ 281 (666)
T ss_pred HHHHHHH--------hCCcccccccCcccccCCCCC-ChHHHHHHHHHHHHHHhccCcceEEeee
Confidence 9999998 998889999999999776543 3455666667777788999999765554
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.68 E-value=20 Score=38.87 Aligned_cols=160 Identities=10% Similarity=0.134 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC----CCC--Ccc-ccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND----GGY--NSL-QISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~----g~~--~~~-~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
..+..++.+..+++||+|+|-+....+ ++| ... .-+| .+|. .-+.|.++||+|.++||-|||+..-+ .
T Consensus 163 ~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sryG--tPedfk~fVD~aH~~GIgViLD~V~~--H 238 (628)
T COG0296 163 YFELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRYG--TPEDFKALVDAAHQAGIGVILDWVPN--H 238 (628)
T ss_pred HHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccCC--CHHHHHHHHHHHHHcCCEEEEEecCC--c
Confidence 467889999999999999999865432 223 111 0011 1221 13467899999999999999986531 2
Q ss_pred CCCcchhhhhhhhhCCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEE----
Q 014151 147 YGGKTQYVNWAWEEGIGIS-------------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAW---- 209 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~-------------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~w---- 209 (430)
++--..|..... |.... .....++..++++..+..-...-++. =-+-|.++-.-++++-.
T Consensus 239 F~~d~~~L~~fd--g~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~-yHiDGlRvDAV~smly~d~~~ 315 (628)
T COG0296 239 FPPDGNYLARFD--GTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEE-YHIDGLRVDAVASMLYLDYSR 315 (628)
T ss_pred CCCCcchhhhcC--CccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHH-hCCcceeeehhhhhhccchhh
Confidence 221111221111 11110 01122233466776666555555554 11222222222233222
Q ss_pred ----eecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCC
Q 014151 210 ----ELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKH 244 (430)
Q Consensus 210 ----el~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~ 244 (430)
.+-||..... .-...++++++.+.|+..-|..
T Consensus 316 ~~~~~~~n~~ggr~---n~~a~efl~~~n~~i~~~~pg~ 351 (628)
T COG0296 316 AEGEWVPNEYGGRE---NLEAAEFLRNLNSLIHEEEPGA 351 (628)
T ss_pred hhhcccccccCCcc---cHHHHHHhhhhhhhhcccCCCc
Confidence 2334443321 2345678888888898887766
|
|
| >cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins | Back alignment and domain information |
|---|
Probab=86.62 E-value=1.5 Score=43.88 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=63.8
Q ss_pred HHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccC
Q 014151 124 HVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRN 202 (430)
Q Consensus 124 ~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~ 202 (430)
..+++|+++|++|+-+++..|. ++. .|.. .+..+ ++.+..+.+-+-.|+.. |+=
T Consensus 50 ~~idaAHknGV~Vlgti~~e~~--~~~----~~~~-----------~lL~~~~~~~~~~a~kLv~lak~--------yGf 104 (339)
T cd06547 50 DWINAAHRNGVPVLGTFIFEWT--GQV----EWLE-----------DFLKKDEDGSFPVADKLVEVAKY--------YGF 104 (339)
T ss_pred HHHHHHHhcCCeEEEEEEecCC--Cch----HHHH-----------HHhccCcccchHHHHHHHHHHHH--------hCC
Confidence 4589999999999999876653 222 2322 22334 66677777888888888 876
Q ss_pred CCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 203 DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 203 ~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+--. +...|.+. .....+.+.+|++++.+.+++..|+..|.
T Consensus 105 DGw~--iN~E~~~~--~~~~~~~l~~F~~~L~~~~~~~~~~~~v~ 145 (339)
T cd06547 105 DGWL--INIETELG--DAEKAKRLIAFLRYLKAKLHENVPGSLVI 145 (339)
T ss_pred CceE--eeeeccCC--cHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Confidence 6433 33333331 11135789999999999999998886663
|
The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod |
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=86.56 E-value=2.7 Score=44.98 Aligned_cols=64 Identities=23% Similarity=0.460 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC-----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG-----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g-----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+.|+.++++|+++|=+-.+... +|.. ....| .| -..+.|++++++|+++||+||+++.
T Consensus 31 dl~gi~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~--Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDP-TY--GTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred CHHHHHHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667788899999999999987443210 1100 00111 11 1246899999999999999999875
|
|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=86.49 E-value=1.6 Score=47.57 Aligned_cols=59 Identities=20% Similarity=0.491 Sum_probs=39.3
Q ss_pred HHHHHHHcCCCEEEEccccC-C--------------CCCc---cccCCCCCC---hHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 82 MLQAGAKMGLTVCRTWAFND-G--------------GYNS---LQISPGQFD---ERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 82 ~~~~~~~~G~n~vR~~~~~~-g--------------~~~~---~~~~pg~~d---e~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.|+.++++|+|+|=+-...+ . +|.+ +.++| .|. +...+.|.++|++|+++||+||+++
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~yfa~d~-~ygt~~~~~~~efk~LV~~~H~~GI~VIlDv 262 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLAMFALDP-AYASGPETALDEFRDAVKALHKAGIEVILDV 262 (658)
T ss_pred chHHHHHcCCCEEEecCcccCCCcccccccccccccCccccccccccc-ccCCCCcchHHHHHHHHHHHHHCCCEEEEEE
Confidence 48999999999999843211 0 0111 11111 222 1346789999999999999999986
Q ss_pred c
Q 014151 141 V 141 (430)
Q Consensus 141 ~ 141 (430)
.
T Consensus 263 V 263 (658)
T PRK03705 263 V 263 (658)
T ss_pred c
Confidence 4
|
|
| >PF07488 Glyco_hydro_67M: Glycosyl hydrolase family 67 middle domain; InterPro: IPR011100 Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans | Back alignment and domain information |
|---|
Probab=86.40 E-value=4.5 Score=39.41 Aligned_cols=100 Identities=16% Similarity=0.273 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCccc---CCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA---YGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~---~gg~~ 151 (430)
+.+++.+.-+.+++.|+|.|=+ ++. -..+....++.++.+.++.+..+.+||+|.|++. +.. .||.+
T Consensus 55 ~~~R~~~YARllASiGINgvvl---NNV-----Na~~~~Lt~~~l~~v~~lAdvfRpYGIkv~LSvn--FasP~~lggL~ 124 (328)
T PF07488_consen 55 DLTRYRDYARLLASIGINGVVL---NNV-----NANPKLLTPEYLDKVARLADVFRPYGIKVYLSVN--FASPIELGGLP 124 (328)
T ss_dssp --HHHHHHHHHHHHTT--EEE----S-S-----S--CGGGSTTTHHHHHHHHHHHHHTT-EEEEEE---TTHHHHTTS-S
T ss_pred chhHHHHHHHHHhhcCCceEEe---ccc-----ccChhhcCHHHHHHHHHHHHHHhhcCCEEEEEee--ccCCcccCCcC
Confidence 5689999999999999999887 321 1122334567799999999999999999999863 211 12221
Q ss_pred hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeec
Q 014151 152 QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELI 212 (430)
Q Consensus 152 ~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~ 212 (430)
..--.||++++.+++-.++| |+.-|-.-++-+-
T Consensus 125 -----------------TaDPld~~V~~WW~~k~~eI-----------Y~~IPDfgGflVK 157 (328)
T PF07488_consen 125 -----------------TADPLDPEVRQWWKDKADEI-----------YSAIPDFGGFLVK 157 (328)
T ss_dssp --------------------TTSHHHHHHHHHHHHHH-----------HHH-TT--EEEE-
T ss_pred -----------------cCCCCCHHHHHHHHHHHHHH-----------HHhCCCccceEEE
Confidence 01124789988888888887 5556666677663
|
This family represents the central catalytic domain of alpha-glucuronidase [].; GO: 0046559 alpha-glucuronidase activity, 0045493 xylan catabolic process, 0005576 extracellular region; PDB: 1MQP_A 1K9E_A 1MQQ_A 1L8N_A 1K9D_A 1MQR_A 1K9F_A 1GQL_A 1GQI_B 1GQJ_B .... |
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=86.10 E-value=2.8 Score=44.76 Aligned_cols=167 Identities=19% Similarity=0.251 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
+-.-+.+.|+.++++|+|+|=+-.+.. . .|.. ....| .| -..+.|.+++++|+++||+||+++.-+ .
T Consensus 25 ~~~gi~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~-~~--Gt~~~~~~lv~~ah~~gi~vilD~v~N--H 99 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINP-LF--GTMADFEELVSEAKKRNIKIMLDMVFN--H 99 (543)
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEECcc--c
Confidence 566788889999999999998743311 0 1100 01111 11 135789999999999999999987532 0
Q ss_pred CCC-----------cchhhhhh---hhhCCCCC---------------------------CCCCCCCCCHHHHHHHHHHH
Q 014151 147 YGG-----------KTQYVNWA---WEEGIGIS---------------------------SSNDSFFFDPSIHKYFKHYV 185 (430)
Q Consensus 147 ~gg-----------~~~y~~W~---~~~G~~~~---------------------------~~~~~f~~d~~~~~~~~~~~ 185 (430)
.+. ...|..|. ...|.+.. ....--+.+|++++.+.+.+
T Consensus 100 ~~~~~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~~ 179 (543)
T TIGR02403 100 TSTEHEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDVV 179 (543)
T ss_pred cccchHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHHH
Confidence 110 11122221 00010000 00111256799999999988
Q ss_pred HHHHhccCCcccccccCCCceeEE-eecCCCCC---CCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 186 KTVLTRKNTITGVEYRNDPTIFAW-ELINEPRC---MSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 186 ~~lv~R~n~~tg~~yk~~p~I~~w-el~NEp~~---~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+..+++ .+.|.++---..|.-. .+.++|.. ....+.+...+|++++.+.+++ .|+ .+++|.
T Consensus 180 ~~W~~~--giDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~-~~lvgE 244 (543)
T TIGR02403 180 NFWRDK--GVDGFRLDVINLISKDQFFEDDEIGDGRRFYTDGPRVHEYLQEMNQEVFG-DND-SVTVGE 244 (543)
T ss_pred HHHHHc--CCCEEEEeeehhhccCcccCCCCCCCCccccCCChHHHHHHHHHHHHhhc-cCC-eEEEEE
Confidence 888864 5555444111111000 01122210 0001234567889999888887 665 456664
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=85.54 E-value=26 Score=39.95 Aligned_cols=120 Identities=16% Similarity=0.261 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHcCCEEEEecc-CCcccCCCc-------chh-hhhh---hhhCCCCCCC--CCCC-CCCHHHHHHHH
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLV-NNLQAYGGK-------TQY-VNWA---WEEGIGISSS--NDSF-FFDPSIHKYFK 182 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~-~~w~~~gg~-------~~y-~~W~---~~~G~~~~~~--~~~f-~~d~~~~~~~~ 182 (430)
....+.++|+.|.++||+||+++. ||-.. +|. +.. +.|. ...|. .... ..+. -.++-+++.+.
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~~-~g~~~~~s~ld~~vP~YY~r~~~~G~-~~ns~c~n~~Ase~~mvrklIl 541 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLHS-SGPFDENSVLDKIVPGYYLRRNSDGF-IENSTCVNNTASEHYMVDRLIV 541 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCccccC-CCCcchhhcccCCCCCceEEECCCCC-cccCCccCCCccCCHHHHHHHH
Confidence 356789999999999999999864 32111 111 000 1111 11111 0000 0011 12255677777
Q ss_pred HHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCc
Q 014151 183 HYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF 253 (430)
Q Consensus 183 ~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~ 253 (430)
+-++.-++. |+=| =+=++|+..-... .-...+..++++....+..|...++.+| |||
T Consensus 542 Dsl~yW~~e--------y~VD--GFRFDlmg~i~~~---tm~~~~~~L~~i~~~~~~~dg~~i~lyG-EgW 598 (970)
T PLN02877 542 DDLLNWAVN--------YKVD--GFRFDLMGHLMKR---TMVRAKDALQSLTLERDGVDGSSIYLYG-EGW 598 (970)
T ss_pred HHHHHHHHH--------hCCC--EEEEEccccccHH---HHHHHHHHHHHHhhhhcccCCCceEEEE-eCC
Confidence 888887776 6433 1226777654321 1123344455555555555645566777 576
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=85.39 E-value=1.6 Score=45.89 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCC---C-CCccccC----------CCCCChH--HHHHHHHHHHHHHHcCCEEEEe
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDG---G-YNSLQIS----------PGQFDER--VFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g---~-~~~~~~~----------pg~~de~--~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
...+.+-|+.++++|+++|=+-..... . +....+. +|..|+. ..+.|.+++++|+++||+||++
T Consensus 21 ~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D 100 (479)
T PRK09441 21 WNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYAD 100 (479)
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 345778899999999998877332111 0 0011110 0111211 3567999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 101 ~V 102 (479)
T PRK09441 101 VV 102 (479)
T ss_pred EC
Confidence 74
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=84.88 E-value=5.2 Score=44.59 Aligned_cols=83 Identities=16% Similarity=0.261 Sum_probs=53.3
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCC----CCCcc---ccCCCCCChHHHHHHHH
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNSL---QISPGQFDERVFKALDH 124 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~~---~~~pg~~de~~l~~lD~ 124 (430)
+|..+.+-|+|-+ .+..+ . -...+.+.++.++++|+++|=+...... +|.+. ...+ .|. ..+.|..
T Consensus 500 ~~~eVmlQgF~Wd-s~~dg--~-w~~~I~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds-~yG--T~~ELk~ 572 (894)
T PLN02784 500 SGFEILCQGFNWE-SHKSG--R-WYMELGEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNS-RYG--TIDELKD 572 (894)
T ss_pred CCceEEEEeEEcC-cCCCC--c-hHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCc-CcC--CHHHHHH
Confidence 5678888999822 11111 1 1467888899999999999988543221 11100 0000 111 2457899
Q ss_pred HHHHHHHcCCEEEEecc
Q 014151 125 VIVEARKNGVRLLLSLV 141 (430)
Q Consensus 125 ~l~~A~~~Gi~vil~l~ 141 (430)
+|++|+++||+||+++.
T Consensus 573 LI~a~H~~GIkVIlDiV 589 (894)
T PLN02784 573 LVKSFHEVGIKVLGDAV 589 (894)
T ss_pred HHHHHHHCCCEEEEEEC
Confidence 99999999999999864
|
|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Probab=84.13 E-value=20 Score=39.18 Aligned_cols=240 Identities=13% Similarity=0.194 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCC----CCCc----cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-ccc
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS----LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN-LQA 146 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~----~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~-w~~ 146 (430)
.+.+...|+.++++|+|+|=+-+|++. .++. ...-|++ .+.|+.+-..+ +.++|++|.-=+... ++.
T Consensus 333 ~~~L~~lLdrlk~~G~ntV~lqafadp~gd~~~~s~yfP~~~lp~r--~d~f~~~aw~l--~~r~~v~v~AWmp~~~~~~ 408 (671)
T PRK14582 333 DRNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKELYFPNRLLPMR--ADLFNRVAWQL--RTRAGVNVYAWMPVLSFDL 408 (671)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCCCCccccccccCccccccc--cCCcCHHHHHH--HHhhCCEEEEeccceeecc
Confidence 467889999999999999998787642 1211 1112332 22333433444 889999985311100 100
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEe-----------
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSF-----FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE----------- 210 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f-----~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~we----------- 210 (430)
.-..+.-..+. ..+.+. ..+.++ .-+|++++..++..+.++.+ .++.|+.|-|+..+--||
T Consensus 409 ~~~~~~~~~~~-~~~~~~-~~~~~~~~rl~P~~pe~r~~i~~i~~dla~~-~~~dGilf~Dd~~l~d~ed~s~~a~~~~~ 485 (671)
T PRK14582 409 DPTLPRVKRLD-TGEGKA-QIHPEQYRRLSPFDDRVRAQVGMLYEDLAGH-AAFDGILFHDDAVLSDYEDASAPAITAYQ 485 (671)
T ss_pred CCCcchhhhcc-ccCCcc-ccCCCCCcCCCCCCHHHHHHHHHHHHHHHHh-CCCceEEecccccccccccCCHHHHHHHH
Confidence 00000000010 000000 001112 23689999999999999886 679999998886554433
Q ss_pred ---ecCCCCCCCCCChHHHHHH-----------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc--chhhccC
Q 014151 211 ---LINEPRCMSDPSGDTLQDW-----------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE--MWASALG 274 (430)
Q Consensus 211 ---l~NEp~~~~~~~~~~~~~w-----------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~--~w~~~~g 274 (430)
|......- ..+++.+.+| ..++++.+|...|..+.|.. ..|... -.+|. .|..+.=
T Consensus 486 ~~g~~~~~~~~-~~~~~~~~~wt~~k~~~l~~f~~~l~~~v~~~~~~~~~tar--ni~a~~-----~l~p~~e~w~aQ~l 557 (671)
T PRK14582 486 QAGFSGSLSEI-RQNPEQFKQWTRFKSRALTDFTLELSARVKAIRGPQVKTAR--NIFALP-----VIQPESEAWFAQNL 557 (671)
T ss_pred HcCCCcchhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccceeec--cccccc-----cCChhHHHHHHhHH
Confidence 22111110 0123445444 56788888998876666654 233321 12442 4643211
Q ss_pred cchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhc-CCCcEEEEecCCCCCC
Q 014151 275 SDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKE-LNKPVFFTEYGLSNLI 341 (430)
Q Consensus 275 ~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~-~gkPv~v~EfG~~~~~ 341 (430)
.+| ....|++.+-..|. ......+.. .+|+.+.++..++. .++-=.|-|..+.+..
T Consensus 558 ~~~-----~~~yD~~a~mampy--me~~~~~~~----~~wl~~l~~~v~~~~~~~~k~vfelq~~dw~ 614 (671)
T PRK14582 558 DDF-----LKSYDWTAPMAMPL--MEGVAEKSS----DAWLIQLVNQVKNIPGALDKTIFELQARDWQ 614 (671)
T ss_pred HHH-----Hhhcchhhhhcchh--hhccCcccH----HHHHHHHHHHHHhcCCcccceEEEeeccccc
Confidence 122 23566666655442 111111112 34555544433321 2333467788886643
|
|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=83.90 E-value=3.6 Score=45.82 Aligned_cols=68 Identities=15% Similarity=0.203 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---CCCCcccc-CCCCCCh--HHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---GGYNSLQI-SPGQFDE--RVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g~~~~~~~-~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+-..+.+.+..++++|+++|=+-.+.. ++...+.+ .....|+ -..+.|..++++|+++||+||+++.-
T Consensus 14 tf~~~~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDiVp 87 (825)
T TIGR02401 14 TFDDAAALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDIVP 87 (825)
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 567899999999999999998733211 11000000 0011111 13677899999999999999999754
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Probab=83.74 E-value=8.8 Score=38.68 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=62.4
Q ss_pred HHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC
Q 014151 124 HVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND 203 (430)
Q Consensus 124 ~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~ 203 (430)
+++..|+++|++|++.-. .+ .....|++.|+.|.+-+-.++++ |.=+
T Consensus 68 ~~~~~A~~~~v~v~~~~~--------~~-----------------~~~l~~~~~R~~fi~siv~~~~~--------~gfD 114 (358)
T cd02875 68 ELLCYAHSKGVRLVLKGD--------VP-----------------LEQISNPTYRTQWIQQKVELAKS--------QFMD 114 (358)
T ss_pred HHHHHHHHcCCEEEEECc--------cC-----------------HHHcCCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 678999999999987521 10 01245888999998888888887 6555
Q ss_pred CceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 204 PTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 204 p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
---+-||--+.. ...+.+.+..+++++.+.+++..+.-.|++.
T Consensus 115 GIdIDwE~p~~~---~~~d~~~~t~llkelr~~l~~~~~~~~Lsva 157 (358)
T cd02875 115 GINIDIEQPITK---GSPEYYALTELVKETTKAFKKENPGYQISFD 157 (358)
T ss_pred eEEEcccCCCCC---CcchHHHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 445556643321 1123577889999999999988777777764
|
Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase. |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=83.63 E-value=4 Score=44.71 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C-------------CCCcccc-CCCCCCh--HHHHHHHHHHHHHHHcCCE
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G-------------GYNSLQI-SPGQFDE--RVFKALDHVIVEARKNGVR 135 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g-------------~~~~~~~-~pg~~de--~~l~~lD~~l~~A~~~Gi~ 135 (430)
+-.-+.+-|+.++++|+|+|=+-...+ + .+....+ ..-..|+ -..+.|+.+|++|+++||+
T Consensus 228 dl~Gi~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~ 307 (683)
T PRK09505 228 DLRGLTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIR 307 (683)
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 345577889999999999988632211 0 0000000 0001122 1367899999999999999
Q ss_pred EEEecc
Q 014151 136 LLLSLV 141 (430)
Q Consensus 136 vil~l~ 141 (430)
||+++.
T Consensus 308 VilD~V 313 (683)
T PRK09505 308 ILFDVV 313 (683)
T ss_pred EEEEEC
Confidence 999864
|
|
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.20 E-value=3.9 Score=45.78 Aligned_cols=69 Identities=13% Similarity=0.216 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC---CCCCcccc-CCCCCCh--HHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND---GGYNSLQI-SPGQFDE--RVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~---g~~~~~~~-~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
++-..+.+.+..++++|+|+|=+-.+.. ++...+.+ .....|+ -..+.|..++++|+++||+||+++.-
T Consensus 17 ~tf~~~~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDiV~ 91 (879)
T PRK14511 17 FTFDDAAELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDIVP 91 (879)
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3577899999999999999998743311 11000000 0011111 13477999999999999999998753
|
|
| >PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=83.01 E-value=6.8 Score=39.94 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
++.+.++++|+.+++.|++..=+-+.. -|+-..+.|..++++|++.|.||.+++.
T Consensus 14 yt~~dw~~di~~A~~~GIDgFaLNig~-------------~d~~~~~~l~~a~~AA~~~gFKlf~SfD 68 (386)
T PF03659_consen 14 YTQEDWEADIRLAQAAGIDGFALNIGS-------------SDSWQPDQLADAYQAAEAVGFKLFFSFD 68 (386)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccc-------------CCcccHHHHHHHHHHHHhcCCEEEEEec
Confidence 468999999999999999987762210 1122357889999999999999999873
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY). |
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Probab=83.00 E-value=30 Score=34.57 Aligned_cols=158 Identities=17% Similarity=0.177 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHH--HHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKAL--DHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~l--D~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
+.+.+++.++.+++.|+.+==+|. |..|..- ...-.+|++.|... .++++..++.|++|++-++..-....-...
T Consensus 22 ~~~~v~~~~~~~r~~~iP~d~i~l--D~~~~~~-~~~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~ 98 (339)
T cd06602 22 NVDEVKEVVENMRAAGIPLDVQWN--DIDYMDR-RRDFTLDPVRFPGLKMPEFVDELHANGQHYVPILDPAISANEPTGS 98 (339)
T ss_pred CHHHHHHHHHHHHHhCCCcceEEE--CcccccC-ccceecccccCCCccHHHHHHHHHHCCCEEEEEEeCccccCcCCCC
Confidence 678899999999999987555543 2123110 01124556666666 899999999999999976442110000001
Q ss_pred hhhhhhh----------hCCC------CCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCC
Q 014151 153 YVNWAWE----------EGIG------ISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216 (430)
Q Consensus 153 y~~W~~~----------~G~~------~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~ 216 (430)
|..+... .|.+ .+...---|+||++++.+.+.++.++.. ++- -.-|.=+|||.
T Consensus 99 ~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~--------~Gv---dg~w~D~~Ep~ 167 (339)
T cd06602 99 YPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQ--------VPF---DGLWIDMNEPS 167 (339)
T ss_pred CHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhc--------CCC---cEEEecCCCCc
Confidence 2222111 0110 0001112278999999999999887665 322 22367789996
Q ss_pred CCCCCChHHH--HHHHHHHHHHHHhcCCCCEEEE
Q 014151 217 CMSDPSGDTL--QDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 217 ~~~~~~~~~~--~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
.... -.++ ..+.+.....+++...+++++.
T Consensus 168 ~~~~--~hN~y~~~~~~~~~~~~~~~~~~r~~~~ 199 (339)
T cd06602 168 NFYD--VHNLYGLSEAIATYKALQSIPGKRPFVI 199 (339)
T ss_pred hHhh--hcchhhHHHHHHHHHHHHhcCCCCCEEE
Confidence 4210 0111 1244555666777633445444
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of |
| >PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 | Back alignment and domain information |
|---|
Probab=82.78 E-value=44 Score=32.53 Aligned_cols=240 Identities=15% Similarity=0.206 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc---CCCCCChHHHHHHHHHH-HHHHHcCCEEEE--eccCCcccCCC
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI---SPGQFDERVFKALDHVI-VEARKNGVRLLL--SLVNNLQAYGG 149 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~---~pg~~de~~l~~lD~~l-~~A~~~Gi~vil--~l~~~w~~~gg 149 (430)
...+...|++++++|+|+|=+=+|+|..-..... -|.+.-+-.-+-+.++. ++.-+.|++|.- ++.. |+- ++
T Consensus 16 ~~nl~~l~~ri~~~~~~tV~Lqaf~d~~gdg~~~~~YFpnr~lpvraDlf~rvawql~tr~~v~VyAWMPvla-f~l-p~ 93 (294)
T PF14883_consen 16 ERNLDKLIQRIKDMGINTVYLQAFADPDGDGNADAVYFPNRHLPVRADLFNRVAWQLRTRAGVKVYAWMPVLA-FDL-PK 93 (294)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeeeCCCCCCceeeEEcCCCCCchHHHHHHHHHHHHhhhhCCEEEEeeehhh-ccC-CC
Confidence 3567888999999999999887776521100000 01122223334555666 555588998854 2211 221 11
Q ss_pred cchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEee---cCCCCCCCCCChHHH
Q 014151 150 KTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL---INEPRCMSDPSGDTL 226 (430)
Q Consensus 150 ~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel---~NEp~~~~~~~~~~~ 226 (430)
.+....+......+. ....-=..+|++++..++.-+-++.. ..+.|+.|.|+..+--+|+ .++|.. ......+
T Consensus 94 ~~~~~~~~~~~~~~~-~y~RLSPf~p~~r~~I~~IYeDLA~y-~~fdGILFhDDa~L~D~E~~~~~~~~~~--~~Kt~~L 169 (294)
T PF14883_consen 94 VKRADEVRTDRPDPD-GYRRLSPFDPEARQIIKEIYEDLARY-SKFDGILFHDDAVLSDFEIAAIRQNPAD--RQKTRAL 169 (294)
T ss_pred cchhhhccccCCCCC-CceecCCCCHHHHHHHHHHHHHHHhh-CCCCeEEEcCCccccchhhhhhccChhh--HHHHHHH
Confidence 111111110000000 00111124688988888888888765 7899999988866655551 111110 0013567
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc--chhhccCcchhhccCCCCcceEEeeecCCCCCCCcch
Q 014151 227 QDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE--MWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEF 304 (430)
Q Consensus 227 ~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~--~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~ 304 (430)
..+..++++.+|...|.....- .+|... -.+|. .|....=.+|. ...|++.+-..|.. ....
T Consensus 170 i~ft~eL~~~v~~~rp~lkTAR---Niya~p-----vl~P~se~WfAQnl~~fl-----~~YD~taimAMPym--E~~~- 233 (294)
T PF14883_consen 170 IDFTMELAAAVRRYRPDLKTAR---NIYAEP-----VLNPESEAWFAQNLDDFL-----KAYDYTAIMAMPYM--EQAE- 233 (294)
T ss_pred HHHHHHHHHHHHHhCccchhhh---cccccc-----cCCcchhhHHHHhHHHHH-----HhCCeeheeccchh--cccc-
Confidence 8889999999999987654332 222211 12442 45432111222 35677766555532 2111
Q ss_pred hhhHHHHHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCC
Q 014151 305 EDDLKFVTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIK 342 (430)
Q Consensus 305 ~~~~~~~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~ 342 (430)
. -..|+.+.++..++.. ++-=.|-|.-+.....
T Consensus 234 -~----~~~WL~~Lv~~v~~~p~~l~KtvFELQa~dwr~ 267 (294)
T PF14883_consen 234 -D----PEQWLAQLVDAVAARPGGLDKTVFELQAVDWRT 267 (294)
T ss_pred -C----HHHHHHHHHHHHHhcCCcccceEEEEeccCCcc
Confidence 1 2355655555444322 2445777888877653
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=82.31 E-value=37 Score=38.54 Aligned_cols=114 Identities=13% Similarity=0.201 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc------chh-hhhhhh---hCCCCC-CCCCCC-CCCHHHHHHHHHHH
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK------TQY-VNWAWE---EGIGIS-SSNDSF-FFDPSIHKYFKHYV 185 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~------~~y-~~W~~~---~G~~~~-~~~~~f-~~d~~~~~~~~~~~ 185 (430)
....|.++|+.|+++||+||+++.-+-...+|. +.+ +.|... .|.... ....++ ..++.+++.+.+.+
T Consensus 402 Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl 481 (898)
T TIGR02103 402 RIKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSL 481 (898)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHH
Confidence 356889999999999999999864221111111 111 112111 110000 000111 23577888888888
Q ss_pred HHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCc
Q 014151 186 KTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF 253 (430)
Q Consensus 186 ~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~ 253 (430)
+..++. |+=| .+ =++++..-. ..+++++.+.+|+++|+. +.+| |+|
T Consensus 482 ~~W~~e--------y~VD-GF-RfDlm~~~~----------~~f~~~~~~~l~~i~pdi-~l~G-EgW 527 (898)
T TIGR02103 482 VVWAKD--------YKVD-GF-RFDLMGHHP----------KAQMLAAREAIKALTPEI-YFYG-EGW 527 (898)
T ss_pred HHHHHH--------cCCC-EE-EEechhhCC----------HHHHHHHHHHHHHhCCCE-EEEe-cCC
Confidence 888876 6433 11 256664322 356677788899999984 4556 455
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.24 E-value=12 Score=36.13 Aligned_cols=80 Identities=14% Similarity=0.182 Sum_probs=56.6
Q ss_pred EEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHH
Q 014151 49 FML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIV 127 (430)
Q Consensus 49 f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~ 127 (430)
+.+ +|+.+.++|-+.- .+.+...+.-+.+|++|+.++|...|-. ..+|..|..-.-+.+..+-+
T Consensus 21 ~~~g~~~~~~iaGPCsi---------e~~~~~~~~A~~lk~~g~~~~r~~~~kp------RTs~~s~~G~g~~gl~~l~~ 85 (266)
T PRK13398 21 VVIGGEEKIIIAGPCAV---------ESEEQMVKVAEKLKELGVHMLRGGAFKP------RTSPYSFQGLGEEGLKILKE 85 (266)
T ss_pred EEEcCCCEEEEEeCCcC---------CCHHHHHHHHHHHHHcCCCEEEEeeecC------CCCCCccCCcHHHHHHHHHH
Confidence 444 4555677787642 2578888999999999999999966531 12344454434666777778
Q ss_pred HHHHcCCEEEEeccCC
Q 014151 128 EARKNGVRLLLSLVNN 143 (430)
Q Consensus 128 ~A~~~Gi~vil~l~~~ 143 (430)
.|++.||.++-+.++.
T Consensus 86 ~~~~~Gl~~~te~~d~ 101 (266)
T PRK13398 86 VGDKYNLPVVTEVMDT 101 (266)
T ss_pred HHHHcCCCEEEeeCCh
Confidence 8899999999888763
|
|
| >PRK09856 fructoselysine 3-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=81.63 E-value=3.1 Score=39.89 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 77 ARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 77 ~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
+.+++.++.++.+|.++|+++....+ + ...+...-+...+.|.++.+.|+++||++.+-.
T Consensus 90 ~~~~~~i~~a~~lGa~~i~~~~~~~~-~---~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~ 149 (275)
T PRK09856 90 DMIKLAMDMAKEMNAGYTLISAAHAG-Y---LTPPNVIWGRLAENLSELCEYAENIGMDLILEP 149 (275)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCC-C---CCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 46778889999999999999653221 1 111111124667889999999999999987753
|
|
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Probab=81.54 E-value=38 Score=33.78 Aligned_cols=132 Identities=14% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
.+.+++.+.++.+++.|+.+==+|+ |..|.. ....-.+|++.|.....+++..++.|++|++.++..-..-.+.+.|
T Consensus 21 ~~~~ev~~~~~~~~~~~iP~d~i~l--D~~~~~-~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y 97 (339)
T cd06603 21 KDQEDVKEVDAGFDEHDIPYDVIWL--DIEHTD-GKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHIKRDDGYYVY 97 (339)
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEE--ChHHhC-CCCceEeCcccCCCHHHHHHHHHHCCCEEEEEecCceecCCCCHHH
Confidence 3688999999999999988655543 111210 0011245677777778899999999999999765421100011122
Q ss_pred hhhhh-------hhCCCC------CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCC
Q 014151 154 VNWAW-------EEGIGI------SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRC 217 (430)
Q Consensus 154 ~~W~~-------~~G~~~------~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~ 217 (430)
..=.. ..|.+. +....--|++|++++.+.+.++.+... . ..+....|.=+|||..
T Consensus 98 ~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~--------~-~~g~~g~w~D~~Ep~~ 165 (339)
T cd06603 98 KEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYK--------G-STENLYIWNDMNEPSV 165 (339)
T ss_pred HHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhc--------c-cCCCceEEeccCCccc
Confidence 11000 001000 000111268899999999999887543 1 2233445666899863
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. |
| >PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases | Back alignment and domain information |
|---|
Probab=80.63 E-value=18 Score=35.73 Aligned_cols=92 Identities=10% Similarity=0.123 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
||+.++-.+.|+.+++.|+|+.= +...+.+-+... ...|.++.++.|.++++.|+++|+..+..++....
T Consensus 11 PWs~e~R~~l~~f~~~~kmN~Yi---YAPKdDpyhr~~Wre~Yp~~el~~l~~L~~~a~~~~V~Fv~aisPg~~------ 81 (306)
T PF07555_consen 11 PWSHEDRLDLIRFLGRYKMNTYI---YAPKDDPYHRSKWREPYPEEELAELKELADAAKANGVDFVYAISPGLD------ 81 (306)
T ss_dssp ---HHHHHHHHHHHHHTT--EEE---E--TT-TTTTTTTTS---HHHHHHHHHHHHHHHHTT-EEEEEEBGTTT------
T ss_pred CCCHHHHHHHHHHHHHcCCceEE---ECCCCChHHHhhhcccCCHHHHHHHHHHHHHHHHcCCEEEEEECcccc------
Confidence 56788889999999999999543 332111111100 02367889999999999999999999999875210
Q ss_pred hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 152 QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 152 ~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
..|++++-.+..++-+++|.+-
T Consensus 82 ------------------~~~s~~~d~~~L~~K~~ql~~l 103 (306)
T PF07555_consen 82 ------------------ICYSSEEDFEALKAKFDQLYDL 103 (306)
T ss_dssp --------------------TSHHHHHHHHHHHHHHHHCT
T ss_pred ------------------cccCcHHHHHHHHHHHHHHHhc
Confidence 0144556666666666776554
|
Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A .... |
| >PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3 | Back alignment and domain information |
|---|
Probab=80.10 E-value=24 Score=31.64 Aligned_cols=130 Identities=9% Similarity=0.043 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCcc--ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 77 ARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL--QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 77 ~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~--~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
...++..+.+++.|+.++-++.......... ...... -+..++.+.+.++.|++.|.+.+......+... .
T Consensus 27 ~~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~i~~a~~lg~~~i~~~~g~~~~~------~ 99 (213)
T PF01261_consen 27 DEAEELRRLLEDYGLKIASLHPPTNFWSPDEENGSANDE-REEALEYLKKAIDLAKRLGAKYIVVHSGRYPSG------P 99 (213)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEESSSCTGTTSTTSSSH-HHHHHHHHHHHHHHHHHHTBSEEEEECTTESSS------T
T ss_pred HHHHHHHHHHHHcCCeEEEEecccccccccccccCcchh-hHHHHHHHHHHHHHHHHhCCCceeecCcccccc------c
Confidence 4677888889999999777654432111100 001112 467789999999999999999976532100000 0
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHH
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMS 234 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~ 234 (430)
. ....+..+.+.+.++.+++. -+.+...++.|....+...... . ++++.
T Consensus 100 ------~----------~~~~~~~~~~~~~l~~l~~~--------a~~~gv~i~lE~~~~~~~~~~~---~----~~~~~ 148 (213)
T PF01261_consen 100 ------E----------DDTEENWERLAENLRELAEI--------AEEYGVRIALENHPGPFSETPF---S----VEEIY 148 (213)
T ss_dssp ------T----------SSHHHHHHHHHHHHHHHHHH--------HHHHTSEEEEE-SSSSSSSEES---S----HHHHH
T ss_pred ------C----------CCHHHHHHHHHHHHHHHHhh--------hhhhcceEEEecccCccccchh---h----HHHHH
Confidence 0 12345677777888888777 5544455555544433332110 1 46667
Q ss_pred HHHHhcCCCC
Q 014151 235 AFVKSIDKKH 244 (430)
Q Consensus 235 ~~Ir~~dp~~ 244 (430)
..++++++..
T Consensus 149 ~~l~~~~~~~ 158 (213)
T PF01261_consen 149 RLLEEVDSPN 158 (213)
T ss_dssp HHHHHHTTTT
T ss_pred HHHhhcCCCc
Confidence 7788888654
|
1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B .... |
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.08 E-value=5.4 Score=39.40 Aligned_cols=57 Identities=21% Similarity=0.222 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+.....++.|++.|+.-|=+ +- +++ ...++..+..+++++..|.+.|++||++...
T Consensus 15 ~~~~~~Yi~~~~~~Gf~~IFt---sl-----~~~--~~~~~~~~~~~~ell~~Anklg~~vivDvnP 71 (360)
T COG3589 15 KEKDIAYIDRMHKYGFKRIFT---SL-----LIP--EEDAELYFHRFKELLKEANKLGLRVIVDVNP 71 (360)
T ss_pred chhHHHHHHHHHHcCccceee---ec-----ccC--CchHHHHHHHHHHHHHHHHhcCcEEEEEcCH
Confidence 456788999999999994433 21 112 2234678999999999999999999998753
|
|
| >COG3661 AguA Alpha-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.02 E-value=28 Score=35.72 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc-cCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ-AYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~-~~gg~~~y 153 (430)
+.+++.+.-+.+++.|+|.+=+ ++. +.-+.+.-..+...+..+.++.+.-+++||++.|+..-.-. ..||.+
T Consensus 181 n~qR~kDYAR~laSiGINg~v~---NNV--Nvk~~e~~lit~~fl~k~aklAdiFR~YGIK~yLsinfaSP~~lGgL~-- 253 (684)
T COG3661 181 NDQRMKDYARALASIGINGTVL---NNV--NVKKAESYLITAPFLAKAAKLADIFRPYGIKVYLSINFASPMELGGLK-- 253 (684)
T ss_pred chHHHHHHHHHHhhcCcceEEe---ccc--ccchhhhheechHhHHHHHHHHHHhhhccceEEEEeccCCccccCCcC--
Confidence 3578889999999999998876 221 00001111235567888899999999999999998631100 012221
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeec
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELI 212 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~ 212 (430)
..---|+.+++.+++-.+.| |+.-|-.-++-+-
T Consensus 254 ---------------TADPLDe~VrawWkeka~~I-----------Y~yIPDFGGFLVK 286 (684)
T COG3661 254 ---------------TADPLDEAVRAWWKEKADEI-----------YKYIPDFGGFLVK 286 (684)
T ss_pred ---------------cCCcccHHHHHHHHHHHHHH-----------HHhcccccceEEe
Confidence 11123677777777666666 6667766666553
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 430 | ||||
| 1rh9_A | 373 | Family Gh5 Endo-Beta-Mannanase From Lycopersicon Es | 6e-84 | ||
| 3pz9_A | 383 | Native Structure Of Endo-1,4-Beta-D-Mannanase From | 1e-43 | ||
| 4awe_A | 387 | The Crystal Structure Of Chrysonilia Sitophila Endo | 4e-34 | ||
| 1qno_A | 344 | The 3-d Structure Of A Trichoderma Reesei B-mannana | 2e-32 | ||
| 1uuq_A | 440 | Exo-mannosidase From Cellvibrio Mixtus Length = 440 | 1e-25 |
| >pdb|1RH9|A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) Length = 373 | Back alignment and structure |
|
| >pdb|3PZ9|A Chain A, Native Structure Of Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila Rku-1 Length = 383 | Back alignment and structure |
|
| >pdb|4AWE|A Chain A, The Crystal Structure Of Chrysonilia Sitophila Endo-Beta-D- 1,4-Mannanase Length = 387 | Back alignment and structure |
|
| >pdb|1QNO|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From Glycoside Hydrolase Family 5 Length = 344 | Back alignment and structure |
|
| >pdb|1UUQ|A Chain A, Exo-mannosidase From Cellvibrio Mixtus Length = 440 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 430 | |||
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 1e-120 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 2e-96 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 2e-95 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 4e-78 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 1e-66 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 2e-19 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 2e-15 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 1e-11 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 2e-08 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 2e-07 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 2e-07 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 6e-07 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 1e-06 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 1e-06 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 2e-06 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 2e-06 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 3e-06 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 5e-06 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 9e-06 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 2e-05 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 2e-05 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 2e-05 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 2e-05 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 6e-05 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 1e-04 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 1e-04 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 2e-04 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 2e-04 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 3e-04 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 4e-04 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 4e-04 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 5e-04 |
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 354 bits (908), Expect = e-120
Identities = 162/376 (43%), Positives = 236/376 (62%), Gaps = 7/376 (1%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
FV +GTHF L+GK+LY+NG+N+YWLM A +R +V Q +K + V RTWAF
Sbjct: 5 NFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAF 64
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
+ GG LQ +PG ++E++F+ LD VI EA+K G+ L++SLVNN A+GGK QYV WA +
Sbjct: 65 SHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 124
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
G ++S +D FF +P + ++K+ VK VLTR NTIT V Y++DPTI +WELINEPRC S
Sbjct: 125 RGQKLTSDDD-FFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPS 183
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279
D SG T Q+W+ EM+ ++KSID HL+ +GLEGFYG + NP + G++FI
Sbjct: 184 DLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQ---YNPNSY--IFGTNFIS 238
Query: 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
N+ IDF ++H+YP+ W L E K+ ++W+ HI+D K L KP+ E+G S
Sbjct: 239 NNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDS-KMLKKPLLIAEFGKST 297
Query: 340 LIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTS 399
G+ + RD ++ I ++ AK G L WQ+ +GM ++D + +V E S
Sbjct: 298 KTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPS 357
Query: 400 TYKLLTEQSCGLGRIS 415
T +++ QS L ++S
Sbjct: 358 TSRVILLQSLRLSKLS 373
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 295 bits (755), Expect = 2e-96
Identities = 98/439 (22%), Positives = 173/439 (39%), Gaps = 55/439 (12%)
Query: 32 SYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHD--YSRARVGAMLQAGAKM 89
FV NG HF L GK + G N ++ + R R+ L +
Sbjct: 15 VATSPAHEHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAI 74
Query: 90 GLTVCRTWAFNDGG------YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN 143
G+ R A ++ ++ G +DE + + LD+++VE K + ++L N
Sbjct: 75 GVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNF 134
Query: 144 LQAYGGKTQYVNWAWEEGIGI----------SSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193
Q GG TQY+ W E + + + SF+ + ++ ++ ++TR N
Sbjct: 135 WQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVN 194
Query: 194 TITGVEYRNDPTIFAWELINEPRCMSD----PSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249
+I G Y +D TI +W+L NEPR + DW+ +A++K++D HLV+ G
Sbjct: 195 SINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSG 254
Query: 250 LEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH------DLE 303
EG G + FI +ID+ + H++ +W
Sbjct: 255 SEGEMGSVND--------------MQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAET 300
Query: 304 FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSL----RDKLYKTILDI 359
+ + +M +HI+ K+LNKP+ E+GL + + RD ++ + ++
Sbjct: 301 WPSAWEKAQNYMRAHIDVA-KQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFEL 359
Query: 360 VYKSAKRKRSGAGALIWQLFVEGM--------EEYNDDFGIVPWERTSTYKLLTEQSCGL 411
+ S ++ AG IW G +E +D G P E Y + + +
Sbjct: 360 MLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTI 419
Query: 412 GRISRLNLEKGNLKELCSH 430
+ N E H
Sbjct: 420 AIMKEFNARFQPKLEHHHH 438
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 290 bits (743), Expect = 2e-95
Identities = 123/401 (30%), Positives = 186/401 (46%), Gaps = 47/401 (11%)
Query: 32 SYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGL 91
S ML+GK G N+Y++ S + ++L++ MG+
Sbjct: 3 SSHHHHHHSSGLVPRGSHMLNGKEFRFIGSNNYYMHY-----KSNRMIDSVLESARDMGI 57
Query: 92 TVCRTWAFNDG------GYNSLQISPGQFD--------ERVFKALDHVIVEARKNGVRLL 137
V R W F DG + PG F + F+ LD+ I +A++ G++L+
Sbjct: 58 KVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLI 117
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
+ LVNN +GG QYV W + +D F+ D I + +K YV ++ N TG
Sbjct: 118 IVLVNNWDDFGGMNQYVRWFG------GTHHDDFYRDERIKEEYKKYVSFLINHVNVYTG 171
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257
V YR +PTI AWEL NE RC +D SG+TL +W+ EMS+++KS+D HLV VG EGF+
Sbjct: 172 VPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEGFFSNY 231
Query: 258 SPKRLTVNPEMWA--SALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWM 315
+ WA G D+ + + + +DF + H+YP HW E+ ++ KW+
Sbjct: 232 EGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGVS--PENYAQWGAKWI 289
Query: 316 LSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALI 375
HI+ KE+ KPV EYG+ P R +Y+ D+VY G GA+
Sbjct: 290 EDHIKIA-KEIGKPVVLEEYGIP----KSAPVNRTAIYRLWNDLVYDLG-----GDGAMF 339
Query: 376 WQLFVEGMEEYNDDFGIVPWE--------RTSTYKLLTEQS 408
W L G D+ G P + +L+ E +
Sbjct: 340 WMLAGIGEGSDRDERGYYPDYDGFRIVNDDSPEAELIREYA 380
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 245 bits (625), Expect = 4e-78
Identities = 100/383 (26%), Positives = 154/383 (40%), Gaps = 59/383 (15%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
FVT +GT F +DGK Y G N YW + A V + + GL V R W F
Sbjct: 3 SFVTISGTQFNIDGKVGYFAGTNCYWCS----FLTNHADVDSTFSHISSSGLKVVRVWGF 58
Query: 100 NDGG-----------YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148
ND S S + LD+V+ A ++ ++L++ VNN YG
Sbjct: 59 NDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118
Query: 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208
G YVN + +++ + + ++ YV+ V++R Y N IFA
Sbjct: 119 GINAYVNAFG-------GNATTWYTNTAAQTQYRKYVQAVVSR--------YANSTAIFA 163
Query: 209 WELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEM 268
WEL NEPRC + S D + W +S +VKS+D HLVT+G EG
Sbjct: 164 WELGNEPRC-NGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAY-----P 217
Query: 269 WASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNK 328
+ G+DF +N ++DF + H+YPD W + + + W+ +H K
Sbjct: 218 YTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGN------GWIQTHAAAC-LAAGK 270
Query: 329 PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQ---LFVEGMEE 385
P F EYG E ++ R G + WQ F G +
Sbjct: 271 PCVFEEYGAQQNPCTNE------------APWQTTSLTTRGMGGDMFWQWGDTFANGAQS 318
Query: 386 YNDDFGIVPWERTSTYKLLTEQS 408
+D + + + ++ L+
Sbjct: 319 NSDPYTVW-YNSSNWQCLVKNHV 340
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 1e-66
Identities = 49/394 (12%), Positives = 109/394 (27%), Gaps = 88/394 (22%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWL-----MDHAVHDYSRARVGAMLQAGAKMGLTVC 94
++ +GT+ +G ++++G N W+ H + ++ + L G
Sbjct: 3 VRLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSV 62
Query: 95 RTWAFNDGGYNSLQISPGQF---DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151
R W +G + G D + + + A+++ + + +L N
Sbjct: 63 RVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHY 122
Query: 152 QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL 211
+ + + Y H +K + +N+ + W++
Sbjct: 123 RLNGLMVD--------------TRKLQSYIDHALKPMANA--------LKNEKALGGWDI 160
Query: 212 INEPRCMSDP--------------------------SGDTLQDWIDEMSAFVKSIDKKHL 245
+NEP P S + +++ +A +K +D +
Sbjct: 161 MNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAM 220
Query: 246 VTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYP--DHWFHDLE 303
VTVG S + + F VH Y +H+ ++
Sbjct: 221 VTVGSWNMKADTDAMGFHNLY----SDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESP 276
Query: 304 FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKS 363
F + L KP+ E+ + + +++ Y
Sbjct: 277 F-------------KHSFSNFRLKKPMVIGEFNQEHG----AGMSSESMFEWAYTKGY-- 317
Query: 364 AKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWER 397
+GA W +
Sbjct: 318 -------SGAWTWSRTDVSWNNQLRGMQHLKSRT 344
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 88.5 bits (219), Expect = 2e-19
Identities = 54/381 (14%), Positives = 113/381 (29%), Gaps = 66/381 (17%)
Query: 40 GFVTRNGTHFM-LDGKALYVNG--WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRT 96
G+ +G + + + + G W + ++ VH +ML +G R
Sbjct: 4 GYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRL 63
Query: 97 WAFND--------GGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148
+D N Q++ + +D ++ A + G+R++L
Sbjct: 64 PYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIIL---------- 113
Query: 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208
+ + G + ++ + ++ + R Y+ +PT+
Sbjct: 114 ------DRHRPDCSG---QSALWYTSSVSEATWISDLQALAQR--------YKGNPTVVG 156
Query: 209 WELINEPRCMSDPSGDT----LQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTV 264
++L NEP + + + V S++ L+ V Y S
Sbjct: 157 FDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY----- 211
Query: 265 NPEMWASAL--GSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL--KFVTKWMLSHIE 320
W L + N N S H Y + F D + +
Sbjct: 212 ---WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWG 268
Query: 321 DGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL-- 378
+ PV+ E+G + + + KT++ + +A+ W
Sbjct: 269 YLFNQNIAPVWLGEFGTTL-----QSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNP 323
Query: 379 ---FVEGMEEYNDDFGIVPWE 396
G+ DD+ V
Sbjct: 324 DSGDTGGI--LKDDWQTVDTV 342
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 76.9 bits (188), Expect = 2e-15
Identities = 51/390 (13%), Positives = 111/390 (28%), Gaps = 71/390 (18%)
Query: 40 GFVTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWA 98
++ DG++L + G+N+ A + + + A MG R +
Sbjct: 28 SGTALTPSYLKDDDGRSLILRGFNTASSAKSAPDGMPQFTEADLAREYADMGTNFVR-FL 86
Query: 99 FNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSL--VNNLQAYGGKTQYVNW 156
+ + S++ +PG +D++ ++ + + G +++L + A + N
Sbjct: 87 IS---WRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNG 143
Query: 157 AWEEGIGI--------------SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV---- 198
A G G + ++ P + + F ++ T +
Sbjct: 144 AGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAW 203
Query: 199 -----EYRNDPTIFAWELINEPRCMS----DPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249
+ ++ + A++L+NEP S L + ++ +D+ V V
Sbjct: 204 RAVADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVA 263
Query: 250 LEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL- 308
P+ G +D Y H + D
Sbjct: 264 ----------------PQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPLPLDIGDGH 307
Query: 309 ---------KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDI 359
+ W + + P+ +GL + G + +
Sbjct: 308 EGLARTLTDVTIDAWRANTAHTARVLGDVPIILGSFGLDTTLPGARDYIER-----VYGT 362
Query: 360 VYKSAKRKRSGAGALIWQLFVEGMEEYNDD 389
+ GAG W Y D
Sbjct: 363 ARE------MGAGVSYWSSDPGPWGPYLPD 386
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 1e-11
Identities = 54/324 (16%), Positives = 91/324 (28%), Gaps = 62/324 (19%)
Query: 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR----TW 97
+ T L G VN W + +H VH + ML +G R T
Sbjct: 54 TSGEETPIHLFG----VN-WFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTE 108
Query: 98 AFNDGGYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154
+ G +P + ++ +I +A G+ +LL + G
Sbjct: 109 SVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLL----DYHRIGCTHIEP 164
Query: 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE 214
W + + + F + V R + + +L NE
Sbjct: 165 LW---------------YTEDFSEEDFINTWIEVAKR--------FGKYWNVIGADLKNE 201
Query: 215 PRCMSDPS-------------GDTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKS 258
P ++ P G+ DW K+I L+ V F PK+
Sbjct: 202 PHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPHWLIFVEGTQFTNPKT 261
Query: 259 PKRLTVNPEMWASA---LGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKW- 314
W D+ N + + + S H++ ++ F F
Sbjct: 262 DSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVY-SPHVFGPDVYNQPYFGPAKGFPDNLP 320
Query: 315 --MLSHIEDGDKELNKPVFFTEYG 336
H EL V E+G
Sbjct: 321 DIWYHHFGYVKLELGYSVVIGEFG 344
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 40/316 (12%), Positives = 97/316 (30%), Gaps = 64/316 (20%)
Query: 97 WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156
+ G++ E +D + +K + L+L ++ G Y
Sbjct: 52 PIIESDD------NVGEYKEDGLSYIDRCLEWCKKYNLGLVL----DMHHAPG---YRFQ 98
Query: 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216
++ + F DP+ K F + + R Y N+ A+EL+N+
Sbjct: 99 DFK--------TSTLFEDPNQQKRFVDIWRFLAKR--------YINEREHIAFELLNQVV 142
Query: 217 CMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG---------LEGFYGPKSPK------- 260
+P + E ++ ID + +G L+
Sbjct: 143 ---EPDSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADIDDDYIVYNFHF 199
Query: 261 ----RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWML 316
T W+ + + + + + + + ++LK + +
Sbjct: 200 YNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLR 259
Query: 317 SHIE---DGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGA 373
++ + ++ ++ E+G+ + R K ++ + ++ + G
Sbjct: 260 KDLKPAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISLL------EEYDIGG 310
Query: 374 LIWQLFVEGMEEYNDD 389
+W E YN+D
Sbjct: 311 AVWNYKKMDFEIYNED 326
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Length = 463 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 2e-07
Identities = 53/309 (17%), Positives = 96/309 (31%), Gaps = 76/309 (24%)
Query: 42 VTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
V+ G + +G + G + L +R L+ + G V + N
Sbjct: 20 VSEEGRYLKHENGTPFFWLGETGWLL----PERLNRDEAEYYLEQCKRRGYNVIQVQTLN 75
Query: 101 DG-------------GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147
+ GYN I+ + + +D++I A K G+ + + + +
Sbjct: 76 NVPSMNIYGQYSMTDGYNFKNINQ-KGVYGYWDHMDYIIRTAAKKGLYIGMVCI-----W 129
Query: 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIF 207
G V+ ++ K Y K + R Y+++P I
Sbjct: 130 GS---PVSHGE-----MNVDQA------------KAYGKFLAER--------YKDEPNII 161
Query: 208 AWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE 267
W + D GD + ++ +K+IDK HL+T P+ T +
Sbjct: 162 -WFI------GGDIRGDVKTAEWEALATSIKAIDKNHLMTF---------HPRGRTTSAT 205
Query: 268 MWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELN 327
+ +A DF F S H F D ++ + +
Sbjct: 206 WFNNAPWLDFNM--------FQSGHRRYGQRFGDGDYPIEENTEEDNWRFVERSMAMKPM 257
Query: 328 KPVFFTEYG 336
KPV E
Sbjct: 258 KPVIDGEPI 266
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 59/354 (16%), Positives = 112/354 (31%), Gaps = 93/354 (26%)
Query: 60 GWN-SYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFD 115
G N L D+ + G + R W+ + + P +
Sbjct: 15 GINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFP-----PYKIM 69
Query: 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDP 175
+R FK +D VI A K G+ +++ N+ Y DP
Sbjct: 70 DRFFKRVDEVINGALKRGLAVVI----NIHHYEE---------------------LMNDP 104
Query: 176 SIHK-YFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMS 234
HK F K + R Y++ P +E++N P + + + + ++E
Sbjct: 105 EEHKERFLALWKQIADR--------YKDYPETLFFEILNAPHG--NLTPEKWNELLEEAL 154
Query: 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIY 294
++SIDKKH + +G + G + ++L+V N ++H Y
Sbjct: 155 KVIRSIDKKHTIIIGTAEWGGISALEKLSVPK---------------WEKNS-IVTIHYY 198
Query: 295 PDH---------------WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
W D + + IE+ K+ +P++ E+G
Sbjct: 199 NPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYR 258
Query: 340 LIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIV 393
+ R K ++ + ++ W E+ FG+
Sbjct: 259 KA---DLESRIKWTSFVVREM------EKRRWSLAYW--------EFCSGFGVY 295
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 6e-07
Identities = 56/349 (16%), Positives = 103/349 (29%), Gaps = 72/349 (20%)
Query: 60 GWN-SYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR----TWAFNDGGYNSLQISPGQF 114
G+N + ++ A+ R ++D G +P
Sbjct: 22 GFNLLEAFSIKSTGNFKEE----DFLWMAQWDFNFVRIPMCHLLWSDRG------NPFII 71
Query: 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFD 174
E F+ +D VI K G+ + + + +A G + + D
Sbjct: 72 REDFFEKIDRVIFWGEKYGIHICI---SLHRAPGY--SVNKE--------VEEKTNLWKD 118
Query: 175 PSIHKYFKHYVKTVLTRKNTITGVEYRN-DPTIFAWELINEPRCMSDPSGDTLQDWIDEM 233
+ + F H+ + R Y+ T ++ LINEP DP +++D +
Sbjct: 119 ETAQEAFIHHWSFIARR--------YKGISSTHLSFNLINEPPF-PDPQIMSVEDHNSLI 169
Query: 234 SAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASA-----LGSDFIRNSNNDN 285
+ I D + L+ + +G P S + D+
Sbjct: 170 KRTITEIRKIDPERLIII--DGLGYGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDS 227
Query: 286 IDFASVHIYPDHWFHDLEFEDDL-KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGF 344
DF F + + L + W+ + VF E G N
Sbjct: 228 KDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLR------QKGIEVFCGEMGAYN---KT 278
Query: 345 EPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIV 393
+ K + +L+I K G +W + FGI+
Sbjct: 279 PHDVVLKWLEDLLEIF------KTLNIGFALW--------NFRGPFGIL 313
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 38/279 (13%), Positives = 81/279 (29%), Gaps = 67/279 (24%)
Query: 81 AMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
AM+ + G R TW + G D+ K ++ + A N + ++
Sbjct: 46 AMINKIKEAGFNTLRLPVTWDGHMGAAP-----EYTIDQTWMKRVEEIANYAFDNDMYVI 100
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
+ NL + + + +
Sbjct: 101 I----NLHHENEWLKPFYANEAQ----------------VKAQLTKVWTQIANN------ 134
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257
++ +E +NEPR + + E V + + + G
Sbjct: 135 --FKKYGDHLIFETMNEPRPV--GASLQWTGGSYENREVVNRYNLTAVNAIRA---TGGN 187
Query: 258 SPKRLTVNPEMWASALG---SDFIRNSNNDNIDFASVHIYPDHWF-HDL----------- 302
+ R + P + ASA+ +D + +N+ + S+H+Y ++F D+
Sbjct: 188 NATRYIMVPTLAASAMSTTINDLVIPNNDSKV-IVSLHMYSPYFFAMDINGTSSWGSDYD 246
Query: 303 --EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
+ + V + + + V E G N
Sbjct: 247 KSSLDSEFDAVYNKFVKN--------GRAVVIGEMGSIN 277
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 2e-06
Identities = 38/316 (12%), Positives = 79/316 (25%), Gaps = 94/316 (29%)
Query: 27 GGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAG 86
G VS NG F++ G ++H Y + ++
Sbjct: 8 SGFYVSGTT-----LYDANGNPFVMRG-------------INHGHAWYKD-QATTAIEGI 48
Query: 87 AKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146
A G R +DGG + + + + ++I A N + +L +
Sbjct: 49 ANTGANTVRI-VLSDGGQ---------WTKDDIQTVRNLISLAEDNNLVAVL----EVHD 94
Query: 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206
G Y + A Y + +
Sbjct: 95 ATG---YDSIASLN-------------------RAVDYWIEMRSA--------LIGKEDT 124
Query: 207 FAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLT 263
+ NE D + W D + + + + + G+
Sbjct: 125 VIINIANEWFGSWDGA-----AWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQ----- 174
Query: 264 VNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGD 323
G + N F S+H+Y + + ++ +L+
Sbjct: 175 -----SIHDYGREVFNADPQRNTMF-SIHMYEYAGGNASQVRTNI----DRVLNQ----- 219
Query: 324 KELNKPVFFTEYGLSN 339
+ + E+G +
Sbjct: 220 ---DLALVIGEFGHRH 232
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 2e-06
Identities = 44/280 (15%), Positives = 80/280 (28%), Gaps = 53/280 (18%)
Query: 81 AMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
M+ A + G R +W + G S + + + V+ N + ++
Sbjct: 65 QMIDAIKQKGFNTVRIPVSWHPHVSG------SDYKISDVWMNRVQEVVNYCIDNKMYVI 118
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
L+ ++ +G SS S KY + R
Sbjct: 119 LNTHHD------------VDKVKGYFPSSQYM-----ASSKKYITSVWAQIAAR------ 155
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257
+ N +E +NEPR + + + ++ + I++ + V G K
Sbjct: 156 --FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGK 213
Query: 258 SPKRLTV-------NPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKF 310
+ R + + NN+ I SVH Y F L D
Sbjct: 214 NASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKI-IVSVHAYCPWNFAGLAMADGGTN 272
Query: 311 VT-----------KWMLSHIEDGDKELNKPVFFTEYGLSN 339
W + +I + PV E G +
Sbjct: 273 AWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVD 312
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 30/248 (12%), Positives = 65/248 (26%), Gaps = 63/248 (25%)
Query: 98 AFNDGGYNS--LQISPG-QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154
G N+ + +S G ++ + + +VI ++N + +L
Sbjct: 40 DIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICML---------------- 83
Query: 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE 214
G G S + Y + + + + + NE
Sbjct: 84 EVHDTTGYGEQSGASTL-------DQAVDYWIELKSV--------LQGEEDYVLINIGNE 128
Query: 215 PRCMSDPSGDTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWAS 271
P T+ W + SA ++ + +H + V + +
Sbjct: 129 P---YGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQ---------DWTNTMR 176
Query: 272 ALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVF 331
+ N F S+H+Y + L+ P+
Sbjct: 177 NNADQVYASDPTGNTVF-SIHMYGVYSQAS-TITSYLEHFVNA------------GLPLI 222
Query: 332 FTEYGLSN 339
E+G +
Sbjct: 223 IGEFGHDH 230
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 5e-06
Identities = 48/358 (13%), Positives = 98/358 (27%), Gaps = 102/358 (28%)
Query: 60 GWN-SYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118
G N L + + + G R + S + P + D+
Sbjct: 23 GINMGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVR-IPIRWSAHISEK-YPYEIDKFF 80
Query: 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIH 178
+ HV+ A KN + +++ N E + +
Sbjct: 81 LDRVKHVVDVALKNDLVVII----------------NCHHFEEL--------YQAPDKYG 116
Query: 179 KYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVK 238
K V +++ P +E+ NEP + + + ++ ++
Sbjct: 117 PVLVEIWKQVAQA--------FKDYPDKLFFEIFNEPAQ--NLTPTKWNELYPKVLGEIR 166
Query: 239 SIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHW 298
+ +V + W++ ++ ++ NI S H Y
Sbjct: 167 KTNPSRIVIID----------------VPNWSNYSYVRELKLVDDKNIIV-SFHYYEPFN 209
Query: 299 FHDL-----------------------EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEY 335
F + + K+V++W + N P+F E+
Sbjct: 210 FTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKYVSEWAKKN--------NVPIFLGEF 261
Query: 336 GLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIV 393
G + + R K KT+ I + G W E+ FG+
Sbjct: 262 GAYSKA---DMESRVKWTKTVRRIA------EEFGFSLAYW--------EFCAGFGLY 302
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 9e-06
Identities = 29/249 (11%), Positives = 68/249 (27%), Gaps = 72/249 (28%)
Query: 97 WAFNDGGYNS--LQISPGQF----DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK 150
W +D G N + D V + + + A + +++ +
Sbjct: 51 WLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVII----DWHILSDN 106
Query: 151 TQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE 210
+ K + + Y + P + +E
Sbjct: 107 DPNIYKE----------------------EAKDFFDEMSEL--------YGDYPNVI-YE 135
Query: 211 LINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWA 270
+ NEP G+ ++ + +E+ +++ D +++ VG W+
Sbjct: 136 IANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVG----------------TGTWS 179
Query: 271 SALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPV 330
+ + N+ + H Y H D + + +
Sbjct: 180 QDVHHAADNQLADPNV-MYAFHFYAG--THGQNLRDQVDYALDQ------------GAAI 224
Query: 331 FFTEYGLSN 339
F +E+G S
Sbjct: 225 FVSEWGTSA 233
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 35/249 (14%), Positives = 78/249 (31%), Gaps = 73/249 (29%)
Query: 97 WAFNDGGYNS--LQISPGQ----FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK 150
W +D G + + V + + A++ G+ +++
Sbjct: 76 WLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVII------------ 123
Query: 151 TQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE 210
+W + + + ++FK Y N P + +E
Sbjct: 124 ----DWHILNDGNPNQNKEKAK------EFFKEMSS------------LYGNTPNVI-YE 160
Query: 211 LINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWA 270
+ NEP + D ++ + +E+ + ++ D +++ VG W+
Sbjct: 161 IANEPNGDVNWKRD-IKPYAEEVISVIRKNDPDNIIIVG----------------TGTWS 203
Query: 271 SALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPV 330
+ + N+ + ++H Y H D + LS P+
Sbjct: 204 QDVNDAADDQLKDANVMY-ALHFYA--GTHGQFLRDKAN----YALSK--------GAPI 248
Query: 331 FFTEYGLSN 339
F TE+G S+
Sbjct: 249 FVTEWGTSD 257
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 38/291 (13%), Positives = 80/291 (27%), Gaps = 67/291 (23%)
Query: 81 AMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
+++ G R ++ N G + + V+ A G+ ++
Sbjct: 73 ELIKKVKAAGFKSIRIPVSYLNNIGSAP-----NYTINAAWLNRIQQVVDYAYNEGLYVI 127
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
+ N+ G + W + +I + +K + + T+
Sbjct: 128 I----NIHGDGYNSVQGGWLL----------VNGGNQTAIKEKYKKVWQQIATK------ 167
Query: 198 VEYRNDPTIFAWELINEPRCM--SDPSGDTLQDWIDEMSAFVKSI------DKKHLVTVG 249
+ N +E +NE +P+ + FV ++ + + V
Sbjct: 168 --FSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVP 225
Query: 250 -----------LEGFYGPKSPKRLTVNPEMWASALGS-------DFIRNSNNDNIDFASV 291
GF P R + P + S DF N + + +
Sbjct: 226 GWNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGAT 285
Query: 292 HIYP---DHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
P W + E K + ++ PV E+G +
Sbjct: 286 STNPAKKSTWGQEDYLESQFKSMYDKFVTQ--------GYPVVIGEFGSID 328
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 13/159 (8%)
Query: 87 AKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146
+ GL+ R + + L+ PG+ + + LD I G++++L
Sbjct: 24 REAGLSHVRIG---EFAWALLEPEPGRLE---WGWLDEAIATLAAEGLKVVLGTPTATPP 77
Query: 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206
+Y + G ++ + R T+ Y +
Sbjct: 78 KWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEAR----RIVTLLAERYGGLEAV 133
Query: 207 FAWELINEPRCMS---DPSGDTLQDWIDEMSAFVKSIDK 242
++ NE C + + + A +I+
Sbjct: 134 AGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEA 172
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 2e-05
Identities = 39/316 (12%), Positives = 77/316 (24%), Gaps = 94/316 (29%)
Query: 27 GGLNVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAG 86
G V NG F++ G +N ++++ + + A
Sbjct: 23 SGFYVDGNT-----LYDANGQPFVMKG----INHGHAWY----------KDTASTAIPAI 63
Query: 87 AKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146
A+ G R +DGG +++ + VI A +N + ++ + + A
Sbjct: 64 AEQGANTIRI-VLSDGGQ---------WEKDDIDTVREVIELAEQNKMVAVVEVHD---A 110
Query: 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206
G ++ Y +
Sbjct: 111 TGRDSRSDLD-----------------------RAVDYWIEMKDA--------LIGKEDT 139
Query: 207 FAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLT 263
+ NE D + W D + + H + V G+
Sbjct: 140 VIINIANEWYGSWDGA-----AWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQ----- 189
Query: 264 VNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGD 323
G D N F S+H+Y ++ V
Sbjct: 190 -----SIHDYGQDVFNADPLKNTIF-SIHMYEYAGGDANTVRSNIDRVIDQ--------- 234
Query: 324 KELNKPVFFTEYGLSN 339
+ + E+G +
Sbjct: 235 ---DLALVIGEFGHRH 247
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 19/144 (13%), Positives = 32/144 (22%), Gaps = 31/144 (21%)
Query: 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYG 255
+ NE D S W D + + H + V G+
Sbjct: 109 ALIGKEDTVIINIANEWYGSWDGS-----AWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ 163
Query: 256 PKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWM 315
G D N F S+H+Y ++ V
Sbjct: 164 YPQ----------SIHDYGQDVFNADPLKNTMF-SIHMYEYAGGDANTVRSNIDRVIDQ- 211
Query: 316 LSHIEDGDKELNKPVFFTEYGLSN 339
+ + E+G +
Sbjct: 212 -----------DLALVIGEFGHRH 224
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 60/415 (14%), Positives = 113/415 (27%), Gaps = 115/415 (27%)
Query: 30 NVSYPKEPEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDH---AVHDYSRARVGAMLQAG 86
N + K V+R + L +AL L + G +L +G
Sbjct: 123 NQVFAK----YNVSRLQPYLKLR-QALLE-------LRPAKNVLID-------G-VLGSG 162
Query: 87 AKMGLT--VCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNL 144
K + VC ++ + D ++F + N +L ++ L
Sbjct: 163 -KTWVALDVCLSYKVQC-----------KMDFKIF-----WLNLKNCNSPETVLEMLQKL 205
Query: 145 --QAYGGKTQYVNWAWEEGIGISSSND--SFFF----------------DPSIHKYFKHY 184
Q T + + + I S + F
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 185 VKT-VLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ-DWID-EMSAFVKSID 241
K + TR +T ++ + T L + ++ +L ++D + +
Sbjct: 266 CKILLTTRFKQVT--DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFA---SV-HIYPD- 296
+ + + + + W D ++ N D + S+ + P
Sbjct: 324 TTNPRRLSIIA-------ESIRDGLATW------DNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 297 --HWFHDLE-FEDDLKFVTK-----WMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSL 348
F L F T W D +NK +Y L + K
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK---LHKYSL--VEKQ----- 420
Query: 349 RDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN-------DDFGIVPWE 396
+ +I I Y K K AL + ++ YN DD +
Sbjct: 421 PKESTISIPSI-YLELKVKLENEYALHRSI----VDHYNIPKTFDSDDLIPPYLD 470
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Length = 613 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 31/136 (22%)
Query: 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK 260
+N P + W + NEP + +G ++ + A KS+D P
Sbjct: 418 KNHPAVVMWSVANEPASHLESAGY----YLKMVIAHTKSLD-----------------PS 456
Query: 261 RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320
R S++ + +D ++ Y W+HD L+ + + + E
Sbjct: 457 RPVT------FVSNSNYAADKGAPYVDVICLNSYYS-WYHDY---GHLELIQLQLATQFE 506
Query: 321 DGDKELNKPVFFTEYG 336
+ K+ KP+ +EYG
Sbjct: 507 NWYKKYQKPIIQSEYG 522
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 1e-04
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 34/141 (24%)
Query: 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKS 258
+Y N P + +E+ NEP +T++ + + + + +++ID +L+ VG
Sbjct: 119 KYGNKPNVI-YEIYNEPL--QVSWSNTIKPYAEAVISAIRAIDPDNLIIVG--------- 166
Query: 259 PKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSH 318
W+ + N NI + ++H Y H + +
Sbjct: 167 -------TPSWSQNVDEASRDPINAKNIAY-TLHFYA--GTHGESLRNKARQALNN---- 212
Query: 319 IEDGDKELNKPVFFTEYGLSN 339
+F TE+G N
Sbjct: 213 --------GIALFVTEWGTVN 225
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Length = 605 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 29/136 (21%)
Query: 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK 260
+N P++ W + NEP + + + ++ + +D P
Sbjct: 402 KNHPSVVMWSIANEPDTRPQGARE----YFAPLAEATRKLD-----------------PT 440
Query: 261 RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320
R + + D ++ +D D ++ Y W+ DL+ K + +
Sbjct: 441 RPI----TCVNVMFCDAHTDTISDLFDVLCLNRYYG-WYVQ---SGDLETAEKVLEKELL 492
Query: 321 DGDKELNKPVFFTEYG 336
++L++P+ TEYG
Sbjct: 493 AWQEKLHQPIIITEYG 508
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 2e-04
Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 53/272 (19%)
Query: 81 AMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
M + V R TW+ + G + DE+ K + V+ KNG ++
Sbjct: 66 DMFKVLIDNQFNVFRIPTTWSGHFGEAP-----DYKIDEKWLKRVHEVVDYPYKNGAFVI 120
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
L N E S D + K + +
Sbjct: 121 L----------------NLHHETWNHAFSETL----DTAKEILEKIW---------SQIA 151
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257
E+++ +E +NEPR DT +W +++ + V + G
Sbjct: 152 EEFKDYDEHLIFEGLNEPRK-----NDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGN 206
Query: 258 SPKRLTVNPEMWAS---ALGSDFIRNSNNDNIDFASVHIYPDHWFHDLE-------FEDD 307
+PKR + P A+ ++FI ++D + ASVH Y + F F+
Sbjct: 207 NPKRHLMIPPYAAACNENSFNNFIFPEDDDKV-IASVHAYAPYNFALNNGEGAVDKFDAA 265
Query: 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
K +W ++ ++ + P+ EYG N
Sbjct: 266 GKRDLEWNINLMKKRFVDQGIPMILGEYGAMN 297
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 34/140 (24%)
Query: 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP 259
Y + +E+ NEP +S + ++ + + + +++ID +L+ VG
Sbjct: 122 YGQYDNVI-YEIYNEPLQISWV--NDIKPYAETVIDKIRAIDPDNLIVVG---------- 168
Query: 260 KRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 319
W+ + +N + ++H Y H + +
Sbjct: 169 ------TPTWSQDV-DVASQNPIDRANIAYTLHFYA--GTHGQSYRNKA----------- 208
Query: 320 EDGDKELNKPVFFTEYGLSN 339
+ +F TE+G N
Sbjct: 209 -QTALDNGIALFATEWGTVN 227
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Length = 667 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 32/181 (17%), Positives = 51/181 (28%), Gaps = 48/181 (26%)
Query: 158 WEE--GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEP 215
W E +G D F D F+ K L I ++ N P+I W L NE
Sbjct: 344 WAEIPFVGPGGYADKGFVD---QASFRENGKQQL--IELIR--QHYNHPSICFWGLFNEL 396
Query: 216 RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275
GD +++ E++A K D T
Sbjct: 397 ----KEVGDNPVEYVKELNALAKQEDPTRPTTSASNQDGNL------------------- 433
Query: 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEY 335
N + + + Y W+ + F+ + H + +EY
Sbjct: 434 -------NFITENIAWNRYDG-WYGS-TPKTLATFLDRTHKKH-------PELRIGISEY 477
Query: 336 G 336
G
Sbjct: 478 G 478
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Length = 503 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 4e-04
Identities = 44/321 (13%), Positives = 86/321 (26%), Gaps = 44/321 (13%)
Query: 81 AMLQAGAKMGLTVCRT-WAFND--GGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
+ K+G R +D G Y ++I F +D ++ +R
Sbjct: 38 HLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYNFTYIDRIVDSYLALNIRPF 97
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
+ ++ A G P + ++ + V++ G
Sbjct: 98 IE-----------FGFMPKALASGDQTVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYG 146
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKH-LVTVGLEGFYGP 256
+E W NEP ++ Q++ +++ + VG G
Sbjct: 147 IEEVRTWLFEVW---NEPNLVNFWKDANKQEYFKLYEVTARAVKSVDPHLQVGGPAICGG 203
Query: 257 KSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD---------LEFEDD 307
+ +DF S H Y H LE +D
Sbjct: 204 SDEW----ITDFLHFCAE-------RRVPVDFVSRHAYTSKAPHKKTFEYYYQELEPPED 252
Query: 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRK 367
+ K + + I + P+ TEY S + D + +
Sbjct: 253 MLEQFKTVRALIRQSPFP-HLPLHITEYNTSY---SPINPVHDTALNAAY--IARILSEG 306
Query: 368 RSGAGALIWQLFVEGMEEYND 388
+ + F + EE +
Sbjct: 307 GDYVDSFSYWTFSDVFEEMDV 327
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Length = 692 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 36/137 (26%)
Query: 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP 259
N P+I+ W L NE + + K+ D P
Sbjct: 386 SFNHPSIYVWGLHNEV----YQPHEYTAALTRSLHDLAKTED-----------------P 424
Query: 260 KRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 319
R TV S G + + N N D ++ Y W+ + +D +V + +
Sbjct: 425 DRYTV------SVNGYGHMDHPVNLNADIQGMNRYF-GWYEK-KIQDIKPWVEQLEKDYP 476
Query: 320 EDGDKELNKPVFFTEYG 336
+ + TEYG
Sbjct: 477 -------YQKLMLTEYG 486
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 430 | |||
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 100.0 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 100.0 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 100.0 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 100.0 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 100.0 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.97 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 99.97 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 99.97 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 99.97 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.97 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 99.96 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.96 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 99.96 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 99.96 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 99.96 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 99.96 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 99.96 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 99.95 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.95 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.95 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 99.95 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 99.95 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 99.94 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 99.94 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 99.94 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.94 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 99.93 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 99.93 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.93 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.93 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 99.92 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.92 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 99.92 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 99.91 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.9 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.9 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.9 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.9 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.89 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.89 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.89 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.89 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.89 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.88 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.88 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.88 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.88 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.87 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.87 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.87 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.87 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.86 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.86 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 99.86 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 99.86 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.85 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 99.85 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 99.85 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 99.84 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 99.84 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.84 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 99.84 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 99.83 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.83 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 99.83 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 99.83 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.83 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.82 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 99.82 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.82 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 99.82 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 99.82 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 99.82 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 99.82 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 99.81 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.81 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.81 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 99.81 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.8 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.8 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.79 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.78 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.76 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.73 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.71 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.68 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.67 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 99.67 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.65 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 99.65 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.64 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.61 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.59 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 99.58 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.57 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.56 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 99.55 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 99.55 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.55 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.53 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 99.52 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.51 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.5 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 99.49 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 99.49 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 99.46 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 99.42 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 99.4 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 99.3 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 99.29 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.18 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 99.1 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 99.03 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.72 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.68 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 98.67 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.62 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 98.49 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.47 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.46 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 98.43 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.38 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.32 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 98.31 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 98.27 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 98.11 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 98.05 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 98.01 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 98.0 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 97.92 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 97.91 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 97.76 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 97.73 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 97.4 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 97.29 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 97.16 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 97.15 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 97.09 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 96.97 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 96.34 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.1 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 96.03 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 95.99 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 95.98 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 95.96 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 95.96 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 95.81 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 95.49 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 95.45 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 95.22 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 95.2 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 95.1 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 94.79 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 94.78 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 94.78 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 94.35 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 94.16 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 93.87 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 93.45 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 93.24 | |
| 1jak_A | 512 | Beta-N-acetylhexosaminidase; glycoside hydrolase, | 93.23 | |
| 1yht_A | 367 | DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact | 92.97 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 92.35 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 91.95 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 91.93 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 91.88 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 91.74 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 91.39 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 91.28 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 91.2 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 90.87 | |
| 2v5c_A | 594 | O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol | 90.74 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 89.88 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 89.87 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 89.68 | |
| 3gza_A | 443 | Putative alpha-L-fucosidase; NP_812709.1, structur | 89.55 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 89.51 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 89.29 | |
| 2v5d_A | 737 | O-GLCNACASE NAGJ; family 32 carbohydrate binding m | 89.27 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 88.95 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 88.79 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 88.79 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 88.55 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 88.5 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 88.38 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 88.37 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 88.2 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 87.98 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 87.96 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 87.85 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 87.81 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 87.46 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 87.44 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 87.34 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 87.33 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 87.18 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 87.07 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 87.0 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 86.96 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 86.88 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 86.69 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 86.27 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 86.12 | |
| 4ac1_X | 283 | Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g | 85.64 | |
| 3gh5_A | 525 | HEX1, beta-hexosaminidase; beta-N-acetylhexosamini | 85.54 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 85.36 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 84.97 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 84.8 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 84.8 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 84.46 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 84.43 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 84.31 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 84.21 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 84.08 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 84.0 | |
| 3n12_A | 333 | Chitinase A, chinctu2; zinc atoms, complex, hydrol | 83.81 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 83.8 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 83.73 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 83.39 | |
| 2epl_X | 627 | N-acetyl-beta-D-glucosaminidase; glycoside hydrola | 83.24 | |
| 2p10_A | 286 | MLL9387 protein; putative phosphonopyruvate hydrol | 83.0 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 82.71 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 82.62 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 82.35 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 82.02 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 81.62 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 81.48 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 80.94 | |
| 1gqi_A | 708 | Alpha-glucuronidase; (alpha-beta)8 barrel, glycosi | 80.89 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 80.87 | |
| 1now_A | 507 | Beta-hexosaminidase beta chain; (beta/alpha)8-barr | 80.47 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 80.26 | |
| 2yl5_A | 442 | Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Str | 80.14 |
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-65 Score=513.37 Aligned_cols=343 Identities=35% Similarity=0.638 Sum_probs=287.0
Q ss_pred EeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCC------CCccccCCCCCC--
Q 014151 44 RNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGG------YNSLQISPGQFD-- 115 (430)
Q Consensus 44 ~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~------~~~~~~~pg~~d-- 115 (430)
++|++|++|||||+|.|+|.||+... +.+.++++|+.|+++|+|+||+|+|+++. |+.+|+.||.|+
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~-----~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~ 89 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYK-----SNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVP 89 (383)
T ss_dssp ------------CCEEEEECSCTTTS-----CHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSC
T ss_pred ccCCEEEECCEEEEEEEEEecccccC-----CHHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCccccc
Confidence 68999999999999999999998864 47899999999999999999999998754 667899999999
Q ss_pred ------hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 014151 116 ------ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVL 189 (430)
Q Consensus 116 ------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv 189 (430)
++.|+.||++|++|+++||+|||+|++.|..+||.+.|+.|.. . ..+..||+||++++.++++++.|+
T Consensus 90 ~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~g---~---~~~~~f~~dp~~~~~~~~~~~~l~ 163 (383)
T 3pzg_A 90 EGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFG---G---THHDDFYRDERIKEEYKKYVSFLI 163 (383)
T ss_dssp TTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHTT---C---CSTTHHHHCHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCccchhhhcC---C---CccccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998999988988863 1 335679999999999999999999
Q ss_pred hccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccch
Q 014151 190 TRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMW 269 (430)
Q Consensus 190 ~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w 269 (430)
+|+|||||++|+++|+|++|+|+|||.+....+.+.+.+|+++|+++||++||+|||++|++|+++.+.+.........|
T Consensus 164 ~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~ 243 (383)
T 3pzg_A 164 NHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEW 243 (383)
T ss_dssp TCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGG
T ss_pred hhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEEEcccccccccccccccCCCCcc
Confidence 99999999999999999999999999987654567899999999999999999999999999998865542211112357
Q ss_pred hh--ccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChh
Q 014151 270 AS--ALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPS 347 (430)
Q Consensus 270 ~~--~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~ 347 (430)
.+ ..|.||.+.++++.|||+++|.||++|.. +.+..++|..+||++|++.+++ .+|||+|+|||..... .+
T Consensus 244 ~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~w~~--~~~~~~~~~~~wi~~h~~~a~~-~gKPvv~eEfG~~~~~----~~ 316 (383)
T 3pzg_A 244 AYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGV--SPENYAQWGAKWIEDHIKIAKE-IGKPVVLEEYGIPKSA----PV 316 (383)
T ss_dssp GTBTTTSCCHHHHHTCTTCCSEEEEECHHHHTC--CGGGHHHHHHHHHHHHHHHHHH-HTCCEEEEEECCCTTS----SS
T ss_pred ccccccCCChHhhcCCCCCCEEEEEecccccCc--ChHHHHHHHHHHHHHHHHHHHh-cCCCEEEEecCCCCCC----hh
Confidence 64 47899999999999999999999999974 3445678999999999999986 9999999999998753 46
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCC---------ccCCCCceEEcCCCccHHHHHHHHHHH
Q 014151 348 LRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGM---------EEYNDDFGIVPWERTSTYKLLTEQSCG 410 (430)
Q Consensus 348 ~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~---------~~~~dg~~i~~~~~~~~~~~~~~~~~~ 410 (430)
.|+++++.+++.++++ +.+|+++|+|.+.+. ...+|||+|+.+ ++++..||++|+++
T Consensus 317 ~r~~~~~~~~~~~~~~-----~~~g~~~Wq~~~~~~g~~~~~~~~~~~~dg~~i~~~-~~~~~~~~~~~~~~ 382 (383)
T 3pzg_A 317 NRTAIYRLWNDLVYDL-----GGDGAMFWMLAGIGEGSDRDERGYYPDYDGFRIVND-DSPEAELIREYAKL 382 (383)
T ss_dssp CHHHHHHHHHHHHHHT-----TCCEEEESCBCCBCBTTBCCTTSBCCCSSSCCBCSS-SSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh-----CCcceEEEEecCcCCCCcCCCCCcccCCCCeEEEeC-CccHHHHHHHHHhh
Confidence 7999999999988764 468999999998633 224599999997 57899999999986
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-63 Score=497.38 Aligned_cols=371 Identities=43% Similarity=0.843 Sum_probs=315.2
Q ss_pred CCCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChH
Q 014151 38 EMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDER 117 (430)
Q Consensus 38 ~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~ 117 (430)
..|||+++|++|++||||++++|+|.||+...+.++.+.+.++++|+.||++|+|+||+|+|+++.|..++++||.|+++
T Consensus 3 ~~g~v~v~g~~~~~nG~p~~~~G~n~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~ 82 (373)
T 1rh9_A 3 NNNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQ 82 (373)
T ss_dssp -CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHH
T ss_pred CCCcEEEeCCEEEECCEEEEEEEEccccccccccCCccHHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHH
Confidence 46899999999999999999999999988664434456889999999999999999999998887798999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccc
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg 197 (430)
.++.||++|++|+++||+||++|++.|.++||.+.|+.|....|..+ .....||++++.++.++++++.|++|+|||||
T Consensus 83 ~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg 161 (373)
T 1rh9_A 83 MFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKL-TSDDDFFTNPMVKGFYKNNVKVVLTRVNTITK 161 (373)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCC-CCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHhhcCCCC-CchhhcccCHHHHHHHHHHHHHHHhccCccCC
Confidence 99999999999999999999999998988899888999987666544 34467899999999999999999999999999
Q ss_pred ccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcch
Q 014151 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDF 277 (430)
Q Consensus 198 ~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df 277 (430)
++||+||+|++|+|+|||.+......+.+.+|+++++++||++||+|+|++|.+|+++...+ ..+|..| ..|.++
T Consensus 162 ~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~g~~~~~~~---~~~~~~~--~~~~d~ 236 (373)
T 1rh9_A 162 VAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMR---QYNPNSY--IFGTNF 236 (373)
T ss_dssp SBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGG---GGSGGGC--CCSCCH
T ss_pred ccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhhCCCceEEeCcccccCCCCC---cCCcccc--ccccch
Confidence 99999999999999999998654345788999999999999999999999998877653211 1134445 245566
Q ss_pred hhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHH
Q 014151 278 IRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTIL 357 (430)
Q Consensus 278 ~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~ 357 (430)
......+.+||+++|.|++.|.+..+.+...++...|+..+++.+++ .+||++|+|||......+.+++.|..+++.++
T Consensus 237 ~~~~~~~~~D~~s~H~Y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~ 315 (373)
T 1rh9_A 237 ISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKM-LKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIY 315 (373)
T ss_dssp HHHHTSTTCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHH-HTSCEEEEECCCCTTSTTCCHHHHHHHHHHHH
T ss_pred hhhccCCCcCeEEEeeCCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEecCCCCCCCCCCHHHHHHHHHHHH
Confidence 65556788999999999987765444444456777788877776654 79999999999988765667889999999999
Q ss_pred HHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCCCccHHHHHHHHHHHHhhcc
Q 014151 358 DIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 358 ~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~~~~~~~~~~~~~~~~~~~~ 415 (430)
+.+.++++++.++.|+++|+|.+++.+.|.|||+|++++++++.+||++|+++|..|+
T Consensus 316 ~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~d~f~i~~~~~~~~~~~~~~~~~~~~~~~ 373 (373)
T 1rh9_A 316 GTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 373 (373)
T ss_dssp HHHHHHHHTTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhcCCCceeEeeeecCCCCCCCCCCCcEEEcCCChhHHHHHHHHHHHhhccC
Confidence 8888777665568999999999998877889999999888889999999999998763
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-57 Score=463.47 Aligned_cols=362 Identities=26% Similarity=0.433 Sum_probs=288.9
Q ss_pred CCCCcEEEeCCeEEECCeEEEEEeeeccccccccC--CCCCHHHHHHHHHHHHHcCCCEEEEccccCC-------CCCcc
Q 014151 37 PEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWAFNDG-------GYNSL 107 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g-------~~~~~ 107 (430)
++.|||+++|++|++||||++++|+|.||...... ...+.+.++++|+.||++|+|+||++ +.++ .|+.+
T Consensus 20 ~~~gfv~v~g~~f~~nG~p~~~~G~N~~~~~~~~~~~~~~~~~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~ 98 (440)
T 1uuq_A 20 AHEHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAV 98 (440)
T ss_dssp --CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCS
T ss_pred CCCCCEEeeCCEEEECCeEEEEEeEccCchhhhccCcccCCHHHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccc
Confidence 46799999999999999999999999887765432 22478999999999999999999998 4432 25678
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCC----------CCCCCCCCHHH
Q 014151 108 QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISS----------SNDSFFFDPSI 177 (430)
Q Consensus 108 ~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~----------~~~~f~~d~~~ 177 (430)
++.||.|+++.|+.||++|++|+++||+||++|+++|..+||++.|+.|....+.++.. ....||+++++
T Consensus 99 ~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 178 (440)
T 1uuq_A 99 TNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKA 178 (440)
T ss_dssp BSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchhhHHHhccCCCCCCcccccccchhhhhhhhccCHHH
Confidence 89999999999999999999999999999999999998899999999997532211100 01468999999
Q ss_pred HHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCc
Q 014151 178 HKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF 253 (430)
Q Consensus 178 ~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~ 253 (430)
++.++++++.|++|+|||||++||+||+|++|+|+|||.+.... +.+.+.+|+++|+++||++||+|||++|.+|+
T Consensus 179 ~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~ 258 (440)
T 1uuq_A 179 QQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGE 258 (440)
T ss_dssp HHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSG
T ss_pred HHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcccccchHHHHHHHHHHHHHHHhhCCCCeEEECCccc
Confidence 99999999999999999999999999999999999999986421 34678999999999999999999999998877
Q ss_pred cCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCc--c----hhhhHHHHHHHHHHHHHhhhhcCC
Q 014151 254 YGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDL--E----FEDDLKFVTKWMLSHIEDGDKELN 327 (430)
Q Consensus 254 ~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~--~----~~~~~~~~~~~l~~~~~~a~~~~g 327 (430)
++...+ . ..|......+.+||+++|.|++.|.... . .+....+...|+..+++.+++ .+
T Consensus 259 ~~~~~~--------~------~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~ 323 (440)
T 1uuq_A 259 MGSVND--------M------QVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQ-LN 323 (440)
T ss_dssp GGTTTC--------H------HHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred cCCCCc--------c------hhhHHhccCCCCCEEEEEeCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 653211 0 1344445678899999999998775321 1 112235677788888777765 89
Q ss_pred CcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCcc-----C-------CC---
Q 014151 328 KPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEE-----Y-------ND--- 388 (430)
Q Consensus 328 kPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~-----~-------~d--- 388 (430)
|||+|+|||..... .+.+++.|++|++.+++.++++++.++.++|.++|+|.+.+.+. | +|
T Consensus 324 kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~d~~~~~~~~~~~~~g~d~~~d~~~ 403 (440)
T 1uuq_A 324 KPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQ 403 (440)
T ss_dssp CCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTT
T ss_pred CCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEeeecCCCCcccccccccCCccccCCccc
Confidence 99999999998753 13467899999999998888776655568999999999764431 1 12
Q ss_pred ---CceEEcCCCccHHHHHHHHHHHHhhc
Q 014151 389 ---DFGIVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 389 ---g~~i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
|+.++..+++++.++|++++++|..+
T Consensus 404 ~~~G~~~~~~~~~~~~~~i~~~~~~~~~~ 432 (440)
T 1uuq_A 404 EEQGMYGVFDTDTSTIAIMKEFNARFQPK 432 (440)
T ss_dssp SCTTSSCEETTCHHHHHHHHHHHHHHCC-
T ss_pred ccCCcccccCCChHHHHHHHHHHHhcCcc
Confidence 67777776778999999999998876
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=391.05 Aligned_cols=342 Identities=33% Similarity=0.584 Sum_probs=263.5
Q ss_pred CCCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcc--------cc
Q 014151 38 EMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL--------QI 109 (430)
Q Consensus 38 ~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~--------~~ 109 (430)
+.|||+|+|++|++||+||+|.|+|.||++.. +.++++++|+.|+++|+|+||+|.++++..... +.
T Consensus 3 p~GFv~~~g~~f~~nG~~~~~~G~N~~~~~~~-----~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~ 77 (387)
T 4awe_A 3 PKGFVTTEGDHFKLDGKDFYFAGSNAYYFPFN-----DQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNE 77 (387)
T ss_dssp --CCCEEETTEEEETTEECCEEEEECTTGGGS-----CHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCC
T ss_pred CCcCEEEECCEEEECCEEEEEEEEccCcCCCC-----CHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhcc
Confidence 46899999999999999999999999997754 489999999999999999999998765421110 00
Q ss_pred -------------CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHH
Q 014151 110 -------------SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPS 176 (430)
Q Consensus 110 -------------~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~ 176 (430)
.+..+++..++.+|+++++|+++||+||+++++.|..++|.+.|..|... .....||+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~ 151 (387)
T 4awe_A 78 GAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIVALTNNWADYGGMDVYTVNLGG------KYHDDFYTVPK 151 (387)
T ss_dssp TTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEEECCBSSSTTCCHHHHHHHTTC------CSTTHHHHCHH
T ss_pred ccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEEeecccccccCCCccccccccc------ccccccccCHH
Confidence 12234456788999999999999999999999999888888888777531 34567899999
Q ss_pred HHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC-----------CChHHHHHHHHHHHHHHHhcCCCCE
Q 014151 177 IHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD-----------PSGDTLQDWIDEMSAFVKSIDKKHL 245 (430)
Q Consensus 177 ~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~-----------~~~~~~~~w~~~~~~~Ir~~dp~~l 245 (430)
.++.++++++.+++| ||++|+|++|+|.|||.+... ...+.+..|+++++++||++||+||
T Consensus 152 ~~~~~~~~~~~~~~r--------~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp~~l 223 (387)
T 4awe_A 152 IKEAFKRYVKAMVTR--------YRDSEAILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDGNHL 223 (387)
T ss_dssp HHHHHHHHHHHHHHH--------HTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHHhh--------cCCCcceeEeccCCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999 999999999999999987643 1357889999999999999999999
Q ss_pred EEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhc
Q 014151 246 VTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKE 325 (430)
Q Consensus 246 V~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~ 325 (430)
|++|.+++++...+.. ...+......++......+.+|++++|.|++.|... ..+...++..+...+..
T Consensus 224 v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~~~------~~~~~~~~~~~~~~~~~- 292 (387)
T 4awe_A 224 VTWGGEGGFNRGEDEE----DGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWSKS------IEWSNQWIHDHAASGRA- 292 (387)
T ss_dssp EECCCCCCCBCCC--C----CTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHTCC------HHHHHHHHHHHHHHHHH-
T ss_pred EEEcccccccCCCccc----cccccccccccchhcccCCccceeeecccccccchh------hhhhHHHHHHHHHHHHh-
Confidence 9999887765433211 111112223345555678899999999999766543 24556677777777765
Q ss_pred CCCcEEEEecCCCCCCC------CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCc---cCCCCceEEcCC
Q 014151 326 LNKPVFFTEYGLSNLIK------GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGME---EYNDDFGIVPWE 396 (430)
Q Consensus 326 ~gkPv~v~EfG~~~~~~------~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~---~~~dg~~i~~~~ 396 (430)
.+||++++|||...... ......+..+++.+...... .+++|+++|+|.+++.. +++|||+|+..+
T Consensus 293 ~~kp~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~G~~~W~~~~~~~~~~~~~~dg~~i~~~d 367 (387)
T 4awe_A 293 ANKPVVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQKIAIQ-----EKLAGDMYWQFGYGGYSYGRNHDDSFTIYLED 367 (387)
T ss_dssp HTCCEEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHHHHHH-----HTCSEEEESCEECSCBTTBSCCCCSCCEETTS
T ss_pred cCCCeeeccccccccCCCccchhhhhHHHHHHHHHHHHHHHhC-----CCCeEEEEEEEcCCCCCCCCccCCCCEEECCC
Confidence 89999999999876421 11234455666655544332 25899999999987642 456899999875
Q ss_pred CccHHHHHHHHHHHHhhcc
Q 014151 397 RTSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~ 415 (430)
+++..+|++|+++|+.|+
T Consensus 368 -~~~~~~i~~~a~~~~~l~ 385 (387)
T 4awe_A 368 -DEAKELVYKHAKKVQKLN 385 (387)
T ss_dssp -TTHHHHTHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhh
Confidence 678899999999999885
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-48 Score=383.45 Aligned_cols=328 Identities=30% Similarity=0.538 Sum_probs=254.6
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCC-C-----ccccCCC
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGY-N-----SLQISPG 112 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~-~-----~~~~~pg 112 (430)
.|||+++|++|++||+||+++|+|.||+.... +.+.++++|+.||++|+|+||+|+++++.. | -+++.|+
T Consensus 2 ~~~v~~~g~~~~~nG~~~~~~G~n~~~~~~~~----~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~ 77 (344)
T 1qnr_A 2 SSFVTISGTQFNIDGKVGYFAGTNCYWCSFLT----NHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSA 77 (344)
T ss_dssp CCCCEEETTEEEETTEESCEEEEECGGGGGCC----CHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCT
T ss_pred CCcEEEECCEEEECCEEEEEEEEecccccccC----CHHHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCC
Confidence 58999999999999999999999999887553 589999999999999999999987653211 1 1344443
Q ss_pred ---CCC--hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 014151 113 ---QFD--ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKT 187 (430)
Q Consensus 113 ---~~d--e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~ 187 (430)
.++ ++.++.||+++++|+++||+||+++|+.|..+||.+.|..|.. .....||++++.++.++++++.
T Consensus 78 ~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~ 150 (344)
T 1qnr_A 78 TGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFG-------GNATTWYTNTAAQTQYRKYVQA 150 (344)
T ss_dssp TCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHC-------SCTTGGGGCHHHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccCCHHHHHHHhC-------CChhhhcCCHHHHHHHHHHHHH
Confidence 455 8899999999999999999999999998988888888888862 2346789999999999999999
Q ss_pred HHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCc-cCCCCCCCcccCc
Q 014151 188 VLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGF-YGPKSPKRLTVNP 266 (430)
Q Consensus 188 lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~-~~~~~~~~~~~np 266 (430)
+++| ||++|+|++|+|+|||.+... +.+.+.+|+++++++||++||+++|++|.+++ +..+.. ..|
T Consensus 151 ~~~r--------~~~~p~v~~w~l~NEp~~~~~-~~~~~~~~~~~~~~~ir~~dp~~~v~~g~~~~~~~~~~~----~~~ 217 (344)
T 1qnr_A 151 VVSR--------YANSTAIFAWELGNEPRCNGC-STDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDG----AYP 217 (344)
T ss_dssp HHHH--------HTTCTTEEEEESCBSCCCTTC-CTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCC----CGG
T ss_pred HHHH--------hCCCCcEEEEEcccCcccCCC-ChHHHHHHHHHHHHHHHhcCCCCEEEECCccccCCCCCc----cCC
Confidence 9999 999999999999999997432 35788999999999999999999999987764 221000 011
Q ss_pred cchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCCh
Q 014151 267 EMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEP 346 (430)
Q Consensus 267 ~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~ 346 (430)
|....|.+|......+.+||+++|.|+..|.... .+...|+..+.+.+++ .+||++|+|||..... .
T Consensus 218 --~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~~~~~------~~~~~~~~~~~~~~~~-~~kPv~l~E~G~~~~~----~ 284 (344)
T 1qnr_A 218 --YTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNY------TWGNGWIQTHAAACLA-AGKPCVFEEYGAQQNP----C 284 (344)
T ss_dssp --GSSSSSCCHHHHHTCTTCCSEEEEECHHHHTCCS------THHHHHHHHHHHHHHH-TTSCEEEEEECCSSCH----H
T ss_pred --ccccccCcHHHHhCCCCCCeEEeeeCCCccCccc------hHHHHHHHHHHHHHHH-cCCCEEEeecCCCCCC----C
Confidence 1112355676656778899999999998776532 2455677777766665 7999999999987653 1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC---CCccCCCCceEEcCCCccHHHHHHHHHHHHh
Q 014151 347 SLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE---GMEEYNDDFGIVPWERTSTYKLLTEQSCGLG 412 (430)
Q Consensus 347 ~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~---~~~~~~dg~~i~~~~~~~~~~~~~~~~~~~~ 412 (430)
... +.++..+. +..+..|+++|+|.++ +..+..|||+|+..+ .+++.||++|+++|+
T Consensus 285 ~~~----~~~~~~~~----~~~~~~g~~~W~~~d~~~~g~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~ 344 (344)
T 1qnr_A 285 TNE----APWQTTSL----TTRGMGGDMFWQWGDTFANGAQSNSDPYTVWYNS-SNWQCLVKNHVDAIN 344 (344)
T ss_dssp HHH----HHHHHHHH----TSTTEEEEEESCEECBCTTSCBCCCCTTCEETTS-HHHHHHTHHHHHHHC
T ss_pred chH----HHHHHHHH----hcCCCCceEEEeccCCCCCCCccCCCCcEEEeCC-ccHHHHHHHHHHhcC
Confidence 111 22333222 2235789999999884 224456899999986 567799999999984
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=307.49 Aligned_cols=290 Identities=17% Similarity=0.231 Sum_probs=202.2
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCC-----CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-----CC
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVH-----DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-----SP 111 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~-----~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-----~p 111 (430)
|+|+|++|++||||++|+|+|.+|....... ..+.+.++++|+.||++|+|+||+|++.++...+... .+
T Consensus 2 v~v~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~ 81 (351)
T 3vup_A 2 LHIQNGHFVLNGQRVFLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTG 81 (351)
T ss_dssp CEEETTEEEETTEEBCEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEE
T ss_pred EEEECCEEEECCEEEEEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCccccccccccc
Confidence 7899999999999999999999887643321 1357889999999999999999999987653322111 12
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 112 GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 112 g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
..++++.++.+|+++++|+++||+||+++++.|...++...+..+ ++.++..++.++++++.+++|
T Consensus 82 ~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~v~r 147 (351)
T 3vup_A 82 PDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNRLDGL--------------IKDQHKLQSYIDKALKPIVNH 147 (351)
T ss_dssp SCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGHHHHH--------------HHCHHHHHHHHHHTHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCccccc--------------cCCcHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999876544443222221 234466788889999999999
Q ss_pred cCCcccccccCCCceeEEeecCCCCCCCC--------------------------CChHHHHHHHHHHHHHHHhcCCCCE
Q 014151 192 KNTITGVEYRNDPTIFAWELINEPRCMSD--------------------------PSGDTLQDWIDEMSAFVKSIDKKHL 245 (430)
Q Consensus 192 ~n~~tg~~yk~~p~I~~wel~NEp~~~~~--------------------------~~~~~~~~w~~~~~~~Ir~~dp~~l 245 (430)
||+||+|++|+|.|||.+... ...+.+.+|+++++++||++||+||
T Consensus 148 --------~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~dp~~l 219 (351)
T 3vup_A 148 --------VKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDILRFLNWQADAIKTTDPGAL 219 (351)
T ss_dssp --------TTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred --------hcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhhHHHHHHHHHHHhhccCCCCe
Confidence 999999999999999965321 1246788999999999999999999
Q ss_pred EEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhc
Q 014151 246 VTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKE 325 (430)
Q Consensus 246 V~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~ 325 (430)
|++|..+++...... .+..+....+.++......+.+|++++|.|+......... .+. +..... .
T Consensus 220 v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~~~~~~----~~~------~~~~~~-~ 284 (351)
T 3vup_A 220 VTMGVWNPKSNTDHF----NMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGKWDEVA----PFT------HQASDY-G 284 (351)
T ss_dssp EEEEESSGGGSCSST----TCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTBCCTTC----GGG------SCGGGG-C
T ss_pred eEecCcccccccCcc----ccccccccccccccccccccccceeeeeccCcccccchhh----hHH------HHHHhc-C
Confidence 999987765433211 1111111112234444567889999999998432111100 000 001122 3
Q ss_pred CCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 326 LNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 326 ~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.+||++|+|||....... ...++++ .+++. +.+|.++|+|.+.
T Consensus 285 ~~kPvii~Efg~~~~~~~----~~~~~~~----~~~~~-----~~~G~~~W~~~d~ 327 (351)
T 3vup_A 285 LHKPIVVGEFWEQDGGGM----TITQMFN----YVYNH-----GYAGAWSWHLVQR 327 (351)
T ss_dssp CSSCEEEEECCGGGSTTC----CHHHHHH----HHHHT-----TCSEEEEECHHHH
T ss_pred CCCcEEEEeCCCCCCCCc----CHHHHHH----HHHhc-----CCeEEEEEeeecC
Confidence 799999999998765421 1223333 33332 4789999999875
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=283.48 Aligned_cols=308 Identities=17% Similarity=0.233 Sum_probs=198.7
Q ss_pred CCCcEEEeCCeEEE-CCeEEEEEeeeccccccccC--CCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc--CCC
Q 014151 38 EMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPG 112 (430)
Q Consensus 38 ~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg 112 (430)
+.|||+|+|++|+. +|++++++|+|.+....... .......++++|+.||++|+|+||+++. |..+++ .|+
T Consensus 2 ~~~~l~v~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~~~----~~~~~~~~~~~ 77 (358)
T 1ece_A 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYS----DDILKPGTMPN 77 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEE----GGGGSTTCCCC
T ss_pred CCCCEEEcCCEEEcCCCCEEEEEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEeecc----HHHhcCCCCCc
Confidence 56899999999996 99999999999543211110 1111234689999999999999999753 333443 256
Q ss_pred CCChH----------HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHH
Q 014151 113 QFDER----------VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFK 182 (430)
Q Consensus 113 ~~de~----------~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~ 182 (430)
.+++. .++.||++|++|.++||+|||++|+. ++. .....|++++..++.++
T Consensus 78 ~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~~----~~~---------------~~~~~w~~~~~~~~~~~ 138 (358)
T 1ece_A 78 SINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRP----DCS---------------GQSALWYTSSVSEATWI 138 (358)
T ss_dssp SCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEES----BTT---------------BCCSSSCCSSSCHHHHH
T ss_pred cccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCCC----CCC---------------CCCCCCcCCCccHHHHH
Confidence 66644 89999999999999999999999851 111 11234566777789999
Q ss_pred HHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC----CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCC
Q 014151 183 HYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKS 258 (430)
Q Consensus 183 ~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~ 258 (430)
++++.|++| |+++|+|++|+|+|||..... .....+.+++++++++||++||+++|+++..+....
T Consensus 139 ~~~~~ia~r--------~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~-- 208 (358)
T 1ece_A 139 SDLQALAQR--------YKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNG-- 208 (358)
T ss_dssp HHHHHHHHH--------TTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETT--
T ss_pred HHHHHHHHH--------hcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCC--
Confidence 999999999 999999999999999987531 123567788999999999999999999975432000
Q ss_pred CCCcccCccchhhc-cCc-chhhccCCCCcceEEeeecCCC-----CCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEE
Q 014151 259 PKRLTVNPEMWASA-LGS-DFIRNSNNDNIDFASVHIYPDH-----WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVF 331 (430)
Q Consensus 259 ~~~~~~np~~w~~~-~g~-df~~~~~~~~iD~~s~H~Y~~~-----w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~ 331 (430)
++..|... .+. +....+.....+++++|.|+.. |......+..++ ..|-......+++ .++||+
T Consensus 209 ------~~~~w~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~-~g~Pv~ 279 (358)
T 1ece_A 209 ------DSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMP--GIWNKNWGYLFNQ-NIAPVW 279 (358)
T ss_dssp ------EECSTTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHH--HHHHHHTHHHHHT-TSSCEE
T ss_pred ------CCCccCCcCCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHH--HHHHHHHHHHHhc-CCCCEE
Confidence 00012110 000 0000011123468999999853 322222222111 1111111111233 789999
Q ss_pred EEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCC
Q 014151 332 FTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396 (430)
Q Consensus 332 v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~ 396 (430)
|||||..... ..+..+++.+++.+.+.+..+...+|+++|++.++ ..+.++|...+
T Consensus 280 igEfG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~----~~d~~Gl~~~d 335 (358)
T 1ece_A 280 LGEFGTTLQS-----TTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPD----SGDTGGILKDD 335 (358)
T ss_dssp EEECCCCCCS-----HHHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSC----CTTTCCSBCTT
T ss_pred EeccCCCCCC-----CccHHHHHHHHHHHHHhhhcccCCceeeEEcccCC----CCCCCceeccc
Confidence 9999987642 23456666655433221110113579999999864 24667887653
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=283.54 Aligned_cols=287 Identities=17% Similarity=0.338 Sum_probs=189.2
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccC---CCCC--HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCC
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAV---HDYS--RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~---~~~~--~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
.+||+++|++|++||+|++++|+|.+|...... ..++ .+.++++|+.||++|+|+||++++.++...+....+|.
T Consensus 2 ~~~v~v~g~~~~~nG~~~~~~GvN~~w~~~~~~~~~~~~~~~~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~ 81 (353)
T 2c0h_A 2 AVRLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGY 81 (353)
T ss_dssp CCCEEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSC
T ss_pred CceEEEeCCEEEECCeEEEEEEEEHHhhhccccccCCccccchHHHHHHHHHHHHcCCCEEEEceecCCccCccccCCCc
Confidence 589999999999999999999999987664321 1122 67899999999999999999987754322122223442
Q ss_pred ---CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCH-HHHHHHHHHHHHHH
Q 014151 114 ---FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDP-SIHKYFKHYVKTVL 189 (430)
Q Consensus 114 ---~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~-~~~~~~~~~~~~lv 189 (430)
.++..|+.+|+++++|+++||+||+++++.|....|.. .+ ..++.++ ..++.+++.++.|+
T Consensus 82 ~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~~~~~~g~~---~~------------~~~~~~~~~~~~~~~~~~~~~a 146 (353)
T 2c0h_A 82 VTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHY---RL------------NGLMVDTRKLQSYIDHALKPMA 146 (353)
T ss_dssp EEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHH---HH------------HHHHHCHHHHHHHHHHTHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEccCccccCCCcc---cc------------cceEeCHHHHHHHHHHHHHHHH
Confidence 34588999999999999999999999965443221110 00 1224454 35555568889999
Q ss_pred hccCCcccccccCCCceeEEeecCCCCCCCC--------------------------CChHHHHHHHHHHHHHHHhcCCC
Q 014151 190 TRKNTITGVEYRNDPTIFAWELINEPRCMSD--------------------------PSGDTLQDWIDEMSAFVKSIDKK 243 (430)
Q Consensus 190 ~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~--------------------------~~~~~~~~w~~~~~~~Ir~~dp~ 243 (430)
+| ||++|+|++|+|+|||.+... ...+.+.+|+++++++||++||+
T Consensus 147 ~r--------y~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~Ir~~dp~ 218 (353)
T 2c0h_A 147 NA--------LKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPG 218 (353)
T ss_dssp HH--------HTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HH--------hCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHHHHHHHHHHHHHHhhCCC
Confidence 99 999999999999999987410 01267889999999999999999
Q ss_pred CEEEEccCCccCCCCCCCcccCccchhhccCcchhh--ccCCCCcceEEeeecCCC--CCCCcchhhhHHHHHHHHHHHH
Q 014151 244 HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR--NSNNDNIDFASVHIYPDH--WFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 244 ~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~--~~~~~~iD~~s~H~Y~~~--w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
|+|++|..+.+.... .... ...|.. ..+.. ....+.+|++++|+|+.. |.....+. .. .
T Consensus 219 ~~V~~~~~~~~~~~~--~~~~-~~~~~d---~~l~~~~~~~~~~~D~~s~H~Y~~~~~~~~~~~~~----------~~-~ 281 (353)
T 2c0h_A 219 AMVTVGSWNMKADTD--AMGF-HNLYSD---HCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFK----------HS-F 281 (353)
T ss_dssp CCEEEEESCGGGBCS--STTC-CBTTSH---HHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTS----------SC-G
T ss_pred CeEEECCccccCCCc--ccCc-CCCCcc---hhhhhhccccCCCCCEEEEeeCCCcccccccCccc----------ch-H
Confidence 999998643221100 0000 000100 00000 123578999999999832 21110000 00 0
Q ss_pred HhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
. ..+ .+||++|+|||....... ++..+++.+.+ . +..|+++|+|.+
T Consensus 282 ~-~~~-~~~P~~i~E~G~~~~~~~--------~~~~~~~~~~~----~-g~~g~~~W~~~d 327 (353)
T 2c0h_A 282 S-NFR-LKKPMVIGEFNQEHGAGM--------SSESMFEWAYT----K-GYSGAWTWSRTD 327 (353)
T ss_dssp G-GGC-CSSCEEEEECCGGGSTTC--------CHHHHHHHHHH----T-TCSEEEESCSSS
T ss_pred H-Hhc-CCCCEEEEecCCCCCCCc--------cHHHHHHHHHH----C-CCcEEEEEEEcC
Confidence 1 112 689999999998764311 23344444433 2 469999999997
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-33 Score=286.54 Aligned_cols=301 Identities=17% Similarity=0.245 Sum_probs=204.5
Q ss_pred CCCcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHH-HHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAML-QAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
....++++|++|+. +|++++++|+|.++....... ......+++| +.|+++|+|+||+.+. |..+++.||.|+
T Consensus 26 ~~~~~~~~g~~i~d~~G~~~~l~GvN~~~~~~~~~~-g~~~~~~~di~~~l~~~G~N~VRl~v~----w~~~~p~~g~~~ 100 (481)
T 2osx_A 26 SGSGTALTPSYLKDDDGRSLILRGFNTASSAKSAPD-GMPQFTEADLAREYADMGTNFVRFLIS----WRSVEPAPGVYD 100 (481)
T ss_dssp -------CCCCCBCTTCCEECCEEEEECGGGGTCTT-SCCSCCHHHHHHHHHHHCCCEEEEEEC----HHHHCSBTTBCC
T ss_pred CCcccccCCCeEECCCCCEEEeeeEecCCCCCCCCC-CCccccHHHHHHHHHHCCCCEEEEeCc----HHHcCCCCCCcC
Confidence 34447899999997 899999999998765432211 1235678899 9999999999999653 667788899999
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccC-CcccC-------------CCcchhhhhhhhh-CCCCCCC-------------
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVN-NLQAY-------------GGKTQYVNWAWEE-GIGISSS------------- 167 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~-~w~~~-------------gg~~~y~~W~~~~-G~~~~~~------------- 167 (430)
++.++.||++|++|+++||+|||++|+ .|..+ || ..++.|.... |.+....
T Consensus 101 ~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ng~~~gg-~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~ 179 (481)
T 2osx_A 101 QQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIG-NGAPAWATYMDGLPVEPQPRWELYYIQPGVM 179 (481)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSBTTBCSSS-BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccccccccCC-CCCccceeccCCCCccccccchhhccchhhH
Confidence 999999999999999999999999996 35421 22 2356776421 1111000
Q ss_pred --CCCCC----CCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----ChHHHHHHHHHHHHHH
Q 014151 168 --NDSFF----FDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----SGDTLQDWIDEMSAFV 237 (430)
Q Consensus 168 --~~~f~----~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~~~~~~~w~~~~~~~I 237 (430)
...|| +++..++.++++|+.|++| ||++|+|++|+|+|||...... +.+.+.+|+++++++|
T Consensus 180 ~~~~~f~~~~~~~~~~~~~~~~~~~~la~r--------yk~~p~Vi~~el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aI 251 (481)
T 2osx_A 180 RAFDNFWNTTGKHPELVEHYAKAWRAVADR--------FADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAI 251 (481)
T ss_dssp HHHHHHTTTTSSCTHHHHHHHHHHHHHHHH--------HTTCTTEEEEECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHHHHH--------hcCCCcEEEEEeecCCCCCCCCCccccHHHHHHHHHHHHHHH
Confidence 01344 5678999999999999999 9999999999999999985321 1356788999999999
Q ss_pred HhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCC----CcceEEeeecCCC------CCCCcchhhh
Q 014151 238 KSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNND----NIDFASVHIYPDH------WFHDLEFEDD 307 (430)
Q Consensus 238 r~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~----~iD~~s~H~Y~~~------w~~~~~~~~~ 307 (430)
|++||+++|+++..++ +. .|... ..+. .+..| ..+++++|+|+.. |.. ......
T Consensus 252 R~~dp~~~I~v~~~~~-~~-----------~~~~~--~~l~-~~~~p~~~~~~~v~s~H~Y~~~~~~~~~~~~-~~~~~~ 315 (481)
T 2osx_A 252 RQVDQDTWVCVAPQAI-GV-----------NQGLP--SGLT-KIDDPRAGQQRIAYCPHLYPLPLDIGDGHEG-LARTLT 315 (481)
T ss_dssp TTTCSSSEEEECCCST-TG-----------GGTCC--CCCC-CCCCCSSSSCCEEECCBCCCHHHHHTTSSSH-HHHHHH
T ss_pred HhhCCCcEEEEcCccc-cc-----------ccCCC--CCCc-ccCCCcccCCCEEEEEEecCcccccCCccCc-cchhhH
Confidence 9999999999986432 10 11100 0010 11122 3468999999741 211 000001
Q ss_pred HHHHHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 308 LKFVTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
...+..|+....+.+++ . ++||+|+|||.... ...+.+|++.+++.+.+. .+|+++|++.+
T Consensus 316 ~~~~~~~~~~~~~~~~~-~~g~Pv~igEfG~~~~-----~~~~~~~~~~~~~~~~~~------~ig~~~W~~~~ 377 (481)
T 2osx_A 316 DVTIDAWRANTAHTARV-LGDVPIILGSFGLDTT-----LPGARDYIERVYGTAREM------GAGVSYWSSDP 377 (481)
T ss_dssp HHHHHHHHHHHHHHHHH-TTSCCBEECBCCCCTT-----STTHHHHHHHHHHHHHHH------TCEEEESCCSS
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCEEEeccCCCCC-----chHHHHHHHHHHHHHHHc------CCCeEEECCCC
Confidence 12234555555555554 7 99999999996543 235678888777655442 47999999986
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=263.52 Aligned_cols=278 Identities=14% Similarity=0.156 Sum_probs=187.6
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCCCCh-
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQFDE- 116 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~~de- 116 (430)
.++|+|+|++|++||+||+++|+|.+|....... .....+++|+.|+ ++|+|+||+.+. |. ...+...++
T Consensus 2 ~~~l~v~g~~~~~nG~~~~l~Gvn~~~~~~~~~~--~~~~~~~d~~~l~~~~G~N~vR~~~~----~~--~~~~~~~~~~ 73 (291)
T 1egz_A 2 VEPLSVNGNKIYAGEKAKSFAGNSLFWSNNGWGG--EKFYTADTVASLKKDWKSSIVRAAMG----VQ--ESGGYLQDPA 73 (291)
T ss_dssp CCCEEEETTEEEETTEECCCEEEEEEECCTTSSG--GGGCSHHHHHHHHHTTCCCEEEEEEE----CS--STTSTTTCHH
T ss_pred CCcEEecCCEEEECCCEEEEEEEeecccccccCC--CccCCHHHHHHHHHHcCCCEEEEecc----cc--ccCCCcCCHH
Confidence 4689999999999999999999998875521100 1122478999999 899999999553 22 111112354
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
..++.||++|++|.++||+||+++|+. + .+..++.+.++|+.|++|
T Consensus 74 ~~~~~ld~~v~~a~~~Gi~vild~h~~----~-------------------------~~~~~~~~~~~~~~ia~r----- 119 (291)
T 1egz_A 74 GNKAKVERVVDAAIANDMYAIIGWHSH----S-------------------------AENNRSEAIRFFQEMARK----- 119 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECS----C-------------------------GGGGHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCC----C-------------------------cchhHHHHHHHHHHHHHH-----
Confidence 579999999999999999999999752 1 022467889999999999
Q ss_pred cccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcc
Q 014151 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSD 276 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~d 276 (430)
||++|+|+ |+|+|||..... .+.+.+|+++++++||+.||+|+|++|..++ +.. . ...
T Consensus 120 ---~~~~p~V~-~el~NEP~~~~~--~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~-~~~--------~-~~~------ 177 (291)
T 1egz_A 120 ---YGNKPNVI-YEIYNEPLQVSW--SNTIKPYAEAVISAIRAIDPDNLIIVGTPSW-SQN--------V-DEA------ 177 (291)
T ss_dssp ---HTTSTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHHHCSSSCEEECCHHH-HTC--------H-HHH------
T ss_pred ---hCCCCcEE-EEecCCCCCCch--HHHHHHHHHHHHHHHHhcCCCCEEEECCCCc-ccc--------c-chh------
Confidence 99999998 999999997532 2468899999999999999999999975322 110 0 000
Q ss_pred hhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-C-CChhHHHHHHH
Q 014151 277 FIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-G-FEPSLRDKLYK 354 (430)
Q Consensus 277 f~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-~-~~~~~r~~~~~ 354 (430)
.......+ .+++++|.|+... . ..+..+++.+.+ .+||++|+|||...... + .+.+.+..+
T Consensus 178 ~~~p~~~~-~~~~s~H~Y~~~~--~-----------~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~g~~~~~~~~~~-- 240 (291)
T 1egz_A 178 SRDPINAK-NIAYTLHFYAGTH--G-----------ESLRNKARQALN-NGIALFVTEWGTVNADGNGGVNQTETDAW-- 240 (291)
T ss_dssp HTSCCCSS-SEEEEEEEETTTC--C-----------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCCCHHHHHHH--
T ss_pred hcCCCCCC-CEEEEEEecCCCC--h-----------HHHHHHHHHHHH-CCCcEEEecccCcCCCCCCCcCHHHHHHH--
Confidence 00001112 3588999998531 1 113334444444 79999999999976532 1 222333333
Q ss_pred HHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCC--CccH-HHHHHHHHHH
Q 014151 355 TILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE--RTST-YKLLTEQSCG 410 (430)
Q Consensus 355 ~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~--~~~~-~~~~~~~~~~ 410 (430)
++.+. +. .+|+++|+|.+.+ +++++.... +.+. -++|++..+.
T Consensus 241 --~~~~~----~~--~~g~~~W~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~ 286 (291)
T 1egz_A 241 --VTFMR----DN--NISNANWALNDKN-----EGASTYYPDSKNLTESGKKVKSIIQS 286 (291)
T ss_dssp --HHHHH----HT--TCCEEEEEECCSS-----STTCSBCTTSCCBCHHHHHHHHHHHT
T ss_pred --HHHHH----HC--CCeEEEEecCCCC-----CccceecCCCCCcChhHHHHHHHHhc
Confidence 33222 22 4799999999752 445555432 2333 3777776653
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=258.61 Aligned_cols=276 Identities=15% Similarity=0.168 Sum_probs=186.2
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCCC---
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQF--- 114 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~~--- 114 (430)
-++|+|+|++|+.||+||+++|+|.+|....... .....+++|+.|+ ++|+|+||+.+. |. +.++.|
T Consensus 2 l~~l~v~g~~i~~nG~~v~l~Gvn~~~~~~~~~~--~~~~~~~di~~~~~~~G~N~vRi~~~----~~---~~~~~~~~~ 72 (293)
T 1tvn_A 2 VEKLTVSGNQILAGGENTSFAGPSLFWSNTGWGA--EKFYTAETVAKAKTEFNATLIRAAIG----HG---TSTGGSLNF 72 (293)
T ss_dssp CCCEEEETTEEEETTEECCCEEEEECCCCTTSSC--GGGCSHHHHHHHHHHHCCSEEEEEEE----CC---TTSTTSTTT
T ss_pred CCcEEecCCEEEeCCCEEEEEeeeecccccccCC--CCCCCHHHHHHHHHhcCCCEEEEecc----cc---CCCCCcccc
Confidence 4789999999999999999999999876422111 1112468899999 599999999543 21 222333
Q ss_pred C-hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 115 D-ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 115 d-e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
+ +..++.||++|++|.++||+|||++|.. ++. +.++.+.++|+.|++|
T Consensus 73 ~p~~~~~~ld~~v~~a~~~Gi~vild~h~~----~~~-------------------------~~~~~~~~~~~~~a~r-- 121 (293)
T 1tvn_A 73 DWEGNMSRLDTVVNAAIAEDMYVIIDFHSH----EAH-------------------------TDQATAVRFFEDVATK-- 121 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEECS----CGG-------------------------GCHHHHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHHHHHHCCCEEEEEcCCC----Ccc-------------------------ccHHHHHHHHHHHHHH--
Confidence 4 5789999999999999999999999862 100 1256789999999999
Q ss_pred CcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhcc
Q 014151 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASAL 273 (430)
Q Consensus 194 ~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~ 273 (430)
||++|+|+ |+|+|||..... .+.+.+|+++++++||+.||+|+|++|..++.+ . . ...
T Consensus 122 ------~~~~p~V~-~el~NEP~~~~~--~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~-~--------~-~~~--- 179 (293)
T 1tvn_A 122 ------YGQYDNVI-YEIYNEPLQISW--VNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQ-D--------V-DVA--- 179 (293)
T ss_dssp ------HTTCTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHT-C--------H-HHH---
T ss_pred ------hCCCCeEE-EEccCCCCCCch--HHHHHHHHHHHHHHHHhhCCCCEEEECCCCccc-c--------c-chh---
Confidence 99999998 999999987532 246889999999999999999999997533211 0 0 000
Q ss_pred CcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC--CCChhHHHH
Q 014151 274 GSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK--GFEPSLRDK 351 (430)
Q Consensus 274 g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~--~~~~~~r~~ 351 (430)
....... ..+++++|.|+..+. .++..+.+.+.+ .++|++|+|||...... +.+.+.+..
T Consensus 180 ---~~~p~~~-~n~v~s~H~Y~~~~~-------------~~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~g~~~~~~~~~ 241 (293)
T 1tvn_A 180 ---SQNPIDR-ANIAYTLHFYAGTHG-------------QSYRNKAQTALD-NGIALFATEWGTVNADGNGGVNINETDA 241 (293)
T ss_dssp ---HHSCCCS-SSEEEEEEEETTTCC-------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSCCCHHHHHH
T ss_pred ---ccCCCCC-CCEEEEEEeCCCCch-------------HHHHHHHHHHHH-CCCcEEEEcccCcCCCCCCCCCHHHHHH
Confidence 0001111 235889999986321 123334444444 79999999999976532 112233444
Q ss_pred HHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCC----CccHH-HHHHHHHH
Q 014151 352 LYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE----RTSTY-KLLTEQSC 409 (430)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~----~~~~~-~~~~~~~~ 409 (430)
++ +.+.+ . .+|+++|+|.+.+ +++++...+ +++.. ++|++..+
T Consensus 242 ~~----~~~~~----~--~~g~~~W~~~~~~-----~~~~~~~~~~~w~~~~~~g~~~~~~~~ 289 (293)
T 1tvn_A 242 WM----AFFKT----N--NISHANWALNDKN-----EGASLFTPGGSWNSLTSSGSKVKEIIQ 289 (293)
T ss_dssp HH----HHHHH----H--TCCEEEEEESCSS-----STTCSBCTTCCTTSBCHHHHHHHHHHH
T ss_pred HH----HHHHH----C--CCeeEEEecCCCC-----CceeEECCCCCccchhHhHHHHHHHhh
Confidence 43 32322 2 4799999999752 344444321 23333 66666654
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=275.92 Aligned_cols=313 Identities=15% Similarity=0.190 Sum_probs=194.6
Q ss_pred CCCCCcEEEeCCeEEE----CC--eEEEEEeeeccccccccC--CCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcc
Q 014151 36 EPEMGFVTRNGTHFML----DG--KALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL 107 (430)
Q Consensus 36 ~~~~gfv~~~g~~f~~----~G--~~~~~~G~N~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~ 107 (430)
.+..+|++|+|++|+. || +||+++|+|.++...... .......++++++.|+++|+|+||+... |..+
T Consensus 35 ~~~~~~l~v~G~~iv~~~~~~G~~~~v~l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRipi~----~~~l 110 (458)
T 3qho_A 35 TPTGIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFC----TESV 110 (458)
T ss_dssp CSSSEEEEEETTEEEEEETTTCCEEECCCEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEE----TGGG
T ss_pred CCCCCeEEEECCEEEEecCCCCCcceEEEEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEeee----HHHh
Confidence 4567999999999998 88 999999999655443211 1112234789999999999999999542 2222
Q ss_pred cc-----------CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHH
Q 014151 108 QI-----------SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPS 176 (430)
Q Consensus 108 ~~-----------~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~ 176 (430)
++ .|..++++.++.||++|++|.++||+|||++|+. .++. . ...|+.+..
T Consensus 111 ~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~---~~~~-~---------------~~~W~~~~~ 171 (458)
T 3qho_A 111 KPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRI---GCTH-I---------------EPLWYTEDF 171 (458)
T ss_dssp STTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEES---SSSS-C---------------CSSSCBTTB
T ss_pred CCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccC---CCcc-C---------------CCccCCchh
Confidence 22 2334456789999999999999999999999863 1110 0 112333333
Q ss_pred HHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC----------------CChHHHHHHHHHHHHHHHhc
Q 014151 177 IHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----------------PSGDTLQDWIDEMSAFVKSI 240 (430)
Q Consensus 177 ~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----------------~~~~~~~~w~~~~~~~Ir~~ 240 (430)
.++.+.++|+.|++| ||++|+|++|||.|||..... .....+.+++++++++||+.
T Consensus 172 ~~~~~~~~w~~lA~r--------yk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~ 243 (458)
T 3qho_A 172 SEEDFINTWIEVAKR--------FGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKV 243 (458)
T ss_dssp CHHHHHHHHHHHHHH--------HTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH--------hCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHh
Confidence 578899999999999 999999999999999996310 12356888899999999999
Q ss_pred CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc----cCCCCcceEEeeecCCC-----CCCCc-chhhhHHH
Q 014151 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN----SNNDNIDFASVHIYPDH-----WFHDL-EFEDDLKF 310 (430)
Q Consensus 241 dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~----~~~~~iD~~s~H~Y~~~-----w~~~~-~~~~~~~~ 310 (430)
||+++|.++...+.+..........-..|... .....+. +...++ ++++|.|.+. |...+ ++...
T Consensus 244 dp~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~-~l~~v~~~Pi~l~~~nl-vYs~H~Y~~~~~~~~~~~~~~~~~~~--- 318 (458)
T 3qho_A 244 APHWLIFVEGTQFTNPKTDSSYKWGYNAWWGG-NLMAVKDYPVNLPRNKL-VYSPHVFGPDVYNQPYFGPAKGFPDN--- 318 (458)
T ss_dssp CTTCEEEECCBSCCCHHHHHTSTTTTCCCTTC-BCGGGTTSCCCSCTTTE-EECCBCCCTTTCCCGGGSGGGTTTTT---
T ss_pred CCCCEEEEcCCcccCccccccccccccCcCCC-CchhhhcCCCcCCCCCE-EEEEEECCCCCCCCccccCccchHHH---
Confidence 99999999875542200000000000112110 0111111 112344 6899999864 22111 11111
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCc
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDF 390 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~ 390 (430)
+......+.....+..+.||+|+|||......+ +... ..|+..+++-+. +. ...++++|+|.++. .|.+
T Consensus 319 ~~~~w~~~~g~l~~~~~~Pl~igEfG~~~~~g~-~~~~-~~w~~~~~~yl~----~~-~i~~w~~W~~np~s----~dt~ 387 (458)
T 3qho_A 319 LPDIWYHHFGYVKLELGYSVVIGEFGGKYGHGG-DPRD-VIWQNKLVDWMI----EN-KFCDFFYWSWNPDS----GDTG 387 (458)
T ss_dssp HHHHHHHHTTHHHHTTCCCBCBCBCCCCTTSSS-CTHH-HHHHHHHHHHHH----HT-TCCCEEESCSSSCC----TTTC
T ss_pred HHHHHHhhhhhHhhcCCCcEEEEecCCCcCCCC-Ccch-HHHHHHHHHHHH----hc-CCCCEEEEecCCCC----CCCC
Confidence 111122222222212789999999999764211 1112 345555544333 22 35689999999752 3445
Q ss_pred eEEcC
Q 014151 391 GIVPW 395 (430)
Q Consensus 391 ~i~~~ 395 (430)
++..+
T Consensus 388 Gll~~ 392 (458)
T 3qho_A 388 GILQD 392 (458)
T ss_dssp CSBCT
T ss_pred ccccc
Confidence 55443
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=264.42 Aligned_cols=301 Identities=15% Similarity=0.121 Sum_probs=196.0
Q ss_pred CCCCCcEEEeCCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 36 EPEMGFVTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 36 ~~~~gfv~~~g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
+.+.++|+|+|++|+ .||+||+|+|+|.++....... ....+++|+.||++|+|+||+.+. |..+++. .
T Consensus 46 ~~~~~~l~v~G~~~~d~nG~~~~l~Gvn~~~~~~~~~~---g~~~~~di~~ik~~G~N~VRi~~~----~~~~~~~---~ 115 (359)
T 4hty_A 46 TRQLPLIKVEGNRFVDEQGKTIVFRGVNISDPDKIDKD---KRFSKKHFEVIRSWGANVVRVPVH----PRAWKER---G 115 (359)
T ss_dssp CCCCCCCEEETTEEECTTCCEECCEEEEECCHHHHHHT---TCCSHHHHHHHHHTTCSEEEEEEC----HHHHHHH---H
T ss_pred CCCCCcEEEeCCEEECCCCCEEEEEEEecCCcccCCCC---CCcCHHHHHHHHhcCCCEEEEecc----HHHhhcc---C
Confidence 356789999999999 6999999999998754321100 011367899999999999999543 2222221 2
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHhc
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPS---IHKYFKHYVKTVLTR 191 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~---~~~~~~~~~~~lv~R 191 (430)
++..++.||++|++|.++||+|||++|..- +. ...+|.++. .++.+.++++.|++|
T Consensus 116 ~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~----~~-----------------~~~~~~~~~~~~~~~~~~~~~~~la~r 174 (359)
T 4hty_A 116 VKGYLELLDQVVAWNNELGIYTILDWHSIG----NL-----------------KSEMFQNNSYHTTKGETFDFWRRVSER 174 (359)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECCEE----ET-----------------TTTEESSGGGCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCCC----CC-----------------CcccccCCcchhHHHHHHHHHHHHHHH
Confidence 478899999999999999999999998631 10 012244443 378889999999999
Q ss_pred cCCcccccccCCCceeEEeecCCCCCCC----CCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc
Q 014151 192 KNTITGVEYRNDPTIFAWELINEPRCMS----DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE 267 (430)
Q Consensus 192 ~n~~tg~~yk~~p~I~~wel~NEp~~~~----~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~ 267 (430)
||++|+|++|+|+|||.... ..+.+.+.+++++++++||++||+++|++|...+ +... .
T Consensus 175 --------yk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w-~~~~--------~ 237 (359)
T 4hty_A 175 --------YNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNW-AYDL--------K 237 (359)
T ss_dssp --------TTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHH-HTCC--------H
T ss_pred --------hCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCccc-cccc--------c
Confidence 99999999999999998642 1234678899999999999999999999985322 1100 0
Q ss_pred chhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-CC--
Q 014151 268 MWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-GF-- 344 (430)
Q Consensus 268 ~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-~~-- 344 (430)
.. ....+..+++ ++++|.|+... ... +...|.. ...... .++||+|+|||...... +.
T Consensus 238 ~~-------~~~p~~~~n~-~ys~H~Y~~~~--~~~------~~~~~~~-~~~~~~--~~~Pv~vtEfG~~~~~g~g~~~ 298 (359)
T 4hty_A 238 EA-------AANPIDRQNI-AYVSHPYPQKV--GAP------YQANWER-DFGFMA--DKYPVFATEIGYQRATDKGAHI 298 (359)
T ss_dssp HH-------HHSCCSSSSE-EEECCCCTTSS--CSS------HHHHHHH-HTGGGG--GTSCEEEEEECCBCTTSTTCCT
T ss_pred hh-------hcCCCCCCCE-EEEEEeCCCCC--Ccc------hHHHHHH-HHHHHh--cCCCEEEecccCCCCCCCCccc
Confidence 00 0011122344 67999998641 111 1222322 112222 48999999999976431 10
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCCCccHH-HHHHHHHHHHh
Q 014151 345 EPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTY-KLLTEQSCGLG 412 (430)
Q Consensus 345 ~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~~~~~~-~~~~~~~~~~~ 412 (430)
+...+.+|++.+++.+.+. .+|+++|+|.++..+.= ++=+.+.+++.. +.+|++.+.+.
T Consensus 299 ~~~~~~~y~~~~~~~~~~~------~i~~~~Ws~~~~~~~~~---~~~w~~~~~t~~G~~~k~~l~~~~ 358 (359)
T 4hty_A 299 PVIDDGSYGPRITDYFNSK------GISWVAWVFDPDWSPQL---FTDYQTYTPTMQGEHFRKVMLQDN 358 (359)
T ss_dssp TSBCCSTHHHHHHHHHHHH------TCEEEEEEESSSSSSCS---BSCTTTCCBCHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHHHHHc------CCeEEEEEeCCCCcchh---hhccccCCCchhhHHHHHHHHhhc
Confidence 1112345555555544332 57999999998633210 000011235444 88888876653
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=259.89 Aligned_cols=258 Identities=17% Similarity=0.233 Sum_probs=176.7
Q ss_pred CCCCCcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHH-HHcCCCEEEEccccCCCCCccccCCC-
Q 014151 36 EPEMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAG-AKMGLTVCRTWAFNDGGYNSLQISPG- 112 (430)
Q Consensus 36 ~~~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~n~vR~~~~~~g~~~~~~~~pg- 112 (430)
.+..|+|+|+|++|+. ||+||+++|+|.++....+. ..+ +++|+.| +++|+|+||+.+..+ .++
T Consensus 31 ~~~~g~l~v~G~~l~d~nG~~v~l~Gvn~h~~~~~~~-~~~----~~~~~~l~~~~G~N~VRi~~~~~--------~~~~ 97 (327)
T 3pzt_A 31 VAKNGQLSIKGTQLVNRDGKAVQLKGISSHGLQWYGE-YVN----KDSLKWLRDDWGITVFRAAMYTA--------DGGY 97 (327)
T ss_dssp ---CCSCEEETTEEECTTSCBCCCEEEEESCHHHHGG-GCS----HHHHHHHHHHTCCSEEEEEEESS--------TTST
T ss_pred CCcCCcEEEeCCEEECCCCCEEEEEEEcCCchhhcCC-CCC----HHHHHHHHHhcCCCEEEEEeEEC--------CCCc
Confidence 3468999999999994 99999999999886554321 112 4567777 689999999965421 122
Q ss_pred CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcc
Q 014151 113 QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 113 ~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~ 192 (430)
..|++.++.+|++|++|+++||+|||++|.. .++. .+...+.+.++|+.|++|
T Consensus 98 ~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~---~~~~-----------------------~~~~~~~~~~~w~~~a~r- 150 (327)
T 3pzt_A 98 IDNPSVKNKVKEAVEAAKELGIYVIIDWHIL---NDGN-----------------------PNQNKEKAKEFFKEMSSL- 150 (327)
T ss_dssp TTCGGGHHHHHHHHHHHHHHTCEEEEEEECS---SSCS-----------------------TTTTHHHHHHHHHHHHHH-
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEEEeccC---CCCC-----------------------chHHHHHHHHHHHHHHHH-
Confidence 2368889999999999999999999999852 1111 012356788999999999
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhc
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASA 272 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~ 272 (430)
||++|+|+ |+|+|||..... ....+.+|+++++++||+.||+++|++|...+ +. .|...
T Consensus 151 -------~k~~p~Vi-~el~NEp~~~~~-w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w-~~-----------~~~~~ 209 (327)
T 3pzt_A 151 -------YGNTPNVI-YEIANEPNGDVN-WKRDIKPYAEEVISVIRKNDPDNIIIVGTGTW-SQ-----------DVNDA 209 (327)
T ss_dssp -------HTTCTTEE-EECCSCCCSSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHH-HT-----------CHHHH
T ss_pred -------hCCCCcEE-EEeccCCCCCcc-cHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcc-cc-----------cchhh
Confidence 99999999 999999986422 13468899999999999999999999975322 11 01000
Q ss_pred cCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHH
Q 014151 273 LGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKL 352 (430)
Q Consensus 273 ~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~ 352 (430)
....+..+ -+++++|.|+.. .. +.+...++.+.+ .++|++|+|||.......- ... .++
T Consensus 210 ----~~~~~~~~-n~v~s~H~Y~~~-~~------------~~~~~~~~~~~~-~g~Pv~igEfG~~~~~g~g-~~~-~~~ 268 (327)
T 3pzt_A 210 ----ADDQLKDA-NVMYALHFYAGT-HG------------QFLRDKANYALS-KGAPIFVTEWGTSDASGNG-GVF-LDQ 268 (327)
T ss_dssp ----HTSCCCCT-TEEEEEEEETTT-CC------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCS-CCC-HHH
T ss_pred ----hhCCCCCC-CeEEEEEecCCC-ch------------HHHHHHHHHHHH-cCCcEEEEccCCCCCCCCC-ccc-HHH
Confidence 00111223 357899999853 11 123333444454 7899999999988753210 011 234
Q ss_pred HHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 353 YKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
++.+++.+.+ ..+|+++|+|.+.
T Consensus 269 ~~~~l~~~~~------~~i~w~~W~~~d~ 291 (327)
T 3pzt_A 269 SREWLKYLDS------KTISWVNWNLSDK 291 (327)
T ss_dssp HHHHHHHHHH------TTCCEEEEEESCC
T ss_pred HHHHHHHHHH------cCCeeEEEEecCC
Confidence 4555544433 2589999999985
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=251.96 Aligned_cols=258 Identities=14% Similarity=0.184 Sum_probs=178.1
Q ss_pred CCCCcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCC-C
Q 014151 37 PEMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPG-Q 113 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg-~ 113 (430)
++.|.++|+|++|+. ||++++++|+|.+++.... ...-+++|+.|+ ++|+|+||+.+..+ .++ .
T Consensus 7 ~~~g~l~v~G~~l~d~nG~~v~lrGvn~~~~~~~~-----~~~~~~~~~~l~~~~G~N~VRip~~~~--------~~~~~ 73 (303)
T 7a3h_A 7 EEHGQLSISNGELVNERGEQVQLKGMSSHGLQWYG-----QFVNYESMKWLRDDWGINVFRAAMYTS--------SGGYI 73 (303)
T ss_dssp HHHCSCEEETTEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHHHTCCCEEEEEEESS--------TTSTT
T ss_pred CCCCeEEEeCCEEECCCCCEEEEEEeccCcccccc-----ccCCHHHHHHHHHhcCCCEEEEEEEeC--------CCCcc
Confidence 356889999999995 9999999999987654332 112256788887 79999999965321 122 2
Q ss_pred CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
.+++.++.||++|++|.++||+|||++|.. .|+. .....+.+.++|+.|++|
T Consensus 74 ~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~---~~~~-----------------------~~~~~~~~~~~w~~ia~r-- 125 (303)
T 7a3h_A 74 DDPSVKEKVKEAVEAAIDLDIYVIIDWHIL---SDND-----------------------PNIYKEEAKDFFDEMSEL-- 125 (303)
T ss_dssp TCTTHHHHHHHHHHHHHHHTCEEEEEEECS---SSCS-----------------------TTTTHHHHHHHHHHHHHH--
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeccc---CCCC-----------------------chHHHHHHHHHHHHHHHH--
Confidence 367789999999999999999999999862 1111 011345678999999999
Q ss_pred CcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhcc
Q 014151 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASAL 273 (430)
Q Consensus 194 ~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~ 273 (430)
||++|+|+ |+|+|||........+.+.+++++++++||+.||+++|++|..++ +. .|...
T Consensus 126 ------~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w-~~-----------~~~~~- 185 (303)
T 7a3h_A 126 ------YGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTW-SQ-----------DVHHA- 185 (303)
T ss_dssp ------HTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHH-HT-----------BHHHH-
T ss_pred ------hCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCc-cc-----------chhhH-
Confidence 99999999 999999997432122468899999999999999999999975322 10 11100
Q ss_pred CcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHH
Q 014151 274 GSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLY 353 (430)
Q Consensus 274 g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~ 353 (430)
....+..++ +++++|.|+.. . . ++++..++.+.+ .++|++|+|||.......-+ .. .+++
T Consensus 186 ---~~~p~~~~n-~v~s~H~Y~~~-~-~-----------~~~~~~~~~~~~-~g~P~~igEfG~~~~~~~g~-~~-~~~~ 245 (303)
T 7a3h_A 186 ---ADNQLADPN-VMYAFHFYAGT-H-G-----------QNLRDQVDYALD-QGAAIFVSEWGTSAATGDGG-VF-LDEA 245 (303)
T ss_dssp ---HTSCCSCTT-EEEEEEEETTS-C-C-----------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCSC-CC-HHHH
T ss_pred ---hhCCCCCCC-EEEEEEecCCC-c-h-----------HHHHHHHHHHHH-cCCCEEEECCCCCCCCCCCc-cc-HHHH
Confidence 001112233 47899999853 1 1 123444455554 79999999999986542100 11 2344
Q ss_pred HHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 354 KTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.+++.+.+ ..+|+++|+|.+.
T Consensus 246 ~~~l~~~~~------~~i~w~~W~~~~~ 267 (303)
T 7a3h_A 246 QVWIDFMDE------RNLSWANWSLTHK 267 (303)
T ss_dssp HHHHHHHHH------TTCCEEEEEESCC
T ss_pred HHHHHHHHh------cCCceEEEEecCC
Confidence 555554433 2689999999985
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=249.56 Aligned_cols=265 Identities=19% Similarity=0.273 Sum_probs=185.1
Q ss_pred CCeEEEEEeeecc-ccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHH
Q 014151 52 DGKALYVNGWNSY-WLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVE 128 (430)
Q Consensus 52 ~G~~~~~~G~N~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~ 128 (430)
||++++++|+|.. ++.......+.....+++|+.|+++|+|+||+.+ .|..+++. +..+++..++.+|++|++
T Consensus 7 ~g~~~~~~GvN~~~~~~~~~~~~w~~~~~~~d~~~l~~~G~n~vR~~i----~w~~~~~~~~~~~~~~~~~~~~d~~v~~ 82 (317)
T 3aof_A 7 ERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPI----RWSTHAYAFPPYKIMDRFFKRVDEVING 82 (317)
T ss_dssp HHHHHHCEEEECCSSTTSSSTTTTSCCCCTHHHHHHHHHTCSEEEECC----CGGGGBCSSTTCCBCHHHHHHHHHHHHH
T ss_pred hhcccccccCcccccccCCCCCcCCCCCCHHHHHHHHHcCCCEEEEec----cHHHhcCCCCCCcCCHHHHHHHHHHHHH
Confidence 7899999999986 5432111112222357899999999999999954 25555553 346789999999999999
Q ss_pred HHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeE
Q 014151 129 ARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208 (430)
Q Consensus 129 A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~ 208 (430)
|.++||+|||++|+. +.|. .+++..++.+.++++.|++| |+++|+|++
T Consensus 83 a~~~Gi~vild~h~~----------~~~~--------------~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~ 130 (317)
T 3aof_A 83 ALKRGLAVVINIHHY----------EELM--------------NDPEEHKERFLALWKQIADR--------YKDYPETLF 130 (317)
T ss_dssp HHHTTCEEEEECCCC----------HHHH--------------HCHHHHHHHHHHHHHHHHHH--------HTTSCTTEE
T ss_pred HHHCCCEEEEEecCC----------cccc--------------CCcHHHHHHHHHHHHHHHHH--------hcCCCCeEE
Confidence 999999999999862 1221 12467899999999999999 999999999
Q ss_pred EeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcce
Q 014151 209 WELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDF 288 (430)
Q Consensus 209 wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~ 288 (430)
|+|+|||.... +.+.+.+++++++++||+.||+++|++|..++.+. . . .. .+... ....-++
T Consensus 131 ~el~NEP~~~~--~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~~~~~-~--~-------~~-----~~~~p-~~~~~~v 192 (317)
T 3aof_A 131 FEILNAPHGNL--TPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGI-S--A-------LE-----KLSVP-KWEKNSI 192 (317)
T ss_dssp EECCSSCCTTS--CHHHHHHHHHHHHHHHHHHCSSSCEEECCSGGGSS-T--T-------GG-----GCCCC-TTCCSEE
T ss_pred EEeccCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCEEEECCCCcCcH-h--H-------Hh-----hCcCC-CCCCCEE
Confidence 99999999743 35788899999999999999999999985433110 0 0 00 01000 1123468
Q ss_pred EEeeecCC--------CCCCCcch--------hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHH
Q 014151 289 ASVHIYPD--------HWFHDLEF--------EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKL 352 (430)
Q Consensus 289 ~s~H~Y~~--------~w~~~~~~--------~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~ 352 (430)
+++|.|+. .|...... ....+.+...+....+.+++ .++||+|+|||..... +.+.|.+|
T Consensus 193 ~~~H~Y~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~ 268 (317)
T 3aof_A 193 VTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKK-NKRPIYIGEFGAYRKA---DLESRIKW 268 (317)
T ss_dssp EEEECCCSHHHHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEECCCCTTS---CHHHHHHH
T ss_pred EEEeccCCcccccCCCCCcCcccccCCcCcCcHHHHHHHHHHHHHHHHHHHH-cCCCEEEeeccccCCC---CHHHHHHH
Confidence 99999974 24321100 01112333444444444444 7999999999997653 45678888
Q ss_pred HHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 353 YKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
++.+++.+.+ . .+|+++|++.+
T Consensus 269 ~~~~~~~~~~----~--~ig~~~W~~~~ 290 (317)
T 3aof_A 269 TSFVVREMEK----R--RWSLAYWEFCS 290 (317)
T ss_dssp HHHHHHHHHH----T--TCEEEESCSSS
T ss_pred HHHHHHHHHH----c--CCEEEEEeCCC
Confidence 8877765543 2 47999999974
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=249.76 Aligned_cols=251 Identities=18% Similarity=0.172 Sum_probs=173.5
Q ss_pred EEEeCCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHH
Q 014151 42 VTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120 (430)
Q Consensus 42 v~~~g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~ 120 (430)
|+|+|++|+ .||++|+++|+| +|.... ....+++|+.|+++|+|+||+.+. + .+.|+++.++
T Consensus 25 l~V~G~~l~d~nG~~~~lrGvn-~~~~~~------~~~~~~~i~~lk~~G~N~VRip~~-~---------~~~~~~~~l~ 87 (345)
T 3jug_A 25 FYVDGNTLYDANGQPFVMKGIN-HGHAWY------KDTASTAIPAIAEQGANTIRIVLS-D---------GGQWEKDDID 87 (345)
T ss_dssp CEEETTEEECTTSCBCCCEEEE-ECGGGC------GGGHHHHHHHHHHTTCSEEEEEEC-C---------SSSSCCCCHH
T ss_pred eEEECCEEEccCCCEEEEeccc-cccccc------ChHHHHHHHHHHHcCCCEEEEEec-C---------CCccCHHHHH
Confidence 899999999 599999999999 554332 223468999999999999999542 1 2356677899
Q ss_pred HHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
.||++|++|.++||+|||++|+.. |+ .+....+.+.++|+.|++| |
T Consensus 88 ~ld~~v~~a~~~GiyVIlDlH~~~---g~-----------------------~~~~~~~~~~~~w~~iA~r--------y 133 (345)
T 3jug_A 88 TVREVIELAEQNKMVAVVEVHDAT---GR-----------------------DSRSDLDRAVDYWIEMKDA--------L 133 (345)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTT---TC-----------------------CCHHHHHHHHHHHHHTHHH--------H
T ss_pred HHHHHHHHHHHCCCEEEEEeccCC---CC-----------------------CcHHHHHHHHHHHHHHHHH--------H
Confidence 999999999999999999998631 10 1234578899999999999 9
Q ss_pred cCC-CceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhh
Q 014151 201 RND-PTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279 (430)
Q Consensus 201 k~~-p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~ 279 (430)
|++ +.| +|+|+|||.... ....+.+.+++++++||+.||+++|++|..++ +.. ..|....+.++..
T Consensus 134 k~~~~~V-i~el~NEP~~~~--~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w-~~~---------~~~~~~~~~~~~~ 200 (345)
T 3jug_A 134 IGKEDTV-IINIANEWYGSW--DGAAWADGYIDVIPKLRDAGLTHTLMVDAAGW-GQY---------PQSIHDYGQDVFN 200 (345)
T ss_dssp TTCTTTE-EEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTB---------THHHHHHHHHHHH
T ss_pred cCCCCeE-EEEecCCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCc-ccc---------chhhccchhhhcc
Confidence 999 555 599999998722 24567777899999999999999999986433 110 0111100111111
Q ss_pred ccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHH
Q 014151 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDI 359 (430)
Q Consensus 280 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~ 359 (430)
.-..+++ ++++|.|. |.... ...++..++.+.+ .++|++|+|||....... .+++.+++.
T Consensus 201 ~dp~~nl-vys~H~Y~--~~g~~---------~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~-------~~~~~~l~~ 260 (345)
T 3jug_A 201 ADPLKNT-IFSIHMYE--YAGGD---------ANTVRSNIDRVID-QDLALVIGEFGHRHTDGD-------VDEDTILSY 260 (345)
T ss_dssp TCTTCCE-EEEEEEST--TTTSS---------HHHHHHHHHHHHT-TTCCEEEEEECCCCCC---------CCHHHHHHH
T ss_pred cCCccce-EEEEEecC--CCCCC---------HHHHHHHHHHHHH-cCCcEEEECcCCCCCCCC-------HHHHHHHHH
Confidence 1112334 78999994 32111 1223444555554 899999999998765321 123344443
Q ss_pred HHHHHhcCCCcccceeeeeccCC
Q 014151 360 VYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 360 ~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
+.+ ..+++++|+|.+.+
T Consensus 261 ~~~------~~i~w~~W~~~~~~ 277 (345)
T 3jug_A 261 SEE------TGTGWLAWSWKGNS 277 (345)
T ss_dssp HHH------HTCEEEESCSSCCC
T ss_pred HHH------cCCEEEEEEEECCC
Confidence 332 25899999998864
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=244.05 Aligned_cols=270 Identities=19% Similarity=0.230 Sum_probs=184.0
Q ss_pred ECCeEEEEEeeecc-ccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHH
Q 014151 51 LDGKALYVNGWNSY-WLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIV 127 (430)
Q Consensus 51 ~~G~~~~~~G~N~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~ 127 (430)
.++.+..++|+|.. |+.... . ....+++|+.|+++|+|+||+.+. |..+++. |+.+++..++.||++|+
T Consensus 13 ~~~~~~~~~GvNlg~~~~~~~---~-~~~~~~d~~~i~~~G~n~vRi~i~----~~~~~~~~~p~~~~~~~~~~ld~~v~ 84 (341)
T 1vjz_A 13 MNNTIPRWRGFNLLEAFSIKS---T-GNFKEEDFLWMAQWDFNFVRIPMC----HLLWSDRGNPFIIREDFFEKIDRVIF 84 (341)
T ss_dssp ----CCCCEEEECCTTSSTTC---C-CCCCHHHHHHHHHTTCCEEEEEEE----GGGTSCSSCTTCCCGGGHHHHHHHHH
T ss_pred hcccccccceecccccccCCC---C-CCCCHHHHHHHHHcCCCEEEeeCC----HHHhcCCCCCCcCCHHHHHHHHHHHH
Confidence 35667778999974 322111 1 245688999999999999999653 3334443 68899999999999999
Q ss_pred HHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC-Cce
Q 014151 128 EARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND-PTI 206 (430)
Q Consensus 128 ~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I 206 (430)
+|.++||+|||++|.. .| |..+.|. .....+|.+++.++.+.++++.|++| |+++ |+|
T Consensus 85 ~a~~~Gi~vildlh~~---pg-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ia~r--------y~~~~~~v 143 (341)
T 1vjz_A 85 WGEKYGIHICISLHRA---PG-------YSVNKEV---EEKTNLWKDETAQEAFIHHWSFIARR--------YKGISSTH 143 (341)
T ss_dssp HHHHHTCEEEEEEEEE---TT-------EESCTTS---CCSSCTTTCHHHHHHHHHHHHHHHHH--------HTTSCTTT
T ss_pred HHHHcCCEEEEEecCC---CC-------cccccCC---CccccccCCHHHHHHHHHHHHHHHHH--------HhcCCCCe
Confidence 9999999999999862 11 1001111 11246788999999999999999999 9999 999
Q ss_pred eEEeecCCCCCCCC--CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCC
Q 014151 207 FAWELINEPRCMSD--PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNND 284 (430)
Q Consensus 207 ~~wel~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~ 284 (430)
++|+|+|||..... ...+.+.+++++++++||++||+++|+++...+ +. . .. ..+..+
T Consensus 144 ~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~~-~~-~---------------~~---~~l~~~ 203 (341)
T 1vjz_A 144 LSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGY-GN-I---------------PV---DDLTIE 203 (341)
T ss_dssp EEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHH-HT-B---------------CC---TTCCCS
T ss_pred EEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCcC-Cc-c---------------cc---cccCCC
Confidence 99999999997542 123678899999999999999999999974221 11 0 00 111223
Q ss_pred CcceEEeeecCC--------CCCCC-----cchhh--------hHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC
Q 014151 285 NIDFASVHIYPD--------HWFHD-----LEFED--------DLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG 343 (430)
Q Consensus 285 ~iD~~s~H~Y~~--------~w~~~-----~~~~~--------~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~ 343 (430)
++ ++++|.|.+ .|... +.++. ..+.+...+......+ + .++|++|||||.....
T Consensus 204 n~-v~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~-~-~g~Pv~igEfG~~~~~-- 278 (341)
T 1vjz_A 204 NT-VQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLR-Q-KGIEVFCGEMGAYNKT-- 278 (341)
T ss_dssp SE-EEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHGGG-G-GTCEEEEEEECCCTTS--
T ss_pred Ce-EEEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHHHHH-H-hCCCeEEeccccccCC--
Confidence 33 789999963 24321 11110 1122333343333323 3 7999999999987753
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 344 FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 344 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.+.+.+|++.+++.+.+ ..+|+++|+|++.
T Consensus 279 -~~~~~~~~~~~~~~~~~~------~~~g~~~W~~~~~ 309 (341)
T 1vjz_A 279 -PHDVVLKWLEDLLEIFKT------LNIGFALWNFRGP 309 (341)
T ss_dssp -CHHHHHHHHHHHHHHHHH------TTCEEEESCSBST
T ss_pred -ChHHHHHHHHHHHHHHHH------cCCceEEEecCCC
Confidence 345677888877765533 2579999999863
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=240.41 Aligned_cols=255 Identities=12% Similarity=0.078 Sum_probs=168.4
Q ss_pred cEEEeCCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHH
Q 014151 41 FVTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVF 119 (430)
Q Consensus 41 fv~~~g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l 119 (430)
.++|+|++|+ .||++++++|+|.+...... ..++|+.||++|+|+||+.+.....| ....+
T Consensus 3 ~l~v~G~~i~d~nG~~~~l~Gvn~~~~w~~~--------~~~~~~~lk~~G~N~VRi~~~~~~~w----------~~~~~ 64 (302)
T 1bqc_A 3 GLHVKNGRLYEANGQEFIIRGVSHPHNWYPQ--------HTQAFADIKSHGANTVRVVLSNGVRW----------SKNGP 64 (302)
T ss_dssp CSEEETTEEECTTSCBCCCEEEEECTTTCTT--------CTTHHHHHHHTTCSEEEEEECCSSSS----------CCCCH
T ss_pred ceEEeCCEEECCCCCEEEEEEeecccccCcc--------hHHHHHHHHHcCCCEEEEEccCCccc----------CCCCH
Confidence 4689999999 49999999999953111110 12789999999999999965311112 22247
Q ss_pred HHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 120 KALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+.+|++|++|.++||+|||++|+.. |.. .. .++...+.+.++|+.|++|
T Consensus 65 ~~ld~~v~~a~~~Gi~Vild~h~~~---~~~---------------~~-----~~~~~~~~~~~~w~~ia~~-------- 113 (302)
T 1bqc_A 65 SDVANVISLCKQNRLICMLEVHDTT---GYG---------------EQ-----SGASTLDQAVDYWIELKSV-------- 113 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEGGGT---TTT---------------TS-----TTCCCHHHHHHHHHHTHHH--------
T ss_pred HHHHHHHHHHHHCCCEEEEEeccCC---CCC---------------CC-----CchhhHHHHHHHHHHHHHH--------
Confidence 9999999999999999999998631 100 00 1234577889999999999
Q ss_pred ccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhh-ccCcchh
Q 014151 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWAS-ALGSDFI 278 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~-~~g~df~ 278 (430)
||++|+|++|+|+|||........+.+..++++++++||+.||+++|++|..++ +... .+.. ..+.++.
T Consensus 114 ~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~-~~~~---------~~~~~~~~~~~~ 183 (302)
T 1bqc_A 114 LQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNW-GQDW---------TNTMRNNADQVY 183 (302)
T ss_dssp HTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTT-TTCT---------TCHHHHHHHHHH
T ss_pred hcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCcc-ccCc---------hhhhhccchhcc
Confidence 999999999999999986532101237788999999999999999999985433 2110 0000 0000111
Q ss_pred hccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHH
Q 014151 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD 358 (430)
Q Consensus 279 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~ 358 (430)
.....++ +++++|.|+.. .. . + .++..++.+.+ .++|++|+|||....... . .++.+++
T Consensus 184 ~~~~~~~-~v~s~H~Y~~~-~~----~---~----~~~~~~~~~~~-~~~Pv~igEfG~~~~~~~---~----~~~~~~~ 242 (302)
T 1bqc_A 184 ASDPTGN-TVFSIHMYGVY-SQ----A---S----TITSYLEHFVN-AGLPLIIGEFGHDHSDGN---P----DEDTIMA 242 (302)
T ss_dssp HTCTTCC-EEEEEEESGGG-CS----H---H----HHHHHHHHHHH-HTCCEEEEEECCTTSTTC---C----CHHHHHH
T ss_pred ccCCCCC-EEEEEEEccCC-CC----H---H----HHHHHHHHHHH-CCCCEEEEeecCCCCCCc---h----HHHHHHH
Confidence 1112233 47899999863 11 1 1 12333334443 789999999999876421 1 1333444
Q ss_pred HHHHHHhcCCCcccceeeeeccC
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.+.+ . .+|+++|+|.+.
T Consensus 243 ~~~~----~--~i~~~~W~~~~~ 259 (302)
T 1bqc_A 243 EAER----L--KLGYIGWSWSGN 259 (302)
T ss_dssp HHHH----H--TCEEEESCSSCC
T ss_pred HHHH----c--CCEEEEeeccCC
Confidence 3322 2 579999999875
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=240.73 Aligned_cols=256 Identities=17% Similarity=0.244 Sum_probs=171.4
Q ss_pred CCCcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
..|+|+|+|++|+. ||+||+++|+|.++..... ....+++|+.++ ++|+|+||+.+. |.. .....+
T Consensus 7 ~~~~l~v~G~~i~d~~G~~v~l~Gvn~~~~~w~~-----~~~~~~d~~~l~~~~G~N~vRi~~~----~~~---~~~~~~ 74 (306)
T 2cks_A 7 RYGKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFD-----HCLTDSSLDALAYDWKADIIRLSMY----IQE---DGYETN 74 (306)
T ss_dssp HHCSCEEETTEEECTTSCBCCCEEEECCCHHHHG-----GGCSHHHHHHHHHTSCCSEEEEEEE----SST---TSGGGC
T ss_pred CCCeEEEECCEEECCCCCEEEEEEEecCcccccC-----cCCCHHHHHHHHHHcCCCEEEEEee----ecC---CCcccC
Confidence 46899999999984 9999999999987543321 111257888775 699999999553 211 112356
Q ss_pred hH-HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 116 ER-VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 116 e~-~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
++ .++.||++|++|.++||+|||++|... +|.+ ....+.+.++|+.|++|
T Consensus 75 ~~~~l~~ld~~v~~a~~~Gl~vild~h~~~---~g~~-----------------------~~~~~~~~~~~~~ia~~--- 125 (306)
T 2cks_A 75 PRGFTDRMHQLIDMATARGLYVIVDWHILT---PGDP-----------------------HYNLDRAKTFFAEIAQR--- 125 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCS---SCCG-----------------------GGGHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEecCCC---CCCc-----------------------ccCHHHHHHHHHHHHHH---
Confidence 65 789999999999999999999998631 1110 01256778999999999
Q ss_pred cccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG 274 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g 274 (430)
||++|+|+ |+|+|||... +...+.+++++++++||+.||+|+|++|..++ +.. ..|. |
T Consensus 126 -----y~~~~~V~-~el~NEP~~~---~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~-~~~---------~~~~---~ 183 (306)
T 2cks_A 126 -----HASKTNVL-YEIANEPNGV---SWASIKSYAEEVIPVIRQRDPDSVIIVGTRGW-SSL---------GVSE---G 183 (306)
T ss_dssp -----HTTCSSEE-EECCSCCCSS---CHHHHHHHHHHHHHHHHHHCTTCCEEECCHHH-HST---------TGGG---T
T ss_pred -----hCCCCcEE-EEcCCCCCCC---CHHHHHHHHHHHHHHHHHhCCCCEEEECCCCc-ccc---------cccc---c
Confidence 99999998 9999999874 24567889999999999999999999985332 110 0110 1
Q ss_pred cchhhccCCC---CcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-C-CChhHH
Q 014151 275 SDFIRNSNND---NIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-G-FEPSLR 349 (430)
Q Consensus 275 ~df~~~~~~~---~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-~-~~~~~r 349 (430)
.+.......| .-+++++|+|+... . . . +...++.+. .++|++|||||...... + .+.+
T Consensus 184 ~~~~~~~~~p~~~~~~v~s~H~Y~~~~-~-~------~-----~~~~~~~~~--~~~Pv~igEfG~~~~~g~~~~~~~-- 246 (306)
T 2cks_A 184 SGPAEIAANPVNASNIMYAFHFYAASH-R-D------N-----YLNALREAS--ELFPVFVTEFGTETYTGDGANDFQ-- 246 (306)
T ss_dssp CCTHHHHHSCCSCSSEEEEEEEETTTC-C-H------H-----HHHHHHHHH--HHSCEEEEEEESSCTTSCSCCCHH--
T ss_pred cchhhhhcCCCCcCCeEEEEeeCCCCc-c-H------H-----HHHHHHHHh--cCCcEEEEcccCCcCCCCCCcCHH--
Confidence 1111111111 23578999998642 1 0 1 112222222 47999999999976421 1 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 350 DKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+++.+++.+.+. .+|+++|+|.+.
T Consensus 247 --~~~~~~~~~~~~------~ig~~~W~~~~~ 270 (306)
T 2cks_A 247 --MADRYIDLMAER------KIGWTKWNYSDD 270 (306)
T ss_dssp --HHHHHHHHHHHH------TCCEEEECCSCC
T ss_pred --HHHHHHHHHHHc------CCCeEEEecCCC
Confidence 333444433321 479999999875
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=237.69 Aligned_cols=266 Identities=17% Similarity=0.294 Sum_probs=182.7
Q ss_pred EEeeecc-cccc-ccCC--CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC--CCCChHHHHHHHHHHHHHHH
Q 014151 58 VNGWNSY-WLMD-HAVH--DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP--GQFDERVFKALDHVIVEARK 131 (430)
Q Consensus 58 ~~G~N~~-~~~~-~~~~--~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p--g~~de~~l~~lD~~l~~A~~ 131 (430)
++|+|+- |+.. .... .++....+++|+.|+++|+|+||+.+. |..+++.+ |.+++..++.||++|++|.+
T Consensus 5 ~~G~Nlg~~~~~~~~~~~~~~~~~~~~~d~~~i~~~G~n~vRi~i~----~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~ 80 (343)
T 1ceo_A 5 KAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFD----YPIIESDDNVGEYKEDGLSYIDRCLEWCKK 80 (343)
T ss_dssp SEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEE----GGGTBCSSSTTCBCHHHHHHHHHHHHHHHH
T ss_pred cceeehhhhhccCCccchhhhhcccCHHHHHHHHHcCCCEEEecCC----HHHhccccCCCcccHHHHHHHHHHHHHHHH
Confidence 5799974 3322 1000 011223478999999999999999653 44455543 88999999999999999999
Q ss_pred cCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEee
Q 014151 132 NGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL 211 (430)
Q Consensus 132 ~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel 211 (430)
+||+|||++|.. .|+ .|.. .....+|.+++.++.+.++++.|++| |+++|.|++|+|
T Consensus 81 ~Gi~vildlh~~---~g~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~~el 137 (343)
T 1ceo_A 81 YNLGLVLDMHHA---PGY-----RFQD-------FKTSTLFEDPNQQKRFVDIWRFLAKR--------YINEREHIAFEL 137 (343)
T ss_dssp TTCEEEEEEEEC---CC--------------------CCTTTCHHHHHHHHHHHHHHHHH--------TTTCCSSEEEEC
T ss_pred CCCEEEEEecCC---Ccc-----ccCC-------CCcccCcCCHHHHHHHHHHHHHHHHH--------hcCCCCeEEEEe
Confidence 999999999863 222 1211 01136789999999999999999999 999999999999
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEe
Q 014151 212 INEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASV 291 (430)
Q Consensus 212 ~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~ 291 (430)
+|||.... .+.+.+++++++++||++||+++|+++..++.+ . ..|. .+ .....+++ ++++
T Consensus 138 ~NEP~~~~---~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~~~~-~---------~~~~-----~~-~~~~~~~~-v~~~ 197 (343)
T 1ceo_A 138 LNQVVEPD---STRWNKLMLECIKAIREIDSTMWLYIGGNNYNS-P---------DELK-----NL-ADIDDDYI-VYNF 197 (343)
T ss_dssp CSCCCCSS---SHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHC-G---------GGGG-----GS-CCCCCSSE-EEEE
T ss_pred ccCCCCcc---hHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcCC-H---------HHHh-----hc-CcCCCCCE-EEEe
Confidence 99999753 467899999999999999999999998543211 0 0111 01 11122344 7899
Q ss_pred eecCC--------CCCCC-------cchhh--------------------------hHHHHHHHHHHHHHhhhhcCCCcE
Q 014151 292 HIYPD--------HWFHD-------LEFED--------------------------DLKFVTKWMLSHIEDGDKELNKPV 330 (430)
Q Consensus 292 H~Y~~--------~w~~~-------~~~~~--------------------------~~~~~~~~l~~~~~~a~~~~gkPv 330 (430)
|.|.+ .|... ..++. ..+.+...+....+.+.+ .++||
T Consensus 198 H~Y~~~~ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~Pv 276 (343)
T 1ceo_A 198 HFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREK-KKCKL 276 (343)
T ss_dssp EECCSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHH-HCCEE
T ss_pred eccCccccCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhccccccCHHHHHHHHHHHHHHHHH-hCCCE
Confidence 99964 24320 00000 012233344444444554 89999
Q ss_pred EEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 331 FFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 331 ~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
+|+|||..... +.+.+.+|++.+++.+.+ ..+|+++|++.+
T Consensus 277 ~igEfG~~~~~---~~~~~~~~~~~~~~~~~~------~~ig~~~W~~~~ 317 (343)
T 1ceo_A 277 YCGEFGVIAIA---DLESRIKWHEDYISLLEE------YDIGGAVWNYKK 317 (343)
T ss_dssp EEEEECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCSBS
T ss_pred EecccccccCC---ChHHHHHHHHHHHHHHHH------cCCCeEEeecCC
Confidence 99999988753 346778888887765543 258999999976
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=231.82 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=168.9
Q ss_pred EEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHH
Q 014151 42 VTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFK 120 (430)
Q Consensus 42 v~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~ 120 (430)
++|+|++|+. ||+||+++|+|.. ..+. ....+++|+.|+++|+|+||+.+. ++ +.|+++.++
T Consensus 2 l~v~G~~i~d~~G~~~~lrGvn~~-~~w~------~~~~~~~~~~i~~~G~N~VRi~~~-~~---------~~~~~~~~~ 64 (294)
T 2whl_A 2 FSVDGNTLYDANGQPFVMRGINHG-HAWY------KDTASTAIPAIAEQGANTIRIVLS-DG---------GQWEKDDID 64 (294)
T ss_dssp CEEETTEEECTTSCBCCCEEEEEC-GGGC------GGGHHHHHHHHHHTTCSEEEEEEC-CS---------SSSCCCCHH
T ss_pred eEEECCEEECCCCCEEEEEEeecc-cccC------CcchHHHHHHHHHcCCCEEEEEec-CC---------CccCccHHH
Confidence 4799999997 9999999999952 1111 223678999999999999999542 21 234556799
Q ss_pred HHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
++|++|++|+++||+|||++|.. +| +.+....+.+.++|+.|++| |
T Consensus 65 ~ld~~v~~a~~~Gi~Vild~H~~----~~----------------------~~~~~~~~~~~~~w~~ia~~--------y 110 (294)
T 2whl_A 65 TIREVIELAEQNKMVAVVEVHDA----TG----------------------RDSRSDLNRAVDYWIEMKDA--------L 110 (294)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTT----TT----------------------CCCHHHHHHHHHHHHHTHHH--------H
T ss_pred HHHHHHHHHHHCCCEEEEEeccC----CC----------------------CCcchhHHHHHHHHHHHHHH--------H
Confidence 99999999999999999999852 11 11235678899999999999 9
Q ss_pred cCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc
Q 014151 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN 280 (430)
Q Consensus 201 k~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~ 280 (430)
|++|..++|+|+|||.... +...+.+++++++++||+.||+++|++|..++ +.. + .+....+.++...
T Consensus 111 ~~~~~~v~~el~NEP~~~~--~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~-~~~--------~-~~~~~~~~~~~~~ 178 (294)
T 2whl_A 111 IGKEDTVIINIANEWYGSW--DGSAWADGYIDVIPKLRDAGLTHTLMVDAAGW-GQY--------P-QSIHDYGQDVFNA 178 (294)
T ss_dssp TTCTTTEEEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTB--------T-HHHHHHHHHHHHT
T ss_pred cCCCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC-CCC--------c-hhhhhhhhccccC
Confidence 9995444799999998631 34566778889999999999999999985432 110 0 0000000011110
Q ss_pred cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHH
Q 014151 281 SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360 (430)
Q Consensus 281 ~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~ 360 (430)
-..++ +++++|.|+.. . . .. ..++.+++.+.+ .++|++|+|||.... + . +++.+++.+
T Consensus 179 d~~~n-~v~s~H~Y~~~-~-~--~~-------~~~~~~~~~~~~-~~~Pv~igEfG~~~~-~-~-------~~~~~~~~~ 236 (294)
T 2whl_A 179 DPLKN-TMFSIHMYEYA-G-G--DA-------NTVRSNIDRVID-QDLALVIGEFGHRHT-D-V-------DEDTILSYS 236 (294)
T ss_dssp CTTCC-EEEEEEESTTT-T-S--SH-------HHHHHHHHHHHT-TTCCEEEEEECCCCC-C-C-------CHHHHHHHH
T ss_pred CCcCC-EEEEEEeccCC-C-C--cH-------HHHHHHHHHHHH-CCCCEEEEccCCCCC-C-c-------cHHHHHHHH
Confidence 01123 37899999632 1 1 11 123344445554 899999999998765 2 1 133444433
Q ss_pred HHHHhcCCCcccceeeeeccCC
Q 014151 361 YKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 361 ~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
.+ ..+|+++|+|.+.+
T Consensus 237 ~~------~~i~w~~W~~~~~~ 252 (294)
T 2whl_A 237 EE------TGTGWLAWSWKGNS 252 (294)
T ss_dssp HH------HTCEEEESCSSCCC
T ss_pred HH------cCCeEEEEEecCCC
Confidence 32 25799999999763
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-27 Score=232.68 Aligned_cols=237 Identities=16% Similarity=0.224 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCcccc--CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
..+++|+.||++|+|+||+.+ .|..+++ .++.++++.++.+|++|++|.++||+|||++|+. ..
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i----~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~----------~~ 107 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPI----RWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHF----------EE 107 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECC----CGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCC----------HH
T ss_pred CCHHHHHHHHHCCCCEEEEee----ehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCC----------cc
Confidence 458999999999999999954 3655654 3567899999999999999999999999999862 11
Q ss_pred hhhhhCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHH
Q 014151 156 WAWEEGIGISSSNDSFFFDP-SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMS 234 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~-~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~ 234 (430)
++.++ ..++.+.++++.|++| |+++|+|++|+++|||.... +.+.+.++++++.
T Consensus 108 ---------------~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~vv~~~l~NEP~~~~--~~~~~~~~~~~~~ 162 (320)
T 3nco_A 108 ---------------LYQAPDKYGPVLVEIWKQVAQA--------FKDYPDKLFFEIFNEPAQNL--TPTKWNELYPKVL 162 (320)
T ss_dssp ---------------HHHCHHHHHHHHHHHHHHHHHH--------HTTSCTTEEEECCSCCCTTS--CHHHHHHHHHHHH
T ss_pred ---------------cccCcHHHHHHHHHHHHHHHHH--------HcCCCceEEEEeccCCCCCC--CHHHHHHHHHHHH
Confidence 12344 5789999999999999 99999999999999999753 3578899999999
Q ss_pred HHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCC--------CCCCCcc---
Q 014151 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPD--------HWFHDLE--- 303 (430)
Q Consensus 235 ~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~--------~w~~~~~--- 303 (430)
++||+.||+++|++|...+ +.. ....... .....-+++++|.|.+ .|.....
T Consensus 163 ~~IR~~dp~~~i~v~~~~~-~~~---------------~~~~~~~-~~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~ 225 (320)
T 3nco_A 163 GEIRKTNPSRIVIIDVPNW-SNY---------------SYVRELK-LVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIG 225 (320)
T ss_dssp HHHHHHCSSCCEEEECSGG-GBG---------------GGGGGCC-CCSCTTEEEEEEECCSHHHHTTTCTTSSSCCCSC
T ss_pred HHHHhcCCCcEEEECCCCc-Cch---------------hHHhcCC-CCCCCCeEEEEEecCCeeeEeccccccCCCCCCC
Confidence 9999999999999985322 110 0000000 1113445899999964 1322110
Q ss_pred --h---hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeee
Q 014151 304 --F---EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL 378 (430)
Q Consensus 304 --~---~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~ 378 (430)
. ....+.+...+....+.+++ .++||+|+|||+.... +.+.|..|++.+.+.+.+ ..+|+++|++
T Consensus 226 ~~w~g~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~~------~gi~~~~W~~ 295 (320)
T 3nco_A 226 VKWEGKDWEVEQIRNHFKYVSEWAKK-NNVPIFLGEFGAYSKA---DMESRVKWTKTVRRIAEE------FGFSLAYWEF 295 (320)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCS
T ss_pred CCCCCchhhHHHHHHHHHHHHHHHHH-cCCCEEEeeeeeecCC---CHHHHHHHHHHHHHHHHH------cCCeEEEEec
Confidence 0 01112333344444444554 7999999999987654 467788888887765543 2589999998
Q ss_pred cc
Q 014151 379 FV 380 (430)
Q Consensus 379 ~~ 380 (430)
++
T Consensus 296 ~~ 297 (320)
T 3nco_A 296 CA 297 (320)
T ss_dssp SG
T ss_pred CC
Confidence 64
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-29 Score=248.96 Aligned_cols=272 Identities=15% Similarity=0.197 Sum_probs=176.0
Q ss_pred CCCCcEEEeCC-eEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCC
Q 014151 37 PEMGFVTRNGT-HFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 37 ~~~gfv~~~g~-~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
.+.+||+++|+ +|+. +|+||+++|+|.++..... ....+++|+.|+ ++|+|+||+.+. |. ..+..
T Consensus 16 ~~~~~~~v~G~~~lvd~~G~~~~lrGvn~~~~~~~~-----~~~~~~d~~~l~~~~G~N~VRip~~----~~---~~~~~ 83 (364)
T 1g01_A 16 GALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFG-----EIVNENAFVALSNDWGSNMIRLAMY----IG---ENGYA 83 (364)
T ss_dssp CSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHTTSCCSEEEEEEE----SS---SSSTT
T ss_pred CCCCcEEecCCeeEECCCCCEEEEEEEecCcccccC-----CccCHHHHHHHHHHCCCCEEEEEee----eC---CCCCc
Confidence 35689999999 6775 8999999999987644322 112357889986 999999999654 31 12346
Q ss_pred CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
++++.++.||++|++|.++||+|||++|... .|+.. ..+ .+.+.++|+.|++|
T Consensus 84 ~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~--~g~~~-----------------~~~------~~~~~~~w~~ia~~-- 136 (364)
T 1g01_A 84 TNPEVKDLVYEGIELAFEHDMYVIVDWHVHA--PGDPR-----------------ADV------YSGAYDFFEEIADH-- 136 (364)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCEEEEEEECCS--SSCTT-----------------SGG------GTTHHHHHHHHHHH--
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEeccCC--CCCCC-----------------hHH------HHHHHHHHHHHHHH--
Confidence 7889999999999999999999999998631 22110 011 12468899999999
Q ss_pred Cccccccc---CCCceeEEeecCCCCCCCC------CCh---HHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCC
Q 014151 194 TITGVEYR---NDPTIFAWELINEPRCMSD------PSG---DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKR 261 (430)
Q Consensus 194 ~~tg~~yk---~~p~I~~wel~NEp~~~~~------~~~---~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~ 261 (430)
|+ ++|+|+ |+|+|||..... .+. ..+.+|+++++++||+.| +|+|++|..++ +..
T Consensus 137 ------y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v~~~~w-~~~---- 203 (364)
T 1g01_A 137 ------YKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILVGNPNW-SQR---- 203 (364)
T ss_dssp ------HTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCHHH-HTC----
T ss_pred ------hhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCCc-ccc----
Confidence 99 789997 999999986421 012 345778999999999999 99999975332 110
Q ss_pred cccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCC-cchhh-hHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCC
Q 014151 262 LTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD-LEFED-DLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339 (430)
Q Consensus 262 ~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~-~~~~~-~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~ 339 (430)
. .+.. ...+..+++ ++++|.|+...... ...+. ..++.+..+..+...+.+ .++||+|||||...
T Consensus 204 ----~-~~~~------~~p~~~~ni-v~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~Pv~igEfG~~~ 270 (364)
T 1g01_A 204 ----P-DLSA------DNPIDAENI-MYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALD-NGVAVFATEWGTSQ 270 (364)
T ss_dssp ----H-HHHH------HSCCSSSSE-EEEEEEETTTSCCCCCCCCTTCCGGGCCCHHHHHHHHHH-TTCCEEEEEEESSB
T ss_pred ----c-chhh------cCCCCCCCE-EEEEEecCCccCCCCCCCCCCchHHHHHHHHHHHHHHHH-CCCeEEEEcccccc
Confidence 0 0100 001122344 78999998743211 00100 000111123344444554 79999999999976
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 340 LIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 340 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.... .... .++++.+++.+.+ ..+|+++|+|.+.
T Consensus 271 ~~~~-~~~~-~~~~~~~~~~~~~------~~ig~~~W~~~~~ 304 (364)
T 1g01_A 271 ANGD-GGPY-FDEADVWLNFLNK------HNISWANWSLTNK 304 (364)
T ss_dssp TTTB-SCCC-HHHHHHHHHHHHH------TTCCEEEEEECCS
T ss_pred CCCC-CCcC-HHHHHHHHHHHHH------CCCceEEEeCCCC
Confidence 4310 0011 2334445543322 2589999999875
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=245.37 Aligned_cols=257 Identities=15% Similarity=0.163 Sum_probs=173.5
Q ss_pred CCCCcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 37 PEMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
++.++|+|+|++|+. +|+||+++|+|. ...+ .....+++|+.|+++|+|+||+.+. ++ +.|.
T Consensus 5 ~~~~~l~v~G~~i~d~nG~~v~lrGvN~-~~~W------~~~~~~~di~~ik~~G~N~VRipv~-~g---------~~~~ 67 (464)
T 1wky_A 5 NANSGFYVSGTTLYDANGNPFVMRGINH-GHAW------YKDQATTAIEGIANTGANTVRIVLS-DG---------GQWT 67 (464)
T ss_dssp C--CCCEEETTEEECTTSCBCCCEEEEE-CGGG------CGGGHHHHHHHHHTTTCSEEEEEEC-CS---------SSSC
T ss_pred CCCCCeEEeCCEEECCCCCEEEEEEEEe-Cccc------CCcchHHHHHHHHHCCCCEEEEEcC-CC---------CccC
Confidence 466899999999997 999999999994 2211 1233678999999999999999542 21 2344
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
++.+++||++|++|.++||+|||++|.. .| +.++...+.+.++|+.|++|
T Consensus 68 ~~~l~~ld~vv~~a~~~Gl~VIlDlH~~----~g----------------------~~~~~~~~~~~~~w~~iA~r---- 117 (464)
T 1wky_A 68 KDDIQTVRNLISLAEDNNLVAVLEVHDA----TG----------------------YDSIASLNRAVDYWIEMRSA---- 117 (464)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECTT----TT----------------------CCCHHHHHHHHHHHHHTGGG----
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecCC----CC----------------------CCChHHHHHHHHHHHHHHHH----
Confidence 5679999999999999999999999852 11 11245788899999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
||++|..++|||+|||.... +...+.+++++++++||+.||+++|+++..++ +.. ..+....+.
T Consensus 118 ----yk~~~~~Vi~eL~NEP~~~~--~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w-~~~---------~~~~~~~~~ 181 (464)
T 1wky_A 118 ----LIGKEDTVIINIANEWFGSW--DGAAWADGYKQAIPRLRNAGLNNTLMIDAAGW-GQF---------PQSIHDYGR 181 (464)
T ss_dssp ----TTTCTTTEEEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTB---------THHHHHHHH
T ss_pred ----HcCCCCeEEEEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCc-Ccc---------cccccccch
Confidence 99995444799999998642 34567788899999999999999999985432 110 000000000
Q ss_pred chhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKT 355 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~ 355 (430)
++...-..++ +++++|+|+.. . . . ...++.+++.+.+ .++|++|+|||........ . ++.
T Consensus 182 ~l~~~dp~~n-iv~s~H~Y~~~-g-~--~-------~~~i~~~~~~~~~-~g~Pv~igEfG~~~~~~~~---~----~~~ 241 (464)
T 1wky_A 182 EVFNADPQRN-TMFSIHMYEYA-G-G--N-------ASQVRTNIDRVLN-QDLALVIGEFGHRHTNGDV---D----EST 241 (464)
T ss_dssp HHHHTCTTCC-EEEEEEESTTT-S-S--S-------HHHHHHHHHHHHT-TTCCEEEEEECSEETTEEC---C----HHH
T ss_pred hccccCCCCC-EEEEEEEECCC-C-C--C-------HHHHHHHHHHHHH-cCCCEEEECccCCCCCCcH---H----HHH
Confidence 1111001233 47899999732 1 1 1 1224444455554 7999999999998643111 1 133
Q ss_pred HHHHHHHHHhcCCCcccceeeeeccCC
Q 014151 356 ILDIVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 356 ~~~~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
+++.+. + ..+|+++|+|.+++
T Consensus 242 ~~~~~~----~--~~igw~~W~~~~~~ 262 (464)
T 1wky_A 242 IMSYSE----Q--RGVGWLAWSWKGNG 262 (464)
T ss_dssp HHHHHH----H--TTCEEEESCSSCCC
T ss_pred HHHHHH----H--cCCeEEEEEEcCCC
Confidence 333222 2 25799999999864
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=243.62 Aligned_cols=298 Identities=16% Similarity=0.277 Sum_probs=202.1
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||+|++++|+|.|..........+.+.++++++.||++|+|+||+.. ++. +
T Consensus 270 ~~G~R~v~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~di~l~k~~g~N~vR~~h-----yp~--------~ 336 (605)
T 3lpf_A 270 RVGIRSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSH-----YPY--------A 336 (605)
T ss_dssp EECCCCEEEETTEEEETTEECCEEEEEECSCCTTTTTCCCHHHHHHHHHHHHHHTCCEEEECS-----SCC--------C
T ss_pred eeeeEEEEEcCCEEEECCEEEEEEeeecCcCcccccccCCHHHHHHHHHHHHHCCCcEEEecC-----CCC--------c
Confidence 4577 777899999999999999999875543322345788999999999999999999943 211 1
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCccc-CCCcchhhhhhhhhCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHh
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQA-YGGKTQYVNWAWEEGIGISSSNDSFF----FDPSIHKYFKHYVKTVLT 190 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~-~gg~~~y~~W~~~~G~~~~~~~~~f~----~d~~~~~~~~~~~~~lv~ 190 (430)
++++++|+++||+|+..+...... ..|. .|. .+ ......| .+++.++.+.+.++.+++
T Consensus 337 -------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~----~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 399 (605)
T 3lpf_A 337 -------EEMLDWADEHGIVVIDETAAVGFNLSLGI----GFE--AG----NKPKELYSEEAVNGETQQAHLQAIKELIA 399 (605)
T ss_dssp -------HHHHHHHHHHTCEEEEECSCBCCCSSCCC----SCC--CC----CCCSCSSSTTTSCHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhcCCEEEEecccccccccccc----ccc--cc----cCccccccccccCHHHHHHHHHHHHHHHH
Confidence 367999999999999987541100 0010 010 01 1111223 368899999999999999
Q ss_pred ccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchh
Q 014151 191 RKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWA 270 (430)
Q Consensus 191 R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~ 270 (430)
| ++|||+|++|.++||+.... .....++++|.+.||++||+|+|+.+...... ..
T Consensus 400 r--------~~NHPSIi~Ws~gNE~~~~~----~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~-~~------------ 454 (605)
T 3lpf_A 400 R--------DKNHPSVVMWSIANEPDTRP----QGAREYFAPLAEATRKLDPTRPITCVNVMFCD-AH------------ 454 (605)
T ss_dssp H--------HTTCTTEEEEEEEESCCCCS----TTHHHHHHHHHHHHHHHCSSSCEEEEEETTSC-TT------------
T ss_pred H--------cCCCCeEEEEecCccccccc----chHHHHHHHHHHHHHHHCCCCcEEEeccccCc-cc------------
Confidence 9 99999999999999997532 23567899999999999999999986422110 00
Q ss_pred hccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHH-hhhhcCCCcEEEEecCCCCCC-------C
Q 014151 271 SALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE-DGDKELNKPVFFTEYGLSNLI-------K 342 (430)
Q Consensus 271 ~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~-~a~~~~gkPv~v~EfG~~~~~-------~ 342 (430)
.+...+.+|++++|.|..++......+ -...++...+. ...+ .+|||+++|||+.... .
T Consensus 455 --------~d~~~~~~Dvig~N~Y~gwY~~~g~~~----~~~~~l~~~~~~w~~~-~~KPiiisEyGa~~~~g~h~~~~~ 521 (605)
T 3lpf_A 455 --------TDTISDLFDVLCLNRYYGWYVQSGDLE----TAEKVLEKELLAWQEK-LHQPIIITEYGVDTLAGLHSMYTD 521 (605)
T ss_dssp --------TCSSGGGSSSEEEECCBTTTBSTTCHH----HHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCTTCCCSSCC
T ss_pred --------ccccccccceeeeccccccccCCCchH----HHHHHHHHHHHHHhhc-cCCCeEEEeeCCCCCcCcccCCCC
Confidence 001234689999999987433222222 12223333222 2232 7999999999976532 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCcc--C---CCCceEEcCCC-c-cHHHHHHHH
Q 014151 343 GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEE--Y---NDDFGIVPWER-T-STYKLLTEQ 407 (430)
Q Consensus 343 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~--~---~dg~~i~~~~~-~-~~~~~~~~~ 407 (430)
.++++++..+++..++.+.+ .+...|.++|.|.|..... | .+..+|+..+. | ...-++++.
T Consensus 522 ~~sEeyq~~~~~~~~~~~~~----~~~~~G~~iW~~~Df~~~~~~~~~~~n~kGl~t~dr~pK~a~~~~~~~ 589 (605)
T 3lpf_A 522 MWSEEYQCAWLDMYHRVFDR----VSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKR 589 (605)
T ss_dssp TTSHHHHHHHHHHHHHHHTT----CTTEEEEEEEEEECBCBCCBTTBSSSBCCEEECTTCCBCTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc----CCcEEEEEEEEeeeecCccCCccccCCCCccccCCCCCcHHHHHHHHH
Confidence 36888999998888775533 3468999999999975432 1 35678886542 2 233445533
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=245.44 Aligned_cols=276 Identities=18% Similarity=0.253 Sum_probs=191.2
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||+|++++|+|.|..........+.+.++++|+.||++|+|+||+.. ++ + +
T Consensus 303 ~~G~R~i~~~~~~f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~h-----~p---~-----~ 369 (613)
T 3hn3_A 303 PVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSH-----YP---Y-----A 369 (613)
T ss_dssp EECCCCEEECSSCEEETTEEECEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTT-----SC---C-----C
T ss_pred ccCceEEEEECCEEEECCEEeeeceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEccC-----CC---C-----h
Confidence 4577 677799999999999999999875433222345789999999999999999999832 21 1 1
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
++++++|+++||+|+..++. |. . .++ . +.++...+.+++.++.++.|
T Consensus 370 -------~~~~~~cD~~Gi~V~~e~~~-~~----~-~~~---------------~-~~~~~~~~~~~~~~~~~v~r---- 416 (613)
T 3hn3_A 370 -------EEVMQMCDRYGIVVIDECPG-VG----L-ALP---------------Q-FFNNVSLHHHMQVMEEVVRR---- 416 (613)
T ss_dssp -------HHHHHHHHHHTCEEEEECSC-BC----C-CSG---------------G-GCCHHHHHHHHHHHHHHHHH----
T ss_pred -------HHHHHHHHHCCCEEEEeccc-cc----c-ccc---------------c-ccChHHHHHHHHHHHHHHHH----
Confidence 26799999999999998753 21 0 001 1 22467788899999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
++|||+|++|+++|||.... +...++++++.+.||++||+|+|+.++.+.+.
T Consensus 417 ----~~nhPSIi~W~~~NE~~~~~----~~~~~~~~~l~~~~k~~DptRpv~~~~~~~~~-------------------- 468 (613)
T 3hn3_A 417 ----DKNHPAVVMWSVANEPASHL----ESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYA-------------------- 468 (613)
T ss_dssp ----HTTCTTEEEEEEEESCCTTS----HHHHHHHHHHHHHHHHHCTTSCEEEEECSCTT--------------------
T ss_pred ----hCCCCeEEEEecccCccccc----chHHHHHHHHHHHHHHhCCCCCEEEEcccCcc--------------------
Confidence 99999999999999998642 45678999999999999999999985422110
Q ss_pred chhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC-------CCCChhH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI-------KGFEPSL 348 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-------~~~~~~~ 348 (430)
.......+|++++|.|+.++......... .............+ .+||++++|||..... ..++++.
T Consensus 469 ---~~~~~~~~Dv~~~n~Y~~wy~~~~~~~~~---~~~l~~~~~~~~~~-~~kPi~isE~G~~~~~g~~~~~~~~~seey 541 (613)
T 3hn3_A 469 ---ADKGAPYVDVICLNSYYSWYHDYGHLELI---QLQLATQFENWYKK-YQKPIIQSEYGAETIAGFHQDPPLMFTEEY 541 (613)
T ss_dssp ---TCSSGGGCSSEEEECCBTTTBSTTCGGGH---HHHHHHHHHHHHHH-HCSCEEEEECCCCBCTTCCCSSCCTBSHHH
T ss_pred ---ccccccccceeEEeccccccCCCccHHHH---HHHHHHHHHHHHHh-cCCCEEEEeeCCCCCCCcccCCCCCCCHHH
Confidence 00122457999999999744332222111 11111111122233 6899999999997532 1246889
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCcc--C---CCCceEEcCC
Q 014151 349 RDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEE--Y---NDDFGIVPWE 396 (430)
Q Consensus 349 r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~--~---~dg~~i~~~~ 396 (430)
|..+++..++.+.+..+ ..++|+++|++.|..... + ..-++|+..+
T Consensus 542 Q~~~~~~~~~~~~~~~~--~~~~G~~~W~~~Df~~~~~~~~~~~n~kGl~~~d 592 (613)
T 3hn3_A 542 QKSLLEQYHLGLDQKRR--KYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQ 592 (613)
T ss_dssp HHHHHHHHHHHHHTTTT--TTEEEEEESCSBCBCCCCBTTBSSSBCCCSBCTT
T ss_pred HHHHHHHHHHHHHhhcc--cceEEEEEEEeeecccccCCCcCCCCcCceECCC
Confidence 99999887765533222 368999999999874321 1 1346666543
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=227.14 Aligned_cols=251 Identities=14% Similarity=0.117 Sum_probs=170.4
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCcccc--CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 157 (430)
+++|+.|+++|+|+||+.+ .|..+++ .++.++++.++.+|++|++|.++||+|||++|+. .. |.
T Consensus 34 ~~di~~~~~~G~n~vRi~i----~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~-~~---------~~ 99 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPF----MMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNY-GR---------YY 99 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEE----CHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCT-TE---------ET
T ss_pred HHHHHHHHHCCCCEEEecc----cHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEecccc-cc---------cc
Confidence 7899999999999999954 2655666 3578999999999999999999999999999863 11 21
Q ss_pred hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHH
Q 014151 158 WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFV 237 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~I 237 (430)
|.. ..+ ++.+.++|+.|++| |+++|.| +|+|.|||... +...+.++++++.++|
T Consensus 100 ---g~~--------~~~---~~~~~~~~~~ia~~--------~~~~~~V-~~~l~NEP~~~---~~~~w~~~~~~~~~~I 153 (305)
T 1h1n_A 100 ---NSI--------ISS---PSDFETFWKTVASQ--------FASNPLV-IFDTDNEYHDM---DQTLVLNLNQAAIDGI 153 (305)
T ss_dssp ---TEE--------CCC---HHHHHHHHHHHHHT--------STTCTTE-EEECCSCCCSS---CHHHHHHHHHHHHHHH
T ss_pred ---CCc--------CCc---HHHHHHHHHHHHHH--------hCCCCeE-EEeccCCCCCC---CHHHHHHHHHHHHHHH
Confidence 100 112 77889999999999 9999999 99999999975 3577889999999999
Q ss_pred HhcCC-CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCC-CcceEEeeecCCCCCCCcchhh-hHHHHHHH
Q 014151 238 KSIDK-KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNND-NIDFASVHIYPDHWFHDLEFED-DLKFVTKW 314 (430)
Q Consensus 238 r~~dp-~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~-~iD~~s~H~Y~~~w~~~~~~~~-~~~~~~~~ 314 (430)
|+.+| +++|+++..++.+. ..|... + +....+..| .-.++++|.|++.+.......+ ......+.
T Consensus 154 R~~~~~~~~I~v~g~~~~~~----------~~~~~~-~-~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~~~~~~~ 221 (305)
T 1h1n_A 154 RSAGATSQYIFVEGNSWTGA----------WTWTNV-N-DNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQER 221 (305)
T ss_dssp HHTTCCSSCEEEECTGGGBS----------TTHHHH-S-GGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCTTHHHHH
T ss_pred HhcCCCccEEEEccccccCc----------cccccc-C-cccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCcchHHHH
Confidence 99998 99999975443111 112110 0 011111222 2337899999865432110000 01123334
Q ss_pred HHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcC-CCcccceeeeeccCCCccCC-CCceE
Q 014151 315 MLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRK-RSGAGALIWQLFVEGMEEYN-DDFGI 392 (430)
Q Consensus 315 l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~G~~~W~~~~~~~~~~~-dg~~i 392 (430)
+....+.+++ .++|++|||||.... ..+.++++.+++.+ ++. ...+|+++|++++. |+ ..|++
T Consensus 222 ~~~~~~~~~~-~g~Pv~igEfG~~~~------~~~~~~~~~~~~~~----~~~~~~~ig~~~W~~g~~----~~~y~~~~ 286 (305)
T 1h1n_A 222 ITSATQWLRA-NGKKGIIGEFAGGAD------NVCETAITGMLDYM----AQNTDVWTGAIWWAAGPW----WGDYIFSM 286 (305)
T ss_dssp HHHHHHHHHH-TTCCEEEEEEECCSS------HHHHHHHHHHHHHH----HTCTTTEEEEEEEEECTT----CTTCTTCC
T ss_pred HHHHHHHHHH-cCCcEEEEeccCCCC------hHHHHHHHHHHHHH----HHcCCeeEEEEEECCCCC----CCCCeeeE
Confidence 5555555554 899999999998652 34566777666533 222 12289999998753 22 34677
Q ss_pred EcCCC
Q 014151 393 VPWER 397 (430)
Q Consensus 393 ~~~~~ 397 (430)
.+.++
T Consensus 287 ~~~~g 291 (305)
T 1h1n_A 287 EPDNG 291 (305)
T ss_dssp CTTTC
T ss_pred ECCCC
Confidence 77654
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=232.66 Aligned_cols=268 Identities=14% Similarity=0.156 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCC-cccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYN-SLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~-~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
..+++|+.|+++|+|+||+.+. |. .+++ .++.++++.++.+|++|++|.++||+|||++|+. .++.. ...
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~----w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~--~~~~~--~g~ 141 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVS----YLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD--GYNSV--QGG 141 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCC----CGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG--GCTTS--TTC
T ss_pred CcHHHHHHHHHcCCCEEEEeee----eccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc--cccCC--CCc
Confidence 4678999999999999999553 32 2344 3578999999999999999999999999999963 11100 011
Q ss_pred hhhhhCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC--Ch---HHHHHH
Q 014151 156 WAWEEGIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP--SG---DTLQDW 229 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~--~~---~~~~~w 229 (430)
|... + ..+ +..++.+.++|+.|++| |+++|.|++|+|.|||...... .. +.+.+|
T Consensus 142 w~~~----------~-~~~~~~~~~~~~~~~~~ia~~--------~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~ 202 (395)
T 2jep_A 142 WLLV----------N-GGNQTAIKEKYKKVWQQIATK--------FSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAY 202 (395)
T ss_dssp CCCT----------T-CSCHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHH
T ss_pred cccC----------C-cccHHHHHHHHHHHHHHHHHH--------hCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHH
Confidence 2100 0 112 56889999999999999 9999999999999999874321 12 467889
Q ss_pred HHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCccchhhcc-Cc----c----hhhccCCCCcceEEeeecCC-
Q 014151 230 IDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASAL-GS----D----FIRNSNNDNIDFASVHIYPD- 296 (430)
Q Consensus 230 ~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~-g~----d----f~~~~~~~~iD~~s~H~Y~~- 296 (430)
+++++++||++ +|+|+|+++.... + + .|.... +. + +......+++ ++++|+|++
T Consensus 203 ~~~~~~aIR~~~~~np~~~I~v~g~~~---~--------~-~~~~~~~~~~~p~d~~~~~~i~~~~~~~-v~s~H~Y~~~ 269 (395)
T 2jep_A 203 NQIFVDTVRQTGGNNNARWLLVPGWNT---N--------I-DYTVGNYGFTLPTDNYRSSAIPSSQKRI-MISAHYYSPW 269 (395)
T ss_dssp HHHHHHHHHTSSGGGGTSCEEEECGGG---C--------H-HHHHSSSSCCCCCCTTSCTTSCTTCCCE-EEEEEECCSH
T ss_pred HHHHHHHHHHhCCCCCCcEEEECCCcc---C--------c-ccccccccccCCCCccccccCCCCCCCE-EEEEEecCCc
Confidence 99999999999 5689999964211 0 0 111000 00 0 0000011344 899999985
Q ss_pred -----------CCCCCcchhh------hHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC--CCChhHHHHHHHHHH
Q 014151 297 -----------HWFHDLEFED------DLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK--GFEPSLRDKLYKTIL 357 (430)
Q Consensus 297 -----------~w~~~~~~~~------~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~--~~~~~~r~~~~~~~~ 357 (430)
.|......+. ..+.+...+......+.+ .++||+|||||...... ..+.+.|..|++.++
T Consensus 270 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~ 348 (395)
T 2jep_A 270 DFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQFKSMYDKFVT-QGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVT 348 (395)
T ss_dssp HHHTCSSSSCCBCSTTCSCGGGBCSSCSHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHH
T ss_pred cccCcccccccccccccCCcccccccCcHHHHHHHHHHHHHHHHH-cCCCEEEeeccccCCCCccCCChHHHHHHHHHHH
Confidence 3443111000 002233334443344444 79999999999986542 112456778887776
Q ss_pred HHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCC
Q 014151 358 DIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396 (430)
Q Consensus 358 ~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~ 396 (430)
+.+.+ . .+|+++|++.+.+ +++|++...+
T Consensus 349 ~~~~~----~--~i~~~~W~~~~~~----~~~~gl~~~~ 377 (395)
T 2jep_A 349 AKAKK----Y--KMVPVYWDNGHNG----QHGFALFNRS 377 (395)
T ss_dssp HHHHH----T--TCEEEEEECSCCS----TTCCCSEETT
T ss_pred HHHHH----C--CCeEEEECCCCCC----CCCcceeeCC
Confidence 65533 2 5799999998652 3566766543
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=222.37 Aligned_cols=258 Identities=13% Similarity=0.174 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 77 ARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 77 ~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
...+++|+.|+++|+|+||+.+ .|..+.+. ++.++++.+++||++|++|.++||+|||++|+. +
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi----~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~----------~ 107 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPV----TWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE----------N 107 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECC----CCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC----------T
T ss_pred CCcHHHHHHHHHCCCCEEEEee----ehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc----------c
Confidence 3458899999999999999954 36555553 578999999999999999999999999999863 1
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC----C-----ChHH
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----P-----SGDT 225 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----~-----~~~~ 225 (430)
.|.. ..++..+..++.+.++|+.|++| ||++|.+++|+|.|||..... . ..+.
T Consensus 108 ~w~~----------~~~~~~~~~~~~~~~~w~~iA~~--------y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~ 169 (345)
T 3ndz_A 108 EWLK----------PFYANEAQVKAQLTKVWTQIANN--------FKKYGDHLIFETMNEPRPVGASLQWTGGSYENREV 169 (345)
T ss_dssp TTCC----------CSTTTHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHH
T ss_pred cccc----------ccccchHHHHHHHHHHHHHHHHH--------HcCCCCceEEEeccCCCCCCcccccCCCCchhHHH
Confidence 2210 12355678999999999999999 999998899999999996421 0 1246
Q ss_pred HHHHHHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC-----
Q 014151 226 LQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH----- 297 (430)
Q Consensus 226 ~~~w~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~----- 297 (430)
+.++++++.++||+. +|+|+|.++...+ +.. +..+. .+......+++ ++++|+|.+.
T Consensus 170 l~~~~~~~i~aIR~~g~~np~~~Iiv~g~~~-~~~--------~~~~~-----~~~~P~~~~n~-v~s~H~Y~p~~f~~~ 234 (345)
T 3ndz_A 170 VNRYNLTAVNAIRATGGNNATRYIMVPTLAA-SAM--------STTIN-----DLVIPNNDSKV-IVSLHMYSPYFFAMD 234 (345)
T ss_dssp HHHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CCS--------HHHHH-----HCCCGGGCTTE-EEEEECCCSHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEECCCcc-Ccc--------cchhh-----cccCCCCCCcE-EEEEEecCchhcccC
Confidence 678999999999999 7889999975322 110 00111 01111112343 7899999741
Q ss_pred ------CCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcc
Q 014151 298 ------WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGA 371 (430)
Q Consensus 298 ------w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 371 (430)
|.. ....+.+...+........+ .|+||+|||||..... +.+.|.+|++.+++.+. + ..+
T Consensus 235 ~~g~~~w~~----~~~~~~~~~~~~~~~~~~~~-~g~pv~iGEfG~~~~~---~~~~~~~~~~~~~~~~~----~--~gi 300 (345)
T 3ndz_A 235 INGTSSWGS----DYDKSSLDSEFDAVYNKFVK-NGRAVVIGEMGSINKN---NTAARVTHAEYYAKSAK----A--RGL 300 (345)
T ss_dssp TTSCSCCCS----HHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHH----T--TTC
T ss_pred CCCCcCCCC----cccHHHHHHHHHHHHHHHHH-cCCcEEEEeecCCCCC---CHHHHHHHHHHHHHHHH----H--CCC
Confidence 211 01112233333333444454 7999999999998654 35677888777765432 2 368
Q ss_pred cceeeeeccCCCccCCCCceEEcCC
Q 014151 372 GALIWQLFVEGMEEYNDDFGIVPWE 396 (430)
Q Consensus 372 G~~~W~~~~~~~~~~~dg~~i~~~~ 396 (430)
|+++|+++... ..-.++|+|+-.+
T Consensus 301 ~~~~W~~g~~~-~~~~~~fG~~dr~ 324 (345)
T 3ndz_A 301 TPIWWDNGYSV-AGKAETFGIFNRS 324 (345)
T ss_dssp EEEEEECSCCC-TTSTTCCCCEETT
T ss_pred eEEEECCCCCC-CCCCcccceEECC
Confidence 99999998541 1124678877543
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=223.87 Aligned_cols=260 Identities=15% Similarity=0.125 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W 156 (430)
..+++|+.|+++|+|+||+.+ .|..+++. ++.++++.++++|++|++|.++||+|||++|+. +.|
T Consensus 62 ~~~~di~~i~~~G~n~vRipv----~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~----------~~w 127 (380)
T 1edg_A 62 TTKQMIDAIKQKGFNTVRIPV----SWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHD----------VDK 127 (380)
T ss_dssp CCHHHHHHHHHHTCCEEEECC----CCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSC----------BCT
T ss_pred ccHHHHHHHHHcCCCEEEecc----cHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCc----------hhh
Confidence 468899999999999999954 25555543 567899999999999999999999999999863 123
Q ss_pred hhhhCCCCCCCCCCCCCCHHHHHHH-HHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC--C------h----
Q 014151 157 AWEEGIGISSSNDSFFFDPSIHKYF-KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP--S------G---- 223 (430)
Q Consensus 157 ~~~~G~~~~~~~~~f~~d~~~~~~~-~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~--~------~---- 223 (430)
... ...+..++..++.+ .++|+.|++| ||++|.|++|+|+|||...... . +
T Consensus 128 ~~~--------~~~~~~~~~~~~~~~~~~w~~ia~~--------~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~ 191 (380)
T 1edg_A 128 VKG--------YFPSSQYMASSKKYITSVWAQIAAR--------FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVD 191 (380)
T ss_dssp TTS--------BCSSGGGHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHH
T ss_pred hcC--------CCCccccHHHHHHHHHHHHHHHHHH--------hCCCCCEEEEEecCCCCcCCCCcccccccCCCchHH
Confidence 210 00123457789999 9999999999 9999999999999999875310 0 0
Q ss_pred --HHHHHHHHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCC-C--CcceEEeeecC
Q 014151 224 --DTLQDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNN-D--NIDFASVHIYP 295 (430)
Q Consensus 224 --~~~~~w~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~-~--~iD~~s~H~Y~ 295 (430)
+.+.+|++++.++||+. +|+++|.++...+ +.. ...+ ..+...... + +-.++++|+|+
T Consensus 192 ~~~~l~~~~~~~~~~IR~~g~~np~~~Iiv~g~~~-~~~--------~~~~-----~~~~~p~d~~~~~~n~v~s~H~Y~ 257 (380)
T 1edg_A 192 SINCINQLNQDFVNTVRATGGKNASRYLMCPGYVA-SPD--------GATN-----DYFRMPNDISGNNNKIIVSVHAYC 257 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CHH--------HHHS-----TTCCCCCCCTTCCSCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEECCCcC-Ccc--------cccc-----ccccCCCCCccccCcEEEEEeecC
Confidence 45688999999999999 5999988864221 100 0000 011101110 1 13389999997
Q ss_pred CC--------------CCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHH
Q 014151 296 DH--------------WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVY 361 (430)
Q Consensus 296 ~~--------------w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~ 361 (430)
+. |... .+...+.+...+......+.+ .++||+|||||..... +.+.|.+|++.+++.+.
T Consensus 258 ~~~f~~~~~~~~g~~~w~~~--~~~~~~~i~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~ 331 (380)
T 1edg_A 258 PWNFAGLAMADGGTNAWNIN--DSKDQSEVTWFMDNIYNKYTS-RGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAK 331 (380)
T ss_dssp SHHHHTSCGGGTCCCCCCTT--CHHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHH
T ss_pred CcccccccccCCCCCccCCC--chhhHHHHHHHHHHHHHHHHH-cCCCEEEEeccCCCCC---ChHHHHHHHHHHHHHHH
Confidence 52 1100 011112222223333234444 7999999999998764 34567788887776554
Q ss_pred HHHhcCCCcccceeeeeccCCCccCCCCceEEcC
Q 014151 362 KSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPW 395 (430)
Q Consensus 362 ~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~ 395 (430)
+ . .+|+++|++++.. .-+++|++...
T Consensus 332 ~----~--gig~~~W~~g~~~--g~~e~~g~~~~ 357 (380)
T 1edg_A 332 A----R--GILCILWDNNNFS--GTGELFGFFDR 357 (380)
T ss_dssp H----T--TCEEEECCCCCCS--SSSCCCCCEET
T ss_pred H----C--CCceEEECCCCCC--CCCcceeEEEC
Confidence 3 2 5799999986531 11246777643
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-25 Score=230.37 Aligned_cols=258 Identities=16% Similarity=0.174 Sum_probs=165.5
Q ss_pred CCCCcEEEeCCeEEE-CCeEEEEEee--eccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCC
Q 014151 37 PEMGFVTRNGTHFML-DGKALYVNGW--NSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~-~G~~~~~~G~--N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
...++|+++|++|+. +|+| ++|+ |.+|.... .+++|+.|+++|+|+||+++.... ..+ +.++.
T Consensus 7 ~~~~~l~v~G~~ivd~~G~~--lrGv~~~~~w~~~~---------~~~d~~~i~~~G~N~VRipv~~~~--~~~-~~~~~ 72 (491)
T 2y8k_A 7 RGRPRLNAARTTFVGDNGQP--LRGPYTSTEWTAAA---------PYDQIARVKELGFNAVHLYAECFD--PRY-PAPGS 72 (491)
T ss_dssp CCCCEECTTSSSEECTTSCB--CEEEEEECSSSCCC---------CHHHHGGGGGGTCCEEEEEEEECC--TTT-TSTTC
T ss_pred CCCceEEeCCCEEECCCCCE--eecccccCCcCCCC---------CHHHHHHHHHcCCCEEEECceeec--ccc-cCCCc
Confidence 456789999999995 9999 7777 87776531 247899999999999999664211 011 22334
Q ss_pred CChH-HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcc
Q 014151 114 FDER-VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 114 ~de~-~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~ 192 (430)
.++. .+++||++|++|.++||+|||++|+. +. .+..+ .+.++++|+.|++|
T Consensus 73 ~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~-----~~-------------------~~~~~---~~~~~~~w~~iA~r- 124 (491)
T 2y8k_A 73 KAPGYAVNEIDKIVERTRELGLYLVITIGNG-----AN-------------------NGNHN---AQWARDFWKFYAPR- 124 (491)
T ss_dssp CCTTTTHHHHHHHHHHHHHHTCEEEEEEECT-----TC-------------------TTCCC---HHHHHHHHHHHHHH-
T ss_pred cChhHHHHHHHHHHHHHHHCCCEEEEECCCC-----CC-------------------Ccccc---HHHHHHHHHHHHHH-
Confidence 4543 59999999999999999999998751 10 01122 57789999999999
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCCCCh------HHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCc
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSDPSG------DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNP 266 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~------~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np 266 (430)
||++|+|+ |||+|||........ ..+.+++++++++||++||+++|++|....+.. .
T Consensus 125 -------yk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~~~~g---------~ 187 (491)
T 2y8k_A 125 -------YAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGG---------K 187 (491)
T ss_dssp -------HTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEEEESCCCH---------H
T ss_pred -------hCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEecccccCC---------C
Confidence 99999998 999999975221111 238899999999999999999999975321100 0
Q ss_pred cchhh---c-cC-cchhhc---cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCC
Q 014151 267 EMWAS---A-LG-SDFIRN---SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338 (430)
Q Consensus 267 ~~w~~---~-~g-~df~~~---~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~ 338 (430)
..|.. . .. .++... ...+++ ++++|.|+... ++++.++.+.+ .++||+|+|||..
T Consensus 188 ~~~~~~~~~l~~~~~~~~~~~~~~~~n~-v~s~H~Y~~~~---------------~~~~~l~~~~~-~g~Pv~igEfG~~ 250 (491)
T 2y8k_A 188 GGAAEALKDIRAFNKAVFGNENAVWTNE-AVAFHGYAGWQ---------------ETTIAVEELLK-AGYPCFMTEYAGG 250 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTCCCSSE-EEEEESTTCHH---------------HHHHHHHHHHH-TTCCEEEEECCCC
T ss_pred cccchhhcccccccccccccCCCCCCce-eEEEeeCCCCc---------------ccHHHHHHHHH-cCCCEEEEeeccc
Confidence 01110 0 00 001100 011232 68999998531 11233333443 7999999999976
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 339 NLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 339 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
....+...-. . .+++.+.+ ..+|+++|+|.++
T Consensus 251 ~~~~~~~~~~-~----~~~~~~~~------~~i~w~~W~~~~~ 282 (491)
T 2y8k_A 251 AWGSGMGGLD-V----ELTYELER------LGVSWLTFQYIPP 282 (491)
T ss_dssp --CCSCSSCC-H----HHHHHHHH------HTCEEEEEEECTT
T ss_pred ccCCCCcchh-H----HHHHHHHh------cCcceEEEeccCC
Confidence 6111100001 1 12222222 2589999999865
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=219.96 Aligned_cols=256 Identities=16% Similarity=0.252 Sum_probs=170.5
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCC-CCChH-HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG-QFDER-VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg-~~de~-~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 157 (430)
+++|+.|+++|+|+||+.+. |..+++.++ .|.+. .++.||++|++|+++||+|||++|.. .|+.+.+.
T Consensus 76 e~d~~~i~~~G~N~VRipi~----~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~---pG~qng~~--- 145 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIG----YWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGA---AGSQNGFD--- 145 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEEC---TTCSSCCG---
T ss_pred HHHHHHHHHCCCCEEEccCC----HHHcccCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCC---CCccCCcc---
Confidence 78999999999999999553 223444443 34444 89999999999999999999999862 23221111
Q ss_pred hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC---CceeEEeecCCCCCCCCCChHHHH-HHHHHH
Q 014151 158 WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND---PTIFAWELINEPRCMSDPSGDTLQ-DWIDEM 233 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~---p~I~~wel~NEp~~~~~~~~~~~~-~w~~~~ 233 (430)
..|. .....|.++..++.+.++|+.|++| |+++ |+|++|+|+|||.... .+.+.+. +|++++
T Consensus 146 -~sG~----~~~~~w~~~~~~~~~~~~w~~ia~r--------y~~~~y~~~Vi~~el~NEP~~~~-~~~~~~~~~~~~~~ 211 (408)
T 1h4p_A 146 -NSGL----RDSYKFLEDSNLAVTINVLNYILKK--------YSAEEYLDIVIGIELINEPLGPV-LDMDKMKNDYLAPA 211 (408)
T ss_dssp -GGSS----TTCCCTTSHHHHHHHHHHHHHHHHH--------TTSHHHHTTEEEEESCSCCCGGG-SCHHHHHHHTHHHH
T ss_pred -CCCC----CCCCCCCCHHHHHHHHHHHHHHHHH--------HcccCCCCeEEEEEeccCCCCCC-CCHHHHHHHHHHHH
Confidence 0121 1234577899999999999999999 9999 9999999999999743 2357888 999999
Q ss_pred HHHHHhc-CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc-CCCCcceEEeeecCCCCCCC---cchhhhH
Q 014151 234 SAFVKSI-DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS-NNDNIDFASVHIYPDHWFHD---LEFEDDL 308 (430)
Q Consensus 234 ~~~Ir~~-dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~-~~~~iD~~s~H~Y~~~w~~~---~~~~~~~ 308 (430)
+++||+. +|+++|+++ +|+.+ +..|.. +.... ..+++ ++++|.|.. +... .+.+..+
T Consensus 212 ~~~IR~~~~~~~~iii~-dg~~~----------~~~w~~-----~l~~~~~~~nv-v~s~H~Y~~-~~~~~~~~~~~~~i 273 (408)
T 1h4p_A 212 YEYLRNNIKSDQVIIIH-DAFQP----------YNYWDD-----FMTENDGYWGV-TIDHHHYQV-FASDQLERSIDEHI 273 (408)
T ss_dssp HHHHHHTTCCCCCEEEE-CTTCC----------TTGGGG-----SSCGGGTCCSE-EEEEEECSC-SSHHHHTCCHHHHH
T ss_pred HHHHHhhcCCCCceEee-ecccC----------chhhhh-----hccccCCCCCE-EEEeeeccC-CCCccccCCHHHHH
Confidence 9999998 998877775 34421 113432 21111 13455 579999985 3221 1112222
Q ss_pred HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------------------------------------CCChhHHHH
Q 014151 309 KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------------------------------------GFEPSLRDK 351 (430)
Q Consensus 309 ~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------------------------------------~~~~~~r~~ 351 (430)
.....|... ..+ .++|++|||||.....+ .++ +.+.+
T Consensus 274 ~~~~~~~~~----~~~-~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~c~~~~~~~~~~-~~~k~ 347 (408)
T 1h4p_A 274 KVACEWGTG----VLN-ESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWS-DERKE 347 (408)
T ss_dssp HHHHHHHHH----HTT-CSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCC-HHHHH
T ss_pred HHHHHHHHH----Hhh-cCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCcccCCCChhhcc-HHHHH
Confidence 222223221 222 68999999999875421 011 23556
Q ss_pred HHHHHHHHHHHHHhcCCCcccceeeeeccCCCccC
Q 014151 352 LYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~ 386 (430)
.++...++-+++... ..||+||+|+....++|
T Consensus 348 ~~~~~~~aq~~~~~~---~~Gw~fWt~K~e~~~~W 379 (408)
T 1h4p_A 348 NTRRYVEAQLDAFEM---RGGWIIWCYKTESSLEW 379 (408)
T ss_dssp HHHHHHHHHHHHHTT---TTEEEESCSCCSSCSTT
T ss_pred HHHHHHHHHHHHHhh---cCCeEEEeEecCCCCCC
Confidence 666666655555432 34999999998765566
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-24 Score=214.42 Aligned_cols=256 Identities=19% Similarity=0.252 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCcccc--CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
..+++|+.|+++|+|+||+.+ .|..+.+ .++.++++.++.+|++|++|.++||+|||++|+. .
T Consensus 63 ~~~~di~~i~~~G~N~vRipi----~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~~-~---------- 127 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPT----TWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHHE-T---------- 127 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECC----CCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC-S----------
T ss_pred CcHHHHHHHHHcCCCEEEEee----EChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc-c----------
Confidence 467899999999999999954 2554444 3567899999999999999999999999999863 0
Q ss_pred hhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC------Ch---HHH
Q 014151 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP------SG---DTL 226 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~------~~---~~~ 226 (430)
|....+ . ..++.++.+.++|+.|++| ||++|.+++|+|.|||...... .. +.+
T Consensus 128 ~~~~~~----~------~~~~~~~~~~~~w~~ia~~--------~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l 189 (376)
T 3ayr_A 128 WNHAFS----E------TLDTAKEILEKIWSQIAEE--------FKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAV 189 (376)
T ss_dssp SCCSCT----T------THHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHH
T ss_pred cccccc----c------chHHHHHHHHHHHHHHHHH--------HcCCCceeeEEeecCCCcCCCccccCCccHHHHHHH
Confidence 110000 0 1256889999999999999 9999999999999999975310 11 346
Q ss_pred HHHHHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCC----
Q 014151 227 QDWIDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF---- 299 (430)
Q Consensus 227 ~~w~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~---- 299 (430)
.+|++++.++||+. +|+++|.++. +.... ++..+. .+...... .-.++++|+|++...
T Consensus 190 ~~~~~~~~~aIR~~g~~np~~~Iiv~g--~~~~~-------~~~~~~-----~~~~p~~~-~n~v~s~H~Y~~~~~~~~~ 254 (376)
T 3ayr_A 190 NAMNAVFLKTVRSAGGNNPKRHLMIPP--YAAAC-------NENSFN-----NFIFPEDD-DKVIASVHAYAPYNFALNN 254 (376)
T ss_dssp HHHHHHHHHHHHTSSTTGGGCCEEECC--GGGBC-------SHHHHH-----TCCCCTTC-TTEEEEEECCCSHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEECC--CccCc-------cccccc-----cccCCCCC-CCEEEEEeecCchhccccC
Confidence 77899999999998 4557888863 21100 010111 11111111 233889999986211
Q ss_pred ---CCcchhh----hHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 300 ---HDLEFED----DLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 300 ---~~~~~~~----~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
..+..+. .+.....++. ....+ .++||+|||||..... +.+.|..|++.+++.+ ++ ..+|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~g~Pv~igEfG~~~~~---~~~~~~~w~~~~~~~~----~~--~~ig 321 (376)
T 3ayr_A 255 GEGAVDKFDAAGKRDLEWNINLMK---KRFVD-QGIPMILGEYGAMNRD---NEEDRATWAEFYMEKV----TA--MGVP 321 (376)
T ss_dssp STTCCSSCCHHHHHHHHHHHHHHH---HHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHH----HT--TTCC
T ss_pred CCCcccccChhhhhHHHHHHHHHH---HHHHH-cCCcEEEEccccCCCC---CcHHHHHHHHHHHHHH----HH--CCCc
Confidence 0011111 0111111121 22333 7899999999998764 3466777877665533 22 2579
Q ss_pred ceeeeeccCCCccCCCCceEEcCC
Q 014151 373 ALIWQLFVEGMEEYNDDFGIVPWE 396 (430)
Q Consensus 373 ~~~W~~~~~~~~~~~dg~~i~~~~ 396 (430)
+++|++++. ...+++|+|+..+
T Consensus 322 ~~~W~~g~~--~g~~~~~g~~d~~ 343 (376)
T 3ayr_A 322 QIWWDNGVF--EGTGERFGLLDRK 343 (376)
T ss_dssp EEEEECSCC--SSSSCCCCCEETT
T ss_pred EEEECCCCC--CCCCccceeEeCC
Confidence 999998653 1123568877544
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-24 Score=230.27 Aligned_cols=252 Identities=15% Similarity=0.190 Sum_probs=180.3
Q ss_pred CCCc--EEEe-CCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 38 EMGF--VTRN-GTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 38 ~~gf--v~~~-g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
+.|| |+++ +..|++||+|++++|+|.|..........+.+.++++|+.||++|+|+||++.. + .
T Consensus 276 ~~GfR~ie~~~~~~f~lNG~~i~l~G~n~h~~~~~~G~~~~~e~~~~dl~l~k~~G~N~iR~~h~-----p----~---- 342 (692)
T 3fn9_A 276 PLGVRKYEIVAGKGFFLNGEKYSMYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRFAHY-----Q----Q---- 342 (692)
T ss_dssp EECCCCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEETTS-----C----C----
T ss_pred EecceEEEEECCCceEECCeeeeeeccccCCCcccccccccHHHHHHHHHHHHHCCCCEEEecCC-----C----C----
Confidence 4567 6666 568999999999999998754332223457899999999999999999999542 1 1
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
+ ++++++|+++||+|+..+...+ . +.+|. .+.+++.++.++.|
T Consensus 343 ~-------~~~~dlcDe~Gi~V~~E~~~~~-----~---------------------~~~~~-~~~~~~~~~~~v~r--- 385 (692)
T 3fn9_A 343 S-------DYLYSRCDTLGLIIWAEIPCVN-----R---------------------VTGYE-TENAQSQLRELIRQ--- 385 (692)
T ss_dssp C-------HHHHHHHHHHTCEEEEECCCBS-----C---------------------CCSSC-HHHHHHHHHHHHHH---
T ss_pred c-------HHHHHHHHHCCCEEEEcccccC-----C---------------------CCCHH-HHHHHHHHHHHHHH---
Confidence 1 4789999999999987763210 0 23445 77788999999999
Q ss_pred cccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG 274 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g 274 (430)
++|||+|++|+++||+... .+...+++++|.+.+|++||+|+|+.++... ....
T Consensus 386 -----~rNHPSIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~-~~~~---------------- 439 (692)
T 3fn9_A 386 -----SFNHPSIYVWGLHNEVYQP----HEYTAALTRSLHDLAKTEDPDRYTVSVNGYG-HMDH---------------- 439 (692)
T ss_dssp -----HTTCTTEEEEEEEESCCSS----HHHHHHHHHHHHHHHHHHCTTSEEEEEESSS-CTTC----------------
T ss_pred -----hcCCCcceEEEeccccCcc----cccHHHHHHHHHHHHHHHCCCCCEEEeCCCc-cccc----------------
Confidence 9999999999999999863 3556789999999999999999999875211 0000
Q ss_pred cchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC-------------
Q 014151 275 SDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI------------- 341 (430)
Q Consensus 275 ~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~------------- 341 (430)
......|++++|.|+. |.... ... ...|+... .++..+||++++|||.....
T Consensus 440 ------~~~~~~Dv~~~n~Y~g-WY~~~-~~~----~~~~~~~~---~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~ 504 (692)
T 3fn9_A 440 ------PVNLNADIQGMNRYFG-WYEKK-IQD----IKPWVEQL---EKDYPYQKLMLTEYGADANLAHQTEYLGDALNW 504 (692)
T ss_dssp ------TTCSSSSEEEEECCBT-TTBSC-GGG----HHHHHHHH---HHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCS
T ss_pred ------cccccCCccccccccc-ccCCc-hHH----HHHHHHHH---HHHhcCccEEEEEEcCCcccccccccccccccc
Confidence 0124689999999987 54321 111 12233221 11226899999999985221
Q ss_pred CC--CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCc
Q 014151 342 KG--FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGME 384 (430)
Q Consensus 342 ~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~ 384 (430)
.+ .+++.+..+++..++.+.+ .+.+.|.++|++.|.+.+
T Consensus 505 ~~~~~see~Q~~~~~~~~~~~~~----~p~~~G~fvW~~~D~~~~ 545 (692)
T 3fn9_A 505 GKPFYPETFQTKTHEYQWSIIKD----HPYIIASYLWNMFDFAVP 545 (692)
T ss_dssp SSSCCBHHHHHHHHHHHHHHHHH----CTTSCEEEESCSBCEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHhc----CCCeEEEEEEEeeecCCC
Confidence 01 4667777777777665543 457999999999997653
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-24 Score=229.77 Aligned_cols=257 Identities=18% Similarity=0.244 Sum_probs=180.3
Q ss_pred CCCCc--EEEe-CCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCC
Q 014151 37 PEMGF--VTRN-GTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 37 ~~~gf--v~~~-g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
.+.|| |+++ ++.|.+||+|++++|+|.+..........+.+.++++|+.||++|+|+||++.. + .
T Consensus 261 ~~~G~R~i~~~~~~~f~lNGk~~~l~G~n~h~~~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~h~-----p----~--- 328 (667)
T 3cmg_A 261 QPLGLRYYHTDPDKGFFLNGKHLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLAHY-----P----Q--- 328 (667)
T ss_dssp EEECCCCEEEETTTEEEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEETTS-----C----C---
T ss_pred EeeeeEEEEEeCCCcEEECCEEEEEEEEEcCcCccccccCCCHHHHHHHHHHHHHCCCCEEEecCC-----C----C---
Confidence 35577 5666 678999999999999998654322113457899999999999999999999632 1 1
Q ss_pred CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
+ ++++++|+++||+|+..+.. +. .+| |. ...+..+|..++.+++.++.+++|
T Consensus 329 -~-------~~~~~~cD~~Gl~V~~e~~~-~~-~~~------~~----------~~~~~~~~~~~~~~~~~~~~~v~r-- 380 (667)
T 3cmg_A 329 -A-------TYMYDLMDKHGIVTWAEIPF-VG-PGG------YA----------DKGFVDQASFRENGKQQLIELIRQ-- 380 (667)
T ss_dssp -C-------HHHHHHHHHHTCEEEEECCC-BC-CTT------SS----------SCSCCCSHHHHHHHHHHHHHHHHH--
T ss_pred -C-------HHHHHHHHHCCCEEEEcccc-cC-cCc------cc----------cccccCCHHHHHHHHHHHHHHHHH--
Confidence 1 46799999999999988743 11 111 10 122456789999999999999999
Q ss_pred CcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhcc
Q 014151 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASAL 273 (430)
Q Consensus 194 ~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~ 273 (430)
+++||+|++|+++||+.... +....++++|.+.||++||+|+|+.++. . . .
T Consensus 381 ------~rNHPSIi~W~~gNE~~~~~----~~~~~~~~~l~~~vk~~DptRpvt~~~~-~-~---------~-------- 431 (667)
T 3cmg_A 381 ------HYNHPSICFWGLFNELKEVG----DNPVEYVKELNALAKQEDPTRPTTSASN-Q-D---------G-------- 431 (667)
T ss_dssp ------HTTCTTEEEEEEEESCCSSS----SCCHHHHHHHHHHHHHHCTTSCEEEEEC-C-C---------S--------
T ss_pred ------cCCCCEEEEEecccCCCccc----hhHHHHHHHHHHHHHHHCCCCcEEEeCC-C-C---------C--------
Confidence 99999999999999997532 2245788999999999999999998752 1 0 0
Q ss_pred CcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC------------
Q 014151 274 GSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI------------ 341 (430)
Q Consensus 274 g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~------------ 341 (430)
.. .+..|++++|.|+. |.... . .....++.... ++..+||++++|||.....
T Consensus 432 --~~-----~~~~Dv~~~n~Y~~-wy~~~-~----~~~~~~~~~~~---~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~ 495 (667)
T 3cmg_A 432 --NL-----NFITENIAWNRYDG-WYGST-P----KTLATFLDRTH---KKHPELRIGISEYGAGASIYHQQDSLKQPSA 495 (667)
T ss_dssp --GG-----GGSSSSEEEECCTT-TSSSC-T----HHHHHHHHHHH---HHCTTCCEEEEEECCCCBTTCCCSSCCCCCT
T ss_pred --cc-----ccccCEEEeccccc-cccCc-h----hhhHHHHHHHH---HHCCCCcEEEEEECCCCCccccccccccccc
Confidence 00 23579999999998 53321 1 11223333221 1236899999999985431
Q ss_pred C--CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCC
Q 014151 342 K--GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 342 ~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
. ..+++.+..+++..++.+ ++.+.+.|.++|++.|..
T Consensus 496 ~~~~~~e~~q~~~~~~~~~~~----~~~~~~~G~fvW~~~D~~ 534 (667)
T 3cmg_A 496 SGWWHPENWQTYYHMENWKII----AERPFVWGTFVWNMFDFG 534 (667)
T ss_dssp TSSCCBHHHHHHHHHHHHHHH----HTCTTCCCEEESCSBCEE
T ss_pred ccccCcHHHHHHHHHHHHHHH----hcCCCcEEEEEeeeeccC
Confidence 0 123456666666655443 334568999999999764
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-24 Score=212.87 Aligned_cols=257 Identities=15% Similarity=0.207 Sum_probs=169.7
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCC-CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG-QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAW 158 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg-~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~ 158 (430)
+++|+.||++|+|+||+.+. |..+++.++ .|....++.||++|++|.++||+|||++|.. .|+...+ +
T Consensus 76 e~D~~~ik~~G~N~VRipi~----~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~---pG~qng~--~-- 144 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIG----YWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGA---PGSQNGF--D-- 144 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEEC---TTCSSCC--G--
T ss_pred HHHHHHHHHcCCCEEEEccc----HHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCC---Ccccccc--c--
Confidence 78999999999999999553 333444443 3544579999999999999999999999852 3332111 1
Q ss_pred hhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC---CceeEEeecCCCCCCCCCChHHHHHHHHHHHH
Q 014151 159 EEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND---PTIFAWELINEPRCMSDPSGDTLQDWIDEMSA 235 (430)
Q Consensus 159 ~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~---p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~ 235 (430)
..|. .....|.++..++.+.++|+.|++| |+++ |+|++|+|.|||.... .+.+.+..|++++.+
T Consensus 145 ~sG~----~~~~~w~~~~~~~~~~~~w~~iA~r--------y~~~~y~~~V~~~el~NEP~~~~-~~~~~~~~~~~~a~~ 211 (399)
T 3n9k_A 145 NSGL----RDSYNFQNGDNTQVTLNVLNTIFKK--------YGGNEYSDVVIGIELLNEPLGPV-LNMDKLKQFFLDGYN 211 (399)
T ss_dssp GGSS----TTCCCTTSTTHHHHHHHHHHHHHHH--------HSSGGGTTTEEEEESCSCCCGGG-SCHHHHHHHHHHHHH
T ss_pred CCCC----CCCCCCCCHHHHHHHHHHHHHHHHH--------hhcccCCCceEEEEeccCCCCCC-CCHHHHHHHHHHHHH
Confidence 1121 1123456666899999999999999 9999 9999999999999742 135789999999999
Q ss_pred HHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc-cCCCCcceEEeeecCCCCCCC---cchhhhHHHH
Q 014151 236 FVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN-SNNDNIDFASVHIYPDHWFHD---LEFEDDLKFV 311 (430)
Q Consensus 236 ~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~-~~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~~ 311 (430)
+||+++|+++|+++ +++... ..|.. |... ...+++ ++++|.|... .+. .+....+...
T Consensus 212 ~IR~~~p~~~Iii~-dg~~~~----------~~W~~-----~l~~~~~~~nv-v~d~H~Y~~f-~~~~~~~~~~~~i~~~ 273 (399)
T 3n9k_A 212 SLRQTGSVTPVIIH-DAAQVF----------GYWNN-----FLTVAEGQWNV-VVDHHHYQVF-SGGELSRNINDHISVA 273 (399)
T ss_dssp HHHHTTCCCCEEEE-CTTCCT----------TTTTT-----SSCGGGTCCSE-EEEEECCSCS-SHHHHTSCHHHHHHHH
T ss_pred HHHhcCCCCeEEEe-CCCCCh----------HHHHh-----hcccccCCCCE-EEEeccccCC-CcccccCCHHHHHHHH
Confidence 99999999999997 354221 13432 2211 123455 6899999853 210 1111111111
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEecCCCCCCC------------------------C---------CChhHHHHHHHHHHH
Q 014151 312 TKWMLSHIEDGDKELNKPVFFTEYGLSNLIK------------------------G---------FEPSLRDKLYKTILD 358 (430)
Q Consensus 312 ~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~------------------------~---------~~~~~r~~~~~~~~~ 358 (430)
-.+ .....+ .+.|++||||......+ . ++ +.+.++++...+
T Consensus 274 c~~----~~~~~~-~~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~-~~~k~~~~~f~~ 347 (399)
T 3n9k_A 274 CNW----GWDAKK-ESHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWS-DEHKTDTRRYIE 347 (399)
T ss_dssp HHH----HHHHHT-CSSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCC-HHHHHHHHHHHH
T ss_pred HHH----HHHHhc-CCCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCcCcCcccccc-HHHHHHHHHHHH
Confidence 111 111222 56899999998865321 0 11 345666776665
Q ss_pred HHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
+-+++... ..||+||+|+....++|+
T Consensus 348 aQ~~~~e~---~~Gw~fWtwK~e~~~~W~ 373 (399)
T 3n9k_A 348 AQLDAFEY---TGGWVFWSWKTENAPEWS 373 (399)
T ss_dssp HHHHHHHT---TTEEEESCSCCSSCGGGC
T ss_pred HHHHHHHc---CCcEEEeeeecCCCCCCC
Confidence 54444333 459999999987656673
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-24 Score=220.81 Aligned_cols=272 Identities=15% Similarity=0.205 Sum_probs=170.7
Q ss_pred CCcEEEeCCeEEE--CCeEEEEEeeeccc-----cccccC--------CC-CCHHHHHHHHHHHHHcCCCEEEEccccCC
Q 014151 39 MGFVTRNGTHFML--DGKALYVNGWNSYW-----LMDHAV--------HD-YSRARVGAMLQAGAKMGLTVCRTWAFNDG 102 (430)
Q Consensus 39 ~gfv~~~g~~f~~--~G~~~~~~G~N~~~-----~~~~~~--------~~-~~~~~~~~~~~~~~~~G~n~vR~~~~~~g 102 (430)
...|+++|++|++ ||++|+++|+|++. .+..+. ++ .+++.+++|++.||++|+|+||+|..
T Consensus 33 ~r~I~VkG~~f~~~~NG~~f~lkGVny~p~~~~~~~~~G~~~~~~~~~d~l~~~e~~~rDi~LmK~~GiN~VRvy~~--- 109 (555)
T 2w61_A 33 TPAIKIVGNKFFDSESGEQFFIKGIAYQLQRSEEELSNANGAFETSYIDALADPKICLRDIPFLKMLGVNTLRVYAI--- 109 (555)
T ss_dssp SCCEEEETTEEEETTTCCBCCEEEEECCCCCC------CTTTTCCSSCCGGGCHHHHHHHHHHHHHHTCSEEEECCC---
T ss_pred CceEEEECCEEEECCCCeEEEEEEEECCCcccccccccCCccccccccccCCCHHHHHHHHHHHHHcCCCEEEEecc---
Confidence 3559999999999 99999999999775 211110 11 26889999999999999999999742
Q ss_pred CCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHH
Q 014151 103 GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFK 182 (430)
Q Consensus 103 ~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~ 182 (430)
.|+.+. |+++++|+++||+||+.++..- ... ...+|..++.+.
T Consensus 110 -----~P~~~~---------d~~ldl~~~~GIyVIle~~~p~---~~i--------------------~~~~P~~~~~~~ 152 (555)
T 2w61_A 110 -----DPTKSH---------DICMEALSAEGMYVLLDLSEPD---ISI--------------------NRENPSWDVHIF 152 (555)
T ss_dssp -----CTTSCC---------HHHHHHHHHTTCEEEEESCBTT---BSC--------------------CTTSCCCCHHHH
T ss_pred -----CCCCCh---------HHHHHHHHhcCCEEEEeCCCCC---ccc--------------------ccCCHHHHHHHH
Confidence 222211 6889999999999999975420 000 012455566778
Q ss_pred HHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC--ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCC
Q 014151 183 HYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP--SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK 260 (430)
Q Consensus 183 ~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~--~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~ 260 (430)
++++.+++| |++||+|++|.++||+...... ...-+.+-++++.++||+.|+++ |.+|.+.. +..
T Consensus 153 ~r~~~~V~r--------y~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~-IpVgy~~a---d~~- 219 (555)
T 2w61_A 153 ERYKSVIDA--------MSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRK-IPVGYSTN---DDA- 219 (555)
T ss_dssp HHHHHHHHH--------HTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCC-CCEEEEEC---CCT-
T ss_pred HHHHHHHHH--------cCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCc-ceeecccc---ccc-
Confidence 899999999 9999999999999999874321 11334556778889999988754 33443321 100
Q ss_pred CcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC
Q 014151 261 RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL 340 (430)
Q Consensus 261 ~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~ 340 (430)
.+... -.+|..- ..+.+|++++|.|+ |.....+.. ..+....+.... .+|||+++|||....
T Consensus 220 -------~~r~~-la~yl~c-~~~~~D~~~~N~Y~--w~g~s~f~~------sg~~~~~~~~~~-~~~Pi~vsEyG~~~~ 281 (555)
T 2w61_A 220 -------MTRDN-LARYFVC-GDVKADFYGINMYE--WCGYSTYGT------SGYRERTKEFEG-YPIPVFFSEFGCNLV 281 (555)
T ss_dssp -------TTHHH-HHHHTTB-TTCCCSCEEEEECC--CCSSCCHHH------HSHHHHHHHHTT-CSSCEEEEEECCCSS
T ss_pred -------hhhHH-HHHHhcc-CCCCcCEEEEeCCc--ccccccccc------hhHHHHHHHhhC-CCCCEEEEeCCCccC
Confidence 00000 0011110 03679999999998 543222211 111112222333 789999999999886
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCC
Q 014151 341 IKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396 (430)
Q Consensus 341 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~ 396 (430)
.++...+..+.|.+. .. ....|.++|.|.+. + ..|+++..+
T Consensus 282 ~pg~~~E~~a~y~~~--------m~--~~~sGG~Ife~~dE---~--nnyGLv~~d 322 (555)
T 2w61_A 282 RPRPFTEVSALYGNK--------MS--SVWSGGLAYMYFEE---E--NEYGVVKIN 322 (555)
T ss_dssp SSCCCTHHHHHTSHH--------HH--TTCCEEEESCSBCC---T--TCCCSEEEC
T ss_pred CCCchHHHHHHHhhc--------cc--ccccceEEEEEecc---c--CCccceeec
Confidence 443223333222221 11 13678899999985 2 236655443
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=211.76 Aligned_cols=248 Identities=15% Similarity=0.167 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc--CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
+.-.++.++.|+++|+|+||+.+ .|..+++ .++.++++.++.||++|++|.++||+|||++|+. ..+.|
T Consensus 42 ~~~t~~m~~~i~~~G~N~vRipi----~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~-~~~~g---- 112 (340)
T 3qr3_A 42 PDGIGQMQHFVNEDGMTIFRLPV----GWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNY-ARWNG---- 112 (340)
T ss_dssp CCHHHHHHHHHHHHCCCEEEEEE----CHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECST-TEETT----
T ss_pred CccHHHHHHHHHHCCCCEEEEEe----eHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCC-cccCC----
Confidence 34567778889999999999954 2555665 3678999999999999999999999999999973 21111
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHH
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEM 233 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~ 233 (430)
+. . -+++...+.+.++|+.|++| ||++|.|+ |||+|||... +...+.++++++
T Consensus 113 --~~------~-------~~~~~~~~~~~~~w~~iA~r--------yk~~~~Vi-~el~NEP~~~---~~~~w~~~~~~~ 165 (340)
T 3qr3_A 113 --GI------I-------GQGGPTNAQFTSLWSQLASK--------YASQSRVW-FGIMNEPHDV---NINTWAATVQEV 165 (340)
T ss_dssp --EE------T-------TTTSSCHHHHHHHHHHHHHH--------HTTCTTEE-EECCSCCCSS---CHHHHHHHHHHH
T ss_pred --cc------c-------CCCHHHHHHHHHHHHHHHHH--------hCCCCcEE-EEecCCCCCC---CHHHHHHHHHHH
Confidence 10 0 01233578899999999999 99999996 9999999975 357888999999
Q ss_pred HHHHHhcCCC-CEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCC-----CCcceEEeeecCCCCCCCcchhhh
Q 014151 234 SAFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNN-----DNIDFASVHIYPDHWFHDLEFEDD 307 (430)
Q Consensus 234 ~~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~-----~~iD~~s~H~Y~~~w~~~~~~~~~ 307 (430)
.++||+.+|+ ++|.++..++-+.. .|......+....+.. +++ ++++|+|.+.-......++.
T Consensus 166 i~aIR~~~~~~~~Iiv~g~~w~~~~----------~w~~~~~~~~l~~l~dP~~~~~nl-vys~H~Y~~~~~sgt~~~~~ 234 (340)
T 3qr3_A 166 VTAIRNAGATSQFISLPGNDWQSAG----------AFISDGSAAALSQVTNPDGSTTNL-IFDVHKYLDSDNSGTHAECT 234 (340)
T ss_dssp HHHHHHTTCCSSCEEEECSGGGBTT----------TTTTTSHHHHHTTCCCTTSCCTTE-EEEEECCCSTTSSSCSSSCC
T ss_pred HHHHHhhCCCccEEEEeCCcccccc----------cccccccchhhcccCCCCCCCCCE-EEEEEeCCCCCCCCCCcccc
Confidence 9999999999 79999864432110 1100000000011122 234 78999998532211000000
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
.......++...+.+++ .++|++|||||.... ....++++.+++.+.++ +....|+.+|.-++
T Consensus 235 ~~~i~~~~~~~~~~~~~-~g~pv~iGEfG~~~~------~~~~~~~~~~l~~~~~~---~~~~~gw~~W~~G~ 297 (340)
T 3qr3_A 235 TNNIDGAFSPLATWLRQ-NNRQAILTETGGGNV------QSCIQDMCQQIQYLNQN---SDVYLGYVGWGAGS 297 (340)
T ss_dssp CCSTTTTHHHHHHHHHH-TTCCEEEEEECCCSS------HHHHHHHHHHHHHHHTT---TTTEEEEEEEEEET
T ss_pred hhhHHHHHHHHHHHHHH-cCCcEEEeCccCCCC------hHHHHHHHHHHHHHHHc---CCcceEEEEecCCC
Confidence 00000123333334444 899999999998543 23456666666544321 23457788887764
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-23 Score=209.09 Aligned_cols=306 Identities=12% Similarity=0.175 Sum_probs=201.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+ +. +|+.++|. +|.+|+++++.+|++|+.+.++||+++++|++ |+ .
T Consensus 57 ~Y~~~~eDi~lm~~~G~~~~R~---si-~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h-~d-------~ 124 (453)
T 3ahx_A 57 HYHRYKEDVQLLKSLGIKSYRF---SI-AWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYH-WD-------L 124 (453)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHHHHHHHHHHHHHhCCCeEec---cc-CHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC-------c
Confidence 3678999999999999999999 33 59999998 89999999999999999999999999999985 43 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CC
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DP 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~ 221 (430)
|.|....|+ |.+++..+.|.+|++.+++| |++. |..|.+.|||.+.. ..
T Consensus 125 P~~l~~~gg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~ 185 (453)
T 3ahx_A 125 PQKLQDIGG---------WANPQVADYYVDYANLLFRE--------FGDR--VKTWITHNEPWVASYLGYALGVHAPGIK 185 (453)
T ss_dssp BHHHHTTTG---------GGSHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCC
T ss_pred cHhHhhCCC---------CCCchHHHHHHHHHHHHHHH--------hCCc--cceEEEccCcchhhccccccCcCCCCcc
Confidence 567654332 67899999999999999999 9986 89999999998521 01
Q ss_pred Ch-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc---
Q 014151 222 SG-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS--- 275 (430)
Q Consensus 222 ~~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~--- 275 (430)
+. ..++. -.....+++|+.+|+..|.+-....+. .|.. .+|. .|.. ..|.
T Consensus 186 ~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~ 261 (453)
T 3ahx_A 186 DMKMALLAAHNILLSHFKAVKAYRELEQDGQIGITLNLSTC--YSNS--ADEEDIAAAHRSDGWNNRWFLDAALKGTYPE 261 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEECCCE--EESS--SSHHHHHHHHHHHHHHTHHHHHHHHHSSCCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcee--ecCC--CCHHHHHHHHHHHHHHhHHHhHHhhCCCCCH
Confidence 11 11111 123566778999998765443321111 1100 0111 0100 0010
Q ss_pred -------------chh---hccCCCCcceEEeeecCCCCCC---Cc---------c-hhhhHHH--HHHHHHHHHHhhhh
Q 014151 276 -------------DFI---RNSNNDNIDFASVHIYPDHWFH---DL---------E-FEDDLKF--VTKWMLSHIEDGDK 324 (430)
Q Consensus 276 -------------df~---~~~~~~~iD~~s~H~Y~~~w~~---~~---------~-~~~~~~~--~~~~l~~~~~~a~~ 324 (430)
.|. ...-...+||+++++|...... .. . ......| ...-|+..+....+
T Consensus 262 ~~~~~~~~~~~~p~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~ 341 (453)
T 3ahx_A 262 DMIKIFSDTNIMPELPKELFTEVFETSDFLGINYYTRQVVKNNSEAFIGAESVAMDNPKTEMGWEIYPQGLYDLLTRIHR 341 (453)
T ss_dssp HHHHHHHHTTCCCCCCTTTTTTTCCCCSEEEEECCCCEEEEECTTSGGGEEECCCSSCBCTTCCBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCHHHHHHhhcCCCEEEeccccceEEecCCCCCCCccccCCCCCcCCCCCccChHHHHHHHHHHHH
Confidence 010 0011234899999999653110 00 0 0000000 11112333333322
Q ss_pred cCC-CcEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEc
Q 014151 325 ELN-KPVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVP 394 (430)
Q Consensus 325 ~~g-kPv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~ 394 (430)
.++ +||+|+|.|+.... ....+..|.+|++..+..+.++++++..+.|++.|++.|+ .+|..||+ +++
T Consensus 342 rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn--~eW~~gy~~RfGl~~ 419 (453)
T 3ahx_A 342 DYGNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSAIEAGVPLKGYYIWSFMDN--FEWAEGYEKRFGIVH 419 (453)
T ss_dssp HHTTCEEEEEEECCCCCCCCCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGCCCCSEE
T ss_pred HcCCCCEEEEecCCCCCCccccCCCcCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCCccc--cccccCccCcCCeEE
Confidence 254 89999999998643 1234689999999999999999999999999999999998 67876664 444
Q ss_pred CCCccHHHHHHHHHHHHhhcccc
Q 014151 395 WERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
.|-.+..+..|+++..++.+-..
T Consensus 420 VD~~t~~R~pK~S~~wy~~vi~~ 442 (453)
T 3ahx_A 420 VNYKTQERTIKKSAYWYKELIER 442 (453)
T ss_dssp ECTTTCCEEEBHHHHHHHHHHHH
T ss_pred EeCCCCCceecHHHHHHHHHHHh
Confidence 33222336677777777766433
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=214.04 Aligned_cols=304 Identities=14% Similarity=0.220 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+-+ .|+.++|. +|.+|+++++.+|++|+.|.++||++|++|++ |+ .|
T Consensus 80 Y~~~~eDi~lm~~~G~~~~R~si----~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d-------~P 147 (468)
T 2j78_A 80 YNRWKEDIEIIEKLGVKAYRFSI----SWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYH-WD-------LP 147 (468)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC----CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred cccCHHHHHHHHHcCCCEEEecc----CHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccC-CC-------Cc
Confidence 56889999999999999999932 59999998 89999999999999999999999999999985 43 25
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....| -|.+++..+.|.+|++.+++| |++ .|..|.++|||.+.. ..+
T Consensus 148 ~~l~~~g---------gw~~~~~~~~F~~ya~~~~~~--------~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 208 (468)
T 2j78_A 148 FALQLKG---------GWANREIADWFAEYSRVLFEN--------FGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRD 208 (468)
T ss_dssp HHHHTTT---------GGGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred hhhhhcC---------CCCChHHHHHHHHHHHHHHHH--------hCC--ccceEEEccccchhhccccccccCCCCccc
Confidence 6765433 267888999999999999999 998 788899999997521 011
Q ss_pred -hHHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc--------------chhh---ccCc---
Q 014151 223 -GDTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE--------------MWAS---ALGS--- 275 (430)
Q Consensus 223 -~~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~--------------~w~~---~~g~--- 275 (430)
...++. -.....+++|+.+|+..|.+-....+.. |.. .+|. .|.. ..|.
T Consensus 209 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~--P~~--~~~~D~~aa~~~~~~~~~~~f~dp~~~G~YP~ 284 (468)
T 2j78_A 209 IYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFE--PAS--EKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPE 284 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEEEEE--ESS--SCHHHHHHHHHHHHHHSTHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCCeee--cCC--CCHHHHHHHHHHHHHhhhceeehheeccccCh
Confidence 111111 1245566788999986654432211100 100 0111 0100 0010
Q ss_pred -----------chh----hccCCCCcceEEeeecCCCCC---CCc---------c-hhhhHHH--HHHHHHHHHHhhhhc
Q 014151 276 -----------DFI----RNSNNDNIDFASVHIYPDHWF---HDL---------E-FEDDLKF--VTKWMLSHIEDGDKE 325 (430)
Q Consensus 276 -----------df~----~~~~~~~iD~~s~H~Y~~~w~---~~~---------~-~~~~~~~--~~~~l~~~~~~a~~~ 325 (430)
.|. ..+. ..+||+++++|..... ... . ......| ...-|+..+....+.
T Consensus 285 ~~~~~~~~~~p~~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~r 363 (468)
T 2j78_A 285 LVLEFAREYLPENYKDDMSEIQ-EKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEE 363 (468)
T ss_dssp HHHHHHGGGSCTTGGGGHHHHT-CCCSEEEEEEEEEEEEEECTTC-CCEEEECCSSCBCTTCCBCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCHHHHHHhc-CCCCEEEeccccCeEEecCCCCCccccccCCCCccCCCCCccCHHHHHHHHHHHHHH
Confidence 000 0112 3489999999953210 000 0 0000000 001122222222222
Q ss_pred CC-CcEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcC
Q 014151 326 LN-KPVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPW 395 (430)
Q Consensus 326 ~g-kPv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~ 395 (430)
++ +||+|+|+|+.... ....+..|.+|++.++.++.++++++..+.|++.|++.|+ .+|..||+ +++.
T Consensus 364 Y~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~gy~~RfGli~V 441 (468)
T 2j78_A 364 YNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDN--FEWAEGYSKRFGIVYV 441 (468)
T ss_dssp HCCSCEEEEEECCCCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGCCCCSEEE
T ss_pred cCCCCEEEEecCCCCCCccccCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccc--ccccCCcccCCceEEe
Confidence 54 89999999998643 1234689999999999999999998988999999999998 67876654 4443
Q ss_pred CCccHHHHHHHHHHHHhhcccc
Q 014151 396 ERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
|-.+..+..|+++..++.+-..
T Consensus 442 D~~t~~R~~K~S~~wy~~vi~~ 463 (468)
T 2j78_A 442 DYSTQKRIVKDSGYWYSNVVKN 463 (468)
T ss_dssp ETTTTEEEECHHHHHHHHHHHH
T ss_pred eCCCCceeEchHHHHHHHHHHh
Confidence 3222336677777777766433
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=211.04 Aligned_cols=294 Identities=16% Similarity=0.217 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
..++++|++.|+++|+|++|+-+ .|+.++|.+|.+|++.++.+|++|+.|.++||+++++|++ |+ .|.
T Consensus 49 Y~~~~eDi~lm~~~G~~~~R~si----~W~ri~P~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d-------~P~ 116 (423)
T 1vff_A 49 WELYRDDIQLMTSLGYNAYRFSI----EWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLHH-FT-------SPL 116 (423)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEC----CHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CBH
T ss_pred hhccHHHHHHHHHcCCCEEEeec----CHHHhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEccC-Cc-------ccH
Confidence 56789999999999999999932 5999999999999999999999999999999999999985 43 256
Q ss_pred hhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C--CCh
Q 014151 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D--PSG 223 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~--~~~ 223 (430)
|....|+ |.+++.++.|.++++.+++| |++ |..|++.|||.+.. . .+.
T Consensus 117 ~l~~~gg---------w~~~~~~~~f~~ya~~~~~r--------~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 176 (423)
T 1vff_A 117 WFMKKGG---------FLREENLKHWEKYIEKVAEL--------LEK---VKLVATFNEPMVYVMMGYLTAYWPPFIRSP 176 (423)
T ss_dssp HHHHTTG---------GGSGGGHHHHHHHHHHHHHH--------TTT---CCEEEEEECHHHHHHHHHTSCSSTTCCCCH
T ss_pred HHHhcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC---CceEEEecCcchhhhccccccccCCCccch
Confidence 7654332 67899999999999999999 998 88999999997431 0 111
Q ss_pred -HHHHH---H---HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccch-hh----c-cCcchhhc----------
Q 014151 224 -DTLQD---W---IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMW-AS----A-LGSDFIRN---------- 280 (430)
Q Consensus 224 -~~~~~---w---~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w-~~----~-~g~df~~~---------- 280 (430)
..++. . .....+++|+ +...-+++.....+-.+ .+|.+- +. . .-..|...
T Consensus 177 ~~~~~a~h~ll~Aha~Av~~~r~-~~~iG~~~~~~~~~P~~------~~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~ 249 (423)
T 1vff_A 177 FKAFKVAANLLKAHAIAYELLHG-KFKVGIVKNIPIILPAS------DKERDRKAAEKADNLFNWHFLDAIWSGKYRGVF 249 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECCEEEESS------SSHHHHHHHHHHHHHHTHHHHHHHHHCEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCceEEEEeCCceecCC------CCHHHHHHHHHHHHHHHHHHhhHhhccccchhc
Confidence 11111 1 1234455666 43333333221111100 012100 00 0 00001110
Q ss_pred ----cCCCCcceEEeeecCCCCCC-----Cc--------c---hhhhHHH--HHHHHHHHHHhhhhcCCCcEEEEecCCC
Q 014151 281 ----SNNDNIDFASVHIYPDHWFH-----DL--------E---FEDDLKF--VTKWMLSHIEDGDKELNKPVFFTEYGLS 338 (430)
Q Consensus 281 ----~~~~~iD~~s~H~Y~~~w~~-----~~--------~---~~~~~~~--~~~~l~~~~~~a~~~~gkPv~v~EfG~~ 338 (430)
+-...+||+++|+|...... .. . ......| ...-|+..+.... .+++||+|+|+|+.
T Consensus 250 ~~~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~L~~~~-rY~~Pi~ITENG~~ 328 (423)
T 1vff_A 250 KTYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKKAS-RYGRPLYITENGIA 328 (423)
T ss_dssp CEEECCCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHHHHHHHG-GGCSCEEEEECCCC
T ss_pred CccHhhcCCCCEEEEccccceeeeccCCCCCccccccCCCCCCCCCCCCCccCHHHHHHHHHHHH-HcCCCEEEEeCCCC
Confidence 01346899999999642110 00 0 0000000 0111333333333 37889999999997
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhc
Q 014151 339 NLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 339 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
... +..|.+|++.++..+.++++++..+.|++.|++.|+ .+|..||+ +++.|-.+..+..|+++..++.+
T Consensus 329 ~~d----D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~gy~~RfGl~~VD~~~~~R~~K~S~~wy~~~ 402 (423)
T 1vff_A 329 TLD----DEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDN--YEWKEGFGPRFGLVEVDYQTFERRPRKSAYVYGEI 402 (423)
T ss_dssp CSC----HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGTTCCCCCSEEECTTTCCEEECHHHHHHHHH
T ss_pred CCc----cHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCcc--cccccCCCCCCcEEEecCCCCCeeEcHHHHHHHHH
Confidence 653 789999999999999999988888999999999998 67866654 44433122235556666666655
Q ss_pred c
Q 014151 415 S 415 (430)
Q Consensus 415 ~ 415 (430)
-
T Consensus 403 i 403 (423)
T 1vff_A 403 A 403 (423)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-23 Score=208.28 Aligned_cols=302 Identities=17% Similarity=0.238 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
..++++|++.|+++|+|++|+ +. +|+.++|.+|.+|+++++.+|++|+.+.++||.++++|++ |+ .|.
T Consensus 66 Y~~~~eDi~lm~~~G~~~~R~---si-sWsRi~P~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~P~ 133 (454)
T 2o9p_A 66 FHHFKEDVQLMKQLGFLHYRF---SV-AWPRIMPAAGIINEEGLLFYEHLLDEIELAGLIPMLTLYH-WD-------LPQ 133 (454)
T ss_dssp HHHHHHHHHHHHTTTCCEEEE---EC-CHHHHCSSTTCCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------CBH
T ss_pred HHHHHHHHHHHHhcCCceEEe---cc-cHHhhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC-------ccH
Confidence 578999999999999999999 33 5999999999999999999999999999999999999985 53 266
Q ss_pred hhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCCh
Q 014151 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPSG 223 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~~ 223 (430)
|....|+ |.+++..+.|.+|++.+++| |++. |..|.+.|||.+.. ..+.
T Consensus 134 ~L~~~gg---------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~ 194 (454)
T 2o9p_A 134 WIEDEGG---------WTQRETIQHFKTYASVIMDR--------FGER--INWWNTINEPYCASILGYGTGEHAPGHENW 194 (454)
T ss_dssp HHHHTTG---------GGSTHHHHHHHHHHHHHHHH--------SSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCH
T ss_pred HHHhcCC---------CCCcchHHHHHHHHHHHHHH--------hCCc--ceeEEEecCcceecccccccCcCCCCcccH
Confidence 7765442 67889999999999999999 9986 88999999998521 0011
Q ss_pred -HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccC------
Q 014151 224 -DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALG------ 274 (430)
Q Consensus 224 -~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g------ 274 (430)
..++. -.....+++|+.+|+..|.+-....+. .|.. .+|. .|.. ..|
T Consensus 195 ~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~ 270 (454)
T 2o9p_A 195 REAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHV--DAAS--ERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDM 270 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEECCEE--EESS--SCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEeecCcee--ecCC--CCHHHHHHHHHHHHHHhhhhhHHhhCCCCChHH
Confidence 11111 124566778999998766543322111 0100 0111 1100 000
Q ss_pred -------c---c-hh----hccCCCCcceEEeeecCCCCC----CCc---------chh-hhHHH--HHHHHHHHHHhhh
Q 014151 275 -------S---D-FI----RNSNNDNIDFASVHIYPDHWF----HDL---------EFE-DDLKF--VTKWMLSHIEDGD 323 (430)
Q Consensus 275 -------~---d-f~----~~~~~~~iD~~s~H~Y~~~w~----~~~---------~~~-~~~~~--~~~~l~~~~~~a~ 323 (430)
. . |. ..+. ..+||+++++|..... +.. ..+ ....| ...-|+..+....
T Consensus 271 ~~~~~~~~p~~~~~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~ 349 (454)
T 2o9p_A 271 VEWYGTYLNGLDFVQPGDMELIQ-QPGDFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIE 349 (454)
T ss_dssp HHHHGGGGGGGTTCCTTHHHHHC-CCTTEEEEECCCEEEEEECCSSSSSCEEECCCCSSBCTTSCBCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCcccCCCHHHHHHhc-CCCCEEEEccccceEEeccCCCCCCcccccCCCCccCCCCCccChHHHHHHHHHHH
Confidence 0 0 10 0122 2489999999964311 000 000 00000 1112333333333
Q ss_pred hcCC--CcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EE
Q 014151 324 KELN--KPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IV 393 (430)
Q Consensus 324 ~~~g--kPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~ 393 (430)
+.++ +||+|+|.|+.... ....+..|.+|++.++..+.++++++..+.|++.|++.|+ .+|..||+ ++
T Consensus 350 ~rY~~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn--~eW~~gy~~RfGl~ 427 (454)
T 2o9p_A 350 KDFSKGLPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDN--FEWAWGYSKRFGIV 427 (454)
T ss_dssp HTTTTTSCEEEEEECCCCCCCEETTEECCHHHHHHHHHHHHHHHHHTTTTCCEEEEEEECSBCC--CCGGGGGGSCCCSE
T ss_pred HHhCCCCCEEEEeccCCccCCCCCCCcCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCcccc--cccccCccCcCceE
Confidence 3365 89999999997642 1124689999999999999999988988999999999998 67877664 44
Q ss_pred cCCCccHHHHHHHHHHHHhhcc
Q 014151 394 PWERTSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~ 415 (430)
+.|-.+..+..|+++..++.+-
T Consensus 428 ~VD~~t~~R~~K~S~~wy~~vi 449 (454)
T 2o9p_A 428 HINYETQERTPKQSALWFKQMM 449 (454)
T ss_dssp EECTTTCCEEECHHHHHHHHHH
T ss_pred EEeCCCCCeeechHHHHHHHHH
Confidence 4332223366777777776653
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=207.40 Aligned_cols=302 Identities=13% Similarity=0.184 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+ +. +|+.++|. +|.+|+++++.+|++|+.|.++||.++++|++ |+ .|
T Consensus 57 Yh~y~eDi~lm~~~G~~~~R~---si-~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~P 124 (447)
T 1e4i_A 57 YHRYEEDIRLMKELGIRTYRF---SV-SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYH-WD-------LP 124 (447)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhccHHHHHHHHHcCCCeEEe---cC-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------cc
Confidence 578999999999999999999 33 59999998 89999999999999999999999999999985 53 25
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....|+ |.+++..+.|.+|++.+++| |++. |..|.++|||.+.. ..+
T Consensus 125 ~~l~~~gg---------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 185 (447)
T 1e4i_A 125 QALQDAGG---------WGNRRTIQAFVQFAETMFRE--------FHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTN 185 (447)
T ss_dssp HHHHHTTT---------TSSTHHHHHHHHHHHHHHHH--------TBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCC
T ss_pred HHHHhcCC---------CCCchhHHHHHHHHHHHHHH--------hCCc--ceeEEEecCccccccccccccccCCCccc
Confidence 67655432 77899999999999999999 9996 89999999998521 011
Q ss_pred h-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc----
Q 014151 223 G-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS---- 275 (430)
Q Consensus 223 ~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~---- 275 (430)
. ..++. -.....+++|+.+|+..|.+-....+. .|.. .+|. .|.. ..|.
T Consensus 186 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~ 261 (447)
T 1e4i_A 186 LQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWA--VPYS--TSEEDKAACARTISLHSDWFLQPIYQGSYPQF 261 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEECBCCCE--EESS--SCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCcee--ecCC--CCHHHHHHHHHHHHHHhhhhhhhhcCCCCCHH
Confidence 1 11111 124566778999998776554322111 1100 0111 1100 0010
Q ss_pred --c----------h----hhccCCCCcceEEeeecCCCCCC------C-------cc-hhhhHHH--HHHHHHHHHHhhh
Q 014151 276 --D----------F----IRNSNNDNIDFASVHIYPDHWFH------D-------LE-FEDDLKF--VTKWMLSHIEDGD 323 (430)
Q Consensus 276 --d----------f----~~~~~~~~iD~~s~H~Y~~~w~~------~-------~~-~~~~~~~--~~~~l~~~~~~a~ 323 (430)
. | ...+. ..+||+++++|...... . .. ......| ...-|+..+....
T Consensus 262 ~~~~~~~~~~~~p~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~ 340 (447)
T 1e4i_A 262 LVDWFAEQGATVPIQDGDMDIIG-EPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYLQ 340 (447)
T ss_dssp HHHHHHHTTCCCCCCTTHHHHHT-CCCSEEEEECCCCEEEEECTTSTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHGG
T ss_pred HHHHHhhccccCCCCHHHHHHhc-CCCCeeEeccccCeEeecCCCCCCCcccccCCCCCCCCcCCcCChHHHHHHHHHHH
Confidence 0 0 00112 24899999999653110 0 00 0000000 1112333344334
Q ss_pred hcC-CCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEc
Q 014151 324 KEL-NKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVP 394 (430)
Q Consensus 324 ~~~-gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~ 394 (430)
+ + ++||+|+|.|+.... ....+..|..|++.++..+.++++++..+.|++.|++.|+ .+|..||+ +++
T Consensus 341 r-Y~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~gy~~RfGl~~ 417 (447)
T 1e4i_A 341 K-YGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDN--FEWAEGYNMRFGMIH 417 (447)
T ss_dssp G-GCSCCEEEEEECCCCCCCCBTTBCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGSCCCSEE
T ss_pred h-cCCCCEEEEecCCCcccccccCCcccHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCCccc--cccccCccCCCCeEE
Confidence 3 6 589999999998543 1234689999999999999999999999999999999998 67876664 444
Q ss_pred CCCccHHHHHHHHHHHHhhccc
Q 014151 395 WERTSTYKLLTEQSCGLGRISR 416 (430)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (430)
.|-.+..+..|+++..++.+-.
T Consensus 418 VD~~t~~R~~K~S~~wy~~vi~ 439 (447)
T 1e4i_A 418 VDFRTQVRTPKQSYYWYRNVVS 439 (447)
T ss_dssp ECTTTCCEEECHHHHHHHHHHH
T ss_pred ecCCCCceeechHHHHHHHHHH
Confidence 3322233667777777776643
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=206.69 Aligned_cols=305 Identities=12% Similarity=0.092 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+- . .|+.++|.+ |.+|+++++.+|++|+.+.++||+++++|++ |+ . |
T Consensus 56 Y~~~~eDi~lm~~~G~~~~R~s---i-~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H-~d----~---P 123 (431)
T 1ug6_A 56 YRRYEEDIALMQSLGVRAYRFS---V-AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYH-WD----L---P 123 (431)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEE---C-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C---B
T ss_pred hhhhHHHHHHHHHcCCCEEEcc---c-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC----C---C
Confidence 5788999999999999999993 2 599999987 9999999999999999999999999999985 43 2 5
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....| -|.+++..+.|.+|++.+++| |++ .|..|.++|||.+.. ..+
T Consensus 124 ~~l~~~g---------gw~~~~~~~~F~~ya~~~~~~--------~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 184 (431)
T 1ug6_A 124 LALEERG---------GWRSRETAFAFAEYAEAVARA--------LAD--RVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184 (431)
T ss_dssp HHHHTTT---------GGGSHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred cchhhcC---------CCCChHHHHHHHHHHHHHHHH--------hcC--CCceEEEecCcchhhccccccccCCCCccc
Confidence 6765433 277899999999999999999 998 488999999998521 111
Q ss_pred h-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCc------cchhh---ccCc------c----
Q 014151 223 G-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNP------EMWAS---ALGS------D---- 276 (430)
Q Consensus 223 ~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np------~~w~~---~~g~------d---- 276 (430)
. ..++. -.....+++|+ +|+..|.+-....+. .|+...... ..|.. ..|. .
T Consensus 185 ~~~~~~a~h~~llAha~Av~~~r~-~~~~~iG~~~~~~~~--~P~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~ 261 (431)
T 1ug6_A 185 LEAALRAAHHLLLGHGLAVEALRA-AGARRVGIVLNFAPA--YGEDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPP 261 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEECCE--ECSCHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCCCC--ChHHHHHHHHHHHHHHHhhhHHHhCCCCCHHHHHhccc
Confidence 1 11111 12456677899 898765443221111 010000000 00100 0000 0
Q ss_pred --h----hhccCCCCcceEEeeecCCCCCC------------CcchhhhHHH--HHHHHHHHHHhhhhcCCCcEEEEecC
Q 014151 277 --F----IRNSNNDNIDFASVHIYPDHWFH------------DLEFEDDLKF--VTKWMLSHIEDGDKELNKPVFFTEYG 336 (430)
Q Consensus 277 --f----~~~~~~~~iD~~s~H~Y~~~w~~------------~~~~~~~~~~--~~~~l~~~~~~a~~~~gkPv~v~EfG 336 (430)
| ...+. ..+||+++++|...... +........| ...-|+..+....+.+++||+|+|.|
T Consensus 262 ~p~~~~d~~~i~-~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~t~~gW~i~P~gl~~~L~~~~~rY~~Pi~ITENG 340 (431)
T 1ug6_A 262 VPILSRDLELVA-RPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENG 340 (431)
T ss_dssp CCCCTTHHHHHT-CCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTTCCBCCHHHHHHHHHHHHHHCSSCEEEEEEC
T ss_pred CCCCHHHHHHhc-cCCCEEEEeccccceeccCCCCCccccCCCCCCcCCCCCccChHHHHHHHHHHHHHhCCCEEEEecc
Confidence 0 01112 34899999999643110 0000000000 01113333333333377899999999
Q ss_pred CCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHH
Q 014151 337 LSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQ 407 (430)
Q Consensus 337 ~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~ 407 (430)
+..... ...+..|..|++.++..+.++++++..+.|++.|++.|+ .+|..||+ +++.|-.+..+..|++
T Consensus 341 ~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~gy~~RfGl~~VD~~t~~R~~K~S 418 (431)
T 1ug6_A 341 AAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDN--FEWAFGYTRRFGLYYVDFPSQRRIPKRS 418 (431)
T ss_dssp CCCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCC--CCGGGGGGSCCCSEEEETTTTEEEEBHH
T ss_pred CCcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEecCccc--cccccCCCCCccEEEecCCCCCeeEchH
Confidence 976431 234689999999999999999999999999999999998 67876654 4443322233667777
Q ss_pred HHHHhhcccc
Q 014151 408 SCGLGRISRL 417 (430)
Q Consensus 408 ~~~~~~~~~~ 417 (430)
+..++.+-..
T Consensus 419 ~~wy~~~i~~ 428 (431)
T 1ug6_A 419 ALWYRERIAR 428 (431)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 7777766443
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=205.17 Aligned_cols=304 Identities=14% Similarity=0.188 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+ +. +|+.++|. +|.+|+++++.+|++|+.+.++||+++++|++ |+ .|
T Consensus 57 Y~~~~eDi~lm~~~G~~~~R~---si-~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h-~d-------~P 124 (449)
T 1qox_A 57 YHRVEEDVQLLKDLGVKVYRF---SI-SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYH-WD-------LP 124 (449)
T ss_dssp TSCHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhhHHHHHHHHhcCCCeEEe---cC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCC-Cc-------cc
Confidence 467899999999999999999 33 59999998 89999999999999999999999999999985 53 25
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....|+ |.+++..+.|.+|++.+++| |+++ |..|.+.|||.+.. ..+
T Consensus 125 ~~l~~~gg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 185 (449)
T 1qox_A 125 QALQDQGG---------WGSRITIDAFAEYAELMFKE--------LGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKD 185 (449)
T ss_dssp HHHHTTTG---------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred HHHHhcCC---------CCCchHHHHHHHHHHHHHHH--------hCCC--CceEEEccCCcceeccccccCccCCCccc
Confidence 67654332 67889999999999999999 9986 88999999998521 011
Q ss_pred h-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc----
Q 014151 223 G-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS---- 275 (430)
Q Consensus 223 ~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~---- 275 (430)
. ..++. -.....+++|+.+|+..|.+-....+.. |.. .+|. .|.. ..|.
T Consensus 186 ~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~--P~~--~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~ 261 (449)
T 1qox_A 186 LQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAV--PYR--RTKEDMEACLRVNGWSGDWYLDPIYFGEYPKF 261 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEECCCCEEE--ESS--SCHHHHHHHHHHHHTTTHHHHHHHHTSSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeecCceee--cCC--CCHHHHHHHHHHHHHHhHHHhHHhhCCCCChH
Confidence 1 11111 1245667789999987765543221110 100 0111 1100 0110
Q ss_pred ------------chh----hccCCCCcceEEeeecCCCCC---CC---c---------c-hhhhHHH--HHHHHHHHHHh
Q 014151 276 ------------DFI----RNSNNDNIDFASVHIYPDHWF---HD---L---------E-FEDDLKF--VTKWMLSHIED 321 (430)
Q Consensus 276 ------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~---~---------~-~~~~~~~--~~~~l~~~~~~ 321 (430)
.|. ..+. ..+||+++++|..... .. . . ......| ...-|+..+..
T Consensus 262 ~~~~~~~~~~~p~~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~ 340 (449)
T 1qox_A 262 MLDWYENLGYKPPIVDGDMELIH-QPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRY 340 (449)
T ss_dssp HHHHHHHHTCCCCCCTTHHHHHC-CCCSEEEEECSCEEEEEECSSGGGTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHhc-cCCCEEEeecCcCeEEecCCCcCCCCCcccccCCCCCcCCCCCccChHHHHHHHHH
Confidence 000 0112 2489999999964211 00 0 0 0000000 01112333333
Q ss_pred hhhcCCC-cEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----
Q 014151 322 GDKELNK-PVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG---- 391 (430)
Q Consensus 322 a~~~~gk-Pv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~---- 391 (430)
..+.+++ ||+|+|.|+.... ....+..|..|++.++..+.++++++..+.|++.|++.|+ .+|..||+
T Consensus 341 ~~~rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~gy~~RfG 418 (449)
T 1qox_A 341 TADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDN--FEWAEGYGMRFG 418 (449)
T ss_dssp HHHHTTSCCEEEEECCCCCCCCCCTTSSCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGTTSSCCC
T ss_pred HHHHcCCCcEEEEeccCCCCCCcCCCCccCcHHHHHHHHHHHHHHHHHHHCCCCEEEEEeCCCccc--ccccccccCCCC
Confidence 3223665 9999999998543 1234689999999999999999999999999999999998 67877665
Q ss_pred EEcCCCccHHHHHHHHHHHHhhcccc
Q 014151 392 IVPWERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 392 i~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
+++.|-.+..+..|+++..++.+-..
T Consensus 419 lv~VD~~t~~R~~K~S~~wy~~vi~~ 444 (449)
T 1qox_A 419 LVHVDYDTLVRTPKDSFYWYKGVISR 444 (449)
T ss_dssp SEEEETTTTEEEECHHHHHHHHHHHH
T ss_pred cEEecCCCCceeechHHHHHHHHHHh
Confidence 44332222336677777777766433
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=217.37 Aligned_cols=240 Identities=19% Similarity=0.240 Sum_probs=165.1
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||||++++|+|.|..........+.+.++++|+.||++|+|+||++.. +. +
T Consensus 308 ~~GfR~ve~~~~~f~lNGkpi~l~Gvn~h~~~p~~G~~~~~e~~~~dl~lmK~~G~N~VR~~hy-----p~--------~ 374 (1024)
T 1yq2_A 308 RLGFRTVRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHY-----PP--------H 374 (1024)
T ss_dssp EECCCCEEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTS-----CC--------C
T ss_pred eeceEEEEEeCCEEEECCceEEEEEEEccCCccccccCCCHHHHHHHHHHHHHcCCCEEEecCC-----CC--------C
Confidence 4577 6778999999999999999997643222112357899999999999999999999632 11 1
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
++++++|+++||+|+..+. .+. .|. .|..|. .....+|+.++.+.+.++.+++|
T Consensus 375 -------~~fydlcDe~Gi~V~~E~~-~~~--~g~-~~~~w~-----------~~~~~~p~~~~~~~~~~~~mV~r---- 428 (1024)
T 1yq2_A 375 -------PRLLDLADEMGFWVILECD-LET--HGF-EAGGWV-----------ENPSDVPAWRDALVDRMERTVER---- 428 (1024)
T ss_dssp -------HHHHHHHHHHTCEEEEECS-CBC--GGG-TTTTTT-----------TCGGGCGGGHHHHHHHHHHHHHH----
T ss_pred -------HHHHHHHHHCCCEEEEcCC-ccc--CCc-cccccc-----------ccCCCCHHHHHHHHHHHHHHHHH----
Confidence 4779999999999998762 121 111 122331 11235688899999999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
++|||+|++|++.||+... .++++|.+.||++||+|+|+.+. +.
T Consensus 429 ----~rNHPSIi~WslgNE~~~g---------~~~~~l~~~ik~~DptRpv~~~~-~~---------------------- 472 (1024)
T 1yq2_A 429 ----DKNHPSIVMWSLGNESGTG---------SNLAAMAAWAHARDSSRPVHYEG-DY---------------------- 472 (1024)
T ss_dssp ----HTTCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECTT-CT----------------------
T ss_pred ----cCCCCeEEEEECCcCcchH---------HHHHHHHHHHHHhCCCceEEeCC-cc----------------------
Confidence 9999999999999999752 24688999999999999998753 10
Q ss_pred chhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHH---------HH-HhhhhcCCCcEEEEecCCCCCCCCCC
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLS---------HI-EDGDKELNKPVFFTEYGLSNLIKGFE 345 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~---------~~-~~a~~~~gkPv~v~EfG~~~~~~~~~ 345 (430)
....+|++++ .|+.. +.+..|+.. +. .... ..+||++++|||....+.
T Consensus 473 ------~~~~~Dv~s~-~Y~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~kP~i~~Eygha~gn~--- 530 (1024)
T 1yq2_A 473 ------TGAYTDVYSR-MYSSI-----------PETDSIGRNDSHALLLGCDSAESAR-QRTKPFILCEYVHAMGNG--- 530 (1024)
T ss_dssp ------TCSSCSSEEE-ESCCH-----------HHHHHHHCSSCCCCCTTCCHHHHHH-HTTSCEEEEEESCCCSSC---
T ss_pred ------cCCccceecc-CCCCH-----------HHHHHHHhcccccccccccchhhcc-CCCCceEEEeeccccCCC---
Confidence 1245789999 66631 112222210 00 0002 268999999999764332
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCC
Q 014151 346 PSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 346 ~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
...-.+| .+.+.+ .+...|.++|.|.|.+
T Consensus 531 ~g~~~~y----~~~~~~----~~~~~G~fiW~~~D~~ 559 (1024)
T 1yq2_A 531 PGAMDQY----EALVDK----YPRLHGGFVWEWRDHG 559 (1024)
T ss_dssp CCCHHHH----HHHHHH----CTTEEEEEESCSBCCC
T ss_pred ccCHHHH----HHHHHh----CCcceEEEEeeccccc
Confidence 1111233 222322 3468999999999985
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=204.30 Aligned_cols=306 Identities=14% Similarity=0.142 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
..++++|++.|+++|+|++|+-+ .|+.++|. +|.+|+..++.+|++|+.|.++||.++++|++ |+ .
T Consensus 70 Y~~~~eDi~lm~~~G~~~~R~si----sW~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d----~--- 137 (479)
T 2xhy_A 70 YGHYKEDIKLFAEMGFKCFRTSI----AWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSH-FE----M--- 137 (479)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC----CHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C---
T ss_pred hhhhHHHHHHHHHcCCCEEEeeC----CHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCC-CC----C---
Confidence 46899999999999999999932 59899987 78999999999999999999999999999986 53 2
Q ss_pred hhhhhh-hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC--C-CC-------
Q 014151 154 VNWAWE-EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS--D-PS------- 222 (430)
Q Consensus 154 ~~W~~~-~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~--~-~~------- 222 (430)
|.|... .|+ |.+++.++.|.+|++.+++| |++ .|..|.++|||.+.. . .-
T Consensus 138 P~~l~~~~gg---------w~~~~~~~~F~~ya~~~~~~--------~gd--~V~~w~t~NEp~~~~~~~~gy~~~~~~G 198 (479)
T 2xhy_A 138 PLHLVQQYGS---------WTNRKVVDFFVRFAEVVFER--------YKH--KVKYWMTFNEINNQRNWRAPLFGYCCSG 198 (479)
T ss_dssp BHHHHHHSCG---------GGSTHHHHHHHHHHHHHHHH--------TTT--TCCEEEEETTTTGGGSTTSTTHHHHHHS
T ss_pred CHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--CCCcEEEecCcchhhhcccccccccccc
Confidence 566654 221 77899999999999999999 999 577899999998653 0 00
Q ss_pred --h--------HHHH------HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc------------chhh---
Q 014151 223 --G--------DTLQ------DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE------------MWAS--- 271 (430)
Q Consensus 223 --~--------~~~~------~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~------------~w~~--- 271 (430)
+ ..++ .-.....+++|+.+|+..|.+-....+. .|.. .+|. .|..
T Consensus 199 ~~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IG~~~~~~~~--~P~~--~~p~D~~aa~~~~~~~~~f~d~~ 274 (479)
T 2xhy_A 199 VVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPL--YPYS--CNPDDVMFAQESMRERYVFTDVQ 274 (479)
T ss_dssp CCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECCCE--EESB--SCHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcee--eCCC--CCHHHHHHHHHHHHhccchhhhe
Confidence 0 0111 1123556678999998777543321111 0100 0111 1100
Q ss_pred ccCc----------------chh----hccCCCCcceEEeeecCCCCCCC-----cch---------h----hhHHH--H
Q 014151 272 ALGS----------------DFI----RNSNNDNIDFASVHIYPDHWFHD-----LEF---------E----DDLKF--V 311 (430)
Q Consensus 272 ~~g~----------------df~----~~~~~~~iD~~s~H~Y~~~w~~~-----~~~---------~----~~~~~--~ 311 (430)
..|. .|. ..+....+||+++++|....... ... + ....| .
T Consensus 275 ~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~p~~~~t~~gW~i~ 354 (479)
T 2xhy_A 275 LRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQID 354 (479)
T ss_dssp HHCSCCHHHHHHHHHHTCCCCCCTTHHHHHHHTCCSSEEEECCCCEEECSSSCC------CTTEECCTTCEECTTCCEEC
T ss_pred eCCCCCHHHHHHHHhcCCCCCCCHHHHHHHHhcCCCEEEeccccceEeecCCCCCCcccccccccCCCCCCcCCCCCeec
Confidence 0110 000 00011358999999997531110 000 0 00000 1
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHH-hcCCCcccceeeeeccCCCcc
Q 014151 312 TKWMLSHIEDGDKELNKPVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIWQLFVEGMEE 385 (430)
Q Consensus 312 ~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W~~~~~~~~~ 385 (430)
..-|+..+....+.+++||+|+|.|+.... ....+..|.+|++.++.++.+++ +++..+.|++.|++.|+ .+
T Consensus 355 P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~Wsl~Dn--~e 432 (479)
T 2xhy_A 355 PVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDC--VS 432 (479)
T ss_dssp HHHHHHHHHHHHHHHCSCEEEEECCCCBCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCCEEEECCBTSBCC--CC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCCCccCCcCcCCccCcHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccccc--cc
Confidence 112333333333347899999999997642 12357899999999999999999 88889999999999998 78
Q ss_pred CCCC-c----eEEcCC-C-c---cHHHHHHHHHHHHhhccccc
Q 014151 386 YNDD-F----GIVPWE-R-T---STYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 386 ~~dg-~----~i~~~~-~-~---~~~~~~~~~~~~~~~~~~~~ 418 (430)
|..| | ++++.| + + +..+..|+++..++.+-..|
T Consensus 433 W~~G~y~~RfGli~VD~~~~g~gt~~R~~K~S~~wy~~vi~~n 475 (479)
T 2xhy_A 433 FTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASN 475 (479)
T ss_dssp SSSCCSSSBCCSEEECCCTTSCCCCCEEECHHHHHHHHHHHTT
T ss_pred cccCCccCCCCCeEeccCCCCCCCcceeechHHHHHHHHHHhC
Confidence 8877 5 443322 1 1 33477788888777765443
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=216.75 Aligned_cols=233 Identities=16% Similarity=0.209 Sum_probs=162.6
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||+|++++|+|.+.....+ ...+.+.++++|+.||++|+|+||++. ++ + +
T Consensus 332 ~~GfR~ie~~~~~f~lNGk~i~lrGvn~h~~~~~G-~~~~~e~~~~dl~lmK~~G~N~IR~~h-----yp---~-----~ 397 (1010)
T 3bga_A 332 EVGFRTSEIKDGRFCINGVPVLVKGTNRHEHSQLG-RTVSKELMEQDIRLMKQHNINMVRNSH-----YP---T-----H 397 (1010)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEEECCCBTTB-SCCCHHHHHHHHHHHHHTTCCEEEETT-----SC---C-----C
T ss_pred eeCceEEEEeCCEEEECCceEEEECcccCCccccc-CcCCHHHHHHHHHHHHHCCCCEEEeCC-----CC---C-----C
Confidence 4577 67789999999999999999976433222 346899999999999999999999953 22 1 1
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
++++++|+++||+|+..+.. |. . |.. | + ......+|+.++.+.+.++.+++|
T Consensus 398 -------~~~ydlcDe~Gi~V~~E~~~-~~-~-g~~----~----~------~~~~~~~~~~~~~~~~~~~~mV~r---- 449 (1010)
T 3bga_A 398 -------PYWYQLCDRYGLYMIDEANI-ES-H-GMG----Y----G------PASLAKDSTWLTAHMDRTHRMYER---- 449 (1010)
T ss_dssp -------HHHHHHHHHHTCEEEEECSC-BC-G-GGC----S----S------TTCTTTCGGGHHHHHHHHHHHHHH----
T ss_pred -------HHHHHHHHHCCCEEEEccCc-cc-c-Ccc----c----c------CCcCCCCHHHHHHHHHHHHHHHHH----
Confidence 36799999999999987632 11 1 110 0 0 011234678888999999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
++|||+|++|.++||+... ..+++|++.||++||+|+|+.+..+
T Consensus 450 ----~rNHPSIi~WslgNE~~~g---------~~~~~l~~~ik~~DptRpV~~~~~~----------------------- 493 (1010)
T 3bga_A 450 ----SKNHPAIVIWSQGNEAGNG---------INFERTYDWLKSVEKGRPVQYERAE----------------------- 493 (1010)
T ss_dssp ----HTTCTTEEEEECCSSSCCS---------HHHHHHHHHHHHHCSSSCEECGGGT-----------------------
T ss_pred ----hCCCCEEEEEECccCcCcH---------HHHHHHHHHHHHHCCCCcEEeCCCC-----------------------
Confidence 9999999999999999752 2467899999999999999976310
Q ss_pred chhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKT 355 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~ 355 (430)
+ .. ..|++++ .|+.. +. +..... .. ..+||++++|||...... ...-.+|.
T Consensus 494 -~----~~-~~Di~~~-~Y~~~-----------~~----~~~~~~-~~-~~~kP~i~sEyg~a~gn~---~g~~~~y~-- 544 (1010)
T 3bga_A 494 -L----NY-NTDIYCR-MYRSV-----------DE----IKAYVG-KK-DIYRPFILCEYLHAMGNS---CGGMKEYW-- 544 (1010)
T ss_dssp -T----SS-SCSSBCC-TTCCH-----------HH----HHHHHT-ST-TCCSCEEEEEESCCCSSC---CTTHHHHH--
T ss_pred -c----cc-cccEeec-cCCCh-----------HH----HHhhhh-cc-CCCCcEEEEEccccCCCC---CcCHHHHH--
Confidence 0 12 4678887 56531 11 222222 12 268999999999764331 11122232
Q ss_pred HHHHHHHHHhcCCCcccceeeeeccCCC
Q 014151 356 ILDIVYKSAKRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 356 ~~~~~~~~~~~~~~~~G~~~W~~~~~~~ 383 (430)
+.+ .+.+...|.++|.|.|.+.
T Consensus 545 --~~~----~~~p~~~G~fiW~~~D~~~ 566 (1010)
T 3bga_A 545 --EVF----ENEPMAQGGCIWDWVDQNF 566 (1010)
T ss_dssp --HHH----TTCTTEEEEEESCSBCCCE
T ss_pred --HHH----HhCCcceEEEeEeeEccee
Confidence 222 2334689999999998753
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-23 Score=210.42 Aligned_cols=311 Identities=15% Similarity=0.179 Sum_probs=197.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCC---CCC---------------------------hHHHHHHHH
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG---QFD---------------------------ERVFKALDH 124 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg---~~d---------------------------e~~l~~lD~ 124 (430)
....+++|++.|+++|+|++|+ +. +|++++|.+| .+| +++++.+|+
T Consensus 58 ~Y~~y~eDi~l~~~lG~~~~R~---si-~WsRI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~ 133 (473)
T 3apg_A 58 YWHLYKQDHDIAEKLGMDCIRG---GI-EWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRK 133 (473)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHcCCCEEEE---ec-chhhccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHH
Confidence 3578999999999999999999 33 6999999999 899 999999999
Q ss_pred HHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 125 VIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGI----GISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 125 ~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~----~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
+|+.+.++||++|++|.+ |+ .|.|....|. .. .....=|.+++....|.+|.+.+++| |
T Consensus 134 ~id~l~~~Gi~pivtL~H-~~-------lP~wl~d~~~~~~~~~-~~~~~Gw~~~~~v~~F~~ya~~~~~~--------~ 196 (473)
T 3apg_A 134 IYSDWKERGKTFILNLYH-WP-------LPLWIHDPIAVRKLGP-DRAPAGWLDEKTVVEFVKFAAFVAYH--------L 196 (473)
T ss_dssp HHHHHHTTTCEEEEESCC-SC-------CCTTTBCHHHHHHHCT-TSSCBGGGSHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHCCCEEEEEeCC-CC-------CCHHHHhCCCcccccc-CCccCCCCCccHHHHHHHHHHHHHHH--------h
Confidence 999999999999999975 53 2556543220 00 11112278899999999999999999 9
Q ss_pred cCCCceeEEeecCCCCCCC-----------CC---Ch-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCC
Q 014151 201 RNDPTIFAWELINEPRCMS-----------DP---SG-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP 259 (430)
Q Consensus 201 k~~p~I~~wel~NEp~~~~-----------~~---~~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~ 259 (430)
++. |..|.++|||.+.. .+ +. ...+. -.....+++|+. +...|.+-....+. .|
T Consensus 197 gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~lllAHa~A~~~~r~~-~~~~IGi~~~~~~~--~P 271 (473)
T 3apg_A 197 DDL--VDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEY-SEKSVGVIYAFAWH--DP 271 (473)
T ss_dssp GGG--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEEEEEECCEE--EE
T ss_pred CCc--ceEEEEecCcchhhcccccccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeCCee--ec
Confidence 985 88999999997521 01 11 11111 124555678887 44444332211110 01
Q ss_pred CCcccCccc-hhhccCcchhhccC--CCCcceEEeeecCCCCCC----------Ccch------------h-hhHHH--H
Q 014151 260 KRLTVNPEM-WASALGSDFIRNSN--NDNIDFASVHIYPDHWFH----------DLEF------------E-DDLKF--V 311 (430)
Q Consensus 260 ~~~~~np~~-w~~~~g~df~~~~~--~~~iD~~s~H~Y~~~w~~----------~~~~------------~-~~~~~--~ 311 (430)
.. ..+|.+ -+......|..+.. ...+||+++++|...... .... + ....| .
T Consensus 272 ~~-~~~~~d~~aa~~~~~~~~dp~~d~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~ 350 (473)
T 3apg_A 272 LA-EEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMY 350 (473)
T ss_dssp SS-GGGHHHHHHHHHHHHHHHHHHHHTTCCSCEEEECCCEEEEEESSSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCC
T ss_pred CC-CCCHHHHHHHHHHhhhcCceeEecCCCCeeEEcCccceEEecCCccccCCCCcccccccccccCCCCCcCCCCCccc
Confidence 00 001110 00000000100000 245899999999642110 0000 0 00000 1
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce
Q 014151 312 TKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG 391 (430)
Q Consensus 312 ~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~ 391 (430)
..-|+..+....+.+++||+|+|.|+.... +..|..|++.++..+.++++++..+.|++.|++.|+ .+|..||+
T Consensus 351 P~GL~~~L~~~~~rY~~Pi~ITENG~~~~~----D~~Ri~yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn--~EW~~Gy~ 424 (473)
T 3apg_A 351 PEGLENLLKYLNNAYELPMIITENGMADAA----DRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDN--YEWAQGFR 424 (473)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECCCCCTT----CSSHHHHHHHHHHHHHHHHTTTCCEEEEEESCSBCC--CCGGGGGG
T ss_pred HHHHHHHHHHHHHHhCCeEEEEecCCCCCC----chHHHHHHHHHHHHHHHHHHcCCCEEEEEEeccccc--Cccccccc
Confidence 122333333333337889999999997652 568999999999999999999989999999999998 77877664
Q ss_pred ----EEcCCCccHHHHHHHHHHHHhhccccc
Q 014151 392 ----IVPWERTSTYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 392 ----i~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (430)
+++.|-.+..+..|+++..++.+-..|
T Consensus 425 ~RfGL~~VD~~t~~R~pK~S~~wy~~ii~~n 455 (473)
T 3apg_A 425 MRFGLVYVDFETKKRYLRPSALVFREIATQK 455 (473)
T ss_dssp SCCCSEEECTTTCCEEECHHHHHHHHHHHHT
T ss_pred CcCCeEEecCCCCceeecHHHHHHHHHHHhC
Confidence 444332223366777777777764444
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=214.53 Aligned_cols=250 Identities=20% Similarity=0.249 Sum_probs=166.0
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||||++++|+|.|..........+.+.++++|+.||++|+|+||++.. + +.|
T Consensus 334 ~~GfR~iei~~~~f~lNGkpi~lkGvn~H~~~p~~G~a~~~e~~~~Di~lmK~~g~NaVRtsHy-----p---~~~---- 401 (1032)
T 3oba_A 334 HVGFRQVELKDGNITVNGKDILFRGVNRHDHHPRFGRAVPLDFVVRDLILMKKFNINAVRNSHY-----P---NHP---- 401 (1032)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTS-----C---CCT----
T ss_pred EeccEEEEEeCCEEEECCeEEEEeccCcCccCcccCcCCCHHHHHHHHHHHHHcCCcEEEecCC-----C---ChH----
Confidence 4577 7778999999999999999998744322223357899999999999999999999542 1 111
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhh-hCCCCCC---------CCCC-CCCCHHHHHHHHHH
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE-EGIGISS---------SNDS-FFFDPSIHKYFKHY 184 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~-~G~~~~~---------~~~~-f~~d~~~~~~~~~~ 184 (430)
+++++|+++||+|+-...- .. .|. ..|... .+..... .... .-.+|+.++.+.+.
T Consensus 402 --------~fydlCDe~Gi~V~dE~~~--e~-hG~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~~~~~~ 467 (1032)
T 3oba_A 402 --------KVYDLFDKLGFWVIDEADL--ET-HGV---QEPFNRHTNLEAEYPDTKNKLYDVNAHYLSDNPEYEVAYLDR 467 (1032)
T ss_dssp --------THHHHHHHHTCEEEEECSC--BC-GGG---GHHHHHHTTCCCCCTTTTHHHHTTTGGGTTTCGGGHHHHHHH
T ss_pred --------HHHHHHHHCCCEEEEcccc--cc-CCc---cccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 5689999999999876421 11 111 112110 0000000 0011 13468889999999
Q ss_pred HHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCccc
Q 014151 185 VKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTV 264 (430)
Q Consensus 185 ~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~ 264 (430)
++.+++| ++|||+|++|.++||+... . .+++|++.+|++||+|+|+... .+
T Consensus 468 ~~~mV~R--------drNHPSIi~WslgNE~~~g-----~----~~~~~~~~~k~~DptRpv~~e~--~~---------- 518 (1032)
T 3oba_A 468 ASQLVLR--------DVNHPSIIIWSLGNEACYG-----R----NHKAMYKLIKQLDPTRLVHYEG--DL---------- 518 (1032)
T ss_dssp HHHHHHH--------HTTCTTEEEEECCBSCCCC-----H----HHHHHHHHHHHHCTTSEEECTT--CT----------
T ss_pred HHHHHHH--------hcCCCeEEEEECccCCccc-----h----hHHHHHHHHHHhCCCCcEEecc--Cc----------
Confidence 9999999 9999999999999998653 1 3578999999999999998642 10
Q ss_pred CccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCC
Q 014151 265 NPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGF 344 (430)
Q Consensus 265 np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~ 344 (430)
.....|++|. .|+.. +.+..++..... .....+||++++|||....++.
T Consensus 519 -----------------~~~~~Di~s~-mY~~~-----------~~i~~~~~~~~~-~~~~~~kP~i~~Ey~Hamgn~~- 567 (1032)
T 3oba_A 519 -----------------NALSADIFSF-MYPTF-----------EIMERWRKNHTD-ENGKFEKPLILCEYGHAMGNGP- 567 (1032)
T ss_dssp -----------------TCTTCSSEEE-ESCCH-----------HHHHHHHHHHBC-TTSCBSSCEEEEEESCCCSSCC-
T ss_pred -----------------Ccccceeeec-cCCCH-----------HHHHHHHhhCcc-cccccCCCEEEEeccccccCCC-
Confidence 1245788887 67642 112223322100 0111389999999998876521
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCC
Q 014151 345 EPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 345 ~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~ 383 (430)
..-.+| .+.+.+ .+.+.|.++|.|.|++.
T Consensus 568 --g~l~~y----w~~~~~----~p~~~GgfiWdw~Dq~~ 596 (1032)
T 3oba_A 568 --GSLKEY----QELFYK----EKFYQGGFIWEWANHGI 596 (1032)
T ss_dssp --CCHHHH----HHHHHH----CTTEEEEEESCSBCCCE
T ss_pred --CCHHHH----HHHHHh----CCCeeEEEEEecccccc
Confidence 222233 333333 35799999999999764
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=207.65 Aligned_cols=309 Identities=17% Similarity=0.194 Sum_probs=197.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCC------------------CCC------------hHHHHHHHH
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG------------------QFD------------ERVFKALDH 124 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg------------------~~d------------e~~l~~lD~ 124 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+| .+| +++++.+|+
T Consensus 58 ~Y~~y~eDi~lm~~~G~~~~R~---si-sWsRi~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~ 133 (481)
T 1qvb_A 58 YWNLNQNDHDLAEKLGVNTIRV---GV-EWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVE 133 (481)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCccEe---cc-chhhhCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHH
Confidence 3578999999999999999999 33 6999999888 899 999999999
Q ss_pred HHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 125 VIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGI----GISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 125 ~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~----~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
+|+.+.++||+++++|.+ |+ .|.|....|. .. .....=|.+++..+.|.+|.+.+++| |
T Consensus 134 ~id~l~~~Gi~p~vtL~H-~~-------lP~~L~~~~~~~~~~~-~~~~gGw~n~~~~~~F~~ya~~~~~~--------~ 196 (481)
T 1qvb_A 134 MYKDWVERGRKLILNLYH-WP-------LPLWLHNPIMVRRMGP-DRAPSGWLNEESVVEFAKYAAYIAWK--------M 196 (481)
T ss_dssp HHHHHHTTTCEEEEESCC-SC-------CBTTTBCHHHHHHHCG-GGSCBGGGSTHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHCCCEEEEEeCC-CC-------CCHHHHhcCCcccccc-cccCCCcCCchHHHHHHHHHHHHHHH--------h
Confidence 999999999999999975 53 2455543220 00 00011167888999999999999999 9
Q ss_pred cCCCceeEEeecCCCCCCC----------C-C---Ch-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCC
Q 014151 201 RNDPTIFAWELINEPRCMS----------D-P---SG-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP 259 (430)
Q Consensus 201 k~~p~I~~wel~NEp~~~~----------~-~---~~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~ 259 (430)
++. |..|.++|||.+.. . + +. ..++. -..+..+++|+.+|+ .|.+-....+..+.+
T Consensus 197 gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~~llAHa~A~~~~r~~~~~-~IGi~~~~~~~~P~~ 273 (481)
T 1qvb_A 197 GEL--PVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKK-PVGLIYAFQWFELLE 273 (481)
T ss_dssp TTS--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CEEEEEECCEEECSS
T ss_pred CCC--ccEEEEecccchhhcccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC-cEEEEeeCCeeecCC
Confidence 986 88999999997521 0 1 11 11111 124556778899988 444322111110100
Q ss_pred CCcccCcc----------chhh---ccCc-----chhhccCCCCcceEEeeecCCCCCC----------C--------c-
Q 014151 260 KRLTVNPE----------MWAS---ALGS-----DFIRNSNNDNIDFASVHIYPDHWFH----------D--------L- 302 (430)
Q Consensus 260 ~~~~~np~----------~w~~---~~g~-----df~~~~~~~~iD~~s~H~Y~~~w~~----------~--------~- 302 (430)
. ++. .|.. ..|. .|... ....+||+++++|...... . .
T Consensus 274 ~----d~~aa~~~~~~~~~~fld~~~~G~yp~~~~~~~~-~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~ 348 (481)
T 1qvb_A 274 G----PAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRD-LANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGI 348 (481)
T ss_dssp S----CCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTT-TSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCB
T ss_pred C----CHHHHHHHHHHHhhhhhHHHhCCCCCCCCCCCHH-HcCCCceEEEecccceEEeccCcccccCCccccccccccc
Confidence 0 110 0100 0010 00000 1235899999999642110 0 0
Q ss_pred ---chh-hhHHH--HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceee
Q 014151 303 ---EFE-DDLKF--VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIW 376 (430)
Q Consensus 303 ---~~~-~~~~~--~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W 376 (430)
..+ ....| ...-|+..+....+.+++||+|+|.|+.... +..|..|++.++.++.++++++..+.|++.|
T Consensus 349 ~~~~~~~t~~gW~i~P~GL~~~L~~~~~rY~~Pi~ITENG~~~~~----D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~W 424 (481)
T 1qvb_A 349 SPAENPCSDFGWEVYPEGLYLLLKELYNRYGVDLIVTENGVSDSR----DALRPAYLVSHVYSVWKAANEGIPVKGYLHW 424 (481)
T ss_dssp CTTSCBBCTTCCBCCTHHHHHHHHHHHHHHCCEEEEEECCCCCTT----CSSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCCcCCCCCccchHHHHHHHHHHHHHhCCCEEEEeCCCCccc----cHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 000 00000 0112333333333337899999999997653 5689999999999999999999899999999
Q ss_pred eeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhccccc
Q 014151 377 QLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 377 ~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (430)
++.|+ .+|..||+ +++.|-.+..+..|+++..++.+-..|
T Consensus 425 Sl~Dn--~EW~~Gy~~RfGLv~VD~~t~~R~pK~S~~wy~~vi~~n 468 (481)
T 1qvb_A 425 SLTDN--YEWAQGFRQKFGLVMVDFKTKKRYLRPSALVFREIATHN 468 (481)
T ss_dssp CSBCC--CCGGGTTSSCCCSEEEETTTTEEEECHHHHHHHHHHHHT
T ss_pred ccccc--ccccCCCCCCceEEEEeCCCCceeEchHHHHHHHHHHhC
Confidence 99998 77877665 443321223366677777777664443
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-21 Score=211.49 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=161.7
Q ss_pred CCCc--EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGF--VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gf--v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
+.|| |++++++|++||||++++|+|.|..........+.+.++++|+.||++|+|+||++. ++ + +
T Consensus 329 ~~GfR~ie~~~~~f~lNGkpi~lrGvn~h~~~p~~G~~~~~e~~~~dl~lmK~~g~N~vR~~h-----yp---~-----~ 395 (1023)
T 1jz7_A 329 DVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH-----YP---N-----H 395 (1023)
T ss_dssp EECBCCEEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTT-----SC---C-----C
T ss_pred EEeeEEEEEeCCEEEECCEEEEEEEeeccccCcccccCCCHHHHHHHHHHHHHcCCCEEEecC-----CC---C-----C
Confidence 4577 677899999999999999999764322212235789999999999999999999953 22 1 1
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
++++++|+++||+|+..+.. +. . |. |. ......+|+.++.+.+.++.+++|
T Consensus 396 -------~~~~dlcDe~Gi~V~~E~~~-~~-~-g~-----~~----------~~~~~~~p~~~~~~~~~~~~mV~r---- 446 (1023)
T 1jz7_A 396 -------PLWYTLCDRYGLYVVDEANI-ET-H-GM-----VP----------MNRLTDDPRWLPAMSERVTRMVQR---- 446 (1023)
T ss_dssp -------HHHHHHHHHHTCEEEEECSC-BC-T-TS-----SS----------TTTTTTCGGGHHHHHHHHHHHHHH----
T ss_pred -------HHHHHHHHHCCCEEEECCCc-cc-C-Cc-----cc----------cCcCCCCHHHHHHHHHHHHHHHHH----
Confidence 36799999999999987632 11 1 11 10 011234678889999999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
++|||+|++|.++||+... ..+++|++.||++||+|+|+.+..+.
T Consensus 447 ----~rNHPSIi~WslgNE~~~~---------~~~~~l~~~ik~~DptRpv~~~~~~~---------------------- 491 (1023)
T 1jz7_A 447 ----DRNHPSVIIWSLGNESGHG---------ANHDALYRWIKSVDPSRPVQYEGGGA---------------------- 491 (1023)
T ss_dssp ----HTTCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECCTTTS----------------------
T ss_pred ----hCCCCEEEEEECccCCcch---------HHHHHHHHHHHHhCCCCeEEecCCCC----------------------
Confidence 9999999999999999753 24678999999999999998753110
Q ss_pred chhhccCCCCcceEEeeecCCCCC--CCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWF--HDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLY 353 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~--~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~ 353 (430)
..+.+|++++| |+.... +....+ .++...-..... .+||++++|||...... ...-.+|
T Consensus 492 ------~~~~~Dv~s~~-Y~~~~~~~p~~~~~-------~~~~~~~~~~~~-~~kP~i~~Eygha~gns---~~~~~~y- 552 (1023)
T 1jz7_A 492 ------DTTATDIICPM-YARVDEDQPFPAVP-------KWSIKKWLSLPG-ETRPLILCEYAHAMGNS---LGGFAKY- 552 (1023)
T ss_dssp ------SSTTCSSBCCB-SCCSSCCBCCSSSC-------BCCHHHHHTSTT-CCCCEEEEEESCCCSSC---CTTHHHH-
T ss_pred ------CCccccEeecc-cCchhhcchhHHHH-------HHHhcccccccC-CCccEEEEEECCCCCCC---cccHHHH-
Confidence 12457888876 543210 000000 011000000112 57999999999754331 1122222
Q ss_pred HHHHHHHHHHHhcCCCcccceeeeeccCC
Q 014151 354 KTILDIVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
.+.+.+ .+...|.++|.|.|.+
T Consensus 553 ---~~~~~~----~p~~~G~fiW~~~D~~ 574 (1023)
T 1jz7_A 553 ---WQAFRQ----YPRLQGGFVWDWVDQS 574 (1023)
T ss_dssp ---HHHHHH----CTTEEEEEESCSBCCC
T ss_pred ---HHHHHh----CCccceeeeeeeeccc
Confidence 222322 3468999999999975
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=201.86 Aligned_cols=304 Identities=14% Similarity=0.151 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+ +. .|++++|.+ |..++..++.+|++|+.+.++||.++++|++ |+ .|
T Consensus 70 Yh~y~eDi~lm~~lG~~~yRf---sI-sWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------~P 137 (479)
T 1gnx_A 70 YHRWREDVALMAELGLGAYRF---SL-AWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYH-WD-------LP 137 (479)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE---EC-CHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhcCHHHHHHHHHcCCCEEEe---cc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------cc
Confidence 578999999999999999999 33 599999886 8999999999999999999999999999985 53 26
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....|+ |.+++..+.|.+|++.+++| |++ .|..|.++|||.+.. ..+
T Consensus 138 ~~L~~~GG---------w~~r~~v~~F~~ya~~~~~~--------~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~ 198 (479)
T 1gnx_A 138 QELENAGG---------WPERATAERFAEYAAIAADA--------LGD--RVKTWTTLNEPWCSAFLGYGSGVHAPGRTD 198 (479)
T ss_dssp HHHHHTTC---------TTSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred HHHHhcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--cceeEEEecCcchhhhhhhccCcCCCCccC
Confidence 77765442 77899999999999999999 998 588999999998521 011
Q ss_pred h-HHHH------HHHHHHHHHHHhcC-CCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc---
Q 014151 223 G-DTLQ------DWIDEMSAFVKSID-KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS--- 275 (430)
Q Consensus 223 ~-~~~~------~w~~~~~~~Ir~~d-p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~--- 275 (430)
. ..++ .-.....+++|+.+ |+..|.+-....+. .|.. .+|. .|.. ..|.
T Consensus 199 ~~~~~~a~h~lllAha~Av~~~r~~~~~~~~IGi~l~~~~~--~P~~--~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~ 274 (479)
T 1gnx_A 199 PVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHV--RPLT--DSDADADAVRRIDALANRVFTGPMLQGAYPE 274 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEEECCCE--EESS--SCHHHHHHHHHHHHHHTHHHHHHHHHSSCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeEEEeecCcee--eeCC--CCHHHHHHHHHHHHHHhHHHHHHHhCCCCCH
Confidence 1 1111 11245666788888 88665443221111 0100 0121 1110 0010
Q ss_pred -------------chh----hccCCCCcceEEeeecCCCCCC----------------Cc-----ch---------h-hh
Q 014151 276 -------------DFI----RNSNNDNIDFASVHIYPDHWFH----------------DL-----EF---------E-DD 307 (430)
Q Consensus 276 -------------df~----~~~~~~~iD~~s~H~Y~~~w~~----------------~~-----~~---------~-~~ 307 (430)
.|. ..+. ..+||+++++|...... .. .. + ..
T Consensus 275 ~~~~~~~~~~~~p~~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 353 (479)
T 1gnx_A 275 DLVKDTAGLTDWSFVRDGDLRLAH-QKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTA 353 (479)
T ss_dssp HHHHHTTTTCCCTTSCTTHHHHHC-CCCSCEEEECSCCEEEC----------------CCCSSTTCTTCCEECCSSCBCT
T ss_pred HHHHHHHhcCCCCCCCHHHHHHhc-CCCCEEEEecccCeEEecCCCccccccccccccccccccccccccccCCCCCcCC
Confidence 000 0012 35899999999653110 00 00 0 00
Q ss_pred HHH--HHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 308 LKF--VTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 308 ~~~--~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
..| ...-|+..+....+.+ ++||+|+|.|+..... ...+..|..|++.++..+.+++++|..+.|++.|++.
T Consensus 354 ~gW~i~P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~ 433 (479)
T 1gnx_A 354 MGWAVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLL 433 (479)
T ss_dssp TCCBCCHHHHHHHHHHHHHHCTTSCEEEEEECCCCCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSB
T ss_pred CCCccChHHHHHHHHHHHHhcCCCCEEEEcccCCcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEEEecCc
Confidence 000 0111333333333336 8999999999875431 2346899999999999999999999999999999999
Q ss_pred cCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhcccc
Q 014151 380 VEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
|+ .+|..||+ +++.|-.+..+..|+++..++.+-..
T Consensus 434 Dn--~eW~~Gy~~RfGli~VD~~~~~R~pK~S~~wy~~vi~~ 473 (479)
T 1gnx_A 434 DN--FEWAHGYSKRFGAVYVDYPTGTRIPKASARWYAEVART 473 (479)
T ss_dssp CC--CCGGGGGGCCCCSEEEETTTTEEEECHHHHHHHHHHHH
T ss_pred cc--cchhccccCCCCeEEecCCCCCeeeccHHHHHHHHHHh
Confidence 98 78876664 44332122236677777777766433
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-20 Score=200.10 Aligned_cols=307 Identities=16% Similarity=0.182 Sum_probs=184.2
Q ss_pred EeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 59 NGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 59 ~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+++|- . . ++++.++++|+.||++|+|+||+.+| .|..++|.||.|+ ++.||++|++|+++||+||+
T Consensus 2 ~G~~y~p-e-~----w~~~~~~~dl~~mk~~G~N~vR~~if---~W~~~eP~~g~~d---~~~ld~~ld~a~~~Gi~vil 69 (645)
T 1kwg_A 2 LGVCYYP-E-H----WPKERWKEDARRMREAGLSHVRIGEF---AWALLEPEPGRLE---WGWLDEAIATLAAEGLKVVL 69 (645)
T ss_dssp EEEECCG-G-G----SCHHHHHHHHHHHHHHTCCEEEECTT---CHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcCCc-c-c----CCHHHHHHHHHHHHHcCCCEEEEeee---chhhcCCCCCccC---hHHHHHHHHHHHHCCCEEEE
Confidence 4777542 1 1 25899999999999999999999665 3778899999998 56889999999999999999
Q ss_pred eccCCcccC-CCcchhhhhhhh--hCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecC
Q 014151 139 SLVNNLQAY-GGKTQYVNWAWE--EGIGI--SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN 213 (430)
Q Consensus 139 ~l~~~w~~~-gg~~~y~~W~~~--~G~~~--~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~N 213 (430)
.+... ... --...+|.|... .|... +......+++|.+++..+++++.+++| |++||+|++|++.|
T Consensus 70 ~~~~~-~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~r--------y~~~p~V~~w~i~N 140 (645)
T 1kwg_A 70 GTPTA-TPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAER--------YGGLEAVAGFQTDN 140 (645)
T ss_dssp ECSTT-SCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHH--------HTTCTTEEEEECSS
T ss_pred eCCCC-CCChhHhhcCCceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHH--------hCCCCcEEEEEecC
Confidence 87421 000 001123333311 12111 011223367899999999999999999 99999999999999
Q ss_pred CCCCCC---CCC---h-----------------------------------------------------------HHHHH
Q 014151 214 EPRCMS---DPS---G-----------------------------------------------------------DTLQD 228 (430)
Q Consensus 214 Ep~~~~---~~~---~-----------------------------------------------------------~~~~~ 228 (430)
||.+.. +.+ . +.+.+
T Consensus 141 E~~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~ 220 (645)
T 1kwg_A 141 EYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRA 220 (645)
T ss_dssp STTTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHHhcCHHHHHHHhCccccccccCcHhhcCCCCccCCCCChHHHHHHHHHHHHHHHH
Confidence 998631 101 1 12455
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCC--cchhh
Q 014151 229 WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD--LEFED 306 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~--~~~~~ 306 (430)
+++.+++.||+.+|+++|++...+.+. +.|... ..+.+|++++|.||..+... ...+.
T Consensus 221 ~~~~~~~~ir~~~p~~pvt~n~~~~~~------------------~~d~~~--~a~~lDv~~~d~Y~~~~~~~~~~~~~~ 280 (645)
T 1kwg_A 221 FNRLQVEILRAHAPGKFVTHNFMGFFT------------------DLDAFA--LAQDLDFASWDSYPLGFTDLMPLPPEE 280 (645)
T ss_dssp HHHHHHHHHHHHSTTCEEECEECTTCC------------------SSCHHH--HGGGSSSEEEEECHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhCCCCcEEEeECcCCC------------------CcCHHH--HHhcCcEEEECCCCccccccccccccc
Confidence 667788999999999999986533211 011111 13679999999998632110 00000
Q ss_pred hHHH-------HHHHHHHHHHhhhhcCCCcEEEEecCCCCCC-CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeee
Q 014151 307 DLKF-------VTKWMLSHIEDGDKELNKPVFFTEYGLSNLI-KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL 378 (430)
Q Consensus 307 ~~~~-------~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~ 378 (430)
..+| ...+..+..+. ..+||++|.||+....+ ..++...+...++.+. +++..+ +..|.++|+|
T Consensus 281 ~~~~~r~~~~~~~~~~~dl~r~---~~~kP~~i~E~~~~~~~w~~~~~~~~pg~~r~~~---~~~~a~--Ga~~~~~f~w 352 (645)
T 1kwg_A 281 KLRYARTGHPDVAAFHHDLYRG---VGRGRFWVMEQQPGPVNWAPHNPSPAPGMVRLWT---WEALAH--GAEVVSYFRW 352 (645)
T ss_dssp HHHTTTTCCTTHHHHHHHHHHH---HTTTCEEEEEECCSCCSSSSSCCCCCTTHHHHHH---HHHHHT--TCSCEEEECS
T ss_pred cccccccCchhHHHHHHHHHHh---hcCCCEEEecCCCCCCCCccCCCCCCccHHHHHH---HHHHhc--CCCEEEEeee
Confidence 0000 01111111111 13599999999865432 1111111222233222 223333 4688999999
Q ss_pred ccCCCc-cCCCCceEEcCCC-c-cHHHHHHHHHHHHhhcc
Q 014151 379 FVEGME-EYNDDFGIVPWER-T-STYKLLTEQSCGLGRIS 415 (430)
Q Consensus 379 ~~~~~~-~~~dg~~i~~~~~-~-~~~~~~~~~~~~~~~~~ 415 (430)
.+.... +. ..+++...++ + ...+-+++.++.++.++
T Consensus 353 ~~~~~~~E~-~~~g~l~~~g~~~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 353 RQAPFAQEQ-MHAGLHRPDSAPDQGFFEAKRVAEELAALA 391 (645)
T ss_dssp BCCSSSTTT-TSCCSBCTTSCBCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCccc-ccccccCCCCCcCHHHHHHHHHHHHHHhhc
Confidence 876321 11 1244444443 2 23355666667776664
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-21 Score=200.43 Aligned_cols=306 Identities=14% Similarity=0.207 Sum_probs=201.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 64 ~Yhry~eDi~Lm~elG~~~yRf---SI-sWsRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H-~d----l--- 131 (458)
T 3ta9_A 64 HYHLYREDIELMKEIGIRSYRF---ST-SWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYH-WD----L--- 131 (458)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C---
T ss_pred hHHhHHHHHHHHHHcCCCEEEe---cC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecC-CC----C---
Confidence 3678999999999999999999 33 599999986 8999999999999999999999999999986 64 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C--C
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D--P 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~--~ 221 (430)
|.|....|+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+.. . .
T Consensus 132 P~~L~~~GG---------W~nr~~v~~F~~YA~~~f~~--------fgd--rVk~W~T~NEP~~~~~~gy~~G~~~Pg~~ 192 (458)
T 3ta9_A 132 PQALQDKGG---------WTNRDTAKYFAEYARLMFEE--------FNG--LVDLWVTHNEPWVVAFEGHAFGNHAPGTK 192 (458)
T ss_dssp BHHHHTTTG---------GGSHHHHHHHHHHHHHHHHH--------TTT--TCCEEEEEECHHHHHHHHHTSCCSTTCCC
T ss_pred CHhHHhcCC---------CCCHHHHHHHHHHHHHHHHH--------hcC--cCCEEEEecCcchhhcccccccccCCCcC
Confidence 566654443 88999999999999999999 998 588899999997421 0 0
Q ss_pred Ch-HHHHH------HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc---
Q 014151 222 SG-DTLQD------WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS--- 275 (430)
Q Consensus 222 ~~-~~~~~------w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~--- 275 (430)
+. ..++. -.....+++|+..|+-.|.+-....+. .|.. .+|. .|.. ..|.
T Consensus 193 ~~~~~~~~~h~~llAha~Av~~~r~~~~~~~IG~~~~~~~~--~P~~--~~p~D~~aa~~~~~~~~~~f~dp~~~G~YP~ 268 (458)
T 3ta9_A 193 DFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPA--YPAG--DSEKDVKAASLLDDYINAWFLSPVFKGSYPE 268 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEECCCE--EESS--SCHHHHHHHHHHHHHHTHHHHHHHHTSSCCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCCce--ecCC--CCHHHHHHHHHHHHHhhchhhhhhhCCCCCH
Confidence 11 11111 123455678888888766543321111 0100 0121 1110 0110
Q ss_pred -------------chh----hccCCCCcceEEeeecCCCCCC--------C------cchh-hhHHH--HHHHHHHHHHh
Q 014151 276 -------------DFI----RNSNNDNIDFASVHIYPDHWFH--------D------LEFE-DDLKF--VTKWMLSHIED 321 (430)
Q Consensus 276 -------------df~----~~~~~~~iD~~s~H~Y~~~w~~--------~------~~~~-~~~~~--~~~~l~~~~~~ 321 (430)
.|. ..+ ...+||+++++|...... . ...+ ....| ...-|+..+..
T Consensus 269 ~~~~~~~~~~~~p~~~~~d~~~i-~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~ 347 (458)
T 3ta9_A 269 ELHHIYEQNLGAFTTQPGDMDII-SRDIDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVR 347 (458)
T ss_dssp HHHHHHHHHSCCCCCCTTHHHHH-TCCCSEEEEECCCCEEEEECCCSSSSCEEECCCC-CCBCTTCCBCCTHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCHHHHHHh-CCCCCEEEEECCcCeEEecCCCCCCCCCccccCCCCCcCCCCCeecHHHHHHHHHH
Confidence 000 001 135799999999643110 0 0000 00000 01113333333
Q ss_pred hhhcCC-CcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----
Q 014151 322 GDKELN-KPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG---- 391 (430)
Q Consensus 322 a~~~~g-kPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~---- 391 (430)
..+.++ +||+|+|.|+..... ...+..|.+|++.++.++.+++++|..+.|++.|++.|+ .+|..||+
T Consensus 348 ~~~rY~~~Pi~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~Gy~~RfG 425 (458)
T 3ta9_A 348 VNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDN--FEWAYGYSKRFG 425 (458)
T ss_dssp HHHHTCCSCEEEEEECCCBCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHSSCCEEEEEEECSBCC--CBGGGBTTSBCC
T ss_pred HHHHcCCCCEEEecCCCCcCCccccCCCcCCHHHHHHHHHHHHHHHHHHHcCCeEEEEEeeecccc--cchhhcccCcCC
Confidence 322365 899999999975431 234689999999999999999999999999999999998 78876665
Q ss_pred EEcCCCcc-HHHHHHHHHHHHhhccccc
Q 014151 392 IVPWERTS-TYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 392 i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 418 (430)
+++.|-.+ ..+..|+++..++.+-..|
T Consensus 426 lv~VD~~t~~~R~~K~S~~wy~~vi~~n 453 (458)
T 3ta9_A 426 LIYVDYENGNRRFLKDSALWYREVIEKG 453 (458)
T ss_dssp SEEEETTTTCEEEECHHHHHHHHHHHTS
T ss_pred eEEeCCCCCccceeccHHHHHHHHHHhc
Confidence 33332122 3366777887777765444
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=203.18 Aligned_cols=305 Identities=14% Similarity=0.189 Sum_probs=201.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+ +. +|++++|. +|.+|++.++.+|++|+.+.++||+++++|++ |+ .
T Consensus 52 ~Yh~y~eDi~lm~~~G~~~~R~---si-sWsRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~ 119 (468)
T 1pbg_A 52 FYHKYPVDLELAEEYGVNGIRI---SI-AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FD-------T 119 (468)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------C
T ss_pred ccccCHHHHHHHHHhCCCEEEe---cc-CHhhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------c
Confidence 3578999999999999999999 33 59999998 58999999999999999999999999999985 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CC
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DP 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |++ |..|.+.|||.+.. ..
T Consensus 120 P~~L~~~gg---------w~~r~~~~~F~~ya~~~~~~--------~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~ 179 (468)
T 1pbg_A 120 PEALHSNGD---------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIK 179 (468)
T ss_dssp BHHHHHTTG---------GGSTHHHHHHHHHHHHHHHH--------CTT---CCEEEEESCHHHHHHHHHTSCCSTTCCC
T ss_pred CHHHHhcCC---------CCChHHHHHHHHHHHHHHHH--------hCC---CCEEEEecCchhhhcccccccccCCccc
Confidence 567655442 67889999999999999999 998 88999999998521 00
Q ss_pred -C-hHHHH------HHHHHHHHHHHhcCCCCEEEEccCCccCCCCC-CCcccCcc-------------chhh---ccCc-
Q 014151 222 -S-GDTLQ------DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP-KRLTVNPE-------------MWAS---ALGS- 275 (430)
Q Consensus 222 -~-~~~~~------~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~-~~~~~np~-------------~w~~---~~g~- 275 (430)
+ ...++ .-.....+++|+.+|+..|.+-....+.. | .. .+|. .|.. ..|.
T Consensus 180 ~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~l~~~~~~--P~~~--~~p~D~~aa~~~~~~~~~~f~dp~~~G~Y 255 (468)
T 1pbg_A 180 YDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKY--PYDP--ENPADVRAAELEDIIHNKFILDATYLGHY 255 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCCEE--ESST--TCHHHHHHHHHHHHHHTHHHHHHHHTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcccc--cCCC--CCHHHHHHHHHHHHHHHhhhhhHhhCCCC
Confidence 1 11111 11245667789999987664432221111 1 00 0121 1100 0110
Q ss_pred -----c--------------hhh----ccCCCC--cceEEeeecCCCCCC-----Cc------c--------hh------
Q 014151 276 -----D--------------FIR----NSNNDN--IDFASVHIYPDHWFH-----DL------E--------FE------ 305 (430)
Q Consensus 276 -----d--------------f~~----~~~~~~--iD~~s~H~Y~~~w~~-----~~------~--------~~------ 305 (430)
+ |.. .+..+. +||+++++|...... .. . ..
T Consensus 256 P~~~~~~~~~~~~~p~~~~~~~~~d~~~i~~~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
T 1pbg_A 256 SDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRV 335 (468)
T ss_dssp CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHTTCCCEEEEECSCCEEEECCCCCCBC-----------CCEETTTEEEC
T ss_pred CHHHHHHHHhcccCcccccCCCHHHHHHHhCCCCCCCEEEEecccCeEeecccCccccccCCCccccccccccccccccc
Confidence 0 000 001122 699999999753110 00 0 00
Q ss_pred -------hhHHH--HHHHHHHHHHhhhhcC--CCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 306 -------DDLKF--VTKWMLSHIEDGDKEL--NKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 306 -------~~~~~--~~~~l~~~~~~a~~~~--gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
....| ...-|+..+....+.+ ++||+|+|.|+.... ....+..|.+|++.++.++.++++++..+
T Consensus 336 ~~~~~~~t~~gW~i~P~Gl~~~L~~~~~rY~~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v 415 (468)
T 1pbg_A 336 APDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGANV 415 (468)
T ss_dssp CCTTCC-----CCCCTHHHHHHHHHHHHHCTTCCCEEEEECCCCBCCCEETTEECCHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCCEEEEeCCCCCcCcccCCCcCcHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 00000 0112334444333336 899999999997642 11246899999999999999999999999
Q ss_pred ccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhcccc
Q 014151 371 AGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 371 ~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
.|++.|++.|+ .+|..||+ +++.|-.+..+..|+++..++.+-..
T Consensus 416 ~GY~~WSl~Dn--~eW~~Gy~~RfGl~~VD~~t~~R~~K~S~~wy~~vi~~ 464 (468)
T 1pbg_A 416 KGYFIWSLMDV--FSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAET 464 (468)
T ss_dssp EEEEEECSBCC--CBTTTBTTSBCCSEEEETTTTEEEECHHHHHHHHHHHH
T ss_pred EEEEEeccccc--cchhcCCCCCcceEEEeCCCCCeeeccHHHHHHHHHHh
Confidence 99999999998 78877765 34332122336677777777766433
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=199.60 Aligned_cols=303 Identities=13% Similarity=0.144 Sum_probs=199.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|++|+ +. +|++++|. +|.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 53 ~Yhry~eDi~lm~~lG~~~~Rf---si-~W~Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H-~d------- 120 (479)
T 4b3l_A 53 AYHQIESDLTLLASLGHNSYRT---SI-QWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHH-FD------- 120 (479)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEE---EC-CHHHHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCS-SC-------
T ss_pred hHHHHHHHHHHHHHcCCCEEEe---ec-CHHHhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecC-CC-------
Confidence 3678999999999999999999 33 59999998 78999999999999999999999999999986 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------CC-
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------DP- 221 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~~- 221 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+.. .+
T Consensus 121 lP~~L~~~yGG---------W~nr~~vd~F~~YA~~~f~~--------fgd--rVk~WiT~NEp~~~~~~gy~~G~~~Pg 181 (479)
T 4b3l_A 121 LPIALYQAYGG---------WESKHVVDLFVAFSKVCFEQ--------FGD--RVKDWFVHNEPMVVVEGSYLMQFHYPA 181 (479)
T ss_dssp CBHHHHHHHCG---------GGCHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSSSSTTC
T ss_pred cCHHHHHhcCC---------cCCHHHHHHHHHHHHHHHHH--------hCc--cCCeEEEccCcchhhhccccccccCCC
Confidence 25677654 54 88999999999999999999 998 588899999998421 01
Q ss_pred --Ch-HHHHH------HHHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-------------chhh---cc
Q 014151 222 --SG-DTLQD------WIDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---AL 273 (430)
Q Consensus 222 --~~-~~~~~------w~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~ 273 (430)
+. ..++. -..+..+.+|+.. |+-.|.+-....+. .|.. .+|. .|.. ..
T Consensus 182 ~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~--~P~~--~~~~D~~Aa~~~~~~~~~~f~dp~~~ 257 (479)
T 4b3l_A 182 IVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPA--YPAS--QSEADMAAAHFAELWNNDLFMEAAVH 257 (479)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSSSEEEEEECCCCE--EESS--SSHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCcee--ecCC--CCHHHHHHHHHHHHHhhhhHHHHHhC
Confidence 11 11111 1235556788888 87766543322111 0100 0121 1110 01
Q ss_pred Cc----------------chh----hccCCCCcceEEeeecCCCCC---CC-c------------------ch-hhhH-H
Q 014151 274 GS----------------DFI----RNSNNDNIDFASVHIYPDHWF---HD-L------------------EF-EDDL-K 309 (430)
Q Consensus 274 g~----------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~-~------------------~~-~~~~-~ 309 (430)
|. .|. ..+..+.+||+++++|..... .. . .. .... .
T Consensus 258 G~YP~~~~~~~~~~~~~p~~~~~d~~~ik~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~t~~~g 337 (479)
T 4b3l_A 258 GKFPEELVAVLKKDGVLWQSTPEELALIAENRVDYLGLNFYHPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKG 337 (479)
T ss_dssp SSCCHHHHHHHHHTTCCCCCCHHHHHHHHHCCCSEEEEECSSCEEEECCSCCCSCCSSCCGGGSCEECCCTTCCEEGGGT
T ss_pred CCCCHHHHHHHHhcCCCCCCCHHHHHHhhCCCCCEEEEECCcCcEeecCCCCcccCCCcccccccccccCCCCCcCCCCC
Confidence 10 000 001123489999999964210 00 0 00 0000 1
Q ss_pred H--HHHHHHHHHHhhhhcC-CCcEEEEecCCCCCC--------CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeee
Q 014151 310 F--VTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLI--------KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL 378 (430)
Q Consensus 310 ~--~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~--------~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~ 378 (430)
| ...-|+..+....+.+ ++||+|+|.|+.... ....+..|..|++.++.++.++++++..+.|++.|++
T Consensus 338 W~i~P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~~~~g~i~D~~Ri~yl~~hl~~v~~Ai~dGv~v~GY~~WSl 417 (479)
T 4b3l_A 338 WEIYPEAVYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIEAGSNCFGYHVWTP 417 (479)
T ss_dssp EECCTHHHHHHHHHHHHHSTTCCEEEEEECCCBSCGGGGBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEESCS
T ss_pred CeechHHHHHHHHHHHHhcCCCCEEEEeCCCCCCCccccccccCCcCCHHHHHHHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 1 0111344444333336 899999999997432 1234679999999999999999999999999999999
Q ss_pred ccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhc
Q 014151 379 FVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 379 ~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
.|+ .+|..||+ +++.|-.+..+..|+++..++.+
T Consensus 418 ~Dn--feW~~Gy~~RfGlv~VD~~~~~R~pK~S~~wy~~v 455 (479)
T 4b3l_A 418 IDG--WSWLNAYKNRYGLVENNIHTQVRRPKASAYWFKKV 455 (479)
T ss_dssp BCC--CCGGGTTSSBCCSEEECTTTCCEEECHHHHHHHHH
T ss_pred ccc--chhhhcccCCCCeEEEcCCCCCeeeccHHHHHHHH
Confidence 998 78877765 33332111225566666666655
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=99.86 E-value=9.2e-21 Score=194.46 Aligned_cols=306 Identities=13% Similarity=0.159 Sum_probs=201.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC--CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP--GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p--g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|++|+ +. +|++++|.. |..|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 72 ~Yhry~eDi~Lm~elG~~~yRf---SI-sWsRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~D----l-- 140 (481)
T 3qom_A 72 FYHRYPEDIELFAEMGFKCFRT---SI-AWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAH-FE----M-- 140 (481)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C--
T ss_pred HHHHHHHHHHHHHHcCCCEEEe---cC-cHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEcc-CC----C--
Confidence 3678999999999999999998 43 599999875 6899999999999999999999999999986 64 2
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC-----------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----------- 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----------- 220 (430)
|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+...
T Consensus 141 -P~~L~~~yGG---------W~nr~~v~~F~~YA~~~f~~--------fgd--rVk~W~T~NEp~~~~~~g~~~~~y~~~ 200 (481)
T 3qom_A 141 -PYHLVKQYGG---------WRNRKLIQFYLNFAKVCFER--------YRD--KVTYWMTFNEINNQTNFESDGAMLTDS 200 (481)
T ss_dssp -BHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------TTT--TCCEEEEETTGGGGGSTTCHHHHHHHH
T ss_pred -CHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--cCCEEEEccCccHHhhcCccccccccc
Confidence 5666543 43 78999999999999999999 987 6889999999985210
Q ss_pred ----CC--h---HHHHHH------HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccc------------hhh--
Q 014151 221 ----PS--G---DTLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEM------------WAS-- 271 (430)
Q Consensus 221 ----~~--~---~~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~------------w~~-- 271 (430)
+. . ..++.- .....+.+|+..|+..|.+-....+. .|.. .+|.+ |..
T Consensus 201 G~~~p~~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~--~P~~--~~~~D~~aa~~~~~~~~~f~d~ 276 (481)
T 3qom_A 201 GIIHQPGENRERWMYQAAHYELVASAAAVQLGHQINPDFQIGCMIAMCPI--YPLT--AAPADVLFAQRAMQTRFYFADV 276 (481)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECCCE--EESS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHhCcccceeEEeeccee--ecCC--CCHHHHHHHHHHHHHhhHHHHH
Confidence 00 0 111111 23455677888888766443221110 0100 01110 110
Q ss_pred -ccCc----------------chh----hccCCCCcceEEeeecCCCCCCC---------------cchh-hhHHH--HH
Q 014151 272 -ALGS----------------DFI----RNSNNDNIDFASVHIYPDHWFHD---------------LEFE-DDLKF--VT 312 (430)
Q Consensus 272 -~~g~----------------df~----~~~~~~~iD~~s~H~Y~~~w~~~---------------~~~~-~~~~~--~~ 312 (430)
..|. .|. ..+....+||+++++|....... ...+ ....| ..
T Consensus 277 ~~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~p~~~~t~~gw~i~P 356 (481)
T 3qom_A 277 HCNGTYPQWLRNRFESEHFNLDITAEDLKILQAGTVDYIGFSYYMSFTVKDTGKLAYNEEHDLVKNPYVKASDWGWQVDP 356 (481)
T ss_dssp HHHSSCCHHHHHHHHHTTCCCCCCHHHHHHHHHCCCSEEEEEESCCEEECCCSSSCCCTTTSEECCTTSCBCTTSCBCCS
T ss_pred HhCCCCCHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEeCCcCeEeecCCCCCCCccccccCCCCCCcCCCcceecc
Confidence 0110 000 00011468999999997431100 0000 00000 01
Q ss_pred HHHHHHHHhhhhcCCCcEEEEecCCCCCC-----CCCChhHHHHHHHHHHHHHHHHH-hcCCCcccceeeeeccCCCccC
Q 014151 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLI-----KGFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 313 ~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W~~~~~~~~~~ 386 (430)
.-|+..+....+.+++||+|+|.|+.... ....+..|..|++.++.++.+++ +++..+.|++.|++.|+ .+|
T Consensus 357 ~Gl~~~L~~i~~rY~~Pi~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn--feW 434 (481)
T 3qom_A 357 VGLRYAMNWFTDRYHLPLFIVENGLGAIDKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGVDLIGYTPWGCIDL--VAA 434 (481)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCCBCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCCEEEECCBTSBCC--CCT
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCcCcCCCcCCHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeecccc--ccc
Confidence 11333333333337899999999997532 12346799999999999999999 88999999999999998 788
Q ss_pred CCC-ce----EEcCC-C-c---cHHHHHHHHHHHHhhcccc
Q 014151 387 NDD-FG----IVPWE-R-T---STYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 387 ~dg-~~----i~~~~-~-~---~~~~~~~~~~~~~~~~~~~ 417 (430)
..| |+ +++.| + + +..+..|+++..++.+-..
T Consensus 435 ~~Gey~~RfGlv~VD~~~~~~~t~~R~~K~S~~wy~~vi~~ 475 (481)
T 3qom_A 435 STGQMSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVIAT 475 (481)
T ss_dssp TTCCSSSBCCSEEECCCTTSCSCCCEEECHHHHHHHHHHHT
T ss_pred ccCcccCccceEEecCCCCCCcccceeeccHHHHHHHHHHh
Confidence 888 65 43322 1 1 3347788888888777443
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=198.16 Aligned_cols=304 Identities=13% Similarity=0.162 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+ +. .|+.++|.+ |.+|++.++.+|++|+.+.++||.++++|++ |+ .|
T Consensus 57 Yhry~eDi~l~~~lG~~~~R~---si-~W~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------lP 124 (444)
T 4hz8_A 57 YHRYEQDLDLMRQLGLKTYRF---SI-AWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYH-WD-------LP 124 (444)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhHHHHHHHHHhcCCCEEEE---ec-cHHHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------CC
Confidence 578999999999999999999 33 599999886 8999999999999999999999999999986 53 25
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....|+ |.+++..+.|.+|.+.+++| |++ .|-.|.++|||.+.. ..+
T Consensus 125 ~~L~~~GG---------W~nr~~v~~F~~Ya~~~~~~--------~gd--rVk~W~T~NEp~~~~~~gy~~g~~~Pg~~~ 185 (444)
T 4hz8_A 125 QWVEDEGG---------WLSRESASRFAEYTHALVAA--------LGD--QIPLWVTHNEPMVTVWAGYHMGLFAPGLKD 185 (444)
T ss_dssp HHHHHTTG---------GGSTHHHHHHHHHHHHHHHH--------HGG--GCSEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred HHHhhCcC---------CCChHHHHHHHHHHHHHHHH--------hCc--cCCeEEEccCcchhhhccccccccccccCC
Confidence 67765443 78899999999999999999 998 588899999998521 001
Q ss_pred -hHHHHH------HHHHHHHHHHhcCCC-CEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc---
Q 014151 223 -GDTLQD------WIDEMSAFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS--- 275 (430)
Q Consensus 223 -~~~~~~------w~~~~~~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~--- 275 (430)
...++. -.....+++|+..|+ ..|.+-....+. .|.. .+|. .|.. ..|.
T Consensus 186 ~~~~~~~~h~~llAha~Av~~~r~~~~~~~~iG~~~~~~~~--~P~~--~~p~D~~aa~~~~~~~~~~f~dp~~~G~YP~ 261 (444)
T 4hz8_A 186 PTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTI--YPVS--AEPADVEAARRMHSFQNELFLEPLIRGQYNQ 261 (444)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEEECCE--EESS--SCHHHHHHHHHHHHHHHHTTHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEecCcce--eeCC--CCHHHHHHHHHHHHHHhHHHHHHHhCCCCCH
Confidence 111221 123556678888888 555433211110 0100 0121 0100 0010
Q ss_pred -----------chh----hccCCCCcceEEeeecCCCCC-----CC------cchh-hhHHH--HHHHHHHHHHhhhhcC
Q 014151 276 -----------DFI----RNSNNDNIDFASVHIYPDHWF-----HD------LEFE-DDLKF--VTKWMLSHIEDGDKEL 326 (430)
Q Consensus 276 -----------df~----~~~~~~~iD~~s~H~Y~~~w~-----~~------~~~~-~~~~~--~~~~l~~~~~~a~~~~ 326 (430)
.|. ..+. ..+||+++++|..... +. ...+ ....| ...-|+..+....+.+
T Consensus 262 ~~~~~~~~~~p~~~~~d~~~i~-~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~~~L~~~~~rY 340 (444)
T 4hz8_A 262 ATLMAYPNLPEFIAPEDMQTIS-APIDFLGVNYYNPMRVKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTY 340 (444)
T ss_dssp HHHHHCTTGGGGCCTTHHHHHT-SCCSEEEEEESCCEEEEECSSTTSEEEECCCSSBCTTCCBCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHhc-CCCCEEEEECCcCceeccCCCCCcccccCCCCCCCCCccccChHHHHHHHHHHHHHc
Confidence 000 0011 2489999999964210 00 0000 00000 1111333333332235
Q ss_pred C-CcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCC
Q 014151 327 N-KPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWE 396 (430)
Q Consensus 327 g-kPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~ 396 (430)
+ +||+|+|.|+..... ...+..|.+|++.++.++.++++++..+.|++.|++.|+ .+|..||+ +++.|
T Consensus 341 ~~~Pi~ItENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn--~eW~~Gy~~RfGlv~VD 418 (444)
T 4hz8_A 341 GKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDN--FEWAEGYSKRFGIIYVD 418 (444)
T ss_dssp CSCCEEEEEECCCCCCCCCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGCCCCSEEEC
T ss_pred CCCCEEEecCCCCcCCCcCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEecCccc--cchhhcccCcCCeEEEc
Confidence 5 699999999975431 234689999999999999999999999999999999998 78876665 44433
Q ss_pred CccHHHHHHHHHHHHhhcccc
Q 014151 397 RTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~ 417 (430)
-.+..+..|+++..++.+-..
T Consensus 419 ~~t~~R~~K~S~~wy~~vi~~ 439 (444)
T 4hz8_A 419 FETQQRTLKQSAQWYRDVIAN 439 (444)
T ss_dssp TTTCCEEEBHHHHHHHHHHHH
T ss_pred CCCCCeeeccHHHHHHHHHHh
Confidence 222336677777777766433
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=198.39 Aligned_cols=303 Identities=14% Similarity=0.182 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
..++++|++.|+++|+|++|+ +. .|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 77 Y~~~~eDi~lm~~~G~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 144 (512)
T 1v08_A 77 YHMYKTDVRLLKEMGMDAYRF---SI-SWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFH-WD------- 144 (512)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE---EC-CHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEec---cc-CHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------
Confidence 568999999999999999999 33 599999988 9999999999999999999999999999985 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCH---HHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDP---SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS--------- 219 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~---~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~--------- 219 (430)
.|.|.... |+ |.++ ...+.|.+|.+.+++| |+++ |..|.+.|||.+..
T Consensus 145 ~P~~L~~~ygg---------w~~r~~c~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~ 205 (512)
T 1v08_A 145 VPQALEEKYGG---------FLDKSHKSIVEDYTYFAKVCFDN--------FGDK--VKNWLTFNDPQTFTSFSYGTGVF 205 (512)
T ss_dssp CBHHHHHHHCG---------GGCTTSSHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCS
T ss_pred CCHHHHhhCCC---------CCCccccchHHHHHHHHHHHHHH--------hCCc--ceEEEEcccchhhhhcccccccc
Confidence 25666543 32 6677 8999999999999999 9986 99999999997421
Q ss_pred -C--CC-------------hHHHHHH------HHHHHHHHHhc--CCCCEEEEccCCccCCCCCCCcccCcc--------
Q 014151 220 -D--PS-------------GDTLQDW------IDEMSAFVKSI--DKKHLVTVGLEGFYGPKSPKRLTVNPE-------- 267 (430)
Q Consensus 220 -~--~~-------------~~~~~~w------~~~~~~~Ir~~--dp~~lV~~G~~g~~~~~~~~~~~~np~-------- 267 (430)
. .+ ...++.- .....+.+|+. +|+-.|.+-....+. .|.. -+|.
T Consensus 206 ~Pg~~~~~~~~~c~~g~~~~~~~~a~H~~llAHa~Av~~~r~~~~~~~g~IGi~l~~~~~--~P~~--~~~~D~~Aa~~~ 281 (512)
T 1v08_A 206 APGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDTRIGLAFDVMGR--VPYG--TSFLDKQAEERS 281 (512)
T ss_dssp TTCBCCTTSSSSBTTSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEEEECCEE--EESS--SSHHHHHHHHHH
T ss_pred CCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCee--ecCC--CCHHHHHHHHHH
Confidence 0 00 1122211 23445567776 677655443221111 0100 0111
Q ss_pred -----chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---------CCcch--------
Q 014151 268 -----MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---------HDLEF-------- 304 (430)
Q Consensus 268 -----~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---------~~~~~-------- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... .....
T Consensus 282 ~~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-g~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~ 360 (512)
T 1v08_A 282 WDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLA-GSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQ 360 (512)
T ss_dssp HHHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSCEEEECCCEEEEEECCCCTTCCCSSGGGGGCEEE
T ss_pred HHHHhHhhhhHhhCCcCCHHHHHhhHhcCCCCCHHHHHHhC-CCCCEEEEecccCcEeecCCccccCCCccccccccccc
Confidence 0110 0110 000 0012 3589999999974210 00000
Q ss_pred -----------h-hhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC---------CChhHHHHHHHHHHHH
Q 014151 305 -----------E-DDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG---------FEPSLRDKLYKTILDI 359 (430)
Q Consensus 305 -----------~-~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~---------~~~~~r~~~~~~~~~~ 359 (430)
+ ....| ...-|+..+....+.+++| |+|+|.|+...... ..+..|..|++.++..
T Consensus 361 ~~~~~~~~p~~~~t~~gW~~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~~~g~v~D~~Ri~Yl~~hl~~ 440 (512)
T 1v08_A 361 EVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIAT 440 (512)
T ss_dssp ESBCTTSCBSSCBCSSSSCBCCTHHHHHHHHHHHHTSCCCCEEEEECCCCEECCSSSCCCHHHHHCCHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCcCCCCCcccCcHHHHHHHHHHHHHcCCCcEEEEecCCCcccccccccccccccCCHHHHHHHHHHHHH
Confidence 0 00011 1122344444444347776 99999999764321 1367999999999999
Q ss_pred HHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhccc
Q 014151 360 VYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRISR 416 (430)
Q Consensus 360 ~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~~~ 416 (430)
+.++++++..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+-.
T Consensus 441 ~~~Ai~dGv~V~GY~~WSliDn--feW~~Gy~~RfGliyVD~~~~~~R~~K~S~~wy~~vi~ 500 (512)
T 1v08_A 441 LKESIDLGSNVQGYFAWSLLDN--FEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNT 500 (512)
T ss_dssp HHHHHHTTCCEEEEEEECSBCC--CCGGGTTSEECCSEEEETTTTSEEEECHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECcCccc--cchhcccCccCCeEEecCCCCcceeechHHHHHHHHHh
Confidence 9999999999999999999998 77888876 33322111 23667777777776644
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-21 Score=199.08 Aligned_cols=303 Identities=14% Similarity=0.185 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
..++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|.+ |+
T Consensus 61 Y~~y~eDi~lm~~~G~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------- 128 (465)
T 2e3z_A 61 YNRWREDVQLLKSYGVKAYRF---SL-SWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYH-WD------- 128 (465)
T ss_dssp TTTHHHHHHHHHHTTCSEEEE---EC-CHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------
T ss_pred HHHhHHHHHHHHHhCCCceec---cc-chHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc-------
Confidence 567999999999999999999 43 699999987 8999999999999999999999999999975 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~ 220 (430)
.|.|.... |+ |.+ ++..+.|.+|.+.+++| |+++ |..|.+.|||.+.. .
T Consensus 129 ~P~~L~~~ygg---------w~~~~~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~P 189 (465)
T 2e3z_A 129 LPQALDDRYGG---------WLNKEEAIQDFTNYAKLCFES--------FGDL--VQNWITFNEPWVISVMGYGNGIFAP 189 (465)
T ss_dssp CBHHHHHHHCG---------GGSHHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTBCSSTT
T ss_pred CCHHHHhhcCC---------CCCCcchHHHHHHHHHHHHHH--------hCCC--ceEEEEccCchHhhhhhhhcCccCc
Confidence 25676553 43 678 99999999999999999 9986 89999999998521 0
Q ss_pred --C-ChHHHHHH------HHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---c
Q 014151 221 --P-SGDTLQDW------IDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---A 272 (430)
Q Consensus 221 --~-~~~~~~~w------~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~ 272 (430)
. ....++.- .....+.+|+. +|+-.|.+-....+. .|.. .+|. .|.. .
T Consensus 190 g~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~--~P~~--~~~~D~~aa~~~~~~~~~~f~dp~~ 265 (465)
T 2e3z_A 190 GHVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWL--IPYD--DTDASKEATLRAMEFKLGRFANPIY 265 (465)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SSHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEecCCee--ecCC--CCHHHHHHHHHHHHHHHHhhhhhee
Confidence 0 11222221 23445566775 566555432211110 0100 0121 0110 0
Q ss_pred cCc--------------chh----hccCCCCcceEEeeecCCCCCC-C-----------------cc---hhhhHHH---
Q 014151 273 LGS--------------DFI----RNSNNDNIDFASVHIYPDHWFH-D-----------------LE---FEDDLKF--- 310 (430)
Q Consensus 273 ~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~~-~-----------------~~---~~~~~~~--- 310 (430)
.|. .|. ..+. ..+||+++++|...... . .. ......|
T Consensus 266 ~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~~t~~gW~~i 344 (465)
T 2e3z_A 266 KGEYPPRIKKILGDRLPEFTPEEIELVK-GSSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQT 344 (465)
T ss_dssp HSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSSEEEECCCEEEEEECCCCGGGTSEEEESBCTTSCBSSCBBSSTTCBC
T ss_pred cccCCHHHHHHHHhhCCCCCHHHHHHhC-CCCCEEEEeeccceEEecCCCCCCCcccccccccccCCCCCCCCCCCCCcc
Confidence 110 010 0122 35899999999743110 0 00 0000111
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHH-hcCCCcccceeeeeccCC
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W~~~~~~ 382 (430)
...-|+..+....+.+++||+|+|.|+..... ...+..|..|++.++..+.+++ ++|..+.|++.|++.|+
T Consensus 345 ~P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn- 423 (465)
T 2e3z_A 345 YGPGFRWLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDGADVRGYFGWSLLDN- 423 (465)
T ss_dssp CHHHHHHHHHHHHHHHCSCEEEEEECCCBTTGGGSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSSCC-
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCCCccCccccccccCcCCHHHHHHHHHHHHHHHHHHHhcCCcEEEEEecccccc-
Confidence 11224444444433488999999999986431 1246799999999999999999 88999999999999998
Q ss_pred CccCCCCce----EEcCCCccHHHHHHHHHHHHhhccc
Q 014151 383 MEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISR 416 (430)
Q Consensus 383 ~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~ 416 (430)
.+|..||+ +++.|-.+..+..|+++..++.+-.
T Consensus 424 -~eW~~gy~~RfGli~VD~~~~~R~~K~S~~wy~~vi~ 460 (465)
T 2e3z_A 424 -FEWAEGYKVRFGVTHVDYETQKRTPKKSAEFLSRWFK 460 (465)
T ss_dssp -CCGGGTTSSCCCSEEEETTTTEEEECHHHHHHHHHHH
T ss_pred -cchhcCcCCCCCeEEecCCCCceeeccHHHHHHHHHH
Confidence 67877765 3333212233666777777766543
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-21 Score=196.71 Aligned_cols=303 Identities=15% Similarity=0.244 Sum_probs=197.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC--CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP--GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p--g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|.+ |+ .
T Consensus 57 ~Y~~~~eDi~lm~~~G~~~~R~---si-sWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H-~d----~-- 125 (464)
T 1wcg_A 57 SYHKYKEDVAIIKDLNLKFYRF---SI-SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH-WD----L-- 125 (464)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C--
T ss_pred hHHhhHHHHHHHHHhCCCeEEe---cc-cHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC----C--
Confidence 3678999999999999999999 33 599999988 9999999999999999999999999999985 53 2
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------C--C
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------D--P 221 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~--~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+.. . .
T Consensus 126 -P~~L~~~gg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~gy~~G~~~Pg~~ 185 (464)
T 1wcg_A 126 -PQYLQDLGG---------WVNPIMSDYFKEYARVLFTY--------FGDR--VKWWITFNEPIAVCKGYSIKAYAPNLN 185 (464)
T ss_dssp -BHHHHHTTG---------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHSSSSTTCCC
T ss_pred -CcchhhcCC---------CCChhHHHHHHHHHHHHHHH--------hCCc--CcEEEEccccchhhcccccCccCCCcc
Confidence 566654332 67888999999999999999 9986 89999999997521 0 1
Q ss_pred C--hHHHHHH------HHHHHHHHHhc---CCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccC
Q 014151 222 S--GDTLQDW------IDEMSAFVKSI---DKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALG 274 (430)
Q Consensus 222 ~--~~~~~~w------~~~~~~~Ir~~---dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g 274 (430)
+ ...++.- .....+.+|+. +|+-.|.+-....+.. |.. ..+|. .|.. ..|
T Consensus 186 ~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~--P~~-~~~~~D~~aa~~~~~~~~~~f~dp~~~G 262 (464)
T 1wcg_A 186 LKTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFM--PKN-AESDDDIETAERANQFERGWFGHPVYKG 262 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEECCCEEE--ESS-TTCHHHHHHHHHHHHHHTHHHHHHHHTS
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEeeCCeee--eCC-CCCHHHHHHHHHHHHHHhHHhhhhhhCC
Confidence 1 1111111 23445566775 5665554432211110 100 00111 0110 001
Q ss_pred c------------------------ch----hhccCCCCcceEEeeecCCCCCC-------C----------cch--h-h
Q 014151 275 S------------------------DF----IRNSNNDNIDFASVHIYPDHWFH-------D----------LEF--E-D 306 (430)
Q Consensus 275 ~------------------------df----~~~~~~~~iD~~s~H~Y~~~w~~-------~----------~~~--~-~ 306 (430)
. .| ...+. ..+||+++++|...... . ... + .
T Consensus 263 ~YP~~~~~~~~~~s~~~G~~~~~~p~~~~~d~~~i~-~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~t 341 (464)
T 1wcg_A 263 DYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLK-GTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLKP 341 (464)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHT-TCCSSEEEECCCEEEEEESCCSSTTSCGGGCEEEECCGGGCCS
T ss_pred CCCHHHHHHHHhhhhhcccccccCCCCCHHHHHHhc-CCCCEEEEcCccCeEeecCCCCcccccCCcCccccCCCCCCcc
Confidence 0 00 00012 35899999999742110 0 000 0 0
Q ss_pred -hHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-cCCCcccceeeeecc
Q 014151 307 -DLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAK-RKRSGAGALIWQLFV 380 (430)
Q Consensus 307 -~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~G~~~W~~~~ 380 (430)
...| ...-|+..+....+.+++| |+|+|.|+... ....+..|..|++.++.++.++++ ++..+.|++.|++.|
T Consensus 342 ~~~gW~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~-g~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~D 420 (464)
T 1wcg_A 342 NETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDD-GQLDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLLD 420 (464)
T ss_dssp SCCCSSCCCHHHHHHHHHHHHHHHTSCCEEEEEECCCBS-CCSSCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECSBC
T ss_pred cCCCCcccCcHHHHHHHHHHHHHhCCCCEEEecCCCCCC-CCcCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence 0011 1122344444443336776 99999999852 223578999999999999999998 899999999999999
Q ss_pred CCCccCCCCce----EEcCC-C-ccHHHHHHHHHHHHhhcc
Q 014151 381 EGMEEYNDDFG----IVPWE-R-TSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 381 ~~~~~~~dg~~----i~~~~-~-~~~~~~~~~~~~~~~~~~ 415 (430)
+ .+|..||+ +++.| + ++..+..|+++..++.+-
T Consensus 421 n--~eW~~gy~~RfGliyVD~~~~~~~R~~K~S~~wy~~vi 459 (464)
T 1wcg_A 421 N--FEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVV 459 (464)
T ss_dssp C--CCGGGGGGSBCCSEEECTTSTTCCEEECHHHHHHHHHH
T ss_pred c--cccccccCCCCceEEecCCCCccceeechHHHHHHHHH
Confidence 8 77877765 33322 1 113366777777776653
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-20 Score=188.19 Aligned_cols=312 Identities=16% Similarity=0.189 Sum_probs=202.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|+++++.++++|+++.++||.+++||++ |+ .
T Consensus 64 ~Yhry~EDi~Lm~elG~~~yRf---SI-sWsRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H-~D----l-- 132 (487)
T 3vii_A 64 SYHLYKEDVKILKELGAQVYRF---SI-SWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH-WD----L-- 132 (487)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C--
T ss_pred hHHHHHHHHHHHHHcCCCEEEe---eC-CHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEec-CC----C--
Confidence 3678999999999999999999 43 59999987 78999999999999999999999999999986 64 2
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------C-C-
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------D-P- 221 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~-~- 221 (430)
|.|....|+ |.++++.+.|.+|.+.+++| |++ .|--|.+.||| +.. . +
T Consensus 133 -P~~L~~~GG---------W~nr~~v~~F~~YA~~~f~~--------fgd--rVk~W~T~NEp-~~~~~gy~~g~~~~Pg 191 (487)
T 3vii_A 133 -PQALQDLGG---------WPNLVLAKYSENYARVLFKN--------FGD--RVKLWLTFNEP-LTFMDGYASEIGMAPS 191 (487)
T ss_dssp -BHHHHTTTS---------TTSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECH-HHHGGGGBCTTSSTTC
T ss_pred -cHHHHHcCC---------CCCHHHHHHHHHHHHHHHHH--------hcC--CCCeEEEecCc-hhhhcccccccccCCc
Confidence 566654443 88999999999999999999 998 68889999999 421 0 0
Q ss_pred ----ChHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-------------chhh---c
Q 014151 222 ----SGDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---A 272 (430)
Q Consensus 222 ----~~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~ 272 (430)
..+.++.- .....+.+|+.. |+-.|.+-....+. .|.. .+|. .|.. .
T Consensus 192 ~~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~--~P~~--~~p~D~~Aa~~~~~~~~~~f~dpi~ 267 (487)
T 3vii_A 192 INTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWC--EPAT--NSAEDRASCENYQQFNLGLYAHPIF 267 (487)
T ss_dssp CBCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SCHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCcc--CCCC--cCHHHHHHHHHHHHHhhhhhhhhHh
Confidence 01122222 234455677765 45555432211110 0100 0111 0110 0
Q ss_pred c--Cc------------------------chh----hccCCCCcceEEeeecCCCCC---CC---cch------------
Q 014151 273 L--GS------------------------DFI----RNSNNDNIDFASVHIYPDHWF---HD---LEF------------ 304 (430)
Q Consensus 273 ~--g~------------------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~---~~~------------ 304 (430)
. |. .|. ..+. ..+||+++++|..... .. ...
T Consensus 268 ~~~G~YP~~~~~~~~~~~~~~g~~~~~~p~~~~~d~~~i~-~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 346 (487)
T 3vii_A 268 TEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIR-GTHDFLGINFYTALLGKSGVEGYEPSRYRDSGVILTQDA 346 (487)
T ss_dssp SSSCSSCHHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHT-TCCSCEEEECCCEEEEESSCCSCSSCHHHHHTCEEECCT
T ss_pred ccCCCCCHHHHHHHHhhccccccccccCCCCCHHHHHHhc-CCCcEEEEecccceeeccCCCCCCCCcccccccccccCC
Confidence 0 11 000 0011 3689999999964210 00 000
Q ss_pred --h-hhHHH---HHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHH-hcCCCcccceee
Q 014151 305 --E-DDLKF---VTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIW 376 (430)
Q Consensus 305 --~-~~~~~---~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W 376 (430)
+ ....| ...-|+..+....+.+ ++||+|+|.|+...+ ...+..|..|++.++.++.+++ .+|..+.|++.|
T Consensus 347 ~~~~t~~gW~~i~P~Gl~~~L~~~~~rY~~~Pi~ITENG~~~~g-~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~v~GY~~W 425 (487)
T 3vii_A 347 AWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-GLNDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAW 425 (487)
T ss_dssp TSCCCSSTTCCCCHHHHHHHHHHHHHHHTSCCEEEEECCCCBSS-CSCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred CCCCCcCcccccCHHHHHHHHHHHHHHcCCCCEEEecCCCCCCC-CcCcHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 0 00011 1112333343333235 589999999997543 3457899999999999999999 789999999999
Q ss_pred eeccCCCccCCCCce----EEcCC-C-ccHHHHHHHHHHHHhhc---cccccccchhHh
Q 014151 377 QLFVEGMEEYNDDFG----IVPWE-R-TSTYKLLTEQSCGLGRI---SRLNLEKGNLKE 426 (430)
Q Consensus 377 ~~~~~~~~~~~dg~~----i~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 426 (430)
++.|+ .+|..||+ +++.| + .+..+..|+++..++.+ .|..+++..|..
T Consensus 426 Sl~Dn--feW~~Gy~~RfGlvyVD~~~~~~~R~~K~S~~wy~~vi~~ng~~~~~~~~~~ 482 (487)
T 3vii_A 426 SLMDN--FEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVLAEIMNTRKIPERFRDLEH 482 (487)
T ss_dssp CSBCC--CCGGGTTSSBCCSEEECTTSTTCCEEECHHHHHHHHHHHHTBCCGGGCC---
T ss_pred ecccc--chhhcccccccCeEEEcCCCCCcceeeccHHHHHHHHHHhCCCCCcccchhh
Confidence 99998 78877765 33332 1 11236777887777766 566666666543
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=196.17 Aligned_cols=304 Identities=13% Similarity=0.193 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|++|+ +. .|++++|.+ |.+|+++++.+|++|+.+.++||.++++|.+ |+ .|
T Consensus 127 Y~~y~eDi~lm~~lG~~~~Rf---sI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H-~d-------~P 194 (565)
T 2dga_A 127 YHLYEEDVKALKDMGMKVYRF---SI-SWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWH-WD-------TP 194 (565)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred HHHHHHHHHHHHHhCCCeEEe---cc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------Cc
Confidence 578999999999999999999 33 599999988 9999999999999999999999999999985 53 25
Q ss_pred hhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------C---C
Q 014151 155 NWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------D---P 221 (430)
Q Consensus 155 ~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~---~ 221 (430)
.|.... |+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+.. . .
T Consensus 195 ~~L~~~ygg---------w~~r~~~~~F~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~aPg~~ 255 (565)
T 2dga_A 195 QALEDKYGG---------FLNRQIVDDYKQFAEVCFKN--------FGDR--VKNWFTFNEPHTYCCFSYGEGIHAPGRC 255 (565)
T ss_dssp HHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTCBC
T ss_pred HHHHHhcCC---------CCCchHHHHHHHHHHHHHHH--------hCCC--CceEEEeccchhhhhcccccCccCcccc
Confidence 666543 32 77889999999999999999 9986 99999999997421 0 0
Q ss_pred C-------------hHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc------------
Q 014151 222 S-------------GDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE------------ 267 (430)
Q Consensus 222 ~-------------~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~------------ 267 (430)
+ ...++.- .....+.+|+.. |+-.|.+-....+.. |.. .+|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~a~HhlllAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~--P~s--~~p~D~~AA~r~~~~~ 331 (565)
T 2dga_A 256 SPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYE--PYQ--DSFLDDQARERSIDYN 331 (565)
T ss_dssp CTTSSSSBCCSCTTTHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCEEEEEEEEEEEE--ESS--SSHHHHHHHHHHHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCcee--cCC--CCHHHHHHHHHHHHHH
Confidence 0 1122211 234455677753 655554322111100 100 0111
Q ss_pred -chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---C--C-c---ch------------
Q 014151 268 -MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---H--D-L---EF------------ 304 (430)
Q Consensus 268 -~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~--~-~---~~------------ 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... . . . ..
T Consensus 332 ~~~flDp~~~G~YP~~~~~~l~~~lp~~t~~d~~~ik-g~~DFiGiNYY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (565)
T 2dga_A 332 MGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLA-SSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTG 410 (565)
T ss_dssp THHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEEEEEEEEEEECCCSTTCCCCSGGGGGCEEEESBC
T ss_pred HHHHHHHHhCCCCCHHHHHHHHhhCCCCCHHHHHHhC-CCCCEEEEccCcCceeecCCcccccCCccccccccccccccc
Confidence 1110 0110 000 0122 3589999999963210 0 0 0 00
Q ss_pred -------h-hhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCC------CCCChhHHHHHHHHHHHHHHHHHhc
Q 014151 305 -------E-DDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLI------KGFEPSLRDKLYKTILDIVYKSAKR 366 (430)
Q Consensus 305 -------~-~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~------~~~~~~~r~~~~~~~~~~~~~~~~~ 366 (430)
+ ....| ...-|+..+....+.+++| |+|+|.|+.... ....+..|..|++.++..+.+++++
T Consensus 411 ~~~~p~~~~t~~gWl~I~P~GLr~~L~~i~~rY~~PpI~ITENG~~~~d~~~~~~g~i~D~~RI~Yl~~hL~~v~~AI~d 490 (565)
T 2dga_A 411 SDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQ 490 (565)
T ss_dssp TTSCBSSCBCSSTTCBCCHHHHHHHHHHHHHTSCCCCEEEEECCCCEETTCTTCCSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCcCCCCCcccChHHHHHHHHHHHHHcCCCCEEEecCCCCCCCcccCcCCccCCHHHHHHHHHHHHHHHHHHHC
Confidence 0 00011 1122444444444447887 999999997532 1235689999999999999999999
Q ss_pred CCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhcccc
Q 014151 367 KRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 367 ~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~~~~ 417 (430)
+..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+-|.
T Consensus 491 GVdV~GY~~WSliDn--fEW~~Gy~kRfGLiyVD~~t~~~R~pK~S~~wYk~vi~~ 544 (565)
T 2dga_A 491 GADVRGHFTWGLIDN--FEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKFNSV 544 (565)
T ss_dssp TCCEEEEEEECSBCC--CCGGGGGGEECCSEEEETTTTTEEEECHHHHHHHHHTTC
T ss_pred CCCEEEEEECccccc--cchhcCcCCCCCeEEeCCCCCcceeechHHHHHHHHhCC
Confidence 999999999999998 78888776 33322112 336677777777766543
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-21 Score=196.82 Aligned_cols=301 Identities=14% Similarity=0.202 Sum_probs=195.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 71 ~YhrykeDi~lm~elG~~~yRf---sI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~d-------l 138 (481)
T 3f5l_A 71 QYHRYKEDVNLMKSLNFDAYRF---SI-SWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH-YD-------L 138 (481)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCS-SC-------C
T ss_pred hhhhHHHHHHHHHHcCCCEEEe---cC-cHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------C
Confidence 3678999999999999999999 33 599999987 8999999999999999999999999999986 53 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------C
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------D 220 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~ 220 (430)
|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.++|||.+.. .
T Consensus 139 P~~L~~~yGG---------W~nr~~v~~F~~Ya~~~~~~--------fgd--~Vk~W~T~NEp~~~~~~gy~~G~~aPg~ 199 (481)
T 3f5l_A 139 PLALEKKYGG---------WLNAKMADLFTEYADFCFKT--------FGN--RVKHWFTFNQPRIVALLGYDQGTNPPKR 199 (481)
T ss_dssp BHHHHHHHCG---------GGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--CCCeEEEccCchHHHHhcccccccCCcc
Confidence 5676543 43 77899999999999999999 987 688899999997421 0
Q ss_pred C---------ChHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-------------ch
Q 014151 221 P---------SGDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MW 269 (430)
Q Consensus 221 ~---------~~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w 269 (430)
. ..+.++.- .....+.+|+.. |+-.|.+-....+. .|.. .+|. .|
T Consensus 200 ~~~~~~g~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi~~~~~~~--~P~~--~~p~D~~Aa~~~~~~~~~~ 275 (481)
T 3f5l_A 200 CTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY--EALS--NSTEDQAAAQRARDFHIGW 275 (481)
T ss_dssp CTTCTTCCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SSHHHHHHHHHHHHHHTHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCCce--ecCC--CCHHHHHHHHHHHHHhhhh
Confidence 0 01222222 224445567765 35555432211110 0100 0111 01
Q ss_pred hh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---CC---c--ch----------------
Q 014151 270 AS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---HD---L--EF---------------- 304 (430)
Q Consensus 270 ~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~---~--~~---------------- 304 (430)
.. ..|. .|. ..+. ..+||+++++|..... .. . ..
T Consensus 276 f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (481)
T 3f5l_A 276 YLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVK-GSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKP 354 (481)
T ss_dssp HHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSSEEEECCCEEEEECCCCCCCCCCCHHHHTCCEEESEETTEE
T ss_pred hhhhhcCCCCCHHHHHHHhhcCCCCCHHHHHHhc-CCCcEEEEecccceEeccCCCCCcCCCCccccCcceeecccCCCC
Confidence 00 0010 000 0112 3589999999964210 00 0 00
Q ss_pred ---hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-----CChhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 305 ---EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-----FEPSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 305 ---~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-----~~~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
.....| ...-|+..+....+.+++| |+|+|.|+.....- ..+..|.+|++.++.++.+++++|..+.|
T Consensus 355 ~~~~t~~gW~~i~P~GL~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~g~v~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~G 434 (481)
T 3f5l_A 355 IGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVAG 434 (481)
T ss_dssp SSCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEESSCCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcCCCCCceecHHHHHHHHHHHHHHcCCCcEEEecCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 000011 1112444444443337766 99999999765420 12579999999999999999999999999
Q ss_pred ceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhh
Q 014151 373 ALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGR 413 (430)
Q Consensus 373 ~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~ 413 (430)
++.|++.|+ .+|..||+ +++.|-.+..+..|+++..++.
T Consensus 435 Y~~WSl~Dn--feW~~Gy~~RfGlvyVD~~~~~R~~K~S~~wy~~ 477 (481)
T 3f5l_A 435 YFAWSLLDN--FEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRD 477 (481)
T ss_dssp EEEECSBCC--CCGGGGGGEECCSEEECTTTCCEEECHHHHHHHH
T ss_pred EEeccccch--hhhhccccCccceEEEcCCCCCEeeccHHHHHHH
Confidence 999999998 88988776 3333212223556666666554
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=194.44 Aligned_cols=297 Identities=18% Similarity=0.209 Sum_probs=183.6
Q ss_pred EEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 57 YVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 57 ~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
++.|+++|- .. +.++.+++||+.||++|+|+||+.+| .|..++|.||.|| |+.||++|++|+++||+|
T Consensus 9 ~~~G~~y~p--e~----w~~~~~~~Dl~~mk~~G~n~vr~~if---~W~~~eP~~g~~~---f~~ld~~i~~~~~~Gi~v 76 (675)
T 3tty_A 9 IWYGGDYNP--EQ----WDKATMEEDMRMFNLAGIDVATVNVF---SWAKIQRDEVSYD---FTWLDDIIERLTKENIYL 76 (675)
T ss_dssp CEEEEECCG--GG----SCHHHHHHHHHHHHHHTCCEEEECSS---CHHHHBSSSSCBC---CHHHHHHHHHHHHTTCEE
T ss_pred ceEeeeCCh--hh----CCHHHHHHHHHHHHHcCCCEEEEeee---chhhhCCcCCccC---HHHHHHHHHHHHHCCCEE
Confidence 466888542 22 24899999999999999999999665 4888999999998 789999999999999999
Q ss_pred EEeccCCcccCCCc-----chhhhhhhh--hCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCcee
Q 014151 137 LLSLVNNLQAYGGK-----TQYVNWAWE--EGIGI--SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIF 207 (430)
Q Consensus 137 il~l~~~w~~~gg~-----~~y~~W~~~--~G~~~--~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~ 207 (430)
|+.+... +. ..|+.|... .|.+. +......+++|.+++.++++++.+++| |+++|+|+
T Consensus 77 il~~~~~-----~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~r--------y~~~p~Vi 143 (675)
T 3tty_A 77 CLATSTG-----AHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAER--------YKDHPQIV 143 (675)
T ss_dssp EEECCTT-----SCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHH--------TTTCTTEE
T ss_pred EEeCCCC-----CCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHH--------hCCCCcEE
Confidence 9987642 12 123333311 12211 122334578999999999999999999 99999999
Q ss_pred EEeecCCCCCCCCC--------------------------------------------------------C---------
Q 014151 208 AWELINEPRCMSDP--------------------------------------------------------S--------- 222 (430)
Q Consensus 208 ~wel~NEp~~~~~~--------------------------------------------------------~--------- 222 (430)
+|++.||+.+...+ +
T Consensus 144 ~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~r 223 (675)
T 3tty_A 144 MWHVSNEYGGYCYCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRR 223 (675)
T ss_dssp EEECSSSCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHH
T ss_pred EEEEccccCCCcCCHHHHHHHHHHHHHHhcCHHHHHHHhCcccccCccCCHHHhcCCccccccccccccCChHHHHHHHH
Confidence 99999999853110 0
Q ss_pred --hHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCC
Q 014151 223 --GDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH 300 (430)
Q Consensus 223 --~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~ 300 (430)
.+.+.++++.+.+.||+.+|+++|++...|.+. +.|..+ ..+.+|+++++.||.. ..
T Consensus 224 F~~~~~~~~~~~~~d~iR~~~P~~pvt~N~~~~~~------------------~~D~~~--~a~~~Dvvs~D~Yp~~-~~ 282 (675)
T 3tty_A 224 FQSDSLLECFKMERDELKRWTPDIPVTTNLMGFYP------------------ELDYFK--WAKEMDVVSWDNYPSM-DT 282 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSCEECEECTTCT------------------TSCHHH--HHTTCSSCEEECCCCT-TS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEccccccC------------------CcCHHH--HhhcCCEEEECCCCCc-CC
Confidence 012334456778889999999999986544221 012111 1246899999999963 32
Q ss_pred CcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC-CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI-KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 301 ~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
. .....+ ..+..+..+ .+||++|.|......+ ...+...+...++.+. +++... +..+.+||+|.
T Consensus 283 ~---~~~~a~----~~dl~R~~~--~g~p~~~mE~~~~~~~w~~~~~~~~pg~~r~~~---~~~~A~--Ga~~v~~f~wr 348 (675)
T 3tty_A 283 P---FSFTAM----AHNLMRGLK--SGQPFMLMEQTPGVQNWQPYNSAKRPGVMRLWS---YQAVAH--GADTVMFFQLR 348 (675)
T ss_dssp C---HHHHHH----HHHHHHHTT--TTCCEEEEECCSSCCTTSSBCCCCCTTHHHHHH---HHHHHT--TEEEEEESCSB
T ss_pred C---HHHHHH----HHHHHHhhc--CCCCeEEecCCCCCCCCcCCCCCCCccHHHHHH---HHHHhc--ccCeEeeeecc
Confidence 1 111111 122222222 5799999999654221 0010011112222222 222223 47889999998
Q ss_pred cCCC-ccCCCCceEEcCCC-c--cHHHHHHHHHHHHhhc
Q 014151 380 VEGM-EEYNDDFGIVPWER-T--STYKLLTEQSCGLGRI 414 (430)
Q Consensus 380 ~~~~-~~~~dg~~i~~~~~-~--~~~~~~~~~~~~~~~~ 414 (430)
.... .+. ...++...++ + ...+-+++-.+.+..+
T Consensus 349 ~~~~g~E~-~h~g~~~~~g~~~~r~~~ev~~~~~~l~~l 386 (675)
T 3tty_A 349 RSVGACEK-YHGAVIEHVGHEHTRVFRECAELGKELQQL 386 (675)
T ss_dssp CCCSGGGT-TSCCSBCTTCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCchhh-hhccccCCCCCCCchHHHHHHHHHHHHHHh
Confidence 6422 122 1234443322 1 2344455555555444
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=193.31 Aligned_cols=302 Identities=15% Similarity=0.211 Sum_probs=196.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 71 ~Y~~~~eDi~lm~~~G~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------ 139 (490)
T 1cbg_A 71 EYHRYKEDIGIMKDMNLDAYRF---SI-SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFH-WD------ 139 (490)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hHHHHHHHHHHHHHhCCCeEEe---cc-cHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC------
Confidence 3578999999999999999999 33 599999987 8999999999999999999999999999975 53
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------- 219 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------- 219 (430)
.|.|.... |+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+..
T Consensus 140 -~P~~L~~~ygg---------w~~~~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~P 199 (490)
T 1cbg_A 140 -VPQALEDEYRG---------FLGRNIVDDFRDYAELCFKE--------FGDR--VKHWITLNEPWGVSMNAYAYGTFAP 199 (490)
T ss_dssp -CBHHHHHHHCG---------GGSTTHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTT
T ss_pred -CCHhHHhhcCC---------cCCchHHHHHHHHHHHHHHH--------hCCc--ceEEEEccCchhhhhcccccCccCC
Confidence 25676553 43 67788999999999999999 9986 99999999997421
Q ss_pred -CCC-------------hHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc---------
Q 014151 220 -DPS-------------GDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE--------- 267 (430)
Q Consensus 220 -~~~-------------~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~--------- 267 (430)
..+ ...++.- .....+.+|+.. |+-.|.+-....+. .|.. -+|.
T Consensus 200 g~~~~~~~~~~~~~~~~~~~~~a~h~~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~--~P~~--~~p~D~~aa~~~~ 275 (490)
T 1cbg_A 200 GRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWF--EPAS--KEKADVDAAKRGL 275 (490)
T ss_dssp CCCCGGGCSCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SSHHHHHHHHHHH
T ss_pred cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEEecCCce--ecCC--CCHHHHHHHHHHH
Confidence 000 1122221 234445667753 55555432211110 0100 0111
Q ss_pred ----chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---C---C--cch----------
Q 014151 268 ----MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---H---D--LEF---------- 304 (430)
Q Consensus 268 ----~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~---~--~~~---------- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... . . ...
T Consensus 276 ~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DFlGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (490)
T 1cbg_A 276 DFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELT-GSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATF 354 (490)
T ss_dssp HHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEECCCEEEEEECCCCTTCCCCHHHHTCEEEES
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHhcCCCCCHHHHHHhC-CCCCEEEEecCcCeEEecCCCCCccccccccCCcccccc
Confidence 0110 0110 000 0122 3589999999974211 0 0 000
Q ss_pred ---------hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-------CChhHHHHHHHHHHHHHHHHH
Q 014151 305 ---------EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-------FEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 305 ---------~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~ 364 (430)
.....| ...-|+..+....+.+++| |+|+|.|+...... ..+..|.+|++.++..+.+++
T Consensus 355 ~~~~~~~~~~t~~gWl~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai 434 (490)
T 1cbg_A 355 EHNGKPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAI 434 (490)
T ss_dssp EETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEECCTTSCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcCCCCCCccChHHHHHHHHHHHHhcCCCcEEEEcCCcCcccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 000011 1122444444443347787 99999999764310 135799999999999999999
Q ss_pred hcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 365 KRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 365 ~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
++|..+.|++.|++.|+ .+|.+||+ +++.|-.+ ..+..|+++..++.+
T Consensus 435 ~dGv~V~GY~~WSllDn--feW~~Gy~~RfGliyVD~~~~~~R~pK~S~~wy~~v 487 (490)
T 1cbg_A 435 GDGVNVKGYFAWSLFDN--MEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSF 487 (490)
T ss_dssp HTTCCEEEEEESCSBCC--CCGGGTTSEECCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred HCCCCEEEEEecccccc--cchhcccccCCceEEECCCCCcceeechHHHHHHHH
Confidence 99999999999999998 77888876 33222111 236667777666654
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=196.33 Aligned_cols=305 Identities=15% Similarity=0.222 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
..++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 129 Yh~y~eDi~lm~~lG~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H-~d------- 196 (565)
T 1v02_A 129 YHMYAEDVRLLKEMGMDAYRF---SI-SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFH-WD------- 196 (565)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE---EC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred HHHHHHHHHHHHHhCCCeEEc---cc-CHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC-------
Confidence 578999999999999999999 33 599999988 8999999999999999999999999999985 53
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C-
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D- 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~- 220 (430)
.|.|.... |+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+.. .
T Consensus 197 ~P~~L~~~ygg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg 257 (565)
T 1v02_A 197 TPQALVDAYGG---------FLDERIIKDYTDFAKVCFEK--------FGKT--VKNWLTFNEPETFCSVSYGTGVLAPG 257 (565)
T ss_dssp CBHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCCSTTC
T ss_pred CCHHHHhhcCC---------CCCchHHHHHHHHHHHHHHH--------hCCc--ceEEEEccCchhhhhhhhccCcCCCc
Confidence 25666543 32 77889999999999999999 9986 99999999997421 0
Q ss_pred -CC-------------hHHHHHH------HHHHHHHHHhc--CCCCEEEEccCCccCCCCCCCcccCcc-----------
Q 014151 221 -PS-------------GDTLQDW------IDEMSAFVKSI--DKKHLVTVGLEGFYGPKSPKRLTVNPE----------- 267 (430)
Q Consensus 221 -~~-------------~~~~~~w------~~~~~~~Ir~~--dp~~lV~~G~~g~~~~~~~~~~~~np~----------- 267 (430)
.+ .+.++.- .....+.+|+. +|+-.|.+-....+.. |.. -+|.
T Consensus 258 ~~~~~~~~~c~~g~~~~~~~~a~HhlllAHa~Av~~~r~~~~~~~g~IGi~l~~~~~~--P~s--~~p~D~~AA~r~~~~ 333 (565)
T 1v02_A 258 RCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVFGRV--PYT--NTFLDQQAQERSMDK 333 (565)
T ss_dssp BCCTTSCSSBCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCTTTCEEEEEEECCEEE--ESS--SSHHHHHHHHHHHHH
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCCeee--cCC--CCHHHHHHHHHHHHH
Confidence 00 1122221 23444567776 6765554432211110 100 0111
Q ss_pred --chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---------CCcch-----------
Q 014151 268 --MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---------HDLEF----------- 304 (430)
Q Consensus 268 --~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---------~~~~~----------- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... .....
T Consensus 334 ~~~~flDp~~~G~YP~~~~~~~~~~lp~~t~~d~~~ik-g~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (565)
T 1v02_A 334 CLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLV-GSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETK 412 (565)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEECCCEEEEEECCCSTTCCCCSGGGGGCEEEESB
T ss_pred HhhhhhhhhcCCCCCHHHHHHHHhhCCCCCHHHHHHhC-CCCCEEEEecccCcEEecCCCcccCCCcccccccccccccc
Confidence 1100 0110 000 0012 3589999999974211 00000
Q ss_pred --------h-hhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-------CChhHHHHHHHHHHHHHHHHH
Q 014151 305 --------E-DDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-------FEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 305 --------~-~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~ 364 (430)
+ ....| ...-|+..+....+.+++| |+|+|.|+...... ..+..|.+|++.++..+.+++
T Consensus 413 ~~~~~p~~~~t~~gWl~i~P~GLr~~L~~i~~rY~~PpI~ITENG~~~~d~~~~~~~g~v~D~~RI~Yl~~hL~~v~~AI 492 (565)
T 1v02_A 413 GPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI 492 (565)
T ss_dssp CTTSCBSSCBCSSSSCBCCTHHHHHHHHHHHHHSCCCCEEEEEECCCEECSSCCCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcCCCCCcccChHHHHHHHHHHHHhcCCCceEEeccCCCcccccccCccccccChHHHHHHHHHHHHHHHHH
Confidence 0 00011 1122444444443347776 99999999764311 136799999999999999999
Q ss_pred hcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhccccc
Q 014151 365 KRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 365 ~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 418 (430)
++|..+.|++.|++.|+ .+|.+||+ +++.|-.+ ..+..|+++..++.+-..+
T Consensus 493 ~dGVdV~GY~~WSllDn--fEW~~Gy~~RfGLiyVD~~~~~~R~pK~S~~wyk~vi~~~ 549 (565)
T 1v02_A 493 DLGADVRGYFAWSLLDN--FEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAA 549 (565)
T ss_dssp HTTCCEEEEEEECSBCC--CCGGGGGGEECCSEEEEGGGTTEEEECHHHHHHHHHTC--
T ss_pred HCCCCEEEEEECcCccc--cccccCCCcCCCeEEecCCCCcceeechHHHHHHHHHHhC
Confidence 99999999999999998 77888876 33332122 3377788888888875444
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=196.42 Aligned_cols=211 Identities=16% Similarity=0.174 Sum_probs=146.4
Q ss_pred CCCc--EEEe-CCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCC
Q 014151 38 EMGF--VTRN-GTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQF 114 (430)
Q Consensus 38 ~~gf--v~~~-g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~ 114 (430)
+.|| |+++ ++.|++||+|++++|+|.|.....-....+.+.++++|+.||++|+|+||++.. + .
T Consensus 265 ~~GfR~ie~~~~~~f~LNGk~i~lkGvn~h~d~~~~G~a~~~~~~~~dl~~~K~~G~N~iR~~h~-----p----~---- 331 (801)
T 3gm8_A 265 PVGFRQLEFNPVSGFLLNGKSLKIKGVCDHHTVGAVGAAVPDDLLHYRLKLLKDMGCNAIRTSHN-----P----F---- 331 (801)
T ss_dssp EECBCCEEEETTTEEEETTEECCEEEEEECSCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEETTS-----C----C----
T ss_pred ecCceEEEEecCCeeEECCEEeEEEccCcCCCCcccCccCCHHHHHHHHHHHHHCCCcEEEecCC-----C----C----
Confidence 4577 5666 678999999999999997654322223457899999999999999999999542 1 1
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~ 194 (430)
+ ++++++|+++||+|+..++..|...+ . ..+ .++...+..++.++.++.|
T Consensus 332 ~-------~~~~dlcDe~GilV~~E~~~~w~~~~-~-----------------~~~--~~~~~~~~~~~~~~~mv~r--- 381 (801)
T 3gm8_A 332 S-------PAFYNLCDTMGIMVLNEGLDGWNQPK-A-----------------ADD--YGNYFDEWWQKDMTDFIKR--- 381 (801)
T ss_dssp C-------HHHHHHHHHHTCEEEEECCSSSSSCS-S-----------------TTS--GGGTHHHHHHHHHHHHHHH---
T ss_pred c-------HHHHHHHHHCCCEEEECCchhhcCCC-C-----------------ccc--ccHHHHHHHHHHHHHHHHh---
Confidence 1 47899999999999998776664211 0 000 1234566667889999999
Q ss_pred cccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC
Q 014151 195 ITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG 274 (430)
Q Consensus 195 ~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g 274 (430)
++|||+|++|.+.||+... . .+++++|.+.+|++||.|+|+.|+..... . + .
T Consensus 382 -----~rNHPSIi~Ws~gNE~~g~----~---~~~~~~l~~~~k~~DptRpvt~~~~~~~~-~-------~------~-- 433 (801)
T 3gm8_A 382 -----DRNHPSIIMWSIGNEVTGA----T---PEIQHNLVSLFHQLDPDRPVTQGGTDPTR-G-------M------K-- 433 (801)
T ss_dssp -----HTTCTTEEEEEEEESCSSC----C---HHHHHHHHHHHHHHCTTSCEEEETCCC---------------------
T ss_pred -----cCCCCeEEEEECccCCCCc----H---HHHHHHHHHHHHHHCCCCCEEEccccccc-c-------c------c--
Confidence 9999999999999999321 1 46789999999999999999987532100 0 0 0
Q ss_pred cchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCC
Q 014151 275 SDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338 (430)
Q Consensus 275 ~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~ 338 (430)
..+.. ..+.+|++++++|... .. . +.. ..++..+||++++|||..
T Consensus 434 ~~~~~--~~~~~Dv~g~ny~~~~-y~--------~-----~~~---~~~~~p~kpi~~sE~~~~ 478 (801)
T 3gm8_A 434 TDYQK--KFNYLDIIGFNGNGEE-IG--------E-----LEH---FHKNYPTLCAIATEVPHT 478 (801)
T ss_dssp ---------CCCSEEEECGGGGS-TT--------H-----HHH---HHHHCTTSEEEESSCCBB
T ss_pred cchhh--cccccCEEEeccchhh-hh--------h-----hHH---HHHhCCCCcEEEEeCCCc
Confidence 00100 1233899999998653 21 0 111 111237899999999975
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-20 Score=191.55 Aligned_cols=307 Identities=15% Similarity=0.210 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC----------------------------CCCChHHHHHHHHHHH
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP----------------------------GQFDERVFKALDHVIV 127 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p----------------------------g~~de~~l~~lD~~l~ 127 (430)
..+.++|++.|++||+|+.|+ +. +|+++.|.. |..|+++++.++++|+
T Consensus 60 Yh~y~eDi~l~~elG~~~yRf---SI-sWsRI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid 135 (489)
T 1uwi_A 60 WGNYKTFHNNAQKMGLKIARL---NS-EWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFK 135 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCCCEEEE---eC-cHHHCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 468899999999999999998 33 477777642 5679999999999999
Q ss_pred HHHHcCCEEEEeccCCcccCCCcchhhhhhhh-----hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC
Q 014151 128 EARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE-----EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202 (430)
Q Consensus 128 ~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~-----~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~ 202 (430)
.+.++||..++||++ |+. |.|.++ .|.- ....=|.++++.+.|.+|.+.+++| |++
T Consensus 136 ~Ll~~GIeP~VTL~H-~Dl-------P~~L~d~y~~~~g~~---~~~GGW~n~~~v~~F~~YA~~~f~~--------fgd 196 (489)
T 1uwi_A 136 DLKSRGLYFIQNMYH-WPL-------PLWLHDPIRVRRGDF---TGPSGWLSTRTVYEFARFSAYTAWK--------FDD 196 (489)
T ss_dssp HHHHTTCEEEEESCC-SCC-------BGGGBCHHHHHTTCC---SSCBGGGSHHHHHHHHHHHHHHHHH--------HTT
T ss_pred HHHHcCCcceEEeec-CCc-------cHHHHHhhhhccccc---ccCCCcCCHHHHHHHHHHHHHHHHH--------hCC
Confidence 999999999999986 642 455532 0100 0001188999999999999999999 998
Q ss_pred CCceeEEeecCCCCCCC-----------C---CCh-HHHHH------HHHHHHHHHHhcCCCCE-EEEccCCccCCCCCC
Q 014151 203 DPTIFAWELINEPRCMS-----------D---PSG-DTLQD------WIDEMSAFVKSIDKKHL-VTVGLEGFYGPKSPK 260 (430)
Q Consensus 203 ~p~I~~wel~NEp~~~~-----------~---~~~-~~~~~------w~~~~~~~Ir~~dp~~l-V~~G~~g~~~~~~~~ 260 (430)
.|--|.+.|||.+.. . .+. ...+. -..+..+.+|+..+... +++....++ +.++.
T Consensus 197 --rVk~W~T~NEp~~~~~~gy~~~~~~~~pg~~~~~~~~~a~h~~llAha~a~~~~r~~~~~~iGi~~~~~~~~-P~~~~ 273 (489)
T 1uwi_A 197 --LVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQ-PLTDK 273 (489)
T ss_dssp --TCSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEEEEEEE-ESSTT
T ss_pred --ccCeEEEecCchheccccccccccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHhcccccceeeeecccccc-CCCcc
Confidence 588899999996421 0 011 11111 12344456777766532 222211111 01110
Q ss_pred CcccCc------cchhh---ccCc------chhhccCCCCcceEEeeecCCCC--------------CCCcc--------
Q 014151 261 RLTVNP------EMWAS---ALGS------DFIRNSNNDNIDFASVHIYPDHW--------------FHDLE-------- 303 (430)
Q Consensus 261 ~~~~np------~~w~~---~~g~------df~~~~~~~~iD~~s~H~Y~~~w--------------~~~~~-------- 303 (430)
...... ..|.. ..|. ..........+||+++++|.... .....
T Consensus 274 d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~g~~DFiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (489)
T 1uwi_A 274 DMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSVSLAG 353 (489)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHTCEEEETTEEEECTTTTTCCSCEEEEEEEEEEEEEETTEEEECTTSTTSSCTTSBCTTS
T ss_pred CHHHHHHHHhhhcccccCccccCccccccceeeecccCCccCcceeccceeeeeecCCCcccCCCCcCcccccccccCCC
Confidence 000000 01110 0110 01111123468999999994210 00000
Q ss_pred hh-hhHHH--HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 304 FE-DDLKF--VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 304 ~~-~~~~~--~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
.+ ....| ...-|+..+....+.+++||+|+|.|+.... +..|..|++.++.++.+++++|..+.|++.|++.|
T Consensus 354 ~~~t~~gW~i~P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~~----D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D 429 (489)
T 1uwi_A 354 LPTSDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADDA----DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLAD 429 (489)
T ss_dssp CBBCTTCCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCSS----CSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC
T ss_pred ccccCCCCeechHHHHHHHHHHHHhhCCCEEEecCCCCCCC----chHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchH
Confidence 00 00000 0111233333332237899999999997654 56799999999999999999999999999999999
Q ss_pred CCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhc
Q 014151 381 EGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 381 ~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
+ .+|..||+ +++.|-.+..+..|+++..++.+
T Consensus 430 n--fEW~~Gy~~RfGliyVD~~t~~R~~K~S~~wy~~i 465 (489)
T 1uwi_A 430 N--YEWASGFSMRFGLLKVDYNTKRLYWRPSSLVYREI 465 (489)
T ss_dssp C--CCGGGGGGSCCCSEEEETTTTEEEECHHHHHHHHH
T ss_pred h--hChhhhcccccceEEEeCCCCCeeeccHHHHHHHH
Confidence 8 78877765 33332122236667777777766
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-20 Score=194.25 Aligned_cols=304 Identities=15% Similarity=0.161 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
..++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 96 Y~~y~eDi~lm~~lG~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H-~d----~-- 164 (532)
T 2jf7_A 96 YHMYKEDIKIMKQTGLESYRF---SI-SWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFH-WD----L-- 164 (532)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC----C--
T ss_pred HHHHHHHHHHHHHcCCCeEec---cc-cHHHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CC----C--
Confidence 578999999999999999998 33 599999987 8999999999999999999999999999975 53 2
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------ 219 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------ 219 (430)
|.|.... |+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+..
T Consensus 165 -P~~L~~~ygg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg 224 (532)
T 2jf7_A 165 -PQALEDEYGG---------FLSHRIVDDFCEYAEFCFWE--------FGDK--IKYWTTFNEPHTFAVNGYALGEFAPG 224 (532)
T ss_dssp -BHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HGGG--CSEEEEEECHHHHHHHHHTSCCSTTC
T ss_pred -CHHHHhhcCC---------CCCchHHHHHHHHHHHHHHH--------hCCc--CceEEEccCchhhhcccccccccCCc
Confidence 5666543 32 77889999999999999999 9985 89999999997421
Q ss_pred CC--------ChHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-------------ch
Q 014151 220 DP--------SGDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MW 269 (430)
Q Consensus 220 ~~--------~~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w 269 (430)
.. ....++.- .....+.+|+.. |+-.|.+-....+. .|.. .+|. .|
T Consensus 225 ~~s~~~~~~~~~~~~~a~Hh~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~--~P~~--~~p~D~~AA~~~~~~~~~~ 300 (532)
T 2jf7_A 225 RGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWM--EPLS--DVQADIDAQKRALDFMLGW 300 (532)
T ss_dssp CSSTTCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SSHHHHHHHHHHHHHHTHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEecCCee--ecCC--CCHHHHHHHHHHHHHHHHH
Confidence 00 11112211 234455667753 55454432211110 0100 0111 01
Q ss_pred hh---ccCc--------------chh----hccCCCCcceEEeeecCCCCCC---C--c---ch----------------
Q 014151 270 AS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWFH---D--L---EF---------------- 304 (430)
Q Consensus 270 ~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~~---~--~---~~---------------- 304 (430)
.. ..|. .|. ..+. ..+||+++++|...... . . ..
T Consensus 301 fldp~~~G~YP~~~~~~~~~~lp~~~~~d~~~i~-~~~DFlGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 379 (532)
T 2jf7_A 301 FLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLK-GCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQKP 379 (532)
T ss_dssp HHTHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSCEEEEECCEEEEEECCC-----CCHHHHSCEEEESBSSSCB
T ss_pred hhhHhhCCCCCHHHHHHHHhcCCCCCHHHHHHhc-CCCCEEEEccCcCcEeecCCCCccccccccCCCccccccccCCCC
Confidence 10 0110 000 0122 35899999999643110 0 0 00
Q ss_pred ---hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 305 ---EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 305 ---~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
.....| ...-|+..+....+.+++| |+|+|.|+..... ...+..|..|++.++..+.+++++|..+
T Consensus 380 ~~~~t~~gW~~I~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~~~g~v~D~~RI~Yl~~hl~~~~~Ai~dGv~V 459 (532)
T 2jf7_A 380 IGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGVNV 459 (532)
T ss_dssp SSEECTTSSCEECHHHHHHHHHHHHHHHCCSCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCcCCCCCcccCcHHHHHHHHHHHHhcCCCeEEEEecCCCCcccccccccCCcCCHHHHHHHHHHHHHHHHHHHCCCCE
Confidence 000011 1122344444443347777 9999999976431 1235799999999999999999999999
Q ss_pred ccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhcccc
Q 014151 371 AGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 371 ~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (430)
.|++.|++.|+ .+|.+||+ +++.|-.+..+..|+++..++.+-..
T Consensus 460 ~GY~~WSliDn--feW~~Gy~~RfGliyVD~~t~~R~pK~S~~wyk~vi~~ 508 (532)
T 2jf7_A 460 KGYFVWSFFDN--FEWNLGYICRYGIIHVDYKSFERYPKESAIWYKNFIAG 508 (532)
T ss_dssp EEEEEECSBCC--CCGGGTTSEECCSEEECTTTCCEEECHHHHHHHHHHHC
T ss_pred EEEEeccCccc--cchhccccCcCCeEEecCCCCceeechHHHHHHHHHHh
Confidence 99999999998 77888876 33332122236667777777666433
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=190.83 Aligned_cols=302 Identities=15% Similarity=0.215 Sum_probs=193.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|.+ |+
T Consensus 60 ~Y~~y~eDi~lm~~lG~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H-~d------ 128 (473)
T 3ahy_A 60 SYNRTAEDIALLKSLGAKSYRF---SI-SWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFH-WD------ 128 (473)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEE---EC-CHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hHHHHHHHHHHHHHhCCCeEEc---cc-cHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc------
Confidence 3568999999999999999999 43 599999987 8999999999999999999999999999975 53
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------- 219 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------- 219 (430)
.|.|.... |+ |.+ ++..+.|.+|.+.+++| | + .|..|.+.|||.+..
T Consensus 129 -~P~~L~~~ygg---------w~~~~~~~~~f~~ya~~~~~~--------~-d--rV~~W~t~NEp~~~~~~gy~~G~~~ 187 (473)
T 3ahy_A 129 -LPEGLHQRYGG---------LLNRTEFPLDFENYARVMFRA--------L-P--KVRNWITFNEPLCSAIPGYGSGTFA 187 (473)
T ss_dssp -CBHHHHHHHCG---------GGCTTHHHHHHHHHHHHHHHH--------C-T--TCCEEEEEECHHHHHHHHHTTCCST
T ss_pred -CCHHHHhhcCC---------CcCchhhHHHHHHHHHHHHHH--------h-C--cCCEEEecCchhhhhccccccccCC
Confidence 25676543 42 667 89999999999999999 9 5 599999999997521
Q ss_pred C--CC-hHHHHHH------HHHHHHHHHhcCC----CCEEEEccCCccCCCCCCCcccCcc-------------chhh--
Q 014151 220 D--PS-GDTLQDW------IDEMSAFVKSIDK----KHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS-- 271 (430)
Q Consensus 220 ~--~~-~~~~~~w------~~~~~~~Ir~~dp----~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~-- 271 (430)
. .+ ...++.- .....+.+|+..| +-.|.+-....+. .|.. ..+|. .|..
T Consensus 188 Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~~IGi~l~~~~~--~P~~-~~~~~D~~aa~~~~~~~~~~f~dp 264 (473)
T 3ahy_A 188 PGRQSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFT--YPWD-AADPADKEAAERRLEFFTAWFADP 264 (473)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHHTCCTTSCCEEEEEEECCEE--EESS-TTCHHHHHHHHHHHHHHTHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEEeCCee--eeCC-CCCHHHHHHHHHHHHHhhhhhcch
Confidence 0 01 1222221 2345566788655 4344332211110 0100 00111 1100
Q ss_pred -ccCc--------------chh----hccCCCCcceEEeeecCCCCCC-----------Ccc--------------hhhh
Q 014151 272 -ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWFH-----------DLE--------------FEDD 307 (430)
Q Consensus 272 -~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~~-----------~~~--------------~~~~ 307 (430)
..|. .|. ..+. ..+||+++++|...... ... ....
T Consensus 265 ~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 343 (473)
T 3ahy_A 265 IYLGDYPASMRKQLGDRLPTFTPEERALVH-GSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNCIGPETQ 343 (473)
T ss_dssp HHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSSEEEECCCEEEEEECSSCCCTTCCSSSEEEESBCTTCCBSCCCCS
T ss_pred hccCCCCHHHHHHHHhhCCCCCHHHHHHhc-CCCCEEEEecccCeEEecCCCCCCcccCCCcccccccccCCCCCCCcCC
Confidence 0010 000 0122 45899999999642100 000 0000
Q ss_pred HHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHH-hcCCCccccee
Q 014151 308 LKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALI 375 (430)
Q Consensus 308 ~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~ 375 (430)
..| ...-|+..+....+.+++| |+|+|.|+..... ...+..|.+|++.++..+.+++ ++|..+.|++.
T Consensus 344 ~gW~~i~P~GL~~~L~~~~~rY~~Ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~ 423 (473)
T 3ahy_A 344 SPWLRPCAAGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVELDGVNVKGYFA 423 (473)
T ss_dssp STTCCCCHHHHHHHHHHHHHHHTSCCEEEEEECCCCTTGGGSCHHHHHCCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCcccCcHHHHHHHHHHHHhcCCCcEEEEecCccccCccccccccccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 111 1122444444443347777 9999999986421 0235799999999999999999 88999999999
Q ss_pred eeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 376 WQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 376 W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+
T Consensus 424 WSl~Dn--feW~~Gy~~RfGliyVD~~~~~~R~~K~S~~wy~~v 465 (473)
T 3ahy_A 424 WSLMDN--FEWADGYVTRFGVTYVDYENGQKRFPKKSAKSLKPL 465 (473)
T ss_dssp ECSSCC--CCGGGTTSSCCCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred CcCccc--cccccCcCCCCCeEEeCCCCCCceeeccHHHHHHHH
Confidence 999998 77877765 33322111 235566666666554
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=189.08 Aligned_cols=308 Identities=15% Similarity=0.239 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC---CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS---PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~---pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
..++++|++.|+++|+|+.|+ +. +|++++|. +|.+|+++++.++++|+.+.++||..++||++ |+
T Consensus 75 Yhry~EDi~Lm~elG~~~yRf---SI-sWsRI~P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-~d------- 142 (540)
T 4a3y_A 75 YHLYKEDVNILKNLGLDAYRF---SI-SWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFH-WD------- 142 (540)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred hHhhHHHHHHHHHcCCCEEEe---ec-cHhhcccCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccC-CC-------
Confidence 578999999999999999998 43 59999886 57899999999999999999999999999986 64
Q ss_pred hhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C-
Q 014151 153 YVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D- 220 (430)
Q Consensus 153 y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~- 220 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.++|||.+.. .
T Consensus 143 lP~~L~~~yGG---------W~nr~~v~~F~~Ya~~~f~~--------fgd--rVk~W~T~NEP~~~~~~gy~~G~~aPg 203 (540)
T 4a3y_A 143 VPQALEDEYGG---------FLSPRIVDDFCEYAELCFWE--------FGD--RVKHWMTLNEPWTFSVHGYATGLYAPG 203 (540)
T ss_dssp CBHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTTC
T ss_pred CcHHHHhccCC---------cCChHHHHHHHHHHHHHHHH--------hcc--ccCEeeEccccHHhhhhhhhhcCCCCC
Confidence 25677653 54 88999999999999999999 998 588899999996320 0
Q ss_pred -------------------------------CChHHHHHH------HHHHHHHHHhcCC---CCEEEEccCCccCCC-CC
Q 014151 221 -------------------------------PSGDTLQDW------IDEMSAFVKSIDK---KHLVTVGLEGFYGPK-SP 259 (430)
Q Consensus 221 -------------------------------~~~~~~~~w------~~~~~~~Ir~~dp---~~lV~~G~~g~~~~~-~~ 259 (430)
...+.++.- .......+|+..+ +-.|.+.....+..+ ++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a~hh~llAha~Av~~~r~~~~~~~~g~IGi~~~~~~~~P~~~ 283 (540)
T 4a3y_A 204 RGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDE 283 (540)
T ss_dssp CCCC-------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEEEEEEEESST
T ss_pred ccccchhhhcchhhhhhhhhhhhccccccccchHHHHHHHHHHHHHhHHHHHHHHHhccccccceEEEEecccccccCCC
Confidence 000111111 1233344565433 333432211111000 00
Q ss_pred CCcccCcc-------------chhh---ccCc--------------chh---hccCCCCcceEEeeecCCCCCC------
Q 014151 260 KRLTVNPE-------------MWAS---ALGS--------------DFI---RNSNNDNIDFASVHIYPDHWFH------ 300 (430)
Q Consensus 260 ~~~~~np~-------------~w~~---~~g~--------------df~---~~~~~~~iD~~s~H~Y~~~w~~------ 300 (430)
. ++. .|.. ..|. .+. ..+....+||+++++|......
T Consensus 284 ~----~~~~~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~l~~~~~~d~~li~~~~DFiGinyY~~~~v~~~~~~~ 359 (540)
T 4a3y_A 284 N----SASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNS 359 (540)
T ss_dssp T----CHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEEEEEEEEEEECC---
T ss_pred C----cHhHHHHHHHHHHHHhcccchHHhcCCCcHHHHHHhhccCCcCCHHHHHhhcCCCCeeEEecccceEEecCccCc
Confidence 0 000 0100 0010 000 0011245899999999531100
Q ss_pred --Ccc--h-------------------hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCC-C------CCh
Q 014151 301 --DLE--F-------------------EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIK-G------FEP 346 (430)
Q Consensus 301 --~~~--~-------------------~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~-~------~~~ 346 (430)
... . .....| ...-|+..+....+.+++| |+|+|.|+..... . ..+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~t~~~W~~I~P~GL~~~L~~l~~rY~~P~I~ItENG~~~~~~~~~~~~~~i~D 439 (540)
T 4a3y_A 360 SGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKD 439 (540)
T ss_dssp ----CCCHHHHTCEEEECEETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHHCCSCEEEEEECCCCCCCTTCCHHHHTCC
T ss_pred ccccccccccccccccccccCCCcCCCccCCCCceECHHHHHHHHHHHHHhcCCCcEEEeCCCCCccccCCccccCccCC
Confidence 000 0 000001 0111333333333347888 6799999965321 1 136
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCccH-HHHHHHHHHHHhhccccccc
Q 014151 347 SLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTST-YKLLTEQSCGLGRISRLNLE 420 (430)
Q Consensus 347 ~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 420 (430)
..|.+|++.++.++.+++++|..+.|++.|++.|+ .+|..||+ +++.|-..+ .+..|+++..++.+-.+|.+
T Consensus 440 ~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSliDn--few~~Gy~kRfGliyVD~~~~~~R~~K~S~~wy~~vi~~N~~ 516 (540)
T 4a3y_A 440 SMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDN--FEWGEGYGVRFGIIHIDYNDNFARYPKDSAVWLMNSFHKNIS 516 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEESCSBCC--CCGGGTTSSCCCSEEEETTTTTEEEECHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEeecChhHh--hChhhhccCccceEEEcCCCCcccceecHHHHHHHHHHHcCC
Confidence 78999999999999999999999999999999998 78877765 333221123 36778888888777555543
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=192.13 Aligned_cols=302 Identities=16% Similarity=0.254 Sum_probs=196.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|+.|+ +. +|++++|.. |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 86 ~YhrykEDi~Lm~elG~~~yRf---SI-sWsRI~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~H-wD------ 154 (505)
T 3ptm_A 86 SYHLYKEDVRLMKDMGMDAYRF---SI-SWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFH-WD------ 154 (505)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred HHHHHHHHHHHHHHcCCCEEEe---ec-cHHHcCcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-CC------
Confidence 3678999999999999999998 43 599999976 7899999999999999999999999999986 64
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------- 219 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------- 219 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+..
T Consensus 155 -lP~~L~~~yGG---------W~nr~~v~~F~~YA~~~f~~--------fgD--rVk~W~T~NEp~~~~~~gy~~G~~~P 214 (505)
T 3ptm_A 155 -SPQALEDKYNG---------FLSPNIINDFKDYAEICFKE--------FGD--RVKNWITFNEPWTFCSNGYATGLFAP 214 (505)
T ss_dssp -CBHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTT
T ss_pred -CcHHHHHhcCC---------cCCHHHHHHHHHHHHHHHHH--------hCc--cCceEEEecCcchhhhccccccccCC
Confidence 25676652 53 88999999999999999999 998 688899999997421
Q ss_pred -CCC-------------hHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc---------
Q 014151 220 -DPS-------------GDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE--------- 267 (430)
Q Consensus 220 -~~~-------------~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~--------- 267 (430)
..+ .+.++.- .....+.+|+.. |+-.|.+-....+.. |.. .+|.
T Consensus 215 g~~~~~~~~~~~~g~~~~~~~~a~hh~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~--P~~--~~~~D~~Aa~~~~ 290 (505)
T 3ptm_A 215 GRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFV--PFS--RSKSNNDAAKRAI 290 (505)
T ss_dssp CCCCTTSTTCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEE--ESS--SSHHHHHHHHHHH
T ss_pred cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEecCceee--cCC--CCHHHHHHHHHHH
Confidence 000 1222222 224445567665 455554322111110 100 0111
Q ss_pred ----chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---C--C-c--ch----------
Q 014151 268 ----MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---H--D-L--EF---------- 304 (430)
Q Consensus 268 ----~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~--~-~--~~---------- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... + . . .+
T Consensus 291 ~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~ik-~~~DFiGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~ 369 (505)
T 3ptm_A 291 DFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVK-GAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTG 369 (505)
T ss_dssp HHHTHHHHHHHHTSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEECCCEEEEEECCCCCSSCCCHHHHTCEEEES
T ss_pred HHHhhhhhhheecccCCHHHHHHHhhcCCCCCHHHHHHhc-CCCCEEEEeccccceEecCCCCCccccCccccccceeec
Confidence 0100 0110 000 0112 4589999999964210 0 0 0 00
Q ss_pred ---------hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHH
Q 014151 305 ---------EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 305 ---------~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~ 364 (430)
.....| ...-|+..+....+.+++| |+|+|.|+..... ...+..|..|++.++.++.+++
T Consensus 370 ~~~~~~~~~~t~~~W~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~~~i~D~~Ri~Yl~~hl~~~~~Ai 449 (505)
T 3ptm_A 370 VRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAI 449 (505)
T ss_dssp EETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcCCCcCCCCCceeCHHHHHHHHHHHHHHcCCCcEEEeCCCCCcCCCcccCccCccCCHHHHHHHHHHHHHHHHHH
Confidence 000111 0111344444443347776 9999999976532 1236799999999999999999
Q ss_pred hcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 365 KRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 365 ~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
++|..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+
T Consensus 450 ~dGv~v~GY~~WSl~Dn--feW~~Gy~~RfGlvyVD~~~~~~R~~K~S~~wy~~v 502 (505)
T 3ptm_A 450 RDGANVKGYFAWSLLDN--FEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKF 502 (505)
T ss_dssp HTTCCEEEEEEECSBCC--CCGGGTTSEECCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred HCCCCEEEEEEeecccc--chhhcCcCCccceEEEcCCCCcceeeccHHHHHHHH
Confidence 99999999999999998 88988876 23222111 236667766666543
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=186.38 Aligned_cols=302 Identities=16% Similarity=0.158 Sum_probs=195.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 75 ~Y~~~~eDi~lm~~lG~~~~R~---si-sWsRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H-~d------ 143 (501)
T 1e4m_M 75 SFSYWQKDIDVLDELNATGYRF---SI-AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFH-WD------ 143 (501)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred HHHHHHHHHHHHHHhCCCeEEc---cc-cHHhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-Cc------
Confidence 3578999999999999999999 43 599999987 8999999999999999999999999999985 53
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------- 219 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------- 219 (430)
.|.|.... |+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+..
T Consensus 144 -~P~~L~~~ygg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~P 203 (501)
T 1e4m_M 144 -LPQTLQDEYEG---------FLDPQIIDDFKDYADLCFEE--------FGDS--VKYWLTINQLYSVPTRGYGSALDAP 203 (501)
T ss_dssp -CBHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEESCTTHHHHHHHTSCSSTT
T ss_pred -CCHHHHHhcCC---------CCCchHHHHHHHHHHHHHHH--------hCCC--CCEEEEecCchhhhccccccCccCC
Confidence 25676543 42 77889999999999999999 9986 89999999998521
Q ss_pred -CCC-------------hHHHHHH------HHHHHHHHHhcCC--CCEEEEccCCccCCCCCCCcccCc-c---------
Q 014151 220 -DPS-------------GDTLQDW------IDEMSAFVKSIDK--KHLVTVGLEGFYGPKSPKRLTVNP-E--------- 267 (430)
Q Consensus 220 -~~~-------------~~~~~~w------~~~~~~~Ir~~dp--~~lV~~G~~g~~~~~~~~~~~~np-~--------- 267 (430)
..+ ...++.- .....+.+|+..| +-.|.+-....+.. |.. .+| .
T Consensus 204 g~~~~~~~~~~~~~~~~~~~~~a~hh~llAha~Av~~~r~~~~~~~~~IGi~l~~~~~~--P~~--~~~~~D~~aa~r~~ 279 (501)
T 1e4m_M 204 GRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFL--PYN--DTDRHSIAATERMK 279 (501)
T ss_dssp CCCCTTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHSGGGCCEEECEEEEEEEE--ESS--TTCHHHHHHHHHHH
T ss_pred cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCCeee--cCC--CCcHHHHHHHHHHH
Confidence 000 1122221 2344556777654 44443322111100 000 012 1
Q ss_pred ----chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---CC----c------c----h-
Q 014151 268 ----MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---HD----L------E----F- 304 (430)
Q Consensus 268 ----~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~----~------~----~- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... +. . + .
T Consensus 280 ~~~~~~fldp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DFiGiNyY~s~~v~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
T 1e4m_M 280 EFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVK-GSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLT 358 (501)
T ss_dssp HHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSSEEEEEEEEEEEEECCCCTTSTTCCGGGGGCEEEE
T ss_pred HHHHHHhhhHhhCCCCCHHHHHHHHhhCCCCCHHHHHHhC-CCCCEEEEECccCeEEecCCCccccCcccccCCCCcccc
Confidence 1110 0110 000 0122 4589999999964210 00 0 0 0
Q ss_pred ----------h-hhH------HH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-----CChhHHHHHHHHHHH
Q 014151 305 ----------E-DDL------KF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-----FEPSLRDKLYKTILD 358 (430)
Q Consensus 305 ----------~-~~~------~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-----~~~~~r~~~~~~~~~ 358 (430)
+ ... .| ...-|+..+....+.+++| |+|+|.|+...... ..+..|..|++.++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~W~~i~P~GL~~~L~~i~~rY~~Ppi~ITENG~~~~d~~~~~g~v~D~~Ri~Yl~~hl~ 438 (501)
T 1e4m_M 359 YINASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLC 438 (501)
T ss_dssp SBCTTSCBCSSEEECCSSCGGGCEECCTHHHHHHHHHHHHHTTSCCEEEEECCCCEETTSCHHHHHCCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCcccccccccCCCceeCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCcCccCCcCCHHHHHHHHHHHH
Confidence 0 000 11 1122344444443347887 99999999764311 135799999999999
Q ss_pred HHHHHHh-cCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 359 IVYKSAK-RKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 359 ~~~~~~~-~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
.+.++++ ++..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+
T Consensus 439 ~~~~Ai~~dGv~v~GY~~WSliDn--feW~~Gy~~RfGliyVD~~~~~~R~~K~S~~wy~~v 498 (501)
T 1e4m_M 439 FLNKVIKEKDVNVKGYLAWALGDN--YEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSF 498 (501)
T ss_dssp HHHHHHHHHCCCEEEEEEECSBCC--CBTTTBTSEECCSEEEETTEEEEEEECHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEEcccccc--cchhccccccCCeEEeCCCCCCceeeccHHHHHHHH
Confidence 9999998 8999999999999998 78988876 33222111 235667776666554
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.9e-20 Score=189.41 Aligned_cols=302 Identities=15% Similarity=0.229 Sum_probs=195.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 68 ~YhrY~eDi~lm~elG~~~yRf---sI-~WsRI~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~d-------l 135 (488)
T 3gnp_A 68 QYHRFEEDIQLMADMGMDAYRF---SI-AWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH-WD-------L 135 (488)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEE---EC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhhhHHHHHHHHHHcCCCEEEe---cc-cHHHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCC-CC-------C
Confidence 3578999999999999999999 33 599999988 8999999999999999999999999999986 53 2
Q ss_pred hhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------C
Q 014151 154 VNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------D 220 (430)
Q Consensus 154 ~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~ 220 (430)
|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+.. .
T Consensus 136 P~~L~~~yGG---------W~n~~~v~~F~~Ya~~~~~~--------fgd--~Vk~W~T~NEp~~~~~~gy~~G~~~Pg~ 196 (488)
T 3gnp_A 136 PQALEDKYKG---------WLDRQIVDDFAAYAETCFRE--------FGD--RVKHWITLNEPHTVAIQGYDAGLQAPGR 196 (488)
T ss_dssp BHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTTCC
T ss_pred CHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--CCCEEEEccCcchhhhhchhcccCCccc
Confidence 5676542 43 78899999999999999999 998 688899999997421 0
Q ss_pred CC-------------hHHHHHHH------HHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-----------
Q 014151 221 PS-------------GDTLQDWI------DEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE----------- 267 (430)
Q Consensus 221 ~~-------------~~~~~~w~------~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~----------- 267 (430)
.+ .+.++.-. ....+.+|+.. |+-.|.+-....+. .|.. .+|.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~--~P~~--~~~~D~~Aa~~~~~~ 272 (488)
T 3gnp_A 197 CSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWF--EPMS--NTTIDIEAAKRAQEF 272 (488)
T ss_dssp CCTTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEE--EESS--SSHHHHHHHHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCcce--ecCC--cCHHHHHHHHHHHHH
Confidence 00 12222222 23445567765 45555432211110 0100 0111
Q ss_pred --chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---CCc----ch-------------
Q 014151 268 --MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---HDL----EF------------- 304 (430)
Q Consensus 268 --~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~~----~~------------- 304 (430)
.|.. ..|. .|. ..+. ..+||+++++|..... +.. ..
T Consensus 273 ~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~-~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (488)
T 3gnp_A 273 QLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVK-GALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLP 351 (488)
T ss_dssp HTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEECCCEEEEEECCCCCCTGGGCCHHHHHTEEEES
T ss_pred hhhhhhcceeCcccCHHHHHHHHhcCCCCCHHHHHhcC-CCCCEEEEecccCceeccCCCCcccccccccccCccccccc
Confidence 0100 0010 000 0112 4689999999964210 000 00
Q ss_pred --------h-hhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCC-------CCChhHHHHHHHHHHHHHHHHH
Q 014151 305 --------E-DDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIK-------GFEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 305 --------~-~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~-------~~~~~~r~~~~~~~~~~~~~~~ 364 (430)
+ ....| ...-|+..+....+.+++| |+|+|.|+..... ...+..|..|++.++.++.+++
T Consensus 352 ~~~~~~~~~~t~~~W~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai 431 (488)
T 3gnp_A 352 FKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASI 431 (488)
T ss_dssp EETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHHTSCCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcCCCCCceEcHHHHHHHHHHHHHHcCCCCEEEECCCcCcCCCccccccCccCCHHHHHHHHHHHHHHHHHH
Confidence 0 00011 1111334443333336665 9999999976532 1236799999999999999999
Q ss_pred -hcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 365 -KRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 365 -~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
++|..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+
T Consensus 432 ~~dGv~v~GY~~WSl~Dn--feW~~Gy~~RfGliyVD~~~~~~R~~K~S~~wy~~v 485 (488)
T 3gnp_A 432 KEDGCDVRGYFAWSLLDN--WEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKAL 485 (488)
T ss_dssp HTTCCCEEEEEEECSBCC--CCGGGGGGEECCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred HhcCCCEEEEEecccchh--hhhhccccCccceEEEcCCCCcceeeccHHHHHHHH
Confidence 88999999999999998 88888776 22222111 236666666666543
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.1e-21 Score=194.12 Aligned_cols=305 Identities=16% Similarity=0.250 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC--CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP--GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p--g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
..++++|++.|+++|+|++|+ +. +|++++|.+ |.+|+++++.+|++|+.+.++||.++++|++ |+ .
T Consensus 56 Y~~~~eDi~lm~~~G~~~~R~---si-sWsRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H-~d-------~ 123 (469)
T 2e9l_A 56 YTLWEEDLKCIKQLGLTHYRF---SL-SWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYH-FD-------L 123 (469)
T ss_dssp TTCHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred HHHHHHHHHHHHHhCCCeEEc---cc-cHhhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CC-------C
Confidence 567899999999999999999 33 599999988 8999999999999999999999999999975 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CC
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DP 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |+++ |..|.+.|||.+.. ..
T Consensus 124 P~~l~~~gg---------w~~r~~~~~f~~ya~~~~~~--------~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~ 184 (469)
T 2e9l_A 124 PQTLEDQGG---------WLSEAIIESFDKYAQFCFST--------FGDR--VKQWITINEANVLSVMSYDLGMFPPGIP 184 (469)
T ss_dssp BHHHHHTTG---------GGSTHHHHHHHHHHHHHHHH--------HTTT--CCEEEEESCHHHHHHHHHTSCCSTTCCC
T ss_pred CcchhhcCC---------CCCchHHHHHHHHHHHHHHH--------hcCc--CCEEEEccCcchhhcccccccccCCCcC
Confidence 567755442 77899999999999999999 9986 99999999997421 00
Q ss_pred C--hHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCcc-------------chhh---cc-
Q 014151 222 S--GDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---AL- 273 (430)
Q Consensus 222 ~--~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~- 273 (430)
+ ...++.- .....+.+|+.. |+-.|.+-....+.. |.. ..+|. .|.. ..
T Consensus 185 ~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~~~~IGi~l~~~~~~--P~~-~~~p~D~~aa~~~~~~~~~~f~dp~~~~ 261 (469)
T 2e9l_A 185 HFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLE--PAD-PNSVSDQEAAKRAITFHLDLFAKPIFID 261 (469)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEECEEEEEEEE--ESS-TTCHHHHHHHHHHHHHHTHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEEEecCCccc--CCC-CCCHHHHHHHHHHHHHHhhHHHHHHhcC
Confidence 1 1222221 234445667754 544443221111100 000 00111 1100 01
Q ss_pred Cc------------------------chh----hccCCCCcceEEeeecCCCCC-----C--Ccch--h-----------
Q 014151 274 GS------------------------DFI----RNSNNDNIDFASVHIYPDHWF-----H--DLEF--E----------- 305 (430)
Q Consensus 274 g~------------------------df~----~~~~~~~iD~~s~H~Y~~~w~-----~--~~~~--~----------- 305 (430)
|. .|. ..+. ..+||+++++|..... + .... .
T Consensus 262 G~YP~~~~~~~~~~~~~~g~~~~~~p~~~~~d~~~i~-~~~DflGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 340 (469)
T 2e9l_A 262 GDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIK-GTADFFAVQYYTTRLIKYQENKKGELGILQDAEIEFFPDPSW 340 (469)
T ss_dssp SSCCHHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHT-TCCSSEEEEEEEEEEEEECCCTTCCCSHHHHHTEEEECCTTC
T ss_pred CCCCHHHHHHHHHhhhhcccccccCCCCCHHHHHHhc-CCCCEEEeecccceEEecCCCCCCCCCccCCcccccccCCCC
Confidence 21 000 0012 3589999999964211 0 0000 0
Q ss_pred hhHHH---HHHHHHHHHHhhhhcCCC-cEEEEecCCCCCC-CCCChhHHHHHHHHHHHHHHHHHh-cCCCcccceeeeec
Q 014151 306 DDLKF---VTKWMLSHIEDGDKELNK-PVFFTEYGLSNLI-KGFEPSLRDKLYKTILDIVYKSAK-RKRSGAGALIWQLF 379 (430)
Q Consensus 306 ~~~~~---~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~G~~~W~~~ 379 (430)
....| ...-|+..+....+.+++ ||+|+|.|+..+. ....+..|..|++.++..+.++++ ++..+.|++.|++.
T Consensus 341 t~~gW~~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~d~~~~v~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~ 420 (469)
T 2e9l_A 341 KNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDPAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLL 420 (469)
T ss_dssp CEETTEECCTHHHHHHHHHHHHHTTSCCEEEEEECCCEESSCCSSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSB
T ss_pred CCCCccccChHHHHHHHHHHHHHhCCCCEEEEecCCCCCcccccCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 00001 111234444443334777 5999999997311 123468999999999999999998 89999999999999
Q ss_pred cCCCccCCCCce----EEcCC--CccHHHHHHHHHHHHhhcccc
Q 014151 380 VEGMEEYNDDFG----IVPWE--RTSTYKLLTEQSCGLGRISRL 417 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~--~~~~~~~~~~~~~~~~~~~~~ 417 (430)
|+ .+|..||+ +++.| +++..+..|+++..++.+-..
T Consensus 421 Dn--~eW~~gy~~RfGli~VD~~~~~~~R~~K~S~~wy~~vi~~ 462 (469)
T 2e9l_A 421 DN--FEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRN 462 (469)
T ss_dssp CC--CCGGGGGGEECCSEEECTTSTTCCEEECHHHHHHHHHHHH
T ss_pred cc--cchhcccCCcCceEEecCCCCccceeechHHHHHHHHHHh
Confidence 98 77888776 33322 111346677777777766433
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=186.10 Aligned_cols=303 Identities=17% Similarity=0.228 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC-----------------------------CCCChHHHHHHHHHH
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP-----------------------------GQFDERVFKALDHVI 126 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p-----------------------------g~~de~~l~~lD~~l 126 (430)
..++++|++.|++||+|+.|+ +. +|+++.|.. +..|+++++.++++|
T Consensus 60 yh~y~eDi~l~~~mG~~~yRf---SI-sWsRI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~li 135 (489)
T 4ha4_A 60 WGNYRKFHDAAQAMGLTAARI---GV-EWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMF 135 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEe---ec-cHHhcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 467899999999999999998 33 588888753 346899999999999
Q ss_pred HHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 127 VEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE-----GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 127 ~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~-----G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
+++.++||.+++||++ |+. |.|.++. |. + ....=|.|+++.+.|.+|.+.+.+| |+
T Consensus 136 d~Ll~~GIeP~VTL~H-~Dl-------P~~L~d~~~~~~g~-~--~~~GGW~n~~~v~~F~~YA~~~f~~--------fg 196 (489)
T 4ha4_A 136 SDLRSRGITFILNLYH-WPL-------PLWLHDPIAIRRGN-L--SAPSGWLDVRTVIEFAKFSAYVAWK--------LD 196 (489)
T ss_dssp HHHHHTTCEEEEESCS-SCC-------BTTTBCHHHHHTTC-T--TSCBGGGSHHHHHHHHHHHHHHHHH--------HG
T ss_pred HHHHHcCCeeeEeecC-CCc-------hHHHhhhhcccccc-c--ccCCCCCCHHHHHHHHHHHHHHHHH--------hC
Confidence 9999999999999986 642 4454320 10 0 0001178999999999999999999 98
Q ss_pred CCCceeEEeecCCCCCCC-----------CC---Ch-H------HHHHHHHHHHHHHHhcCCCCE-EEEccCCccCCCCC
Q 014151 202 NDPTIFAWELINEPRCMS-----------DP---SG-D------TLQDWIDEMSAFVKSIDKKHL-VTVGLEGFYGPKSP 259 (430)
Q Consensus 202 ~~p~I~~wel~NEp~~~~-----------~~---~~-~------~~~~w~~~~~~~Ir~~dp~~l-V~~G~~g~~~~~~~ 259 (430)
+ .|--|.+.|||.+.. .+ +. . .+..-..+..+.+|+..+... +++... .+-..++
T Consensus 197 d--rVk~W~T~NEp~~~~~~gy~~~~~~~~p~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~iGi~~~~~-~~~P~~~ 273 (489)
T 4ha4_A 197 D--LVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGRAMKNLVQAHARAYDAVKAITKKPVGVIYANS-DFTPLTD 273 (489)
T ss_dssp G--GCSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEE-EEEESSG
T ss_pred C--ccceEEEeccchhhhcccccccccCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc-ccccccc
Confidence 8 688899999996421 00 11 1 111123345566788877643 222111 1110000
Q ss_pred CCcccCcc----------chhhc----cCc--chhhccCCCCcceEEeeecCCCC--------------CCCc-------
Q 014151 260 KRLTVNPE----------MWASA----LGS--DFIRNSNNDNIDFASVHIYPDHW--------------FHDL------- 302 (430)
Q Consensus 260 ~~~~~np~----------~w~~~----~g~--df~~~~~~~~iD~~s~H~Y~~~w--------------~~~~------- 302 (430)
.+. .|... .|. ..........+||+++++|.... ....
T Consensus 274 -----~d~~aa~~~~~~~~~~f~d~~~~g~~p~~~~~~lk~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 348 (489)
T 4ha4_A 274 -----ADREAAERAKFDNRWAFFDAVVRGQLGGSTRDDLKGRLDWIGVNYYTRQVVRARGSGYEIVPGYGHGCEPNGVSP 348 (489)
T ss_dssp -----GGHHHHHHHHHHHTHHHHHHHHHCEETTEECTTTTTCCSCEEEEEEEEEEEEEETTEEEECTTSTTSSCTTCBCT
T ss_pred -----hhHHHHHHHHHhhcccccChhhcCcCCcccchhccccccccccccccceeeecCCCccccCcccccccccccccc
Confidence 010 11100 000 00011123568999999994210 0000
Q ss_pred -chh-hhHHH--HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeee
Q 014151 303 -EFE-DDLKF--VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL 378 (430)
Q Consensus 303 -~~~-~~~~~--~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~ 378 (430)
..+ ....| ...-|+..+....+.+++||+|+|.|+...+ +..|..|++.++.++.++++++..+.|++.|++
T Consensus 349 ~~~~~t~~gw~i~P~Gl~~~L~~~~~rY~~Pi~ITENG~~~~~----D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl 424 (489)
T 4ha4_A 349 AGRPCSDFGWEFYPEGLYNVLKEYWDRYHLPLLVTENGIADEG----DYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSL 424 (489)
T ss_dssp TSCBBCTTSCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCTT----CSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCS
T ss_pred CCCccCCCCceeccHHHHHHHHHHHhhcCCCEEEecCCCCCCC----ChHHHHHHHHHHHHHHHHHHCCCCEEEEeecCc
Confidence 000 00000 0111223333332237899999999997654 568999999999999999999999999999999
Q ss_pred ccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhcc
Q 014151 379 FVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 379 ~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~ 415 (430)
.|+ .+|..||+ +++.|-.+..+..|+++..++.+-
T Consensus 425 ~Dn--fEW~~Gy~~RfGliyVD~~t~~R~~K~S~~wy~~vi 463 (489)
T 4ha4_A 425 ADN--YEWASGFSKRFGLLMVDYSTKRLHWRPSAFIYREIA 463 (489)
T ss_dssp BCC--CCGGGGGGSCCCSEEECTTTCCEEECHHHHHHHHHH
T ss_pred hhh--hchhhccccccceEEEeCCCCCeeeccHHHHHHHHH
Confidence 998 78877765 444331222355677777777663
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=189.58 Aligned_cols=183 Identities=15% Similarity=0.189 Sum_probs=141.6
Q ss_pred CCCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChH
Q 014151 38 EMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDER 117 (430)
Q Consensus 38 ~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~ 117 (430)
+...|+++++.|++||||+.+.|.|.|+... .++.++++|+.||++|+|+||+++| |..++|.||+||.+
T Consensus 4 ~~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~------~~e~w~~dl~~mK~~G~N~Vrt~v~----W~~hEP~~G~ydf~ 73 (612)
T 3d3a_A 4 SEGTFEVGKNTFLLNGEPFVVKAAEIHYPRI------PKEYWEHRIKMCKALGMNTICLYVF----WNFHEPEEGRYDFA 73 (612)
T ss_dssp CCCCEEECSSSEEETTEEECCEEEEECGGGS------CGGGHHHHHHHHHHHTCCEEEEECC----HHHHCSSTTCCCCS
T ss_pred ccceEEEeCCEEEECCEEEEEEEEEecCccC------CHHHHHHHHHHHHHcCCCEEEEcCh----HHhcCCCCCccChh
Confidence 3567899999999999999999999886542 3689999999999999999999876 77889999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEEecc----CCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLV----NNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~----~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
.++.+++++++|+++||+||+.+. ..|. .||. |.|...... ...--.||..+++++++++.|++|
T Consensus 74 gl~~l~~fl~la~e~GL~VIl~~gpyi~~ew~-~gG~---P~Wl~~~~~-----~~~r~~dp~y~~~~~~~~~~l~~r-- 142 (612)
T 3d3a_A 74 GQKDIAAFCRLAQENGMYVIVRPGPYVCAEWE-MGGL---PWWLLKKKD-----IKLREQDPYYMERVKLFLNEVGKQ-- 142 (612)
T ss_dssp GGGCHHHHHHHHHHTTCEEEEECCSCCCTTBG-GGGC---CGGGGGSTT-----CCSSSCCHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCcccccccc-cCCC---chhhccCCC-----ceecCCCHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999763 3353 4554 567643210 011124699999999999999999
Q ss_pred CcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcC-CCCEEE
Q 014151 194 TITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID-KKHLVT 247 (430)
Q Consensus 194 ~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d-p~~lV~ 247 (430)
+.+..++++|+|++|++.||+.+... -.+.++.+.+.+|+.+ ++.+..
T Consensus 143 -~~~~~~~n~p~II~wqIeNEyg~yg~-----~~~y~~~l~~~l~~~g~~~vp~~ 191 (612)
T 3d3a_A 143 -LADLQISKGGNIIMVQVENEYGAFGI-----DKPYISEIRDMVKQAGFTGVPLF 191 (612)
T ss_dssp -HGGGBGGGTSSEEEEECSSCGGGTCC-----CHHHHHHHHHHHHHHTCCSSCEE
T ss_pred -HhhhhhccCCCEEEEeecccccccCc-----hHHHHHHHHHHHHHcCCCchhhe
Confidence 22233346999999999999975321 1244566677788887 465543
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.2e-20 Score=189.17 Aligned_cols=302 Identities=15% Similarity=0.224 Sum_probs=194.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC---CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP---GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p---g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|++|+ +. +|++++|.. |.+|+++++.+|++|+.+.++||.++++|++ |+
T Consensus 74 ~YhrYkEDi~Lm~elG~~~yRf---SI-sWsRI~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H-~d------ 142 (513)
T 4atd_A 74 SYHLYKEDVNILKNLGLDAYRF---SI-SWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFH-WD------ 142 (513)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hHHHHHHHHHHHHHcCCCEEEE---eC-cHHHcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecC-CC------
Confidence 3678999999999999999998 33 599999886 7899999999999999999999999999986 64
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----------
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------- 219 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------- 219 (430)
.|.|.... |+ |.++++.+.|.+|.+.+++| |++ .|--|.+.|||.+..
T Consensus 143 -lP~~L~~~yGG---------W~nr~~v~~F~~YA~~~f~~--------fgd--rVk~WiT~NEp~~~~~~gy~~G~~aP 202 (513)
T 4atd_A 143 -VPQALEDEYGG---------FLSPRIVDDFCEYAELCFWE--------FGD--RVKHWMTLNEPWTFSVHGYATGLYAP 202 (513)
T ss_dssp -CBHHHHHHHCG---------GGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTT
T ss_pred -CcHHHHHHcCC---------cCCHHHHHHHHHHHHHHHHH--------hcC--cCceEEEccCcchhhccccccccCCC
Confidence 25676543 53 78899999999999999999 998 588899999997410
Q ss_pred -C----------------CC--------------hHHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccCCC-C
Q 014151 220 -D----------------PS--------------GDTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYGPK-S 258 (430)
Q Consensus 220 -~----------------~~--------------~~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~-~ 258 (430)
. .+ .+.++.- .....+.+|+.. |+-.|.+-....+..+ .
T Consensus 203 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~H~~llAHa~Av~~~r~~~~~~~~g~IGi~l~~~~~~P~~ 282 (513)
T 4atd_A 203 GRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWD 282 (513)
T ss_dssp CCCCC-------------------------CCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEEEEEEEESS
T ss_pred CcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCCceEEEEeecceeccCC
Confidence 0 00 1112221 123445567654 4545543221111100 0
Q ss_pred CCCcccCcc-------------chhh---ccCc--------------chh----hccCCCCcceEEeeecCCCCC---CC
Q 014151 259 PKRLTVNPE-------------MWAS---ALGS--------------DFI----RNSNNDNIDFASVHIYPDHWF---HD 301 (430)
Q Consensus 259 ~~~~~~np~-------------~w~~---~~g~--------------df~----~~~~~~~iD~~s~H~Y~~~w~---~~ 301 (430)
+ .+|. .|.. ..|. .|. ..+. ..+||+++++|..... +.
T Consensus 283 ~----~~~~D~~Aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~ik-~~~DFiGiNyYts~~v~~~~~ 357 (513)
T 4atd_A 283 E----NSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLK-GSYDFVGLNYYTASYVTNAST 357 (513)
T ss_dssp T----TCHHHHHHHHHHHHHHTHHHHTHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHT-TCCSEEEEEEEEEEEEEECC-
T ss_pred C----CCHHHHHHHHHHHHHhhhccccceeccccCHHHHHHHHhcCCCCCHHHHHhcc-CCCcEEEEeccccceeccCCC
Confidence 0 0111 0110 0010 000 0112 3589999999953210 00
Q ss_pred --c-----ch------------------h-hhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-------C
Q 014151 302 --L-----EF------------------E-DDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-------F 344 (430)
Q Consensus 302 --~-----~~------------------~-~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-------~ 344 (430)
. .. + ....| ...-|+..+....+.+++| |+|+|.|+...... .
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~t~~gW~~i~P~GL~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~~~~~~i 437 (513)
T 4atd_A 358 NSSGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEAR 437 (513)
T ss_dssp ------CCCHHHHTCEEEECEETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHHCCSSEEEEEECCCCCCCTTCCHHHHT
T ss_pred CccccccCCcccccceeeecccCCCCCCCcCCCCCCeecHHHHHHHHHHHHHHcCCCcEEEeCCCCCccCccccCCCCcc
Confidence 0 00 0 00011 1111344444443336766 99999999875421 2
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCcc-HHHHHHHHHHHHhhc
Q 014151 345 EPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTS-TYKLLTEQSCGLGRI 414 (430)
Q Consensus 345 ~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~-~~~~~~~~~~~~~~~ 414 (430)
.+..|..|++.++.++.+++++|..+.|++.|++.|+ .+|..||+ +++.|-.+ ..+..|+++..++.+
T Consensus 438 ~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn--fEW~~Gy~~RfGliyVD~~~~~~R~pK~S~~wy~~v 510 (513)
T 4atd_A 438 KDSMRLKYLQDHIFNVRQAMNDGVNVKGYFAWSLLDN--FEWGEGYGVRFGIIHIDYNDNFARYPKDSAVWLMNS 510 (513)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBCC--CCGGGTTSSCCCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHHCCCCEEEEEEcccccc--hhhhccccCccceEEEcCCCCcceeeccHHHHHHHH
Confidence 3678999999999999999999999999999999998 78877765 33322111 235666666665543
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.7e-19 Score=192.27 Aligned_cols=210 Identities=13% Similarity=0.127 Sum_probs=158.6
Q ss_pred CcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHH
Q 014151 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVF 119 (430)
Q Consensus 40 gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l 119 (430)
.-|+.++..|++||||+++.|..+|+.... .++.|+++|+.||++|+|+||+++| |..+||.||+||.+..
T Consensus 4 ~~v~~d~~~~~idG~p~~l~sG~~hy~r~p-----~~~~W~d~l~kmka~G~NtV~~yvf----W~~hEP~~G~fdF~g~ 74 (971)
T 1tg7_A 4 KYVTWDEHSIFVNGERLMIFSGEVHPYRLP-----VASLYIDIFEKVKALGFNCVSFYVD----WALLEGNPGHYSAEGI 74 (971)
T ss_dssp SSEEECSSCEEETTEEECEEEEECCGGGSC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCCCGG
T ss_pred ceEEEcCCEEEECCeEEEEEEEEECcccCC-----chHHHHHHHHHHHHcCCCEEEEecc----HHHhCCCCCeecccch
Confidence 458899999999999999999998765432 2688999999999999999999887 7789999999997777
Q ss_pred HHHHHHHHHHHHcCCEEEEec----cCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 120 KALDHVIVEARKNGVRLLLSL----VNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l----~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
..||++|++|+++||+||+-. +..| .+||. |.|...... .--.+||.++++.++++++|++|
T Consensus 75 ~dL~~fl~~a~e~Gl~ViLr~GPyi~aE~-~~GG~---P~WL~~~p~------~lR~~~p~y~~~~~~~~~~l~~~---- 140 (971)
T 1tg7_A 75 FDLQPFFDAAKEAGIYLLARPGPYINAEV-SGGGF---PGWLQRVDG------ILRTSDEAYLKATDNYASNIAAT---- 140 (971)
T ss_dssp GCSHHHHHHHHHHTCEEEEECCSCCCTTB-GGGGC---CGGGGGCSS------CTTSSCHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCEEEEecCCccccee-cCCCc---ceeecccCC------EecCCCHHHHHHHHHHHHHHHHH----
Confidence 779999999999999999954 3345 35665 678754211 11156899999999999999999
Q ss_pred ccccccCCC-----ceeEEeecCCCCCCC-CCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccch
Q 014151 196 TGVEYRNDP-----TIFAWELINEPRCMS-DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMW 269 (430)
Q Consensus 196 tg~~yk~~p-----~I~~wel~NEp~~~~-~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w 269 (430)
++.++ .|++|++.||..+.. +.-.+...++++.+++.+|+.+++.++++...+..... .+.
T Consensus 141 ----~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~-------~~~-- 207 (971)
T 1tg7_A 141 ----IAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHN-------APG-- 207 (971)
T ss_dssp ----HHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTT-------CTT--
T ss_pred ----HhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCCeeEEEecCcccccc-------ccc--
Confidence 66555 999999999997642 11012356777778888999999999877532211100 111
Q ss_pred hhccCcchhhccCCCCcceEEeeecCC
Q 014151 270 ASALGSDFIRNSNNDNIDFASVHIYPD 296 (430)
Q Consensus 270 ~~~~g~df~~~~~~~~iD~~s~H~Y~~ 296 (430)
.....+|+++.-.||.
T Consensus 208 -----------~~~g~ldv~~~D~Yp~ 223 (971)
T 1tg7_A 208 -----------TGAGAVDIYGHDSYPL 223 (971)
T ss_dssp -----------SCTTCCSBCEEEECTT
T ss_pred -----------cccCceeEEecCCCcc
Confidence 0135678889999985
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-18 Score=168.51 Aligned_cols=243 Identities=14% Similarity=0.152 Sum_probs=161.3
Q ss_pred HHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC--cccCCCcchhhhh
Q 014151 79 VGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN--LQAYGGKTQYVNW 156 (430)
Q Consensus 79 ~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~--w~~~gg~~~y~~W 156 (430)
.+++++.|+++|+|+||+-++ +.|.+|.+| ++.++.+++.|+++||+|+++||.. |.+.+ |
T Consensus 29 ~~~~~~ilk~~G~n~vRlri~-------v~P~~g~~d---~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~-------~ 91 (334)
T 1fob_A 29 TQALETILADAGINSIRQRVW-------VNPSDGSYD---LDYNLELAKRVKAAGMSLYLDLHLSDTWADPS-------D 91 (334)
T ss_dssp BCCHHHHHHHHTCCEEEEEEC-------SCCTTCTTC---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTT-------B
T ss_pred CchHHHHHHHcCCCEEEEEEE-------ECCCCCccC---HHHHHHHHHHHHHCCCEEEEEeccCCCCCCcc-------c
Confidence 356899999999999998332 235567777 7788999999999999999999743 54322 1
Q ss_pred hhhhCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC------CChHHHH
Q 014151 157 AWEEGIGISSSNDSFFF--DPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD------PSGDTLQ 227 (430)
Q Consensus 157 ~~~~G~~~~~~~~~f~~--d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~------~~~~~~~ 227 (430)
.. ....|-. -++..+.+.+|.+.++++ +++.. .+.+|+++||+..... ...+.+.
T Consensus 92 q~--------~p~~W~~~~~~~~~~~~~~yt~~v~~~--------l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~ 155 (334)
T 1fob_A 92 QT--------TPSGWSTTDLGTLKWQLYNYTLEVCNT--------FAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIG 155 (334)
T ss_dssp CB--------CCTTSCSSCHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHH
T ss_pred cc--------CccccccCChHHHHHHHHHHHHHHHHH--------HHhCCCCCCEEEEeecCcccccCCCCcchhHHHHH
Confidence 10 0111221 256889999999999999 88754 4667999999986321 1246788
Q ss_pred HHHHHHHHHHHhcC--CCCEEEEccCCccCCCCCCCcccCc-cchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCc
Q 014151 228 DWIDEMSAFVKSID--KKHLVTVGLEGFYGPKSPKRLTVNP-EMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDL 302 (430)
Q Consensus 228 ~w~~~~~~~Ir~~d--p~~lV~~G~~g~~~~~~~~~~~~np-~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~ 302 (430)
+.+++.+++||+++ |+..|++..+. +.. +. ..|... ..... .....+|++++|+||. |.+..
T Consensus 156 ~~~~~a~~avr~~~~~p~~~v~~h~~~------~~~---~~~~~~~~~---~~~~~g~~~~~~~DvIG~syYp~-w~~~~ 222 (334)
T 1fob_A 156 ALLHSGAWGVKDSNLATTPKIMIHLDD------GWS---WDQQNYFYE---TVLATGELLSTDFDYFGVSYYPF-YSASA 222 (334)
T ss_dssp HHHHHHHHHHHTSCCSSCCEEEEEESC------TTC---HHHHHHHHH---HHHHTSSSCGGGCCEEEEECCSS-SCTTC
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCC------cCc---hHHHHHHHH---HHHHcCCCCCCCcCEEEEeCCCC-cCCCC
Confidence 89999999999999 99888775421 000 00 011110 00000 0123689999999997 55322
Q ss_pred chhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC-------------CChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 303 EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG-------------FEPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 303 ~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~-------------~~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
..+ - +...++...+.++|||+|+|+|.....++ .+++.|..|++++++.+.+ ...
T Consensus 223 ~~~----~----l~~~l~~~~~rygKpv~itEtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~----~~~ 290 (334)
T 1fob_A 223 TLA----S----LKTSLANLQSTYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEA----TTD 290 (334)
T ss_dssp CHH----H----HHHHHHHHHHHHCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STT
T ss_pred CHH----H----HHHHHHHHHHHHCCCEEEEEcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHh----cCC
Confidence 221 1 22233333223899999999999875321 3577889999998887753 235
Q ss_pred cccceeeeec
Q 014151 370 GAGALIWQLF 379 (430)
Q Consensus 370 ~~G~~~W~~~ 379 (430)
+.|.++|.+.
T Consensus 291 ~~G~f~We~~ 300 (334)
T 1fob_A 291 GLGVYYWEPA 300 (334)
T ss_dssp EEEEEEECTT
T ss_pred ceEEEEECcc
Confidence 8999999974
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=167.87 Aligned_cols=272 Identities=15% Similarity=0.194 Sum_probs=170.8
Q ss_pred EEEeeecccccc---ccCCCCC-HHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHH
Q 014151 57 YVNGWNSYWLMD---HAVHDYS-RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARK 131 (430)
Q Consensus 57 ~~~G~N~~~~~~---~~~~~~~-~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~ 131 (430)
++.|++.-++.. .+....+ ....++.|+.|+++|+|+||+-++.+..+..-++ .+|.+| ++.+..++++|++
T Consensus 24 f~~G~Dis~~~~~e~~G~~y~~~~G~~~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d---~~~~~~~a~~Ak~ 100 (399)
T 1ur4_A 24 FIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNND---LEKAIQIGKRATA 100 (399)
T ss_dssp CEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCC---HHHHHHHHHHHHH
T ss_pred eEEEEehhhhHHHHHcCCeeeCCCCccchHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCC---HHHHHHHHHHHHH
Confidence 467888766532 1211111 1223567999999999999974332211100000 123344 7888899999999
Q ss_pred cCCEEEEeccC--CcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeE
Q 014151 132 NGVRLLLSLVN--NLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFA 208 (430)
Q Consensus 132 ~Gi~vil~l~~--~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~ 208 (430)
+||+|+|+||- .|.+.|.+..-..|.. .+.++..+.+.++.+.++++ +++.. .+-+
T Consensus 101 ~GLkVlldfHysD~WadPg~Q~~P~aW~~-------------~~~~~l~~~~~~yt~~~l~~--------l~~~g~~~~~ 159 (399)
T 1ur4_A 101 NGMKLLADFHYSDFWADPAKQKAPKAWAN-------------LNFEDKKTALYQYTKQSLKA--------MKAAGIDIGM 159 (399)
T ss_dssp TTCEEEEEECSSSSCCSSSCCCCCGGGTT-------------CCHHHHHHHHHHHHHHHHHH--------HHHTTCCEEE
T ss_pred CCCEEEEEeccCCccCCcccccCcccccc-------------CCHHHHHHHHHHHHHHHHHH--------HHhcCCCCcE
Confidence 99999999973 3554432211112321 12367888889999999998 87765 4568
Q ss_pred EeecCCCCCCCC--CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-chhhccCcchhhccCCCC
Q 014151 209 WELINEPRCMSD--PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-MWASALGSDFIRNSNNDN 285 (430)
Q Consensus 209 wel~NEp~~~~~--~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-~w~~~~g~df~~~~~~~~ 285 (430)
|+++||+..... ...+.+.+++++.+++||+++|+++|++....-.. +.. .|.. +.... ....
T Consensus 160 vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~---------~~~~~~~~----d~l~~-~g~d 225 (399)
T 1ur4_A 160 VQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET---------SGRYAWIA----ETLHR-HHVD 225 (399)
T ss_dssp EEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS---------TTHHHHHH----HHHHH-TTCC
T ss_pred EEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc---------hHHHHHHH----HHHHH-cCCC
Confidence 999999986331 13467888899999999999999988775421100 110 1211 11111 2246
Q ss_pred cceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC------------------CCChh
Q 014151 286 IDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK------------------GFEPS 347 (430)
Q Consensus 286 iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~------------------~~~~~ 347 (430)
+|++++|+||. |... . +- +...++...+.++|||+|+|+|...... ..+++
T Consensus 226 ~DvIG~syYp~-W~~~--l----~~----l~~~l~~l~~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s~~ 294 (399)
T 1ur4_A 226 YDVFASSYYPF-WHGT--L----KN----LTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQ 294 (399)
T ss_dssp CSEEEEEECTT-TSCC--H----HH----HHHHHHHHHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHH
T ss_pred cCeEeEecCcc-chhh--H----HH----HHHHHHHHHHHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCCHH
Confidence 99999999997 6532 1 11 2233333322389999999999987321 12567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeee--ecc
Q 014151 348 LRDKLYKTILDIVYKSAKRKRSGAGALIWQ--LFV 380 (430)
Q Consensus 348 ~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~--~~~ 380 (430)
.|.+|++.+++.+.+. +..+.|.++|. |.+
T Consensus 295 gQa~~l~~l~~~v~~~---~~~g~GvfyWep~w~~ 326 (399)
T 1ur4_A 295 GQANAVRDVIQAVSDV---GEAGIGVFYWEPAWIP 326 (399)
T ss_dssp HHHHHHHHHHHHHHTT---CTTEEEEEEECTTCCC
T ss_pred HHHHHHHHHHHHHHhc---cCceEEEEEEccceec
Confidence 8999999998876442 23478999998 544
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-19 Score=180.30 Aligned_cols=161 Identities=17% Similarity=0.186 Sum_probs=120.3
Q ss_pred CCCCCcEEEeCCeE--EECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCC
Q 014151 36 EPEMGFVTRNGTHF--MLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 36 ~~~~gfv~~~g~~f--~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
......++++++++ ++|||||++.|.+.|.... .....+++++.||++|+|+||+++. |..++|.||+
T Consensus 36 ~~~~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~------y~r~~~~~W~~mKa~G~NtVr~~V~----W~~hEP~~G~ 105 (552)
T 3u7v_A 36 DAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSSA------WPSQMAKVWPAIEKVGANTVQVPIA----WEQIEPVEGQ 105 (552)
T ss_dssp CCCCCEEEEETTEEEEEETTEEECEEEEECCTTCC------SGGGHHHHHHHHHHHTCSEEEEEEE----HHHHCSBTTB
T ss_pred cccCCeEEEECCeEEEEECCEEEEEEEEEeCCCCC------chhhhHHHHHHHHHhCCCEEEEEeh----hhccCCCCCc
Confidence 34567889998876 7899999999999874321 1344577788999999999999763 7788999999
Q ss_pred CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh-CCCC---CCC--C--CCCCCCHHH----HHHH
Q 014151 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE-GIGI---SSS--N--DSFFFDPSI----HKYF 181 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~-G~~~---~~~--~--~~f~~d~~~----~~~~ 181 (430)
|| |+.+|++|+.|+++||+||+.++..|. .||....|.|.... +.-+ +.. . ..-+.+|.+ ++.+
T Consensus 106 yD---F~~LD~~ldla~e~GL~VIL~i~aeW~-~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~ 181 (552)
T 3u7v_A 106 FD---FSYLDLLLEQARERKVRLVLLWFGTWK-NSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAF 181 (552)
T ss_dssp CC---CHHHHHHHHHHHHTTCEEEEEEEEEEE-TTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHH
T ss_pred cC---hhhHHHHHHHHHHCCCEEEEEeccccc-cCCCcCCCchhhcCcccCceeECCCCcEeecCCCCcHHHHHHHHHHH
Confidence 99 556999999999999999999888885 45544457888631 1100 000 0 001234555 6666
Q ss_pred HHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC
Q 014151 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM 218 (430)
Q Consensus 182 ~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~ 218 (430)
.+.++.|++| |+++|+|++|++.||+.+.
T Consensus 182 ~~l~~~La~r--------~~~~p~VI~wQIeNEyG~~ 210 (552)
T 3u7v_A 182 VALMTHLKAK--------DAAQKTVIMVQVENETGTY 210 (552)
T ss_dssp HHHHHHHHHH--------HTTTCCEEEEEEEESCSBS
T ss_pred HHHHHHHHHH--------hCCCCcEEEEEecccCCCC
Confidence 6777778888 9999999999999999865
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-17 Score=162.14 Aligned_cols=240 Identities=13% Similarity=0.156 Sum_probs=155.5
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC--CcccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN--NLQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~--~w~~~gg~~~y~~W~ 157 (430)
++.++.|+++|+|+||+-++ ..|.+|.++ ++.+++++++|+++||+|+++||- .|.+.|.+.
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w-------~~P~~g~~~---~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~------ 93 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVW-------VNPADGNYN---LDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQT------ 93 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEEC-------SSCTTCTTS---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCB------
T ss_pred ccHHHHHHHCCCCEEEEeee-------eCCCCCcCC---HHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccC------
Confidence 46789999999999999442 234456656 678999999999999999999974 354433211
Q ss_pred hhhCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHhccCCcccccccCC-CceeEEeecCCCCCCCC------CChHHHHH
Q 014151 158 WEEGIGISSSNDSFFFD--PSIHKYFKHYVKTVLTRKNTITGVEYRND-PTIFAWELINEPRCMSD------PSGDTLQD 228 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d--~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I~~wel~NEp~~~~~------~~~~~~~~ 228 (430)
.... |.+ ++..+.+.++.+.++++ +++. ..+..++++||+..... ...+.+.+
T Consensus 94 ---------~p~~-W~~~~~~~~~~~~~yt~~vl~~--------l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~ 155 (332)
T 1hjs_A 94 ---------MPAG-WPSDIDNLSWKLYNYTLDAANK--------LQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIAR 155 (332)
T ss_dssp ---------CCTT-CCCSHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHH
T ss_pred ---------Cccc-cccchHHHHHHHHHHHHHHHHH--------HHHcCCCCCEEEEeecccccccCcCCCccCHHHHHH
Confidence 0112 323 55677777888777777 5532 23556899999875210 13477889
Q ss_pred HHHHHHHHHHhcC--CCCEEEEccCCccCCCCCCCcccCc-cchhhccCcchhhc---cCCCCcceEEeeecCCCCCCCc
Q 014151 229 WIDEMSAFVKSID--KKHLVTVGLEGFYGPKSPKRLTVNP-EMWASALGSDFIRN---SNNDNIDFASVHIYPDHWFHDL 302 (430)
Q Consensus 229 w~~~~~~~Ir~~d--p~~lV~~G~~g~~~~~~~~~~~~np-~~w~~~~g~df~~~---~~~~~iD~~s~H~Y~~~w~~~~ 302 (430)
++++.+++||+.+ |+..|++..+.. .. +. ..|.. +-... .....+|++++|+||. |....
T Consensus 156 l~~~~~~avR~~~~~p~~~v~ih~~~~----~~-----~~~~~~~~----d~~~~~g~~~~~~~DvIG~syYp~-w~~~~ 221 (332)
T 1hjs_A 156 LLHSAAWGIKDSSLSPKPKIMIHLDNG----WD-----WGTQNWWY----TNVLKQGTLELSDFDMMGVSFYPF-YSSSA 221 (332)
T ss_dssp HHHHHHHHHHTSCCSSCCEEEEEESCT----TC-----HHHHHHHH----HHHHTTSSSCGGGCCEEEEECCSS-SCTTC
T ss_pred HHHHHHHHHHHhccCCCCeEEEEeCCc----cc-----hHHHHHHH----HHHHhcCCCCCCCcCEEEEecCcc-cCCCC
Confidence 9999999999999 998888754210 00 00 01111 00000 1123799999999996 65322
Q ss_pred chhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------------CCChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 303 EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------------GFEPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 303 ~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------------~~~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
.. +. +...++...+.++|||+|.|+|...... ..+++.|.++++.+++.+.+. +.
T Consensus 222 ~~----~~----l~~~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~----~~ 289 (332)
T 1hjs_A 222 TL----SA----LKSSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSV----SR 289 (332)
T ss_dssp CH----HH----HHHHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS----TT
T ss_pred CH----HH----HHHHHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhc----CC
Confidence 22 12 2222233222379999999999976421 135778999999988766442 24
Q ss_pred cccceeeeec
Q 014151 370 GAGALIWQLF 379 (430)
Q Consensus 370 ~~G~~~W~~~ 379 (430)
+.|.++|...
T Consensus 290 ~~G~fyWep~ 299 (332)
T 1hjs_A 290 GVGLFYWEPA 299 (332)
T ss_dssp EEEEEEECTT
T ss_pred eEEEEEEccc
Confidence 7999999854
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-17 Score=178.42 Aligned_cols=162 Identities=15% Similarity=0.217 Sum_probs=117.7
Q ss_pred CCCc--EEEeCC--------eEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcc
Q 014151 38 EMGF--VTRNGT--------HFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL 107 (430)
Q Consensus 38 ~~gf--v~~~g~--------~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~ 107 (430)
+.|| |+++++ +|++||+|++++|+|.+...... ...+.+.++++|+.||++|+|+||+|.-.. ++
T Consensus 304 ~~G~R~i~~~~~~d~~G~~f~f~lNG~~v~l~G~n~~~~~~~~-~~~~~~~~~~~l~~~k~~g~N~iR~wgg~~--y~-- 378 (848)
T 2je8_A 304 RIGLRTIRVVNEKDKDGESFYFEVNGIPMFAKGANYIPQDALL-PNVTTERYQTLFRDMKEANMNMVRIWGGGT--YE-- 378 (848)
T ss_dssp EECCCCEEEECCEETTEECCEEEETTEEECEEEEEECCSCSSG-GGCCHHHHHHHHHHHHHTTCCEEEECTTSC--CC--
T ss_pred eEEeEEEEEEecCCCCCceEEEEECCEEeEEEeEeecCchhcc-cCCCHHHHHHHHHHHHHcCCcEEEeCCCcc--CC--
Confidence 4566 555554 69999999999999965311111 125789999999999999999999974211 11
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 014151 108 QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKT 187 (430)
Q Consensus 108 ~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~ 187 (430)
+ ++++++|+++||+|+.++.. ++ ..+..++..++.+++.++.
T Consensus 379 --------~------~~~~d~cD~~GilV~~e~~~-----~~-------------------~~~~~~~~~~~~~~~~~~~ 420 (848)
T 2je8_A 379 --------N------NLFYDLADENGILVWQDFMF-----AC-------------------TPYPSDPTFLKRVEAEAVY 420 (848)
T ss_dssp --------C------HHHHHHHHHHTCEEEEECSC-----BS-------------------SCCCCCHHHHHHHHHHHHH
T ss_pred --------C------HHHHHHHHHcCCEEEECccc-----cc-------------------CCCCCCHHHHHHHHHHHHH
Confidence 1 36899999999999876531 10 0112468889999999999
Q ss_pred HHhccCCcccccccCCCceeEEeecCCCCCC-----CCC--Ch---HH-HH----HHHHHHHHHHHhcCCCCEEEEcc
Q 014151 188 VLTRKNTITGVEYRNDPTIFAWELINEPRCM-----SDP--SG---DT-LQ----DWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 188 lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~-----~~~--~~---~~-~~----~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+++| +++||+|++|++.||+... ... ++ +. .. .+.+.+.+.+|++||+|+|+.++
T Consensus 421 ~v~r--------~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~v~~~S 490 (848)
T 2je8_A 421 NIRR--------LRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSS 490 (848)
T ss_dssp HHHH--------HTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSB
T ss_pred HHHH--------hcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCeEEecC
Confidence 9999 9999999999999998531 000 01 11 11 25567999999999999998875
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-16 Score=171.25 Aligned_cols=186 Identities=13% Similarity=0.153 Sum_probs=139.2
Q ss_pred CCCCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCCh
Q 014151 37 PEMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDE 116 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de 116 (430)
.....|+.++..|++|||||++.|...|+.... .++.|+++|+.||++|+|+|++++| |..+||+||+||-
T Consensus 21 ~~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p-----~pe~W~d~l~kmKa~GlNtV~tYV~----Wn~hEP~eG~fdF 91 (1003)
T 3og2_A 21 PLQNIVTWDEHSLFVHGERVVIFSGEVHPFRLP-----VPSLYLDVFHKIKALGFNTVSFYVD----WALLEGKPGRFRA 91 (1003)
T ss_dssp CSSSSEEECSSCEEETTEEECEEEEEECGGGCC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCC
T ss_pred CCcceEEEcCCeEEECCEEEEEEEEEECCccCC-----CHHHHHHHHHHHHHcCCCEEEEecc----hhhcCCCCCEecc
Confidence 345679999999999999999999988775543 2688999999999999999999887 7789999999997
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEe----ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLS----LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~----l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~ 192 (430)
+....||++|++|+++||+||+- .+..| .+||. |.|...... .---+||.++++.++++++|+++
T Consensus 92 sg~~dL~~fl~la~e~GL~VILRpGPYi~aEw-~~GG~---P~WL~~~~~------~lRt~~p~yl~~~~~~~~~l~~~- 160 (1003)
T 3og2_A 92 DGIFSLEPFFEAATKAGIYLLARPGPYINAEV-SGGGF---PGWLQRVKG------KLRTDAPDYLHATDNYVAHIASI- 160 (1003)
T ss_dssp CGGGCSHHHHHHHHHHTCEEEEEEESCCCTTB-GGGGC---CGGGGGCCS------CTTSCCHHHHHHHHHHHHHHHHH-
T ss_pred cchhhHHHHHHHHHHcCCEEEecCCcceeeec-CCCCc---cchhccCCC------eecCCCHHHHHHHHHHHHHHHHH-
Confidence 77778999999999999999995 34445 35665 677754211 11136799999999999999998
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCCC---ChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSDP---SGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+...++.+.+.|++|++.||.....+. ......+|+++| .|+..-..+++
T Consensus 161 --~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~---~~~~Gi~VPl~ 213 (1003)
T 3og2_A 161 --IAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQ---ARNAGIIVPLI 213 (1003)
T ss_dssp --HHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHH---HHHTTCCSCBB
T ss_pred --HHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHH---HHHcCCceEEE
Confidence 222233456799999999999864321 123444555544 55555554443
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-16 Score=152.67 Aligned_cols=238 Identities=14% Similarity=0.268 Sum_probs=157.7
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
.+.+.+.+.++|.+++= ++..|..++|++|.|+ ++.+|++++.|+++||+|+....- |+. +.|.|...
T Consensus 27 ~~~~~~~~~~fn~~t~e--n~~kW~~~ep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~lv-W~~-----~~P~W~~~- 94 (302)
T 1nq6_A 27 AAYASTLDAQFGSVTPE--NEMKWDAVESSRNSFS---FSAADRIVSHAQSKGMKVRGHTLV-WHS-----QLPGWVSP- 94 (302)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE-EST-----TCCTTTTT-
T ss_pred HHHHHHHHhcCCeEEEc--CceeeccccCCCCcCC---cHHHHHHHHHHHHCCCEEEEEecc-cCC-----CCChhhhc-
Confidence 45566777899999981 1235888999999998 677999999999999999742211 421 23677631
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---ChHHH-----HHHHHH
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SGDTL-----QDWIDE 232 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~~~~-----~~w~~~ 232 (430)
+++++.++.++++++.+++| |++ .|.+|++.|||...... ....+ .+|++.
T Consensus 95 -----------~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~ 153 (302)
T 1nq6_A 95 -----------LAATDLRSAMNNHITQVMTH--------YKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEE 153 (302)
T ss_dssp -----------SCHHHHHHHHHHHHHHHHHH--------TTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHH--------cCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHH
Confidence 45688999999999999999 997 79999999999864310 00011 347889
Q ss_pred HHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC-cchhhcc--CCCCcceEEe--eecCCCCCCCcchhhh
Q 014151 233 MSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG-SDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDD 307 (430)
Q Consensus 233 ~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g-~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~ 307 (430)
+.+++|+.||+..+.+.. |+...+ +.. ..+ ..++..+ ..-.||.+++ |.+... .....
T Consensus 154 af~~Ar~~dP~a~L~~Nd---y~~~~~------~~k---~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~-~~~~~---- 216 (302)
T 1nq6_A 154 AFRTARTVDADAKLCYND---YNTDGQ------NAK---SNAVYEMVKDFKQRGVPIDCVGFQSHFNSNS-PVPSD---- 216 (302)
T ss_dssp HHHHHHHHCTTSEEEEEE---SSCSSS------SHH---HHHHHHHHHHHHHHTCCCCEEEECCEEBTTB-CCCTT----
T ss_pred HHHHHHHhCCCCEEEecc---cccccC------chH---HHHHHHHHHHHHHCCCCcceEEEEEeecCCC-CCHHH----
Confidence 999999999998877752 221110 000 000 0111111 1224899998 665321 00111
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
+.+.++...+ .|+||+|+|+|+.. +++.|.++|+.++..+.+ .+.+.|.++|.+.|. .+|-
T Consensus 217 -------~~~~l~~~a~-~g~pi~iTE~di~~-----~~~~qa~~~~~~~~~~~~----~~~v~git~Wg~~D~--~sW~ 277 (302)
T 1nq6_A 217 -------FQANLQRFAD-LGVDVQITELDIEG-----SGSAQAANYTKVVNACLA----VTRCTGITVWGVTDK--YSWR 277 (302)
T ss_dssp -------HHHHHHHHHT-TTCEEEEEEEEECC-----CHHHHHHHHHHHHHHHHT----STTEEEEEESCSCGG--GCTT
T ss_pred -------HHHHHHHHHh-cCCcEEEeeCCCCC-----chHHHHHHHHHHHHHHHh----CCCceEEEEEcCCCC--CCcC
Confidence 2222333333 89999999999874 256788888888865543 356899999999986 4563
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=154.29 Aligned_cols=240 Identities=15% Similarity=0.179 Sum_probs=157.2
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
.+.+.+.+.++|.+++= ++..|..++|++|.|+ +..+|++++.|+++||+|+.-.. .|.. +.|.|...
T Consensus 27 ~~~~~~~~~~fn~~t~e--n~~kW~~~ep~~g~~~---~~~~D~~~~~a~~~gi~v~ghtl-~W~~-----~~P~W~~~- 94 (315)
T 3cui_A 27 AQYKAIADSEFNLVVAE--NAMKWDATEPSQNSFS---FGAGDRVASYAADTGKELYGHTL-VWHS-----QLPDWAKN- 94 (315)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEE-EESS-----SCCHHHHT-
T ss_pred HHHHHHHHhcCCEEEEC--CcccHHHhCCCCCcCC---hHHHHHHHHHHHHCCCEEEEEee-ecCC-----CCCHHHhc-
Confidence 56677778899999981 1225888999999999 78899999999999999976321 1531 23678742
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-CC-ChHHH-----HHHHHHH
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS-DP-SGDTL-----QDWIDEM 233 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~-~~-~~~~~-----~~w~~~~ 233 (430)
++.++.++.++++++.+++| |++. |.+|++.|||.... .. ....+ .+|++.+
T Consensus 95 -----------~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~a 153 (315)
T 3cui_A 95 -----------LNGSAFESAMVNHVTKVADH--------FEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETA 153 (315)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHH--------cCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHH
Confidence 35678999999999999999 9984 99999999998643 10 00011 4688899
Q ss_pred HHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-chhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchhhhHHH
Q 014151 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-MWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFEDDLKF 310 (430)
Q Consensus 234 ~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~ 310 (430)
.+++|+.||+..|.+.. |+...+ +.. ... .++...+ ..-.||.++++.+...-.....
T Consensus 154 f~~Ar~~dP~a~l~~nd---y~~~~~-----~~k~~~~----~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~------- 214 (315)
T 3cui_A 154 FRAARAADPTAKLCIND---YNVEGI-----NAKSNSL----YDLVKDFKARGVPLDCVGFQSHLIVGQVPGD------- 214 (315)
T ss_dssp HHHHHHHCSSSEEEEEE---SSCSSS-----SHHHHHH----HHHHHHHHHHTCCCCEEEECCEEETTCCCTT-------
T ss_pred HHHHHhhCCCCEEEECC---ccccCc-----chHHHHH----HHHHHHHHHCCCcccEEEeeeecCCCCCHHH-------
Confidence 99999999999887753 111110 000 000 0111100 1123898888544221011111
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+++.++...+ .|+||+|+|+|+....+. .+++.|.++|+.++..+.+ .+.+.|.++|.+.|.
T Consensus 215 ----~~~~l~~~a~-~g~pv~iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~----~~~v~git~Wg~~D~ 278 (315)
T 3cui_A 215 ----FRQNLQRFAD-LGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQ----VTRCQGVTVWGITDK 278 (315)
T ss_dssp ----HHHHHHHHHT-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHT----STTEEEEEESCSBTT
T ss_pred ----HHHHHHHHHh-cCCceEEEecccccCCCCChHHHHHHHHHHHHHHHHHHh----CCCceEEEEEeCCCC
Confidence 2233333343 899999999999742211 2345678888887765543 346899999999886
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-16 Score=163.37 Aligned_cols=169 Identities=16% Similarity=0.181 Sum_probs=132.1
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHH
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~ 121 (430)
|+.++..|++||||+.+.|...|+... .++.|+++++.||++|+|+||++++ |..+||+||+||-+....
T Consensus 11 v~~d~~~f~ldGkp~~i~sG~~Hy~r~------p~~~W~d~l~kmKa~G~NtV~~yv~----W~~hEP~~G~fdF~g~~D 80 (654)
T 3thd_A 11 IDYSRDSFLKDGQPFRYISGSIHYSRV------PRFYWKDRLLKMKMAGLNAIQTYVP----WNFHEPWPGQYQFSEDHD 80 (654)
T ss_dssp EETTTTEEEETTEEECCEEEECCGGGS------CGGGHHHHHHHHHHTTCSEEEEECC----HHHHCSBTTBCCCSGGGC
T ss_pred EEEcCCEEEECCEEEEEEEEecccccC------CHHHHHHHHHHHHHcCCCEEEEEec----hhhcCCCCCccCccchHH
Confidence 444689999999999999999876443 2689999999999999999999664 778999999999777777
Q ss_pred HHHHHHHHHHcCCEEEEec----cCCcccCCCcchhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 122 LDHVIVEARKNGVRLLLSL----VNNLQAYGGKTQYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l----~~~w~~~gg~~~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
||++|+.|+++||+||+.. +..| .+||. |.|.... +..+ --+||.++++.+++++.|++|+ .
T Consensus 81 L~~fl~~a~~~GL~ViLr~GPyi~aEw-~~GG~---P~WL~~~p~i~~------Rt~~p~y~~~~~~~~~~l~~~l---~ 147 (654)
T 3thd_A 81 VEYFLRLAHELGLLVILRPGPYICAEW-EMGGL---PAWLLEKESILL------RSSDPDYLAAVDKWLGVLLPKM---K 147 (654)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCCCTTB-GGGGC---CGGGGGSTTCCS------SSCCHHHHHHHHHHHHHHHHHH---G
T ss_pred HHHHHHHHHHcCCEEEeccCCcccccc-CCCcC---ChHHhcCCCceE------ecCCHHHHHHHHHHHHHHHHHh---h
Confidence 9999999999999999964 3445 34665 6787542 1111 1257999999999999999984 3
Q ss_pred cccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHH
Q 014151 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMS 234 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~ 234 (430)
...|++++.|++|++.||...... +.....+|+++++
T Consensus 148 ~~~~~~ggpVI~~QvENEyG~y~~-~d~~Ym~~l~~~~ 184 (654)
T 3thd_A 148 PLLYQNGGPVITVQVENEYGSYFA-CDFDYLRFLQKRF 184 (654)
T ss_dssp GGBGGGTSSEEEEECSSCGGGSSC-CCHHHHHHHHHHH
T ss_pred hhhccCCCCEEEEEeccccccccc-ccHHHHHHHHHHH
Confidence 366889999999999999975432 2355666666663
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-15 Score=146.20 Aligned_cols=286 Identities=12% Similarity=0.061 Sum_probs=162.9
Q ss_pred EEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCCh---HHHHHHHHHHHHHHHc
Q 014151 56 LYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDE---RVFKALDHVIVEARKN 132 (430)
Q Consensus 56 ~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de---~~l~~lD~~l~~A~~~ 132 (430)
.++.|+++..... ...++.+..+..|+.|+++|+|+||+-++..+.- ....+=.++. ...+.+..+++.|+++
T Consensus 34 ~~i~Gis~~~~~~--~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~--~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~ 109 (343)
T 3civ_A 34 GFIRGMTFGFVGQ--HGTWGTDEARASMRALAEQPFNWVTLAFAGLMEH--PGDPAIAYGPPVTVSDDEIASMAELAHAL 109 (343)
T ss_dssp CCEEEEEESTTCB--TTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESS--TTCCCCBCSTTTBCCHHHHHHHHHHHHHT
T ss_pred cceeeEEeccccC--CCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCC--CCCCcccccCCCCCCHHHHHHHHHHHHHC
Confidence 4688998643221 1223445567999999999999999844321110 0000000111 1367889999999999
Q ss_pred CCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHH---HHHHHHHHHHHhccCCcccccccCCCceeEE
Q 014151 133 GVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIH---KYFKHYVKTVLTRKNTITGVEYRNDPTIFAW 209 (430)
Q Consensus 133 Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~---~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~w 209 (430)
||+|++..+- |...| .|... ... .+ .+-..+++.. ..+++++..++. .+++..|.+|
T Consensus 110 GL~V~l~p~i-~~~~g------~w~g~--i~~-~~-~~~~~~~~w~~~f~~y~~~i~~~a~---------~a~~~~V~~~ 169 (343)
T 3civ_A 110 GLKVCLKPTV-NCRDG------TWRGE--IRF-EK-EHGPDLESWEAWFGSYSDMMAHYAH---------VAKRTGCEMF 169 (343)
T ss_dssp TCEEEEEEEE-EETTC------CCGGG--CCC-SB-SCCTTSSBHHHHHHHHHHHHHHHHH---------HHHHTTCSEE
T ss_pred CCEEEEEEEe-eccCC------ccccc--ccc-cC-cCCcchHHHHHHHHHHHHHHHHHHH---------HccCCCceEE
Confidence 9999997763 31111 23110 000 00 0001122222 233333333221 1333458899
Q ss_pred eecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceE
Q 014151 210 ELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFA 289 (430)
Q Consensus 210 el~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~ 289 (430)
.++||+..... -....+++++.+|+++|. +||..... +... + ..+ .+.+||+
T Consensus 170 ~IGNE~~~~~~-----~~~~~~~Li~~vR~~~~g-~VTya~~~-~~~~-------~---------~~l-----w~~~DvI 221 (343)
T 3civ_A 170 CVGCEMTTAEP-----HEAMWRETIARVRTEYDG-LVTYNCNH-GREE-------H---------VRF-----WDAVDLI 221 (343)
T ss_dssp EEEESCTTTTT-----CHHHHHHHHHHHHHHCCS-EEEEEEET-TCTT-------T---------CSC-----GGGSSEE
T ss_pred EECCCCCCCCc-----hHHHHHHHHHHHHhhCCC-CEEEEecC-cccc-------c---------ccc-----cccCCEE
Confidence 99999987532 234557789999999997 88876421 1000 0 011 1579999
Q ss_pred EeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC------------CCChhHHHHHHHHHH
Q 014151 290 SVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK------------GFEPSLRDKLYKTIL 357 (430)
Q Consensus 290 s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~------------~~~~~~r~~~~~~~~ 357 (430)
++|.|++ |. .. +. +.+.+....+..+|||+++|||...... ..+++.|.++|+..+
T Consensus 222 gin~Y~~-~~---~w----~~----~~~~l~~~~~~~~KPIiitE~G~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~ 289 (343)
T 3civ_A 222 SSSAYYP-ID---RW----RD----RVPVLREVAEAHEKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMF 289 (343)
T ss_dssp EEECCCC-GG---GH----HH----HHHHHHHHHHHHTCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHH
T ss_pred EEeccCC-ch---hH----HH----HHHHHHHHHHHhCCCEEEEeeCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHH
Confidence 9999976 31 11 11 1122222222269999999999987532 146778888888777
Q ss_pred HHHHHHHhcCCCcccceeeeeccCCCccC----CCCceEEcCCCccHHHHHHHHHHHHh
Q 014151 358 DIVYKSAKRKRSGAGALIWQLFVEGMEEY----NDDFGIVPWERTSTYKLLTEQSCGLG 412 (430)
Q Consensus 358 ~~~~~~~~~~~~~~G~~~W~~~~~~~~~~----~dg~~i~~~~~~~~~~~~~~~~~~~~ 412 (430)
+.+. +.+...|.++|.|.+...+.. ..+|+... ..+..+|++.=..++
T Consensus 290 ~~~~----~~~~~~G~~vW~w~~~~~~r~~~~~~~~ft~~~---KpA~~vlr~~y~~~~ 341 (343)
T 3civ_A 290 AAMP----DEPWFKGYMLWEWPWKLYPREAASEDGSYCIYG---KPAEDVVARAFSAIA 341 (343)
T ss_dssp HHSC----CCTTEEEEEEEEECSSCCCGGGGGGCCSSCCTT---SHHHHHHHHHHHHHH
T ss_pred HHHh----cCCCccEEEEEEECCCCccccCcccCCCcCCCC---ChHHHHHHHHHHHhh
Confidence 6442 233488999999988532211 24566432 447788887655443
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-16 Score=159.40 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=136.4
Q ss_pred EEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHH
Q 014151 43 TRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKAL 122 (430)
Q Consensus 43 ~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~l 122 (430)
+++ .+|++||||+.+.|...|+... .++.|+++|+.||++|+|+||++++ |..+||.||+||.+....|
T Consensus 5 ~i~-~~f~~dG~p~~i~~G~~Hy~r~------p~~~W~d~l~kmKa~G~NtV~~yv~----W~~hEP~~G~fdF~g~~dL 73 (595)
T 4e8d_A 5 EIR-DDFYLDGKSFKILSGAIHYFRV------PPEDWYHSLYNLKALGFNTVETYVA----WNLHEPCEGEFHFEGDLDL 73 (595)
T ss_dssp EES-SSEEETTEECCCEEEEECGGGS------CGGGHHHHHHHHHHTTCCEEEEECC----HHHHCSBTTBCCCSGGGCH
T ss_pred EeC-CEEEECCEEEEEEEEEeChhhC------CHHHHHHHHHHHHHcCCCEEEEecc----HHHcCCCCCeecccchhhH
Confidence 455 8899999999999999876443 3689999999999999999999886 7788999999997777779
Q ss_pred HHHHHHHHHcCCEEEEe----ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 123 DHVIVEARKNGVRLLLS----LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 123 D~~l~~A~~~Gi~vil~----l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
|++++.|+++||+||+- .+..|. .||. |.|....... -=-+||.++++.++++++|++++ ...
T Consensus 74 ~~fl~~a~~~Gl~VilrpGPYi~aEw~-~GG~---P~WL~~~p~~------lRt~~p~y~~~~~~~~~~l~~~l---~~~ 140 (595)
T 4e8d_A 74 EKFLQIAQDLGLYAIVRPSPFICAEWE-FGGL---PAWLLTKNMR------IRSSDPAYIEAVGRYYDQLLPRL---VPR 140 (595)
T ss_dssp HHHHHHHHHTTCEEEEECCSCCCTTBG-GGGC---CGGGGGSSSC------SSSSCHHHHHHHHHHHHHHGGGT---GGG
T ss_pred HHHHHHHHHcCCEEEEecCCceecccC-CCcC---ChhhccCCce------eccCCHHHHHHHHHHHHHHHHHH---HHH
Confidence 99999999999999997 566673 5665 6787542111 11357999999999999999883 344
Q ss_pred cccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEE
Q 014151 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
.+.+.+.|++|++.||..... +.....+|+++++ |+..-+.++.+
T Consensus 141 ~~~~GgpVI~~QvENEyG~~~--~~~~Y~~~l~~~~---~~~Gi~vpl~t 185 (595)
T 4e8d_A 141 LLDNGGNILMMQVENEYGSYG--EDKAYLRAIRQLM---EECGVTCPLFT 185 (595)
T ss_dssp BGGGTSCEEEEESSSSGGGTC--CCHHHHHHHHHHH---HHTTCCSCEEE
T ss_pred hcccCCCEEEEEccccccccC--CcHHHHHHHHHHH---HHcCCcEEEEE
Confidence 455677899999999987654 3456677776664 44455555443
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-15 Score=149.24 Aligned_cols=246 Identities=19% Similarity=0.243 Sum_probs=161.2
Q ss_pred HHHHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 159 (430)
.+.+.|.+.++|.|++ ..+ .|..++|++|.|+ +..+|++++.|+++||+|+.-..- |+. +.|.|...
T Consensus 53 ~~~~~~~~~~fn~vt~en~~---kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv-W~~-----q~P~W~~~ 120 (347)
T 1xyz_A 53 PTYNSILQREFSMVVCENEM---KFDALQPRQNVFD---FSKGDQLLAFAERNGMQMRGHTLI-WHN-----QNPSWLTN 120 (347)
T ss_dssp HHHHHHHHHHCSEEEESSTT---SHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHT
T ss_pred HHHHHHHHhcCCEEEECCcc---cHHHhcCCCCcCC---hHHHHHHHHHHHHCCCEEEEEeee-ccc-----cCcHHHhc
Confidence 5667777889999998 222 4788899999999 678999999999999999753221 431 24778742
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----C--hHHH-HHHHHH
Q 014151 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----S--GDTL-QDWIDE 232 (430)
Q Consensus 160 ~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~--~~~~-~~w~~~ 232 (430)
. -++.++.++.++++++.+++| ||++ |.+|++.|||...... + ...+ .++++.
T Consensus 121 ~----------~~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~ 180 (347)
T 1xyz_A 121 G----------NWNRDSLLAVMKNHITTVMTH--------YKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDY 180 (347)
T ss_dssp S----------CCCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHH
T ss_pred C----------CCCHHHHHHHHHHHHHHHHHH--------hCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHH
Confidence 1 145678999999999999999 9985 9999999999864210 0 0111 368889
Q ss_pred HHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhH
Q 014151 233 MSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDL 308 (430)
Q Consensus 233 ~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~ 308 (430)
+.+++|+.||+..+.+.. |+...+ ++..=.. .++...+ ..-.||.+++ |+.... . .+ .+
T Consensus 181 af~~Ar~~dP~a~L~~Nd---yn~~~~-----~~k~~~~---~~~v~~l~~~G~~idgiG~Q~H~~~~~-~----~~-~~ 243 (347)
T 1xyz_A 181 AFRYAREADPDALLFYND---YNIEDL-----GPKSNAV---FNMIKSMKERGVPIDGVGFQCHFINGM-S----PE-YL 243 (347)
T ss_dssp HHHHHHHHCTTSEEEEEE---SSCSSS-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEESSC-C----HH-HH
T ss_pred HHHHHHhhCCCCEEEecc---Cccccc-----cchHHHH---HHHHHHHHHCCCCcceEEEeeecCCCC-C----ch-hH
Confidence 999999999999888753 221110 0000000 0111111 1223898888 554321 1 11 00
Q ss_pred HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCcc
Q 014151 309 KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFE---PSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEE 385 (430)
Q Consensus 309 ~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~ 385 (430)
..+++.++...+ .|+||+|+|+++.......+ ++.|.++|+.++..+.+. +.+.|.++|.+.|. .+
T Consensus 244 ----~~~~~~l~~~a~-~G~pi~iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~----~~v~git~Wg~~D~--~s 312 (347)
T 1xyz_A 244 ----ASIDQNIKRYAE-IGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLAN----PNCNTFVMWGFTDK--YT 312 (347)
T ss_dssp ----HHHHHHHHHHHH-TTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHC----TTEEEEEESCSBTT--SC
T ss_pred ----HHHHHHHHHHHh-cCCceEEEeccccCCCCCCchhHHHHHHHHHHHHHHHHHhc----CCeeEEEEecCccC--Cc
Confidence 123344444444 89999999999976432211 356788888877766553 46899999999986 45
Q ss_pred C
Q 014151 386 Y 386 (430)
Q Consensus 386 ~ 386 (430)
|
T Consensus 313 W 313 (347)
T 1xyz_A 313 W 313 (347)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7e-15 Score=152.95 Aligned_cols=262 Identities=16% Similarity=0.177 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHH-HcCCCEEEEccc-cCC-CCCcccc--CCC--CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCC
Q 014151 76 RARVGAMLQAGA-KMGLTVCRTWAF-NDG-GYNSLQI--SPG--QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148 (430)
Q Consensus 76 ~~~~~~~~~~~~-~~G~n~vR~~~~-~~g-~~~~~~~--~pg--~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~g 148 (430)
..+++++|+.++ ++|++.||++.. +++ .+-...+ ++| .|+ +..+|++++.|+++||+++++|...
T Consensus 32 r~~~~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n---~~~~D~~~~~~~~~Gi~p~v~l~~~----- 103 (503)
T 1w91_A 32 QKEYLDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYN---FTYIDRIVDSYLALNIRPFIEFGFM----- 103 (503)
T ss_dssp BHHHHHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEEC---CHHHHHHHHHHHHTTCEEEEEECSB-----
T ss_pred CHHHHHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeec---cHHHHHHHHHHHHCCCEEEEEEcCC-----
Confidence 467889999997 999999998642 221 1101111 244 455 6789999999999999999998631
Q ss_pred CcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----hccCCcccccccCCCcee--EEeecCCCCCCCC--
Q 014151 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVL----TRKNTITGVEYRNDPTIF--AWELINEPRCMSD-- 220 (430)
Q Consensus 149 g~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv----~R~n~~tg~~yk~~p~I~--~wel~NEp~~~~~-- 220 (430)
|.|......+. ..-..-+..|+..+.+.++++.++ +| |+.. .|- .|+++|||+....
T Consensus 104 -----P~~~~~~~~~~-~~w~~~~~~p~~~~~~~~~v~~~~~~~~~r--------yg~~-~V~~W~wev~NEp~~~~~~~ 168 (503)
T 1w91_A 104 -----PKALASGDQTV-FYWKGNVTPPKDYNKWRDLIVAVVSHFIER--------YGIE-EVRTWLFEVWNEPNLVNFWK 168 (503)
T ss_dssp -----CGGGBSSCCEE-TTTTEECSCBSCHHHHHHHHHHHHHHHHHH--------HCHH-HHHTSEEEECSCTTSTTTSG
T ss_pred -----cHHHhCCCCce-eecCCCCCCccCHHHHHHHHHHHHHHHHhh--------cCch-hhceeeEEEeeCCCCccCCC
Confidence 23332100000 000000233444555665555555 55 5532 265 6899999997421
Q ss_pred -CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCC
Q 014151 221 -PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDH 297 (430)
Q Consensus 221 -~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~ 297 (430)
...+.+.+++++.+.+||++||+..| |+.+..+. ...|.. .|... .....+|++++|.|+..
T Consensus 169 ~~~~~~y~~~~~~~~~~ik~~~P~~~v--ggp~~~~~---------~~~w~~----~~l~~~~~~g~~~D~is~H~Y~~~ 233 (503)
T 1w91_A 169 DANKQEYFKLYEVTARAVKSVDPHLQV--GGPAICGG---------SDEWIT----DFLHFCAERRVPVDFVSRHAYTSK 233 (503)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCTTCEE--EEEEECSS---------CTHHHH----HHHHHHHHTTCCCCEEEEEEECBC
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeE--EeeeccCC---------chHHHH----HHHHHHHhCCCCCCEEEEeecCCC
Confidence 14566788889999999999999887 32221110 013422 12211 11235999999999976
Q ss_pred CCCCcc----hh--hhHHHHHHHHHHHHHhhhh--cCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcC
Q 014151 298 WFHDLE----FE--DDLKFVTKWMLSHIEDGDK--ELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRK 367 (430)
Q Consensus 298 w~~~~~----~~--~~~~~~~~~l~~~~~~a~~--~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~ 367 (430)
+..... .. ...+.+...+....+...+ ..++||+|+|+|....... .++..++.|+...+. +..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~---~~~--- 307 (503)
T 1w91_A 234 APHKKTFEYYYQELEPPEDMLEQFKTVRALIRQSPFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILS---EGG--- 307 (503)
T ss_dssp SCSEECSSCEECCBCCHHHHHHHHHHHHHHHHTSSSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHH---HGG---
T ss_pred ccccccccccccccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHH---HHh---
Confidence 430000 00 0011122222222111221 2489999999999764211 122345555543332 221
Q ss_pred CCcccceeeeeccC
Q 014151 368 RSGAGALIWQLFVE 381 (430)
Q Consensus 368 ~~~~G~~~W~~~~~ 381 (430)
..+.+..+|++.+.
T Consensus 308 ~~v~~~~~w~~~D~ 321 (503)
T 1w91_A 308 DYVDSFSYWTFSDV 321 (503)
T ss_dssp GTCSEEEESCSBSC
T ss_pred hhhheEEEEEEecc
Confidence 12567899999874
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.59 E-value=7e-15 Score=152.83 Aligned_cols=278 Identities=15% Similarity=0.171 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHH-HcCCCEEEEccc-cCC--CCCcccc--CCC--CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 76 RARVGAMLQAGA-KMGLTVCRTWAF-NDG--GYNSLQI--SPG--QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 76 ~~~~~~~~~~~~-~~G~n~vR~~~~-~~g--~~~~~~~--~pg--~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
..+++++|+.++ ++|+|+||++.. +++ .+ ...+ ++| .|+ +..+|++++.|+++||+++++|...
T Consensus 32 ~~~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~~-~~~~~~~~g~~~~~---~~~~D~~~~~~~~~Gi~p~v~l~~~---- 103 (500)
T 1uhv_A 32 QKEYIETLKYVKENIDFKYIRGHGLLCDDVGIY-REDVVGDEVKPFYN---FTYIDRIFDSFLEIGIRPFVEIGFM---- 103 (500)
T ss_dssp BHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCE-EEEEETTEEEEEEC---CHHHHHHHHHHHHHTCEECEEECCC----
T ss_pred CHHHHHHHHHHHHhcCceEEEEecCcCCCceee-ecccccCCCceEEe---hhHHHHHHHHHHHCCCEEEEEEccC----
Confidence 468899999998 999999999652 211 00 0111 244 454 6789999999999999999998531
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHH----HHHhccCCcccccccCCCcee--EEeecCCCCCCCC-
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVK----TVLTRKNTITGVEYRNDPTIF--AWELINEPRCMSD- 220 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~----~lv~R~n~~tg~~yk~~p~I~--~wel~NEp~~~~~- 220 (430)
|.|......+. ..-..-+..|+....+.++++ .+.+| |++. .|. .|+++|||+....
T Consensus 104 ------P~~~~~~~~~~-~~~~~~~~~p~~~~~w~~~~~~~~~~~~~r--------yg~~-~V~~W~~~~~NEpn~~~~~ 167 (500)
T 1uhv_A 104 ------PKKLASGTQTV-FYWEGNVTPPKDYEKWSDLVKAVLHHFISR--------YGIE-EVLKWPFEIWNEPNLKEFW 167 (500)
T ss_dssp ------CTTTBSSCCEE-TTTTEECSCBSCHHHHHHHHHHHHHHHHHH--------HCHH-HHTTCCEEESSCTTSTTTS
T ss_pred ------hHHHhCCCCce-eecCCCCCCCcCHHHHHHHHHHHHHHHHHh--------cCcc-ceeeeeEEEeeCCCCcccC
Confidence 23332100000 000000233433444444444 45555 5542 255 4799999996321
Q ss_pred --CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCC
Q 014151 221 --PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHW 298 (430)
Q Consensus 221 --~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w 298 (430)
...+.+.+++.+.+.+||++||+..|. ..+..+. ...|... -.++.... ...+|++++|.|+...
T Consensus 168 ~~~~~~~y~~~~~~~~~~ik~~~P~~~vg--gp~~~~~---------~~~w~~~-~l~~~~~~-~~~~D~is~H~Y~~~~ 234 (500)
T 1uhv_A 168 KDADEKEYFKLYKVTAKAIKEVNENLKVG--GPAICGG---------ADYWIED-FLNFCYEE-NVPVDFVSRHAYTSKQ 234 (500)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHCTTSCEE--EEEECTT---------CTHHHHH-HHHHHHHH-TCCCSEEEEEEECBCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCEEE--CcccCCC---------chHHHHH-HHHHHHhC-CCCCcEEEEeecCCCc
Confidence 145567788899999999999997772 2221110 0123210 00111111 2359999999998654
Q ss_pred CCCc---chh--hhHHHHHHHHHHHHHhhhh--cCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 299 FHDL---EFE--DDLKFVTKWMLSHIEDGDK--ELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 299 ~~~~---~~~--~~~~~~~~~l~~~~~~a~~--~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
.... ... ...+.....+....+...+ ..++||+|+|+|....... .++..|..|+...+. +.. ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~---~~~---~~ 308 (500)
T 1uhv_A 235 GEYTPHLIYQEIMPSEYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILS---EGG---DY 308 (500)
T ss_dssp CCCCSSCCCCCBCCHHHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHH---HGG---GT
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHH---HHH---hh
Confidence 2110 000 0011122222222222221 2589999999999764221 123455666544332 221 13
Q ss_pred cccceeeeeccCCC------ccCCCCceEEcCC
Q 014151 370 GAGALIWQLFVEGM------EEYNDDFGIVPWE 396 (430)
Q Consensus 370 ~~G~~~W~~~~~~~------~~~~dg~~i~~~~ 396 (430)
+.|..+|++.|.-. ..+..+|++...+
T Consensus 309 v~~~~~W~l~D~~e~~~~~~~~~~~~fGL~~~d 341 (500)
T 1uhv_A 309 VDSFSYWTFSDVFEERDVPRSQFHGGFGLVALN 341 (500)
T ss_dssp CSEEEESCSBSCCCTTSSCCSSCSCCSCSEETT
T ss_pred hhheeeeEEechhhccCCCCccccCCcccCCCC
Confidence 56788999986311 1122478877554
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-14 Score=140.86 Aligned_cols=247 Identities=17% Similarity=0.220 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe-ccCCcccCCCcchhhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS-LVNNLQAYGGKTQYVNW 156 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~-l~~~w~~~gg~~~y~~W 156 (430)
.+..+.+.+ +.++|.|++= ++..|..++|++|.|+ |..+|++++.|+++||+|..- |. |.. +.|.|
T Consensus 26 ~~~~~~~~~-~~~fn~vt~e--N~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv--W~~-----q~P~W 92 (331)
T 1n82_A 26 TIEMQKQLL-IDHVNSITAE--NHMKFEHLQPEEGKFT---FQEADRIVDFACSHRMAVRGHTLV--WHN-----QTPDW 92 (331)
T ss_dssp HHHHTHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE--ESS-----SCCGG
T ss_pred hCHHHHHHH-HhcCCEEEEC--CcccHHHhCCCCCccC---hHHHHHHHHHHHHCCCEEEEEeee--cCC-----CCChh
Confidence 345566666 5699999981 1235888999999999 678999999999999999763 32 432 24778
Q ss_pred hhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-----C--hHHH-HH
Q 014151 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-----S--GDTL-QD 228 (430)
Q Consensus 157 ~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-----~--~~~~-~~ 228 (430)
.... ......+.+..++.++++++.+++| |++ .|.+|++.|||...... + .+.+ .+
T Consensus 93 ~~~~------~~g~~~~~~~~~~~~~~~i~~v~~r--------Y~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~ 156 (331)
T 1n82_A 93 VFQD------GQGHFVSRDVLLERMKCHISTVVRR--------YKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDD 156 (331)
T ss_dssp GGBC------SSSSBCCHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTT
T ss_pred hccC------CCCCCCCHHHHHHHHHHHHHHHHHH--------hcC--CceEEeeecccccCCCccccccchHHHhcCHH
Confidence 7521 0112345678999999999999999 998 79999999999764210 0 0111 35
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccC-cchhhcc--CCCCcceEEeeecCCCCCCCcchh
Q 014151 229 WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG-SDFIRNS--NNDNIDFASVHIYPDHWFHDLEFE 305 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g-~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~ 305 (430)
|++.+.+++|+.||+..+.++. |+.. .|.. ..+ ...+..+ ..-.||.++++.+...-.+ .
T Consensus 157 ~i~~af~~Ar~~dP~a~L~~Nd---yn~~-------~~~k---~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~--~-- 219 (331)
T 1n82_A 157 FMEQAFLYAYEADPDALLFYND---YNEC-------FPEK---REKIFALVKSLRDKGIPIHGIGMQAHWSLTRP--S-- 219 (331)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEE---SSTT-------SHHH---HHHHHHHHHHHHHTTCCCCEEEECCEEESSSS--C--
T ss_pred HHHHHHHHHHHHCCCCEEEEec---ccCC-------Cchh---HHHHHHHHHHHHHCCCccceEEeceecCCCCC--C--
Confidence 8889999999999999888753 2211 1110 000 0111111 1123788887432110001 1
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-----CC------ChhHHHHHHHHHHHHHHHHHhcCCC-cccc
Q 014151 306 DDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-----GF------EPSLRDKLYKTILDIVYKSAKRKRS-GAGA 373 (430)
Q Consensus 306 ~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-----~~------~~~~r~~~~~~~~~~~~~~~~~~~~-~~G~ 373 (430)
.+ .+++.++...+ .|+||.|+|+++..... .. +++.+.++|+.++..+.+. +. +.|.
T Consensus 220 --~~----~~~~~l~~~a~-~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~----~~~v~gi 288 (331)
T 1n82_A 220 --LD----EIRAAIERYAS-LGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEY----RDVIQSV 288 (331)
T ss_dssp --HH----HHHHHHHHHHT-TTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT----TTTEEEE
T ss_pred --HH----HHHHHHHHHHh-cCCeEEEEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhC----cCcccEE
Confidence 11 13333444443 89999999999986521 01 1456788888888766553 34 5669
Q ss_pred eeeeeccC
Q 014151 374 LIWQLFVE 381 (430)
Q Consensus 374 ~~W~~~~~ 381 (430)
++|.+.|.
T Consensus 289 t~Wg~~D~ 296 (331)
T 1n82_A 289 TFWGIADD 296 (331)
T ss_dssp EESCSBTT
T ss_pred EEECCCCC
Confidence 99999986
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-14 Score=139.74 Aligned_cols=230 Identities=17% Similarity=0.239 Sum_probs=148.6
Q ss_pred HHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhC
Q 014151 83 LQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEG 161 (430)
Q Consensus 83 ~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G 161 (430)
.+.+ +.++|.|+. .. ..|..++|++|.|+ |..+|++++.|+++||+|..-... |+. +.|.|....
T Consensus 33 ~~~~-~~~fn~vt~en~---~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtl~-W~~-----q~P~W~~~~- 98 (303)
T 1i1w_A 33 AAII-QANFGQVTPENS---MKWDATEPSQGNFN---FAGADYLVNWAQQNGKLIRGHTLV-WHS-----QLPSWVSSI- 98 (303)
T ss_dssp HHHH-HHHCSEEEESST---TSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE-CST-----TCCHHHHTC-
T ss_pred HHHH-HhhCCEEEECcc---ccHHHhCCCCCccC---hhhHHHHHHHHHHCCCEEEEeecc-ccC-----CCChHHhcC-
Confidence 3344 669999997 22 24788999999998 678999999999999999753221 532 347887421
Q ss_pred CCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-ChHHH-----HHHHHHHH
Q 014151 162 IGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-SGDTL-----QDWIDEMS 234 (430)
Q Consensus 162 ~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-~~~~~-----~~w~~~~~ 234 (430)
.+ +.+++.++++++.+++| |++. |.+|++.|||...... ....+ .+|++.+.
T Consensus 99 -----------~~~~~~~~~~~~~i~~v~~r--------y~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af 157 (303)
T 1i1w_A 99 -----------TDKNTLTNVMKNHITTLMTR--------YKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAF 157 (303)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHh--------cCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHH
Confidence 14 45799999999999999 9985 9999999999643210 00111 35788999
Q ss_pred HHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhHHH
Q 014151 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDLKF 310 (430)
Q Consensus 235 ~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~ 310 (430)
+++|+.||+..+.++. |+...+.. +..-.. ...+..+ ..-.||.+++ |+.... .
T Consensus 158 ~~Ar~~dP~a~L~~Nd---yn~~~~~~----~k~~~~---~~~v~~l~~~G~~iDgiG~Q~H~~~~~------~------ 215 (303)
T 1i1w_A 158 QTARAADPNAKLYIND---YNLDSASY----PKTQAI---VNRVKKWRAAGVPIDGIGSQTHLSAGQ------G------ 215 (303)
T ss_dssp HHHHHHCTTSEEEEEE---SSCCCSSS----HHHHHH---HHHHHHHHHTTCCCCEEEECCEECTTT------H------
T ss_pred HHHHHHCCCCeEEecc---ccccCCCh----HHHHHH---HHHHHHHHHCCCcccEEEeccccCCCC------H------
Confidence 9999999999988763 22111100 000000 0111111 1123888888 543321 0
Q ss_pred HHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccC
Q 014151 311 VTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~ 386 (430)
..+.+.++...+ .|+ ||+|+|+++... +.+.|+.++..+.+ .+.+.|.++|.+.+. .+|
T Consensus 216 --~~~~~~l~~~a~-~G~~pi~iTEldi~~~--------qa~~y~~~~~~~~~----~~~v~git~Wg~~D~--~sW 275 (303)
T 1i1w_A 216 --ASVLQALPLLAS-AGTPEVAITELDVAGA--------SSTDYVNVVNACLN----VSSCVGITVWGVADP--DSW 275 (303)
T ss_dssp --HHHHHHHHHHHT-TCCSEEEEEEEEETTC--------CHHHHHHHHHHHHH----CTTEEEEEESCSBGG--GST
T ss_pred --HHHHHHHHHHHH-CCCCeEEEEeCCccch--------HHHHHHHHHHHHHh----CCCceEEEEEcCCCC--CCc
Confidence 113333444443 898 999999998732 34556767665544 346899999999986 455
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.1e-14 Score=137.58 Aligned_cols=235 Identities=14% Similarity=0.221 Sum_probs=149.6
Q ss_pred HHHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 82 MLQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 82 ~~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
+.+.+ +.++|.|+. .. ..|..++|++|+|+ |..+|++++.|+++||+|.....- |+. +.|.|....
T Consensus 31 ~~~~~-~~~fn~vt~en~---~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv-W~~-----q~P~W~~~~ 97 (303)
T 1ta3_B 31 NEAIV-ASQFGVITPENS---MKWDALEPSQGNFG---WSGADYLVDYATQHNKKVRGHTLV-WHS-----QLPSWVSSI 97 (303)
T ss_dssp HHHHH-HHHCSEEEESST---TSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTC
T ss_pred HHHHH-HhhCCEEEECcc---ccHHHhCCCCCccC---chHHHHHHHHHHHCCCEEEEeecc-ccC-----CCChhhhcC
Confidence 34444 679999997 22 24778899999998 778999999999999999763221 532 347887421
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHHHHHHH
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDWIDEMS 234 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w~~~~~ 234 (430)
.+.+..++.++++++.+++| |++. |.+|++.|||...... + ...+ .++++...
T Consensus 98 -----------~~~~~~~~~~~~~i~~v~~r--------Y~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af 156 (303)
T 1ta3_B 98 -----------GDANTLRSVMTNHINEVVGR--------YKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAF 156 (303)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHH--------TTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHh--------cCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHH
Confidence 12246799999999999999 9984 9999999999643210 1 0111 36888999
Q ss_pred HHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhHHH
Q 014151 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDLKF 310 (430)
Q Consensus 235 ~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~ 310 (430)
+++|+.||+..+.++. |+...+.. +..-.. ..++..+ ..-.||.+++ |+.... .+ .+ .
T Consensus 157 ~~Ar~~dP~a~L~~Nd---yn~~~~~~----~k~~~~---~~~v~~l~~~G~~iDgiG~Q~H~~~~~-~~---~~-~--- 218 (303)
T 1ta3_B 157 ETARAADPDAKLYIND---YNLDSASY----AKTQAM---ASYVKKWLAEGVPIDGIGSQAHYSSSH-WS---ST-E--- 218 (303)
T ss_dssp HHHHHHCTTSEEEEEE---SCCCCTTS----HHHHHH---HHHHHHHHHTTCCCCEEEECCEECTTC-CC---GG-G---
T ss_pred HHHHHHCCCCEEEecc---ccccCCch----HHHHHH---HHHHHHHHHCCCCcceEEEeeecCCCC-CC---HH-H---
Confidence 9999999999988863 22111100 000000 0111111 1223888887 654432 11 01 1
Q ss_pred HHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 311 VTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
+++.++...+ .|+ ||+|+|+++... +.+.|+.++..+.+ .+.+.|.++|.+.+. .+|-
T Consensus 219 ----~~~~l~~~a~-~G~~pi~iTEldi~~~--------qa~~y~~~~~~~~~----~~~v~git~Wg~~D~--~sW~ 277 (303)
T 1ta3_B 219 ----AAGALSSLAN-TGVSEVAITELDIAGA--------ASSDYLNLLNACLN----EQKCVGITVWGVSDK--DSWR 277 (303)
T ss_dssp ----HHHHHHHHHT-TCCSEEEEEEEEETTC--------CHHHHHHHHHHHHT----CTTEEEEEESCSBGG--GSTT
T ss_pred ----HHHHHHHHHH-CCCCeEEEeeCCcChh--------HHHHHHHHHHHHHh----CCCceEEEEecCCcC--CCcc
Confidence 2233333343 899 999999998732 24556666655443 346899999999986 4563
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.3e-14 Score=158.26 Aligned_cols=158 Identities=15% Similarity=0.125 Sum_probs=113.9
Q ss_pred CCCc--EEE-----eCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC
Q 014151 38 EMGF--VTR-----NGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS 110 (430)
Q Consensus 38 ~~gf--v~~-----~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~ 110 (430)
+.|| |++ .+.+|.+||+|++++|+|.+ +... ...+.+.++++|+.||++|+|+||+.. ++ .
T Consensus 331 ~~GfR~i~~~~~~~~~~~f~lNG~pi~l~G~n~~--pd~~-~~~~~e~~~~dl~~~k~~g~N~iR~~h-----~~----~ 398 (1032)
T 2vzs_A 331 KFGVRDVKATLNSSGGRQYSVNGKPLLIRGGGYT--PDLF-LRWNETAAADKLKYVLNLGLNTVRLEG-----HI----E 398 (1032)
T ss_dssp EECCCCEEEEECTTSCEEEEETTEEECEEEEECC--CCTT-CCCCHHHHHHHHHHHHHTTCCEEEEES-----CC----C
T ss_pred eeeeEEEEEEEccCCCceEEECCEEEEEeccccC--cccc-ccCCHHHHHHHHHHHHHcCCCEEECCC-----CC----C
Confidence 4566 444 35789999999999999963 2222 135789999999999999999999922 21 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCEEEEeccC--CcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 014151 111 PGQFDERVFKALDHVIVEARKNGVRLLLSLVN--NLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTV 188 (430)
Q Consensus 111 pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~--~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~l 188 (430)
+ ++++++|+++||+|+-++.. .|. .|. +.. .....| .|+..+.+.+.++.+
T Consensus 399 ----~-------~~fydlcDelGilVw~e~~~~~~w~---------~~~---~~~--~~~~~~--~~~~~~~~~~~~~~~ 451 (1032)
T 2vzs_A 399 ----P-------DEFFDIADDLGVLTMPGWECCDKWE---------GQV---NGE--EKGEPW--VESDYPIAKASMFSE 451 (1032)
T ss_dssp ----C-------HHHHHHHHHHTCEEEEECCSSSGGG---------TTT---STT--SSSCCC--CTTHHHHHHHHHHHH
T ss_pred ----c-------HHHHHHHHHCCCEEEEccccccccc---------ccC---CCC--Cccccc--ChhHHHHHHHHHHHH
Confidence 1 46799999999999887632 231 110 000 001112 234566788889999
Q ss_pred HhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 189 LTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 189 v~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
++| +++||+|++|.+.||+... ..+.+++.+.+|++||.|+|+.++
T Consensus 452 V~R--------~rNHPSIi~Ws~gNE~~~~--------~~~~~~~~~~~k~~DptRpv~~~s 497 (1032)
T 2vzs_A 452 AER--------LRDHPSVISFHIGSDFAPD--------RRIEQGYLDAMKAADFLLPVIPAA 497 (1032)
T ss_dssp HHH--------HTTCTTBCCEESCSSSCCC--------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred HHH--------hcCCCeEEEEEeccCCCch--------HHHHHHHHHHHHHhCCCCeEEecC
Confidence 999 9999999999999998642 234567788899999999998765
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.6e-13 Score=135.51 Aligned_cols=170 Identities=20% Similarity=0.282 Sum_probs=125.4
Q ss_pred CCCCcEEEe-C-CeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCC-CCCcc--ccC
Q 014151 37 PEMGFVTRN-G-THFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDG-GYNSL--QIS 110 (430)
Q Consensus 37 ~~~gfv~~~-g-~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g-~~~~~--~~~ 110 (430)
...|.|+|+ + ..|+. ||+||++.|...|.+.... +.++++..|+..++.|+|+||+-++... .++.. .|-
T Consensus 13 ~~hg~l~Vs~~~r~f~~~dG~PFf~lgDT~W~l~~~l----~~~e~~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf 88 (463)
T 3kzs_A 13 WSNGKLVVSEEGRYLKHENGTPFFWLGETGWLLPERL----NRDEAEYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSM 88 (463)
T ss_dssp GGGCCEEECTTSSCEEETTSCBCCEEEEECTTHHHHC----CHHHHHHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSC
T ss_pred ccCCCeEEcCCCceEecCCCCeEEechhHHHHHhcCC----CHHHHHHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCc
Confidence 356889997 4 45777 9999999999975544443 5789999999999999999999776311 11111 111
Q ss_pred -CC----CCCh----HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHH
Q 014151 111 -PG----QFDE----RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYF 181 (430)
Q Consensus 111 -pg----~~de----~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~ 181 (430)
.| .+++ +.|+++|++|+.|.++||++-|.+. |..+ +. .+ .+. .+..
T Consensus 89 ~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~--Wg~~------v~----~~---------~m~----~e~~ 143 (463)
T 3kzs_A 89 TDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCI--WGSP------VS----HG---------EMN----VDQA 143 (463)
T ss_dssp SSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESS--CHHH------HH----TT---------SCC----HHHH
T ss_pred CCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEE--eCCc------cc----cC---------CCC----HHHH
Confidence 12 4555 8999999999999999999987654 6311 11 01 122 3446
Q ss_pred HHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 182 ~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+.|++.|++| |++.|+|+ |.|+||-.... . .+..++|+..||+.||+||+|+-.
T Consensus 144 ~~Y~ryl~~R--------y~~~~Nii-W~lgGD~~~~~-----~-~~~w~~~~~~i~~~dp~~L~T~H~ 197 (463)
T 3kzs_A 144 KAYGKFLAER--------YKDEPNII-WFIGGDIRGDV-----K-TAEWEALATSIKAIDKNHLMTFHP 197 (463)
T ss_dssp HHHHHHHHHH--------HTTCSSEE-EEEESSSCTTS-----S-HHHHHHHHHHHHHHCCSSCEEEEC
T ss_pred HHHHHHHHHH--------hccCCCCE-EEeCCCCCCcc-----C-HHHHHHHHHHHHhcCCCCcEEEeC
Confidence 8899999999 99999998 99999987642 1 234588899999999999999853
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6.6e-14 Score=136.68 Aligned_cols=236 Identities=15% Similarity=0.238 Sum_probs=152.6
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
.+.+.+.+.++|.|+.= ++..|..++|++|+|+ |..+|++++.|+++||+|..-.. -|+. +.|.|...
T Consensus 28 ~~~~~~~~~~fn~vt~e--N~~kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtl-vW~~-----q~P~W~~~- 95 (313)
T 1v0l_A 28 STYTSIAGREFNMVTAE--NEMKIDATEPQRGQFN---FSSADRVYNWAVQNGKQVRGHTL-AWHS-----QQPGWMQS- 95 (313)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCHHHHT-
T ss_pred HHHHHHHHhcCCEEEEC--CcccHHHhCCCCCccC---chHHHHHHHHHHHCCCEEEEEee-cCcC-----cCchhhhc-
Confidence 45666777899999981 1234778899999998 67899999999999999865322 1532 24778742
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---ChHHH----HHHHHHH
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SGDTL----QDWIDEM 233 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~~~~----~~w~~~~ 233 (430)
.+.+..++.++++++.+++| ||+. |..|++.|||...... ...-+ .+|+...
T Consensus 96 -----------~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~a 154 (313)
T 1v0l_A 96 -----------LSGSALRQAMIDHINGVMAH--------YKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVA 154 (313)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHH--------cCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHH
Confidence 24567899999999999999 9974 9999999999754211 00111 4578899
Q ss_pred HHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhHH
Q 014151 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDLK 309 (430)
Q Consensus 234 ~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~ 309 (430)
.+++|+.||+..+.+.. |+...+ ++..-... ..+++.+ ..-.||-+++ |+.... .....
T Consensus 155 f~~Ar~~dP~a~L~~Nd---yn~~~~-----~~~k~~~~--~~~v~~l~~~G~~iDgIG~Q~H~~~~~-~~~~~------ 217 (313)
T 1v0l_A 155 FRTARAADPSAKLCYND---YNVENW-----TWAKTQAM--YNMVRDFKQRGVPIDCVGFQSHFNSGS-PYNSN------ 217 (313)
T ss_dssp HHHHHHHCTTSEEEEEE---SSCCST-----TSHHHHHH--HHHHHHHHHHTCCCCEEEECCEEBTTB-CCCTT------
T ss_pred HHHHHhhCCCCEEEEec---cccccC-----ChHHHHHH--HHHHHHHHHCCCCcceEEEeEEccCCC-CCHHH------
Confidence 99999999999888753 221110 00000000 0111111 1123788887 654321 11111
Q ss_pred HHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccC
Q 014151 310 FVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 310 ~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~ 386 (430)
+++.++...+ +|+||+|+|+++.. .+.++|+.++..+.+ .+.+.|.++|.+.+. .+|
T Consensus 218 -----~~~~l~~~a~-~G~pv~iTEldi~~--------~qa~~y~~~~~~~~~----~~~v~git~Wg~~D~--~sW 274 (313)
T 1v0l_A 218 -----FRTTLQNFAA-LGVDVAITELDIQG--------APASTYANVTNDCLA----VSRCLGITVWGVRDS--DSW 274 (313)
T ss_dssp -----HHHHHHHHHT-TTCEEEEEEEEETT--------CCHHHHHHHHHHHHT----CTTEEEEEESCSBGG--GST
T ss_pred -----HHHHHHHHHh-cCCeEEEEeCCccH--------HHHHHHHHHHHHHHh----cCCceEEEEECCCCC--CCc
Confidence 2223333333 89999999999872 235667777765543 346899999999885 455
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-14 Score=139.74 Aligned_cols=247 Identities=19% Similarity=0.257 Sum_probs=155.7
Q ss_pred HHHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe-ccCCcccCCCcchhhhhhhh
Q 014151 82 MLQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS-LVNNLQAYGGKTQYVNWAWE 159 (430)
Q Consensus 82 ~~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~-l~~~w~~~gg~~~y~~W~~~ 159 (430)
+.+.+ +.++|.|++ ..+ .|..++|++|+|+ |..+|++++.|+++||+|..- |. |.. +.|.|...
T Consensus 31 ~~~l~-~~~fn~vt~en~~---kW~~~ep~~g~~~---f~~~D~~v~~a~~~gi~v~ghtlv--W~~-----q~P~W~~~ 96 (356)
T 2dep_A 31 IAELY-KKHVNMLVAENAM---KPASLQPTEGNFQ---WADADRIVQFAKENGMELRFHTLV--WHN-----QTPDWFFL 96 (356)
T ss_dssp HHHHH-HHHCSEEEESSTT---SHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE--ESS-----SCCGGGGB
T ss_pred HHHHH-HhhCCEEEECCcc---cHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeecc--ccc-----cCchhhhc
Confidence 44555 579999997 222 4788999999999 788999999999999999763 32 531 34678753
Q ss_pred h--CCCCCCCC-CC--CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC--C---C--hHHH-
Q 014151 160 E--GIGISSSN-DS--FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD--P---S--GDTL- 226 (430)
Q Consensus 160 ~--G~~~~~~~-~~--f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~--~---~--~~~~- 226 (430)
. |.+..... .. .++.+..++.++++++.+++| |++ .|.+|++.|||..... . + ...+
T Consensus 97 ~~~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~r--------Y~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G 166 (356)
T 2dep_A 97 DKEGKPMVEETDPQKREENRKLLLQRLENYIRAVVLR--------YKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITG 166 (356)
T ss_dssp CTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHT
T ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHHHHHHHH--------hCC--ceeEEEeecccccCCCCCCccCChHHHhcc
Confidence 1 21110000 00 234567899999999999999 998 7999999999976431 0 0 0111
Q ss_pred HHHHHHHHHHHHh-cCCCCEEEEccCCccCCCCCCCcccCccchhhccC-cchhhcc--CCCCcceEEe--eecCCCCCC
Q 014151 227 QDWIDEMSAFVKS-IDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG-SDFIRNS--NNDNIDFASV--HIYPDHWFH 300 (430)
Q Consensus 227 ~~w~~~~~~~Ir~-~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g-~df~~~~--~~~~iD~~s~--H~Y~~~w~~ 300 (430)
.+|+..+.+++|+ .||+..+.++. |+... +.. ... ..+++.+ ..-.||.+++ |+.... +
T Consensus 167 ~~~i~~af~~Ar~~~dP~a~L~~Nd---yn~~~-------~~k---~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~--p 231 (356)
T 2dep_A 167 TEYIEVAFRATREAGGSDIKLYIND---YNTDD-------PVK---RDILYELVKNLLEKGVPIDGVGHQTHIDIYN--P 231 (356)
T ss_dssp THHHHHHHHHHHHHHCSSSEEEEEE---SCTTS-------HHH---HHHHHHHHHHHHHTTCCCCEEEECCEEESSC--S
T ss_pred HHHHHHHHHHHHHhcCCCcEEEecc---ccccC-------cch---HHHHHHHHHHHHHCCCCccEEEeeeeecCCC--C
Confidence 3688899999999 99999988863 22111 110 000 0111111 1223898888 654321 1
Q ss_pred CcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC--------CCC---hhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 301 DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK--------GFE---PSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 301 ~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~--------~~~---~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
+. + .+++.++...+ +|+||.|+|+++..... ..+ ++.+.++|+.++..+.+. .+.
T Consensus 232 --~~----~----~~~~~l~~~a~-~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~---~~~ 297 (356)
T 2dep_A 232 --PV----E----RIIESIKKFAG-LGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKEN---KDI 297 (356)
T ss_dssp --CH----H----HHHHHHHHHHT-TTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTT---GGG
T ss_pred --CH----H----HHHHHHHHHHh-CCCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhh---cCC
Confidence 11 1 13333444443 89999999999876421 011 345677777777665431 234
Q ss_pred cccceeeeeccC
Q 014151 370 GAGALIWQLFVE 381 (430)
Q Consensus 370 ~~G~~~W~~~~~ 381 (430)
+.|.++|.+.+.
T Consensus 298 v~gvt~Wg~~D~ 309 (356)
T 2dep_A 298 VSAVVFWGISDK 309 (356)
T ss_dssp EEEEEESCSBTT
T ss_pred eeEEEEecCccC
Confidence 789999999986
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=99.52 E-value=7.1e-14 Score=144.15 Aligned_cols=248 Identities=13% Similarity=0.121 Sum_probs=159.1
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
++.+.+ +.++|.+++= ++..|..++|++|+|+ |..+|++++.|+++||+|..-... |.. ..+.|.|....
T Consensus 196 ~~~~l~-~~~FN~vT~e--NemKW~~iEP~~G~~~---f~~~D~ivd~a~~nGi~VrgHtLv-Whs---~~q~P~Wv~~~ 265 (530)
T 1us2_A 196 REQAVV-KKHFNHLTAG--NIMKMSYMQPTEGNFN---FTNADAFVDWATENNMTVHGHALV-WHS---DYQVPNFMKNW 265 (530)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CCC---GGGSCHHHHTC
T ss_pred HHHHHH-HhhCCeEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeccc-ccc---cccCchHHhcC
Confidence 455556 5699999981 1224778899999998 788999999999999999763211 632 12457887531
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC--C-C--hHHH-----H--H
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD--P-S--GDTL-----Q--D 228 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~--~-~--~~~~-----~--~ 228 (430)
. -+.+..++.++++++.+++| |++|+.|..|++.|||..... . . ...+ . +
T Consensus 266 ~----------Gs~~~l~~~~~~~I~~vv~r--------Yk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d 327 (530)
T 1us2_A 266 A----------GSAEDFLAALDTHITTIVDH--------YEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSV 327 (530)
T ss_dssp C----------SCHHHHHHHHHHHHHHHHHH--------HHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSH
T ss_pred C----------CCHHHHHHHHHHHHHHHHHH--------hCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHH
Confidence 0 03467899999999999999 999999999999999875321 0 0 1111 1 7
Q ss_pred HHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcch
Q 014151 229 WIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEF 304 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~ 304 (430)
|++.+.+++|+.||+..+.+.. |+... +|..-... ..+++.+ ..-.||.+++ |+.... + +.
T Consensus 328 ~i~~AF~~Ar~aDP~AkL~~ND---Yn~~~------~~~k~~~~--~~lVk~l~~~GvpIDGIG~Q~H~~~~~--p--~~ 392 (530)
T 1us2_A 328 YIERAFQTARAADPAVILYYND---YNIEQ------NNAKTTKM--VDMVKDFQARSIPIDGVGFQMHVCMNY--P--SI 392 (530)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEE---SSTTS------CSHHHHHH--HHHHHHHHHTTCCCCEEEECCEEESSC--S--CH
T ss_pred HHHHHHHHHHHHCCCCEEEecc---ccccc------ccchhHHH--HHHHHHHHHCCCceeEEEEeeecCCCC--C--CH
Confidence 8899999999999998888753 22111 01100000 0111111 1223898888 543321 1 11
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-----------CCC---hhHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 305 EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-----------GFE---PSLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 305 ~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-----------~~~---~~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
+ .+++.++...+ +|+||.|+|+++..... ..+ ++.|.++|+.++..+++. +..+.+
T Consensus 393 ----~----~i~~~L~~~a~-lGlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~-~~~~~v 462 (530)
T 1us2_A 393 ----A----NISAAMKKVVD-LGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDT-VPVNQR 462 (530)
T ss_dssp ----H----HHHHHHHHHHT-TTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHH-SCGGGE
T ss_pred ----H----HHHHHHHHHHh-cCCeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhh-ccCCce
Confidence 1 13334444443 89999999999876430 011 456778888877766421 112358
Q ss_pred ccceeeeeccC
Q 014151 371 AGALIWQLFVE 381 (430)
Q Consensus 371 ~G~~~W~~~~~ 381 (430)
.|.++|.+.+.
T Consensus 463 ~GIT~WG~~D~ 473 (530)
T 1us2_A 463 GGISVWGTTDA 473 (530)
T ss_dssp EEEEESCSBGG
T ss_pred EEEEEEcCcCC
Confidence 89999999986
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.9e-13 Score=139.65 Aligned_cols=238 Identities=14% Similarity=0.188 Sum_probs=153.3
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
.+.+.+.+.++|.|++= .+..|..++|++|+|+ |..+|++++.|+++||+|..-.. .|+. +.|.|...
T Consensus 28 ~~~~~~~~~~fn~~t~e--n~~kw~~~ep~~g~~~---f~~~D~~~~~a~~~gi~v~ghtl-vW~~-----q~P~W~~~- 95 (436)
T 2d1z_A 28 SAYTTIASREFNMVTAE--NEMKIDATEPQRGQFN---FSAGDRVYNWAVQNGKQVRGHTL-AWHS-----QQPGWMQS- 95 (436)
T ss_dssp HHHHHHHHHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECST-----TCCHHHHT-
T ss_pred HHHHHHHHHhCCeeeec--cccccccccCCCCccC---hHHHHHHHHHHHHCCCEEEEEEE-EeCC-----CCchhhhc-
Confidence 45666777899999981 1225788899999999 77899999999999999865221 2531 34788742
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC------ChHHH-HHHHHHH
Q 014151 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP------SGDTL-QDWIDEM 233 (430)
Q Consensus 161 G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~------~~~~~-~~w~~~~ 233 (430)
++.+..++.++++++.+++| ||+ .|..|++.|||...... .-..+ .+|++..
T Consensus 96 -----------~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~a 154 (436)
T 2d1z_A 96 -----------LSGSTLRQAMIDHINGVMGH--------YKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVA 154 (436)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHHHh--------cCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHH
Confidence 24578899999999999999 986 79999999998753210 01112 4688999
Q ss_pred HHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCC-CCCCcchhhhHHH
Q 014151 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDH-WFHDLEFEDDLKF 310 (430)
Q Consensus 234 ~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~-w~~~~~~~~~~~~ 310 (430)
.+++|+.||+..+.+.. |+...+ ++..-... ..++..+ ..-.||.++++.|... +.....
T Consensus 155 f~~Ar~~dP~a~l~~Nd---yn~~~~-----~~~k~~~~--~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~------- 217 (436)
T 2d1z_A 155 FRTARAADPAAKLCYND---YNIENW-----TWAKTQGV--YNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSN------- 217 (436)
T ss_dssp HHHHHHHCTTSEEEEEE---SSCCST-----TSHHHHHH--HHHHHHHHHHTCCCCEEEECCEEBTTBCCCTT-------
T ss_pred HHHHHhhCCCCEEEEec---cccccC-----ChhHHHHH--HHHHHHHHhCCCcccEEEEeeEEcCCCCCHHH-------
Confidence 99999999998888753 221110 00000000 0111111 1123899888554321 111111
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
+++.++...+ +|+||+|+|+++.. .+.++|+.++..+.+ .+.+.|.++|.+.+. .+|-
T Consensus 218 ----~~~~l~~~a~-~g~~v~iTEldv~~--------~qa~~y~~~~~~~~~----~~~~~gvt~Wg~~d~--~sW~ 275 (436)
T 2d1z_A 218 ----FRTTLQNFAA-LGVDVAITELDIQG--------ASSSTYAAVTNDCLA----VSRCLGITVWGVRDT--DSWR 275 (436)
T ss_dssp ----HHHHHHHHHT-TTCEEEEEEEEETT--------CCHHHHHHHHHHHHT----CTTEEEEEESCSBGG--GCTT
T ss_pred ----HHHHHHHHHH-cCCeEEEeecchhH--------HHHHHHHHHHHHHHh----cCCceEEEeccccCC--cccc
Confidence 2222333333 89999999999862 235667777665543 346899999999875 4553
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-13 Score=139.58 Aligned_cols=276 Identities=16% Similarity=0.187 Sum_probs=153.9
Q ss_pred HHHHHHHHHH-HHcCCCEEEEcc-ccCC-CCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 77 ARVGAMLQAG-AKMGLTVCRTWA-FNDG-GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 77 ~~~~~~~~~~-~~~G~n~vR~~~-~~~g-~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
+.+++.|+.+ +++|++.||+|. |+++ .+...++...+|| |..+|++++.|.++||++++.|...
T Consensus 41 ~d~~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y~---~~~~D~~~d~~~~~G~~p~~~l~~~---------- 107 (500)
T 4ekj_A 41 EDSQAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVYD---WTKIDQLYDALLAKGIKPFIELGFT---------- 107 (500)
T ss_dssp HHHHHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEEC---CHHHHHHHHHHHHTTCEEEEEECCB----------
T ss_pred hHHHHHHHHHHHhcCceEEEECCccccccceeecCCCCeecc---hHHHHHHHHHHHHCCCEEEEEEeCC----------
Confidence 4555555554 678999999964 4332 2222222233577 7889999999999999999987421
Q ss_pred hhhhhhhCCCCC-CCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCC-CceeEEeecCCCCCCCC---CChHHHH
Q 014151 154 VNWAWEEGIGIS-SSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRND-PTIFAWELINEPRCMSD---PSGDTLQ 227 (430)
Q Consensus 154 ~~W~~~~G~~~~-~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I~~wel~NEp~~~~~---~~~~~~~ 227 (430)
|.|....+.+.. .....-..+ ....+.+.++++++++| |+.+ -.+..||++|||+.... .+.+.+.
T Consensus 108 P~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~R--------Yg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~ 179 (500)
T 4ekj_A 108 PEAMKTSDQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRAR--------YGVEEVRTWFFEVWNEPNLDGFWEKADQAAYF 179 (500)
T ss_dssp CGGGCSSCCEETTTTEECSCCCHHHHHHHHHHHHHHHHHH--------HCHHHHHTSEEEESSCTTSTTTSGGGCHHHHH
T ss_pred chhhcCCCCccccccCCCCcccHHHHHHHHHHHHHHHHHh--------hCccccceeEEEEEECCCCccCCCCCCHHHHH
Confidence 223221110000 000000112 23455667788888888 8753 35667999999986432 2467788
Q ss_pred HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCC---CC---
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF---HD--- 301 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~---~~--- 301 (430)
++++..+++||++||+..|..+ |..+ ..|.... .++... ....+|++++|.|+.... ..
T Consensus 180 ~l~~~~~~aik~~~P~~~Vgg~--~~~~-----------~~~~~~f-l~~~~~-~~~~~D~is~H~Y~~~~~~~~~~~~~ 244 (500)
T 4ekj_A 180 ELYDVTARAIKAIDPSLRVGGP--ATAG-----------AAWVPEF-LAHVKK-SGSAVDFVTTHTYGVDGGFLDEKGVQ 244 (500)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEE--EEGG-----------GCSHHHH-HHHHHH-TTCCCSEEEEEEESEEEEEECTTSCE
T ss_pred HHHHHHHHHHHhhCCccccccC--ccCC-----------ccccHHH-HHHHHh-cCCccceEEeeccCCCCCCccccccc
Confidence 8999999999999999887432 2111 0111100 011111 234689999999963210 00
Q ss_pred -----cchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhcCCCcccce
Q 014151 302 -----LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK--GFEPSLRDKLYKTILDIVYKSAKRKRSGAGAL 374 (430)
Q Consensus 302 -----~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~ 374 (430)
...+..... .+.+++.++... ..++||+++|||...... ..+...++.|+...+. +. .....+..
T Consensus 245 ~~~~~~~~~~~~~~-~~~~r~~l~~~~-~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~---~~---~~~~~~~~ 316 (500)
T 4ekj_A 245 DTKLSPSPDAVVGD-VRRVREQIEASA-FPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLR---RV---KGLVQAMS 316 (500)
T ss_dssp EEEECCSTTTTHHH-HHHHHHHHHTTT-STTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHH---HH---TTTCSEEE
T ss_pred ccccccCHHHHHHH-HHHHHHHHHHhC-CCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHH---Hh---hhhCceee
Confidence 000000111 112333333333 257999999999876532 1233455565544332 21 12356778
Q ss_pred eeeeccCC----C--ccCCCCceEEcCC
Q 014151 375 IWQLFVEG----M--EEYNDDFGIVPWE 396 (430)
Q Consensus 375 ~W~~~~~~----~--~~~~dg~~i~~~~ 396 (430)
+|++.+.. . ..+.++|++...+
T Consensus 317 ~w~~~d~~~~~~~~~~~~~~~fGll~~~ 344 (500)
T 4ekj_A 317 YWTYSDLFEEPGPPTAPFQGGFGLMNPQ 344 (500)
T ss_dssp ESCSBSCCCTTSSCCSSCSSCSCSBCTT
T ss_pred EEEEEeeecccCCCcccccCCCCccccC
Confidence 88887631 1 1234678877554
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.2e-13 Score=136.19 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=155.8
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~ 160 (430)
++.+.| +.++|.|++= ++..|..++|++|+|+ |..+|++++.|+++||+|..-..- |+. +-|.|....
T Consensus 43 ~~~~l~-~~~fn~vt~e--Ne~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~vrghtlv-W~~-----q~P~W~~~~ 110 (379)
T 1r85_A 43 KDVQML-KRHFNSIVAE--NVMKPISIQPEEGKFN---FEQADRIVKFAKANGMDIRFHTLV-WHS-----QVPQWFFLD 110 (379)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEECSC-CST-----TCCGGGGBC
T ss_pred HHHHHH-HhhCCeEEEC--CcccHHHhcCCCCccC---chhHHHHHHHHHHCCCEEEEeccc-ccc-----cCchhhhcC
Confidence 445555 5599999981 1235778899999998 788999999999999999764322 532 236787531
Q ss_pred --CCCCCCCCC-C--CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHH
Q 014151 161 --GIGISSSND-S--FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDW 229 (430)
Q Consensus 161 --G~~~~~~~~-~--f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w 229 (430)
|.+.....+ . ..+.+..++.++++++.+++| |++ .|..|++.|||...... + ...+ .+|
T Consensus 111 ~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~ 180 (379)
T 1r85_A 111 KEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVER--------YKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDY 180 (379)
T ss_dssp TTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHH
T ss_pred cCCccccccccccccCCCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEeecccccCCCCccCchHHHhhhHHH
Confidence 211000000 0 123456889999999999999 998 89999999999764210 0 0111 368
Q ss_pred HHHHHHHHHh-cCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcch
Q 014151 230 IDEMSAFVKS-IDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEF 304 (430)
Q Consensus 230 ~~~~~~~Ir~-~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~ 304 (430)
+..+.+++|+ .||+..+.+.. |+...+ ..-... ..+++.+ ..-.||.+++ |.-.. + + +
T Consensus 181 i~~af~~Ar~~adP~a~L~~ND---yn~~~~-------~k~~~~--~~~v~~l~~~g~piDgIG~Q~H~~~~-~-p--~- 243 (379)
T 1r85_A 181 IKVAFQAARKYGGDNIKLYMND---YNTEVE-------PKRTAL--YNLVKQLKEEGVPIDGIGHQSHIQIG-W-P--S- 243 (379)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEE---SCTTST-------THHHHH--HHHHHHHHHTTCCCCEEEECCEECSS-S-S--C-
T ss_pred HHHHHHHHHhhCCCCCEEEecc---cccccc-------hhHHHH--HHHHHHHHHCCCceeEEEEeEEecCC-C-C--C-
Confidence 8899999999 99999888753 221111 100000 0111111 1223798888 54221 1 1 1
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC------CC------ChhHHHHHHHHHHHHHHHHHhcCCC-cc
Q 014151 305 EDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK------GF------EPSLRDKLYKTILDIVYKSAKRKRS-GA 371 (430)
Q Consensus 305 ~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~------~~------~~~~r~~~~~~~~~~~~~~~~~~~~-~~ 371 (430)
.+- +++.++.... +|+||.|+|+++..... +. .++.+.++|+.++..+.+. +. +.
T Consensus 244 ---~~~----~~~~l~~~a~-lGlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~----~~~V~ 311 (379)
T 1r85_A 244 ---EAE----IEKTINMFAA-LGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKL----SDKIS 311 (379)
T ss_dssp ---HHH----HHHHHHHHHH-TTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHT----GGGEE
T ss_pred ---HHH----HHHHHHHHHh-cCCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhC----cCcee
Confidence 111 3333344443 89999999999986531 00 1356788888888777653 24 55
Q ss_pred cceeeeeccC
Q 014151 372 GALIWQLFVE 381 (430)
Q Consensus 372 G~~~W~~~~~ 381 (430)
|.++|.+.+.
T Consensus 312 git~WG~~D~ 321 (379)
T 1r85_A 312 NVTFWGIADN 321 (379)
T ss_dssp EEEESSSSTT
T ss_pred EEEEeCCcCC
Confidence 6999999985
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3e-13 Score=135.17 Aligned_cols=245 Identities=17% Similarity=0.201 Sum_probs=154.8
Q ss_pred HHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWE 159 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~ 159 (430)
.+.+.+ +.++|.+++= ++..|..++|++|+|+ |..+|++++.|+++||+|.. +|. |.. +.|.|...
T Consensus 52 ~~~~l~-~~~fn~vt~e--N~~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtlv--W~~-----q~P~W~~~ 118 (378)
T 1ur1_A 52 RLNTLI-AKEFNSITPE--NCMKWGVLRDAQGQWN---WKDADAFVAFGTKHNLHMVGHTLV--WHS-----QIHDEVFK 118 (378)
T ss_dssp HHHHHH-HHHCSEEEES--STTSHHHHBCTTCCBC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SSCGGGTB
T ss_pred HHHHHH-HccCCeEEEC--CcccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEeeccc--ccc-----cCchhhhc
Confidence 344555 5599999981 1235788899999999 78899999999999999975 332 532 24778742
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHHHHHH
Q 014151 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDWIDEM 233 (430)
Q Consensus 160 ~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w~~~~ 233 (430)
. ....-++.+..++.++++++.+++| ||+ .|.+|++.|||...... + .+.+ .++++..
T Consensus 119 d------~~g~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~a 182 (378)
T 1ur1_A 119 N------ADGSYISKAALQKKMEEHITTLAGR--------YKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNA 182 (378)
T ss_dssp C------TTSCBCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHH
T ss_pred C------CCCCCCCHHHHHHHHHHHHHHHHHH--------hCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHH
Confidence 1 0011245678999999999999999 998 79999999999864210 1 1111 3678888
Q ss_pred HHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchhhhHHHH
Q 014151 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFEDDLKFV 311 (430)
Q Consensus 234 ~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~ 311 (430)
.+++|+.||+..+.++. |+...+. ... .. ...++.+ ..-.||.++++.+.....+. . +
T Consensus 183 f~~Ar~~dP~a~L~~Nd---yn~~~~~-----k~~-~~---~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~--~----~-- 242 (378)
T 1ur1_A 183 FTLANEVDPKAHLMYND---YNIERTG-----KRE-AT---VEMIERLQKRGMPIHGLGIQGHLGIDTPP--I----A-- 242 (378)
T ss_dssp HHHHHHHCTTSEEEEEE---SSTTSTT-----HHH-HH---HHHHHHHHHTTCCCCEEEECCEEESSCSC--H----H--
T ss_pred HHHHHHhCCCCEEEecc---ccccccc-----hhH-HH---HHHHHHHHHCCCCcceEEecCcCCCCCCC--H----H--
Confidence 99999999999888753 2211110 000 00 0111111 22348998885332110111 1 1
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEecCCCCCCC------------------------CCC---hhHHHHHHHHHHHHHHHHH
Q 014151 312 TKWMLSHIEDGDKELNKPVFFTEYGLSNLIK------------------------GFE---PSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 312 ~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~------------------------~~~---~~~r~~~~~~~~~~~~~~~ 364 (430)
.+++.++...+ .|+||.|+|+++..... +.+ ++.+.++|+.++..+.+.
T Consensus 243 --~i~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~QA~~y~~~~~~~~~~- 318 (378)
T 1ur1_A 243 --EIEKSIIAFAK-LGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKH- 318 (378)
T ss_dssp --HHHHHHHHHHT-TTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred --HHHHHHHHHHh-cCCeEEEEecccCCCCccccccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc-
Confidence 13344444443 89999999999876421 011 345677777777766543
Q ss_pred hcCCC-cccceeeeeccC
Q 014151 365 KRKRS-GAGALIWQLFVE 381 (430)
Q Consensus 365 ~~~~~-~~G~~~W~~~~~ 381 (430)
+. +.|.++|.+.+.
T Consensus 319 ---~~~V~git~WG~~D~ 333 (378)
T 1ur1_A 319 ---SDKIDRATFWGVSDD 333 (378)
T ss_dssp ---TTTEEEEEESCSBGG
T ss_pred ---cCceeEEEEECCccC
Confidence 34 456999999885
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.3e-13 Score=133.97 Aligned_cols=249 Identities=17% Similarity=0.183 Sum_probs=155.3
Q ss_pred HHHHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe-ccCCcccCCCcchhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS-LVNNLQAYGGKTQYVNWAW 158 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~-l~~~w~~~gg~~~y~~W~~ 158 (430)
.+.+.+ +.++|.|++ .. ..|..++|++|+|+ |..+|++++.|+++||+|..- |. |.. +.|.|..
T Consensus 33 ~~~~l~-~~~fn~vt~en~---~kW~~~ep~~G~~~---f~~~D~~v~~a~~~gi~v~ghtlv--W~~-----q~P~W~~ 98 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENA---MKPVSLQPREGEWN---WEGADKIVEFARKHNMELRFHTLV--WHS-----QVPEWFF 98 (356)
T ss_dssp HHHHHH-HHHCSEEEESST---TSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEECCSE--ESS-----SCCGGGG
T ss_pred HHHHHH-HhcCCEEEECCc---ccHHHhcCCCCccC---chHHHHHHHHHHHCCCEEEEeecc--ccc-----cCchhHh
Confidence 444555 679999997 22 24778899999998 788999999999999999763 32 531 3467875
Q ss_pred h--hCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-H
Q 014151 159 E--EGIGISSSNDS---FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-Q 227 (430)
Q Consensus 159 ~--~G~~~~~~~~~---f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~ 227 (430)
. .|.+....... -.+.+..++.++++++.+++| |++ .|.+|++.|||...... + ...+ .
T Consensus 99 ~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~r--------Y~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~ 168 (356)
T 2uwf_A 99 IDENGNRMVDETDPEKRKANKQLLLERMENHIKTVVER--------YKD--DVTSWDVVNEVIDDDGGLRESEWYQITGT 168 (356)
T ss_dssp BCTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTT
T ss_pred cCCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHH--------cCC--cceEEEeecccccCCCCcccchHHhhccH
Confidence 3 12111000000 123456789999999999999 997 89999999999764210 1 0111 3
Q ss_pred HHHHHHHHHHHh-cCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCc
Q 014151 228 DWIDEMSAFVKS-IDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDL 302 (430)
Q Consensus 228 ~w~~~~~~~Ir~-~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~ 302 (430)
+|+..+.+++|+ .||+..+.+.. |+.. .+..-... ..+++.+ ..-.||-+++ |..... +
T Consensus 169 ~~i~~af~~Ar~~~dP~a~L~~Nd---yn~~-------~~~k~~~~--~~~v~~l~~~G~~idgiG~Q~H~~~~~--p-- 232 (356)
T 2uwf_A 169 DYIKVAFETARKYGGEEAKLYIND---YNTE-------VPSKRDDL--YNLVKDLLEQGVPIDGVGHQSHIQIGW--P-- 232 (356)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEE---SCTT-------SHHHHHHH--HHHHHHHHHTTCCCCEEEECCEEESSC--S--
T ss_pred HHHHHHHHHHHhhCCCCCEEEecc---cccc-------ccchhHHH--HHHHHHHHHCCCcccEEEEEEecCCCC--C--
Confidence 688899999999 99998887753 1211 11000000 0111111 1223788888 765321 1
Q ss_pred chhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC----------C---ChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 303 EFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG----------F---EPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 303 ~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~----------~---~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
+. +- +++.++...+ +|+||.|+|+++...... . .++.++++|+.++..+.+. .+.
T Consensus 233 ~~----~~----~~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~---~~~ 300 (356)
T 2uwf_A 233 SI----ED----TRASFEKFTS-LGLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEEL---SAT 300 (356)
T ss_dssp CH----HH----HHHHHHHHHT-TTCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHT---GGG
T ss_pred CH----HH----HHHHHHHHHh-cCCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhc---cCC
Confidence 11 11 2333344443 899999999998764210 0 1345677777777766542 124
Q ss_pred cccceeeeeccC
Q 014151 370 GAGALIWQLFVE 381 (430)
Q Consensus 370 ~~G~~~W~~~~~ 381 (430)
+.|.++|.+.|.
T Consensus 301 v~git~WG~~D~ 312 (356)
T 2uwf_A 301 ISSVTFWGIADN 312 (356)
T ss_dssp EEEEEESSSSTT
T ss_pred EEEEEEECCCCC
Confidence 789999999985
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3.7e-13 Score=133.24 Aligned_cols=245 Identities=15% Similarity=0.173 Sum_probs=154.1
Q ss_pred HHHHHHHHcCCCEEEE-ccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhh
Q 014151 81 AMLQAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~-~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~ 159 (430)
++.+.+ ..++|.+++ .. ..|..++|.+| |+ |..+|++++.|+++||+|..-... |+. ..+.|.|...
T Consensus 29 ~~~~~~-~~~fn~vt~en~---~kW~~~ep~~G-~~---f~~~D~~v~~a~~~gi~v~ghtl~-W~~---~~q~P~W~~~ 96 (348)
T 1w32_A 29 ARQNIV-RAEFNQITAENI---MKMSYMYSGSN-FS---FTNSDRLVSWAAQNGQTVHGHALV-WHP---SYQLPNWASD 96 (348)
T ss_dssp HHHHHH-HHHCSEEEESST---TSGGGGEETTE-EC---CHHHHHHHHHHHHTTCEEEEEEEE-CCC---GGGCCTTCST
T ss_pred HHHHHH-HhhCCeEEECCc---cchhhhccCCC-CC---chHHHHHHHHHHHCCCEEEEEeee-cCc---cccCchhhhc
Confidence 444445 568999998 22 24888999999 88 788999999999999999763211 532 1234677631
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC-----C-----C---C--hH
Q 014151 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS-----D-----P---S--GD 224 (430)
Q Consensus 160 ~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~-----~-----~---~--~~ 224 (430)
.+++.++..+++++.+++| |++ .|..|++.|||.... . . + .+
T Consensus 97 -------------~~~~~~~~~~~~i~~v~~r--------Y~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~ 153 (348)
T 1w32_A 97 -------------SNANFRQDFARHIDTVAAH--------FAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYR 153 (348)
T ss_dssp -------------TCTTHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHH
T ss_pred -------------CCHHHHHHHHHHHHHHHHH--------hCC--ceeEEEeecccccCCccccCCcccccccccchHHH
Confidence 1245899999999999999 986 799999999987532 1 0 0 12
Q ss_pred HH--HHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCC
Q 014151 225 TL--QDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHW 298 (430)
Q Consensus 225 ~~--~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w 298 (430)
.+ .+|+..+.+++|+.||+..+.+.. |+... +|..-... ..+++.+ ..-.||.+++ |+....
T Consensus 154 ~lgG~~~i~~aF~~Ar~adP~a~L~~ND---yn~~~------~~~k~~~~--~~~v~~l~~~G~~iDgiG~Q~H~~~~~- 221 (348)
T 1w32_A 154 QFGGPEYIDEAFRRARAADPTAELYYND---FNTEE------NGAKTTAL--VNLVQRLLNNGVPIDGVGFQMHVMNDY- 221 (348)
T ss_dssp HHTSTHHHHHHHHHHHHHCTTSEEEEEE---SSTTS------CSHHHHHH--HHHHHHHHHTTCCCCEEEECCEEESSS-
T ss_pred hcCchHHHHHHHHHHHHhCCCCEEEecc---ccccc------CCchHHHH--HHHHHHHHHCCCcccEEEeccccCCCC-
Confidence 23 468889999999999999888753 22110 11100000 0111111 1223898888 653321
Q ss_pred CCCcchhhhHHHHHHHHHHHHHhhh--hcCCCcEEEEecCCCCCCC----------C--------CChhHHHHHHHHHHH
Q 014151 299 FHDLEFEDDLKFVTKWMLSHIEDGD--KELNKPVFFTEYGLSNLIK----------G--------FEPSLRDKLYKTILD 358 (430)
Q Consensus 299 ~~~~~~~~~~~~~~~~l~~~~~~a~--~~~gkPv~v~EfG~~~~~~----------~--------~~~~~r~~~~~~~~~ 358 (430)
+. . +- +++.++... . .|+||.|+|+++..... + ..++.+.++|+.++.
T Consensus 222 -p~--~----~~----~~~~l~~~a~~~-~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~ 289 (348)
T 1w32_A 222 -PS--I----AN----IRQAMQKIVALS-PTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQ 289 (348)
T ss_dssp -SC--H----HH----HHHHHHHHHTTC-SSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHH
T ss_pred -CC--H----HH----HHHHHHHHhccc-CCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHH
Confidence 11 1 11 233333333 4 89999999999876431 0 113456777777777
Q ss_pred HHHHHHhcCCCcccceeeeeccCCCccCC
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVEGMEEYN 387 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~~~~~~~ 387 (430)
.+.+. ...+.+.|.++|.+.+. .+|-
T Consensus 290 ~~~~~-~~~~~v~git~WG~~D~--~sW~ 315 (348)
T 1w32_A 290 AYLEV-VPPGRRGGITVWGIADP--DSWL 315 (348)
T ss_dssp HHHHH-SCTTCEEEEEESCSBGG--GSTT
T ss_pred HHhcc-ccCCceEEEEEECCccC--CccC
Confidence 66421 11235889999999986 4563
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6.9e-12 Score=123.47 Aligned_cols=235 Identities=15% Similarity=0.255 Sum_probs=148.8
Q ss_pred cCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCC
Q 014151 89 MGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSS 167 (430)
Q Consensus 89 ~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~ 167 (430)
..+|.+.. - ++..|..++|++|+|+ +...|++++.|+++||+|.. +|. |.. +.|.|... |.
T Consensus 56 ~~Fn~~t~-e-N~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtLv--Wh~-----q~P~W~~~-~~----- 117 (341)
T 3niy_A 56 REFNILTP-E-NQMKWDTIHPERDRYN---FTPAEKHVEFAEENNMIVHGHTLV--WHN-----QLPGWITG-RE----- 117 (341)
T ss_dssp HHCSEEEE-S-STTSHHHHCCBTTEEE---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SCCHHHHT-SC-----
T ss_pred HhCCEEEE-C-cccchHHhcCCCCccC---hHHHHHHHHHHHHCCCeEEeeecc--ccc-----cCchhhhc-CC-----
Confidence 46999986 1 1224778899999998 67789999999999999965 443 421 34778752 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHHHHHHHHHHHhcC
Q 014151 168 NDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDWIDEMSAFVKSID 241 (430)
Q Consensus 168 ~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w~~~~~~~Ir~~d 241 (430)
++.++.++.++++++.+++| |++ .|.+|++.|||...... + ...+ .+|+..+.+++|+.|
T Consensus 118 ----~~~~~~~~~~~~~i~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~d 183 (341)
T 3niy_A 118 ----WTKEELLNVLEDHIKTVVSH--------FKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEAD 183 (341)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH--------TTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHHHHHHH--------cCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHC
Confidence 45678999999999999999 987 69999999999753210 0 0111 368889999999999
Q ss_pred CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHH
Q 014151 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 242 p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
|+..+.+.. |+...+ +...=.+ ..+++.+ ..-.||-+++..+-..-..+ . + -+.+.+
T Consensus 184 P~a~L~~ND---yn~e~~-----~~k~~~~---~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~--~----~----~~~~~l 242 (341)
T 3niy_A 184 PDAILIYND---YSIEEI-----NAKSNFV---YNMIKELKEKGVPVDGIGFQMHIDYRGLN--Y----D----SFRRNL 242 (341)
T ss_dssp TTSEEEEEE---SSCSSS-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEETTCCC--H----H----HHHHHH
T ss_pred CCceEEeec---cccccC-----chHHHHH---HHHHHHHHHCCCCcceEeeeeecCCCCCC--H----H----HHHHHH
Confidence 998888753 221110 0000000 0111111 11237766554432110111 0 1 123333
Q ss_pred HhhhhcCCCcEEEEecCCCCCCCC---CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIKG---FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+...+ +|+||.|+|+++....+. ..++.+.++|+.++..+++ .+.+.|.++|.+.|.
T Consensus 243 ~~~a~-lGl~v~iTElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~----~~~v~git~Wg~~D~ 302 (341)
T 3niy_A 243 ERFAK-LGLQIYITEMDVRIPLSGSEDYYLKKQAEICAKIFDICLD----NPAVKAIQFWGFTDK 302 (341)
T ss_dssp HHHHH-TTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHT----CTTEEEEEESCSBTT
T ss_pred HHHHH-cCCeEEEEeccccCCCCCChhHHHHHHHHHHHHHHHHHhc----CCCeEEEEEECCccC
Confidence 44443 899999999998653211 0134567777777776654 357999999999986
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.3e-11 Score=119.17 Aligned_cols=240 Identities=16% Similarity=0.223 Sum_probs=149.0
Q ss_pred HcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCC
Q 014151 88 KMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISS 166 (430)
Q Consensus 88 ~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~ 166 (430)
..-+|.+-. - ++..|..++|++|+|+ +...|++++.|+++||+|.- +|. |+. +.|.|....+
T Consensus 36 ~~~Fn~~t~-e-N~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrGHtLv--Wh~-----q~P~W~~~~~----- 98 (327)
T 3u7b_A 36 KNEIGSITP-E-NAMKWEAIQPNRGQFN---WGPADQHAAAATSRGYELRCHTLV--WHS-----QLPSWVANGN----- 98 (327)
T ss_dssp TTTCCEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEEEEEE--EST-----TCCHHHHTCC-----
T ss_pred HhhCCeEEE-C-ccccHHHhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeeee--cCC-----cCcHHHhcCC-----
Confidence 446887775 1 2234778899999998 67789999999999999864 342 531 3478875310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-ChHHH-----HHHHHHHHHHHHhc
Q 014151 167 SNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-SGDTL-----QDWIDEMSAFVKSI 240 (430)
Q Consensus 167 ~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-~~~~~-----~~w~~~~~~~Ir~~ 240 (430)
++.++.++.++++++.++.| |++ .|.+||+.|||...... ....+ .+|+....++.|+.
T Consensus 99 -----~~~~~l~~~~~~~I~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~ 163 (327)
T 3u7b_A 99 -----WNNQTLQAVMRDHINAVMGR--------YRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAA 163 (327)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhH
Confidence 34577899999999999999 987 69999999999753210 00111 25788889999999
Q ss_pred CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCC--CCCCcchhhhHHHHHHH
Q 014151 241 DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDH--WFHDLEFEDDLKFVTKW 314 (430)
Q Consensus 241 dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~--w~~~~~~~~~~~~~~~~ 314 (430)
||+..+.+.. |+...+ +...=.. ..+++.+ ..-.||-+++ |+..+. ..... .+. .+ .
T Consensus 164 dP~a~L~~Nd---yn~e~~-----~~k~~~~---~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~-~p~-~~----~ 226 (327)
T 3u7b_A 164 DPTTKLYYND---YNLEYG-----NAKTEGA---KRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTP-TPS-RA----K 226 (327)
T ss_dssp CTTSEEEEEE---SSCTTC-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSC-CCC-HH----H
T ss_pred CCCCeEEecc---ccccCC-----chhhHHH---HHHHHHHHHCCCCcceEEEcccccccccccccCC-CCC-HH----H
Confidence 9999888753 221111 0000000 0111111 1112676544 655410 00000 000 11 1
Q ss_pred HHHHHHhhhhcCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 315 MLSHIEDGDKELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 315 l~~~~~~a~~~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.+.++...+ +|+||.|+|+++....+. ..++.|.++|+.++..+.+. +.+.|.++|.+.|.
T Consensus 227 ~~~~l~~~a~-lGl~v~iTElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~----~~v~gIt~WG~~D~ 290 (327)
T 3u7b_A 227 LASVLQGLAD-LGVDVAYTELDIRMNTPATQQKLQTNADAYARIVGSCMDV----KRCVGITVWGISDK 290 (327)
T ss_dssp HHHHHHHHHT-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHC----TTEEEEEESCSBGG
T ss_pred HHHHHHHHHh-cCCceEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhC----CCceEEEEEccCcC
Confidence 3334444443 899999999999763221 12356677788777766553 46899999999886
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.4e-11 Score=119.17 Aligned_cols=245 Identities=17% Similarity=0.251 Sum_probs=152.5
Q ss_pred HHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCC
Q 014151 84 QAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGI 162 (430)
Q Consensus 84 ~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~ 162 (430)
..+-...+|.+.. - ++..|..++|++|+|+ |...|++++.|+++||+|.. +|. |+. +.|.|....
T Consensus 30 ~~~~~~~Fn~~t~-e-N~mKW~~iep~~G~~~---f~~~D~~v~~a~~~gi~vrgHtLv--Wh~-----q~P~W~~~~-- 95 (331)
T 3emz_A 30 GEFIAKHYNSVTA-E-NQMKFEEVHPREHEYT---FEAADEIVDFAVARGIGVRGHTLV--WHN-----QTPAWMFED-- 95 (331)
T ss_dssp HHHHHHHCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEECCSB--CSS-----SCCGGGGBC--
T ss_pred HHHHHHhCCEEEE-C-cccchhhhcCCCCccC---hhHHHHHHHHHHHCCCEEeeeeee--ccc-----cCcHhHhcc--
Confidence 4444667999997 1 1224778899999999 66789999999999999865 332 531 347787421
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---Ch----HHH-HHHHHHHH
Q 014151 163 GISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SG----DTL-QDWIDEMS 234 (430)
Q Consensus 163 ~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~----~~~-~~w~~~~~ 234 (430)
.....++.++.++.++++++.+++| ||+ .|.+|++.|||...... .. ..+ ..|+....
T Consensus 96 ----~~g~~~~~~~l~~~~~~~I~~v~~r--------Ykg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF 161 (331)
T 3emz_A 96 ----ASGGTASREMMLSRLKQHIDTVVGR--------YKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAF 161 (331)
T ss_dssp ----TTSSBCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHH
T ss_pred ----ccCCCCCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHH
Confidence 0001234457899999999999999 997 79999999999753210 00 111 25788888
Q ss_pred HHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEE--eeecCCCCCCCcchhhhHHH
Q 014151 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFAS--VHIYPDHWFHDLEFEDDLKF 310 (430)
Q Consensus 235 ~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s--~H~Y~~~w~~~~~~~~~~~~ 310 (430)
++.|+.||+..+.+.. |+.. ++..-... ..+++.+ ..-.||-++ .|+.... +. . +
T Consensus 162 ~~Ar~adP~a~L~~ND---yn~~-------~~~k~~~~--~~~v~~l~~~GvpidgiG~Q~H~~~~~--p~--~----~- 220 (331)
T 3emz_A 162 NMAHEADPNALLFYND---YNET-------DPVKREKI--YNLVRSLLDQGAPVHGIGMQGHWNIHG--PS--M----D- 220 (331)
T ss_dssp HHHHHHCTTSEEEEEE---SSCS-------SHHHHHHH--HHHHHHHHHHTCCCCEEEECCEEETTB--SC--H----H-
T ss_pred HHHHhhCCCceEEecc---cccc-------ChHHHHHH--HHHHHHHHHCCCccceEEECceecCCC--CC--H----H-
Confidence 9999999999888753 2211 11100000 0111111 111267665 5543321 11 1 1
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC--------CCCh---hHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK--------GFEP---SLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~--------~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
.+++.++...+ +|+||.|+|+.+..... +.++ +.+.+.|+.++..+.+. .+.+.|..+|.+.
T Consensus 221 ---~~~~~l~~~a~-lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~---~~~v~giT~WG~~ 293 (331)
T 3emz_A 221 ---EIRQAIERYAS-LDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREY---RSNITSVTFWGVA 293 (331)
T ss_dssp ---HHHHHHHHHHT-TSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEESSSS
T ss_pred ---HHHHHHHHHHH-cCCcEEEeecccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc---CCCeeEEEEECCC
Confidence 23344444443 89999999999875421 1122 45677777777766552 2357899999999
Q ss_pred cCCCccC
Q 014151 380 VEGMEEY 386 (430)
Q Consensus 380 ~~~~~~~ 386 (430)
|. .+|
T Consensus 294 D~--~sW 298 (331)
T 3emz_A 294 DN--YTW 298 (331)
T ss_dssp TT--CCG
T ss_pred CC--Ccc
Confidence 86 355
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-11 Score=127.09 Aligned_cols=125 Identities=11% Similarity=0.188 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEE--EeccC------Ccc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLL--LSLVN------NLQ 145 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vi--l~l~~------~w~ 145 (430)
..+.++++++.||++|+|+||+.+. |..++|. ||+|| |+.+|++|+.|+++||+|| |.+|. .|.
T Consensus 27 ~~~~w~~dl~~mk~~Gln~Vr~~V~----W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~ 99 (516)
T 1vem_A 27 NWETFENDLRWAKQNGFYAITVDFW----WGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDC 99 (516)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc----hhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCC
Confidence 5789999999999999999999663 8889999 99999 6778999999999999999 77642 111
Q ss_pred cCCCcchhhhhhhhhCC--CC---C--C----CCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeE------
Q 014151 146 AYGGKTQYVNWAWEEGI--GI---S--S----SNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA------ 208 (430)
Q Consensus 146 ~~gg~~~y~~W~~~~G~--~~---~--~----~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~------ 208 (430)
.++ .|.|....+. .+ + + ....++.+....+.|.++++.+++| |+++|.|++
T Consensus 100 -~~~---lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r--------~~~~~~vI~eI~vgl 167 (516)
T 1vem_A 100 -NVP---IPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAA--------MKPYKDVIAKIYLSG 167 (516)
T ss_dssp -CBC---CCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHH--------TGGGGGGBCCEEECC
T ss_pred -CCC---CCHHHHhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHH--------HccCCCEEEEeeccc
Confidence 122 3678765321 00 0 0 0112244556789999999999999 999999999
Q ss_pred ----------EeecCCCCCC
Q 014151 209 ----------WELINEPRCM 218 (430)
Q Consensus 209 ----------wel~NEp~~~ 218 (430)
|++.||..+.
T Consensus 168 G~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 168 GPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp SGGGBSSCCCCCTTTTCCTT
T ss_pred cccccccccccccccCcCCC
Confidence 9999998664
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=99.10 E-value=6.3e-10 Score=109.11 Aligned_cols=233 Identities=14% Similarity=0.180 Sum_probs=145.6
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSN 168 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 168 (430)
.+|.+.. - ++..|..++|++|+|+ +...|++++.|+++||+|.- +|. |+. +.|.|....+
T Consensus 40 ~Fn~~t~-e-N~mKW~~~ep~~G~~~---f~~aD~~v~~a~~~gi~vrGHtLv--Wh~-----q~P~W~~~~~------- 100 (335)
T 4f8x_A 40 NFGEITP-A-NAMKFMYTETEQNVFN---FTEGEQFLEVAERFGSKVRCHNLV--WAS-----QVSDFVTSKT------- 100 (335)
T ss_dssp HCSEEEE-S-STTSGGGTEEETTEEC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SCCHHHHTSC-------
T ss_pred hCCEEEE-C-CccchHHhCCCCCccC---cchhHHHHHHHHHCCCEEEEeeec--ccc-----cCcHHHhcCC-------
Confidence 5898886 1 1235888999999998 67789999999999999854 232 531 3478875311
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHHHHHHHHHHHhc--
Q 014151 169 DSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDWIDEMSAFVKSI-- 240 (430)
Q Consensus 169 ~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w~~~~~~~Ir~~-- 240 (430)
++.++.++.++++++.++.| |++ .|.+||+.|||-..... + ...+ .+|+....++.|+.
T Consensus 101 ---~~~~~l~~~~~~~I~~v~~r--------Y~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~ 167 (335)
T 4f8x_A 101 ---WTAKELTAVMKNHIFKTVQH--------FGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALA 167 (335)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHH--------HGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHHH--------hCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhcc
Confidence 34567899999999999999 997 69999999999753210 1 0111 25777788888888
Q ss_pred ---CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEE--eeecCCCCCCCcchhhhHHHHHH
Q 014151 241 ---DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFAS--VHIYPDHWFHDLEFEDDLKFVTK 313 (430)
Q Consensus 241 ---dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s--~H~Y~~~w~~~~~~~~~~~~~~~ 313 (430)
||+..+.+.. |+...+ ++..=.. ..+++.+ ..-.||-++ .|+....+ +. . +
T Consensus 168 ~~~dP~a~L~~ND---Yn~e~~-----~~k~~~~---~~lv~~l~~~gvpidgiG~Q~H~~~~~~-p~--~----~---- 225 (335)
T 4f8x_A 168 QIGANDVKLYYND---YGIENP-----GTKSTAV---LQLVSNLRKRGIRIDGVGLESHFIVGET-PS--L----A---- 225 (335)
T ss_dssp HTTCTTSEEEEEE---SSCSSS-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEETTCC-CC--H----H----
T ss_pred ccCCCCcEEEEec---ccccCC-----cHhHHHH---HHHHHHHHHCCCCcceeeeeeeecCCCC-CC--H----H----
Confidence 9998887753 221111 0000000 0111111 111266554 45543321 11 1 1
Q ss_pred HHHHHHHhhhhcCCCcEEEEecCCCCCC-CCCC---hhHHHHHHHHHHHHHHHHHhcCC-CcccceeeeeccC
Q 014151 314 WMLSHIEDGDKELNKPVFFTEYGLSNLI-KGFE---PSLRDKLYKTILDIVYKSAKRKR-SGAGALIWQLFVE 381 (430)
Q Consensus 314 ~l~~~~~~a~~~~gkPv~v~EfG~~~~~-~~~~---~~~r~~~~~~~~~~~~~~~~~~~-~~~G~~~W~~~~~ 381 (430)
.+.+.++...+ +|+||.|+|+.+.... +.++ .+.+.+.|+.++..+.+. + .+.|..+|.+.|.
T Consensus 226 ~~~~~l~~~a~-lGl~v~iTElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~----~~~v~git~WG~~D~ 293 (335)
T 4f8x_A 226 DQLATKQAYIK-ANLDVAVTELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMNA----GPRCIGVVVWDFDDA 293 (335)
T ss_dssp HHHHHHHHHHH-TTCEEEEEEEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHT----CTTEEEEEESCSBGG
T ss_pred HHHHHHHHHHH-cCCeeEEeeccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC----cCCeeEEEEEcCccC
Confidence 12333333343 8999999999997652 1112 345667777777766543 3 5889999999986
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-09 Score=113.53 Aligned_cols=252 Identities=12% Similarity=0.191 Sum_probs=149.2
Q ss_pred cCCCEEEEccccCCCCCccccCCCC------CChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhC
Q 014151 89 MGLTVCRTWAFNDGGYNSLQISPGQ------FDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEG 161 (430)
Q Consensus 89 ~G~n~vR~~~~~~g~~~~~~~~pg~------~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G 161 (430)
..+|.|.. - ++.-|..+++.+|. |+ |...|++++.|+++||+|.- +|. |+. +.|.|....+
T Consensus 214 ~~Fn~it~-e-N~mKw~~~e~~~g~~~~~~~~~---f~~aD~~v~~A~~ngi~vrGHtLv--Whs-----q~P~W~~~~~ 281 (540)
T 2w5f_A 214 REFNSITC-E-NEMKPDATLVQSGSTNTNIRVS---LNRAASILNFCAQNNIAVRGHTLV--WHS-----QTPQWFFKDN 281 (540)
T ss_dssp HHCSEEEE-S-STTSHHHHEEEEEEETTEEEEC---CTTTHHHHHHHHHTTCEEEEEEEE--CSS-----SCCGGGGBTT
T ss_pred HhCCeecc-c-ccccccccccCCCCccccceec---hhHHHHHHHHHHHCCCEEEEEEEE--cCC-----CCchHHhccC
Confidence 36888775 1 11235556666663 55 66789999999999999853 222 532 3477875422
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC-C--ceeEEeecCCCCCCCC------C--C-------h
Q 014151 162 IGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND-P--TIFAWELINEPRCMSD------P--S-------G 223 (430)
Q Consensus 162 ~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p--~I~~wel~NEp~~~~~------~--~-------~ 223 (430)
. .....+.+.+..++.++++|+.++.| |+++ | .|.+||+.|||-.... . . .
T Consensus 282 ~---~~~g~~~~~~~l~~~l~~~I~~vv~r--------y~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~ 350 (540)
T 2w5f_A 282 F---QDNGNWVSQSVMDQRLESYIKNMFAE--------IQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGR 350 (540)
T ss_dssp S---STTSCBCCHHHHHHHHHHHHHHHHHH--------HHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTB
T ss_pred c---ccccCcCCHHHHHHHHHHHHHHHHHH--------hcccCCCCcEEEEEEecCcccCCccccccccccccccccccC
Confidence 1 01111222345789999999999999 8874 4 4999999999975430 0 0 1
Q ss_pred HHHH------HHHHHHHHHHHhcCCC-CEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc-CCCCcceEE--eee
Q 014151 224 DTLQ------DWIDEMSAFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS-NNDNIDFAS--VHI 293 (430)
Q Consensus 224 ~~~~------~w~~~~~~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~-~~~~iD~~s--~H~ 293 (430)
..+. +|+..+.++.|+.||+ ..+.+.. |+.. .+..-... .+.+..+ ...-||-++ .|+
T Consensus 351 s~w~~~~G~~~~i~~aF~~Ar~~dP~~a~L~~ND---yn~~-------~~~k~~~~--~~lv~~l~~~gvIdgiG~Q~H~ 418 (540)
T 2w5f_A 351 SPWVQIYGDNKFIEKAFTYARKYAPANCKLYYND---YNEY-------WDHKRDCI--ASICANLYNKGLLDGVGMQSHI 418 (540)
T ss_dssp BHHHHHHSSTTHHHHHHHHHHHHSCTTCEEEEEE---SSTT-------SHHHHHHH--HHHHHHHHHTTCCCEEEECCEE
T ss_pred CHHHHhhCcHHHHHHHHHHHHHhCCccceEEEEe---cccc-------cccHHHHH--HHHHHHHHhCCcccEEEEeeEe
Confidence 1221 6888899999999997 6666542 2211 11000000 0111111 111267554 565
Q ss_pred cCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHh--cCCCcc
Q 014151 294 YPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAK--RKRSGA 371 (430)
Q Consensus 294 Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~ 371 (430)
-...-.. .. .+- +++.++...+ +|+||.|+|+++.......+++.++++|+.++..+++..+ ..+.+.
T Consensus 419 ~~~~~~~-~~----~~~----~~~~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~ 488 (540)
T 2w5f_A 419 NADMNGF-SG----IQN----YKAALQKYIN-IGCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVT 488 (540)
T ss_dssp ESCSSST-TC----HHH----HHHHHHHHHT-TTSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEE
T ss_pred cCCCCCC-CC----HHH----HHHHHHHHHh-cCCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCcee
Confidence 4321000 01 111 2333333343 8999999999998764444577889999999988765322 223578
Q ss_pred cceeeeeccCCCccCC
Q 014151 372 GALIWQLFVEGMEEYN 387 (430)
Q Consensus 372 G~~~W~~~~~~~~~~~ 387 (430)
|.++|.+.+. ..|-
T Consensus 489 git~WG~~D~--~sW~ 502 (540)
T 2w5f_A 489 AVCVWGPNDA--NTWL 502 (540)
T ss_dssp EEEESSSSTT--SCTT
T ss_pred EEEEEcCCCC--Cccc
Confidence 9999999986 4563
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.8e-07 Score=95.82 Aligned_cols=177 Identities=15% Similarity=0.190 Sum_probs=99.4
Q ss_pred HHHHHHHHHcCCCEEEEcc--ccCC-CCC----ccccCCCCCC------hHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 80 GAMLQAGAKMGLTVCRTWA--FNDG-GYN----SLQISPGQFD------ERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~--~~~g-~~~----~~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+.++.++++|+..||++. |.++ .|. +.+..|+.++ +...-.+|++++.|++.|+.+++.+.-.
T Consensus 62 ~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g--- 138 (513)
T 2c7f_A 62 KDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLG--- 138 (513)
T ss_dssp HHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCS---
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCC---
Confidence 3457788999999999963 3332 232 1223444322 1222256999999999999999988421
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC-CC-ceeEEeecCCCCCC---CCC
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN-DP-TIFAWELINEPRCM---SDP 221 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~-~p-~I~~wel~NEp~~~---~~~ 221 (430)
.++.+....|..-.-.+ . + ..|..+-.+ ++. .| .|--|+|+|||... ...
T Consensus 139 ~~~~~~a~~~vey~n~~----~-----~--------t~~~~lR~~--------~G~~ep~~vkyweiGNE~~g~w~~g~~ 193 (513)
T 2c7f_A 139 TRGISDACNLLEYCNHP----G-----G--------SKYSDMRIK--------HGVKEPHNIKVWCLGNAMDGPWQVGHK 193 (513)
T ss_dssp SCCHHHHHHHHHHHHCC----S-----S--------SHHHHHHHH--------TTCCSCCCCCEEEESCCCCCTTSTTCC
T ss_pred CCCHHHHHHHHHHhCCC----C-----C--------ChHHHHHHH--------cCCCCCCCceEEEeccCcccccccCCC
Confidence 12222122222110000 0 0 011122233 433 23 57889999999742 122
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCCE-EEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC
Q 014151 222 SGDTLQDWIDEMSAFVKSIDKKHL-VTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 222 ~~~~~~~w~~~~~~~Ir~~dp~~l-V~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~ 297 (430)
+++.+.+.+++.+++||+.||+.. |..|..+ ...+ ....|.. .+.. ...+.+|++++|.|+..
T Consensus 194 t~~~Y~~~~~~~a~a~k~~dP~i~via~G~~~---~~~~-----~~~~W~~----~~l~-~~~~~vD~is~H~Y~~~ 257 (513)
T 2c7f_A 194 TMDEYGRIAEETARAMKMIDPSIELVACGSSS---KDMP-----TFPQWEA----TVLD-YAYDYVDYISLHQYYGN 257 (513)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTCEEEECCCSC---TTST-----TTTHHHH----HHHH-HHTTTCCEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCC---CCCc-----ccCchHH----HHHH-hcccCCCEEEEeecCCC
Confidence 467788888999999999999854 4334321 1111 0124543 2222 22367999999999753
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.6e-07 Score=94.74 Aligned_cols=176 Identities=16% Similarity=0.205 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCCEEEEcc--ccCC-CCC----ccccCCCCCC------hHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 81 AMLQAGAKMGLTVCRTWA--FNDG-GYN----SLQISPGQFD------ERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 81 ~~~~~~~~~G~n~vR~~~--~~~g-~~~----~~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+.++.++++|+..||++. |.++ .|. +.+..|+.++ +...-.+|++++.|++.|+.+++.+.-. .
T Consensus 55 d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g---~ 131 (502)
T 1qw9_A 55 DVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLG---T 131 (502)
T ss_dssp HHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCS---S
T ss_pred HHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCC---C
Confidence 456778999999999963 3332 232 1223444322 1122257999999999999999988421 1
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC-CC-ceeEEeecCCCCCC---CCCC
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN-DP-TIFAWELINEPRCM---SDPS 222 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~-~p-~I~~wel~NEp~~~---~~~~ 222 (430)
|+......|..-.-.+ . + ..|..+-.+ ++. .| .|-.|+|+|||... ...+
T Consensus 132 ~~~~~a~~~vey~n~~----~-----~--------t~~~~lR~~--------~G~~ep~~v~yweiGNE~~g~w~~g~~t 186 (502)
T 1qw9_A 132 RGIDAARNLVEYCNHP----S-----G--------SYYSDLRIA--------HGYKEPHKIKTWCLGNAMDGPWQIGHKT 186 (502)
T ss_dssp CCHHHHHHHHHHHHCC----S-----S--------SHHHHHHHH--------TTCCSCCCCCEEEESSCCCSTTSTTCCC
T ss_pred CCHHHHHHHHHHhCCC----C-----C--------CcHHHHHHH--------cCCCCCCCCeEEEEeCCCCCCcCCCCcC
Confidence 2221112222100000 0 0 011122223 443 35 78899999999742 1224
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCEEE-EccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC
Q 014151 223 GDTLQDWIDEMSAFVKSIDKKHLVT-VGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 223 ~~~~~~w~~~~~~~Ir~~dp~~lV~-~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~ 297 (430)
++.+.+.+++.+++||+.||+..|. .|.. ....+ ....|.. .+... ..+.+|++++|.|+..
T Consensus 187 ~~~Y~~~~~~~a~aik~~dP~i~via~G~~---~~~~p-----~~~~W~~----~~l~~-~~~~vD~is~H~Y~~~ 249 (502)
T 1qw9_A 187 AVEYGRIACEAAKVMKWVDPTIELVVCGSS---NRNMP-----TFAEWEA----TVLDH-TYDHVDYISLHQYYGN 249 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEECCCS---CTTST-----TTTHHHH----HHHHH-HGGGCSEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeCCC---cccCc-----ccCchHH----HHHHh-cccCCCEEEEeeCCCC
Confidence 6778888899999999999985443 3321 11111 1124543 22221 2357999999999753
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.7e-07 Score=92.01 Aligned_cols=242 Identities=17% Similarity=0.210 Sum_probs=136.1
Q ss_pred HcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCC
Q 014151 88 KMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISS 166 (430)
Q Consensus 88 ~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~ 166 (430)
..-+|.|-. - ++.-|..++|.+|+|+ |...|++++.|+++||+|.- +|. |+. +.|.|...... .
T Consensus 35 ~~~Fn~it~-E-N~mKw~~~ep~~G~~~---f~~aD~~v~~a~~ngi~vrGHtLv--Wh~-----q~P~W~~~~~d---~ 99 (341)
T 3ro8_A 35 KMHHDVVTA-G-NAMKPDALQPTKGNFT---FTAADAMIDKVLAEGMKMHGHVLV--WHQ-----QSPAWLNTKKD---D 99 (341)
T ss_dssp HHHCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SCCGGGTEEEC---T
T ss_pred HHhCCEEEE-C-cccchhHhcCCCCccc---hHHHHHHHHHHHhCCCEEEecccc--Ccc-----cCCHHHhccCc---c
Confidence 345888875 1 1224777899999998 77899999999999999853 222 532 34678743100 0
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCC---------hHHH-----HHHHH
Q 014151 167 SND-SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPS---------GDTL-----QDWID 231 (430)
Q Consensus 167 ~~~-~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~---------~~~~-----~~w~~ 231 (430)
... ...+.++.++.++++|+.+++| |++ .|.+|++.||+-...... ...+ ..|+.
T Consensus 100 ~g~~~~~s~~~l~~~~~~hI~~vv~r--------Ykg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~ 169 (341)
T 3ro8_A 100 NNNTVPLGRDEALDNLRTHIQTVMKH--------FGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVE 169 (341)
T ss_dssp TSCEEECCHHHHHHHHHHHHHHHHHH--------HGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHH--------cCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHH
Confidence 000 0133456889999999999999 987 699999999996432100 0111 24667
Q ss_pred HHHHHHHhc-----CCCCEEEEccCCccCCCCCCCcccCccchhhccC-cchhhccC---------CCCcceE--Eeeec
Q 014151 232 EMSAFVKSI-----DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALG-SDFIRNSN---------NDNIDFA--SVHIY 294 (430)
Q Consensus 232 ~~~~~Ir~~-----dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g-~df~~~~~---------~~~iD~~--s~H~Y 294 (430)
...++.|+. ||+..+.+-. |+.. ++.. ..+ ...++.+. .-.||=+ +.|+-
T Consensus 170 ~AF~~Ar~a~~~~pdp~akL~~ND---Yn~~-------~~~k---~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~ 236 (341)
T 3ro8_A 170 QAFLAAREVLDENPSWNIKLYYND---YNED-------NQNK---ATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYN 236 (341)
T ss_dssp HHHHHHHHHHHHSTTCCCEEEEEE---SCTT-------SHHH---HHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEE
T ss_pred HHHHHHHHhcccCCCCCcEEEEec---CCCc-------ccch---HHHHHHHHHHHHHhhhcccCCCCccceeeechhcc
Confidence 777778887 6677766632 2211 1100 000 01111110 2246654 44654
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-CCCh---hHHHHHHHHHHHHHHHHHhcCCCc
Q 014151 295 PDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-GFEP---SLRDKLYKTILDIVYKSAKRKRSG 370 (430)
Q Consensus 295 ~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-~~~~---~~r~~~~~~~~~~~~~~~~~~~~~ 370 (430)
... .. + .+++.++...+ +|+||.|+|+-+..... ..++ ..+...|+.++..+.+.. ..+
T Consensus 237 ~~~-----~~----~----~~~~~l~~~a~-lGl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~---~~v 299 (341)
T 3ro8_A 237 INT-----NP----D----NVKLSLEKFIS-LGVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHA---DHI 299 (341)
T ss_dssp TTC-----CH----H----HHHHHHHHHHT-TTCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTG---GGE
T ss_pred CCC-----CH----H----HHHHHHHHHHH-cCCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc---CCc
Confidence 321 11 1 13334444443 89999999999875431 1111 235566777777665532 137
Q ss_pred ccceeeeeccCCCccC
Q 014151 371 AGALIWQLFVEGMEEY 386 (430)
Q Consensus 371 ~G~~~W~~~~~~~~~~ 386 (430)
.|..+|.+.|. .+|
T Consensus 300 ~giT~WG~~D~--~sW 313 (341)
T 3ro8_A 300 ARVTFWGMDDN--TSW 313 (341)
T ss_dssp EEEEEC----------
T ss_pred eEEEEeCCCCC--Ccc
Confidence 89999999986 456
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.8e-07 Score=95.53 Aligned_cols=178 Identities=19% Similarity=0.195 Sum_probs=99.6
Q ss_pred HHHHHHHHHcCCCEEEEcc--ccCC-CCC----ccccCCCCCC------hHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 80 GAMLQAGAKMGLTVCRTWA--FNDG-GYN----SLQISPGQFD------ERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~--~~~g-~~~----~~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+.++.++++|+..||+.. |.++ .|. +.+..|+.++ +...-.+|++++.|++.|+.+++.+.- -
T Consensus 94 ~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~---G 170 (574)
T 2y2w_A 94 QDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNM---G 170 (574)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECC---S
T ss_pred HHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeC---C
Confidence 3456778999999999942 2221 232 1233454432 122224799999999999999998842 1
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC-CC-ceeEEeecCCCCCC---CCC
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN-DP-TIFAWELINEPRCM---SDP 221 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~-~p-~I~~wel~NEp~~~---~~~ 221 (430)
.|+...-..|..-.-.+. + ..|..+-.+ ++. .| .|--|+|+||+... ...
T Consensus 171 ~~~~~ea~dwveY~n~~~---------~--------t~w~~lR~~--------~G~~ep~~vkyweIGNE~~g~W~~G~~ 225 (574)
T 2y2w_A 171 TRGLKAALDELEYVNGAP---------G--------TAWADQRVA--------NGIEEPMDIKMWCIGNEMDGPWQVGHM 225 (574)
T ss_dssp SCCHHHHHHHHHHHHCCT---------T--------SHHHHHHHH--------TTCCSCCCCCEEEESSCTTSTTSTTCC
T ss_pred CCCHHHHHHHHHHhCCCC---------C--------ChHHHHHHH--------cCCCCCcceeEEEeccccccccccCCC
Confidence 122221122221100000 0 011112222 332 34 68899999999742 222
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCC-EEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCC
Q 014151 222 SGDTLQDWIDEMSAFVKSIDKKH-LVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHW 298 (430)
Q Consensus 222 ~~~~~~~w~~~~~~~Ir~~dp~~-lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w 298 (430)
+++.+.+-+++.+++||++||+. +|..|..+. ..| ....|.. .+... ..+.+|++++|.|+..+
T Consensus 226 t~e~Y~~~~~~~a~AiK~vdP~i~via~G~~~~---~~p-----~~~~W~~----~~l~~-~~~~vD~vs~H~Y~~~~ 290 (574)
T 2y2w_A 226 SPEEYAGAVDKVAHAMKLAESGLELVACGSSGA---YMP-----TFGTWEK----TVLTK-AYENLDFVSCHAYYFDR 290 (574)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTCEEEEECCSCT---TST-----TTTHHHH----HHHHH-HGGGCCEEEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEEecCCcc---cCc-----cccchHH----HHHHh-cccCCCEEEEeecCCCc
Confidence 45678888899999999999985 444443211 111 0124543 12221 23579999999998653
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.3e-06 Score=82.30 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcc-----ccC-C-CCCcc-----c---cCCCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWA-----FND-G-GYNSL-----Q---ISPGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~-----~~~-g-~~~~~-----~---~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.+.+++.|+.+.+.|.|+||+-+ |.. + .| .+ | ..||..--+.-.+|-++++.|++||++||++=
T Consensus 36 f~DLD~afdEavERGYNTVRIcAmP~LLf~~p~~l~-~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSS 114 (393)
T 3gyc_A 36 YEDWDQVLDELSERGYNAIRIDAYPHLIAENPMKKW-LLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSS 114 (393)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEECCHHHHHHCTTCCE-EECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred hhHHHHHHHHHHHcCCCeEEeccccceeecCCcchh-hccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEeh
Confidence 57799999999999999999933 211 1 11 01 1 23433333456688999999999999999973
Q ss_pred cCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 141 VNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDP-SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 141 ~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~-~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
| |--- + ......-..+ ...+...+.++.|.++ +-..+|..-||.||-....
T Consensus 115 ---W--YQQs---p-----------seal~a~~R~e~lA~aw~~lLdfi~~~---------GL~drIAyVELhNEv~~~~ 166 (393)
T 3gyc_A 115 ---W--YRLD---V-----------DEVCLKLDTPEKLADCWLTILRSIEED---------GLLDTILYVDLCNEWPGDS 166 (393)
T ss_dssp ---C--CCCB---T-----------TCGGGGCCSHHHHHHHHHHHHHHHHHT---------TCGGGEEEEESSTTTTCTT
T ss_pred ---h--hhcC---H-----------HHHHhhhccHHHHHHHHHHHHHHHHHc---------cchhceeeEeeeccccCcc
Confidence 4 2100 0 0111112233 3556666777777665 5566999999999965432
Q ss_pred CC---------------ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCC
Q 014151 220 DP---------------SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNND 284 (430)
Q Consensus 220 ~~---------------~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~ 284 (430)
.. ..+.++.|+++..+++|+.-|+.+|+... ..... ..| +.+...
T Consensus 167 la~~~~~~~~~vg~~a~~~e~l~~~lee~v~~lR~~hP~lpvt~Sy----T~~~~---------------~~~-~~~d~s 226 (393)
T 3gyc_A 167 WAPFFAKTYPNVGWGNWYKEESLRWMKTSLEKMRQVYPDMPFLYSF----DHGDV---------------KKY-EEVDCS 226 (393)
T ss_dssp TCHHHHTTCTTTCTTCTTSHHHHHHHHHHHHHHHTTCTTSCEECCB----CCSCT---------------THH-HHSCCT
T ss_pred cccccCccccccccchhhhHhhhHHHHHHHHHHHHhCCCCeeeeee----ccchh---------------hhh-hccCch
Confidence 10 23588999999999999999999998743 11110 012 224567
Q ss_pred CcceEEeeecCC
Q 014151 285 NIDFASVHIYPD 296 (430)
Q Consensus 285 ~iD~~s~H~Y~~ 296 (430)
.+||+.+|.+-.
T Consensus 227 fldfle~h~wm~ 238 (393)
T 3gyc_A 227 FLDLYEHHIWMA 238 (393)
T ss_dssp TCSSEEBCCCGG
T ss_pred HHhhhhhHHHhh
Confidence 789999998753
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-05 Score=80.79 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHH-----------HHcCCCEEEEcccc----CCCCC-------cc---ccCCCCCChHHHHHHHHHHHHH
Q 014151 75 SRARVGAMLQAG-----------AKMGLTVCRTWAFN----DGGYN-------SL---QISPGQFDERVFKALDHVIVEA 129 (430)
Q Consensus 75 ~~~~~~~~~~~~-----------~~~G~n~vR~~~~~----~g~~~-------~~---~~~pg~~de~~l~~lD~~l~~A 129 (430)
+.+.-++.++.+ +.+|++.+|+.+-+ .+.+. .+ ...++.||...-.....+++.|
T Consensus 38 ~~~~r~~il~~lF~~~~~~~g~~~Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A 117 (507)
T 3clw_A 38 PQEKKEKIADLLFKREFDEKGNPIGMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAA 117 (507)
T ss_dssp CHHHHHHHHHHHHCCCBCTTSCBCSCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcccccCCCCCceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHH
Confidence 345555566666 46899999996522 11111 11 1123456543323345789999
Q ss_pred HHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeE
Q 014151 130 RKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFA 208 (430)
Q Consensus 130 ~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~ 208 (430)
+++|...|+.+ .|.. |.|....|...+......--.++..+.|.+|+..++++ |+.+- .|-+
T Consensus 118 ~~~~~~~i~as--pWSp-------P~wMk~ng~~~~~~g~~~~L~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~ 180 (507)
T 3clw_A 118 RERGMNNFLFF--TNSA-------PYFMTRSASTVSTDQDCINLQNDKFDDFARFLVKSAQH--------FREQGFHVNY 180 (507)
T ss_dssp HHTTCCCEEEE--CSSC-------CGGGSSSSSSSCCCSSSCSSCTTCHHHHHHHHHHHHHH--------HHHTTCCEEE
T ss_pred HHcCCCeEEEe--CCCC-------cHHhccCCCccCCCCccccCChHHHHHHHHHHHHHHHH--------HHHcCCceeE
Confidence 99988533322 2532 45665433211100111112467788899999999998 88553 4777
Q ss_pred EeecCCC--CCC---CC----CChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 209 WELINEP--RCM---SD----PSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 209 wel~NEp--~~~---~~----~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
+.+.||| ... .. -.++...+|++.+..++++..++.-|.++
T Consensus 181 is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~kI~~~ 230 (507)
T 3clw_A 181 ISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTKILIP 230 (507)
T ss_dssp EECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred eeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 8889999 432 11 14677889999999999998887666665
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=7.3e-06 Score=84.51 Aligned_cols=237 Identities=15% Similarity=0.093 Sum_probs=124.6
Q ss_pred HHHHHHHHHcCC-CEEEEcccc--CC-CCC----ccccCCC-CCCh-----------HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 80 GAMLQAGAKMGL-TVCRTWAFN--DG-GYN----SLQISPG-QFDE-----------RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 80 ~~~~~~~~~~G~-n~vR~~~~~--~g-~~~----~~~~~pg-~~de-----------~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
.+.++.+|+++. -.||+ .-+ |. .|. +.+.+|- .+++ -.-..+|++++.|++-|.++++.
T Consensus 60 ~~v~~l~k~L~~~~~lR~-GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~ 138 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRI-GGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYG 138 (488)
T ss_dssp HHHHHHHHHHCSSCEEEE-ESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHhCCCeEEEe-CccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEE
Confidence 467778899999 99998 421 11 121 1111111 0110 01234999999999999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC-
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM- 218 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~- 218 (430)
+.- |. .+++- ..+.++.+... ..+ -.|..|||+|||+..
T Consensus 139 lN~-----g~-----------------------~~~~~---a~~~v~y~~~~-------~~~--~~l~~welGNEpd~~~ 178 (488)
T 3vny_A 139 LNL-----GK-----------------------GTPEN---AADEAAYVMET-------IGA--DRLLAFQLGNEPDLFY 178 (488)
T ss_dssp ECT-----TT-----------------------SCHHH---HHHHHHHHHHH-------HCT--TTEEEEEESSCGGGHH
T ss_pred EeC-----CC-----------------------CCHHH---HHHHHHHHhhc-------ccC--CceeEEEecCcccccc
Confidence 742 10 12221 23334443331 011 269999999999732
Q ss_pred ------CCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEee
Q 014151 219 ------SDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVH 292 (430)
Q Consensus 219 ------~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H 292 (430)
..-+++...+-.++.+++||+.+|+..+ +|.... + +..|.. .|... ....||+++.|
T Consensus 179 ~~G~~~~~~t~~~Y~~~~~~~a~a~k~~~p~~~l-~gp~~~-~----------~~~w~~----~~l~~-~~~~vd~vS~H 241 (488)
T 3vny_A 179 RNGIRPASYDFAAYAGDWQRFFTAIRKRVPNAPF-AGPDTA-Y----------NTKWLV----PFADK-FKHDVKFISSH 241 (488)
T ss_dssp HHSSSCTTCCHHHHHHHHHHHHHHHHHHCTTCCE-EEEEES-S----------CGGGHH----HHHHH-TGGGCSEEEEE
T ss_pred cCCccCCCCCHHHHHHHHHHHHHHHHhhCCCCeE-EeCCCC-C----------CchhhH----HHHHh-cCccCCEEEEe
Confidence 1113455656567799999999997543 332111 1 124543 23332 34679999999
Q ss_pred ecCCC-CC-CCcchhhhH---HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC--CCCChhHHHHHHHHHHHHHHHHHh
Q 014151 293 IYPDH-WF-HDLEFEDDL---KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI--KGFEPSLRDKLYKTILDIVYKSAK 365 (430)
Q Consensus 293 ~Y~~~-w~-~~~~~~~~~---~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~--~~~~~~~r~~~~~~~~~~~~~~~~ 365 (430)
+|+.. .. +..+.+.-+ ..+.+.+....+.+++ .++|++|+|++..... ++.++..-..+. +++.+...+.
T Consensus 242 ~Y~~g~~~~~~~t~~~ll~~~~~l~~~~~~~~~~~~~-~g~p~~lgEtnsa~~~G~~~vs~tf~aalw--~~D~~~~~a~ 318 (488)
T 3vny_A 242 YYAEGPPTDPSMTIERLMKPNPRLLGETAGLKQVEAD-TGLPFRLTETNSCYQGGKQGVSDTFAAALW--AGDLMYQQAA 318 (488)
T ss_dssp EEEECCTTCTTCCHHHHTSCCHHHHHHHHHHHHHHHH-HCCCEEEEEEEEESTTCCTTTTTSTHHHHH--HHHHHHHHHH
T ss_pred eCCCCCCCCCCcCHHHHcCchHHHHHHHHHHHHHHhc-CCCCEEEeccccCCCCCCCCcCHHHHHHHH--HHHHHHHHHH
Confidence 99852 11 111111100 1122223322223333 7999999999986543 233333333322 1223333333
Q ss_pred cCCCcccceeeeec
Q 014151 366 RKRSGAGALIWQLF 379 (430)
Q Consensus 366 ~~~~~~G~~~W~~~ 379 (430)
. +.....+++..
T Consensus 319 ~--g~~~v~~h~g~ 330 (488)
T 3vny_A 319 A--GSTGINFHGGG 330 (488)
T ss_dssp H--TCCCEEEECCT
T ss_pred c--CCcEEEEEccc
Confidence 3 35566666554
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.1e-06 Score=85.79 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ccccCC--CCCc-cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRT-WAFNDG--GYNS-LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~-~~~~~g--~~~~-~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~g 148 (430)
.++.++|+++|+.||++|++.|=+ +..-++ -|+. +....+.+.+ ..+.|+.++++|+++||+|.+.|...
T Consensus 50 nWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p-~~Dlv~~~l~aa~k~Gmkv~~Gly~S----- 123 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMP-SVDLVDMYLRLAEKYNMKFYFGLYDS----- 123 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCC-SBCHHHHHHHHHHHTTCEEEEECCBC-----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCC-cccHHHHHHHHHHHhCCeEEEecCCC-----
Confidence 468999999999999999996633 222222 1211 0111222322 24569999999999999999987531
Q ss_pred CcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc-CCCceeEEeecCCCCCCCCCChHHHH
Q 014151 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR-NDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 149 g~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk-~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
+ ..|.. +. +. . ..+.-+..++++.++ |+ +||++.+|-+-||+.... ....
T Consensus 124 ~----~~W~~--~d---------~~-~-e~e~~~~~i~El~~~--------Yg~~h~af~GWYi~~Ei~~~~----~~~~ 174 (340)
T 4h41_A 124 G----RYWDT--GD---------LS-W-EIEDNKYVIDEVWKM--------YGEKYKSFGGWYISGEISRAT----KGAI 174 (340)
T ss_dssp S----HHHHH--SC---------GG-G-GHHHHHHHHHHHHHH--------TTTTCTTEEEEEECCCCSSCC----TTHH
T ss_pred h----hhcCC--CC---------HH-H-HHHHHHHHHHHHHHH--------hhccCCCeeEEEeccccCchh----hhHH
Confidence 1 12421 10 11 1 245557788899999 98 699999999999997643 3457
Q ss_pred HHHHHHHHHHHhcCCCCEEEEc
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
.+.+.++..+|++.|+.++.+.
T Consensus 175 ~~~~~l~~~lk~ls~~lp~~IS 196 (340)
T 4h41_A 175 DAFRAMGKQCKDISNGLPTFIS 196 (340)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEC
T ss_pred HHHHHHHHHHHHhcCCCceEEe
Confidence 7899999999999999888774
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.38 E-value=5.9e-06 Score=84.90 Aligned_cols=242 Identities=19% Similarity=0.235 Sum_probs=129.5
Q ss_pred HHHHHHHHHcCCCEEEEcc--ccCC-CCC----ccccCCCCCC------hHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 80 GAMLQAGAKMGLTVCRTWA--FNDG-GYN----SLQISPGQFD------ERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~--~~~g-~~~----~~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+.++.+++++..++|+.. |.++ .|. +.+..|+..+ +..-=.+|+++++|++.|..+++.+...
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~fG~~Ef~~~~e~~gaep~~~vN~G--- 147 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRFGTDEFIEYCREIGAEPYISINMG--- 147 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEECCCS---
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCCCHHHHHHHHHHhCCeEEEEEECC---
Confidence 3457778999999999953 2221 232 2223343221 1111147999999999999999987431
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc---ccc-CCC-ceeEEeecCCCCCCC--
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV---EYR-NDP-TIFAWELINEPRCMS-- 219 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~---~yk-~~p-~I~~wel~NEp~~~~-- 219 (430)
.|+.+ ...++++.+.....+.-|. +.+ ..| .|-.|+|+||+....
T Consensus 148 ~g~~~----------------------------ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~ 199 (504)
T 3ug3_A 148 TGTLD----------------------------EALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQV 199 (504)
T ss_dssp SCCHH----------------------------HHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTST
T ss_pred CCCHH----------------------------HHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccc
Confidence 12211 1122333322221111110 011 123 588899999997432
Q ss_pred -CCChHHHHHHHHHHHHHHHhcCCCCEE-EEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC
Q 014151 220 -DPSGDTLQDWIDEMSAFVKSIDKKHLV-TVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 220 -~~~~~~~~~w~~~~~~~Ir~~dp~~lV-~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~ 297 (430)
..+++...+-+++.+++||+.||+..| .+|. + .| .|.. .+... ....+|++++|+|...
T Consensus 200 G~~t~e~Y~~~~~~~a~Aik~~dP~I~lia~G~------~-------~~-~W~~----~~l~~-~~~~vD~vs~H~Y~~~ 260 (504)
T 3ug3_A 200 GHMTADEYARAAKEYTKWMKVFDPTIKAIAVGC------D-------DP-IWNL----RVLQE-AGDVIDFISYHFYTGS 260 (504)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCC------S-------CH-HHHH----HHHHH-HTTTCSEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCcEEEEECC------C-------Cc-chhH----HHHHh-cccCCCEEEEeeCCCc
Confidence 224567777889999999999999544 3321 1 12 3542 12222 2357999999999753
Q ss_pred CCCCcchhhhHHHHHHHHHHHHH-------hhhh--cCCCcEEEEecCCCCCCC-C---CChhHHHHHHHH-HHHHHHHH
Q 014151 298 WFHDLEFEDDLKFVTKWMLSHIE-------DGDK--ELNKPVFFTEYGLSNLIK-G---FEPSLRDKLYKT-ILDIVYKS 363 (430)
Q Consensus 298 w~~~~~~~~~~~~~~~~l~~~~~-------~a~~--~~gkPv~v~EfG~~~~~~-~---~~~~~r~~~~~~-~~~~~~~~ 363 (430)
..+-. ...+...++.+.. .... ..+.+|.++||+...... + ..-.-++++... .+..+.++
T Consensus 261 ----~~~l~-~~~~d~~i~~~~~~vr~~~d~~~~~~~~~i~i~vdEwn~w~~~~~~~l~~~~t~~dAl~~A~~L~~~~r~ 335 (504)
T 3ug3_A 261 ----DDYYE-TVSTVYLLKERLIGVKKLIDMVDTARKRGVKIALDEWNVWYRVSDNKLEEPYDLKDGIFACGVLVLLQKM 335 (504)
T ss_dssp ----SSHHH-HHTHHHHHHHHHHHHHHHHHTSHHHHHHTCEEEEEEEEECCSCCSSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHh-hccHHHHHHHHHHHHHHHHHHhhhhcCCCCceEeeccccccccCCccccccCCHHHHHHHHHHHHHHHhc
Confidence 11211 1122334443332 1111 124689999999864321 0 001234444333 23333333
Q ss_pred HhcCCCcccceeeeec
Q 014151 364 AKRKRSGAGALIWQLF 379 (430)
Q Consensus 364 ~~~~~~~~G~~~W~~~ 379 (430)
...+..+.+|++.
T Consensus 336 ---~D~V~mA~~A~lv 348 (504)
T 3ug3_A 336 ---SDIVPLANLAQLV 348 (504)
T ss_dssp ---TTTCCEEEESCSB
T ss_pred ---cCceeEEehhhhh
Confidence 3457888999885
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.32 E-value=9.5e-06 Score=83.81 Aligned_cols=170 Identities=14% Similarity=0.186 Sum_probs=94.2
Q ss_pred HHHHHHHHHcCCCEEEEcc--ccCC-CCC----ccccCCCCCC-------hHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 80 GAMLQAGAKMGLTVCRTWA--FNDG-GYN----SLQISPGQFD-------ERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~--~~~g-~~~----~~~~~pg~~d-------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
.+.++.+|++|..+||+.. |.+. .|. +.+..|+.++ +..-=.+|+++++|++.|..+++++..
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~--- 130 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFGTHEFMMLCELLGCEPYISGNV--- 130 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECC---
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCccCHHHHHHHHHHcCCeEEEEEEC---
Confidence 3557788999999999854 3221 232 2233454433 111114599999999999999998843
Q ss_pred cCCCcchhhhhhhh-hCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC-CC-ceeEEeecCCCCCC-CCC
Q 014151 146 AYGGKTQYVNWAWE-EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN-DP-TIFAWELINEPRCM-SDP 221 (430)
Q Consensus 146 ~~gg~~~y~~W~~~-~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~-~p-~I~~wel~NEp~~~-~~~ 221 (430)
-.|..+.-..|..- .| + .. . .|..+-.+ ++. .| .|-.|+|+||+... ...
T Consensus 131 g~g~~~ea~d~veY~n~-~----~~----t---------~w~~lRa~--------~G~~eP~~vkyweiGNE~~g~~g~~ 184 (496)
T 2vrq_A 131 GSGTVQEMSEWVEYITF-D----GE----S---------PMANWRRE--------NGREKPWRIKYWGVGNQNWGCGGNM 184 (496)
T ss_dssp SSCCHHHHHHHHHHHHC-C----SB----S---------HHHHHHHH--------TTCCSCCCCCEEEECSCTTTTTTCC
T ss_pred CCCcHHHHHHHHHHhCC-C----CC----C---------hHHHHHHH--------cCCCCCCCceEEEEcCcccccCCCC
Confidence 12222222223221 01 0 00 0 11111112 222 22 47889999999642 222
Q ss_pred ChHHHHHHHHHHHHHHHhc-CCCCE-EEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecC
Q 014151 222 SGDTLQDWIDEMSAFVKSI-DKKHL-VTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYP 295 (430)
Q Consensus 222 ~~~~~~~w~~~~~~~Ir~~-dp~~l-V~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~ 295 (430)
+++...+-+++.+++||++ ||+.. |..|..+ ....|.. .+... ..+.+|++++|+|+
T Consensus 185 ~~~~Y~~~~~~~a~a~k~~~dp~i~~ia~G~~~------------~~~~W~~----~~l~~-~~~~~D~vs~H~Y~ 243 (496)
T 2vrq_A 185 RAEYYADLYRQFQTYLRNYGDNKLHKIACGANT------------ADYHWTE----VLMKQ-AAPFMHGLSLHYYT 243 (496)
T ss_dssp CHHHHHHHHHHHHHTCCCCTTCCCEEEEEEEET------------TCHHHHH----HHHHH-HGGGCSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCC------------CCcchHH----HHHHh-CCCCCCEEEEeecC
Confidence 4566777778999999999 88643 3344211 0124543 12221 23469999999995
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=98.31 E-value=4.2e-05 Score=74.17 Aligned_cols=231 Identities=13% Similarity=0.053 Sum_probs=129.7
Q ss_pred EeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 59 NGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 59 ~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+|+-- .+++.++++++.+++ |+.|++.||++.- | ..++.+++..||+|++
T Consensus 3 iGv~yG~---~~~nlp~p~~Vv~ll---ks~gi~~VRlY~~---------------D-------~~vL~Al~~sgi~V~l 54 (323)
T 3ur8_A 3 IGVCYGK---IANNLPSDQDVIKLY---NANNIKKMRIYYP---------------H-------TNVFNALKGSNIEIIL 54 (323)
T ss_dssp EEEEECC---CSSSCCCHHHHHHHH---HHTTCCEEEESSC---------------C-------HHHHHHHTTCCCEEEE
T ss_pred eeEEcCc---CCCCCCCHHHHHHHH---HhCCCCeEEecCC---------------C-------HHHHHHHHhcCCeEEE
Confidence 4888432 233334666666655 7789999999531 1 2678899999999999
Q ss_pred eccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC
Q 014151 139 SLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM 218 (430)
Q Consensus 139 ~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~ 218 (430)
.+.+. + .. . ..+ +....++++.-+.. |.....|....++||.-..
T Consensus 55 GV~n~--~---l~------------------~-la~---~~~A~~WV~~nV~~--------y~~~~~I~~IaVGNEvl~~ 99 (323)
T 3ur8_A 55 DVPNQ--D---LE------------------A-LAN---PSNANGWVQDNIRN--------HFPDVKFKYIAVGNEVDPG 99 (323)
T ss_dssp EECGG--G---TG------------------G-GGS---HHHHHHHHHHHTGG--------GTTTSEEEEEEEEESCCTT
T ss_pred ecccc--c---hh------------------h-hhh---HHHHHHHHHHHHhh--------hCCCceEEEEEEccccccC
Confidence 88541 0 00 0 111 33445667777777 7666789999999998765
Q ss_pred CCC--ChHHHHHHHHHHHHHHHhcCC--CCEEEEccC-CccCCCCCCCcccCccc--hhhccCcchhhc---cCCCCcce
Q 014151 219 SDP--SGDTLQDWIDEMSAFVKSIDK--KHLVTVGLE-GFYGPKSPKRLTVNPEM--WASALGSDFIRN---SNNDNIDF 288 (430)
Q Consensus 219 ~~~--~~~~~~~w~~~~~~~Ir~~dp--~~lV~~G~~-g~~~~~~~~~~~~np~~--w~~~~g~df~~~---~~~~~iD~ 288 (430)
... ....+...++.+.+++++..= +..|++... +.+..+.| |+. +.... ..+... ......|+
T Consensus 100 ~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT~~~~~v~~~s~p------PS~g~F~~~~-~~~~~pil~fL~~~~sp 172 (323)
T 3ur8_A 100 RESGKYARFVGPAMENIYNALSSAGLQNQIKVSTSTYSGLLTNTYP------PRDSIFREEY-KSFINPIIGFLARHNLP 172 (323)
T ss_dssp SGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGEECCSS------GGGCEECGGG-HHHHHHHHHHHHHTTCC
T ss_pred CCcccCHHHHHHHHHHHHHHHHHCCCCCCceeeeeeeccccccCCC------CCcceechhH-HHHHHHHHHHHHhcCCe
Confidence 321 245677788888888887553 467776531 12222221 211 10000 000000 01124567
Q ss_pred EEeeecCCC-CC-CCcchhh--------------hHHHHHHHHHH---HHHhhhhcCCCcEEEEecCCCCCCC-CCChhH
Q 014151 289 ASVHIYPDH-WF-HDLEFED--------------DLKFVTKWMLS---HIEDGDKELNKPVFFTEYGLSNLIK-GFEPSL 348 (430)
Q Consensus 289 ~s~H~Y~~~-w~-~~~~~~~--------------~~~~~~~~l~~---~~~~a~~~~gkPv~v~EfG~~~~~~-~~~~~~ 348 (430)
+.+|.||.. +. .+.+.+. ...++..-+.. .++.+. ..+|||+|+|.|++..+. ..+.+.
T Consensus 173 ~~vN~yPyf~~~~~~~~i~l~yAlf~~~~d~~~~Y~nlfDa~~Da~~~Al~~~g-~~~~~v~vsEtGWPs~G~~~as~~n 251 (323)
T 3ur8_A 173 LLANIYPYFGHIDNTNAVPLSYALFNQQRRNDTGYQNLFDALVDSMYFATEKLG-GQNIEIIVSESGWPSEGHPAATLKN 251 (323)
T ss_dssp EEEECCHHHHHHHCTTTSCHHHHHTCCSSCCTTSCSSHHHHHHHHHHHHHHTTT-CTTCCEEEEEECCCSSSBTTBCHHH
T ss_pred eEEecchhhhhccCCCCCChhhhccccCCCccchHHHHHHHHHHHHHHHHHHcC-CCCceEEeccccCCCCCCCCCCHHH
Confidence 888998741 10 0010000 00111111221 222222 368999999999998753 346778
Q ss_pred HHHHHHHHHHHH
Q 014151 349 RDKLYKTILDIV 360 (430)
Q Consensus 349 r~~~~~~~~~~~ 360 (430)
...|++.+...+
T Consensus 252 a~~y~~~li~~~ 263 (323)
T 3ur8_A 252 ARTYYTNLINHV 263 (323)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777554
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.27 E-value=5.4e-06 Score=80.29 Aligned_cols=127 Identities=10% Similarity=0.039 Sum_probs=82.1
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+- .. +++..+++++ ++.+++.|++.||++.- | ..++.+++..||+|++.
T Consensus 2 Gv~Yg--~~-~~~~ps~~~v---v~llk~~~i~~vRlY~~---------------d-------~~vl~A~~~tgi~v~lg 53 (312)
T 2cyg_A 2 GVCYG--ML-GNNLPPPSEV---VSLYKSNNIARMRLYDP---------------N-------QAALQALRNSNIQVLLD 53 (312)
T ss_dssp EEECC--CC-CSSCCCHHHH---HHHHHHTTCCEEEESSC---------------C-------HHHHHHHTTSCCEEEEE
T ss_pred eEEcc--CC-CCCCCCHHHH---HHHHHhcCCCEEEEcCC---------------C-------HHHHHHHHhcCCEEEEe
Confidence 77742 22 2234566666 66789999999999531 1 15688889999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. + . ..-. .+ ++....+++.-+.+ |.....|....++||.-. .
T Consensus 54 v~n~--~---~---~~~a---------------~~---~~~a~~Wv~~nv~~--------y~~~~~i~~I~VGNEvl~-~ 98 (312)
T 2cyg_A 54 VPRS--D---V---QSLA---------------SN---PSAAGDWIRRNVVA--------YWPSVSFRYIAVGNELIP-G 98 (312)
T ss_dssp ECHH--H---H---HHHH---------------HC---TTHHHHHHHHHTGG--------GTTTSEEEEEEEEESCTT-T
T ss_pred cccc--c---h---hhhh---------------hC---HHHHHHHHHHHHHh--------hCCCceEEEEEecccccc-C
Confidence 7431 0 0 0000 01 12234555665666 655568999999999975 3
Q ss_pred CCChHHHHHHHHHHHHHHHhcCC--CCEEEEc
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDK--KHLVTVG 249 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp--~~lV~~G 249 (430)
......+...++.+.+++++..- ...|++.
T Consensus 99 ~~~~~~L~~am~~v~~aL~~~gl~~~ikVst~ 130 (312)
T 2cyg_A 99 SDLAQYILPAMRNIYNALSSAGLQNQIKVSTA 130 (312)
T ss_dssp STTGGGHHHHHHHHHHHHHHTTCTTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCCeEEEeC
Confidence 33467788899999999987653 3567664
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.11 E-value=2.7e-05 Score=75.08 Aligned_cols=220 Identities=14% Similarity=0.103 Sum_probs=122.9
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+-- .+++.++++++.+ .+++.|++.||++.- | ..++.+++..||+|++.
T Consensus 2 Gv~yg~---~~~nlps~~~vv~---llk~~~i~~vRlY~~---------------d-------~~vL~A~~~tgi~v~lg 53 (306)
T 1ghs_A 2 GVCYGV---IGNNLPSRSDVVQ---LYRSKGINGMRIYFA---------------D-------GQALSALRNSGIGLILD 53 (306)
T ss_dssp EEECCC---CSSSCCCHHHHHH---HHHHHTCCEEEESSC---------------C-------HHHHHHTTTSCCEEEEE
T ss_pred eEEccc---CCCCCcCHHHHHH---HHHhcCCCEEEEcCC---------------C-------HHHHHHHHhcCCEEEEe
Confidence 777432 2223345666654 567899999999431 1 25678889999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. .. ..- ..-++....+++.-+.+ |.....|....++||.-..
T Consensus 54 v~n~-----~~---~~~------------------a~~~~~a~~Wv~~nv~~--------y~~~~~i~~I~VGNEvl~~- 98 (306)
T 1ghs_A 54 IGND-----QL---ANI------------------AASTSNAASWVQNNVRP--------YYPAVNIKYIAAGNEVQGG- 98 (306)
T ss_dssp CCGG-----GH---HHH------------------HHCHHHHHHHHHHHTTT--------TTTTSEEEEEEEEESCCGG-
T ss_pred cccc-----ch---hhh------------------hhCHHHHHHHHHHHHhh--------hCCCceEEEEEEeccccCC-
Confidence 7431 00 000 01123345556666666 6545689999999999653
Q ss_pred CCChHHHHHHHHHHHHHHHhcCC-CCEEEEccC-CccCCCCCCCcccCccchhhccCcch----hhc---cCCCCcceEE
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDK-KHLVTVGLE-GFYGPKSPKRLTVNPEMWASALGSDF----IRN---SNNDNIDFAS 290 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp-~~lV~~G~~-g~~~~~~~~~~~~np~~w~~~~g~df----~~~---~~~~~iD~~s 290 (430)
....+...++.+.+++++..- +..|++... ..+..+.| |+ .| .| ... ......|++.
T Consensus 99 --~~~~L~~am~~v~~aL~~~gl~~ikVst~~~~~~~~~s~p------Ps-----~g-~F~~~~~~p~l~fL~~~~~~~~ 164 (306)
T 1ghs_A 99 --ATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFP------PS-----AG-VFKNAYMTDVARLLASTGAPLL 164 (306)
T ss_dssp --GGGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCSS------GG-----GC-EESSTHHHHHHHHHHHHTCCEE
T ss_pred --CHHHHHHHHHHHHHHHHHCCCCceeEEeccchhhcccCCC------CC-----cc-chhhhhhhHHHHHHHhcCCeeE
Confidence 456788888999999987544 467776431 12222211 21 11 11 000 0012346789
Q ss_pred eeecCCCCCC---C-------------cch-hh-----hHHHHHHHHHH---HHHhhhhcCCCcEEEEecCCCCCCC-CC
Q 014151 291 VHIYPDHWFH---D-------------LEF-ED-----DLKFVTKWMLS---HIEDGDKELNKPVFFTEYGLSNLIK-GF 344 (430)
Q Consensus 291 ~H~Y~~~w~~---~-------------~~~-~~-----~~~~~~~~l~~---~~~~a~~~~gkPv~v~EfG~~~~~~-~~ 344 (430)
+|.||.. .. + ... +. ...++..-+.. .++.+. ..+|||+|+|.|++..+. +.
T Consensus 165 vN~yPyf-~~~~~p~~i~l~yalf~~~~~v~d~~t~~~y~n~fda~~Dav~~al~~~g-~~~~~ivVsEtGWPS~G~~~a 242 (306)
T 1ghs_A 165 ANVYPYF-AYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAG-APAVKVVVSESGWPSAGGFAA 242 (306)
T ss_dssp EECCHHH-HHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHHHHHHHHHHHT-CTTCCEEEEEECCCSSSSTTC
T ss_pred eecChhh-cccCCCCccccchhhcCCCcceeccccccccchHHHHHHHHHHHHHHHcC-CCCCeEEEeeccCCCCCCCCC
Confidence 9998841 10 0 000 00 00111111221 122221 258999999999998763 34
Q ss_pred ChhHHHHHHHHHHH
Q 014151 345 EPSLRDKLYKTILD 358 (430)
Q Consensus 345 ~~~~r~~~~~~~~~ 358 (430)
+.+.+..|++.+..
T Consensus 243 s~~na~~y~~~li~ 256 (306)
T 1ghs_A 243 SAGNARTYNQGLIN 256 (306)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH
Confidence 66777777776654
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=5.5e-05 Score=75.53 Aligned_cols=227 Identities=11% Similarity=0.129 Sum_probs=120.2
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAK-MGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~-~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
+.+..+..|..-.. +|++.+|+.+-+. . ..|+.. ..++..|.++|++++... |..
T Consensus 30 ~~~~r~~lF~~~~G~~g~s~~R~~ig~~-----~----~~~~~~-----~~~~k~A~~~~~~i~asp---WSp------- 85 (383)
T 2y24_A 30 TTEQINTAYGSGVGQIGLSIMRVRIDPD-----S----SKWNIQ-----LPSARQAVSLGAKIMATP---WSP------- 85 (383)
T ss_dssp CHHHHHHHHCCSTTCCCCCEEEEEECSS-----G----GGGGGG-----HHHHHHHHHTTCEEEEEE---SCC-------
T ss_pred CHHHHhcccCCCCCcccceEEEEecCCc-----c----cccccc-----hHHHHHHHhcCCeEEEec---CCC-------
Confidence 34444555543344 8999999954221 0 112211 357788999999887653 532
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC-C----ChHHHH
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD-P----SGDTLQ 227 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~-~----~~~~~~ 227 (430)
|.|....|..... .. -.++..+.|.+|+...+++ |+++- .|-+..+.|||..... + .++..+
T Consensus 86 P~wMk~n~~~~~~--g~--L~~~~~~~yA~Yl~k~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~ 153 (383)
T 2y24_A 86 PAYMKSNNSLING--GR--LLPANYSAYTSHLLDFSKY--------MQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFK 153 (383)
T ss_dssp CGGGBTTSSSBSC--CB--BCGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHH
T ss_pred cHHHhCCCCCCCC--Cc--CCHHHHHHHHHHHHHHHHH--------HHHcCCCeEEecccccCCCCCCCCccCcCHHHHH
Confidence 4566543321100 11 1467888899999999998 87653 4778899999987432 1 245555
Q ss_pred HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhh
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDD 307 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~ 307 (430)
+|++.....++ +.-|..+....+. ..|... -+...-+.+.+|.+++|.|+..- ...+
T Consensus 154 ~fik~~~~~~~----~~kI~~~d~~~~d-----------~~~~~~---~l~d~~a~~~v~~i~~H~Y~~~~---~~~~-- 210 (383)
T 2y24_A 154 SYLKSQGSKFG----SLKVIVAESLGFN-----------PALTDP---VLKDSDASKYVSIIGGHLYGTTP---KPYP-- 210 (383)
T ss_dssp HHHHHHGGGST----TSEEEEEEETTCC-----------GGGTHH---HHTCHHHHTTCCEEEEECTTSCC---CCCH--
T ss_pred HHHHHhhhhhc----CCEEEeecccccc-----------hhcchh---hccCHhHHhhccEEEEecCCCCc---ccch--
Confidence 55554422221 1233333211111 012210 00001134679999999997631 1110
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
.++ ..+|+++++|.+..... +...=.+...+. ..+.+.... +..++++|...+
T Consensus 211 -------------~~~-~~~k~lw~TE~~~~~~~-~~~~w~~~~~~a---~~i~~~l~~--~~~~~~~W~~~~ 263 (383)
T 2y24_A 211 -------------LAQ-NAGKQLWMTEHYVDSKQ-SANNWTSAIEVG---TELNASMVS--NYSAYVWWYIRR 263 (383)
T ss_dssp -------------HHH-HTTCEEEEEEECSCTTS-CTTCHHHHHHHH---HHHHHHHHT--TCSEEEEEESBS
T ss_pred -------------hhh-cCCCeEEEeccccCCCc-ccCchhHHHHHH---HHHHHHHhc--CccEEEEeeccC
Confidence 112 27999999998854221 001111222222 223333333 468999999864
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00061 Score=69.32 Aligned_cols=248 Identities=15% Similarity=0.091 Sum_probs=133.9
Q ss_pred HHHHHHHHHHH---HHcCCCEEEEccccCC----CCCcccc-----CCCCCCh-HHHHHHHHHHHHHHHc--CCEEEEec
Q 014151 76 RARVGAMLQAG---AKMGLTVCRTWAFNDG----GYNSLQI-----SPGQFDE-RVFKALDHVIVEARKN--GVRLLLSL 140 (430)
Q Consensus 76 ~~~~~~~~~~~---~~~G~n~vR~~~~~~g----~~~~~~~-----~pg~~de-~~l~~lD~~l~~A~~~--Gi~vil~l 140 (430)
.+..++.++.+ ..+|++.+|+.+-+.. .|. +.. +.+.|+- .....+-.+++.|+++ +|+++...
T Consensus 65 ~~~r~~il~~lF~~~Glglsi~R~~IG~~d~s~~~ys-y~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~asp 143 (447)
T 2wnw_A 65 EKTKAQFLSLYFSAQEHNYTLARMPIQSCDFSLGNYA-YVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASP 143 (447)
T ss_dssp HHHHHHHHHHHHCTTTTCCCEEEEEESCCSSSSSCCC-SCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHHhccCCCceEEEEEeecCCCCCCCccc-ccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEec
Confidence 44444444443 3589999999653210 011 111 1234442 2223445688888885 57876643
Q ss_pred cCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC
Q 014151 141 VNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS 219 (430)
Q Consensus 141 ~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~ 219 (430)
|.. |.|....|..... . .-.++..+.|.+|+...++. |+++- .|-+..+.|||....
T Consensus 144 ---WSp-------P~wMk~n~~~~~g--g--~L~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~is~qNEP~~~~ 201 (447)
T 2wnw_A 144 ---WSP-------PAFMKTNNDMNGG--G--KLRRECYADWADIIINYLLE--------YRRHGINVQALSVQNEPVAVK 201 (447)
T ss_dssp ---SCC-------CGGGBTTSCSBSC--C--BBCGGGHHHHHHHHHHHHHH--------HHHTTCCCCEEESCSSTTCCC
T ss_pred ---CCC-------cHHhccCCCcCCC--C--cCCHHHHHHHHHHHHHHHHH--------HHHcCCCeeEEeeeccCCCCC
Confidence 532 4565543321100 0 12467888888888888888 77653 477788899998743
Q ss_pred C-----CChHHHHHHHH-HHHHHHHhcCC-CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEee
Q 014151 220 D-----PSGDTLQDWID-EMSAFVKSIDK-KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVH 292 (430)
Q Consensus 220 ~-----~~~~~~~~w~~-~~~~~Ir~~dp-~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H 292 (430)
. -+++..++|++ .+..++++... +.-|....+.. . . .+ .|.... +...-+.+.+|.+++|
T Consensus 202 ~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D~n~-~-~-------~~-~~~~~i---l~d~~a~~~v~~ia~H 268 (447)
T 2wnw_A 202 TWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWDHDK-D-G-------LV-DWAELA---FADEANYKGINGLAFH 268 (447)
T ss_dssp SSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEEEEG-G-G-------HH-HHHHHH---TTSHHHHHHCCEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeCCCc-c-c-------hh-hHHHHH---hcCHhHHhhCCEEEEE
Confidence 2 14577888998 78888988766 44555443211 0 0 00 222110 0000123568999999
Q ss_pred ecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 293 IYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 293 ~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
.|... . ... +.. ..++..+|+++++|.+......+ ...-..+ ......++...+. ...|
T Consensus 269 ~Y~g~---~---~~~-------l~~---~~~~~p~k~lw~TE~~~~~~~~~--~~~~g~w-~~~a~~ii~~~~~--~~~~ 327 (447)
T 2wnw_A 269 WYTGD---H---FSQ-------IQY---LAQCLPDKKLLFSEGCVPMESDA--GSQIRHW-HTYLHDMIGNFKS--GCSG 327 (447)
T ss_dssp CTTCC---C---HHH-------HHH---HHHHCTTSEEEEEECCCBCCCST--THHHHHH-HHHHHHHHHHHHT--TCCE
T ss_pred ccCCC---c---HHH-------HHH---HHHHCCCCeEEEeccccCCcccC--CCCCCcH-HHHHHHHHHHHhc--CCEE
Confidence 99743 1 000 111 11223699999999986432110 0111122 1222333444433 5889
Q ss_pred ceeeeecc
Q 014151 373 ALIWQLFV 380 (430)
Q Consensus 373 ~~~W~~~~ 380 (430)
+++|.+..
T Consensus 328 ~~~Wnl~l 335 (447)
T 2wnw_A 328 FIDWNLLL 335 (447)
T ss_dssp EEEEESEE
T ss_pred EEEhhhhh
Confidence 99999984
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0005 Score=70.86 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=130.2
Q ss_pred HHcCCCEEEEcccc-C---CCCC--ccc--cCCCCCCh--HHHHHHHHHHHHHHHc---CCEEEEeccCCcccCCCcchh
Q 014151 87 AKMGLTVCRTWAFN-D---GGYN--SLQ--ISPGQFDE--RVFKALDHVIVEARKN---GVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 87 ~~~G~n~vR~~~~~-~---g~~~--~~~--~~pg~~de--~~l~~lD~~l~~A~~~---Gi~vil~l~~~w~~~gg~~~y 153 (430)
..+|++.+|+.+-+ + ..|. ... +.-+.|+- +..+..-.++..|+++ +|+++... |..
T Consensus 112 ~Glglsi~R~~IG~~d~s~~~ysy~d~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~asp---WSp------- 181 (497)
T 2nt0_A 112 EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASP---WTS------- 181 (497)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEE---SCC-------
T ss_pred CCCceEEEEEeecCCCCCCCCccccCCCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEec---CCC-------
Confidence 55899999996532 1 0111 110 01133442 2212445678888876 68887654 532
Q ss_pred hhhhhhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC-----C----C
Q 014151 154 VNWAWEEGIGISSSNDSF--FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS-----D----P 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f--~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~-----~----~ 221 (430)
|.|....|...+. ..+ ..+++..+.|.+|+..+++. |+++- .|-+..+.|||.... . -
T Consensus 182 P~wMk~n~~~~gg--G~L~~~~~~~~y~~yA~Ylvk~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~ 251 (497)
T 2nt0_A 182 PTWLKTNGAVNGK--GSLKGQPGDIYHQTWARYFVKFLDA--------YAEHKLQFWAVTAENEPSAGLLSGYPFQCLGF 251 (497)
T ss_dssp CGGGBTTCSSSSS--CBBSSCTTSHHHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSSGGGGGSTTCCSSCCBC
T ss_pred cHHHhcCCCcCCC--CccCCccchhHHHHHHHHHHHHHHH--------HHHcCCCeeEEeeccCCCcccCCCCCCCCCCc
Confidence 4565443321100 111 11345888899999888888 77653 477889999997632 1 1
Q ss_pred ChHHHHHHHH-HHHHHHHhcCC-CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCC
Q 014151 222 SGDTLQDWID-EMSAFVKSIDK-KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF 299 (430)
Q Consensus 222 ~~~~~~~w~~-~~~~~Ir~~dp-~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~ 299 (430)
.++..++|++ .+..++++..- +.-|....+.... .| .|... -+...-+.+.+|.+++|.|.+.-.
T Consensus 252 t~~~~~~fik~~L~p~L~~~gl~~~kI~~~D~n~~~---------~~-~~~~~---~l~d~~a~~~v~~ia~H~Y~~~~~ 318 (497)
T 2nt0_A 252 TPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLL---------LP-HWAKV---VLTDPEAAKYVHGIAVHWYLDFLA 318 (497)
T ss_dssp CHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGG---------TT-HHHHH---HHTSHHHHTTCCEEEEEEETTSCC
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCc---------ch-hHHHH---HhcChhhHhhcceEEEEecCCCCC
Confidence 3577788988 68888888653 5556554432111 01 23211 000011346799999999975311
Q ss_pred CCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCccccee
Q 014151 300 HDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALI 375 (430)
Q Consensus 300 ~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~ 375 (430)
. .. . -+.. ..++..+|+++.+|.+..... .+...-.+...+. ..|...++. ...+++.
T Consensus 319 -~--~~---~----~l~~---~~~~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a---~~ii~~l~~--~~~~~~~ 380 (497)
T 2nt0_A 319 -P--AK---A----TLGE---THRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYS---HSIITNLLY--HVVGWTD 380 (497)
T ss_dssp -C--HH---H----HHHH---HHHHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHH---HHHHHHHHT--TEEEEEE
T ss_pred -C--hH---H----HHHH---HHHHCCCCcEEEecccCCCCCccCCCCcCcHHHHHHHH---HHHHHHHhh--cceeeEe
Confidence 1 00 0 0111 112236999999998764311 1111112222222 223334443 4889999
Q ss_pred eeeccC
Q 014151 376 WQLFVE 381 (430)
Q Consensus 376 W~~~~~ 381 (430)
|.+..+
T Consensus 381 Wnl~ld 386 (497)
T 2nt0_A 381 WNLALN 386 (497)
T ss_dssp EESEEC
T ss_pred eeeeec
Confidence 999743
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.7e-05 Score=81.81 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=72.5
Q ss_pred ccC-CCceeEEeecCCCCCCCCC---------ChHHHHHHHHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCc
Q 014151 200 YRN-DPTIFAWELINEPRCMSDP---------SGDTLQDWIDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNP 266 (430)
Q Consensus 200 yk~-~p~I~~wel~NEp~~~~~~---------~~~~~~~w~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np 266 (430)
|++ .+...-||++|||...... ..+.+.+|++.++++||+.+ |+..|. |... +-|..-.-|-
T Consensus 131 ~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVG-Gpas----A~p~~e~~nF 205 (591)
T 4aw7_A 131 YSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVI-GYAA----AYPAWEDGNF 205 (591)
T ss_dssp HHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEE-EEEE----SCCCTTTTTT
T ss_pred hccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEe-cccc----ccccccccch
Confidence 553 3456679999999943211 13477889999999999865 887763 2111 1111000011
Q ss_pred cchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchh--hhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC
Q 014151 267 EMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFE--DDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL 340 (430)
Q Consensus 267 ~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~--~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~ 340 (430)
..|... -..|.. .+...+||+|+|.|...|....... ...+-.-..|+.+....- ..-||++|+|+|....
T Consensus 206 ~~W~~~-~k~Fmd-~ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~Ys~~k~-G~vKP~~ISEYG~~~~ 278 (591)
T 4aw7_A 206 NYWNTR-MKMFID-RAGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEAYSYIKF-GHVKPLAISEFGGIDN 278 (591)
T ss_dssp HHHHHT-HHHHHH-HHGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHHHHHHHH-SSCCCEEEEEEEEECC
T ss_pred hhhhHH-HHHHHH-hcCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHHHHHHHh-CCCcceEEeccCCccC
Confidence 244321 123433 2456799999999986544322110 122333333444432222 2579999999997764
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00019 Score=72.86 Aligned_cols=58 Identities=21% Similarity=0.317 Sum_probs=45.2
Q ss_pred HHHHHHHHHhccCCcccccccCCC---ceeEEeecCCCCCC---------CCCChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 181 FKHYVKTVLTRKNTITGVEYRNDP---TIFAWELINEPRCM---------SDPSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 181 ~~~~~~~lv~R~n~~tg~~yk~~p---~I~~wel~NEp~~~---------~~~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
..++++.+++| |+... .|-.|+|+|||..- ...+.+.+.+...+.+++||++||+..|
T Consensus 152 ~~e~v~~l~~~--------~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl 221 (517)
T 3ik2_A 152 MDEFVNYLVNK--------YGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAET 221 (517)
T ss_dssp HHHHHHHHHHH--------HCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHh--------cCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 36788888888 88662 68999999999630 1124678888999999999999999544
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00031 Score=67.71 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=122.1
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+-- .+++..+++++.+ .+|+.|++.||++.- | ..++.+++..||+|++.
T Consensus 2 Gv~yg~---~~~nlp~~~~vv~---llk~~~i~~VRlY~~---------------d-------~~vL~A~~~tgi~v~lg 53 (306)
T 1aq0_A 2 GVCYGM---SANNLPAASTVVS---MFKSNGIKSMRLYAP---------------N-------QAALQAVGGTGINVVVG 53 (306)
T ss_dssp EEECCC---CCSSCCCHHHHHH---HHHHHTCCEEEESSC---------------C-------HHHHHHHTTSCCEEEEE
T ss_pred eEeccc---CCCCCCCHHHHHH---HHHhcCCCEEEEcCC---------------C-------HHHHHHHHhcCCEEEEe
Confidence 777432 2223345555554 567899999999531 1 25688889999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. .. ..- ..-.+...++++.-+.+ | ....|....++||.-..
T Consensus 54 v~n~-----~~---~~~------------------a~~~~~a~~wv~~nv~~--------y-~~~~I~~I~VGNEvl~g- 97 (306)
T 1aq0_A 54 APND-----VL---SNL------------------AASPAAAASWVKSNIQA--------Y-PKVSFRYVCVGNEVAGG- 97 (306)
T ss_dssp ECGG-----GH---HHH------------------HHCHHHHHHHHHHHTTT--------C-TTSEEEEEEEEESCCGG-
T ss_pred cccc-----hh---hHh------------------hhCHHHHHHHHHHhhcc--------C-CCccEEEEEecccccCC-
Confidence 7431 00 000 01133455667666666 7 44579999999999752
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCC-CEEEEccC-CccCCCCCCCcccCcc--chhhc------cCcchhhccCCCCcceE
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDKK-HLVTVGLE-GFYGPKSPKRLTVNPE--MWASA------LGSDFIRNSNNDNIDFA 289 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp~-~lV~~G~~-g~~~~~~~~~~~~np~--~w~~~------~g~df~~~~~~~~iD~~ 289 (430)
. ...+...++.+.+++++..-+ ..|++... +.+..+.| |+ .+... .-.+|. ....|++
T Consensus 98 ~--~~~L~~am~~v~~aL~~~gl~~IkVsT~~~~~v~~~s~p------PS~g~f~~~~~~~~~p~l~fL----~~~~~~~ 165 (306)
T 1aq0_A 98 A--TRNLVPAMKNVHGALVAAGLGHIKVTTSVSQAILGVFSP------PSAGSFTGEAAAFMGPVVQFL----ARTNAPL 165 (306)
T ss_dssp G--GGGHHHHHHHHHHHHHHTTCTTSEEEEEEEGGGEEECSS------GGGCEECHHHHHHHHHHHHHH----HHHTCCE
T ss_pred C--HHHHHHHHHHHHHHHHHCCCCceeEeccccccccccCCC------CcccccchhhHHHHHHHHHHH----HhcCCce
Confidence 2 567788888888889876543 45655321 11221111 21 00000 000111 1235677
Q ss_pred EeeecCCCCC----CC------------cc-hh-hh---HHHHHHHHHH---HHHhhhhcCCCcEEEEecCCCCCCC-CC
Q 014151 290 SVHIYPDHWF----HD------------LE-FE-DD---LKFVTKWMLS---HIEDGDKELNKPVFFTEYGLSNLIK-GF 344 (430)
Q Consensus 290 s~H~Y~~~w~----~~------------~~-~~-~~---~~~~~~~l~~---~~~~a~~~~gkPv~v~EfG~~~~~~-~~ 344 (430)
.+|.||.. . +. .. .+ .. ..++..-+.. .++.+. ..+|||+|+|.|++..+. +.
T Consensus 166 ~vN~yPyf-~~~~~p~~i~l~yalf~~~~~~v~d~~~~y~n~fda~~dav~~al~~~g-~~~~~ivVsEtGWPS~G~~~a 243 (306)
T 1aq0_A 166 MANIYPYL-AWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHG-GSSVKLVVSESGWPSGGGTAA 243 (306)
T ss_dssp EEECCHHH-HHHHCTTSSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTT-CTTCCEEEEECCCCSSSSTTC
T ss_pred eeecchHh-hhcCCCccCccchhhcCCCCccccCcchhhhhHHHHHHHHHHHHHHHhC-CCCCeEEEeeeecCcCCCCCC
Confidence 89988841 1 00 00 00 00 0112111221 111121 257999999999998763 34
Q ss_pred ChhHHHHHHHHHHHH
Q 014151 345 EPSLRDKLYKTILDI 359 (430)
Q Consensus 345 ~~~~r~~~~~~~~~~ 359 (430)
+.+.+..|++.+...
T Consensus 244 s~~na~~y~~~li~~ 258 (306)
T 1aq0_A 244 TPANARFYNQHLINH 258 (306)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 677777887766643
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=9.7e-05 Score=76.56 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=65.8
Q ss_pred HHHHHHHHHHcCCEEEEeccCC-c---ccCCCcchh-----hhhhhhh---CCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 014151 122 LDHVIVEARKNGVRLLLSLVNN-L---QAYGGKTQY-----VNWAWEE---GIGISSSNDSFFFDPSIHKYFKHYVKTVL 189 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~-w---~~~gg~~~y-----~~W~~~~---G~~~~~~~~~f~~d~~~~~~~~~~~~~lv 189 (430)
+|+++++|++.|...++++.=. | +..|+...+ ..|..-. +.+.... .+. .+. ......+++.+.
T Consensus 92 ~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~~~w~e~~n~~~~~~~~~-p~~-~~g--~~~~~~~~~~lr 167 (524)
T 2yih_A 92 VTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPSARWNQVVNAKNAPFQLQ-PDL-NDN--YVYVDEFVHFLV 167 (524)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEESCCCSCCCSS-CCS-SSS--EEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcccchhhhhccccCccccc-CCC-CCc--chhHHHHHHHHH
Confidence 8999999999999999987421 1 001222222 1233210 0000000 000 111 011245666666
Q ss_pred hccCCcccccccCC--C-ceeEEeecCCCCC-C--------CCCChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 190 TRKNTITGVEYRND--P-TIFAWELINEPRC-M--------SDPSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 190 ~R~n~~tg~~yk~~--p-~I~~wel~NEp~~-~--------~~~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
++ |+.. | .|-.|+|+|||.. . ...+.+.+.+...+.+++||.+||+.-|
T Consensus 168 ~~--------~G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l 228 (524)
T 2yih_A 168 NK--------YGTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEV 228 (524)
T ss_dssp HH--------HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HH--------cCCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 66 6543 3 4888999999974 0 1114577888899999999999999544
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0075 Score=61.88 Aligned_cols=120 Identities=18% Similarity=0.349 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHcCCEEEEeccCC-ccc----------------CCCcc-hhhhhhhhhCCCCCCCCCCCC-CCHH----
Q 014151 120 KALDHVIVEARKNGVRLLLSLVNN-LQA----------------YGGKT-QYVNWAWEEGIGISSSNDSFF-FDPS---- 176 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~~~-w~~----------------~gg~~-~y~~W~~~~G~~~~~~~~~f~-~d~~---- 176 (430)
...+.+++...++|.+-+++|--. |-. ||... .-+.|....|..+......+- .+|.
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~~~ 172 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTIGWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDANT 172 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSSEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGTEE
T ss_pred hHHHHHHHHHHhcCCceeEEEeccceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccccC
Confidence 457899999999999999987421 210 11111 012354222211101010010 1221
Q ss_pred --HHHHHHHHHHHHHhccCCcccccccCC--CceeEEeecCCCCCC--------CC-CChHHHHHHHHHHHHHHHhcCCC
Q 014151 177 --IHKYFKHYVKTVLTRKNTITGVEYRND--PTIFAWELINEPRCM--------SD-PSGDTLQDWIDEMSAFVKSIDKK 243 (430)
Q Consensus 177 --~~~~~~~~~~~lv~R~n~~tg~~yk~~--p~I~~wel~NEp~~~--------~~-~~~~~~~~w~~~~~~~Ir~~dp~ 243 (430)
-.....++++.+.++ |+.. -.|-.|+|.|||..- .. ...+.+.+-..+.+++||.+||+
T Consensus 173 ~~~~~y~~~~v~~l~~~--------~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~ 244 (535)
T 3ii1_A 173 LVDSTFQQGWAQHLVSQ--------WGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPS 244 (535)
T ss_dssp ECCHHHHHHHHHHHHHH--------HCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcHHHHHHHHHHHHHh--------cCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCC
Confidence 134456666666666 5432 258889999999531 11 13466777788999999999999
Q ss_pred CEEE
Q 014151 244 HLVT 247 (430)
Q Consensus 244 ~lV~ 247 (430)
..|.
T Consensus 245 i~l~ 248 (535)
T 3ii1_A 245 ALIV 248 (535)
T ss_dssp SEEE
T ss_pred cEEe
Confidence 6553
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0029 Score=67.09 Aligned_cols=223 Identities=12% Similarity=0.033 Sum_probs=117.7
Q ss_pred HHHHHHHHHH----HHcCCCEEEEccccCC-CCCccccCCCCCCh--HH-HHHHHHHHHHHHHcC--CEEEEeccCCccc
Q 014151 77 ARVGAMLQAG----AKMGLTVCRTWAFNDG-GYNSLQISPGQFDE--RV-FKALDHVIVEARKNG--VRLLLSLVNNLQA 146 (430)
Q Consensus 77 ~~~~~~~~~~----~~~G~n~vR~~~~~~g-~~~~~~~~pg~~de--~~-l~~lD~~l~~A~~~G--i~vil~l~~~w~~ 146 (430)
+.-++.|+.+ +.+|++.+|+.+-+.. +....+++.-.+.. +. ....-.++.+|++++ |+++... |..
T Consensus 49 ~~r~~il~~lFs~~~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~lk~A~~~~p~lki~asp---WSp 125 (656)
T 3zr5_A 49 PYRSEILDYLFKPNFGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKRNPDIILMGLP---WSF 125 (656)
T ss_dssp THHHHHHHHHHSTTTSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHHHHHHHHHCTTCEEEEEE---SCB
T ss_pred HHHHHHHHHHcCCCCCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHHHHHHHHhCCCcEEEEec---CCC
Confidence 3334444444 4679999999664321 11111222111111 10 112236677787775 5665543 542
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccc-cC-CCceeEEeecCCCCCCCCCChH
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY-RN-DPTIFAWELINEPRCMSDPSGD 224 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y-k~-~p~I~~wel~NEp~~~~~~~~~ 224 (430)
|.|....+ .+ .++..+.|.+|+...++. | +. .=.|-+..+.|||...
T Consensus 126 -------P~WMK~n~-~l---------~~~~y~~yA~Ylvk~i~~--------y~~~~GI~i~~Is~qNEP~~~------ 174 (656)
T 3zr5_A 126 -------PGWLGKGF-SW---------PYVNLQLTAYYVVRWILG--------AKHYHDLDIDYIGIWNERPFD------ 174 (656)
T ss_dssp -------CGGGGTTS-SC---------TTSSHHHHHHHHHHHHHH--------HHHHHCCCCCEECSCTTSCCC------
T ss_pred -------cHHhccCC-CC---------ChHHHHHHHHHHHHHHHH--------HHHhcCCceEEEeeccCCCcc------
Confidence 56775422 11 245666777777666665 4 22 2357778889999863
Q ss_pred HHHHHHHHHHHHHHhcCCC-CEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcc
Q 014151 225 TLQDWIDEMSAFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLE 303 (430)
Q Consensus 225 ~~~~w~~~~~~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~ 303 (430)
..|++.+..++++...+ .-|....+++ . .++.. -+...-+...+|.+++| |...-. .
T Consensus 175 --~~fik~L~p~L~~~gl~~~kI~~~D~n~-~------------~~~~~---il~d~~a~~~v~gia~H-Y~g~~~---~ 232 (656)
T 3zr5_A 175 --ANYIKELRKMLDYQGLQRVRIIASDNLW-E------------PISSS---LLLDQELWKVVDVIGAH-YPGTYT---V 232 (656)
T ss_dssp --HHHHHHHHHHHHHTTCTTCEEEEEEECS-T------------THHHH---HHHCHHHHHHCCEEEEE-SCTTCC---C
T ss_pred --ccHHHHHHHHHHHcCCCccEEEEcCCCc-h------------HHHHH---HhcCHhHHhhccEEEEE-CCCCCc---c
Confidence 36888999999998876 5565544321 1 01110 00000123568999999 654311 0
Q ss_pred hhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 304 FEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 304 ~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
. .+. ..+|+++.+|.+..... ......+-+.+...+. .+ ...++++|.+..+
T Consensus 233 -------------~---~~~-~p~k~lw~TE~~~~~~~----~~g~g~wa~~i~~~~~----~~-~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 233 -------------W---NAK-MSGKKLWSSEDFSTINS----NVGAGCWSRILNQNYI----NG-NMTSTIAWNLVAS 284 (656)
T ss_dssp -------------H---HHH-HHTCEEEEEEEECSCTT----HHHHHHHHHHHHHHHH----HH-CCCEEEEECSEEC
T ss_pred -------------h---Hhh-CCCCceEEEccccCCCC----CCCccHHHHHHHHHHH----hC-CceEEEEEeeeeC
Confidence 0 122 27999999998742211 1111122222222222 22 5789999999864
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00043 Score=69.40 Aligned_cols=230 Identities=13% Similarity=0.126 Sum_probs=118.7
Q ss_pred CHHHHHHHHHH-HHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQA-GAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~-~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
+++..++.|.. -..+|++.+|+.+-+. ...|. ....++.+|.+.||+++... |..
T Consensus 32 ~~~~r~~lF~~~~~g~g~s~~R~~ig~~---------~~~~~-----~~~~~~k~A~~~~~~i~asp---Wsp------- 87 (401)
T 3kl0_A 32 TAAQRETAFGNGQNQLGFSILRIHVDEN---------RNNWY-----KEVETAKSAVKHGAIVFASP---WNP------- 87 (401)
T ss_dssp CHHHHHHHHCCSTTCCCCCEEEEEECSS---------GGGGG-----GGHHHHHHHHHTTCEEEEEE---SCC-------
T ss_pred CHHHHHHhcCCCCCCCceEEEEEEeCCC---------cccch-----hHHHHHHHHHhCCCEEEEec---CCC-------
Confidence 45555666654 3468999999955321 01222 22467888999999988765 532
Q ss_pred hhhhhhhCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCCCChHHHHHH-H
Q 014151 154 VNWAWEEGIGIS-SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSDPSGDTLQDW-I 230 (430)
Q Consensus 154 ~~W~~~~G~~~~-~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~~~~~~~~~w-~ 230 (430)
|.|....+...+ .... .-.++..+.|.+|+...++. |+++- .|-+..+.|||....... .| .
T Consensus 88 P~WMk~~~~~~g~~~~g--~L~~~~y~~yA~Y~~k~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~-----~~t~ 152 (401)
T 3kl0_A 88 PSDMVETFNRNGDTSAK--RLKYNKYAAYAQHLNDFVTF--------MKNNGVNLYAISVQNEPDYAHEWT-----WWTP 152 (401)
T ss_dssp CGGGEEEEEETTEEEEE--EECGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTSCTTSC-----CCCH
T ss_pred CHHhccCCCcCCCccCC--cCChHHHHHHHHHHHHHHHH--------HHHCCCCeEEEeeecccCCCCCCC-----CCCH
Confidence 456542110000 0000 11356778888888888888 77654 577778899998642110 01 1
Q ss_pred HHHHHHHHh-cCCC-CEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhH
Q 014151 231 DEMSAFVKS-IDKK-HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL 308 (430)
Q Consensus 231 ~~~~~~Ir~-~dp~-~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~ 308 (430)
++++++||. +.|- .-|..+. .. .. .+ .|... -+....+.+.+|.+++|.|...... ...
T Consensus 153 ~~~~~fi~~~lg~~~tkI~~~d-~~-~~--------~~-~~~~~---il~D~~a~~~v~gia~H~Y~~~~~~-l~~---- 213 (401)
T 3kl0_A 153 QEILRFMRENAGSINARVIAPE-SF-QY--------LK-NLSDP---ILNDPQALANMDILGTHLYGTQVSQ-FPY---- 213 (401)
T ss_dssp HHHHHHHHHTGGGCSSEEEEEE-ES-SC--------CH-HHHHH---HHTCHHHHHTCSEEEEECTTCCGGG-SCC----
T ss_pred HHHHHHHHHhccccCceEEecc-hh-hh--------hh-hhhHH---HhcCHhHHhhCcEEEEEcCCCCccc-ccc----
Confidence 455566653 3342 3344432 21 00 01 12210 0000012467899999999754210 000
Q ss_pred HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC----CCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 309 KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI----KGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 309 ~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
. .+ .++ ..+|+++.+|.+..... ..+... ..+-+.+.. .+..+ ...++++|.+.
T Consensus 214 ~--------~~-~~~-~~~K~lw~TE~~~~~~~~~~~~~w~~a--l~~a~~I~~----~l~~~-~~~a~v~Wnl~ 271 (401)
T 3kl0_A 214 P--------LF-KQK-GAGKDLWMTEVYYPNSDTNSADRWPEA--LDVSQHIHN----AMVEG-DFQAYVWWYIR 271 (401)
T ss_dssp H--------HH-HHH-CTTCEEEEEEECCSCCCTTCTTCTTTT--HHHHHHHHH----HHHTS-CCSEEEEEESB
T ss_pred h--------hH-Hhh-CCCCeEEEEecccCCCCCccccchhHH--HHHHHHHHH----HHHhc-cCcEEEEcccc
Confidence 0 00 112 37999999998754321 112111 222232322 22222 36789999983
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0098 Score=57.31 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=80.0
Q ss_pred EeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 59 NGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 59 ~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+|+-- .+++.+++.++.+ .+|+.|++.||++.- |+ .++.+++..||+|++
T Consensus 2 iGvnyG~---~~~nlp~p~~vv~---llks~gi~~VRlYda---------------D~-------~vL~Al~~sgi~v~v 53 (316)
T 3em5_A 2 VGVCYGM---QGNNLPPVSEVIA---LYKKSNITRMRIYDP---------------NQ-------AVLEALRGSNIELIL 53 (316)
T ss_dssp CEEECCC---CCTTCCCHHHHHH---HHHHTTCCEEECSSC---------------CH-------HHHHHHTTCCCEEEE
T ss_pred eeEEcCc---CCCCCCCHHHHHH---HHHHcCCCEEEEecC---------------CH-------HHHHHhhcCCceEEE
Confidence 3777432 2223335555554 457899999998431 22 478999999999999
Q ss_pred eccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC
Q 014151 139 SLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM 218 (430)
Q Consensus 139 ~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~ 218 (430)
.+.+. + . .. ..++ ....++++.-+.. |.....|....++||.-..
T Consensus 54 GV~n~--~---l---~~----------------la~~---~~A~~WV~~nV~~--------y~p~~~I~~IaVGNEvl~~ 98 (316)
T 3em5_A 54 GVPNS--D---L---QS----------------LTNP---SNAKSWVQKNVRG--------FWSSVRFRYIAVGNEISPV 98 (316)
T ss_dssp EECGG--G---H---HH----------------HTSH---HHHHHHHHHHTGG--------GTTTSCEEEEEEEESCCTT
T ss_pred ecccc--h---h---hh----------------ccCH---HHHHHHHHHhhhh--------cCCCceEEEEEEecccccC
Confidence 88541 0 0 00 1121 2234556655555 6555679999999998765
Q ss_pred CCCC---hHHHHHHHHHHHHHHHhcCC--CCEEEEc
Q 014151 219 SDPS---GDTLQDWIDEMSAFVKSIDK--KHLVTVG 249 (430)
Q Consensus 219 ~~~~---~~~~~~w~~~~~~~Ir~~dp--~~lV~~G 249 (430)
.... ...+..-++.+..++++..= ...|++.
T Consensus 99 ~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~ 134 (316)
T 3em5_A 99 NRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTA 134 (316)
T ss_dssp CTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEE
T ss_pred CCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEec
Confidence 4322 45667778888888887653 3566654
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.013 Score=55.66 Aligned_cols=125 Identities=12% Similarity=0.175 Sum_probs=70.9
Q ss_pred EeecCCCCCC--C---C-----CChHHHHHHHHHHHHHHHhcCCCCEEEEcc-CC-ccCCCCCCCcccCccchhhccCcc
Q 014151 209 WELINEPRCM--S---D-----PSGDTLQDWIDEMSAFVKSIDKKHLVTVGL-EG-FYGPKSPKRLTVNPEMWASALGSD 276 (430)
Q Consensus 209 wel~NEp~~~--~---~-----~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~-~g-~~~~~~~~~~~~np~~w~~~~g~d 276 (430)
|-+..|.+.. . . .+++.+++..+.+...+|+...+.++.+=+ .. ..+. .......-|
T Consensus 104 ~R~~hE~nG~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~-~~~~~~~YP---------- 172 (283)
T 2v3g_A 104 LRPLHEANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGN-GTSYLGHYP---------- 172 (283)
T ss_dssp EEESCCTTSSSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCST-TCCSSTTCC----------
T ss_pred EEeccccCCCcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCC-ccchhhhCC----------
Confidence 8888888753 1 1 146788888899999999875455554311 00 0000 000011111
Q ss_pred hhhccCCCCcceEEeeecCCC----CCCC-cchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHH
Q 014151 277 FIRNSNNDNIDFASVHIYPDH----WFHD-LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDK 351 (430)
Q Consensus 277 f~~~~~~~~iD~~s~H~Y~~~----w~~~-~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~ 351 (430)
.+..+|++++-.|... |.+. ..+ .+.+....+.++. .+||++|+|+|....+ ..+.+
T Consensus 173 -----GDdyVDivG~D~Y~~~~~~~~~~~~~~f-------~~~~~~~~~~~~~-~~Kpi~i~E~G~~~~g-----gdk~~ 234 (283)
T 2v3g_A 173 -----GDNYVDYTSIDGYNWGTTQSWGSQWQSF-------DQVFSRAYQALAS-INKPIIIAEFASAEIG-----GNKAR 234 (283)
T ss_dssp -----CGGGCSBEEEEEEECTTCCTTTCCCCCH-------HHHHHHHHHHHTT-SSSCEEEEEEEECSTT-----SCHHH
T ss_pred -----CCCEEEEEEEEccCCCCcccccchhHhH-------HHHHHHHHHHHHh-CCCcEEEEeecCCCCC-----CchHH
Confidence 1246899998888531 2111 111 1222333344454 8999999999987543 13678
Q ss_pred HHHHHHHHHHH
Q 014151 352 LYKTILDIVYK 362 (430)
Q Consensus 352 ~~~~~~~~~~~ 362 (430)
|++.+++.+.+
T Consensus 235 W~~~~~~~~~~ 245 (283)
T 2v3g_A 235 WITEAYNSIRT 245 (283)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888776543
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0019 Score=66.76 Aligned_cols=117 Identities=21% Similarity=0.298 Sum_probs=65.4
Q ss_pred CChHHHHHHHHHHHHHHHcCC-EEEEeccCC-c-c--cCCCcchh-----hhhhhh---hCCCCCCCCCCCCCCHH---H
Q 014151 114 FDERVFKALDHVIVEARKNGV-RLLLSLVNN-L-Q--AYGGKTQY-----VNWAWE---EGIGISSSNDSFFFDPS---I 177 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi-~vil~l~~~-w-~--~~gg~~~y-----~~W~~~---~G~~~~~~~~~f~~d~~---~ 177 (430)
+++... .+|+++++|++.|. ..|+++.-. | . .-+....| ..|... .|.+ +-.+|. -
T Consensus 83 ~~~~~~-~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~~~~w~~~~~~~~~~-------~~~~p~~~~g 154 (519)
T 2e4t_A 83 WSTPAS-VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAPSSRWKEVKFEKGAP-------FSLTPDTEDD 154 (519)
T ss_dssp TTSTTH-HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSSSTTEEEEESCCCSC-------CCSSCCTTSS
T ss_pred ccCcch-hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCCcccccccccccCCc-------cccCCCCCCC
Confidence 444444 79999999999998 888876420 1 0 00000011 112110 0111 000110 0
Q ss_pred HHHHHHHHHHHHhccCCcccccccCC--C-ceeEEeecCCCCC----C-----CCCChHHHHHHHHHHHHHHHhcCCCCE
Q 014151 178 HKYFKHYVKTVLTRKNTITGVEYRND--P-TIFAWELINEPRC----M-----SDPSGDTLQDWIDEMSAFVKSIDKKHL 245 (430)
Q Consensus 178 ~~~~~~~~~~lv~R~n~~tg~~yk~~--p-~I~~wel~NEp~~----~-----~~~~~~~~~~w~~~~~~~Ir~~dp~~l 245 (430)
-..+.++++.+..+ ++.. | .|-.|+|+|||.. . ...+.+.+.+.+.+.++++|.+||+..
T Consensus 155 ~~~~~ewv~yl~~~--------nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~ 226 (519)
T 2e4t_A 155 YVYMDEFVNYLVNK--------YGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAE 226 (519)
T ss_dssp EEEHHHHHHHHHHH--------HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred hHHHHHHHHHHHHh--------cCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcE
Confidence 01235566666655 5543 3 4888999999942 0 111356778888999999999999954
Q ss_pred E
Q 014151 246 V 246 (430)
Q Consensus 246 V 246 (430)
+
T Consensus 227 l 227 (519)
T 2e4t_A 227 I 227 (519)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0047 Score=61.92 Aligned_cols=76 Identities=18% Similarity=0.389 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEE--EEeccCCcccCCCc-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRL--LLSLVNNLQAYGGK- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~v--il~l~~~w~~~gg~- 150 (430)
+...++..|+.+|++|+.-|-+-++ |-.+|.+ |++|| |..++++++.+++.|||+ |+++|. .||.
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mv~~~GLKlq~vmSFHq----CGgNV 100 (498)
T 1fa2_A 32 DKEKVEDELKQVKAGGCDGVMVDVW----WGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSFHQ----CGGNV 100 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 5789999999999999999998554 4445654 89999 888999999999999999 556663 3432
Q ss_pred -----chhhhhhhhhC
Q 014151 151 -----TQYVNWAWEEG 161 (430)
Q Consensus 151 -----~~y~~W~~~~G 161 (430)
=..|.|+...|
T Consensus 101 GD~~~IPLP~WV~~~~ 116 (498)
T 1fa2_A 101 GDAVFIPIPQWILQIG 116 (498)
T ss_dssp TCCCCBCSCHHHHHHT
T ss_pred CCcccccCCHHHHHhh
Confidence 12477887644
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.13 Score=53.79 Aligned_cols=149 Identities=21% Similarity=0.336 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+..-+.+.|+.++++|+|+|=+-...+. +|.. ..+.| .|. ..+.|.++|++|+++||+||+++.-+ ..
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp-~~G--t~~df~~lv~~~H~~Gi~VilD~V~N--H~ 244 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDP-QFG--DKDTLKKLVDLCHERGIRVLLDAVFN--HS 244 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCT-TTC--CHHHHHHHHHHHTTTTCEEEEECCCS--BC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCc-ccC--CHHHHHHHHHHHHHCCCEEEEEEccc--cC
Confidence 5566777799999999999998443221 1111 01111 121 25789999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCC-----CCCC---------CC-CCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGIS-----SSND---------SF-FFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~-----~~~~---------~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+. ...|..|..-.+.+.. ..-. ++ +.+|++++.+.+.++..++.
T Consensus 245 ~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~-------- 316 (583)
T 1ea9_C 245 GRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRE-------- 316 (583)
T ss_dssp CTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHH--------
T ss_pred CCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHh--------
Confidence 11 1123333321110100 0000 11 55789999999999988865
Q ss_pred ccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+=+ =+=.++.|+.. ..+++++.+.+++.+|+.+ ++|
T Consensus 317 ~gvD--GfR~D~~~~~~----------~~f~~~~~~~v~~~~p~~~-~ig 353 (583)
T 1ea9_C 317 TGID--GWRLDVANEVS----------HQFWREFRRVVKQANPDAY-ILG 353 (583)
T ss_dssp HCCS--EEEETTCTTSC----------HHHHHHHHHHHHHHCTTCE-EEE
T ss_pred cCce--EEEecccccCC----------HHHHHHHHHHHHhhCCCeE-EEE
Confidence 4222 11134455432 3577888888999999855 455
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0045 Score=62.09 Aligned_cols=74 Identities=16% Similarity=0.374 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEE--EEeccCCcccCCCc-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRL--LLSLVNNLQAYGGK- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~v--il~l~~~w~~~gg~- 150 (430)
+...++..|+.+|++|+.-|-+-++ |-.+|. .|++|| |..++++++.+++.|||+ |+++|. .||.
T Consensus 31 ~~~~l~~~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~l~~mv~~~GLKlq~vmSFHq----CGgNV 99 (495)
T 1wdp_A 31 DPDGLKEQLLQLRAAGVDGVMVDVW----WGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSFHQ----CGGNV 99 (495)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCST
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 5788999999999999999998554 444565 489999 888999999999999999 556663 3432
Q ss_pred -----chhhhhhhh
Q 014151 151 -----TQYVNWAWE 159 (430)
Q Consensus 151 -----~~y~~W~~~ 159 (430)
=..|.|+..
T Consensus 100 GD~~~IPLP~WV~~ 113 (495)
T 1wdp_A 100 GDIVNIPIPQWVLD 113 (495)
T ss_dssp TCSCCBCSCHHHHH
T ss_pred CCcccccCCHHHHH
Confidence 124678765
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.057 Score=54.51 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC-CC-------CccccCC-CCCCh--HHHHHHHHHHHHHHHcCCEEEEeccCC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG-GY-------NSLQISP-GQFDE--RVFKALDHVIVEARKNGVRLLLSLVNN 143 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g-~~-------~~~~~~p-g~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~~ 143 (430)
+...+.+.|+.++++|+|+|=+-...+. .. ...++.. -..++ -..+.|.+++++|+++||+||+++.-+
T Consensus 28 ~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 28 NFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 5677888899999999999998443210 00 0011100 00111 135788999999999999999997532
Q ss_pred cccCCCc----chhhhhhhhh--CCCCCCCCCC-------CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEe
Q 014151 144 LQAYGGK----TQYVNWAWEE--GIGISSSNDS-------FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWE 210 (430)
Q Consensus 144 w~~~gg~----~~y~~W~~~~--G~~~~~~~~~-------f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~we 210 (430)
..++. ..++.|.... |. ....... =+.+|++++.+.+.++..++. +.|.++-
T Consensus 108 --H~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~---vDGfRlD--------- 172 (449)
T 3dhu_A 108 --HTSPDSVLATEHPEWFYHDADGQ-LTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF---VDGYRCD--------- 172 (449)
T ss_dssp --EECTTSHHHHHCGGGBCBCTTSC-BCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT---CSEEEET---------
T ss_pred --cCcCccchhhcCccceEECCCCC-cCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh---CCEEEEE---------
Confidence 12211 1344554321 11 0000011 146788888888888777654 5554441
Q ss_pred ecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 211 LINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 211 l~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
...+. ...+++++.+.+|+..|+..+.
T Consensus 173 aa~~~----------~~~f~~~~~~~~~~~~p~~~~~ 199 (449)
T 3dhu_A 173 VAPLV----------PLDFWLEARKQVNAKYPETLWL 199 (449)
T ss_dssp TGGGS----------CHHHHHHHHHHHHHHSTTCEEE
T ss_pred ChhhC----------CHHHHHHHHHHHHhhCCCeEEE
Confidence 11111 1356677888889999987643
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=95.98 E-value=0.11 Score=54.40 Aligned_cols=146 Identities=23% Similarity=0.414 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+..-+.+.|+.++++|+|+|=+-...+. +|.. ..+.| .|. ..+.|+++|++|+++||+||+++.-+ ..
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~-~~G--t~~dfk~lv~~~H~~Gi~VilD~V~N--H~ 245 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDP-QFG--DLPTFRRLVDEAHRRGIKIILDAVFN--HA 245 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TTC--CHHHHHHHHHHHHTTTCEEEEEECCS--BC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCc-ccC--CHHHHHHHHHHHHHCCCEEEEEEcCC--cC
Confidence 4556677799999999999998443221 1111 01112 121 25789999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCC----C----------CCCCC-CCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGIS----S----------SNDSF-FFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~----~----------~~~~f-~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+. ...|..|..-.+.+.. . ...++ +.+|++++.+.+.++..+ .
T Consensus 246 ~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~-------- 316 (585)
T 1wzl_A 246 GDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-E-------- 316 (585)
T ss_dssp CTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-H--------
T ss_pred CCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-h--------
Confidence 11 1123344321111100 0 00111 457889999999888877 4
Q ss_pred ccCCCceeEE--eecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 200 YRNDPTIFAW--ELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 200 yk~~p~I~~w--el~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+ |-+| ++.|+.. ..+++++.+.+++.+|+.+ ++|
T Consensus 317 ~g----vDGfR~D~a~~~~----------~~f~~~~~~~v~~~~p~~~-~ig 353 (585)
T 1wzl_A 317 QG----IDGWRLDVANEVD----------HAFWREFRRLVKSLNPDAL-IVG 353 (585)
T ss_dssp TT----CCEEEETTGGGSC----------HHHHHHHHHHHHHHCTTCE-EEE
T ss_pred CC----CeEEEEeccccCC----------HHHHHHHHHHHHHHCCCEE-EEE
Confidence 32 2233 4455432 3577888888999999865 455
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.1 Score=54.68 Aligned_cols=149 Identities=17% Similarity=0.300 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+..-+.+.|+.++++|+|+|=+-...+. +|.. ..+.| .|. ..+.|.++|++|+++||+||+++.-+ ..
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp-~~G--t~~df~~lv~~~H~~Gi~VilD~V~N--H~ 248 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDP-HFG--DKETLKTLIDRCHEKGIRVMLDAVFN--HC 248 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TTC--CHHHHHHHHHHHHHTTCEEEEEECCS--BC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCc-cCC--CHHHHHHHHHHHHHCCCEEEEEECcC--cC
Confidence 4566777799999999999998443221 1111 11122 111 25788999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCCC-------------CCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGISS-------------SNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~~-------------~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
+. ...|..|..-.+.+... ...+ =+.+|++++.+.+.++..++. |
T Consensus 249 ~~~~~~f~~~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~--------~ 320 (588)
T 1j0h_A 249 GYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIRE--------F 320 (588)
T ss_dssp CTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHH--------H
T ss_pred cccchhHHHHHhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHh--------c
Confidence 11 12344443221111100 0001 146789999999988888865 4
Q ss_pred cCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 201 k~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
+=+ =+=.++.++.. ..+++++.+.+|+..|+.+ ++|
T Consensus 321 giD--GfR~D~a~~~~----------~~f~~~~~~~v~~~~p~~~-~ig 356 (588)
T 1j0h_A 321 DID--GWRLDVANEID----------HEFWREFRQEVKALKPDVY-ILG 356 (588)
T ss_dssp CCC--EEEETTGGGSC----------HHHHHHHHHHHHHHCTTCE-EEE
T ss_pred CCc--EEEEeccccCC----------HHHHHHHHHHHHHhCCCeE-EEE
Confidence 221 11134455421 3567888888999999855 445
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.005 Score=62.12 Aligned_cols=74 Identities=18% Similarity=0.374 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEE--EEeccCCcccCCCc-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRL--LLSLVNNLQAYGGK- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~v--il~l~~~w~~~gg~- 150 (430)
+...++..|+.+|++|+.-|.+-++ |-.+|. .|++|| |..++++++.+++.|||+ |+++|. .||.
T Consensus 29 ~~~~l~a~L~~LK~~GVdGVmvDVW----WGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlq~vmSFHq----CGgNV 97 (535)
T 2xfr_A 29 KGDELRAQLRKLVEAGVDGVMVDVW----WGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIMSFHQ----CGGNV 97 (535)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSC----BCCST
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeE----eeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeee----cCCCC
Confidence 5788999999999999999998554 444554 689999 888999999999999999 556663 3432
Q ss_pred -----chhhhhhhh
Q 014151 151 -----TQYVNWAWE 159 (430)
Q Consensus 151 -----~~y~~W~~~ 159 (430)
=..|.|+..
T Consensus 98 GD~~~IPLP~WV~e 111 (535)
T 2xfr_A 98 GDAVNIPIPQWVRD 111 (535)
T ss_dssp TCSCCBCSCHHHHH
T ss_pred CCcccccCCHHHHH
Confidence 124678765
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.099 Score=50.72 Aligned_cols=140 Identities=11% Similarity=0.117 Sum_probs=75.3
Q ss_pred EEeecCCCCCCC-CCChHHHHHHHHHHHHHHHhcC--CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCC
Q 014151 208 AWELINEPRCMS-DPSGDTLQDWIDEMSAFVKSID--KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNND 284 (430)
Q Consensus 208 ~wel~NEp~~~~-~~~~~~~~~w~~~~~~~Ir~~d--p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~ 284 (430)
.|-..-|.+..- ..+++.+++..+.+...+|+.. +|.+..-...+....+.......-| .+.
T Consensus 110 ~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~~~~~~~~YP---------------GDd 174 (333)
T 2ddx_A 110 YLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWP---------------GSE 174 (333)
T ss_dssp EEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSCSSCCGGGCC---------------CGG
T ss_pred EEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCCCCchhhcCC---------------CCC
Confidence 478888877431 1356788888899999999974 5533332211100000000001111 135
Q ss_pred CcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC-----------CCCCC------hh
Q 014151 285 NIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL-----------IKGFE------PS 347 (430)
Q Consensus 285 ~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~-----------~~~~~------~~ 347 (430)
.+|++++-.|... ..+.. .+....+.++. .+||+.|+|+|.... ..|-. ..
T Consensus 175 yVDivG~D~Y~~~---~~~~~--------~~~~~~~~a~~-~~KPi~i~E~G~~~~~~~~l~~~~~~~~G~n~~~k~~~~ 242 (333)
T 2ddx_A 175 YVDWVGLSYFAPQ---DCNWD--------RVNEAAQFARS-KGKPLFLNESTPQRYQVADLTYSADPAKGTNRQSKTSQQ 242 (333)
T ss_dssp GCSEEEEEESSGG---GGTTH--------HHHHHHHHHHH-HTCCEEEEEECCTTEETTTTEECSCTTTCCSCEECCHHH
T ss_pred EEEEEEEeccCCC---CcCHH--------HHHHHHHHHhc-CCCcEEEeccCCcccccccccccccccCCccccccccch
Confidence 7899999999642 11111 12233333443 899999999997640 01100 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCc-ccceeeee
Q 014151 348 LRDKLYKTILDIVYKSAKRKRSG-AGALIWQL 378 (430)
Q Consensus 348 ~r~~~~~~~~~~~~~~~~~~~~~-~G~~~W~~ 378 (430)
.+..|++.+++.+.+ .+.+ .+..++..
T Consensus 243 ~w~~W~~~~~~~l~~----~p~v~k~~~wfn~ 270 (333)
T 2ddx_A 243 LWDEWFAPYFQFMSD----NSDIVKGFTYINA 270 (333)
T ss_dssp HHHHTHHHHHHHHHH----TTTTEEEEEEECS
T ss_pred hHHHHHHHHHHHHHh----CcchheeEEEeec
Confidence 337888888876543 3345 35554443
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.22 Score=50.52 Aligned_cols=149 Identities=20% Similarity=0.278 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+-.-+.+.|+.++++|+|+|=+-...+. +|.. ....| .| -..+.|++++++|+++||+||+++.-+ ..
T Consensus 48 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp-~~--Gt~~df~~lv~~~h~~Gi~VilD~V~N--H~ 122 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDP-IL--GGNEALRHLLEVAHAHGVRVILDGVFN--HT 122 (475)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECG-GG--TCHHHHHHHHHHHHHTTCEEEEEECCS--BC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEecc--cc
Confidence 5667888899999999999998432211 1110 01111 11 126789999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCC-----C---------C-CCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGIS-----S---------S-NDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~-----~---------~-~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+. ...|..|..-.+.+.. . . ..-=+.+|++++.+.+.++..++. .+.|.+
T Consensus 123 ~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~~~--gvDGfR 200 (475)
T 2z1k_A 123 GRGFFAFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWIRF--GVDGWR 200 (475)
T ss_dssp CTTSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHH--TCCEEE
T ss_pred cCCCHHHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHHHC--CCCEEe
Confidence 10 1124444421110100 0 0 011256789999999999888843 112211
Q ss_pred ccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
.+..++... + .+++++.+.+|+..|+.. ++|
T Consensus 201 ---------~D~~~~~~~------~---~~~~~~~~~~~~~~p~~~-~ig 231 (475)
T 2z1k_A 201 ---------LDVPNEIPD------P---TFWREFRQRVKGANPEAY-IVG 231 (475)
T ss_dssp ---------ESSGGGCCC------H---HHHHHHHHHHHHHCTTCE-EEE
T ss_pred ---------ecccccCCH------H---HHHHHHHHHHhhcCCCcE-EEE
Confidence 244443321 1 366777888888888754 445
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.19 Score=51.14 Aligned_cols=160 Identities=12% Similarity=0.171 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHH--------HHcCCCEEEEccccC-CCCCccccCC-CCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAG--------AKMGLTVCRTWAFND-GGYNSLQISP-GQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~--------~~~G~n~vR~~~~~~-g~~~~~~~~p-g~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+-.-+.+.|+.+ +++|+|+|-+-.+.. ..+....+.. -..|+ -..+.|++++++|+++||+||+++.
T Consensus 24 Gdl~gi~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCHHHHHHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3567778889999 999999999843221 1110000000 00111 1368899999999999999999975
Q ss_pred CCcccCCC------------cchhhhhhhhhCCC--C------C-----------------CCCCC-CCCCHHHHHHHHH
Q 014151 142 NNLQAYGG------------KTQYVNWAWEEGIG--I------S-----------------SSNDS-FFFDPSIHKYFKH 183 (430)
Q Consensus 142 ~~w~~~gg------------~~~y~~W~~~~G~~--~------~-----------------~~~~~-f~~d~~~~~~~~~ 183 (430)
-+ +.+. ...|..|..-.+.. . + ....+ =+.+|++++.+.+
T Consensus 104 ~N--H~s~~~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~~~pdln~~np~Vr~~i~~ 181 (488)
T 1wza_A 104 IN--HTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIG 181 (488)
T ss_dssp CS--BCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHHHH
T ss_pred cc--cccCccHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCCCCcccccCCHHHHHHHHH
Confidence 32 1111 01133332110000 0 0 00011 1567899999999
Q ss_pred HHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 184 YVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 184 ~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
.++..+++ .+.|.++ +..+...... ..+....+++++.+.+|+..| .+++|.
T Consensus 182 ~~~~Wl~~--gvDGfR~---------Da~~~i~~~~--~~~~~~~~~~~~~~~~~~~~p--~~~vgE 233 (488)
T 1wza_A 182 IAKYWLKQ--GVDGFRL---------DGAMHIFPPA--QYDKNFTWWEKFRQEIEEVKP--VYLVGE 233 (488)
T ss_dssp HHHHHHHT--TCCEEEE---------ECCCTTSCGG--GTTHHHHHHHHHHHHHTTTSC--CEEEEE
T ss_pred HHHHHHHc--CCCChhH---------hhHhhhcccc--CcchHHHHHHHHHHHHhhcCC--CEEEEE
Confidence 88888776 4444433 3333211100 112345788899999999998 666764
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.35 Score=51.87 Aligned_cols=171 Identities=12% Similarity=0.176 Sum_probs=85.7
Q ss_pred CHHHHHHHH-HHHHHcCCCEEEEccccCC----C--CCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARVGAML-QAGAKMGLTVCRTWAFNDG----G--YNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~~~~~-~~~~~~G~n~vR~~~~~~g----~--~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+...+.+.+ +.++++|+|+|-+-...+. . |... .+.| .|. ..+.|.++|++|+++||+||+++.-+
T Consensus 261 ~~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~-~yG--t~~dfk~lV~~~H~~GI~VilD~V~NH 337 (722)
T 3k1d_A 261 SYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTS-RFG--TPDDFRALVDALHQAGIGVIVDWVPAH 337 (722)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECG-GGC--CHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccc-cCC--CHHHHHHHHHHHHHcCCEEEEEEEeec
Confidence 345555555 9999999999998443210 1 1110 1111 111 25788999999999999999997532
Q ss_pred -----cc--cCCCcchhhhhhhhhCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCC-
Q 014151 144 -----LQ--AYGGKTQYVNWAWEEGIGISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE- 214 (430)
Q Consensus 144 -----w~--~~gg~~~y~~W~~~~G~~~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NE- 214 (430)
|. .+.|.+.|..--...|....-.... =+.+|++++.+.+.++..+++ =-+.|.++-.-..++-.+..-+
T Consensus 338 ~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~-~gvDGfR~Dav~~mly~d~~r~~ 416 (722)
T 3k1d_A 338 FPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQE-FHIDGLRVDAVASMLYLDYSRPE 416 (722)
T ss_dssp CCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHH-SCCCEEEECCTHHHHBCCCCCCS
T ss_pred cCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHH-hCCCEEEEcchhhhhhccccccc
Confidence 10 1111111100000000000000011 156799999999999998886 0122222211011110011001
Q ss_pred ----CCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 215 ----PRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 215 ----p~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+............+++++.+.|++..|+.+ ++|.
T Consensus 417 g~w~~n~~gg~~n~~~~~fl~~l~~~v~~~~P~~~-~iaE 455 (722)
T 3k1d_A 417 GGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIV-TIAE 455 (722)
T ss_dssp SCCSCCCSSCSBCHHHHHHHHHHHHHHHHHSTTCE-EEEC
T ss_pred cccccccCCCccChHHHHHHHHHHHHHHHhCCCeE-EEEE
Confidence 1111111112345788999999999999865 4454
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.28 Score=51.60 Aligned_cols=171 Identities=13% Similarity=0.157 Sum_probs=84.2
Q ss_pred CHHHHHHH-HHHHHHcCCCEEEEccccCC------CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARVGAM-LQAGAKMGLTVCRTWAFNDG------GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~~~~-~~~~~~~G~n~vR~~~~~~g------~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+...+.+. ++.++++|+|+|-+-...+. +|... .+.| .| ...+.|.++|++|+++||+||+++.-+
T Consensus 153 ~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~-~~--Gt~~~~~~lv~~~H~~Gi~VilD~V~NH 229 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTR-RF--GTRDDFRYFIDAAHAAGLNVILDWVPGH 229 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECG-GG--SCHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCc-cC--CCHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 44455555 59999999999998432210 11110 1111 11 126789999999999999999987532
Q ss_pred -------cccCCCcchhhhhhhhhCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCC-
Q 014151 144 -------LQAYGGKTQYVNWAWEEGIGIS-SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE- 214 (430)
Q Consensus 144 -------w~~~gg~~~y~~W~~~~G~~~~-~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NE- 214 (430)
|..+.|.+.|..+-...|.... ....-=+.+|++++.+.+.++..+++. -+-|.++-.-..++.-+-.-+
T Consensus 230 ~~~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~-gvDGfR~D~~~~~~~~d~~~~~ 308 (617)
T 1m7x_A 230 FPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERF-GIDALRVDAVASMIYRDYSRKE 308 (617)
T ss_dssp CCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHS-CCCEEEECCSHHHHCC------
T ss_pred ccCccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHh-CcCEEEEcchhhhhhccccccc
Confidence 1111111111000000000000 000011567899999999999988860 122222211011110000000
Q ss_pred ----CCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 215 ----PRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 215 ----p~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+............+++++.+.||+..|+.+ ++|.
T Consensus 309 g~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~-~iaE 347 (617)
T 1m7x_A 309 GEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAV-TMAE 347 (617)
T ss_dssp --------CTTCCHHHHHHHHHHHHHHHHSSTTCE-EEEC
T ss_pred cccccccccccCCchHHHHHHHHHHHHHHHCCCeE-EEEe
Confidence 1110000112345788999999999999754 4554
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.26 Score=49.72 Aligned_cols=209 Identities=14% Similarity=0.160 Sum_probs=100.7
Q ss_pred ChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC-CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 115 DERVFKALDHVIVEARKNGVRLLLSLVNNLQAY-GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 115 de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~-gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
+...++.+.+.+.++.++|=-|.++.| |..+ .|...|. .. +..+ ..........+.|..+++.|+...+
T Consensus 87 ~~~~~~~i~~~i~~~~~rGGIvTlsWH--~~np~tg~~~~d---ts-~~~~----~~ilpGg~~~~~y~~~l~~iA~~l~ 156 (475)
T 3tp4_A 87 RDENIALFADYIRKADAIGGVNTVGAG--VENFVTGGSFYD---TS-GDTL----RAVLPGGSHHAELVAYLDDIAELAD 156 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEEEEE--SGGGSTTSTTCC-------CHH----HHHSTTSTTHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhCCCEEEEEeC--CCCCCCCCCccc---CC-HHHH----HHhcCCCchhHHHHHHHHHHHHHHH
Confidence 345667788788888888887888765 3222 1111000 00 0000 0000000012344455555443210
Q ss_pred CcccccccC-----CCceeEEeecCCCCCCCCC------ChHHHHHHHHHHHHHHHhc-CCCCEEEEccCCccCCCCCCC
Q 014151 194 TITGVEYRN-----DPTIFAWELINEPRCMSDP------SGDTLQDWIDEMSAFVKSI-DKKHLVTVGLEGFYGPKSPKR 261 (430)
Q Consensus 194 ~~tg~~yk~-----~p~I~~wel~NEp~~~~~~------~~~~~~~w~~~~~~~Ir~~-dp~~lV~~G~~g~~~~~~~~~ 261 (430)
. +++ -|.+ |-..-|.+..-.. +++.+++..+.+...+|+. .-+.++.+ |+...+..
T Consensus 157 ~-----Lk~~~g~gvPVl--~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwv-----wspn~~~~ 224 (475)
T 3tp4_A 157 A-----SRRDDGTLIPIV--FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYA-----WGPGGGFG 224 (475)
T ss_dssp H-----CBCTTSCBCCEE--EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEE-----ECCCSCCT
T ss_pred h-----hccccCCCceEE--EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEE-----EeCCCCCC
Confidence 0 443 2333 7777777743111 2466777789999999964 33455543 11111000
Q ss_pred cccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC
Q 014151 262 LTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI 341 (430)
Q Consensus 262 ~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~ 341 (430)
-+...+.. -+ -.+..+|++++-.|... ....+.. .+..-+....+.+++ .+||+.|+|+|.....
T Consensus 225 --~~~~~~~~----~Y---PGDdyVDiVG~D~Y~~~--~~~~f~~---~~~~~l~~l~~~A~~-~gKpiaItE~G~~~~~ 289 (475)
T 3tp4_A 225 --GNRDVYLR----TY---PGDAFVDVLGLDTYDST--GSDAFLA---GLVADLRMIAEIADE-KGKVSAFTRFGVSGGV 289 (475)
T ss_dssp --TCHHHHGG----GC---CCTTTCSEECCEEEESS--CCHHHHH---HHHHHHHHHHHHHHH-HTCEECBCEEEETTCS
T ss_pred --CCccchhh----cC---CCCCeEEEEEEeccCCC--CchhHHH---HHHHHHHHHHHHHhh-CCCcEEEEeeccCCCc
Confidence 00000000 00 02467999999999642 2221211 112223333344554 8999999999998621
Q ss_pred CCCChhHHHHHHHHHHHHHH
Q 014151 342 KGFEPSLRDKLYKTILDIVY 361 (430)
Q Consensus 342 ~~~~~~~r~~~~~~~~~~~~ 361 (430)
.. +...+..|++.+++.+.
T Consensus 290 ~~-~G~~da~W~t~~l~~i~ 308 (475)
T 3tp4_A 290 GT-NGSSPAQWFTKVLAAIK 308 (475)
T ss_dssp ST-TSCCCTTHHHHHHHHHH
T ss_pred cc-CCCchHHHHHHHHHHHH
Confidence 10 00123678888776553
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=94.79 E-value=0.4 Score=48.75 Aligned_cols=149 Identities=18% Similarity=0.246 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+-.-+.+.|+.++++|+|+|=+-.+.+. +|.. ....| .| -..+.|+++|++|+++||+||+++.-+ +.
T Consensus 54 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp-~~--Gt~~df~~Lv~~aH~~Gi~VilD~V~N--H~ 128 (488)
T 2wc7_A 54 DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDP-ML--GGNEAFKELLDAAHQRNIKVVLDGVFN--HS 128 (488)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECG-GG--THHHHHHHHHHHHHHTTCEEEEEECCS--BC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEeCCC--cC
Confidence 5667888899999999999998432111 1110 00111 11 236889999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCC-------CC----------CCCCCCCHHHHHHHHHHHHHHHhccCCccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGIS-------SS----------NDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~-------~~----------~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg 197 (430)
+. ...|..|..-.+.+.. .. ..-=+.+|++++.+.+.++..++. .+.|
T Consensus 129 s~~~~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl~~--gvDG 206 (488)
T 2wc7_A 129 SRGFFFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWLKF--GIDG 206 (488)
T ss_dssp CSSSHHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHH--TCCE
T ss_pred CCcCHHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHHHC--CCCE
Confidence 11 0123444321110100 00 001156789999999999888754 1222
Q ss_pred ccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 198 ~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
.+ .+..++... + .+++++.+.+|+..|+.. ++|
T Consensus 207 fR---------~D~~~~i~~------~---~~~~~~~~~~~~~~p~~~-~vg 239 (488)
T 2wc7_A 207 WR---------LDVPFEIKT------P---GFWQEFRDRTKAINPEAY-IVG 239 (488)
T ss_dssp EE---------ESSGGGCCC------T---THHHHHHHHHHHHCTTCE-EEE
T ss_pred EE---------EecccccCh------H---HHHHHHHHHHHhhCCCeE-EEE
Confidence 21 244444321 1 256777788888888754 455
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.43 Score=48.51 Aligned_cols=131 Identities=11% Similarity=0.162 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCChH-------HHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFDER-------VFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~de~-------~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
..++..+.+|++|++.+=+-. +-|| -|+. .-..|+-. ..+-+.+++++|+++||++-+.+.. |+
T Consensus 55 d~~~w~~~~k~aGaky~v~takHHdGf~lw~S---~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~-~d-- 128 (469)
T 3eyp_A 55 DCRQWMQTLKAAGIPAAILTAKHADGFCLWPS---KYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGP-HD-- 128 (469)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTCCBSSCC---TTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECS-SC--
T ss_pred CHHHHHHHHHHcCCCEEEEEEEeCCCccccCC---CCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeCh-hH--
Confidence 456777788999999876632 1122 1221 00112211 1267889999999999999987653 32
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHH
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQ 227 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~ 227 (430)
|.... ...|.++++.+.+..-+++++++ |+.-. ++=++-.+.... +.....
T Consensus 129 --------w~~~~--------~~~y~~~~Y~~~~~~Ql~ELlt~--------Yg~i~-~lW~Dg~~~~~~----~~~~~~ 179 (469)
T 3eyp_A 129 --------RHEHL--------SPLYTTERYKEYYAHQLGELMSD--------YGKIW-ETWWDGAGADEL----TTPVYR 179 (469)
T ss_dssp --------HHHHT--------STTCCHHHHHHHHHHHHHHHHHS--------SCCCC-EEECCCTTCTTC----CHHHHH
T ss_pred --------hCCCc--------CcccCcHHHHHHHHHHHHHHHhc--------CCccc-EEEeCCCCCCCc----cchhHh
Confidence 32210 01145678888889999999999 98422 332444443321 233455
Q ss_pred HHHHHHHHHHHhcCCCCEEE
Q 014151 228 DWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+|. +.||++.|+.+|.
T Consensus 180 ~w~----~~i~~~qP~~vi~ 195 (469)
T 3eyp_A 180 HWY----KIVREKQPDCVIF 195 (469)
T ss_dssp HHH----HHHHHHCTTCEEE
T ss_pred HHH----HHHHHHCcCcEEe
Confidence 665 7799999999885
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.54 Score=47.00 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC---CCCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND---GGYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~---g~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.+ .++.. ....| .| -..+.|++++++|+++||+||+++.-+ ..
T Consensus 33 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp-~~--Gt~~d~~~lv~~ah~~Gi~vilD~V~N--H~ 107 (424)
T 2dh2_A 33 GNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDP-NF--GSKEDFDSLLQSAKKKSIRVILDLTPN--YR 107 (424)
T ss_dssp CSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEECCTT--TT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCc-cC--CCHHHHHHHHHHHHHCCCEEEEEECCC--cC
Confidence 3567788889999999999999843321 01100 00111 01 137889999999999999999998642 12
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecC-CCCCCCCCChHHH
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN-EPRCMSDPSGDTL 226 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~N-Ep~~~~~~~~~~~ 226 (430)
+ . ..|+. -..|++++.+.+.++.-+++ .+.|.++ +..+ -|. .
T Consensus 108 s-~---~~wF~-------------~q~~~Vr~~~~~~~~~Wl~~--gvDGfRl---------D~v~~~~~---------~ 150 (424)
T 2dh2_A 108 G-E---NSWFS-------------TQVDTVATKVKDALEFWLQA--GVDGFQV---------RDIENLKD---------A 150 (424)
T ss_dssp S-S---STTCS-------------SCHHHHHHHHHHHHHHHHHH--TCCEEEE---------CCGGGSTT---------H
T ss_pred C-C---ccccc-------------ccCHHHHHHHHHHHHHHHHc--CCCEEEE---------eccccCCc---------c
Confidence 2 1 12331 02367788888877777764 3333333 1222 121 1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 227 QDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 227 ~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
..+++++.+.+++.+|+..+++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~i~~e 174 (424)
T 2dh2_A 151 SSFLAEWQNITKGFSEDRLLIAGT 174 (424)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEE
Confidence 134566666778888886666653
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=94.35 E-value=0.97 Score=45.95 Aligned_cols=132 Identities=16% Similarity=0.182 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCCh-------HHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFDE-------RVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~de-------~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
..++..+.++++|++.|=+-. +.|| -|+.- -..|+- ..-+-+.+++++|+++||++-+.+.. |+.+
T Consensus 63 d~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~---~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~-~d~~ 138 (478)
T 3ues_A 63 DVDQWMDALVAGGMAGVILTCKHHDGFCLWPSR---LTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSP-WDRT 138 (478)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCT---TCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECS-CCSS
T ss_pred CHHHHHHHHHHcCCCEEEEeEEecCCccccCCC---CCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeCh-HHhC
Confidence 456677788999999776632 1122 12210 011211 01367889999999999999886643 3211
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCC--CCCCCCCChHH
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE--PRCMSDPSGDT 225 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NE--p~~~~~~~~~~ 225 (430)
+..+-+++++.+.+...+++++++ |+... ++=+|-.+. |.... .
T Consensus 139 --------------------~~~y~~~~~y~~~~~~ql~EL~~~--------Yg~~~-~~W~Dg~~~~~~~~~~-----~ 184 (478)
T 3ues_A 139 --------------------EESYGKGKAYDDFYVGQLTELLTQ--------YGPIF-SVWLDGANGEGKNGKT-----Q 184 (478)
T ss_dssp --------------------CTTTTSSHHHHHHHHHHHHHHHHS--------SSCCS-EEEECCCCCCCTTSCC-----C
T ss_pred --------------------CcccCchHHHHHHHHHHHHHHHhc--------CCcce-EEEeeCCCCCCCccch-----h
Confidence 011123577888889999999999 97532 343565542 11100 0
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEE
Q 014151 226 LQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 226 ~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
...| .++.+.||++.|+.+|..
T Consensus 185 ~~~~-~~~~~~i~~~qP~~vi~~ 206 (478)
T 3ues_A 185 YYDW-DRYYNVIRSLQPDAVISV 206 (478)
T ss_dssp CCCH-HHHHHHHHHHCTTSEEEE
T ss_pred hhhH-HHHHHHHHHHCcCEEEEC
Confidence 1123 567888999999998864
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=94.16 E-value=0.76 Score=48.11 Aligned_cols=64 Identities=23% Similarity=0.325 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC--------CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG--------GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g--------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+.|+.++++|+|+|=+-.+.+. +|.. ....| .| -..+.|++++++|+++||+||+++.
T Consensus 146 dl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp-~~--Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 146 DIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RY--GSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccc-cC--CCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 4567788899999999999998432210 0110 01111 11 1356899999999999999999875
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=1 Score=48.00 Aligned_cols=152 Identities=14% Similarity=0.151 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-CCCC------ccc---cCCC----------CC---Ch--HHHHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-GGYN------SLQ---ISPG----------QF---DE--RVFKALDHVIVE 128 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g~~~------~~~---~~pg----------~~---de--~~l~~lD~~l~~ 128 (430)
.+-.-+.+.|+.++++|+|+|=+-...+ +... .+. ...| .| |+ -..+.|++++++
T Consensus 250 Gd~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~ 329 (695)
T 3zss_A 250 GTFRTAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTE 329 (695)
T ss_dssp CCHHHHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHH
Confidence 4677888899999999999999844321 1000 000 0001 01 11 135789999999
Q ss_pred HHHcCCEEEEeccCCcccCCCc---chhhhhhhh--hCCCCC--CCCC-------CCCCC--HHHHHHHHHHHHHHHhcc
Q 014151 129 ARKNGVRLLLSLVNNLQAYGGK---TQYVNWAWE--EGIGIS--SSND-------SFFFD--PSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 129 A~~~Gi~vil~l~~~w~~~gg~---~~y~~W~~~--~G~~~~--~~~~-------~f~~d--~~~~~~~~~~~~~lv~R~ 192 (430)
|+++||+||+++.-+ ..... ..++.|... .|.... .... --+.+ |++++.+.+.++..++.
T Consensus 330 aH~~GI~VilD~V~N--hs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~~- 406 (695)
T 3zss_A 330 AGKLGLEIALDFALQ--CSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDH- 406 (695)
T ss_dssp HHHTTCEEEEEECCE--ECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHCCCEEEEEeecc--CCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHHh-
Confidence 999999999997643 11111 123344421 111000 0000 11345 88888888888887763
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
.+.|.++ +..++ .-..+++++.+.||+..|+..+ +|
T Consensus 407 -GVDGfRl---------D~a~~----------~~~~f~~~~~~~v~~~~pd~~~-vg 442 (695)
T 3zss_A 407 -GVRIFRV---------DNPHT----------KPVAFWERVIADINGTDPDVIF-LA 442 (695)
T ss_dssp -TCCEEEE---------SSGGG----------SCHHHHHHHHHHHHHHCTTCEE-EE
T ss_pred -CCCEEEe---------cCcch----------hhHHHHHHHHHHHHhhCCCceE-EE
Confidence 2333222 22221 1235667888889999998655 44
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=93.45 E-value=0.5 Score=50.45 Aligned_cols=64 Identities=8% Similarity=0.185 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-C---CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-G---GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-g---~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+.|+.++++|+|+|=+-.+.+ . +|.. ....| .| -..+.|++++++|+++||+||+++.
T Consensus 263 dl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp-~~--Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDK-YL--GTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEecc
Confidence 456678889999999999998843211 0 0100 01111 11 1267899999999999999999975
|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=93.24 E-value=1.1 Score=45.19 Aligned_cols=102 Identities=23% Similarity=0.231 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
..|+.-++.|..++++|+||+|++-..|.. .| ...+ +++.++.|.+-++.+++.
T Consensus 225 ~~L~~~~~~v~~lq~~glKVllSIgGg~~~-~g------------------f~~l--s~~~r~~Fa~~v~~~v~~----- 278 (451)
T 3poh_A 225 YLLDNNETLLQPLRRRGVKVLLGLLGNHDI-TG------------------LAQL--SEQGAKDFAREVAQYCKA----- 278 (451)
T ss_dssp HHHHTHHHHTHHHHHTTCEEEEEEECCSSS-CC------------------TTCB--CHHHHHHHHHHHHHHHHH-----
T ss_pred HhhhChHHHHHHHHHCCCEEEEEECcCCCC-CC------------------cccC--CHHHHHHHHHHHHHHHHH-----
Confidence 345555899999999999999987543320 01 1122 678899999999999999
Q ss_pred cccccCCCceeEEeecCCCCCC----CCCChHHHHHHHHHHHHHHHhcCCCCEEEEccC
Q 014151 197 GVEYRNDPTIFAWELINEPRCM----SDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLE 251 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~~~----~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~ 251 (430)
|+=|--=+=||--+.+... ..++.+.+..+++++.+++ |+.+|++...
T Consensus 279 ---yglDGIDiDwEYp~~~~~g~~~~~~~d~~nf~~Ll~eLR~~l----p~kllT~A~~ 330 (451)
T 3poh_A 279 ---YNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM----PDKLVTVFDW 330 (451)
T ss_dssp ---TTCCEEEEECCSCCCCCTTSTTBCSCCHHHHHHHHHHHHHHC----TTSEEEEECC
T ss_pred ---hCCCcEEEeccCCCCCCCCCCCcCCCCHHHHHHHHHHHHHhC----CCCEEEEEec
Confidence 8766444455554433211 1123456666666655443 6789988653
|
| >1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* | Back alignment and structure |
|---|
Probab=93.23 E-value=5 Score=41.05 Aligned_cols=145 Identities=8% Similarity=0.139 Sum_probs=88.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccc---------cC-CCCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQ---------IS-PGQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~---------~~-pg~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
.+.+.+.+.++.|+..++|++-++.-.+-+|+ .+. .. .|.|.+ +.+.++++.|+++||.|
T Consensus 171 ~~~~~ik~~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~---~di~eiv~yA~~rgI~V 247 (512)
T 1jak_A 171 FGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTK---AEYKEIVRYAASRHLEV 247 (512)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCH---HHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCccccCCCCCCCCCH---HHHHHHHHHHHHcCCEE
Confidence 46889999999999999999998765443343 110 01 134553 56889999999999999
Q ss_pred EEeccCCcccCCCcc----hhhhhhhhhCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 137 LLSLVNNLQAYGGKT----QYVNWAWEEGIGIS-------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 137 il~l~~~w~~~gg~~----~y~~W~~~~G~~~~-------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
|+.+.. +|-.. .|+.-.+ .|.... ....-...+|++.+..++.+++++.- |.. +.
T Consensus 248 IPEID~----PGH~~a~l~aypeL~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~l--------Fp~-~~ 313 (512)
T 1jak_A 248 VPEIDM----PGHTNAALASYAELNC-DGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAAL--------TPG-RY 313 (512)
T ss_dssp EEECCC----SSSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHT--------CCS-SE
T ss_pred EEccCC----CchHHHHHHhCHHhcC-cCCCCccccccCcCCcccCCCCHHHHHHHHHHHHHHHHh--------CCC-Ce
Confidence 997632 22111 1222111 111100 00111245788999999999999886 431 22
Q ss_pred eeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 014151 206 IFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 206 I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d 241 (430)
| -+ +-|.... ..+....|++++.+.+++.+
T Consensus 314 i---HiGgDE~~~~---~~~l~~~f~~~v~~~v~~~G 344 (512)
T 1jak_A 314 L---HIGGDEAHST---PKADFVAFMKRVQPIVAKYG 344 (512)
T ss_dssp E---ECCCCCCTTS---CHHHHHHHHHHHHHHHHHTT
T ss_pred E---EECCcccccc---hHHHHHHHHHHHHHHHHhcC
Confidence 1 12 1232211 24667789999999998764
|
| >1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 | Back alignment and structure |
|---|
Probab=92.97 E-value=3 Score=40.84 Aligned_cols=148 Identities=11% Similarity=0.151 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc----c---------CCC----------CCChHHHHHHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ----I---------SPG----------QFDERVFKALDHVIVEAR 130 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~----~---------~pg----------~~de~~l~~lD~~l~~A~ 130 (430)
.+.+.+.+.++.|+..++|++-++.-.+-+|+ ++ + ..| .|. -+.+.++++.|+
T Consensus 30 ~~~~~ik~~id~mA~~KlN~lH~HltDdq~~r-le~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT---~~di~eiv~YA~ 105 (367)
T 1yht_A 30 YSPEVIKSFIDTISLSGGNFLHLHFSDHENYA-IESHLLNQRAENAVQGKDGIYINPYTGKPFLS---YRQLDDIKAYAK 105 (367)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECBSSSCBC-BCBTTTTBCGGGSEECTTSCEECTTTCCEEBC---HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEEcCCCce-eeecchhhhhhhhccccCCCcCCCCCCCCCcC---HHHHHHHHHHHH
Confidence 46889999999999999999998664433453 21 0 112 244 456789999999
Q ss_pred HcCCEEEEeccCCcccCCCcchhhhhh---------hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 131 KNGVRLLLSLVNNLQAYGGKTQYVNWA---------WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 131 ~~Gi~vil~l~~~w~~~gg~~~y~~W~---------~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
++||.||+.+.. +|-......+. ....... ....--.++|++.+..++.+++++.- +.
T Consensus 106 ~rgI~VIPEID~----PGH~~a~l~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~t~~fl~~v~~Ev~~l--------Fp 172 (367)
T 1yht_A 106 AKGIELIPELDS----PNHMTAIFKLVQKDRGVKYLQGLKSRQ-VDDEIDITNADSITFMQSLMSEVIDI--------FG 172 (367)
T ss_dssp HTTCEEEEEEEE----SSSCHHHHHHHHHHHCHHHHHHHBCSS-CTTSBCTTCHHHHHHHHHHHHHHHHH--------HG
T ss_pred HcCCEEEEeccc----hHHHHHHHHhcccccCcccccccCCCC-CCceeCCCCHHHHHHHHHHHHHHHHh--------cC
Confidence 999999997631 22111111110 0000000 11112246788999999999999987 65
Q ss_pred C-CCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 014151 202 N-DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 202 ~-~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d 241 (430)
+ .+.|- -=+-|..... .....+..|++++.+.+++.+
T Consensus 173 ~~s~~iH--iGgDE~~~~~-~~~~~~~~f~~~~~~~v~~~g 210 (367)
T 1yht_A 173 DTSQHFH--IGGDEFGYSV-ESNHEFITYANKLSYFLEKKG 210 (367)
T ss_dssp GGCSEEE--EECCSCCTTS-CCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccEEE--eCCccccccc-cchHHHHHHHHHHHHHHHHCC
Confidence 3 22221 1123332211 134678889999999999864
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=92.35 E-value=4.4 Score=43.33 Aligned_cols=159 Identities=15% Similarity=0.228 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc----cCCC--CCChHHHHH-HHHHHHHHHHcCCEEEEeccCCccc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ----ISPG--QFDERVFKA-LDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~----~~pg--~~de~~l~~-lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+++.+.+.++.++++|++.+=+ .+ .|..-. ..-| ..|++.|-. +..+++.++++||++.|-+...--.
T Consensus 343 ~~e~~i~~~ad~~~~~G~~~~vi---DD-gW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~GlW~~P~~v~ 418 (720)
T 2yfo_A 343 FTGDTIVDLAKEAASLGIDMVVM---DD-GWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMIN 418 (720)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEE---CS-SSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEEEEEECTTEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEE---Cc-ccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEEEEEecccccC
Confidence 47889999999999999986544 44 352111 1123 345666654 9999999999999998854321000
Q ss_pred CCC--cchhhhhhhhh-CCCCCCCCCC---CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC
Q 014151 147 YGG--KTQYVNWAWEE-GIGISSSNDS---FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD 220 (430)
Q Consensus 147 ~gg--~~~y~~W~~~~-G~~~~~~~~~---f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~ 220 (430)
... ...++.|.... +......... -+++|++++.+.+.++.+++. |+ -..|- ||- |+......
T Consensus 419 ~~S~l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~--------~G-IDy~K-~D~-n~~~~~~~ 487 (720)
T 2yfo_A 419 EDSDLYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQ--------GK-IDYVK-WDM-NRSMADVY 487 (720)
T ss_dssp SSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT--------SC-CCEEE-ECC-CSCCCSCC
T ss_pred CCCHHHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHH--------cC-CCEEE-ECC-CCCccccC
Confidence 000 11345565321 1111011111 257899999999999998887 42 11222 552 33221110
Q ss_pred CChHHHHHH---HHHHHHHHHhcCCCCEEEE
Q 014151 221 PSGDTLQDW---IDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 221 ~~~~~~~~w---~~~~~~~Ir~~dp~~lV~~ 248 (430)
+...+.+. +.++.+.||+..|+.++..
T Consensus 488 -~~~~~~~y~~~~y~l~~~l~~~~p~v~~e~ 517 (720)
T 2yfo_A 488 -AGNLSYDYVLGVYDFMERLCSRYPDLLLEG 517 (720)
T ss_dssp -STTHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred -CccHHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 11113333 3466778888889877654
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=91.95 E-value=0.19 Score=51.69 Aligned_cols=66 Identities=21% Similarity=0.378 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC--C---CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND--G---GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~--g---~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+-|+.+|++|+|+|-+-.+.+ + +|.. ..+.| .| -..+.|+++|++|+++||+||+++.-
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp-~~--Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDP-QY--GTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCc-cc--CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3566677789999999999999844321 1 1111 01112 11 13577999999999999999999753
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=91.93 E-value=1.1 Score=45.19 Aligned_cols=137 Identities=9% Similarity=0.107 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCChH----HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFDER----VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK 150 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~de~----~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~ 150 (430)
..++..+.+|++|++.|=+-. +-|| -|+.- -..|+.. ..+-+.+++++|+++||++-+.++. |+.+ .
T Consensus 79 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk---~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~-~dw~--~ 152 (450)
T 2wvv_A 79 DAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSK---YTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSV-MDWS--N 152 (450)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCT---TCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEES-CCTT--C
T ss_pred CHHHHHHHHHHcCCcEEEEEEeecCCccccCCC---CCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecH-HHhc--C
Confidence 346677788999999877633 1122 12210 0112211 2467889999999999999987654 3221 1
Q ss_pred chhhhhhhhhCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHH
Q 014151 151 TQYVNWAWEEGIGISSSNDSFF----FDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTL 226 (430)
Q Consensus 151 ~~y~~W~~~~G~~~~~~~~~f~----~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~ 226 (430)
+.|. .+..+- ..+++.+.+...+++|+++ |+ .|.++=+|-.++..+ ...
T Consensus 153 ---p~y~---------~~~~~~~~~~~~~~y~~~~~~Ql~ELlt~--------YG-~~d~lWfDg~~~~~~------~~~ 205 (450)
T 2wvv_A 153 ---PDYR---------YDIKSKEDSIAFSRFLEFTDNQLKELATR--------YP-TVKDFWFDGTWDASV------KKN 205 (450)
T ss_dssp ---TTCC---------SSCCSHHHHHHHHHHHHHHHHHHHHHHHH--------CT-TCCEEEEESCCSHHH------HHT
T ss_pred ---Cccc---------ccccccccccchHHHHHHHHHHHHHHHHc--------CC-CcCEEEEcCCCCcCc------chh
Confidence 1110 000000 0145667778889999999 96 466765665443211 111
Q ss_pred HHHHHHHHHHHHhcCCCCEEE
Q 014151 227 QDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 227 ~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
.-...++.+.||+..|+.+|.
T Consensus 206 ~~~~~~~~~~i~~~qP~~vv~ 226 (450)
T 2wvv_A 206 GWWTAHAEQMLKELVPGVAIN 226 (450)
T ss_dssp HHHHHHHHHHHHHHSTTCEEB
T ss_pred hHHHHHHHHHHHHhCCcEEEE
Confidence 223567888899999988875
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=91.88 E-value=7 Score=41.80 Aligned_cols=160 Identities=14% Similarity=0.256 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc----cCCC--CCChHHHH-HHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ----ISPG--QFDERVFK-ALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~----~~pg--~~de~~l~-~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+++.+.+.++.++++|++.+=+ .+ +|..-. ...| .+|++.|- .|..+++.++++||++.+-+...--.
T Consensus 344 ~tee~il~~ad~~~~~G~e~fvi---DD-GW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~ih~~Glk~glW~~Pe~v~ 419 (745)
T 3mi6_A 344 FNEAKLMTIVNQAKRLGIEMFVL---DD-GWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKFGLWFEPEMVS 419 (745)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEE---CT-TCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEEECTTEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEE---Cc-ccccCCCCCcccCCCceeChhhcCccHHHHHHHHHHCCCEEEEEEcccccC
Confidence 47899999999999999995443 44 353211 1123 23444443 48899999999999998854331000
Q ss_pred CCC--cchhhhhhhhh-CCCCCCCCC---CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCC--C
Q 014151 147 YGG--KTQYVNWAWEE-GIGISSSND---SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRC--M 218 (430)
Q Consensus 147 ~gg--~~~y~~W~~~~-G~~~~~~~~---~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~--~ 218 (430)
... ...++.|.... ++....... --+++|++++.+.+.++.++.. |+ -..|- || +||.-. .
T Consensus 420 ~dS~l~~~hPdw~l~~~~g~~~~~r~~~vLD~tnPevr~~i~~~l~~ll~~--------~G-IDy~K-~D-~nr~i~~~~ 488 (745)
T 3mi6_A 420 VDSDLYQQHPDWLIHAPKSTPTPGRHQFVLDMARPEVVDYLFKLMSQMIES--------AN-LDYIK-WD-MNRYATEMF 488 (745)
T ss_dssp SSSSHHHHCGGGBCCCTTCCCCCSSSCEEBCTTCHHHHHHHHHHHHHHHHH--------HT-CSEEE-EC-CCSCCCSCC
T ss_pred CCCHHHHhCcceEEEcCCCceeecCCeEEECCCCHHHHHHHHHHHHHHHHH--------CC-CCEEE-EC-CCCCCcccC
Confidence 000 12345665331 111101111 1167899999999999999887 43 22232 55 555321 1
Q ss_pred CCC-----ChHHHHHHHH---HHHHHHHhcCCCCEEEE
Q 014151 219 SDP-----SGDTLQDWID---EMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 219 ~~~-----~~~~~~~w~~---~~~~~Ir~~dp~~lV~~ 248 (430)
... ..+.+.+.+. ++.+.||+.-|+.+|-.
T Consensus 489 ~~~~~~~~q~~~~~~y~~g~y~ll~~l~~~~P~v~ie~ 526 (745)
T 3mi6_A 489 SSRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLFES 526 (745)
T ss_dssp CSSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCcCccccccHHHHHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 110 1123344433 44566778899988853
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=91.74 E-value=0.28 Score=49.19 Aligned_cols=66 Identities=11% Similarity=0.194 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C---CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G---GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g---~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.. . +|... ...| .| -..+.|++++++|+++||+||+++.-
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp-~~--Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKA-EY--GSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3567788889999999999999843221 1 11110 1111 11 12678999999999999999999753
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=91.39 E-value=4 Score=40.31 Aligned_cols=119 Identities=12% Similarity=0.114 Sum_probs=60.5
Q ss_pred EeecCCCCCCC------CCChHHHHHHHHHHHHHHHhc-CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc-
Q 014151 209 WELINEPRCMS------DPSGDTLQDWIDEMSAFVKSI-DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN- 280 (430)
Q Consensus 209 wel~NEp~~~~------~~~~~~~~~w~~~~~~~Ir~~-dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~- 280 (430)
|-..-|.+..- ..+++.+++..+.+...+|+. .-+.++.+= +.... .++ .+... .++..-
T Consensus 193 ~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvw-----sp~~~-~~~-~~~~~-----~~~~~~Y 260 (396)
T 2vx5_A 193 FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAY-----SPDRS-RID-MANFE-----AGYLYGY 260 (396)
T ss_dssp EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEE-----CCBGG-GSC-GGGHH-----HHHTTTC
T ss_pred EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEE-----cCCCC-ccc-cCCCc-----cchhhcC
Confidence 88888887431 113678888889999999954 445566431 11000 000 00000 000000
Q ss_pred cCCCCcceEEeeecCCCCCCC--cchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCC
Q 014151 281 SNNDNIDFASVHIYPDHWFHD--LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNL 340 (430)
Q Consensus 281 ~~~~~iD~~s~H~Y~~~w~~~--~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~ 340 (430)
-.+..+|++++-.|...-... .....-.+.+...+....+.++. .+||+.|+|+|....
T Consensus 261 PGDdyVDivG~D~Y~~~~~~~~~~~~~~f~~~~~~~~~~l~~~a~~-~~Kpial~E~G~~~~ 321 (396)
T 2vx5_A 261 PGDAYVDIIGLDNYWDVGHEANTASADEQKAALTASLKQLVQIARS-KGKIAALTETGNNRL 321 (396)
T ss_dssp CCGGGCSEEEEECCGGGTCTTCCSCHHHHHHHHHHHHHHHHHHHHH-HTCEEEEEEECCTTC
T ss_pred CCCceEEEEEEeccCCCCCCccccchhhHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCCCC
Confidence 023569999999996410010 01111011122233333444543 799999999998654
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=91.28 E-value=2.4 Score=46.34 Aligned_cols=152 Identities=16% Similarity=0.219 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-------------------CC--C--Ccc---ccCCCCCC------hHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-------------------GG--Y--NSL---QISPGQFD------ERVFKA 121 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-------------------g~--~--~~~---~~~pg~~d------e~~l~~ 121 (430)
.+...+.+.|+.++++|+|+|-+....+ +. | .+. .+. ..|. ....+.
T Consensus 293 Gt~~gl~~~L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynwGY~~~~~~a~~-~~yGt~p~~~~~~~~e 371 (877)
T 3faw_A 293 GTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALS-GMYSEKPKDPSARIAE 371 (877)
T ss_dssp TSHHHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCSBSCSSSBC-STTCSCTTSTTHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcchhcccccccccccccccccCCCCCCccCcCcCcccccc-ccccCCCCCcchHHHH
Confidence 3556677789999999999999844321 00 1 100 111 1221 123788
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcch----hhhhh---hhhCCCCC-CCCCCC-CCCHHHHHHHHHHHHHHHhcc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ----YVNWA---WEEGIGIS-SSNDSF-FFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~----y~~W~---~~~G~~~~-~~~~~f-~~d~~~~~~~~~~~~~lv~R~ 192 (430)
|..+|++|+++||+||+++.-+ ..+.... .+.|. ...|.... ....++ +.+|.+++.+.+.++..++.
T Consensus 372 fk~lV~~~H~~GI~VILDvV~N--H~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e- 448 (877)
T 3faw_A 372 LKQLIHDIHKRGMGVILDVVYN--HTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE- 448 (877)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT--CCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCEEEEEEeec--cccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999997532 1111100 01121 11111000 000111 45688999999999999885
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+=+ -+=+++.... -..+++++...+|+.+|+.. .+|
T Consensus 449 -------~gVD--GFRfD~a~~~----------~~~~~~~~~~~~~~~~P~~~-lig 485 (877)
T 3faw_A 449 -------FKVD--GFRFDMMGDH----------DAAAIELAYKEAKAINPNMI-MIG 485 (877)
T ss_dssp -------HCCC--EEEETTGGGS----------BHHHHHHHHHHHHHHCTTCE-EEE
T ss_pred -------cCCc--EEEEecCCcC----------CHHHHHHHHHHHHhhCCCcE-EEE
Confidence 4321 1223333211 12344566777888899754 455
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=91.20 E-value=0.43 Score=47.35 Aligned_cols=64 Identities=17% Similarity=0.150 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-C---CCCc---cccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-G---GYNS---LQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-g---~~~~---~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+.|+.++++|+|+|=+-...+ . +|.+ .... | .| -..+.|.+++++|+++||+||+++.
T Consensus 19 ~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~-~~--Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDAS-KY--GNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGC-TT--CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCc-cC--CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467778889999999999999844321 1 1111 1111 1 11 1267889999999999999999875
|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
Probab=90.87 E-value=18 Score=38.69 Aligned_cols=158 Identities=11% Similarity=0.174 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-----------ccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-----------SLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-----------~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+++.+.+..+.|+++|++.+=+ .+| |. .+++.|.+|- +.|..+++.++++||++=|=+..
T Consensus 343 ~~e~~i~~~ad~aa~lG~e~fvi---DDG-Wf~~r~~d~~~lGdW~~d~~kFP----~Glk~Lad~vh~~GmkfGLW~ep 414 (729)
T 4fnq_A 343 FNEEKLVNIAKTEAELGIELFVL---DDG-WFGKRDDDRRSLGDWIVNRRKLP----NGLDGLAKQVNELGMQFGLWVEP 414 (729)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEE---CSC-CBTTCCSTTSCTTCCSBCTTTCT----THHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHhcCccEEEE---cce-eecCCCCCcccCCcEEEChhhcC----ccHHHHHHHHHHCCCEEEEEeec
Confidence 47899999999999999997655 443 42 1233333332 46889999999999999773321
Q ss_pred CcccCCC--cchhhhhhhhh-CCCCCCCCC---CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCC
Q 014151 143 NLQAYGG--KTQYVNWAWEE-GIGISSSND---SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216 (430)
Q Consensus 143 ~w~~~gg--~~~y~~W~~~~-G~~~~~~~~---~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~ 216 (430)
..-.... ...++.|.... +.+...... --+++|++++.+.+.+..+++. |+= . -+=||-...+.
T Consensus 415 e~v~~~S~l~~~hPdw~~~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~--------~Gi-d-YiK~D~n~~~~ 484 (729)
T 4fnq_A 415 EMVSPNSELYRKHPDWCLHVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLAS--------API-T-YVKWDMNRHMT 484 (729)
T ss_dssp TEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT--------TTC-C-EEEEECCCCCC
T ss_pred cccCCCcHHHHhCchheeccCccCCccCCccccccCCChhHHHHHHHHHHHHHHH--------CCC-C-EEEEcCCCCCC
Confidence 1000000 01234554321 111101111 1257899999988888888887 542 2 33477544333
Q ss_pred CCCCC------ChHHHHH---HHHHHHHHHHhcCCCCEEEEc
Q 014151 217 CMSDP------SGDTLQD---WIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 217 ~~~~~------~~~~~~~---w~~~~~~~Ir~~dp~~lV~~G 249 (430)
..... ..+...+ -+.++...|++..|+.++...
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~y~l~d~L~~~~P~i~ie~C 526 (729)
T 4fnq_A 485 EIGSSALPPERQRETAHRYMLGLYRVMDEMTSRFPHILFESC 526 (729)
T ss_dssp SCCCTTSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHCCCcEEEcc
Confidence 22111 1122222 234566778888999887654
|
| >2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* | Back alignment and structure |
|---|
Probab=90.74 E-value=2.7 Score=43.88 Aligned_cols=68 Identities=9% Similarity=0.050 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+++.+.+.+.++.|+..++|++-++...+-.++.. -++.|..+..+.+.++++.|+++||.||..++.
T Consensus 162 ~~~~~~ik~~id~ma~~KlN~~h~Hl~DDq~~~~~--wr~~Yp~~~~~~i~elv~yA~~rgI~vv~~i~P 229 (594)
T 2v5c_A 162 PWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREK--WREPYPESEMQRMQELINASAENKVDFVFGISP 229 (594)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECCTTCGGGTTT--TTSCCCGGGHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEEecccCcccccc--cCCCCCHHHHHHHHHHHHHHHHCCcEEEEecCC
Confidence 35789999999999999999998866433111111 113465555778999999999999999988754
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.88 E-value=0.89 Score=46.60 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C---CCCccc-cCCCC------CCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G---GYNSLQ-ISPGQ------FDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g---~~~~~~-~~pg~------~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+...+.+.|+.++++|+|+|=+-...+ + +|...- ...+. .|+ -..+.|.++|++|+++||+||++
T Consensus 22 ~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD 101 (515)
T 1hvx_A 22 LWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYAD 101 (515)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 466777889999999999999844322 1 111100 00111 111 23678999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 102 ~V 103 (515)
T 1hvx_A 102 VV 103 (515)
T ss_dssp EC
T ss_pred Ee
Confidence 75
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=89.87 E-value=0.57 Score=46.95 Aligned_cols=66 Identities=15% Similarity=0.312 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccC---C----CCCccc-cCCCCC------Ch--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFND---G----GYNSLQ-ISPGQF------DE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~---g----~~~~~~-~~pg~~------de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
...+.+.++.++++|+|+|=+-...+ + +|.+.- ..+|.| ++ -..+.|.+++++|+++||+||++
T Consensus 27 ~~gi~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD 106 (435)
T 1mxg_A 27 WDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIAD 106 (435)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56677889999999999998743211 1 111100 012222 11 13678999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 107 ~V 108 (435)
T 1mxg_A 107 VV 108 (435)
T ss_dssp EC
T ss_pred EC
Confidence 75
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=89.68 E-value=0.48 Score=49.10 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.+ . +|... ...| .| -..+.|++++++|+++||+||+++.-
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp-~~--Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMK-EY--GTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3567788889999999999999843211 0 11110 1111 11 13678999999999999999999753
|
| >3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=89.55 E-value=1.3 Score=44.48 Aligned_cols=138 Identities=12% Similarity=0.112 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCCh-------HHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFDE-------RVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~de-------~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
..++..+.++++|++.+=+-. +.+| -|+. .-..|+- ...+-+.++.++|+++||++-+.+...|..+
T Consensus 60 d~~~w~~~~k~aGaky~v~t~kHHdGf~lw~s---~~t~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~~g~Y~S~~W~~~ 136 (443)
T 3gza_A 60 NTDQWVQAAKAAGCKFAVLTATHETGFGLWQS---DVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGIRWNSL 136 (443)
T ss_dssp CHHHHHHHHHTTTCSEEEEESCCSSCCBSSCC---SSCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECCSCBTT
T ss_pred CHHHHHHHHHHcCCCEEEEeeEeCCCcccCCC---CCCCcccccCCccCCCcCHHHHHHHHHHHcCCeEEEEECccccCc
Confidence 456677788999999876632 1122 1221 1111221 1146788999999999999999776457543
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHH
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFF--FDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDT 225 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~--~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~ 225 (430)
.+...+.. .....|- .++.+.+.+...+++|+++ |+.- .++=+|-..+-.. . .
T Consensus 137 ~~~~~~~~----------~~~~~~~~~~~~~y~~~~~~Ql~ELlt~--------Ygpi-d~lWfDg~~~~~~-~-----~ 191 (443)
T 3gza_A 137 LGIHNFKA----------EGEGAFARNRQAWYKRLCEKMVTELCTR--------YGDL-YMIWFDGGADDPR-A-----D 191 (443)
T ss_dssp TTEETTEE----------SCCHHHHHHHHHHHHHHHHHHHHHHHHS--------SCCC-SEEEETTCCCCTT-T-----T
T ss_pred cccccccc----------ccccccCccccHHHHHHHHHHHHHHHHh--------CCCc-cEEEEeCCCCccc-c-----C
Confidence 21110000 0000010 1245677778889999999 9752 3444566542110 0 0
Q ss_pred HHHHHHHHHHHHHhcCCCCEEE
Q 014151 226 LQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 226 ~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
| .++.+.||++.|+.+|.
T Consensus 192 ---~-~~~~~~i~~~qP~~vi~ 209 (443)
T 3gza_A 192 ---G-PDVEPIVNKYQPNCLFY 209 (443)
T ss_dssp ---S-CCCHHHHHHHCTTSEEE
T ss_pred ---H-HHHHHHHHHHCcCEEEE
Confidence 1 24556789999998886
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=89.51 E-value=1 Score=46.30 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=44.0
Q ss_pred CH-HHHHHHHHHHHHcCCCEEEEccccC----------C----CCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEE
Q 014151 75 SR-ARVGAMLQAGAKMGLTVCRTWAFND----------G----GYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 75 ~~-~~~~~~~~~~~~~G~n~vR~~~~~~----------g----~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vi 137 (430)
+- .-+.+.|+.++++|+|+|=+-...+ . +|.-.... | .| -..+.|++++++|+++||+||
T Consensus 34 d~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p-~~--Gt~~dfk~Lv~~aH~~GI~Vi 110 (527)
T 1gcy_A 34 DWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNG-RY--GSDAQLRQAASALGGAGVKVL 110 (527)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCS-SS--CCHHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCC-CC--CCHHHHHHHHHHHHHCCCEEE
Confidence 45 6778889999999999998744321 0 01101111 1 11 136789999999999999999
Q ss_pred Eecc
Q 014151 138 LSLV 141 (430)
Q Consensus 138 l~l~ 141 (430)
+++.
T Consensus 111 lD~V 114 (527)
T 1gcy_A 111 YDVV 114 (527)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9975
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=89.29 E-value=0.33 Score=51.33 Aligned_cols=64 Identities=11% Similarity=0.204 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-C---CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-G---GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-g---~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+-|+.++++|+|+|=+-.+.. . +|.. ..+.| .| -..+.|+++|++|+++||+||+++.
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp-~~--Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVAR-RL--GGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECG-GG--TCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCc-cc--CCHHHHHHHHHHhhhcCCEEEEEec
Confidence 445577789999999999999843211 0 1110 01111 11 1357899999999999999999975
|
| >2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=89.27 E-value=2.4 Score=45.46 Aligned_cols=68 Identities=9% Similarity=0.053 Sum_probs=48.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+++.+.+.+.++.|+..++|++-++...+..|+... .+.|..+..+.+.++++.|+++||+||..++.
T Consensus 162 ~~~~~~~~~~id~ma~~K~N~~h~hl~Dd~~~~~~w--r~~y~~~~~~~~~elv~ya~~rgI~vv~~i~P 229 (737)
T 2v5d_A 162 PWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKW--REPYPESEMQRMQELINASAENKVDFVFGISP 229 (737)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECCCSCCSTTTTTC-------CTTHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEecccccchhhcc--CcCCCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 356899999999999999999987654332222111 13354444678999999999999999988764
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=88.95 E-value=0.56 Score=47.15 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=41.7
Q ss_pred HHHHHH-HHHHHHHcCCCEEEEccccC---CC-C-CccccCCCCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 76 RARVGA-MLQAGAKMGLTVCRTWAFND---GG-Y-NSLQISPGQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 76 ~~~~~~-~~~~~~~~G~n~vR~~~~~~---g~-~-~~~~~~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
-.-+.+ .++.++++|+|+|=+-...+ +. | ....+..-..|+ -..+.|++++++|+++||+||+++.
T Consensus 13 ~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 13 WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 444554 46999999999999844221 10 1 111111001111 2367899999999999999999874
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=88.79 E-value=1.2 Score=45.19 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C---CCCccc-cCCCC------CCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G---GYNSLQ-ISPGQ------FDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g---~~~~~~-~~pg~------~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+..-+.+.|+.++++|+|+|=+-...+ + +|...- ..++. .|+ -..+.|.+++++|+++||+||++
T Consensus 21 ~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 100 (480)
T 1ud2_A 21 HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGD 100 (480)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 466778889999999999999844221 1 111100 01111 111 13678999999999999999998
Q ss_pred ccC
Q 014151 140 LVN 142 (430)
Q Consensus 140 l~~ 142 (430)
+.-
T Consensus 101 ~V~ 103 (480)
T 1ud2_A 101 VVM 103 (480)
T ss_dssp ECC
T ss_pred Ecc
Confidence 753
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=88.79 E-value=1.2 Score=45.24 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C---CCCccc-cCCCC------CCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G---GYNSLQ-ISPGQ------FDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g---~~~~~~-~~pg~------~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+..-+.+.|+.++++|+|+|=+-...+ + +|...- ..++. .|+ -..+.|.+++++|+++||+||++
T Consensus 19 ~~~gi~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD 98 (483)
T 3bh4_A 19 HWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGD 98 (483)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 466778889999999999999844321 1 111000 00111 111 13678999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 99 ~V 100 (483)
T 3bh4_A 99 VV 100 (483)
T ss_dssp EC
T ss_pred Ec
Confidence 75
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=88.55 E-value=0.9 Score=45.58 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=48.2
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHH-HHHHHcCCCEEEEccccCC---------CCCccccCCCCCCh--HHH
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAML-QAGAKMGLTVCRTWAFNDG---------GYNSLQISPGQFDE--RVF 119 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~n~vR~~~~~~g---------~~~~~~~~pg~~de--~~l 119 (430)
+|+.+.+..++ | ....+.+.+ +.++++|+++|=+.+..+. .|...++..=..++ -..
T Consensus 8 ~g~~~i~~~f~--W---------~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~ 76 (496)
T 4gqr_A 8 QGRTSIVHLFE--W---------RWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNE 76 (496)
T ss_dssp TTCCEEEEETT--C---------CHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCH
T ss_pred CCCcEEEEecC--C---------CHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCH
Confidence 45555565554 2 234555555 5699999999998543220 02223321100111 135
Q ss_pred HHHHHHHHHHHHcCCEEEEecc
Q 014151 120 KALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+.|+++|++|+++||+||+++.
T Consensus 77 ~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 77 DEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEEc
Confidence 6789999999999999999875
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=88.50 E-value=3.2 Score=40.91 Aligned_cols=129 Identities=9% Similarity=0.160 Sum_probs=67.9
Q ss_pred EeecCCCCCC-----CC-CChHHHHHHHHHHHHHHHh-cCCCCEEEEc-cCCccCCCCCCCcccCccchhhccCcchhhc
Q 014151 209 WELINEPRCM-----SD-PSGDTLQDWIDEMSAFVKS-IDKKHLVTVG-LEGFYGPKSPKRLTVNPEMWASALGSDFIRN 280 (430)
Q Consensus 209 wel~NEp~~~-----~~-~~~~~~~~w~~~~~~~Ir~-~dp~~lV~~G-~~g~~~~~~~~~~~~np~~w~~~~g~df~~~ 280 (430)
|-..-|.+.. .. ++++.+++..+.+...+|+ ...+.++.+= ..+....+.......-|
T Consensus 170 ~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~YP-------------- 235 (386)
T 1odz_A 170 FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYP-------------- 235 (386)
T ss_dssp EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCC--------------
T ss_pred EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCccchhhcCC--------------
Confidence 7888887742 11 1367888888999999994 4445566541 11000000000000111
Q ss_pred cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCC--CCCChhHHHHHHHHHHH
Q 014151 281 SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLI--KGFEPSLRDKLYKTILD 358 (430)
Q Consensus 281 ~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~--~~~~~~~r~~~~~~~~~ 358 (430)
.+..+|++++-.|... .....+. +.+...+....+.++. .+||+.|+|+|..... .+ .....|++++++
T Consensus 236 -GDdyVDivG~D~Y~~~-~~~~~f~---~~~~~~l~~~~~~A~~-~~Kpial~E~G~~~~~p~~G---~~d~~W~~~l~~ 306 (386)
T 1odz_A 236 -GDEWVDVLGFDTYGPV-ADNADWF---RNVVANAALVARMAEA-RGKIPVISGIGIRAPDIEAG---LYDNQWYRKLIS 306 (386)
T ss_dssp -CTTTCSEECCEEEECS-SSCHHHH---HHHHHHHHHHHHHHHH-HTCEECBCEEEECHHHHHTT---CCCTTHHHHHHH
T ss_pred -CCCeEEEEEEeccCCC-CCCccHH---HHHHHHHHHHHHHhhc-CCCeEEEEeccCCCCCcccc---ccchHHHHHHHH
Confidence 2367999999999742 1111111 1122223333344443 8999999999985431 01 113467777665
Q ss_pred HH
Q 014151 359 IV 360 (430)
Q Consensus 359 ~~ 360 (430)
.+
T Consensus 307 ~l 308 (386)
T 1odz_A 307 GL 308 (386)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=88.38 E-value=14 Score=39.51 Aligned_cols=161 Identities=13% Similarity=0.228 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc----cCCC--CCChHHHH-HHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ----ISPG--QFDERVFK-ALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~----~~pg--~~de~~l~-~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+++.+.+.++.|+++|++.|=+ .+ +|..-. ..-| ..|++.|- .+..+++.++++||++.+-+...--.
T Consensus 347 ~~ee~v~~~ad~~~~~G~~~~vi---DD-GW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~GlW~~P~~v~ 422 (732)
T 2xn2_A 347 FNEDKLKTIVDKAKKLGLEMFVL---DD-GWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMIS 422 (732)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEE---CS-SSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEEEEECTTEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEE---cC-cccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEEEEeCccccC
Confidence 47899999999999999986655 33 253110 0112 22333343 38899999999999998854321000
Q ss_pred CCC--cchhhhhhhhh-CCCCCCCCCC---CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCC---CCC
Q 014151 147 YGG--KTQYVNWAWEE-GIGISSSNDS---FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINE---PRC 217 (430)
Q Consensus 147 ~gg--~~~y~~W~~~~-G~~~~~~~~~---f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NE---p~~ 217 (430)
... ...++.|.... |.+....... -+++|++++.+.+.+..++.. ..+.+++ ||-... +..
T Consensus 423 ~~S~l~~~hpdw~~~~~g~~~~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~-~GVD~~K---------~D~~~~~~~~~~ 492 (732)
T 2xn2_A 423 YESNLYKEHPDYLXHVPGRKPCPSRNQYVLELGRKEVRDNIFEQMVKILDS-KKIDYIK---------WDMNRSLSDIYE 492 (732)
T ss_dssp SSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTT-SCCCEEE---------ECCCCCCCSCCC
T ss_pred CCCHHHHhCchheecCCCCCCccCCceEEEcCCCHHHHHHHHHHHHHHHHH-cCCCEEE---------ECCCccccccCC
Confidence 000 01234554321 1111001111 157899999999988888876 1222222 443321 111
Q ss_pred CCCC---ChHHHHHHHH---HHHHHHHhcCCCCEEEE
Q 014151 218 MSDP---SGDTLQDWID---EMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 218 ~~~~---~~~~~~~w~~---~~~~~Ir~~dp~~lV~~ 248 (430)
...+ ..+.+.++.+ ++.+.|++..|+.++..
T Consensus 493 ~~~~~~~~~~~~~~y~~~~y~~~~~l~~~~p~i~~~~ 529 (732)
T 2xn2_A 493 SDLPADQQGEAYHRYVLGYYDLLNKLVTRYPDILFEG 529 (732)
T ss_dssp TTSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1100 1123444432 45567888888877765
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.37 E-value=0.63 Score=47.21 Aligned_cols=65 Identities=17% Similarity=0.211 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---CC---------CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---GG---------YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g~---------~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+-.-+.+.|+.++++|+|+|=+-...+ +. |.. ..+.| .| -..+.|.+++++|+++||+||++
T Consensus 41 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~-~~--Gt~~df~~lv~~~H~~Gi~VilD 117 (484)
T 2aaa_A 41 SWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNS-NF--GTADNLKSLSDALHARGMYLMVD 117 (484)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEE
Confidence 567778889999999999999843221 10 100 01111 11 12578999999999999999998
Q ss_pred ccC
Q 014151 140 LVN 142 (430)
Q Consensus 140 l~~ 142 (430)
+.-
T Consensus 118 ~V~ 120 (484)
T 2aaa_A 118 VVP 120 (484)
T ss_dssp ECC
T ss_pred ECc
Confidence 753
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.20 E-value=0.62 Score=48.46 Aligned_cols=66 Identities=20% Similarity=0.307 Sum_probs=44.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+++|=+-.+.+ . +|... ...| .| -..+.|+++|++|+++||+||+++.-
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp-~~--Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMK-EY--GTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3567778889999999999999843221 0 11100 0111 11 13678999999999999999999753
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=87.98 E-value=0.54 Score=48.57 Aligned_cols=163 Identities=16% Similarity=0.202 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.+ . +|.. ....| .| -..+.|++++++|+++||+||+++.-+
T Consensus 28 Gdl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp-~~--Gt~~df~~lv~~~h~~Gi~VilD~V~N-- 102 (543)
T 2zic_A 28 GDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIAD-IF--GNMADMDNLLTQAKMRGIKIIMDLVVN-- 102 (543)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECG-GG--CCHHHHHHHHHHHHTTTCEEEEEECCS--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEecC--
Confidence 3567778889999999999999843221 0 1110 01111 11 136789999999999999999997532
Q ss_pred cCCC------------cchhhhhhhhhCCCC------C-------------------CCCCC-CCCCHHHHHHHHHHHHH
Q 014151 146 AYGG------------KTQYVNWAWEEGIGI------S-------------------SSNDS-FFFDPSIHKYFKHYVKT 187 (430)
Q Consensus 146 ~~gg------------~~~y~~W~~~~G~~~------~-------------------~~~~~-f~~d~~~~~~~~~~~~~ 187 (430)
..+. ...|..|..-...+. + ....+ =+.+|++++.+.+.++.
T Consensus 103 H~s~~~~~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~ 182 (543)
T 2zic_A 103 HTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNF 182 (543)
T ss_dssp BCCTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHH
T ss_pred cccccchhhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHH
Confidence 1111 111223321000000 0 00111 16789999999999999
Q ss_pred HHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 188 VLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 188 lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
.++. .+.|.++---..|.- ..++|.+. +.+....+++++.+.+++ .|+ .+++|.
T Consensus 183 Wl~~--GvDGfRlDa~~~i~~--~~~~~~~~---~~~~~~~~~~~~~~~v~~-~~~-~~~vgE 236 (543)
T 2zic_A 183 WIDK--GIGGFRMDVIDMIGK--IPAQHIVS---NGPKLHAYLKEMNAASFG-QHD-LLTVGE 236 (543)
T ss_dssp HHTT--TCCEEEETTGGGTTC--BGGGTBCS---SCTTHHHHHHHHHHHTGG-GSC-CEEEEE
T ss_pred HHhc--CCCEEEECCccceee--cCCCcccc---ccHHHHHHHHHHHHHHhc-cCC-eEEEee
Confidence 8874 455554422122211 22333221 223467888888888887 564 556664
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=87.96 E-value=1 Score=47.82 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC----CC-----CccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG----GY-----NSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~-----~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+..-+.+.|+.++++|+++|-+-.+... +| ..+.+.-| ..+.|++++++|+++||+||+++.
T Consensus 57 G~~~g~~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~G-----t~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 57 GDLNGVTQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLG-----TESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp CCHHHHHTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTC-----CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccC-----CHHHHHHHHHHHHHcCCEEEEEEC
Confidence 45677888899999999999998443221 11 11111112 367899999999999999999875
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=87.85 E-value=0.64 Score=48.78 Aligned_cols=111 Identities=14% Similarity=0.257 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC----C--CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND----G--GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~----g--~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
+..-+.+.|+.++++|+|+|=+-.+.+ . +|.. ..+.| .| ...+.|+++|++|+++||+||+++.-+
T Consensus 142 ~~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~-~~--Gt~~d~~~lv~~~H~~Gi~VilD~V~N-- 216 (602)
T 2bhu_A 142 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PY--GRPEDLMALVDAAHRLGLGVFLDVVYN-- 216 (602)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECCS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCc-CC--CCHHHHHHHHHHHHHCCCEEEEEeccc--
Confidence 566677889999999999999844321 1 1111 01111 11 136789999999999999999997532
Q ss_pred cCCCc----chh-hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 146 AYGGK----TQY-VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 146 ~~gg~----~~y-~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
..+.. ..| +.|.... ....-...-=|.+|++++.+.+.++..++.
T Consensus 217 H~~~~~~~~~~~~~~~~~~~-~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~ 266 (602)
T 2bhu_A 217 HFGPSGNYLSSYAPSYFTDR-FSSAWGMGLDYAEPHMRRYVTGNARMWLRD 266 (602)
T ss_dssp CCCSSSCCHHHHCGGGEEEE-EECSSSEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCccccccCcccccCC-CCCCCCCCccCCCHHHHHHHHHHHHHHHHH
Confidence 12211 111 1121100 000000001156799999999988888864
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=87.81 E-value=0.99 Score=45.75 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C---CCCccc-cCCCC------CCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G---GYNSLQ-ISPGQ------FDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g---~~~~~~-~~pg~------~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+..-+.+.|+.++++|+|+|=+-...+ + +|...- ..++. .|+ -..+.|+++|++|+++||+||++
T Consensus 23 ~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 102 (485)
T 1wpc_A 23 HWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGD 102 (485)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 466777889999999999999844321 1 111000 01111 111 13678999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 103 ~V 104 (485)
T 1wpc_A 103 VV 104 (485)
T ss_dssp EC
T ss_pred Ee
Confidence 75
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=87.46 E-value=0.76 Score=46.48 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C------C---CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G------G---YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g------~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+-..+.+.|+.++++|+|+|=+-...+ + . |.. ....| .| -..+.|.+++++|+++||+||++
T Consensus 41 ~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp-~~--Gt~~df~~lv~~~H~~Gi~VilD 117 (478)
T 2guy_A 41 TWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNE-NY--GTADDLKALSSALHERGMYLMVD 117 (478)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECT-TS--CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCc-cC--CCHHHHHHHHHHHHHCCCEEEEE
Confidence 567788889999999999999843221 0 0 100 01111 11 12678999999999999999998
Q ss_pred ccC
Q 014151 140 LVN 142 (430)
Q Consensus 140 l~~ 142 (430)
+.-
T Consensus 118 ~V~ 120 (478)
T 2guy_A 118 VVA 120 (478)
T ss_dssp ECC
T ss_pred ECc
Confidence 753
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=87.44 E-value=0.88 Score=47.53 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.+ . +|... ...| .| -..+.|+++|++|+++||+||+++.-
T Consensus 37 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~-~~--Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 37 GDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWP-TY--GTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCccccccccc-cc--CCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3567778889999999999999843211 0 11110 1111 11 13678999999999999999999753
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=87.34 E-value=0.84 Score=47.24 Aligned_cols=66 Identities=18% Similarity=0.339 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+|+|=+-.+.. . +|... ...| .| -..+.|.+++++|+++||+||+++.-
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~-~~--Gt~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMD-EF--GTMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3567788889999999999999843211 0 11100 1111 01 13678999999999999999998753
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=87.33 E-value=1.3 Score=46.63 Aligned_cols=164 Identities=12% Similarity=0.117 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+-.-+.+.++.++++|+|+|=+-.+.+ + +|.. ....| .| -..+.|++++++|+++||+||+++.-+
T Consensus 111 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp-~~--Gt~~d~~~Lv~~ah~~GI~VilD~V~NH 187 (628)
T 1g5a_A 111 DLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNP-AL--GTIGDLREVIAALHEAGISAVVDFIFNH 187 (628)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCT-TT--CCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCc-cC--CCHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 456677788999999999999844322 1 1110 01111 11 136789999999999999999997532
Q ss_pred ------ccc--CCCcchhhhhhhhh-----------------CCC-CC-----C-CC-----------CCCCCCHHHHHH
Q 014151 144 ------LQA--YGGKTQYVNWAWEE-----------------GIG-IS-----S-SN-----------DSFFFDPSIHKY 180 (430)
Q Consensus 144 ------w~~--~gg~~~y~~W~~~~-----------------G~~-~~-----~-~~-----------~~f~~d~~~~~~ 180 (430)
|-. ..|.+.|..|..-. +.. .. . .. .-=+.+|++++.
T Consensus 188 ~s~~~~wf~~~~~g~~~y~d~y~~~~~~~~P~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V~~~ 267 (628)
T 1g5a_A 188 TSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRA 267 (628)
T ss_dssp EETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSSSTTEEEBCTTSHHHHHH
T ss_pred ccccchhHHHHhcCCCccccccccCCCCCCcccccccccccCCCCCCCccccCCCCCEEeccCCCCCCccCCCCHHHHHH
Confidence 110 01111233322100 000 00 0 00 011568999999
Q ss_pred HHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 181 FKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 181 ~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+.+.++..++. .+.|.++---+.| ..++... +.+.+....+++++.+.+++..|+.+ ++|.
T Consensus 268 i~~~l~~w~~~--GvDGfRlDa~~~i-----~k~~g~~-~~~~p~~~~~~~~~r~~~~~~~p~~~-~igE 328 (628)
T 1g5a_A 268 MAGEMLFLANL--GVDILRMDAVAFI-----WKQMGTS-CENLPQAHALIRAFNAVMRIAAPAVF-FKSE 328 (628)
T ss_dssp HHHHHHHHHTT--TCSEEEETTGGGS-----CCCTTSC-SSSCHHHHHHHHHHHHHHHHHCTTCE-EEEC
T ss_pred HHHHHHHHHHc--CCCEEEEeccccc-----ccccCcc-ccCcHHHHHHHHHHHHHHHHhCCCeE-EEEE
Confidence 99999998864 4555444221222 1222111 11224456788888888998888754 4553
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=87.18 E-value=3.9 Score=41.23 Aligned_cols=135 Identities=12% Similarity=0.082 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHcCCCEEEEccc-cCC--CCCccccCCCCCCh----HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAF-NDG--GYNSLQISPGQFDE----RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK 150 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~-~~g--~~~~~~~~pg~~de----~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~ 150 (430)
..++..+.+|++|++.|=+-.- -|| -|+.-.. .++. ...+-+.+++++|+++||++-+.+...++.+ .
T Consensus 106 Dp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t---~~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S~~~dW~--~ 180 (455)
T 2zxd_A 106 DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT---DFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWR--F 180 (455)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC---SCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCGG--G
T ss_pred CHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCC---CCcccccCCCCChHHHHHHHHHHcCCeEEEEecCCcccc--C
Confidence 3466777899999998776331 122 1221111 1110 1236788999999999999999776222111 0
Q ss_pred chhh-hhhhhhCCCCCCCCCCCCC----CHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHH
Q 014151 151 TQYV-NWAWEEGIGISSSNDSFFF----DPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDT 225 (430)
Q Consensus 151 ~~y~-~W~~~~G~~~~~~~~~f~~----d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~ 225 (430)
+ .|. ....+.|. ++.+.+.+...+++|+++ |+ |.++=+|..- |.. ..
T Consensus 181 ---p~~~~--------~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~--------Y~--pd~lWfDg~~-~~~------~~ 232 (455)
T 2zxd_A 181 ---TTEPI--------RYPEDLSYIRPNTYEYADYAYKQVMELVDL--------YL--PDVLWNDMGW-PEK------GK 232 (455)
T ss_dssp ---CCSCC--------CSGGGGGTCSCCSHHHHHHHHHHHHHHHHH--------HC--CSEEEEESCC-CGG------GT
T ss_pred ---ccccc--------ccccccccCCCccHHHHHHHHHHHHHHHhh--------cC--CcEEEECCCC-Ccc------ch
Confidence 1 010 00011122 578899999999999999 95 5666455321 211 10
Q ss_pred HHHHHHHHHHHHHhcCCCCEEE
Q 014151 226 LQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 226 ~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
--..++.+.+++..|+.+|.
T Consensus 233 --w~~~~~~~~~~~~~P~~vvn 252 (455)
T 2zxd_A 233 --EDLKYLFAYYYNKHPEGSVN 252 (455)
T ss_dssp --THHHHHHHHHHHHCTTCCBC
T ss_pred --hhHHHHHHHHHHhCCCEEEE
Confidence 01356677788889976664
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=87.07 E-value=0.68 Score=47.99 Aligned_cols=66 Identities=18% Similarity=0.287 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.++++|+++|=+-.+.+ . +|... ...| .| -..+.|++++++|+++||+||+++.-
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~-~~--Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMN-EF--GTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3566777889999999999999843211 0 11100 0111 11 13678999999999999999999753
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=87.00 E-value=0.67 Score=49.35 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----------C---CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----------G---YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----------~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
+-.-+.+.|+.++++|+++|=+-.+.+. . |.. ....| .| -..+.|++++++|+++||+||+
T Consensus 50 dl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp-~~--Gt~~df~~Lv~~aH~~GikVil 126 (686)
T 1qho_A 50 DLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HF--GNWTTFDTLVNDAHQNGIKVIV 126 (686)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCc-cc--CCHHHHHHHHHHHHHCCCEEEE
Confidence 5677888899999999999998443210 0 100 00111 11 1367899999999999999999
Q ss_pred ecc
Q 014151 139 SLV 141 (430)
Q Consensus 139 ~l~ 141 (430)
++.
T Consensus 127 D~V 129 (686)
T 1qho_A 127 DFV 129 (686)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=86.96 E-value=1.3 Score=46.77 Aligned_cols=167 Identities=11% Similarity=0.132 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C-CCCccccCC-CCCCh--HHHHHHHHHHHHHHHcCCEEEEeccCC----
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G-GYNSLQISP-GQFDE--RVFKALDHVIVEARKNGVRLLLSLVNN---- 143 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g-~~~~~~~~p-g~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~~---- 143 (430)
+..-+.+.|+.++++|+|+|=+-.+.+ + .+..+.+.. -..++ -..+.|.+++++|+++||+||+++.-+
T Consensus 104 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~NH~s~ 183 (644)
T 3czg_A 104 TLQGVAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHTAD 183 (644)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEEET
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCCccc
Confidence 456677788999999999999844321 1 000011000 00111 136789999999999999999997532
Q ss_pred ---ccc--CCCcchhhhhhhhh-----------------CC----CCC--CC-C------------CCCCCCHHHHHHHH
Q 014151 144 ---LQA--YGGKTQYVNWAWEE-----------------GI----GIS--SS-N------------DSFFFDPSIHKYFK 182 (430)
Q Consensus 144 ---w~~--~gg~~~y~~W~~~~-----------------G~----~~~--~~-~------------~~f~~d~~~~~~~~ 182 (430)
|-. ..|.+.|..|..-. +. ... .. . .-=|.+|++++.+.
T Consensus 184 ~~~wf~~~~~~~~~y~d~y~~~~~~~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V~~~i~ 263 (644)
T 3czg_A 184 DHAWAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMA 263 (644)
T ss_dssp TSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHHHCCCC------CCEEEETTTTEEEECSSSTTEEEBCTTSHHHHHHHH
T ss_pred chhhHHHHhcCCCcccCceecCCCCCCCcchhhcccccCCCCCCCCccccCCCCceEecccccCCCcCCCCCHHHHHHHH
Confidence 100 00111222221100 00 000 00 0 11157899999999
Q ss_pred HHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 183 HYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 183 ~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+.++..++. .+.|.++-.-..| ..++.. .+.+.+....+++++.+.+++..|+.. ++|.
T Consensus 264 ~~~~~wl~~--GvDGfRlDa~~~i-----~~~~~~-~~~n~p~~~~~l~~~r~~~~~~~p~~~-ligE 322 (644)
T 3czg_A 264 LAMLRLANL--GVEAFRLDSTAYL-----WKRIGT-DCMNQSEAHTLLVALRAVTDIVAPAVV-MKAE 322 (644)
T ss_dssp HHHHHHHHT--TEEEEEEETGGGS-----CCCTTS-CSSSCHHHHHHHHHHHHHHHHHCTTCE-EEEE
T ss_pred HHHHHHHHc--CCCEEEEeccccc-----ccccCC-cccCcHHHHHHHHHHHHHHHHhCCCeE-EEEE
Confidence 999998864 3344333111111 112211 111224456788899889999888754 4553
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=86.88 E-value=3.4 Score=45.16 Aligned_cols=160 Identities=10% Similarity=0.097 Sum_probs=99.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccc--------------cC--------C----CCCccc-------cCCCCCChHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAF--------------ND--------G----GYNSLQ-------ISPGQFDERVFK 120 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~--------------~~--------g----~~~~~~-------~~pg~~de~~l~ 120 (430)
++-++|++.|+.|+=.|+|..=.+.- ++ | .|..+. |-|-.+-+..++
T Consensus 308 WdW~rWEreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~ 387 (914)
T 4a4a_A 308 WDWDQYEEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAE 387 (914)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHH
T ss_pred cChHHHHHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHH
Confidence 47889999999999999998765431 10 0 011111 122233345555
Q ss_pred HHHHHHHHHHHcCCEEEEeccCCcccCCCc-chhh--------hhhhhhCCCCCCCC-CCCC---CCHHHHHHHHHHHHH
Q 014151 121 ALDHVIVEARKNGVRLLLSLVNNLQAYGGK-TQYV--------NWAWEEGIGISSSN-DSFF---FDPSIHKYFKHYVKT 187 (430)
Q Consensus 121 ~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~-~~y~--------~W~~~~G~~~~~~~-~~f~---~d~~~~~~~~~~~~~ 187 (430)
.=.++++..++.||..||+-+..- .+.+. ..|| .|. |-+. ... ..|+ +||-..+.-+.|+++
T Consensus 388 Lq~kIl~RmrelGM~PVLPaF~G~-VP~~~~~~~P~a~i~~~~~W~---gf~~-~~~~~~~~l~p~dplF~~i~~~F~~~ 462 (914)
T 4a4a_A 388 LGRKMHDRMQSFGINPVLQGYSGM-VPRDFKEKNQEAQTISQGGWC---GFDR-PDMLKTYVNEGEADYFQKVADVFYEK 462 (914)
T ss_dssp HHHHHHHHHHHHTCEEEEECCSCE-ECTTHHHHSTTCCEECCCEET---TEEC-CEEECSSCCTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeecCCCcCCC-CChHHHhhCCCCeeecCCCCC---CCCC-chhcccccCCCCChHHHHHHHHHHHH
Confidence 566999999999999999754310 00110 1111 232 1000 000 1122 467788888889999
Q ss_pred HHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCE-EEEc
Q 014151 188 VLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHL-VTVG 249 (430)
Q Consensus 188 lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~l-V~~G 249 (430)
..+. |++...+.+-|..||-..... ..+.+-.+.+.+.+++.||+.. |+.|
T Consensus 463 q~~~--------yG~~~h~Y~~D~FnE~~~~~~---~~l~~~~~~v~~am~~~dp~AvWv~Qg 514 (914)
T 4a4a_A 463 QKEV--------FGDVTNFYGVDPFHQGGNTGD---LDNGKIYEIIQNKMIEHDNDAVWVIQN 514 (914)
T ss_dssp HHHH--------HCSCCSEEECCTTTTSCCCTT---CCHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHH--------hCCcccccccCccccCCCCCC---cCHHHHHHHHHHHHHHhCCCCEEEEcc
Confidence 8888 998778999999999643222 2255666778888899999864 6554
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=86.69 E-value=0.87 Score=45.35 Aligned_cols=66 Identities=17% Similarity=0.248 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcccc---CCC---------CCccccCCCCC---Ch--HHHHHHHHHHHHHHHcCCEEE
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFN---DGG---------YNSLQISPGQF---DE--RVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~---~g~---------~~~~~~~pg~~---de--~~l~~lD~~l~~A~~~Gi~vi 137 (430)
+-..+.+.++.++++|+|+|=+-... .+. +-..++ ..| ++ -..+.|.+++++|+++||+||
T Consensus 15 ~~~~i~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~--~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~Vi 92 (422)
T 1ua7_A 15 SFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQP--TSYQIGNRYLGTEQEFKEMCAAAEEYGIKVI 92 (422)
T ss_dssp CHHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCE--EEEEEEETTTEEHHHHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccc--eeeeccCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 45667788999999999999874421 110 000111 001 11 246789999999999999999
Q ss_pred EeccC
Q 014151 138 LSLVN 142 (430)
Q Consensus 138 l~l~~ 142 (430)
+++.-
T Consensus 93 lD~V~ 97 (422)
T 1ua7_A 93 VDAVI 97 (422)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 98753
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=86.27 E-value=1 Score=46.75 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC----CC--CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC-C
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND----GG--YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN-N 143 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~----g~--~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~-~ 143 (430)
.+...+.+.|+.++++|+|+|-+-...+ .. |.+ ..+.| .| -..+.|.++|++|+++||+||+++.- +
T Consensus 116 G~~~~~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~--Gt~~d~~~lv~~~h~~Gi~VilD~V~NH 192 (558)
T 3vgf_A 116 GTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SY--GGPEGFRKLVDEAHKKGLGVILDVVYNH 192 (558)
T ss_dssp CSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GG--THHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCcccCCCCCCcCccccccccccc-cc--CCHHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 3567788889999999999999854321 01 111 01111 11 13678999999999999999998743 2
Q ss_pred cccCC-CcchhhhhhhhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHhc
Q 014151 144 LQAYG-GKTQYVNWAWEEGIGISSSNDSF--FFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 144 w~~~g-g~~~y~~W~~~~G~~~~~~~~~f--~~d~~~~~~~~~~~~~lv~R 191 (430)
-..-+ ....+..|....-...-....+| +.+|++++.+.+.++..++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~ 243 (558)
T 3vgf_A 193 VGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKE 243 (558)
T ss_dssp CCSSSCCGGGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 11000 01111112110000000000111 23578899999999888864
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=86.12 E-value=0.92 Score=47.73 Aligned_cols=154 Identities=14% Similarity=0.169 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC----CC--CCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND----GG--YNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~----g~--~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
+...+.+.|+.++++|+|+|-+-...+ .. |... .+.| .|. ..+.|.++|++|+++||+||+++.-+
T Consensus 152 ~~~~~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~G--~~~~~~~lv~~~H~~Gi~VilD~V~N-- 226 (618)
T 3m07_A 152 TFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHS-AYG--TPDDFKAFIDAAHGYGLSVVLDIVLN-- 226 (618)
T ss_dssp SHHHHHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECT-TTC--CHHHHHHHHHHHHHTTCEEEEEECCS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCc-CcC--CHHHHHHHHHHHHHCCCEEEEeecCc--
Confidence 566777889999999999999854321 01 1110 1111 121 25788999999999999999987532
Q ss_pred cCCCc----chh-hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC
Q 014151 146 AYGGK----TQY-VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD 220 (430)
Q Consensus 146 ~~gg~----~~y-~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~ 220 (430)
..|.. ..| +.|........ -...--+.+|++++.+.+.++..++. -.+.|.++-.-.. +.++.
T Consensus 227 H~~~~~~~~~~~~~~~~~~~~~~~-wg~~ln~~~p~V~~~i~~~~~~w~~~-~gvDGfR~D~~~~-----~~~~~----- 294 (618)
T 3m07_A 227 HFGPEGNYLPLLAPAFFHKERMTP-WGNGIAYDVDAVRRYIIEAPLYWLTE-YHLDGLRFDAIDQ-----IEDSS----- 294 (618)
T ss_dssp CCCSSSCCHHHHCGGGEEEEEEET-TEEEECTTSHHHHHHHHHHHHHHHHH-TTCSEEEETTGGG-----CCCCS-----
T ss_pred cCCCCcccccccCchhhcCCCCCC-CCCCcCCCCHHHHHHHHHHHHHHHHH-hCccEEEecchhh-----hcccc-----
Confidence 12211 111 11211000000 00011156799999999999998865 1222322211011 11211
Q ss_pred CChHHHHHHHHHHHHHHHhcCCC-CEEEEcc
Q 014151 221 PSGDTLQDWIDEMSAFVKSIDKK-HLVTVGL 250 (430)
Q Consensus 221 ~~~~~~~~w~~~~~~~Ir~~dp~-~lV~~G~ 250 (430)
-..+++++.+.||+..|+ ..+.+|.
T Consensus 295 -----~~~f~~~l~~~v~~~~p~~~~~li~E 320 (618)
T 3m07_A 295 -----ARHVLVEIAQRIREDITDRPIHLTTE 320 (618)
T ss_dssp -----SSCHHHHHHHHHHHHCCSSCCEEEEC
T ss_pred -----hHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 123567777888888885 4566664
|
| >4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=85.64 E-value=23 Score=33.07 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
..+..+-.-|..|++.|+||+|++=. |. .|. |.. ...--.+++.++.|.+-+..+++.
T Consensus 59 ~~~~~l~~~i~~~q~~g~KvllsiGG-~~-~g~---~~~------------~~~~~~~~~~~~~f~~~~~~~~~~----- 116 (283)
T 4ac1_X 59 PHFYTLWNETITMKQAGVKVMGMVGG-AA-PGS---FNT------------QTLDSPDSATFEHYYGQLRDAIVN----- 116 (283)
T ss_dssp GGGHHHHHHHHHHHHTTCEEEEEEET-TS-SCS---SST------------TTTTCSSHHHHHHHHHHHHHHHHH-----
T ss_pred hHHHHHHHHHHHHHcCCCEEEEEEcC-CC-CCC---Ccc------------cccccccHHHHHHHHHHHHHHHHH-----
Confidence 34555656688999999999998732 31 010 000 000012344455555555555555
Q ss_pred cccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+ +-++++--|-.. +.+.+...++++.+ +.+++-+||...
T Consensus 117 ---~~----~dG~D~d~e~~~----~~~~~~~li~~Lr~---~~g~~~~lT~Ap 156 (283)
T 4ac1_X 117 ---FQ----LEGMDLDVEQPM----SQQGIDRLIARLRA---DFGPDFLITLAP 156 (283)
T ss_dssp ---TT----CSEEEEECCSCB----CHHHHHHHHHHHHH---HHCTTSEEEECC
T ss_pred ---cC----CCceEeecccCC----CHHHHHHHHHHHHH---HcCCCceEEEcc
Confidence 43 557777766332 22344444444332 256777888754
|
| >3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A* | Back alignment and structure |
|---|
Probab=85.54 E-value=34 Score=34.91 Aligned_cols=151 Identities=13% Similarity=0.187 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------cccc---------CC-CCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQI---------SP-GQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~~---------~p-g~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
.+.+.+.+.++.|+..++|++-++.-.+-+|+ .+.. .+ |.|. -+.+.++++.|+++||.|
T Consensus 196 ~~~~~ik~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~~~~~~~~g~YT---~~di~eIv~YA~~rgI~V 272 (525)
T 3gh5_A 196 FTVDEVKRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYT---QEQFKDIVSYAAERYIEV 272 (525)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBC---HHHHHHHHHHHHTTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCccccCCCCCCCcC---HHHHHHHHHHHHHcCCEE
Confidence 46889999999999999999998764443342 2211 12 3455 456789999999999999
Q ss_pred EEeccCCcccCCCcc----hhhhhhhhhCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 137 LLSLVNNLQAYGGKT----QYVNWAWEEGIGIS-------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 137 il~l~~~w~~~gg~~----~y~~W~~~~G~~~~-------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
|+.+.. +|-.. .|+...+ .+.... ....-.-.++++.+..++.+++++.- +. .+.
T Consensus 273 IPEID~----PGH~~a~l~~yp~L~~-~~~~~~~~~~~~~~~~~l~~~~~~ty~fl~~vl~Ev~~l--------Fp-~~~ 338 (525)
T 3gh5_A 273 IPEIDM----PGHTNAALASYGELNP-DGKRKAMRTDTAVGYSTLMPRAEITYQFVEDVISELAAI--------SP-SPY 338 (525)
T ss_dssp EEECCC----SSSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHH--------CC-SSE
T ss_pred EEEecc----cchHHHHHHhChhhcc-CCCCCcccccCCCCCcccCCCChhHHHHHHHHHHHHHHh--------CC-CCE
Confidence 997632 22111 1222111 111000 00111235788888888999998876 42 122
Q ss_pred eeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEE
Q 014151 206 IFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 206 I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
| -+ +-|.... ..+.+..|++++.+.+++... .++.-
T Consensus 339 i---HiGgDE~~~~---~~~~~~~F~~~v~~~l~~~Gk-~~i~W 375 (525)
T 3gh5_A 339 I---HLGGDESNAT---SAADYDYFFGRVTAIANSYGK-KVVGW 375 (525)
T ss_dssp E---ECCCCCCTTS---CHHHHHHHHHHHHHHHHHTTC-EEEEE
T ss_pred E---EEcCcCCCCC---CHHHHHHHHHHHHHHHHHCCC-EEEEE
Confidence 1 22 2222211 246678899999999988653 44443
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=85.36 E-value=1.9 Score=46.04 Aligned_cols=149 Identities=12% Similarity=0.238 Sum_probs=81.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC--------------------C--CC--Cc---cccCCCCCCh------HHHHH
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND--------------------G--GY--NS---LQISPGQFDE------RVFKA 121 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~--------------------g--~~--~~---~~~~pg~~de------~~l~~ 121 (430)
+..-+.+.|+.++++|+|+|=+-...+ + .| .+ +.+. +.|.. ...+.
T Consensus 178 t~~gi~~~L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~~~~~~wGY~~~~~~a~~-~~yg~~~~~~~~~~~e 256 (714)
T 2ya0_A 178 TFEAFIEKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLT-GMYSSDPKNPEKRIAE 256 (714)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBSCSSSBC-STTSSCTTSTTHHHHH
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccccccCcccccccccccccCcCcCccCCCCccCcccC-hhhccCCCCccchHHH
Confidence 456677779999999999999843221 0 01 11 1111 12221 23788
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcch----hhhhhh---hhCCCCC-CCCCCC-CCCHHHHHHHHHHHHHHHhcc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ----YVNWAW---EEGIGIS-SSNDSF-FFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~----y~~W~~---~~G~~~~-~~~~~f-~~d~~~~~~~~~~~~~lv~R~ 192 (430)
|.++|++|+++||+||+++.-+ ..+.... .+.|.. ..|.... .....+ +.++.+++.+.+.++..++.
T Consensus 257 fk~lV~~~H~~Gi~VilDvV~N--H~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e- 333 (714)
T 2ya0_A 257 FKNLINEIHKRGMGAILDVVYN--HTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT- 333 (714)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT--BCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCEEEEEeccC--cccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999987532 1221100 112221 0111000 000011 34688899988888888875
Q ss_pred CCcccccccCCCceeEE--eecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 193 NTITGVEYRNDPTIFAW--ELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~w--el~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+ |-+| ++..+. .. .+++++...+++.+|+.. ++|
T Consensus 334 -------~~----vDGfR~D~~~~~------~~----~~~~~~~~~~~~~~p~~~-lig 370 (714)
T 2ya0_A 334 -------YK----VDGFRFDMMGDH------DA----ASIEEAYKAARALNPNLI-MLG 370 (714)
T ss_dssp -------HC----CCEEEETTGGGS------BH----HHHHHHHHHHHHHCTTCE-EEE
T ss_pred -------hC----ceEEEEeCCCCC------CH----HHHHHHHHHHHHhCCCeE-EEe
Confidence 42 2222 333211 11 234556667788899754 455
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=84.97 E-value=1.4 Score=46.23 Aligned_cols=66 Identities=18% Similarity=0.233 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccC---C----CCCccc-cCC------CCCCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFND---G----GYNSLQ-ISP------GQFDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~---g----~~~~~~-~~p------g~~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
-..+.+.|+.++++|+++|=+-...+ + +|...- ..+ |..|+ -..+.|++++++|+++||+||++
T Consensus 149 ~~gi~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD 228 (599)
T 3bc9_A 149 WNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFD 228 (599)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 45577889999999999998743221 0 111000 001 11222 23678999999999999999998
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 229 ~V 230 (599)
T 3bc9_A 229 AV 230 (599)
T ss_dssp EC
T ss_pred EC
Confidence 75
|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
Probab=84.80 E-value=2.7 Score=44.89 Aligned_cols=64 Identities=13% Similarity=0.123 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccC-----CCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFND-----GGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~-----g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+++.+.+.+.++.|+..++|++-++.-.+ ..|+ ..|.+...+.+.++++.|+++||.||+.++.
T Consensus 140 ~~s~~~ik~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr------~~yP~lt~~ei~elv~yA~~rgI~vvpeI~P 208 (716)
T 2cho_A 140 PWSHQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWR------LPYPDKEAAQLQELVAVANENEVDFVWAIHP 208 (716)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECCTTCTTTSTTGGG------SCCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeeccCccccccccc------ccCChhhHHHHHHHHHHHHHcCCEEEEeecc
Confidence 35789999999999999999998765333 1232 2355556788999999999999999998753
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=84.80 E-value=0.91 Score=49.49 Aligned_cols=25 Identities=12% Similarity=0.335 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
..++.++++|++|+++||+||+++.
T Consensus 376 ~~~~efk~LV~~aH~~GIkVIlDvV 400 (884)
T 4aio_A 376 SRIIEYRQMVQALNRIGLRVVMDVV 400 (884)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHHHHHHHHhcCCceeeeec
Confidence 4577899999999999999999975
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=84.46 E-value=0.71 Score=46.72 Aligned_cols=66 Identities=12% Similarity=0.050 Sum_probs=41.4
Q ss_pred HHHHHHH-HHHHHHcCCCEEEEccccCC------CC-CccccCCCCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 76 RARVGAM-LQAGAKMGLTVCRTWAFNDG------GY-NSLQISPGQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 76 ~~~~~~~-~~~~~~~G~n~vR~~~~~~g------~~-~~~~~~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
-.-+.+. ++.++++|+++|=+-...+. .| ....+..=..|+ -..+.|.+++++|+++||+||+++.
T Consensus 21 ~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 21 WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3445554 69999999999987432210 00 111111101111 2367899999999999999999874
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=84.43 E-value=1.9 Score=45.94 Aligned_cols=65 Identities=15% Similarity=0.109 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcccc---CCCCCcc------ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFN---DGGYNSL------QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~---~g~~~~~------~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+-..+.+.++.++++|+++|=+-... .+.+..+ ...| .| -..+.|.+++++|+++||+||+++.-
T Consensus 15 tf~gi~~~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv~Dy~~Idp-~l--Gt~edfk~LV~aaH~~GIkVIlDvV~ 88 (720)
T 1iv8_A 15 NFGDVIDNLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRIND-EL--GGEKEYRRLIETAHTIGLGIIQDIVP 88 (720)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECT-TT--THHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHhCCCCEEEECCcccCCCCCCCCCCCccCCCcCc-cC--CCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 56777888999999999999884321 1111111 1111 11 24678999999999999999999764
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=84.31 E-value=0.91 Score=48.33 Aligned_cols=64 Identities=14% Similarity=0.292 Sum_probs=44.2
Q ss_pred CHHHHHHHHH--HHHHcCCCEEEEccccC---------C-------CCCc---cccCCCCCChHHHHHHHHHHHHHHHcC
Q 014151 75 SRARVGAMLQ--AGAKMGLTVCRTWAFND---------G-------GYNS---LQISPGQFDERVFKALDHVIVEARKNG 133 (430)
Q Consensus 75 ~~~~~~~~~~--~~~~~G~n~vR~~~~~~---------g-------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~G 133 (430)
+-.-+.+.|+ .++++|+++|=+-...+ | +|.. ....| .| -..+.|++++++|+++|
T Consensus 53 dl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp-~~--Gt~~dfk~Lv~~aH~~G 129 (686)
T 1d3c_A 53 DWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNP-AY--GTIADFQNLIAAAHAKN 129 (686)
T ss_dssp CHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCc-cc--CCHHHHHHHHHHHHHCC
Confidence 5677888899 99999999999844211 0 0100 01111 11 13778999999999999
Q ss_pred CEEEEecc
Q 014151 134 VRLLLSLV 141 (430)
Q Consensus 134 i~vil~l~ 141 (430)
|+||+++.
T Consensus 130 I~VilD~V 137 (686)
T 1d3c_A 130 IKVIIDFA 137 (686)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEeC
Confidence 99999875
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=84.21 E-value=0.9 Score=47.90 Aligned_cols=66 Identities=12% Similarity=0.292 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-------CC----CCcc---ccCCCCCCh------HHHHHHHHHHHHHHHcCC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-------GG----YNSL---QISPGQFDE------RVFKALDHVIVEARKNGV 134 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-------g~----~~~~---~~~pg~~de------~~l~~lD~~l~~A~~~Gi 134 (430)
+..-+.+.|+.++++|+|+|-+-...+ +. |... .+.| .|.. ...+.|.++|++|+++||
T Consensus 118 ~~~g~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lv~~~H~~Gi 196 (637)
T 1gjw_A 118 TFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDE-RYHDPLLEPFKVDEEFKAFVEACHILGI 196 (637)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECG-GGSCGGGTTSCHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCc-ccCCCcccccchHHHHHHHHHHHHHCCC
Confidence 456678889999999999999844311 11 1110 1111 1211 126889999999999999
Q ss_pred EEEEecc
Q 014151 135 RLLLSLV 141 (430)
Q Consensus 135 ~vil~l~ 141 (430)
+||+++.
T Consensus 197 ~VilD~V 203 (637)
T 1gjw_A 197 RVILDFI 203 (637)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999975
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=84.08 E-value=4 Score=40.14 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+++.++++|+.|++.|++.+=+..+. ++. ...-+.++.++++|+++|+++.+++.
T Consensus 101 ~d~~v~~~h~~~Ak~aGIDgf~l~w~~----------~~~--~~d~~~l~~~l~aA~~~~~k~~f~~~ 156 (380)
T 4ad1_A 101 SDPNILTKHMDMFVMARTGVLALTWWN----------EQD--ETEAKRIGLILDAADKKKIKVCFHLE 156 (380)
T ss_dssp TCHHHHHHHHHHHHHHTEEEEEEEECC----------CCS--HHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecC----------CCC--cccHHHHHHHHHHHHHcCCeEEEEEC
Confidence 368999999999999999988773321 111 11115678899999999999976653
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=84.00 E-value=2 Score=42.33 Aligned_cols=54 Identities=11% Similarity=0.220 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.+++.++++|+.|++.|++.+=+-.+.. +.+.+ +.++.++++|+++|+++.+++
T Consensus 100 ~D~~v~~~hi~~ak~aGIDgfal~w~~~----------~~~~d---~~l~~~~~aA~~~g~k~~f~~ 153 (382)
T 4acy_A 100 NDPEIIRKHIRMHIKANVGVLSVTWWGE----------SDYGN---QSVSLLLDEAAKVGAKVCFHI 153 (382)
T ss_dssp TCHHHHHHHHHHHHHHTEEEEEEEECGG----------GGTTC---HHHHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCC----------CCchH---HHHHHHHHHHHHcCCEEEEEe
Confidence 3689999999999999999887622110 11212 467889999999999998665
|
| >3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* | Back alignment and structure |
|---|
Probab=83.81 E-value=11 Score=36.09 Aligned_cols=100 Identities=13% Similarity=0.204 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 120 KALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+.+-+.+..|+++|++|++.+-. |. + .....+++.++.|.+-+..++++
T Consensus 59 ~~~~~~i~~~k~~g~kvllsiGG-~~---------------~-------s~~~~~~~~r~~fi~si~~~~~~-------- 107 (333)
T 3n12_A 59 ADFKSDISYLKSKGKKVVLSIGG-QN---------------G-------VVLLPDNAAKDRFINSIQSLIDK-------- 107 (333)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEES-TT---------------C-------CCCCCSHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHhCCCeEEEEecC-CC---------------C-------ccccCCHHHHHHHHHHHHHHHHH--------
Confidence 34556788899999999998732 31 0 12356788999999888888888
Q ss_pred ccCCCceeEEeecCC--CC--CCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 200 YRNDPTIFAWELINE--PR--CMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 200 yk~~p~I~~wel~NE--p~--~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+=|--=+-||--.. +. ....++.+.+..+++++.+.+++..++-+||+..
T Consensus 108 ~gfDGiDiDwE~p~~~~~~d~~~~~~d~~~~~~ll~eLr~~l~~~g~~~~lT~Ap 162 (333)
T 3n12_A 108 YGFDGIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMAP 162 (333)
T ss_dssp HCCSEEEEECCTTCCBCTTCCCTTSCCCHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred cCCCeEEEeccCCCCCCCCCcCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence 654422223442110 00 0011234688899999999998888888888753
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=83.80 E-value=1.4 Score=47.47 Aligned_cols=114 Identities=11% Similarity=0.149 Sum_probs=63.0
Q ss_pred CHHHHH-HHHHHHHHcCCCEEEEccccC-C-----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARVG-AMLQAGAKMGLTVCRTWAFND-G-----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~~-~~~~~~~~~G~n~vR~~~~~~-g-----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+...+. +.|+.++++|+|+|-+-...+ . +|... .+.| .|. ..+.|.++|++|+++||+||+++.-+
T Consensus 199 t~~~l~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~-~~G--t~~df~~lv~~~H~~Gi~VilD~V~NH 275 (755)
T 3aml_A 199 TYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSS-RSG--TPEDLKYLVDKAHSLGLRVLMDVVHSH 275 (755)
T ss_dssp CHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECG-GGC--CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCC-CCC--CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 445554 469999999999999843221 0 11110 1111 121 26789999999999999999997532
Q ss_pred cccC--CCc-------chhhhhhhh--hCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 144 LQAY--GGK-------TQYVNWAWE--EGIGISSS-NDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 144 w~~~--gg~-------~~y~~W~~~--~G~~~~~~-~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
-..- -|. ..+..|... .|....-. ..--|.+|++++.+.+.++..++.
T Consensus 276 ~~~~~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e 335 (755)
T 3aml_A 276 ASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDE 335 (755)
T ss_dssp BCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHH
Confidence 1000 000 011122210 00000000 011256799999999999998884
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=83.73 E-value=1.3 Score=47.20 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=44.2
Q ss_pred CHHHHHHHHH--HHHHcCCCEEEEccccCC--------------C---CCc---cccCCCCCChHHHHHHHHHHHHHHHc
Q 014151 75 SRARVGAMLQ--AGAKMGLTVCRTWAFNDG--------------G---YNS---LQISPGQFDERVFKALDHVIVEARKN 132 (430)
Q Consensus 75 ~~~~~~~~~~--~~~~~G~n~vR~~~~~~g--------------~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~ 132 (430)
+-.-+.+.|+ .++++|+++|=+-...+. . |.. ....| .| -..+.|++++++|+++
T Consensus 53 dl~gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp-~~--Gt~~dfk~Lv~~aH~~ 129 (683)
T 3bmv_A 53 DWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNP-YF--GSFTDFQNLINTAHAH 129 (683)
T ss_dssp CHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCc-cc--CCHHHHHHHHHHHHHC
Confidence 5677888899 999999999998442110 0 100 01111 11 1277899999999999
Q ss_pred CCEEEEecc
Q 014151 133 GVRLLLSLV 141 (430)
Q Consensus 133 Gi~vil~l~ 141 (430)
||+||+++.
T Consensus 130 GikVilD~V 138 (683)
T 3bmv_A 130 NIKVIIDFA 138 (683)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEc
Confidence 999999875
|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=83.39 E-value=3.3 Score=40.52 Aligned_cols=69 Identities=7% Similarity=0.030 Sum_probs=46.9
Q ss_pred EEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEE
Q 014151 58 VNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 58 ~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vi 137 (430)
+.|+..|- ... ..+...+.++.|++.|++.|=+-.+ .+ ..-.+...+.+.++++.|+++||+||
T Consensus 4 mlGiSvY~-~~~-----~~~~~~~yi~~a~~~Gf~~IFTSL~--------~~--e~~~~~~~~~~~~l~~~a~~~g~~vi 67 (372)
T 2p0o_A 4 MYGISVFL-GEE-----ITNDTIIYIKKMKALGFDGIFTSLH--------IP--EDDTSLYRQRLTDLGAIAKAEKMKIM 67 (372)
T ss_dssp EEEEECCT-TSC-----CCHHHHHHHHHHHHTTCCEEEEEEC--------CC-------CHHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEEEcC-CCC-----CHHHHHHHHHHHHHCCCCEEEccCC--------cc--CCChHHHHHHHHHHHHHHHHCCCEEE
Confidence 46887652 211 2456679999999999995544111 11 11235678999999999999999999
Q ss_pred EeccC
Q 014151 138 LSLVN 142 (430)
Q Consensus 138 l~l~~ 142 (430)
++...
T Consensus 68 ~DIsp 72 (372)
T 2p0o_A 68 VDISG 72 (372)
T ss_dssp EEECH
T ss_pred EECCH
Confidence 98753
|
| >2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A | Back alignment and structure |
|---|
Probab=83.24 E-value=8.3 Score=40.46 Aligned_cols=156 Identities=8% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccccCC----CCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCC
Q 014151 73 DYSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148 (430)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~g 148 (430)
..+.+.+.+.++.|+..++|++-++. .|. .+|.+....|.|.+ +.+.++++.|+++||.||+.+.. +|
T Consensus 98 f~~~~~ik~~id~ma~~KlN~lh~Hl-~D~~ei~~~P~l~~~~~~YT~---~di~eiv~yA~~rgI~VIPEID~----PG 169 (627)
T 2epl_X 98 VLNLSSAKKMIEVLALMGYSTFELYM-EDTYEIENQPYFGYFRGRYTV---AELQEIEDYAADFDMSFVPCIQT----LA 169 (627)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEEEC-SSCBCCTTCTTTTTTTTCBCH---HHHHHHHHHHHHTTCEEEEECCS----SS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEe-ecccccCCCcccCccCCCcCH---HHHHHHHHHHHHcCCEEEEeecc----CC
Confidence 45689999999999999999999865 331 12333222355664 45788999999999999997632 22
Q ss_pred Ccchhhhh--hhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCce-eEEee-cCCCCCCCCCChH
Q 014151 149 GKTQYVNW--AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI-FAWEL-INEPRCMSDPSGD 224 (430)
Q Consensus 149 g~~~y~~W--~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I-~~wel-~NEp~~~~~~~~~ 224 (430)
-......| ..-.... .....-..++|++.+..++.+++++. -+-.=++.+.|..- .+|.- +.+-.. ....+
T Consensus 170 H~~a~l~~g~~~yp~L~-~~~~~l~~~~~~t~~fl~~v~~Ev~~--F~~~~~HiGgDE~~~~~~~~~~~~~g~--~~~~~ 244 (627)
T 2epl_X 170 HLSAFVKWGIKEVQELR-DVEDILLIGEEKVYDLIEGMFQTMAH--LHTRKINIGMDEAHLVGLGRYLIKHGF--QNRSL 244 (627)
T ss_dssp CCHHHHTCCSHHHHTTE-EETTEECTTCHHHHHHHHHHHHHHTT--SSCCEEECCCCCCTTTTSSHHHHHHCC--CCHHH
T ss_pred cHHHHHhhhhhhccccc-CCCCccCCCChhHHHHHHHHHHHHHh--CCCCeEEecchhcccchhhHHHHHcCC--ccHHH
Confidence 12111111 0000000 00111124578888888888888877 22222333333221 11100 000000 00134
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014151 225 TLQDWIDEMSAFVKSID 241 (430)
Q Consensus 225 ~~~~w~~~~~~~Ir~~d 241 (430)
....|++++.+.+++.+
T Consensus 245 l~~~f~~~v~~~v~~~g 261 (627)
T 2epl_X 245 LMCQHLERVLDIADKYG 261 (627)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 56678999999998764
|
| >2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 | Back alignment and structure |
|---|
Probab=83.00 E-value=9.3 Score=35.78 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCCh------HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDE------RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de------~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
.+...++.++++|+.-| + -| +.+---.|.|.+ -.++...++|..|++.||..++..++
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~-N~-----ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~--------- 172 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-Q-NF-----PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFS--------- 172 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-E-EC-----SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECS---------
T ss_pred CHHHHHHHHHHhCCceE-E-EC-----CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCC---------
Confidence 36677899999999988 6 11 111111122211 14678889999999999988765433
Q ss_pred hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeec----CCCCCCCCCChHHHH
Q 014151 152 QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELI----NEPRCMSDPSGDTLQ 227 (430)
Q Consensus 152 ~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~----NEp~~~~~~~~~~~~ 227 (430)
+ +-.+.+++- .|.++.-++. ---......+-+...
T Consensus 173 -----------------------~-------eeA~amA~a-----------gpDiI~~h~glT~gglIG~~~avs~~~~~ 211 (286)
T 2p10_A 173 -----------------------P-------EDAVAMAKA-----------GADILVCHMGLTTGGAIGARSGKSMDDCV 211 (286)
T ss_dssp -----------------------H-------HHHHHHHHH-----------TCSEEEEECSCC---------CCCHHHHH
T ss_pred -----------------------H-------HHHHHHHHc-----------CCCEEEECCCCCCCCcccCCCcccHHHhH
Confidence 1 112334333 4556666554 111111111334446
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcc
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+.++++.+++|+++|+.+|..+.
T Consensus 212 e~i~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 212 SLINECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp HHHHHHHHHHHHHCSCCEEEEES
T ss_pred HHHHHHHHHHHHhCCCcEEEecC
Confidence 78899999999999999998874
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=82.71 E-value=2.1 Score=45.79 Aligned_cols=115 Identities=10% Similarity=0.193 Sum_probs=64.6
Q ss_pred CHHHHHHH--HHHHHHcCCCEEEEccccC---C------------CCCcc---ccCC--CC--CChHHHHHHHHHHHHHH
Q 014151 75 SRARVGAM--LQAGAKMGLTVCRTWAFND---G------------GYNSL---QISP--GQ--FDERVFKALDHVIVEAR 130 (430)
Q Consensus 75 ~~~~~~~~--~~~~~~~G~n~vR~~~~~~---g------------~~~~~---~~~p--g~--~de~~l~~lD~~l~~A~ 130 (430)
+...+.+. |+.++++|+|+|=+-...+ . +|... .+.| |. ......+.|.++|++|+
T Consensus 198 t~~gi~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H 277 (718)
T 2vr5_A 198 TYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELH 277 (718)
T ss_dssp SHHHHTSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHH
T ss_pred CHHHHhcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHH
Confidence 45556666 9999999999999844221 0 11110 1111 11 11233789999999999
Q ss_pred HcCCEEEEeccCCcccCC-Ccch----------hhhhhhh--hCCCC----CCCCCCC-CCCHHHHHHHHHHHHHHHhc
Q 014151 131 KNGVRLLLSLVNNLQAYG-GKTQ----------YVNWAWE--EGIGI----SSSNDSF-FFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 131 ~~Gi~vil~l~~~w~~~g-g~~~----------y~~W~~~--~G~~~----~~~~~~f-~~d~~~~~~~~~~~~~lv~R 191 (430)
++||+||+++.-+ ..+ +... ...|..- .+... .....++ +.+|++++.+.+.++..++.
T Consensus 278 ~~Gi~VilDvV~N--H~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e 354 (718)
T 2vr5_A 278 NAGIEVIIDVVYN--HTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTE 354 (718)
T ss_dssp TTTCEEEEEECCS--CCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHT
T ss_pred HCCCEEEEEeccC--cccCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHH
Confidence 9999999987532 111 0000 0111110 00000 0001222 66789999999999998875
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=82.62 E-value=1.1 Score=47.73 Aligned_cols=67 Identities=9% Similarity=0.155 Sum_probs=44.2
Q ss_pred CHHHHHHHHH--HHHHcCCCEEEEccccCCCCCccc-----cCCCCCC--------h--HHHHHHHHHHHHHHHcCCEEE
Q 014151 75 SRARVGAMLQ--AGAKMGLTVCRTWAFNDGGYNSLQ-----ISPGQFD--------E--RVFKALDHVIVEARKNGVRLL 137 (430)
Q Consensus 75 ~~~~~~~~~~--~~~~~G~n~vR~~~~~~g~~~~~~-----~~pg~~d--------e--~~l~~lD~~l~~A~~~Gi~vi 137 (430)
+-.-+.+.|+ .++++|+|+|=+-.+.+....+.. .....|+ + -..+.|++++++|+++||+||
T Consensus 50 dl~gi~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVi 129 (680)
T 1cyg_A 50 DWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVI 129 (680)
T ss_dssp CHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 5677888899 999999999998442110000000 0000121 1 137789999999999999999
Q ss_pred Eecc
Q 014151 138 LSLV 141 (430)
Q Consensus 138 l~l~ 141 (430)
+++.
T Consensus 130 lD~V 133 (680)
T 1cyg_A 130 IDFA 133 (680)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9975
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=82.35 E-value=1.7 Score=45.76 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcC--C--EEEEecc
Q 014151 75 SRARVGAMLQAGAK-MGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNG--V--RLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~-~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~G--i--~vil~l~ 141 (430)
+..-+.+.|+.+++ +|+|+|=+-...+. +|.. ..+.| .|. ..+.|+++|++|+++| | +||+++.
T Consensus 189 ~~~gi~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~-~~G--t~~dfk~LV~~~H~~G~~I~~~VIlD~V 264 (637)
T 1ji1_A 189 DLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDP-AFG--DNSTLQTLINDIHSTANGPKGYLILDGV 264 (637)
T ss_dssp CHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECT-TTC--CHHHHHHHHHHHHCSSSSSCCEEEEEEC
T ss_pred CHHHHHHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhcc-ccC--CHHHHHHHHHHHHhCCCCccceEEEEEC
Confidence 56677788999999 99999998432211 1111 01122 121 2578999999999999 9 9999875
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=82.02 E-value=1 Score=47.65 Aligned_cols=114 Identities=15% Similarity=0.320 Sum_probs=64.9
Q ss_pred CHHHHHHH--HHHHHHcCCCEEEEccccC---C------------CCCcc---ccCCCCCCh---HHHHHHHHHHHHHHH
Q 014151 75 SRARVGAM--LQAGAKMGLTVCRTWAFND---G------------GYNSL---QISPGQFDE---RVFKALDHVIVEARK 131 (430)
Q Consensus 75 ~~~~~~~~--~~~~~~~G~n~vR~~~~~~---g------------~~~~~---~~~pg~~de---~~l~~lD~~l~~A~~ 131 (430)
+..-+.+. |+.++++|+|+|-+-...+ . +|... .+.| .|.. ...+.|.++|++|++
T Consensus 175 ~~~gi~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~-~~G~~p~~~~~d~~~lv~~~H~ 253 (657)
T 2wsk_A 175 TYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHP-AYACSPETALDEFRDAIKALHK 253 (657)
T ss_dssp SHHHHTSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECG-GGCSSGGGHHHHHHHHHHHHHH
T ss_pred CHHHHhcccchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCH-HHcCCCCcCHHHHHHHHHHHHH
Confidence 44555555 9999999999999843211 0 11110 1111 2221 247899999999999
Q ss_pred cCCEEEEeccCCcccCC-Ccch----------hhhhhhh--hCCC--CCCCCCCC-CCCHHHHHHHHHHHHHHHhc
Q 014151 132 NGVRLLLSLVNNLQAYG-GKTQ----------YVNWAWE--EGIG--ISSSNDSF-FFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 132 ~Gi~vil~l~~~w~~~g-g~~~----------y~~W~~~--~G~~--~~~~~~~f-~~d~~~~~~~~~~~~~lv~R 191 (430)
+||+||+++.-+ ..+ +... ...|... .|.- ......++ +.+|++++.+.+.++..++.
T Consensus 254 ~Gi~VilD~V~N--H~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e 327 (657)
T 2wsk_A 254 AGIEVILDIVLN--HSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVET 327 (657)
T ss_dssp TTCEEEEEECCS--CCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEeec--ccccccccCccccccCCCCccceEECCCCCeeCCCCcCCcccCCCHHHHHHHHHHHHHHHHH
Confidence 999999997532 111 1000 0112211 1100 00011222 67799999999999988874
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=81.62 E-value=0.98 Score=48.37 Aligned_cols=145 Identities=21% Similarity=0.242 Sum_probs=79.3
Q ss_pred HHHHHHHcCCCEEEEccccC---C-----------CCCcc---ccCCCCCC--h----HHHHHHHHHHHHHHHcCCEEEE
Q 014151 82 MLQAGAKMGLTVCRTWAFND---G-----------GYNSL---QISPGQFD--E----RVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 82 ~~~~~~~~G~n~vR~~~~~~---g-----------~~~~~---~~~pg~~d--e----~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+.++++|+|+|=+-...+ . +|... .+. +.|. + ...+.|.++|++|+++||+||+
T Consensus 256 ~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~-~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 256 GLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPE-GSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp HHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEEC-STTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcC-cccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 68999999999999843211 0 11110 011 1121 1 2378999999999999999999
Q ss_pred eccCCcccCCCcc--hh----hhhhh---hhCCCCC--CCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCce
Q 014151 139 SLVNNLQAYGGKT--QY----VNWAW---EEGIGIS--SSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206 (430)
Q Consensus 139 ~l~~~w~~~gg~~--~y----~~W~~---~~G~~~~--~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I 206 (430)
++.-+ +.+... .+ +.|.- ..|.... .-..+ -+.+|++++.+.+.++..++. |+=+ =
T Consensus 335 DvV~N--Ht~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e--------~gVD--G 402 (718)
T 2e8y_A 335 DVVFN--HVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEE--------YNVD--G 402 (718)
T ss_dssp EECTT--CCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHH--------HCCC--E
T ss_pred EEecc--cccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHH--------hCCC--E
Confidence 97532 122110 11 11110 0111000 00011 156789999999999988875 4211 1
Q ss_pred eEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 207 FAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 207 ~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+=.++.+... ..+++++.+.+++.+|+.. ++|.
T Consensus 403 fR~D~~~~~~----------~~~~~~~~~~~~~~~p~~~-ligE 435 (718)
T 2e8y_A 403 FRFDLLGILD----------IDTVLYMKEKATKAKPGIL-LFGE 435 (718)
T ss_dssp EEETTGGGSB----------HHHHHHHHHHHHHHSTTCE-EEEC
T ss_pred EEEeccccCC----------HHHHHHHHHHHHHhCCCeE-EEEe
Confidence 1123443211 2345677778888888754 4553
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=81.48 E-value=2.5 Score=46.80 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCC-------------CCCcc-------ccCCCCCChHHHHHHHHHHHHHHHcCCE
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDG-------------GYNSL-------QISPGQFDERVFKALDHVIVEARKNGVR 135 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g-------------~~~~~-------~~~pg~~de~~l~~lD~~l~~A~~~Gi~ 135 (430)
...+.+.++.++++|+++|=+-+.... +|... .+.| .| -..+.|+++|++|+++||+
T Consensus 852 y~~I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~-~y--Gt~edfk~LV~alH~~GI~ 928 (1108)
T 3ttq_A 852 NVVIAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPT-KY--GTDGDLRATIQALHHANMQ 928 (1108)
T ss_dssp HHHHHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCC-SS--CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCC-CC--CCHHHHHHHHHHHHHCCCE
Confidence 347888899999999999987443210 01000 0011 12 2367899999999999999
Q ss_pred EEEeccC
Q 014151 136 LLLSLVN 142 (430)
Q Consensus 136 vil~l~~ 142 (430)
||+++.-
T Consensus 929 VIlDvV~ 935 (1108)
T 3ttq_A 929 VMADVVD 935 (1108)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9999864
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=80.94 E-value=3.9 Score=43.94 Aligned_cols=67 Identities=12% Similarity=0.203 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC------------------CCCcc---ccCCCCCC-----hHHHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG------------------GYNSL---QISPGQFD-----ERVFKALDHVIV 127 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g------------------~~~~~---~~~pg~~d-----e~~l~~lD~~l~ 127 (430)
.+...+.+.|+.++++|+|+|=+-...+. +|... .+.| .|. ....+.|.++|+
T Consensus 202 Gt~~gl~~~l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~-~yGt~~~~~~~~~efk~lV~ 280 (750)
T 1bf2_A 202 GTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDR-RYAYNKAAGGPTAEFQAMVQ 280 (750)
T ss_dssp TSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCG-GGCSCCSTTHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCc-cccCCCCCccHHHHHHHHHH
Confidence 35666777799999999999998443210 01100 0111 111 123789999999
Q ss_pred HHHHcCCEEEEecc
Q 014151 128 EARKNGVRLLLSLV 141 (430)
Q Consensus 128 ~A~~~Gi~vil~l~ 141 (430)
+|+++||+||+++.
T Consensus 281 ~~H~~Gi~VilDvV 294 (750)
T 1bf2_A 281 AFHNAGIKVYMDVV 294 (750)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCEEEEEEe
Confidence 99999999999875
|
| >1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A* | Back alignment and structure |
|---|
Probab=80.89 E-value=8.2 Score=40.55 Aligned_cols=98 Identities=15% Similarity=0.341 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCccc---CCCcch
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQA---YGGKTQ 152 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~---~gg~~~ 152 (430)
..++++.-+.+++.|+|.|=+ ++. -.++....+..++.+.++-+..+.+||+|-|++. +.. .||.+
T Consensus 183 ~~R~~dYAR~lASiGINgvvl---NNV-----Na~~~~lt~~~l~~v~~lAd~fRpYGIkv~LSvn--FasP~~lGgL~- 251 (708)
T 1gqi_A 183 APRYTDYARINASLGINGTVI---NNV-----NADPRVLSDQFLQKIAALADAFRPYGIKMYLSIN--FNSPRAFGDVD- 251 (708)
T ss_dssp CHHHHHHHHHHHTTTCCEEEC---SCS-----SCCGGGGSHHHHHHHHHHHHHHGGGTCEEEEEEC--TTHHHHTTSCS-
T ss_pred HHHHHHHHHHHhhcCcceEEe---cCC-----CCCcccCCcHHHHHHHHHHHHHHhhcCeEEEEec--ccCccccCCCC-
Confidence 467999999999999998877 432 1244556788899999999999999999999863 211 12221
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEee
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWEL 211 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel 211 (430)
..---||++++.+++-.++| |+--|-+-++-+
T Consensus 252 ----------------TaDPld~~V~~WW~~k~~eI-----------Y~~IPDfgGflV 283 (708)
T 1gqi_A 252 ----------------TADPLDPRVQQWWKTRAQKI-----------YSYIPDFGGFLV 283 (708)
T ss_dssp ----------------CCCTTSHHHHHHHHHHHHHH-----------HHHCTTCCEEEE
T ss_pred ----------------CCCCCCHHHHHHHHHHHHHH-----------HHhCCCcceEEe
Confidence 11134789988888888888 444666667766
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=80.87 E-value=1.7 Score=45.89 Aligned_cols=164 Identities=13% Similarity=0.154 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C-CCCccc------cCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G-GYNSLQ------ISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN- 143 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g-~~~~~~------~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~- 143 (430)
+-..+.+.++.++++|+++|-+-.+.+ + .+..++ ..| .| -..+.|++++++|+++||+||+++.-+
T Consensus 109 ~~~gl~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~-~~--Gt~~d~~~lv~~~h~~Gi~Vi~D~V~NH 185 (655)
T 3ucq_A 109 TLKGVEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRP-DL--GTMDDLSALARALRGRGISLVLDLVLNH 185 (655)
T ss_dssp SHHHHHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCc-cC--CCHHHHHHHHHHHHHCCCEEEEEeeccc
Confidence 467788889999999999999854431 0 000111 011 11 135789999999999999999997532
Q ss_pred ------ccc--CCCcchhhhhhh---h-------hCC-C----------C--CCC----CC------------C-CCCCH
Q 014151 144 ------LQA--YGGKTQYVNWAW---E-------EGI-G----------I--SSS----ND------------S-FFFDP 175 (430)
Q Consensus 144 ------w~~--~gg~~~y~~W~~---~-------~G~-~----------~--~~~----~~------------~-f~~d~ 175 (430)
|-. ..|...|..|.. . .+. + . ... .. + =+.+|
T Consensus 186 ~s~~~~wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~qpDLn~~np 265 (655)
T 3ucq_A 186 VAREHAWAQKARAGDPKYRAYFHLFPDRRGPDAFEATLPEIFPDFAPGNFSWDEEIGEGEGGWVWTTFNSYQWDLNWANP 265 (655)
T ss_dssp EETTSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHTTCCCSCTTTSCSSEEEETTSSSSSCEEEECSSSTTEEEBCTTSH
T ss_pred cccchHHHHHhhcCCCCCcccEEEcCCCCCCccccccCccccccCCCCcccccccccccCCceEeccccCCCCccCCCCH
Confidence 100 000111222210 0 000 0 0 000 00 1 15679
Q ss_pred HHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 176 SIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 176 ~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
++++.+.+.++.+++. .+.|.++-.-+.+ .-++... +.+.+....+++++.+.+++..|+.. ++|.
T Consensus 266 ~V~~~i~~~l~~w~~~--GvDGfRlDa~~~l-----~k~~g~~-~~~~~~~~~~l~~~r~~~~~~~p~~~-~vgE 331 (655)
T 3ucq_A 266 DVFLEFVDIILYLANR--GVEVFRLDAIAFI-----WKRLGTD-CQNQPEVHHLTRALRAAARIVAPAVA-FKAE 331 (655)
T ss_dssp HHHHHHHHHHHHHHTT--TCCEEEETTGGGS-----CCCTTSC-SSSCHHHHHHHHHHHHHHHHHCTTCE-EEEC
T ss_pred HHHHHHHHHHHHHHHC--CCCEEEEechhhc-----cccCCCc-cCCcHHHHHHHHHHHHHHHHhCCCeE-EEEe
Confidence 9999999999998864 5555555222222 1222211 11234567888999888999998854 4553
|
| >1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B* | Back alignment and structure |
|---|
Probab=80.47 E-value=5.8 Score=40.51 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCc-------cc-----cCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNS-------LQ-----ISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~-------~~-----~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+.+.+.+.++.|+..++|++-++.-.+-+|+- +. ...+.|. -+.+.++++.|+++||.||+.+.
T Consensus 165 ~~~~~ik~~id~ma~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~Ga~~~~~~YT---~~di~eiv~yA~~rgI~VIPEID 241 (507)
T 1now_A 165 LPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYT---PNDVRMVIEYARLRGIRVLPEFD 241 (507)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCBC---HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeeccCccceeeccchhhhhcccCcCCCCCCC---HHHHHHHHHHHHHcCCEEEEccC
Confidence 568999999999999999999986644434531 10 0023455 35688999999999999999763
Q ss_pred CCcccCCCcc----hhhhhhhh--hCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 142 NNLQAYGGKT----QYVNWAWE--EGIGISSS-NDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 142 ~~w~~~gg~~----~y~~W~~~--~G~~~~~~-~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
. +|-.. .|+..... .+...... ..---+++++.+..++.+++++.-
T Consensus 242 ~----PGH~~a~~~~~p~L~~~~~~~~~~~~~~~~l~p~~~~t~~fl~~v~~Ev~~l 294 (507)
T 1now_A 242 T----PGHTLSWGKGQKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEV 294 (507)
T ss_dssp E----SSSCTTHHHHSTTCEEECCC----CCSEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred C----chhHHHHHHhCHHhcccCCCCCCcCCCCcccCCCcHHHHHHHHHHHHHHHHh
Confidence 1 11111 12211000 00000000 001134688889999999998875
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=80.26 E-value=1.5 Score=46.45 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---CCCCccccCC-CCCCh--HHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---GGYNSLQISP-GQFDE--RVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g~~~~~~~~p-g~~de--~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+-..+.+.++.++++|+++|=+-.+.. +....+++.. ...++ -..+.|..+++.|+++||+||+++.-
T Consensus 13 tf~~i~~~LdyL~~LGvt~V~LsPi~e~~~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV~ 86 (704)
T 3hje_A 13 KFSEIRNRLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIVP 86 (704)
T ss_dssp CHHHHHTTHHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCccCCCCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeecc
Confidence 467788889999999999999844321 1100010000 00011 23678999999999999999999754
|
| >2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A* | Back alignment and structure |
|---|
Probab=80.14 E-value=4.8 Score=40.36 Aligned_cols=110 Identities=11% Similarity=0.128 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccc-------------------------------cCCCCCChHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQ-------------------------------ISPGQFDERVFKAL 122 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~-------------------------------~~pg~~de~~l~~l 122 (430)
.+.+.+.+.++.|+...+|++-+++-.+ +|+--. +..|.|. -+.+
T Consensus 22 ~~~~~ik~~ID~mA~~KlN~lH~HltDd-gwriei~~~pl~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~YT---~~di 97 (442)
T 2yl5_A 22 FTLNQLKRIVDKASELGYSDVHLLLGND-GLRFLLDDMTITANGKTYASDDVKKAIIEGTKAYYDDPNGTALT---QAEV 97 (442)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEEEESS-SBCBCCSCCCEEETTEEECHHHHHHHHHHHHHHHCCCTTCSCBC---HHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEEEcCC-CcceeccCCcceeceeecccccccccccCCccccccCCCCCCcC---HHHH
Confidence 4688999999999999999999876444 454110 0113444 3567
Q ss_pred HHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCC-CC------CCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 123 DHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGI-SS------SNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 123 D~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~-~~------~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
.++++.|+++||.||+.+.. +|-......+...-+... .. ...--.++|++.+..++.+++++.-
T Consensus 98 ~eIv~YA~~rgI~VIPEID~----PGH~~a~l~~~p~l~~~~p~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~l 169 (442)
T 2yl5_A 98 TELIEYAKSKDIGLIPAINS----PGHMDAMLVAMEKLGIKNPQAHFDKVSKTTMDLKNEEAMNFVKALIGKYMDF 169 (442)
T ss_dssp HHHHHHHHTTTCEEEEEEEE----SSSCHHHHHHHHHTTCCCCEEESSSEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeeeeeccc----chhHHHHHHhChhhcCCCCccccCCCCCcccCCCChhHHHHHHHHHHHHHHh
Confidence 89999999999999997631 221111111111111100 00 0001135788999999999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 430 | ||||
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 1e-83 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 1e-56 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 5e-54 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 2e-33 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 7e-18 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 7e-12 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 6e-09 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 1e-08 | |
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 2e-08 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 4e-08 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 1e-07 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 3e-06 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 3e-06 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 6e-06 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 9e-06 | |
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 2e-04 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 3e-04 | |
| d1bhga3 | 304 | c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 { | 0.002 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 0.003 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 0.004 |
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 258 bits (660), Expect = 1e-83
Identities = 160/376 (42%), Positives = 233/376 (61%), Gaps = 7/376 (1%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
FV +GTHF L+GK+LY+NG+N+YWLM A +R +V Q +K + V RTWAF
Sbjct: 2 NFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAF 61
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
+ GG LQ +PG ++E++F+ LD VI EA+K G+ L++SLVNN A+GGK QYV WA +
Sbjct: 62 SHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 121
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
G + +S+D FF +P + ++K+ VK VLTR NTIT V Y++DPTI +WELINEPRC S
Sbjct: 122 RGQKL-TSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPS 180
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279
D SG T Q+W+ EM+ ++KSID HL+ +GLEGFYG + G++FI
Sbjct: 181 DLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMR-----QYNPNSYIFGTNFIS 235
Query: 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
N+ IDF ++H+YP+ W L E K+ ++W+ HI+D K L KP+ E+G S
Sbjct: 236 NNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDS-KMLKKPLLIAEFGKST 294
Query: 340 LIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTS 399
G+ + RD ++ I ++ AK G L WQ+ +GM ++D + +V E S
Sbjct: 295 KTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPS 354
Query: 400 TYKLLTEQSCGLGRIS 415
T +++ QS L ++S
Sbjct: 355 TSRVILLQSLRLSKLS 370
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 189 bits (481), Expect = 1e-56
Identities = 94/406 (23%), Positives = 166/406 (40%), Gaps = 55/406 (13%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWA 98
FV NG HF L GK + G N ++ R R+ L +G+ R A
Sbjct: 3 FVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLA 62
Query: 99 FNDG------GYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152
++ ++ G +DE + + LD+++VE K + ++L N Q GG TQ
Sbjct: 63 VSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 122
Query: 153 YVNWAWEEGI----------GISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202
Y+ W E + + + SF+ + ++ ++ ++TR N+I G Y +
Sbjct: 123 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVD 182
Query: 203 DPTIFAWELINEPRCMSDPSG----DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKS 258
D TI +W+L NEPR + + DW+ +A++K++D HLV+ G EG G +
Sbjct: 183 DATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVN 242
Query: 259 PKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD------LEFEDDLKFVT 312
+ FI +ID+ + H++ +W + +
Sbjct: 243 DMQ--------------VFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQ 288
Query: 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPS----LRDKLYKTILDIVYKSAKRKR 368
+M +HI+ K+LNKP+ E+GL + + RD ++ + +++ S ++
Sbjct: 289 NYMRAHIDVA-KQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGE 347
Query: 369 SGAGALIWQLFVEGMEE--------YNDDFGIVPWERTSTYKLLTE 406
AG IW G +D G P E Y +
Sbjct: 348 PSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDT 393
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 181 bits (459), Expect = 5e-54
Identities = 100/384 (26%), Positives = 150/384 (39%), Gaps = 59/384 (15%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
FVT +GT F +DGK Y G N YW + A V + + GL V R W F
Sbjct: 3 SFVTISGTQFNIDGKVGYFAGTNCYWCS----FLTNHADVDSTFSHISSSGLKVVRVWGF 58
Query: 100 NDGG-----------YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148
ND S S + LD+V+ A ++ ++L++ VNN YG
Sbjct: 59 NDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118
Query: 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208
G YVN +++ + + ++ YV+ V++R Y N IFA
Sbjct: 119 GINAYVNAFGGN-------ATTWYTNTAAQTQYRKYVQAVVSR--------YANSTAIFA 163
Query: 209 WELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEM 268
WEL NEPRC S D + W +S +VKS+D HLVT+G EG
Sbjct: 164 WELGNEPRCN-GCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAY-----P 217
Query: 269 WASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNK 328
+ G+DF +N ++DF + H+YPD W + + W+ +H K
Sbjct: 218 YTYGEGTDFAKNVQIKSLDFGTFHLYPDSW------GTNYTWGNGWIQTHAAAC-LAAGK 270
Query: 329 PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQL---FVEGMEE 385
P F EYG E ++ R G + WQ F G +
Sbjct: 271 PCVFEEYGAQQNPCTNE------------APWQTTSLTTRGMGGDMFWQWGDTFANGAQS 318
Query: 386 YNDDFGIVPWERTSTYKLLTEQSC 409
+D + + ++ L+
Sbjct: 319 NSDPYTVWYNS-SNWQCLVKNHVD 341
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 126 bits (316), Expect = 2e-33
Identities = 47/372 (12%), Positives = 101/372 (27%), Gaps = 84/372 (22%)
Query: 42 VTRNGTHFMLDGKALYVNGWNSYWLM-----DHAVHDYSRARVGAMLQAGAKMGLTVCRT 96
++ +GT+ +G ++++G N W+ H + ++ + L G R
Sbjct: 2 LSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRV 61
Query: 97 WAFNDGGYNSLQIS---PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153
W +G + D + + + A+++ + + +L N +
Sbjct: 62 WLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL 121
Query: 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELIN 213
+ + Y H +K + +N+ + W+++N
Sbjct: 122 NGLMVD--------------TRKLQSYIDHALKPMANA--------LKNEKALGGWDIMN 159
Query: 214 EPRCMSDP--------------------------SGDTLQDWIDEMSAFVKSIDKKHLVT 247
EP P S + +++ +A +K +D +VT
Sbjct: 160 EPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVT 219
Query: 248 VGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDD 307
VG S + + F VH Y
Sbjct: 220 VGSWNMKADTDAMGFH----NLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFG------ 269
Query: 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRK 367
+ L KP+ E+ + S+ + Y
Sbjct: 270 -----NESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAY-------------T 311
Query: 368 RSGAGALIWQLF 379
+ +GA W
Sbjct: 312 KGYSGAWTWSRT 323
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 82.4 bits (202), Expect = 7e-18
Identities = 51/377 (13%), Positives = 107/377 (28%), Gaps = 59/377 (15%)
Query: 40 GFVTRNGTHFM-LDGKALYVNGWNSYWLMDH--AVHDYSRARVGAMLQAGAKMGLTVCR- 95
G+ +G + + + + G N + VH +ML +G R
Sbjct: 4 GYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRL 63
Query: 96 ---TWAFNDGGY----NSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYG 148
G N Q++ + +D ++ A + G+R++L
Sbjct: 64 PYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRP----- 118
Query: 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208
S + ++ + ++ + R Y+ +PT+
Sbjct: 119 --------------DCSGQSALWYTSSVSEATWISDLQALAQR--------YKGNPTVVG 156
Query: 209 WELINEPRCMSDPSG----DTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTV 264
++L NEP + + + V S++ L+ V Y S
Sbjct: 157 FDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGN 216
Query: 265 NPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDL--KFVTKWMLSHIEDG 322
+ N N S H Y + F D + +
Sbjct: 217 L------QGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYL 270
Query: 323 DKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEG 382
+ PV+ E+G + + + KT++ + +A+ W
Sbjct: 271 FNQNIAPVWLGEFGTTL-----QSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWSW---- 321
Query: 383 MEEYNDDFGIVPWERTS 399
+ D GI+ + +
Sbjct: 322 NPDSGDTGGILKDDWQT 338
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 64.3 bits (155), Expect = 7e-12
Identities = 25/231 (10%), Positives = 69/231 (29%), Gaps = 16/231 (6%)
Query: 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGV 134
+ R + + GL+ R F + L+ PG+ + + LD I G+
Sbjct: 12 PKERWKEDARRMREAGLSHVRIGEFA---WALLEPEPGRLE---WGWLDEAIATLAAEGL 65
Query: 135 RLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNT 194
+++L +Y + G ++ + ++T
Sbjct: 66 KVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAE 125
Query: 195 ITGVEYRNDPTIFAWELINEP------RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTV 248
Y + ++ NE RC + + W++ ++++++
Sbjct: 126 R----YGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAF 181
Query: 249 GLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF 299
+ + + + + D+ R +++ F + +
Sbjct: 182 WSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAH 232
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 55.0 bits (131), Expect = 6e-09
Identities = 43/337 (12%), Positives = 99/337 (29%), Gaps = 68/337 (20%)
Query: 87 AKMGLTVCRT----WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142
A+ G R G++ E +D + +K + L+L + +
Sbjct: 38 AEAGFDHVRLPFDYPIIESDDN------VGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91
Query: 143 NLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202
+ DP+ K F + + R Y N
Sbjct: 92 APGYRFQDFKTSTLFE---------------DPNQQKRFVDIWRFLAKR--------YIN 128
Query: 203 DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK----- 257
+ A+EL+N+ +P + E ++ ID + +G + P
Sbjct: 129 EREHIAFELLNQVV---EPDSTRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNL 185
Query: 258 ---------------SPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDL 302
+P T W+ + + + + + + +
Sbjct: 186 ADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFM 245
Query: 303 EFEDDLKFVTKWMLSHIE---DGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDI 359
++LK + + ++ + ++ ++ E+G+ + R K ++ + +
Sbjct: 246 MELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISL 302
Query: 360 VYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWE 396
+ + G +W E YN+D V E
Sbjct: 303 L------EEYDIGGAVWNYKKMDFEIYNEDRKPVSQE 333
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 53.7 bits (128), Expect = 1e-08
Identities = 29/300 (9%), Positives = 72/300 (24%), Gaps = 72/300 (24%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
G +NG + +G+ + G + H + Y + G R
Sbjct: 3 GLHVKNGRLYEANGQEFIIRGVS------HPHNWYPQHT--QAFADIKSHGANTVRVVLS 54
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
N + + + +VI ++N + +L + +
Sbjct: 55 NGVRW----------SKNGPSDVANVISLCKQNRLICMLEVHDTTGYGE----------- 93
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
S Y + + + + + NEP
Sbjct: 94 ------------QSGASTLDQAVDYWIELKSV--------LQGEEDYVLINIGNEPYGND 133
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279
+ +++ +H + V + + +D +
Sbjct: 134 SATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWT----------NTMRNNADQVY 183
Query: 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
S+ S+H+Y + ++ + P+ E+G +
Sbjct: 184 ASDPTGNTVFSIHMYGVYSQA-------------STITSYLEHFVNAGLPLIIGEFGHDH 230
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 53.7 bits (128), Expect = 2e-08
Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 27/306 (8%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAM----LQAGAKMGLTVCRT 96
+VT + ++G+ L + VH R V ++ + +G
Sbjct: 5 YVTWDEHSIFVNGERLMIFS--------GEVH-PYRLPVASLYIDIFEKVKALGFNCVSF 55
Query: 97 WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156
+ + L+ +PG + L A++ G+ LL + A + W
Sbjct: 56 YVD----WALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGW 111
Query: 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPR 216
+ +S++++ K +Y + I + N I ++ NE
Sbjct: 112 LQRVDGILRTSDEAY------LKATDNYASNIAAT---IAKAQITNGGPIILYQPENEYS 162
Query: 217 CMS-DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275
+G ++ + + G +P +++
Sbjct: 163 GACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYP 222
Query: 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEY 335
+N ++ Y V + G K +
Sbjct: 223 LGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNH 282
Query: 336 GLSNLI 341
+
Sbjct: 283 EFERVF 288
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 52.6 bits (125), Expect = 4e-08
Identities = 46/279 (16%), Positives = 78/279 (27%), Gaps = 51/279 (18%)
Query: 81 AMLQAGAKMGLTVCR---TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLL 137
M+ A + G R +W + G S + + + V+ N + ++
Sbjct: 65 QMIDAIKQKGFNTVRIPVSWHPHVSG------SDYKISDVWMNRVQEVVNYCIDNKMYVI 118
Query: 138 LSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197
L N Y + S KY
Sbjct: 119 L---NTHHDVDKVKGYFPSSQY--------------MASSKKYITSVWAQ--------IA 153
Query: 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257
+ N +E +NEPR + + + ++ + I++ + V G K
Sbjct: 154 ARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGK 213
Query: 258 SPKRLTVNPEMWASALGS------DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFV 311
+ R + P AS G+ S N+N SVH Y F L D
Sbjct: 214 NASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNA 273
Query: 312 T-----------KWMLSHIEDGDKELNKPVFFTEYGLSN 339
W + +I + PV E G +
Sbjct: 274 WNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVD 312
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 50.9 bits (120), Expect = 1e-07
Identities = 52/343 (15%), Positives = 93/343 (27%), Gaps = 51/343 (14%)
Query: 61 WNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCR----TWAFNDGGYNSLQISPGQFDE 116
W + L++ + A+ R ++D G +P E
Sbjct: 4 WRGFNLLEAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRG------NPFIIRE 57
Query: 117 RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPS 176
F+ +D VI K G+ + + + + D +
Sbjct: 58 DFFEKIDRVIFWGEKYGIHICI-------------SLHRAPGYSVNKEVEEKTNLWKDET 104
Query: 177 IHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRC--MSDPSGDTLQDWIDEMS 234
+ F H+ + R T ++ LINEP S + I
Sbjct: 105 AQEAFIHHWSFIARRY-------KGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTI 157
Query: 235 AFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIY 294
++ ID + L+ + G+ P S G ++ S
Sbjct: 158 TEIRKIDPERLIIIDGLGYGN--IPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFP 215
Query: 295 PDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYK 354
W + F + ++ VF E G N + K +
Sbjct: 216 VPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKGIEVFCGEMGAYN---KTPHDVVLKWLE 272
Query: 355 TILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWER 397
+L+I K G +W + FGI+ ER
Sbjct: 273 DLLEIF------KTLNIGFALW--------NFRGPFGILDSER 301
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 44/289 (15%), Positives = 88/289 (30%), Gaps = 44/289 (15%)
Query: 87 AKMGLTVCR----TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142
+ +GL R WAF + + + L+ + ARKN +R+ + L
Sbjct: 78 SNLGLNFVRIPIGYWAFQLLD-------NDPYVQGQVQYLEKALGWARKNNIRVWIDLH- 129
Query: 143 NLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN 202
A G + + N + + +++ ++ FK Y
Sbjct: 130 --GAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLNTIFKKYGG-------------NEY 174
Query: 203 DPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKR- 261
+ EL+NEP + D L+ + + ++ V + + F
Sbjct: 175 SDVVIGIELLNEP-LGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIH-DAFQVFGYWNNF 232
Query: 262 LTVNPEMWASAL--------GSDFIRNSNNDNIDFASVHIYP----DHWFHDLEFEDDLK 309
LTV W + + + ND+I A + HW E+ L
Sbjct: 233 LTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALT 292
Query: 310 FVTKWM--LSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTI 356
KW+ ++ + + + I + + + I
Sbjct: 293 DCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYI 341
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 46.4 bits (109), Expect = 3e-06
Identities = 41/301 (13%), Positives = 80/301 (26%), Gaps = 81/301 (26%)
Query: 42 VTRNGTHFMLDGKALYVNGWNSYWLMDH--AVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
+T +G + G+ G + +W A Y+ V + T+ R
Sbjct: 5 LTVSGNQILAGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAK---TEFNATLIRAAI- 60
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
G S S E LD V+ A + YV
Sbjct: 61 --GHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDM------------------YVII--- 97
Query: 160 EGIGISSSNDSFFFDPSIHK-YFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM 218
D + + + + V T+ Y + +E+ NEP +
Sbjct: 98 ---------DFHSHEAHTDQATAVRFFEDVATK--------YGQYDNVI-YEIYNEPLQI 139
Query: 219 SDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFI 278
S + ++ + + + +++ID +L+ VG + + S
Sbjct: 140 SWV--NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD--------------VDVASQNP 183
Query: 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338
+ N + + + +F TE+G
Sbjct: 184 IDRANIAYTLHFYAGTHGQSYRN-----------------KAQTALDNGIALFATEWGTV 226
Query: 339 N 339
N
Sbjct: 227 N 227
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 45.5 bits (107), Expect = 6e-06
Identities = 27/264 (10%), Positives = 64/264 (24%), Gaps = 58/264 (21%)
Query: 81 AMLQAGAKMGLTVCR----TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRL 136
+ G+ + R G D L + + G
Sbjct: 35 NTIDTLISKGMNIFRVPFMMERLVPNS------MTGSPDPNYLADLIATVNAITQKGAYA 88
Query: 137 LLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196
++ N + Y + F+ + KTV ++
Sbjct: 89 VVDPHNYGRYYNSIISSPSD------------------------FETFWKTVASQ----- 119
Query: 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID-KKHLVTVGLEGFYG 255
+ ++P + ++ NE D + + ++S + V + G
Sbjct: 120 ---FASNPLV-IFDTDNEYH---DMDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTG 172
Query: 256 PKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWM 315
+ W + + +D I + +H Y D + +
Sbjct: 173 AWT----------WTNVNDNMKSLTDPSDKIIY-EMHQYLDSDGSGTSATCVSSTIGQER 221
Query: 316 LSHIEDGDKELNKPVFFTEYGLSN 339
++ + K E+
Sbjct: 222 ITSATQWLRANGKKGIIGEFAGGA 245
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 44.8 bits (105), Expect = 9e-06
Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 85/299 (28%)
Query: 45 NGTHFMLDGKALYVNGWNSYWLMDHAVHD--YSRARVGAMLQAGAKMGLTVCRTW--AFN 100
NG KA G + +W + + Y+ V ++ + ++ R
Sbjct: 8 NGNKIYAGEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKD---WKSSIVRAAMGVQE 64
Query: 101 DGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160
GGY Q ++ V+ A N + + + W
Sbjct: 65 SGGYL-------QDPAGNKAKVERVVDAAIANDMYAI----------------IGWHS-- 99
Query: 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD 220
+ + + + + Y N P +E+ NEP +S
Sbjct: 100 -----------HSAENNRSEAIRFFQEMARK--------YGNKP-NVIYEIYNEPLQVSW 139
Query: 221 PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN 280
+T++ + + + + +++ID +L+ V S + R+
Sbjct: 140 S--NTIKPYAEAVISAIRAIDPDNLIIV-----------------GTPSWSQNVDEASRD 180
Query: 281 SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
N ++H Y H + + +F TE+G N
Sbjct: 181 PINAKNIAYTLHFYA--GTHGESLRNKARQALNN------------GIALFVTEWGTVN 225
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 38/252 (15%), Positives = 69/252 (27%), Gaps = 39/252 (15%)
Query: 81 AMLQAGAKMGLTVCR----TWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRL 136
A G + R WAF LD I AR N +++
Sbjct: 77 QDFANIASQGFNLVRIPIGYWAFQILD------DDPYVSGLQESYLDQAIGWARNNSLKV 130
Query: 137 LLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196
+ L + + F + S + + +L + +
Sbjct: 131 WVDL-----------HGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSA-- 177
Query: 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGP 256
+ ELINEP D++ ++++ K V + + F
Sbjct: 178 ---EEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPY 234
Query: 257 KSPKRLTVNPEMWAS---------ALGSDFIRNSNNDNIDFA----SVHIYPDHWFHDLE 303
+ + SD + S +++I A + + HW E
Sbjct: 235 NYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGE 294
Query: 304 FEDDLKFVTKWM 315
F L KW+
Sbjct: 295 FAAALTDCIKWL 306
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 40.2 bits (93), Expect = 3e-04
Identities = 44/321 (13%), Positives = 89/321 (27%), Gaps = 63/321 (19%)
Query: 27 GGLNVSYPKEP-EMGFVTRNGTHFMLD--GKALYVNGWNSYWLMDHAVHDYSRARVGAML 83
G V P E + V NG + G + + G +++ L + A+
Sbjct: 3 GMQAVKSPSEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEI-VNENAFVALS 61
Query: 84 QAGAKMGLTVCRT-WAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142
G + R + GY + V + I A ++ + +++
Sbjct: 62 ---NDWGSNMIRLAMYIGENGY--------ATNPEVKDLVYEGIELAFEHDMYVIV---- 106
Query: 143 NLQAYGGKTQYVNWAWEEGIGISSSNDS--FFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200
+W + S + F I ++K + KN E
Sbjct: 107 ------------DWHVHAPGDPRADVYSGAYDFFEEIADHYKDH------PKNHYIIWEL 148
Query: 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPK 260
N+P+ + + V+ + +K
Sbjct: 149 ANEPSPNNNGGPGLT-----NDEKGWEAVKEYAEPIVEMLREKG--------------DN 189
Query: 261 RLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLK--FVTKWMLSH 318
+ V W+ + +NI + SVH Y + ++++
Sbjct: 190 MILVGNPNWSQRPDLSADNPIDAENIMY-SVHFYTGSHGASHIGYPEGTPSSERSNVMAN 248
Query: 319 IEDGDKELNKPVFFTEYGLSN 339
+ + VF TE+G S
Sbjct: 249 VRYA-LDNGVAVFATEWGTSQ 268
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.002
Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 43/262 (16%)
Query: 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206
Y + + GI + ++ ++ ++F + + +N P +
Sbjct: 58 YPYAEEVMQMCDRYGIVVI--DECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV 115
Query: 207 FAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNP 266
W + NEP ++ ++ + A KS+D VT Y
Sbjct: 116 VMWSVANEP----ASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAA---------- 161
Query: 267 EMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKEL 326
+ +D ++ Y W+HD + ++ + + E+ K+
Sbjct: 162 -------------DKGAPYVDVICLNSYY-SWYHDYGHLELIQ---LQLATQFENWYKKY 204
Query: 327 NKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD-----IVYKSAKRKRSGAGALIWQLFVE 381
KP+ +EYG + + + + KR++ G LIW
Sbjct: 205 QKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADF 264
Query: 382 GMEEYNDD-----FGIVPWERT 398
E+ GI +R
Sbjct: 265 MTEQSPTRVLGNKKGIFTRQRQ 286
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 36.8 bits (84), Expect = 0.003
Identities = 25/219 (11%), Positives = 55/219 (25%), Gaps = 53/219 (24%)
Query: 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFN 100
+ G + ++GK L + G + D ++ L+ +GL R
Sbjct: 6 LNSSGGRQYSVNGKPLLIRGGG--YTPDLF-LRWNETAAADKLKYVLNLGLNTVRLEG-- 60
Query: 101 DGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE 160
+ F D GV + WE
Sbjct: 61 -----------HIEPDEFFDIAD-------DLGVLTMPGW------------ECCDKWEG 90
Query: 161 GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD 220
+ + + S + K + + R R+ P++ ++ + ++
Sbjct: 91 QVNGEEKGE--PWVESDYPIAKASMFSEAER--------LRDHPSVISFHIGSDFAPD-- 138
Query: 221 PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP 259
+ +K+ D V P +
Sbjct: 139 ------RRIEQGYLDAMKAADFLLPVIPAASARPSPITG 171
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 36.8 bits (84), Expect = 0.004
Identities = 28/300 (9%), Positives = 76/300 (25%), Gaps = 76/300 (25%)
Query: 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAF 99
GF T + +G + G N H + + + ++ A G R
Sbjct: 2 GFYVSGTTLYDANGNPFVMRGINHG-------HAWYKDQATTAIEGIANTGANTVRIVLS 54
Query: 100 NDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWE 159
+ G + + + + ++I A N + +L + +
Sbjct: 55 DGGQW----------TKDDIQTVRNLISLAEDNNLVAVLEVHDA---------------- 88
Query: 160 EGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219
+ + + Y + + + NE
Sbjct: 89 ----------TGYDSIASLNRAVDYWIEMRSA--------LIGKEDTVIINIANEWFGSW 130
Query: 220 DPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279
D + D + +++ + + + G+ + +
Sbjct: 131 DGAAWA--DGYKQAIPRLRNAGLNNTLMIDAAGWGQ-----------FPQSIHDYGREVF 177
Query: 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339
N++ S+H+Y + + ++ D + + E+G +
Sbjct: 178 NADPQRNTMFSIHMYEYAGGNASQVRTNI------------DRVLNQDLALVIGEFGHRH 225
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 430 | |||
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 99.97 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 99.97 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 99.97 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.97 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.96 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 99.95 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 99.95 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 99.95 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.91 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 99.91 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.9 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 99.9 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.89 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.87 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.87 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 99.87 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.86 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.86 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.86 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.86 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.84 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.84 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 99.83 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.83 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.82 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 99.82 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.81 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 99.81 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 99.78 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.78 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.78 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.74 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.74 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.68 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 99.55 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 99.55 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 99.53 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 99.51 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 99.49 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 99.43 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 99.41 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 99.29 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 99.2 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 99.1 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 99.06 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 98.69 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 98.51 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.4 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 98.34 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 98.33 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 98.21 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 98.1 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 98.05 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 97.97 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 96.05 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 96.01 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 95.97 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.94 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 95.89 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 95.34 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 95.34 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 95.27 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 95.22 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.11 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 95.11 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 95.1 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 95.07 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.04 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 94.82 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 93.87 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 93.82 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 93.73 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 93.37 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 93.26 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 93.16 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 93.09 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 93.04 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 92.93 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 92.63 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 92.54 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 92.47 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 92.33 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 91.99 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 91.79 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 91.72 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 91.71 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 91.68 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 91.66 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 90.5 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 90.43 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 90.02 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 89.43 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 89.02 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 88.93 | |
| d1cnva_ | 283 | Seed storage protein {Jack bean (Canavalia ensifor | 85.08 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 84.23 | |
| d2q02a1 | 271 | Putative cytoplasmic protein STM4435 {Salmonella t | 82.53 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 82.32 | |
| d1qbaa3 | 443 | Bacterial chitobiase (beta-N-acetylhexosaminidase) | 81.61 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 81.39 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 80.97 | |
| d1nowa1 | 353 | beta-hexosaminidase B {Human (Homo sapiens) [TaxId | 80.72 |
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=7e-56 Score=437.64 Aligned_cols=369 Identities=44% Similarity=0.842 Sum_probs=311.0
Q ss_pred CcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHH
Q 014151 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVF 119 (430)
Q Consensus 40 gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l 119 (430)
.||+|+|++|++||+|+++.|+|.||.........+.+.++++|+.||++|+|+||+|++++..|...++.||.+++..+
T Consensus 2 ~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l 81 (370)
T d1rh9a1 2 NFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMF 81 (370)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHH
T ss_pred CcEEEECCEEEECCEEEEEEEEecccCcccccCCCCHHHHHHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHH
Confidence 59999999999999999999999988765544455778899999999999999999999887778888999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 120 KALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 120 ~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
+.||++|++|+++||+||++||++|..+.|.+.+..|....|... .....||+||..++.++++++.+++|.|+++..+
T Consensus 82 ~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~ 160 (370)
T d1rh9a1 82 QGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKL-TSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVA 160 (370)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCC-CCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHcCCEEEEecccccccccCCcccccccccCCCcC-CccccccCCHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 999999999999999999999999888888888889987655432 4456789999999999999999999999999999
Q ss_pred ccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhh
Q 014151 200 YRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~ 279 (430)
|+++|+|++|+++|||........+.+++|++++++.||++||+++|+++.+++.+.... ..++ .....+.+...
T Consensus 161 ~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~ 235 (370)
T d1rh9a1 161 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMR---QYNP--NSYIFGTNFIS 235 (370)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGG---GGSG--GGCCCSCCHHH
T ss_pred hcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhhCCCCeEEEecccccccccc---ccCC--Ccccccccccc
Confidence 999999999999999987665566889999999999999999999999987654322110 0011 11123344445
Q ss_pred ccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHH
Q 014151 280 NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDI 359 (430)
Q Consensus 280 ~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~ 359 (430)
....+.+||+++|.||+.|.+.........+...++..+.+.+++ .+||++|+|||......+.+...|..+++.+++.
T Consensus 236 ~~~~~~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~ 314 (370)
T d1rh9a1 236 NNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKM-LKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGT 314 (370)
T ss_dssp HHTSTTCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHH-HTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHH
T ss_pred cccCCcceEEEeccccCccccCCcchhhhhHHHHHHHHHHHHHHh-CCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHH
Confidence 556788999999999987765544444445566677777777775 8999999999998877666788899999999999
Q ss_pred HHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCCCccHHHHHHHHHHHHhhcc
Q 014151 360 VYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWERTSTYKLLTEQSCGLGRIS 415 (430)
Q Consensus 360 ~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~~~~~~~~~~~~~~~~~~~~ 415 (430)
++++.+.+..++|+++|+|.+++.++|.|||+|++.++++|.++|+.++++|+.|+
T Consensus 315 ~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 315 IFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp HHHHHHTTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCeEEEEEeeecCCCCcCCCCCceEecCCCccHHHHHHHHHHHHhhcC
Confidence 88888877778999999999998889999999999988999999999999999885
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=100.00 E-value=6e-47 Score=371.54 Aligned_cols=330 Identities=29% Similarity=0.503 Sum_probs=253.3
Q ss_pred CCCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCC---------CC--c
Q 014151 38 EMGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGG---------YN--S 106 (430)
Q Consensus 38 ~~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~---------~~--~ 106 (430)
+++||+++|.+|++||+||+|.|+|.||+.... +.++++++|+.|+++|+|+||+|++.+.. +. .
T Consensus 1 ~~~~v~~~g~~f~~nG~p~~~~G~N~~~~~~~~----~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~ 76 (344)
T d1qnra_ 1 ASSFVTISGTQFNIDGKVGYFAGTNCYWCSFLT----NHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLS 76 (344)
T ss_dssp CCCCCEEETTEEEETTEESCEEEEECGGGGGCC----CHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECC
T ss_pred CCCcEEEECCEEEECCEEEEEEEEccCCCCcCC----CHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcc
Confidence 368999999999999999999999998877654 68999999999999999999999865311 00 1
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014151 107 LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVK 186 (430)
Q Consensus 107 ~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~ 186 (430)
.+..+..++++.++.+|+++++|+++||+||++||+.|..+.+.+.|..|.. .....||+++..++.++++++
T Consensus 77 ~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 149 (344)
T d1qnra_ 77 ATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFG-------GNATTWYTNTAAQTQYRKYVQ 149 (344)
T ss_dssp TTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHC-------SCTTGGGGCHHHHHHHHHHHH
T ss_pred cccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccccccccccccc-------cccccccCCHHHHHHHHHHHH
Confidence 1223346889999999999999999999999999998877777666666642 334678999999999999999
Q ss_pred HHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCc
Q 014151 187 TVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNP 266 (430)
Q Consensus 187 ~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np 266 (430)
.+++| ||++|+|++|+|+|||..... .......|.++++++||+.||+|+|+++..+........ .
T Consensus 150 ~~~~r--------~~~~p~v~~~~l~NEp~~~~~-~~~~~~~~~~~~~~~ir~~d~~~~v~~~~~~~~~~~~~~-----~ 215 (344)
T d1qnra_ 150 AVVSR--------YANSTAIFAWELGNEPRCNGC-STDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDG-----A 215 (344)
T ss_dssp HHHHH--------HTTCTTEEEEESCBSCCCTTC-CTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCC-----C
T ss_pred HHHHH--------hCCCCceeeeccCCccCCCCC-chhhhhHHHHHHHHHHHhhCCCCEEEEcccccccccccc-----c
Confidence 99999 999999999999999987553 356788999999999999999999999876543221110 0
Q ss_pred cchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCCh
Q 014151 267 EMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEP 346 (430)
Q Consensus 267 ~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~ 346 (430)
..+....+.++......+.+||+++|.|+..|.... .+...++....+.+++ .+|||+|+|||+.... .
T Consensus 216 ~~~~~~~~~d~~~~~~~~~~D~~~~H~Y~~~~~~~~------~~~~~~~~~~~~~~~~-~~kPv~v~EfG~~~~~----~ 284 (344)
T d1qnra_ 216 YPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNY------TWGNGWIQTHAAACLA-AGKPCVFEEYGAQQNP----C 284 (344)
T ss_dssp GGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHTCCS------THHHHHHHHHHHHHHH-TTSCEEEEEECCSSCH----H
T ss_pred cccccccccchhhcccCCCceEEEEeecCcccccch------hHHHHHHHHHHHHHhh-cCCCEEEEecCcCCCC----C
Confidence 112233556777777889999999999997776542 2334556666666665 8999999999987543 1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCC---CccCCCCceEEcCCCccHHHHHHHHHHHHh
Q 014151 347 SLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEG---MEEYNDDFGIVPWERTSTYKLLTEQSCGLG 412 (430)
Q Consensus 347 ~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~---~~~~~dg~~i~~~~~~~~~~~~~~~~~~~~ 412 (430)
.....++ ... ....+.+|+++|+|.+.. ...+.|||++++++ +.+..+|++|+++++
T Consensus 285 ~~~~~~~----~~~----~~~~~~~G~~~W~~~~~~~~g~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~ 344 (344)
T d1qnra_ 285 TNEAPWQ----TTS----LTTRGMGGDMFWQWGDTFANGAQSNSDPYTVWYNS-SNWQCLVKNHVDAIN 344 (344)
T ss_dssp HHHHHHH----HHH----HTSTTEEEEEESCEECBCTTSCBCCCCTTCEETTS-HHHHHHTHHHHHHHC
T ss_pred ccHHHHH----HHH----HhccCcceEEEEEcCcccCCCCccCCCCCEEECCC-ccHHHHHHHHHHhhC
Confidence 1111111 111 112358899999998753 34556999999875 668899999999874
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=4.5e-45 Score=363.05 Aligned_cols=357 Identities=26% Similarity=0.456 Sum_probs=275.8
Q ss_pred CcEEEeCCeEEECCeEEEEEeeeccccccccC--CCCCHHHHHHHHHHHHHcCCCEEEEccccCC------CCCccccCC
Q 014151 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWAFNDG------GYNSLQISP 111 (430)
Q Consensus 40 gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g------~~~~~~~~p 111 (430)
.||+++|++|++||||++++|+|.|+...... ...+.+.++++|+.||++|+|+||+|++.+. .|+.+++.+
T Consensus 2 ~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~ 81 (410)
T d1uuqa_ 2 HFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF 81 (410)
T ss_dssp CCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST
T ss_pred CCEEEECCEEEECCEEEEEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCcccccccccccCCCccccc
Confidence 59999999999999999999999987654332 3457899999999999999999999987543 367788999
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCC----------CCCCCCCCCHHHHHHH
Q 014151 112 GQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIS----------SSNDSFFFDPSIHKYF 181 (430)
Q Consensus 112 g~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~----------~~~~~f~~d~~~~~~~ 181 (430)
|.||+..|+.+|++|++|+++||+||++|+++|..+++.+.|+.|......... .....+++++.+++.+
T Consensus 82 g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (410)
T d1uuqa_ 82 GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEY 161 (410)
T ss_dssp TCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccccccccCCCcCccccccccccccccccccccCHHHHHHH
Confidence 999999999999999999999999999999998888888889988754221100 0123568889999999
Q ss_pred HHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----ChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCC
Q 014151 182 KHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----SGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPK 257 (430)
Q Consensus 182 ~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~ 257 (430)
++.++.+++|.|+++++.++++|+|++|+|.|||.+.... ..+.+..|.++++.+||++||+++|++|..+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~ 241 (410)
T d1uuqa_ 162 RKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSV 241 (410)
T ss_dssp HHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTT
T ss_pred HHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcccccchhhhhHHHHHHHhhhhhcCCCceEeeccccccccc
Confidence 9999999999999999999999999999999999876432 135677899999999999999999999876543221
Q ss_pred CCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhh------hHHHHHHHHHHHHHhhhhcCCCcEE
Q 014151 258 SPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFED------DLKFVTKWMLSHIEDGDKELNKPVF 331 (430)
Q Consensus 258 ~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~------~~~~~~~~l~~~~~~a~~~~gkPv~ 331 (430)
. .+ ..+......+.+||+++|.||..|........ .......+...+...+.+ .+||++
T Consensus 242 ~---------~~-----~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~kPv~ 306 (410)
T d1uuqa_ 242 N---------DM-----QVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQ-LNKPLV 306 (410)
T ss_dssp T---------CH-----HHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HTCCEE
T ss_pred c---------cc-----cchhhhccCCccceEEeecCcccccccccccccccccchhhhhHHHHHHHHHHHhh-cCCCee
Confidence 1 00 12333456688999999999986554322111 112233445555555554 899999
Q ss_pred EEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCcc-----C--------------CC
Q 014151 332 FTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEE-----Y--------------ND 388 (430)
Q Consensus 332 v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~-----~--------------~d 388 (430)
|+|||...... +.....++++++.+++.++++.+.+..++|+++|+|.+.+.+. | ..
T Consensus 307 i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 386 (410)
T d1uuqa_ 307 LEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQG 386 (410)
T ss_dssp EEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTT
T ss_pred eeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCCCCCCCCCCCCCCCCCCCCCCcccCc
Confidence 99999876532 2346788999999999998888887778999999997754321 1 11
Q ss_pred CceEEcCCCccHHHHHHHHHHHHh
Q 014151 389 DFGIVPWERTSTYKLLTEQSCGLG 412 (430)
Q Consensus 389 g~~i~~~~~~~~~~~~~~~~~~~~ 412 (430)
.|+++.. |.++..+|++..++++
T Consensus 387 ~~~~~~~-d~~~~~~~~~~~~~~~ 409 (410)
T d1uuqa_ 387 MYGVFDT-DTSTIAIMKEFNARFQ 409 (410)
T ss_dssp SSCEETT-CHHHHHHHHHHHHHHC
T ss_pred eEEEECC-CCcHHHHHHHHHHhcC
Confidence 2345544 4678899999998875
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=100.00 E-value=7e-34 Score=275.43 Aligned_cols=289 Identities=16% Similarity=0.256 Sum_probs=198.3
Q ss_pred cEEEeCCeEEECCeEEEEEeeeccccccccCC-----CCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcc---ccCCC
Q 014151 41 FVTRNGTHFMLDGKALYVNGWNSYWLMDHAVH-----DYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSL---QISPG 112 (430)
Q Consensus 41 fv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~-----~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~---~~~pg 112 (430)
.|+|+|++|++|||||+++|+|++|..+.... ..+.+.++++|+.||++|+|+||+|+++++...+. ...+.
T Consensus 1 ~~~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~ 80 (350)
T d2c0ha1 1 RLSVSGTNLNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVT 80 (350)
T ss_dssp CEEEETTEEEETTEEECEEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEE
T ss_pred CEEEECCEEEECCEEEEEEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCC
Confidence 37899999999999999999999887654321 13567899999999999999999998876533222 22345
Q ss_pred CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcc
Q 014151 113 QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRK 192 (430)
Q Consensus 113 ~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~ 192 (430)
.+++..++.+|+++++|+++||+||+++|+.+...++...+. ..+++++..++.++++++.|++|
T Consensus 81 ~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~a~r- 145 (350)
T d2c0ha1 81 GIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLN--------------GLMVDTRKLQSYIDHALKPMANA- 145 (350)
T ss_dssp ECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHHH--------------HHHHCHHHHHHHHHHTHHHHHHH-
T ss_pred ccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCcccC--------------cccCCCHHHHHHHHHHHHHHHHH-
Confidence 678899999999999999999999999987643322221111 12456788899999999999999
Q ss_pred CCcccccccCCCceeEEeecCCCCCCCC--------------------------CChHHHHHHHHHHHHHHHhcCCCCEE
Q 014151 193 NTITGVEYRNDPTIFAWELINEPRCMSD--------------------------PSGDTLQDWIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 193 n~~tg~~yk~~p~I~~wel~NEp~~~~~--------------------------~~~~~~~~w~~~~~~~Ir~~dp~~lV 246 (430)
|+++|+|++|+|+|||..... .....+.+|+.+++.+||+.||+++|
T Consensus 146 -------~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~v 218 (350)
T d2c0ha1 146 -------LKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMV 218 (350)
T ss_dssp -------HTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred -------hCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHhCCCceE
Confidence 999999999999999974321 01356789999999999999999999
Q ss_pred EEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC--CCCCcchhhhHHHHHHHHHHHHHhhhh
Q 014151 247 TVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH--WFHDLEFEDDLKFVTKWMLSHIEDGDK 324 (430)
Q Consensus 247 ~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~--w~~~~~~~~~~~~~~~~l~~~~~~a~~ 324 (430)
+++..+....... ....++ +.. ....+......+..|+++.|.|+.. +....... +.....
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~~~------------~~~~~~- 281 (350)
T d2c0ha1 219 TVGSWNMKADTDA-MGFHNL--YSD-HCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFK------------HSFSNF- 281 (350)
T ss_dssp EEEESCGGGBCSS-TTCCBT--TSH-HHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTS------------SCGGGG-
T ss_pred EecccccCcCccc-cccccc--ccc-cccchhhcccccccceeccccCCCCCcchhhhhHH------------HHHHhc-
Confidence 9986543221110 000011 000 0011122335567889999999842 11111100 001223
Q ss_pred cCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 325 ELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 325 ~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
..+||++|+|||........ ... .++.+++ . +.+|+++|++.+.
T Consensus 282 ~~~kPv~igEfg~~~~~~~~----~~~----~~~~~~~----~-~~~G~~~W~~~d~ 325 (350)
T d2c0ha1 282 RLKKPMVIGEFNQEHGAGMS----SES----MFEWAYT----K-GYSGAWTWSRTDV 325 (350)
T ss_dssp CCSSCEEEEECCGGGSTTCC----HHH----HHHHHHH----T-TCSEEEESCSSSS
T ss_pred cCCCcEEEEecCCCCCCCcc----HHH----HHHHHHH----h-CCeEEEEEeeecC
Confidence 38999999999987664221 122 2333332 2 5789999999875
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=3e-32 Score=268.11 Aligned_cols=313 Identities=16% Similarity=0.165 Sum_probs=197.2
Q ss_pred CCCcEEEeCCeEEE-CCeEEEEEeeeccccccccC--CCCCHHHHHHHHHHHHHcCCCEEEEccccC----CC----CCc
Q 014151 38 EMGFVTRNGTHFML-DGKALYVNGWNSYWLMDHAV--HDYSRARVGAMLQAGAKMGLTVCRTWAFND----GG----YNS 106 (430)
Q Consensus 38 ~~gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~--~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~----g~----~~~ 106 (430)
..||++++|++|+. +|++|+++|+|.+....... .......++++|+.||++|+|+||+++... .. ...
T Consensus 2 ~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~ 81 (358)
T d1ecea_ 2 GGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINF 81 (358)
T ss_dssp CCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCC
T ss_pred CCCeEEeeCCEEECCCCCEEEEEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccc
Confidence 57999999999995 99999999999543332211 122345589999999999999999955321 10 011
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014151 107 LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVK 186 (430)
Q Consensus 107 ~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~ 186 (430)
....|..+++..++.||+++++|+++||+|||+||... ++ .....+++++..++.+.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~ 142 (358)
T d1ecea_ 82 YQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPD---CS----------------GQSALWYTSSVSEATWISDLQ 142 (358)
T ss_dssp SSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESB---TT----------------BCCSSSCCSSSCHHHHHHHHH
T ss_pred cccChhhhchhHHHHHHHHHHHHHHCCCceeeeccccc---cc----------------CCCccccCChHHHHHHHHHHH
Confidence 12234456678899999999999999999999998531 10 111234566667888999999
Q ss_pred HHHhccCCcccccccCCCceeEEeecCCCCCCCC----CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCc
Q 014151 187 TVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRL 262 (430)
Q Consensus 187 ~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~ 262 (430)
.|++| |+++|+|++|||+|||..... .....+.+++++++++||+.||+++|+++..+.......
T Consensus 143 ~ia~~--------~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~--- 211 (358)
T d1ecea_ 143 ALAQR--------YKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY--- 211 (358)
T ss_dssp HHHHH--------TTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEEC---
T ss_pred HHHHh--------hcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCccccc---
Confidence 99999 999999999999999987542 123557889999999999999999999875433211000
Q ss_pred ccCccchhhc-cC-cchhhccCCCCcceEEeeecCCCCCCCcch--hh-hHHHHHHHHHHHHHhhhhcCCCcEEEEecCC
Q 014151 263 TVNPEMWASA-LG-SDFIRNSNNDNIDFASVHIYPDHWFHDLEF--ED-DLKFVTKWMLSHIEDGDKELNKPVFFTEYGL 337 (430)
Q Consensus 263 ~~np~~w~~~-~g-~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~--~~-~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~ 337 (430)
.|... .+ .........+..+++++|.|+..+.+.... .. .......+.......+.+ .++||+|+|||.
T Consensus 212 -----~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pv~igEfG~ 285 (358)
T d1ecea_ 212 -----WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQ-NIAPVWLGEFGT 285 (358)
T ss_dssp -----STTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHT-TSSCEEEEECCC
T ss_pred -----cccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHh-cCCeEEEecCCC
Confidence 01100 00 001111122345689999998654332110 00 011222232222223333 789999999998
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcC
Q 014151 338 SNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPW 395 (430)
Q Consensus 338 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~ 395 (430)
...... .....+.++..++..... .....|+++|+|+.+ .++.+++...
T Consensus 286 ~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~gw~~W~~k~~----~~~~~G~~~~ 334 (358)
T d1ecea_ 286 TLQSTT--DQTWLKTLVQYLRPTAQY---GADSFQWTFWSWNPD----SGDTGGILKD 334 (358)
T ss_dssp CCCSHH--HHHHHHHHHHHTCCHHHH---TTSSCEEEESCSCSC----CTTTCCSBCT
T ss_pred CCCCCC--hHHHHHHHHHHHHHHHHh---cccCceEEEEcCCCC----CCCCcceecC
Confidence 766411 111122233333222221 224789999999863 3344566543
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=2.5e-32 Score=263.26 Aligned_cols=257 Identities=14% Similarity=0.146 Sum_probs=175.6
Q ss_pred CcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHH-HHcCCCEEEEccccCCCCCccc-cCCCCCChH
Q 014151 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAG-AKMGLTVCRTWAFNDGGYNSLQ-ISPGQFDER 117 (430)
Q Consensus 40 gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~n~vR~~~~~~g~~~~~~-~~pg~~de~ 117 (430)
..|+|+|++|++||+|++|+|+|.+|....... ..-..+++++.| +++|+|+||+++... ... ..++..++.
T Consensus 3 ~~l~v~G~~i~~nG~~v~l~Gvn~~~~~~~~~~--~~~~~~~~~~~l~~~~g~N~VR~~~~~~----~~~~~~~~~~~~~ 76 (293)
T d1tvna1 3 EKLTVSGNQILAGGENTSFAGPSLFWSNTGWGA--EKFYTAETVAKAKTEFNATLIRAAIGHG----TSTGGSLNFDWEG 76 (293)
T ss_dssp CCEEEETTEEEETTEECCCEEEEECCCCTTSSC--GGGCSHHHHHHHHHHHCCSEEEEEEECC----TTSTTSTTTCHHH
T ss_pred CeEEEECCEEeeCCcEEEEEEeecCCcCCCcCC--CcccCHHHHHHHHHhCCCcEEEEecccc----cccccccccCcHH
Confidence 468999999999999999999998876543221 011123344444 468999999965321 121 234566789
Q ss_pred HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccc
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg 197 (430)
.++.||++|++|.++||+|||++|++- ....++.+.++|+.|++|
T Consensus 77 ~l~~ld~~v~~a~~~gi~vild~h~~~-----------------------------~~~~~~~~~~~w~~~a~r------ 121 (293)
T d1tvna1 77 NMSRLDTVVNAAIAEDMYVIIDFHSHE-----------------------------AHTDQATAVRFFEDVATK------ 121 (293)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSC-----------------------------GGGCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHcCCEEEecCccCC-----------------------------CcccHHHHHHHHHHHHHH------
Confidence 999999999999999999999998520 001246788999999999
Q ss_pred ccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcch
Q 014151 198 VEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDF 277 (430)
Q Consensus 198 ~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df 277 (430)
||++|+|+ |||+|||..... ...+.+++++++++||+.||+++|++++.++... +. .+
T Consensus 122 --~k~~~~V~-~el~NEP~~~~~--~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~------------~~-----~~ 179 (293)
T d1tvna1 122 --YGQYDNVI-YEIYNEPLQISW--VNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD------------VD-----VA 179 (293)
T ss_dssp --HTTCTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTC------------HH-----HH
T ss_pred --hCCCCeEE-EEEecccCCCCc--HHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccc------------cc-----hh
Confidence 99999997 999999987542 4678999999999999999999999975433110 00 00
Q ss_pred hhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHH
Q 014151 278 IRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTIL 357 (430)
Q Consensus 278 ~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~ 357 (430)
.........+++++|.|+.. .. .+...+++.+.+ .++|++|+|||....... ......+++.++
T Consensus 180 ~~~~~~~~~~v~s~H~Y~~~-~~------------~~~~~~~~~~~~-~g~Pv~vgEfG~~~~~~~--~~~~~~~~~~~~ 243 (293)
T d1tvna1 180 SQNPIDRANIAYTLHFYAGT-HG------------QSYRNKAQTALD-NGIALFATEWGTVNADGN--GGVNINETDAWM 243 (293)
T ss_dssp HHSCCCSSSEEEEEEEETTT-CC------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSC--SCCCHHHHHHHH
T ss_pred hcCCccCCCceEEEEeeccc-cc------------hHHHHHHHHHHh-cCCCeEeeccCCcccCCC--CCCCHHHHHHHH
Confidence 01111223457899999863 11 112233344444 799999999998754321 111233444445
Q ss_pred HHHHHHHhcCCCcccceeeeeccC
Q 014151 358 DIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 358 ~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.+.+. .+|+++|+|.+.
T Consensus 244 ~~~~~~------~igw~~W~~~d~ 261 (293)
T d1tvna1 244 AFFKTN------NISHANWALNDK 261 (293)
T ss_dssp HHHHHH------TCCEEEEEESCS
T ss_pred HHHHHh------CCeEEEEEeecC
Confidence 444332 579999999875
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=2.2e-32 Score=263.39 Aligned_cols=279 Identities=14% Similarity=0.131 Sum_probs=183.4
Q ss_pred CcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCCCChHH
Q 014151 40 GFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118 (430)
Q Consensus 40 gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~ 118 (430)
.-|+|+|++|++||+||+|+|+|.+|....... .....+++++.|+ ++|+|+||+++.... . ...-..++..
T Consensus 3 ~~l~v~G~~~~~nG~~v~l~G~n~~~~~~~~~~--~~~~~~~~~~~l~~~~G~N~vR~~~~~~~-~----~~~~~~~~~~ 75 (291)
T d1egza_ 3 EPLSVNGNKIYAGEKAKSFAGNSLFWSNNGWGG--EKFYTADTVASLKKDWKSSIVRAAMGVQE-S----GGYLQDPAGN 75 (291)
T ss_dssp CCEEEETTEEEETTEECCCEEEEEEECCTTSSG--GGGCSHHHHHHHHHTTCCCEEEEEEECSS-T----TSTTTCHHHH
T ss_pred CcEEEECCEEEECCcEEEEEEEecCCcCCCcCC--ccccCHHHHHHHHHhcCCCEEEEeccccc-c----CCcccCcHHH
Confidence 358999999999999999999999886543211 1122345666666 689999999664221 0 0111223678
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
++++|++|++|.++||+|||++|+.- .....+.+.++|+.+++|
T Consensus 76 ~~~ld~vv~~a~~~Giyvild~h~~~-----------------------------~~~~~~~~~~~w~~la~r------- 119 (291)
T d1egza_ 76 KAKVERVVDAAIANDMYAIIGWHSHS-----------------------------AENNRSEAIRFFQEMARK------- 119 (291)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSC-----------------------------GGGGHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHCCCeEeeeeccCC-----------------------------CcccHHHHHHHHHHHHHH-------
Confidence 99999999999999999999987521 112356678999999999
Q ss_pred cccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchh
Q 014151 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFI 278 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~ 278 (430)
||++|+|+ |+|+|||..... .+.+.++.++++++||+.||+++|++++.++.+.. .+. .
T Consensus 120 -yk~~p~v~-~el~NEP~~~~~--~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~----------~~~-------~ 178 (291)
T d1egza_ 120 -YGNKPNVI-YEIYNEPLQVSW--SNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNV----------DEA-------S 178 (291)
T ss_dssp -HTTSTTEE-EECCSCCCSCCT--TTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCH----------HHH-------H
T ss_pred -hCCCccee-eeeccCcCCCcc--hhhHHHHHHHHHHHHHhcCCCcEEEEecCCccccc----------chh-------h
Confidence 99999985 999999987542 45688999999999999999999999754332110 000 0
Q ss_pred hccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHH
Q 014151 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD 358 (430)
Q Consensus 279 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~ 358 (430)
........+++++|.|+.. ... .+....+.+.+ .++||+|+|||+....... .....+++.+++
T Consensus 179 ~~~~~~~n~vys~H~Y~~~-~~~------------~~~~~~~~~~~-~~~Pv~vgEfG~~~~~~~~--~~~~~~~~~~~~ 242 (291)
T d1egza_ 179 RDPINAKNIAYTLHFYAGT-HGE------------SLRNKARQALN-NGIALFVTEWGTVNADGNG--GVNQTETDAWVT 242 (291)
T ss_dssp TSCCCSSSEEEEEEEETTT-CCH------------HHHHHHHHHHH-TTCCEEEEEEESSCTTSCS--CCCHHHHHHHHH
T ss_pred hcccCCCcEEEEecccCCC-Cch------------hHHHHHHHHHH-cCCCeEecccCCcccCCCC--CcCHHHHHHHHH
Confidence 0011234568999999863 110 11222333443 7999999999986543211 111233444444
Q ss_pred HHHHHHhcCCCcccceeeeeccCCCccCCCCceEEcCCC--cc-HHHHHHHHHH
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFGIVPWER--TS-TYKLLTEQSC 409 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~~~~--~~-~~~~~~~~~~ 409 (430)
.+.+ ..+|+++|+|.+. ++++++..++. .+ .-+++++..+
T Consensus 243 ~~~~------~~i~w~~W~~~~~-----~~~~~~~~~~~~~~t~~G~~~k~~~~ 285 (291)
T d1egza_ 243 FMRD------NNISNANWALNDK-----NEGASTYYPDSKNLTESGKKVKSIIQ 285 (291)
T ss_dssp HHHH------TTCCEEEEEECCS-----SSTTCSBCTTSCCBCHHHHHHHHHHH
T ss_pred HHHH------cCCeEEEEeeeCC-----CCCeeeecCCCCCcCHHHHHHHHHHh
Confidence 3332 2579999999853 23345444331 11 2366666554
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=99.97 E-value=7.1e-31 Score=253.63 Aligned_cols=258 Identities=13% Similarity=0.164 Sum_probs=176.0
Q ss_pred CCCcEEEeCCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHH-HHcCCCEEEEccccCCCCCccccCCCCCC
Q 014151 38 EMGFVTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAG-AKMGLTVCRTWAFNDGGYNSLQISPGQFD 115 (430)
Q Consensus 38 ~~gfv~~~g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~n~vR~~~~~~g~~~~~~~~pg~~d 115 (430)
..|+++|+|++|+ .||+||+++|+|.+++.... ...-+++|+.+ +++|+|+||+++..+ ......+
T Consensus 5 ~~g~l~v~g~~ivd~nG~~v~lrGvn~~~~~~~~-----~~~~~~~~~~l~~~~G~N~VR~~~~~~-------~~~~~~~ 72 (300)
T d7a3ha_ 5 EHGQLSISNGELVNERGEQVQLKGMSSHGLQWYG-----QFVNYESMKWLRDDWGINVFRAAMYTS-------SGGYIDD 72 (300)
T ss_dssp HHCSCEEETTEEECTTSCBCCCEEEEESCHHHHG-----GGCSHHHHHHHHHHTCCCEEEEEEESS-------TTSTTTC
T ss_pred cCCeEEEeCCEEECCCCCEEEEEEEeCCCccccc-----ccCCHHHHHHHHHHcCCCEEEEeeEcC-------ccCcccC
Confidence 4589999999999 59999999999987654322 11124555555 579999999976532 1123457
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCc
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTI 195 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~ 195 (430)
+..++.+|++|++|+++||+|||++|+. ++. .....++.+.++|+.+++|
T Consensus 73 ~~~~~~ld~~v~~a~~~Gl~Vild~h~~----~~~----------------------~~~~~~~~~~~~w~~ia~r---- 122 (300)
T d7a3ha_ 73 PSVKEKVKEAVEAAIDLDIYVIIDWHIL----SDN----------------------DPNIYKEEAKDFFDEMSEL---- 122 (300)
T ss_dssp TTHHHHHHHHHHHHHHHTCEEEEEEECS----SSC----------------------STTTTHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEeeeec----CCC----------------------CChhhHHHHHHHHHHHHHH----
Confidence 8999999999999999999999999852 111 0112356778999999999
Q ss_pred ccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCc
Q 014151 196 TGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGS 275 (430)
Q Consensus 196 tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~ 275 (430)
||++|+|+ |+|+|||........+.+..++++++++||++||+++|.++...+.... ..
T Consensus 123 ----yk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~----------~~------ 181 (300)
T d7a3ha_ 123 ----YGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDV----------HH------ 181 (300)
T ss_dssp ----HTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBH----------HH------
T ss_pred ----hCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCccccc----------ch------
Confidence 99999985 9999999876543456789999999999999999999999754331110 00
Q ss_pred chhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHH
Q 014151 276 DFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKT 355 (430)
Q Consensus 276 df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~ 355 (430)
........+++ ++++|.|+.. .. ..+......+.. .++|++|+|||+....... .....+++.
T Consensus 182 ~~~~~~~~~ni-v~~~H~Y~~~-~~------------~~~~~~~~~~~~-~~~Pv~~gEfG~~~~~~~~--~~~~~~~~~ 244 (300)
T d7a3ha_ 182 AADNQLADPNV-MYAFHFYAGT-HG------------QNLRDQVDYALD-QGAAIFVSEWGTSAATGDG--GVFLDEAQV 244 (300)
T ss_dssp HHTSCCSCTTE-EEEEEEETTS-CC------------HHHHHHHHHHHH-TTCCEEEEEEESSCTTSCS--CCCHHHHHH
T ss_pred hhcCCCCCCCE-EEEECCccCc-Cc------------ccHHHHHHHHHh-cCCCEEEeecCCccCCCCC--CcCHHHHHH
Confidence 00011122333 7899999863 11 112223333443 7999999999987543111 112344455
Q ss_pred HHHHHHHHHhcCCCcccceeeeeccC
Q 014151 356 ILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 356 ~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+++.+.+ ..+|+++|++.+.
T Consensus 245 ~~~~~~~------~~igw~~W~~~~~ 264 (300)
T d7a3ha_ 245 WIDFMDE------RNLSWANWSLTHK 264 (300)
T ss_dssp HHHHHHH------TTCCEEEEEESCC
T ss_pred HHHHHHH------cCCeEEEEeCcCC
Confidence 5544433 2579999999754
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=99.97 E-value=2.5e-30 Score=248.52 Aligned_cols=253 Identities=15% Similarity=0.206 Sum_probs=176.6
Q ss_pred CcEEEeCCeEEE-CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHH
Q 014151 40 GFVTRNGTHFML-DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118 (430)
Q Consensus 40 gfv~~~g~~f~~-~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~ 118 (430)
|| +|+|++|+. |||||+++|+|.... +..+..+++|+.||++|+|+||+++.. ++.|+++.
T Consensus 2 ~l-~v~G~~ivd~nG~~~~l~Gvn~~~~-------~~~~~~~~d~~~~~~~G~N~VRl~~~~----------~~~~~~~~ 63 (297)
T d1wkya2 2 GF-YVSGTTLYDANGNPFVMRGINHGHA-------WYKDQATTAIEGIANTGANTVRIVLSD----------GGQWTKDD 63 (297)
T ss_dssp CC-EEETTEEECTTSCBCCCEEEEECGG-------GCGGGHHHHHHHHHTTTCSEEEEEECC----------SSSSCCCC
T ss_pred ce-EEECCEEECCCCCEEEEEEeccCcc-------cCchHHHHHHHHHHHCCCcEEEEeccC----------CCccCccH
Confidence 55 799999996 999999999995321 134568899999999999999996532 24466777
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
+++||++|++|.++||+||+++|.. . + +......+.+.++|+.+++|
T Consensus 64 ~~~ld~~v~~a~~~Gi~vildlh~~-~--~-----------------------~~~~~~~~~~~~~w~~~a~~------- 110 (297)
T d1wkya2 64 IQTVRNLISLAEDNNLVAVLEVHDA-T--G-----------------------YDSIASLNRAVDYWIEMRSA------- 110 (297)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT-T--T-----------------------CCCHHHHHHHHHHHHHTGGG-------
T ss_pred HHHHHHHHHHHHHCCCceEeecccc-c--c-----------------------ccccccHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999852 0 0 22345677788999999999
Q ss_pred cccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchh
Q 014151 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFI 278 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~ 278 (430)
|+++|+|++|++.|||.... ..+.+.++++++.+.||+.||+++|+++..++ +.. ..... ..+....
T Consensus 111 -~~~~p~v~~~~l~NEp~~~~--~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~-~~~--------~~~~~-~~~~~~~ 177 (297)
T d1wkya2 111 -LIGKEDTVIINIANEWFGSW--DGAAWADGYKQAIPRLRNAGLNNTLMIDAAGW-GQF--------PQSIH-DYGREVF 177 (297)
T ss_dssp -TTTCTTTEEEECCTTCCCSS--CHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT-TTB--------THHHH-HHHHHHH
T ss_pred -hcCCCCEEEEeccccccccc--hhhhhhhhhhhhHHHHHhcCCCceEEEecCCc-ccc--------cchhh-hcccccc
Confidence 99999999999999997654 35678899999999999999999999875332 110 00000 0000111
Q ss_pred hccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHH
Q 014151 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD 358 (430)
Q Consensus 279 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~ 358 (430)
.. ......++++|.|+..... . ..+...++...+ .++|++|+|||.....+.. .. +.+++
T Consensus 178 ~~-~~~~~i~y~~H~Y~~~~~~----~-------~~~~~~~~~~~~-~g~Pv~vgEfG~~~~~~~~---~~----~~~~~ 237 (297)
T d1wkya2 178 NA-DPQRNTMFSIHMYEYAGGN----A-------SQVRTNIDRVLN-QDLALVIGEFGHRHTNGDV---DE----STIMS 237 (297)
T ss_dssp HT-CTTCCEEEEEEESTTTSSS----H-------HHHHHHHHHHHT-TTCCEEEEEECSEETTEEC---CH----HHHHH
T ss_pred CC-CcccceeEeeccccCCCCC----h-------hhHHHHHHHHhh-cCCCEEEEeecccCCCCcH---HH----HHHHH
Confidence 11 1223347899999853211 1 122333344444 7999999999987654221 11 22333
Q ss_pred HHHHHHhcCCCcccceeeeeccCC
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
.+.+ ..+|+++|+|.+++
T Consensus 238 ~~~~------~~~gw~~W~~~~~~ 255 (297)
T d1wkya2 238 YSEQ------RGVGWLAWSWKGNG 255 (297)
T ss_dssp HHHH------TTCEEEESCSSCCC
T ss_pred HHHH------cCCeEEEEEEECCC
Confidence 3332 25799999998753
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=99.97 E-value=3.6e-30 Score=252.95 Aligned_cols=265 Identities=18% Similarity=0.305 Sum_probs=183.7
Q ss_pred EEEeeecc-ccccccCCCCCHHH-----HHHHHHHHHHcCCCEEEEccccCCCCCcccc--CCCCCChHHHHHHHHHHHH
Q 014151 57 YVNGWNSY-WLMDHAVHDYSRAR-----VGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI--SPGQFDERVFKALDHVIVE 128 (430)
Q Consensus 57 ~~~G~N~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~--~pg~~de~~l~~lD~~l~~ 128 (430)
+.+|+|+- |+..... ..++. .+++|+.|+++|+|+||+.+. |..+++ .++.++++.+++||++|++
T Consensus 4 ~~rGvNlg~w~~~~~~--~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~----~~~~~~~~~~~~~~~~~~~~ld~~v~~ 77 (340)
T d1ceoa_ 4 FKAGINLGGWISQYQV--FSKEHFDTFITEKDIETIAEAGFDHVRLPFD----YPIIESDDNVGEYKEDGLSYIDRCLEW 77 (340)
T ss_dssp CSEEEECTTSBSSCSS--CCHHHHHHHSCHHHHHHHHHHTCCEEEEEEE----GGGTBCSSSTTCBCHHHHHHHHHHHHH
T ss_pred ccceeeechhhhcccc--cchhhhcccccHHHHHHHHHcCCCEEEeecC----HHHhccCCCCCccCHHHHHHHHHHHHH
Confidence 35799975 5533221 12222 378999999999999999542 444443 4578999999999999999
Q ss_pred HHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeE
Q 014151 129 ARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208 (430)
Q Consensus 129 A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~ 208 (430)
|.++||+|||++|.. .|... .. .....+++++..++.+.++|+.|++| ||++|+|++
T Consensus 78 a~~~gi~vild~H~~---p~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~la~r--------y~~~p~v~~ 134 (340)
T d1ceoa_ 78 CKKYNLGLVLDMHHA---PGYRF--QD----------FKTSTLFEDPNQQKRFVDIWRFLAKR--------YINEREHIA 134 (340)
T ss_dssp HHHTTCEEEEEEEEC---CC--------------------CCTTTCHHHHHHHHHHHHHHHHH--------TTTCCSSEE
T ss_pred HHHcCCEEEEEecCC---Ccccc--cc----------cccccccccHHHHHHHHHHHHHHHHh--------cCCCCcEEE
Confidence 999999999999852 11110 00 12345788999999999999999999 999999999
Q ss_pred EeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcce
Q 014151 209 WELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDF 288 (430)
Q Consensus 209 wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~ 288 (430)
|||.|||.... .+.+.+|+++++++||++||+++|++|..++.+.. .+ ........+++ +
T Consensus 135 ~el~NEP~~~~---~~~~~~~~~~~~~aIR~~dp~~~I~v~g~~~~~~~----------~~------~~~~~~~d~nv-~ 194 (340)
T d1ceoa_ 135 FELLNQVVEPD---STRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPD----------EL------KNLADIDDDYI-V 194 (340)
T ss_dssp EECCSCCCCSS---SHHHHHHHHHHHHHHHHHCSSCCEEEECHHHHCGG----------GG------GGSCCCCCSSE-E
T ss_pred EeeeeecCCCC---HHHHHHHHHHHHHHHHhcCCCcEEEeCCCCcCCch----------hh------hcCCCCCCCCE-E
Confidence 99999998653 57899999999999999999999999864432110 00 00111233455 6
Q ss_pred EEeeecCC--------CCCCC-----------cc----------------------hhhhHHHHHHHHHHHHHhhhhcCC
Q 014151 289 ASVHIYPD--------HWFHD-----------LE----------------------FEDDLKFVTKWMLSHIEDGDKELN 327 (430)
Q Consensus 289 ~s~H~Y~~--------~w~~~-----------~~----------------------~~~~~~~~~~~l~~~~~~a~~~~g 327 (430)
+++|+|.+ .|... .. ...........+....+.+++ .+
T Consensus 195 ~~~H~Y~p~~fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 273 (340)
T d1ceoa_ 195 YNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKLNKELLRKDLKPAIEFREK-KK 273 (340)
T ss_dssp EEEEECCSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEESHHHHHHHHHHHHHHHHH-HC
T ss_pred EEEeccCccccccccccccccccccccccCCCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH-cC
Confidence 89999953 12100 00 000123334444555555565 89
Q ss_pred CcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 328 KPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 328 kPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
+||+|+|||+.... +.+.|.+|++.+++.+.+ ..+|+++|+|.+
T Consensus 274 ~Pv~igEFG~~~~~---~~~~~~~~~~~~~~~~~~------~~igw~~W~~~~ 317 (340)
T d1ceoa_ 274 CKLYCGEFGVIAIA---DLESRIKWHEDYISLLEE------YDIGGAVWNYKK 317 (340)
T ss_dssp CEEEEEEECCCTTS---CHHHHHHHHHHHHHHHHH------TTCEEEESCSBS
T ss_pred CCEEEEccCCcCCC---CHHHHHHHHHHHHHHHHH------cCCcEEEeCCCC
Confidence 99999999987654 457788898877765543 257999999865
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.97 E-value=4e-31 Score=254.87 Aligned_cols=257 Identities=13% Similarity=0.090 Sum_probs=172.9
Q ss_pred CcEEEeCCeEE-ECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHH
Q 014151 40 GFVTRNGTHFM-LDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118 (430)
Q Consensus 40 gfv~~~g~~f~-~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~ 118 (430)
|+ +|+|++|+ .|||||+++|+|.+..... ..+++|+.||++|+|+||+.+... ..+.+..
T Consensus 3 ~l-~v~g~~i~d~nG~~~~lrGvn~~~~~~~--------~~~~~~~~i~~~G~N~VRl~~~~~----------~~~~~~~ 63 (302)
T d1bqca_ 3 GL-HVKNGRLYEANGQEFIIRGVSHPHNWYP--------QHTQAFADIKSHGANTVRVVLSNG----------VRWSKNG 63 (302)
T ss_dssp CS-EEETTEEECTTSCBCCCEEEEECTTTCT--------TCTTHHHHHHHTTCSEEEEEECCS----------SSSCCCC
T ss_pred cE-EEeCCEEECCCCCEEEEEEeecCccccc--------chHHHHHHHHhcCCCEEEEecccc----------cccCcch
Confidence 44 89999999 5999999999996532221 124578999999999999955321 2345566
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
++.+|++|++|.++||+||+++|..|... ...++..++.+.++|++|++|
T Consensus 64 ~~~~~~~v~~a~~~Gi~vildlh~~~~~~-----------------------~~~~~~~~~~~~~~w~~ia~~------- 113 (302)
T d1bqca_ 64 PSDVANVISLCKQNRLICMLEVHDTTGYG-----------------------EQSGASTLDQAVDYWIELKSV------- 113 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEGGGTTTT-----------------------TSTTCCCHHHHHHHHHHTHHH-------
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccc-----------------------CCCchHHHHHHHHHHHHHHHH-------
Confidence 89999999999999999999998743210 012334577889999999999
Q ss_pred cccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchh
Q 014151 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFI 278 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~ 278 (430)
|+++|+|++|+|.|||..........+..+++++++.||+.||+++|+++...+ +.... ...... .+..
T Consensus 114 -~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~-~~~~~-----~~~~~~----~~~~ 182 (302)
T d1bqca_ 114 -LQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNW-GQDWT-----NTMRNN----ADQV 182 (302)
T ss_dssp -HTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTT-TTCTT-----CHHHHH----HHHH
T ss_pred -hcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccc-cccch-----hhhccc----hhcc
Confidence 999999999999999976432223457778899999999999999999985332 11100 000000 0011
Q ss_pred hccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHH
Q 014151 279 RNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD 358 (430)
Q Consensus 279 ~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~ 358 (430)
........+++++|.|+.. ... ..+...++...+ .++|++|+|||....... .+++.+++
T Consensus 183 ~~~~~~~~~vy~~H~Y~~~-~~~-----------~~~~~~~~~~~~-~~~Pv~vgEfG~~~~~~~-------~~~~~~~~ 242 (302)
T d1bqca_ 183 YASDPTGNTVFSIHMYGVY-SQA-----------STITSYLEHFVN-AGLPLIIGEFGHDHSDGN-------PDEDTIMA 242 (302)
T ss_dssp HHTCTTCCEEEEEEESGGG-CSH-----------HHHHHHHHHHHH-HTCCEEEEEECCTTSTTC-------CCHHHHHH
T ss_pred ccCCcccceEEEeeecCCC-CCH-----------HHHHHHHHHhhh-cCCcEEEEecCCcCCCCc-------HHHHHHHH
Confidence 1112223457899999853 211 123333344443 799999999998765421 11233333
Q ss_pred HHHHHHhcCCCcccceeeeeccCC
Q 014151 359 IVYKSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 359 ~~~~~~~~~~~~~G~~~W~~~~~~ 382 (430)
.+.+ . ..|+++|+|.+++
T Consensus 243 ~~~~----~--~~g~~~W~~~~~~ 260 (302)
T d1bqca_ 243 EAER----L--KLGYIGWSWSGNG 260 (302)
T ss_dssp HHHH----H--TCEEEESCSSCCC
T ss_pred HHHH----c--CCeEEEEEecCCC
Confidence 3332 2 4799999998753
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.2e-28 Score=232.19 Aligned_cols=257 Identities=18% Similarity=0.239 Sum_probs=180.7
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHH
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~ 121 (430)
|+|++++|++||||++++|+|.+..........+.+.++++|+.||++|+|+||+|.... +
T Consensus 1 v~v~~~~f~lNG~~~~lrG~~~~~~~~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~~~~~-------------~------ 61 (304)
T d1bhga3 1 VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPY-------------A------ 61 (304)
T ss_dssp EEECSSCEEETTEECCEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTTSCC-------------S------
T ss_pred CEEECCEEEECCEEEEEEeEEcCCCCCccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC-------------h------
Confidence 789999999999999999999764333222335789999999999999999999964311 1
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
+.++++|+++||.|+.++...|.. ...+.++...+.+++.++.+++| ++
T Consensus 62 -~~~~~~cD~~Gilv~~e~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~i~~--------~r 110 (304)
T d1bhga3 62 -EEVMQMCDRYGIVVIDECPGVGLA----------------------LPQFFNNVSLHHHMQVMEEVVRR--------DK 110 (304)
T ss_dssp -STHHHHHSTTCCEEEECCSCCCTT----------------------SSGGGSHHHHHHHHHHHHHHHHH--------HT
T ss_pred -HHHHHHHHhcCCeeeecccccccc----------------------cccccchHHHHHHHHHHHHHHHH--------hc
Confidence 146899999999999987643211 01145788899999999999999 99
Q ss_pred CCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc
Q 014151 202 NDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS 281 (430)
Q Consensus 202 ~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~ 281 (430)
+||+|++|+++||+... ......|.+++.+.||++||+|+|+.++...... ..
T Consensus 111 nhPsI~~w~~~NE~~~~----~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~~-----------------------~~ 163 (304)
T d1bhga3 111 NHPAVVMWSVANEPASH----LESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAA-----------------------DK 163 (304)
T ss_dssp TCSSEEEEEEEESCCTT----SHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTTT-----------------------CS
T ss_pred CCCcHHHhccCCCCCcc----cchhhhhhHHHHHHHHhhCCCCceeeeccccccc-----------------------cc
Confidence 99999999999999864 2456789999999999999999999875221100 01
Q ss_pred CCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------CCChhHHHHHHH
Q 014151 282 NNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------GFEPSLRDKLYK 354 (430)
Q Consensus 282 ~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------~~~~~~r~~~~~ 354 (430)
..+..|++++|.|..........+ .....+......... ..+||++++|+|...... .++++.+..+++
T Consensus 164 ~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~~~~~~~ 239 (304)
T d1bhga3 164 GAPYVDVICLNSYYSWYHDYGHLE---LIQLQLATQFENWYK-KYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLE 239 (304)
T ss_dssp SGGGCSSEEEECCTTSSSSTTCHH---HHHHHHHHHHHHHHH-HSCSCEEEEECCCCCCTTCCCSSCCSSCHHHHHHHHH
T ss_pred cccccccccccccccccccccchh---hhhhhhhHHHHHhhc-cCCCCeEEecchhhcccccCCCcccccCHHHHHHHHH
Confidence 124578889999976322221111 111111111112223 379999999999876431 235666666666
Q ss_pred HHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 355 TILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 355 ~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.....+... + .+.++|.++|++.|.
T Consensus 240 ~~~~~~~~~-~-~~~~~G~~~w~~~D~ 264 (304)
T d1bhga3 240 QYHLGLDQK-R-RKYVVGELIWNFADF 264 (304)
T ss_dssp HHHHHHHHH-T-TTTEEEEEEEESBCB
T ss_pred HHHHHHHHh-C-CCCeEEEEEeeeEec
Confidence 655544332 2 246899999999874
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=99.95 E-value=5.5e-28 Score=238.72 Aligned_cols=270 Identities=14% Similarity=0.166 Sum_probs=171.6
Q ss_pred CCCCcEEEeCCeEEE--CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHH-cCCCEEEEccccCCCCCccccCCCC
Q 014151 37 PEMGFVTRNGTHFML--DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAK-MGLTVCRTWAFNDGGYNSLQISPGQ 113 (430)
Q Consensus 37 ~~~gfv~~~g~~f~~--~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~n~vR~~~~~~g~~~~~~~~pg~ 113 (430)
.+-.+|+|+|+++++ +|+||+++|+|.++....+ + -.-+++++.|++ +|+|+||+.+. .++.+..
T Consensus 14 ~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~-~----~~~~~~~~~l~~~~G~N~VRlp~~-------~~~~~~~ 81 (357)
T d1g01a_ 14 GALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFG-E----IVNENAFVALSNDWGSNMIRLAMY-------IGENGYA 81 (357)
T ss_dssp CSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHG-G----GCSHHHHHHHHTTSCCSEEEEEEE-------SSSSSTT
T ss_pred cCCCeEEEcCeEEEECCCCCEEEEEEEecCcchhcc-c----ccCHHHHHHHHHhcCCCEEEEeee-------ecCCCCc
Confidence 466889999998765 7999999999987654332 1 112467777875 89999999542 1234456
Q ss_pred CChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccC
Q 014151 114 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKN 193 (430)
Q Consensus 114 ~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n 193 (430)
++++.+++||++|++|.++||+|||++|.. .++. .++...+.+.++|+.|++|
T Consensus 82 ~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~---~~~~----------------------~~~~~~~~~~~~W~~iA~r-- 134 (357)
T d1g01a_ 82 TNPEVKDLVYEGIELAFEHDMYVIVDWHVH---APGD----------------------PRADVYSGAYDFFEEIADH-- 134 (357)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCEEEEEEECC---SSSC----------------------TTSGGGTTHHHHHHHHHHH--
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEeeccc---CCCC----------------------CChhhhhhhHHHHHHHHHH--
Confidence 788999999999999999999999999852 1110 0111223456789999999
Q ss_pred CcccccccCCCc--eeEEeecCCCCCCCCC------C---hHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCc
Q 014151 194 TITGVEYRNDPT--IFAWELINEPRCMSDP------S---GDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRL 262 (430)
Q Consensus 194 ~~tg~~yk~~p~--I~~wel~NEp~~~~~~------~---~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~ 262 (430)
|+++|+ +++|||.|||...... . ...++.+++++++.||+.+++++|..+ ..+ +..
T Consensus 135 ------y~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~-~~w-~~~----- 201 (357)
T d1g01a_ 135 ------YKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGN-PNW-SQR----- 201 (357)
T ss_dssp ------HTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECC-HHH-HTC-----
T ss_pred ------HhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCceEEEec-CCc-ccc-----
Confidence 999984 6889999999865421 1 245677889999999999877665433 222 110
Q ss_pred ccCccchhhccCcchhhccCCCCcceEEeeecCCCCCC-----CcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCC
Q 014151 263 TVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFH-----DLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGL 337 (430)
Q Consensus 263 ~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~-----~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~ 337 (430)
+ .. ........+++ ++++|+|+..... ...... .....+....+.+.+ .++||+|||||.
T Consensus 202 ---~-~~------~~~~~~~~~nv-vys~H~Y~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~g~Pv~vgEfG~ 266 (357)
T d1g01a_ 202 ---P-DL------SADNPIDAENI-MYSVHFYTGSHGASHIGYPEGTPS---SERSNVMANVRYALD-NGVAVFATEWGT 266 (357)
T ss_dssp ---H-HH------HHHSCCSSSSE-EEEEEEETTTSCCCCCCCCTTCCG---GGCCCHHHHHHHHHH-TTCCEEEEEEES
T ss_pred ---c-hh------cccccCCCCCE-EEEEEEecCccCCccCCCCcccch---HHHHHHHHHHHHHHH-cCCCEEEEecCC
Confidence 0 00 00111233555 6799999753211 110000 011123334444444 799999999998
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 338 SNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 338 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
...... ... ...+.+.+++.+.+ ..+|+.+|++.+.
T Consensus 267 ~~~~~~-~~~-~~~~~~~~~~~~~~------~~isw~~W~~~~~ 302 (357)
T d1g01a_ 267 SQANGD-GGP-YFDEADVWLNFLNK------HNISWANWSLTNK 302 (357)
T ss_dssp SBTTTB-SCC-CHHHHHHHHHHHHH------TTCCEEEEEECCS
T ss_pred cCCCCC-CCc-CHHHHHHHHHHHHH------cCCceEEEeCcCC
Confidence 764311 011 12233344443322 3689999999863
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=1.6e-26 Score=224.04 Aligned_cols=263 Identities=19% Similarity=0.202 Sum_probs=174.4
Q ss_pred EEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCE
Q 014151 58 VNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVR 135 (430)
Q Consensus 58 ~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~ 135 (430)
++|+|........ .+....+++|+.|+++|+|+||+.+. |..+++. |..++++.|++||++|++|.++||+
T Consensus 4 ~~G~n~~~~~~~~---~~~~~~e~d~~~l~~~G~n~vRlpv~----~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~ 76 (325)
T d1vjza_ 4 WRGFNLLEAFSIK---STGNFKEEDFLWMAQWDFNFVRIPMC----HLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIH 76 (325)
T ss_dssp CEEEECCTTSSTT---CCCCCCHHHHHHHHHTTCCEEEEEEE----GGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCE
T ss_pred ccceehhhhhhhc---ccCCCCHHHHHHHHHcCCCEEEeccc----HHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCc
Confidence 6799965433222 12345688999999999999999542 4455553 5678999999999999999999999
Q ss_pred EEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC-CceeEEeecCC
Q 014151 136 LLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND-PTIFAWELINE 214 (430)
Q Consensus 136 vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I~~wel~NE 214 (430)
|||++|.. +|...-.. ......++.++..++.+..+|+.+++| |+++ +.|++|||+||
T Consensus 77 vildlH~~----pg~~~~~~---------~~~~~~~~~~~~~~~~~~~~w~~~a~~--------~~~~~~~i~~~el~NE 135 (325)
T d1vjza_ 77 ICISLHRA----PGYSVNKE---------VEEKTNLWKDETAQEAFIHHWSFIARR--------YKGISSTHLSFNLINE 135 (325)
T ss_dssp EEEEEEEE----TTEESCTT---------SCCSSCTTTCHHHHHHHHHHHHHHHHH--------HTTSCTTTEEEECSSC
T ss_pred EEEeeccc----cccccCcc---------cccccccccchhhHHHHHHHHHHHHHH--------hcccceeEEeeecccc
Confidence 99999852 11110000 023455688899999999999999999 9976 56899999999
Q ss_pred CCCCCC--CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEee
Q 014151 215 PRCMSD--PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVH 292 (430)
Q Consensus 215 p~~~~~--~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H 292 (430)
|..... ...+.+.+++++++++||+.||+++|++|..++.+...+ ....+.+ .+++|
T Consensus 136 P~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v~v~g~~~~~~~~~--------------------~~~~~~~-~~~~~ 194 (325)
T d1vjza_ 136 PPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPVD--------------------DLTIENT-VQSCR 194 (325)
T ss_dssp CCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHHHHTBCCT--------------------TCCCSSE-EEEEE
T ss_pred CCCCccccchhhhhhhHHHHHHHHHhccCCCcEEEecCCccccccCC--------------------cccccce-eeeec
Confidence 986532 245678889999999999999999999986443221110 0112222 34555
Q ss_pred ecCC--------CCCCCc-----ch------h--hhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHH
Q 014151 293 IYPD--------HWFHDL-----EF------E--DDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDK 351 (430)
Q Consensus 293 ~Y~~--------~w~~~~-----~~------~--~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~ 351 (430)
.|.. .|.... .. . .........+....+ ..+ .++||+|||||+.... +.+.+.+
T Consensus 195 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~Pv~~gEfG~~~~~---~~~~~~~ 269 (325)
T d1vjza_ 195 GYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIK-LRQ-KGIEVFCGEMGAYNKT---PHDVVLK 269 (325)
T ss_dssp ECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHHG-GGG-GTCEEEEEEECCCTTS---CHHHHHH
T ss_pred ccccccccccccccccccccccCCCCccccccccccHHHHHHHHHHHHH-HHh-cCCCEEEeeccCcCCC---CcHHHHH
Confidence 5531 111100 00 0 001111111222222 222 6899999999985543 4677788
Q ss_pred HHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 352 LYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
|++.+++.+.+ ...|+++|+|..
T Consensus 270 ~~~~~l~~~~~------~g~g~~~W~~~~ 292 (325)
T d1vjza_ 270 WLEDLLEIFKT------LNIGFALWNFRG 292 (325)
T ss_dssp HHHHHHHHHHH------TTCEEEESCSBS
T ss_pred HHHHHHHHHHH------cCCeEEEEcCCC
Confidence 88888765543 256999999975
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=99.95 E-value=1.7e-26 Score=223.48 Aligned_cols=278 Identities=14% Similarity=0.108 Sum_probs=176.4
Q ss_pred eEEEEEeeeccccccccCC-C--CCHH---HHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHH
Q 014151 54 KALYVNGWNSYWLMDHAVH-D--YSRA---RVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHV 125 (430)
Q Consensus 54 ~~~~~~G~N~~~~~~~~~~-~--~~~~---~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~ 125 (430)
|+|+|+|+|..-..+.... + .... ..+.+|+.++++|+|+||+.+ .|..+++. ++.++++.+++||++
T Consensus 2 ~~~~~~Gvn~~G~e~~~~~~~g~~~~~~~~~t~~di~~l~~~G~N~VRlPv----~~~~~~~~~~~~~~~~~~~~~l~~~ 77 (305)
T d1h1na_ 2 KVFQWFGSNESGAEFGSQNLPGVEGKDYIWPDPNTIDTLISKGMNIFRVPF----MMERLVPNSMTGSPDPNYLADLIAT 77 (305)
T ss_dssp CSSSEEEEEECCTTCSTTSSSCCBTTTBCCCCHHHHHHHHHTTCCEEEEEE----CHHHHSCSSTTSCCCHHHHHHHHHH
T ss_pred CceeEEEEEccccccCCCCCCCccCCCcccCCHHHHHHHHHCCCCEEEeee----eHHHhccCCCCCccCHHHHHHHHHH
Confidence 6789999995433221110 0 0010 136889999999999999954 24445543 467899999999999
Q ss_pred HHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 126 IVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 126 l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
|++|.++||+|||++|+....++. ...+ .+.+.++|++|++| |+++|.
T Consensus 78 v~~a~~~gl~vIlD~H~~~~~~~~---------------------~~~~---~~~~~~~W~~ia~~--------~~~~~~ 125 (305)
T d1h1na_ 78 VNAITQKGAYAVVDPHNYGRYYNS---------------------IISS---PSDFETFWKTVASQ--------FASNPL 125 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTEETTE---------------------ECCC---HHHHHHHHHHHHHT--------STTCTT
T ss_pred HHHHHhcCCeEEEecccCCccccc---------------------cccc---HHHHHHHHHHHHHH--------hCCCCe
Confidence 999999999999999873211100 0112 35688999999999 999998
Q ss_pred eeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcC-CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc-CC
Q 014151 206 IFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSID-KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS-NN 283 (430)
Q Consensus 206 I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~d-p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~-~~ 283 (430)
| +|||+|||... ..+.+.++.+++.++||+.+ |+++|.++..++.... .|.... ..+.... ..
T Consensus 126 v-~~el~NEP~~~---~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~~~----------~~~~~~-~~~~~~~~~~ 190 (305)
T d1h1na_ 126 V-IFDTDNEYHDM---DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAW----------TWTNVN-DNMKSLTDPS 190 (305)
T ss_dssp E-EEECCSCCCSS---CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBST----------THHHHS-GGGGGCCCTT
T ss_pred e-EEEeccCCCCc---cHHHHHHHHHHHHHHHHhcCCCCCEEEECCCcccccc----------cccccC-cccccCCCCC
Confidence 8 59999999743 35788999999999999998 5788888764432110 111100 0111100 11
Q ss_pred CCcceEEeeecCCCCCCCcchh-hhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHH
Q 014151 284 DNIDFASVHIYPDHWFHDLEFE-DDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYK 362 (430)
Q Consensus 284 ~~iD~~s~H~Y~~~w~~~~~~~-~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~ 362 (430)
+++ ++++|.|.+...+..... ........++......+++ .|+|++|||||.... ..+..+++.+++.+.+
T Consensus 191 ~~~-v~s~H~Y~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~g~p~~igEfG~~~~------~~~~~~~~~~~~~~~~ 262 (305)
T d1h1na_ 191 DKI-IYEMHQYLDSDGSGTSATCVSSTIGQERITSATQWLRA-NGKKGIIGEFAGGAD------NVCETAITGMLDYMAQ 262 (305)
T ss_dssp CCE-EEEEEEECSTTSSSCCSCCSCTTHHHHHHHHHHHHHHH-TTCCEEEEEEECCSS------HHHHHHHHHHHHHHHT
T ss_pred CCE-EEEEEeCCCCCCCCccccccccchHHHHHHHHHHHHHH-cCCcEEEEcCCCCCC------CcHHHHHHHHHHHHHH
Confidence 234 789999975322111000 0012234455555555665 899999999997543 2345666666654432
Q ss_pred HHhcCCCcccceeeeeccCCCccCC-CCceEEcCCC
Q 014151 363 SAKRKRSGAGALIWQLFVEGMEEYN-DDFGIVPWER 397 (430)
Q Consensus 363 ~~~~~~~~~G~~~W~~~~~~~~~~~-dg~~i~~~~~ 397 (430)
+ +...+|+.+|+.++. |+ +-|++.+.++
T Consensus 263 ~---~~~~~gw~~W~~g~~----w~~y~~s~~p~~~ 291 (305)
T d1h1na_ 263 N---TDVWTGAIWWAAGPW----WGDYIFSMEPDNG 291 (305)
T ss_dssp C---TTTEEEEEEEEECTT----CTTCTTCCCTTTC
T ss_pred c---CCcceEEEEecCCCC----CCCCcccccCCCC
Confidence 2 234688999998652 42 3355665543
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.91 E-value=2.5e-24 Score=212.28 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=143.3
Q ss_pred CCcEEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHH
Q 014151 39 MGFVTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERV 118 (430)
Q Consensus 39 ~gfv~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~ 118 (430)
+.||+.++..|++|||||++.|.+.|+.... .++.++++|+.||++|+|+||+++| |..++|+||+||.+.
T Consensus 3 ~~~v~~d~~~~~~~G~~~~~~~~~~h~~r~~-----~~~~w~~~l~~mk~~G~n~vr~~~~----W~~~ep~~g~~df~~ 73 (354)
T d1tg7a5 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLP-----VASLYIDIFEKVKALGFNCVSFYVD----WALLEGNPGHYSAEG 73 (354)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSC-----CGGGHHHHHHHHHTTTCCEEEEECC----HHHHCSBTTBCCCCG
T ss_pred cceEEEeCCEEEECCEEEEEEEEecCCCCCC-----CHHHHHHHHHHHHHcCCCEEEEecc----hhccCCCCCcccccc
Confidence 4589999999999999999999998765432 3578999999999999999999887 777899999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
++.||++|++|+++||+||+.+...+........++.|..... .....++|..++..+++++.+++| ....
T Consensus 74 ~~~l~~~l~~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~---~~~~ 144 (354)
T d1tg7a5 74 IFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVD------GILRTSDEAYLKATDNYASNIAAT---IAKA 144 (354)
T ss_dssp GGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCS------SCTTSSCHHHHHHHHHHHHHHHHH---HHHT
T ss_pred hhhHHHHHHHHHHcCCEEEEcCCCCcCcccccCCCCcccccCC------CcccCCCHHHHHHHHHHHHHHHHH---HHHH
Confidence 9999999999999999999987654322112233566764321 122346788888888888888877 2334
Q ss_pred cccCCCceeEEeecCCCCCCCCC-ChHHHHHHHHHHHHHHHhcCCCCEEEE
Q 014151 199 EYRNDPTIFAWELINEPRCMSDP-SGDTLQDWIDEMSAFVKSIDKKHLVTV 248 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~-~~~~~~~w~~~~~~~Ir~~dp~~lV~~ 248 (430)
.|+|+|+|++|++.||....... .....+++++.+.+..|+.+...++..
T Consensus 145 ~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 195 (354)
T d1tg7a5 145 QITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFIS 195 (354)
T ss_dssp BGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred HhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcccceEe
Confidence 58999999999999998754221 111223444445555667777766554
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=99.91 E-value=1.5e-22 Score=201.11 Aligned_cols=262 Identities=16% Similarity=0.149 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHcCCCEEEEccccCCCCCcc-ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhh
Q 014151 78 RVGAMLQAGAKMGLTVCRTWAFNDGGYNSL-QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNW 156 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~-~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W 156 (430)
..+++|+.||++|+|+||+.+ .|..+ .+.|+.++++.|+++|++|++|.++||+|||++|+. .+...
T Consensus 62 ~t~~~i~~ik~~Gfn~vRiPv----~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~---~~~~~----- 129 (380)
T d1edga_ 62 TTKQMIDAIKQKGFNTVRIPV----SWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHD---VDKVK----- 129 (380)
T ss_dssp CCHHHHHHHHHHTCCEEEECC----CCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSC---BCTTT-----
T ss_pred ccHHHHHHHHHcCCCEEEEcc----cHHHhcCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEecccC---CCCCc-----
Confidence 457899999999999999955 35554 345678999999999999999999999999999863 11110
Q ss_pred hhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCC--------------
Q 014151 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPS-------------- 222 (430)
Q Consensus 157 ~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~-------------- 222 (430)
......+..++.++.|.++|+++++| ||+.|.+++||++|||.......
T Consensus 130 ---------~~~~~~~~~~~~~~~~~~~W~qiA~~--------fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~ 192 (380)
T d1edga_ 130 ---------GYFPSSQYMASSKKYITSVWAQIAAR--------FANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDS 192 (380)
T ss_dssp ---------SBCSSGGGHHHHHHHHHHHHHHHHHH--------TTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHH
T ss_pred ---------ccCCcccCcHHHHHHHHHHHHHHHHh--------hcCCCceEEEeecccccccCCccccccccccccHHHH
Confidence 00112244577899999999999999 99999999999999998653210
Q ss_pred hHHHHHHHHHHHHHHHhcC---CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc-cCCCCcceEEeeecCCC-
Q 014151 223 GDTLQDWIDEMSAFVKSID---KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN-SNNDNIDFASVHIYPDH- 297 (430)
Q Consensus 223 ~~~~~~w~~~~~~~Ir~~d---p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~-~~~~~iD~~s~H~Y~~~- 297 (430)
.+.+.++.+.+..+||+.+ |+++|.++.-.. +.. ..+.. ....... .....--++++|+|.+.
T Consensus 193 ~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~-~~~---------~~~~~--~~~~p~d~~~~~~~li~s~H~Y~p~~ 260 (380)
T d1edga_ 193 INCINQLNQDFVNTVRATGGKNASRYLMCPGYVA-SPD---------GATND--YFRMPNDISGNNNKIIVSVHAYCPWN 260 (380)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGG-CHH---------HHHST--TCCCCCCCTTCCSCEEEEEECCCSHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEeCCCcc-CCc---------cccch--hhcccccccCCCCCEEEEEeecCccc
Confidence 1346678888899999875 667777753111 100 00000 0000000 01112237899999641
Q ss_pred -------------CCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Q 014151 298 -------------WFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 298 -------------w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 364 (430)
|... ...........+....+...+ .|.||+|||||+.... +.+.|..|++.+.+.+.+
T Consensus 261 f~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~-~giPviiGEfG~~~~~---~~~~r~~~~~~~~~~a~~-- 332 (380)
T d1edga_ 261 FAGLAMADGGTNAWNIN--DSKDQSEVTWFMDNIYNKYTS-RGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAKA-- 332 (380)
T ss_dssp HHTSCGGGTCCCCCCTT--CHHHHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHH--
T ss_pred cccccCCcCCCCccccC--ccccHHHHHHHHHHHHHHHHh-cCceEEEecccCcCCC---ChHHHHHHHHHHHHHHHH--
Confidence 1111 011111122223333333443 7899999999997664 356788888877654433
Q ss_pred hcCCCcccceeeeeccCCCccCCCCceEEc
Q 014151 365 KRKRSGAGALIWQLFVEGMEEYNDDFGIVP 394 (430)
Q Consensus 365 ~~~~~~~G~~~W~~~~~~~~~~~dg~~i~~ 394 (430)
..+++++|.....+ ...+.|+++-
T Consensus 333 ----~gi~~~~Wdn~~~~--~~~~~fg~~d 356 (380)
T d1edga_ 333 ----RGILCILWDNNNFS--GTGELFGFFD 356 (380)
T ss_dssp ----TTCEEEECCCCCCS--SSSCCCCCEE
T ss_pred ----cCCcEEEECCCCCC--CCccCcceee
Confidence 25689999654321 1235577653
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.90 E-value=3.7e-23 Score=198.68 Aligned_cols=246 Identities=16% Similarity=0.160 Sum_probs=162.6
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHH
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~ 121 (430)
|+|+|++|++||||+++.|+|.+..........+.+.++++|+.||++|+|+||++.... +
T Consensus 1 i~v~g~~f~LNGk~~~l~Gv~~h~~~p~~G~a~~~~~~~~di~l~k~~G~N~iR~~h~p~-------------~------ 61 (297)
T d1yq2a5 1 VRIVGDQFLVNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPP-------------H------ 61 (297)
T ss_dssp EEEETTEEEETTEECCEEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTSCC-------------C------
T ss_pred CEEECCEEEECCEEEEEeeeEcCCcCcccCcCCCHHHHHHHHHHHHHCCCCEEEccCCCC-------------h------
Confidence 789999999999999999999763322222345789999999999999999999954311 1
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
++++++|++.||+|+..+...|.... .+ ........+++.++.+++.++.+|.| ++
T Consensus 62 -~~~~d~cD~~Gilv~~e~~~~~~~~~------~~---------~~~~~~~~~~~~~~~~~~~~~emV~r--------~~ 117 (297)
T d1yq2a5 62 -PRLLDLADEMGFWVILECDLETHGFE------AG---------GWVENPSDVPAWRDALVDRMERTVER--------DK 117 (297)
T ss_dssp -HHHHHHHHHHTCEEEEECSCBCGGGT------TT---------TTTTCGGGCGGGHHHHHHHHHHHHHH--------HT
T ss_pred -HHHHHHHHhcCCEEEEeecccccccc------cc---------CccCCccccHHHHHHHHHHHHHHHHH--------hC
Confidence 36799999999999988765332110 00 11122345678899999999999999 99
Q ss_pred CCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc
Q 014151 202 NDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS 281 (430)
Q Consensus 202 ~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~ 281 (430)
|||+|++|.++||+... .+.+++...+|++||+++|+.++... +.. . + .... ...
T Consensus 118 NHPSIi~W~~gNE~~~~---------~~~~~~~~~~k~~D~tRp~~~~~~~~-~~~-~-----~--~~~~-------~~~ 172 (297)
T d1yq2a5 118 NHPSIVMWSLGNESGTG---------SNLAAMAAWAHARDSSRPVHYEGDYT-GAY-T-----D--VYSR-------MYS 172 (297)
T ss_dssp TCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECTTCTT-CSS-C-----S--SEEE-------ESC
T ss_pred CCCceEeecccccCCch---------HHHHHHHHHHHHhccCCcccccCccC-Ccc-c-----e--eecc-------ccC
Confidence 99999999999998753 34678889999999999999764321 100 0 0 0000 001
Q ss_pred CCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHH
Q 014151 282 NNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVY 361 (430)
Q Consensus 282 ~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~ 361 (430)
..+.+|+++.+.|....... .. ..... ..+||++++|++........ ....+ .+.+.
T Consensus 173 ~~~~~d~~~~~~~~~~~~~~-~~--------------~~~~~-~~~kp~~~~e~~~~~~~~~~---~~~~~----~~~~~ 229 (297)
T d1yq2a5 173 SIPETDSIGRNDSHALLLGC-DS--------------AESAR-QRTKPFILCEYVHAMGNGPG---AMDQY----EALVD 229 (297)
T ss_dssp CHHHHHHHHCSSCCCCCTTC-CH--------------HHHHH-HTTSCEEEEEESCCCSSCCC---CHHHH----HHHHH
T ss_pred Chhhhhhhhhcccccchhcc-ch--------------hhhcc-cCCCCcceecccccccCCcc---cHHHH----HHHHh
Confidence 12345655555444321111 00 01112 27899999999986654221 11222 22222
Q ss_pred HHHhcCCCcccceeeeeccCC
Q 014151 362 KSAKRKRSGAGALIWQLFVEG 382 (430)
Q Consensus 362 ~~~~~~~~~~G~~~W~~~~~~ 382 (430)
+ .+..+|.++|++.|.+
T Consensus 230 ~----~~~~~G~~vW~~~D~~ 246 (297)
T d1yq2a5 230 K----YPRLHGGFVWEWRDHG 246 (297)
T ss_dssp H----CTTEEEEEESCSBCCC
T ss_pred h----CCCcccceEeeeeeeh
Confidence 2 3468999999999864
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=99.90 E-value=4.3e-22 Score=198.94 Aligned_cols=147 Identities=17% Similarity=0.225 Sum_probs=115.6
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCC-CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG-QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAW 158 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg-~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~ 158 (430)
++||+.||++|+|+||+.+. |..+++.++ .|++..++.||++|++|+++||+|||+||.. .|+... +.
T Consensus 71 ~~D~~~i~~~G~N~VRiPv~----~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~---pg~~~~---~~- 139 (394)
T d2pb1a1 71 EQDFKQISNLGLNFVRIPIG----YWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGA---PGSQNG---FD- 139 (394)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEEC---TTCSSC---CG-
T ss_pred HHHHHHHHHCCCCEEEEEec----HHHhcCCCCCccchhHHHHHHHHHHHHHHCCcEEEEEeecc---CCcccC---cC-
Confidence 57899999999999999542 333444443 4778889999999999999999999999963 233211 11
Q ss_pred hhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC---ceeEEeecCCCCCCCCCChHHHHHHHHHHHH
Q 014151 159 EEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP---TIFAWELINEPRCMSDPSGDTLQDWIDEMSA 235 (430)
Q Consensus 159 ~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p---~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~ 235 (430)
..| .....+++++..++.+.++|+.|++| |+++| +|++|||.|||..... ..+.+.+|++++.+
T Consensus 140 ~~g----~~~~~~~~~~~~~~~~~~~~~~ia~~--------~~~~~~~~~v~g~el~NEP~~~~~-~~~~~~~~~~~~~~ 206 (394)
T d2pb1a1 140 NSG----LRDSYNFQNGDNTQVTLNVLNTIFKK--------YGGNEYSDVVIGIELLNEPLGPVL-NMDKLKQFFLDGYN 206 (394)
T ss_dssp GGS----STTCCCTTSTTHHHHHHHHHHHHHHH--------HSSGGGTTTEEEEESCSCCCGGGS-CHHHHHHHHHHHHH
T ss_pred CcC----ccCccccccHHHHHHHHHHHHHHHHH--------HccCCCCCceEEEeecccCCcccc-cHHHHHHHHHHHHH
Confidence 011 12344678888999999999999999 99886 6999999999976432 35789999999999
Q ss_pred HHHhcCCCCEEEEcc
Q 014151 236 FVKSIDKKHLVTVGL 250 (430)
Q Consensus 236 ~Ir~~dp~~lV~~G~ 250 (430)
+||+.||+++|.++.
T Consensus 207 ~IR~~~~~~~I~i~~ 221 (394)
T d2pb1a1 207 SLRQTGSVTPVIIHD 221 (394)
T ss_dssp HHHHTTCCCCEEEEC
T ss_pred HHHHhCCCCeEEEcC
Confidence 999999999999873
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.89 E-value=9e-23 Score=207.11 Aligned_cols=302 Identities=13% Similarity=0.172 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .|.+|+++++.++++|+.+.++||+++++|++ |+ .
T Consensus 56 ~y~~y~eDi~l~~~lG~~~yRf---Si-~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H-~d-------l 123 (447)
T d1e4ia_ 56 SYHRYEEDIRLMKELGIRTYRF---SV-SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYH-WD-------L 123 (447)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhHhhHHHHHHHHHhCCCEEEc---cC-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeec-cc-------c
Confidence 3678999999999999999998 33 59999997 58999999999999999999999999999986 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------C---C
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------D---P 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~---~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.++++ |++ .|-.|.+.|||.+.. . .
T Consensus 124 P~~l~~~gG---------w~n~~~~~~F~~Ya~~v~~~--------fgd--rV~~W~TiNEP~~~~~~gy~~G~~~Pg~~ 184 (447)
T d1e4ia_ 124 PQALQDAGG---------WGNRRTIQAFVQFAETMFRE--------FHG--KIQHWLTFNEPWCIAFLSNMLGVHAPGLT 184 (447)
T ss_dssp BHHHHHTTT---------TSSTHHHHHHHHHHHHHHHH--------TBT--TBCEEEEEECHHHHHHHHHTSCCSTTCCC
T ss_pred chhhhcCCC---------CCCHHHHHHHHHHHHHHHHH--------hCC--ccceEEecCCCceeeecccccccccCccc
Confidence 678776554 88999999999999999999 988 588999999997521 0 1
Q ss_pred ChHH-------HHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCcch-
Q 014151 222 SGDT-------LQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGSDF- 277 (430)
Q Consensus 222 ~~~~-------~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~df- 277 (430)
+... +..-.......||+..|+..|.+-....+...... ++. .|.- ..| ++
T Consensus 185 ~~~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi~~~~~~~~p~~~----~~~~~~aa~~~~~~~~~~fldpl~~G-~yP 259 (447)
T d1e4ia_ 185 NLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPYST----SEEDKAACARTISLHSDWFLQPIYQG-SYP 259 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEECBCCCEEESSS----CHHHHHHHHHHHHHHTHHHHHHHHHS-SCC
T ss_pred chhhHHHhHHHHHHHHHHHHHHHHHhhhcceeeeeeccccccCCCC----chhHHHHHHHHHHHhcccccchhhcC-cCc
Confidence 1111 11112344567888888877765432211100000 000 0100 011 00
Q ss_pred -------------------hhccCCCCcceEEeeecCCCC---CCCc----------chh-hh--HHHHHHHHHHHHHhh
Q 014151 278 -------------------IRNSNNDNIDFASVHIYPDHW---FHDL----------EFE-DD--LKFVTKWMLSHIEDG 322 (430)
Q Consensus 278 -------------------~~~~~~~~iD~~s~H~Y~~~w---~~~~----------~~~-~~--~~~~~~~l~~~~~~a 322 (430)
........+||+++++|.... .+.. ..+ .. .+.....+...++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~d~~~i~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~td~gw~i~P~gl~~~L~~~ 339 (447)
T d1e4ia_ 260 QFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHYL 339 (447)
T ss_dssp HHHHHHHHHTTCCCCCCTTHHHHHTCCCSEEEEECCCCEEEEECTTSTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHG
T ss_pred HHHHHHHHhcCCccCCCHHHHHhhcCCccceeeccccceeeecCcccccccccCCCCCCcccccceeecchhHHHHHHHH
Confidence 000012357999999997421 0000 000 00 000112233333434
Q ss_pred hhcCCCcEEEEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEc
Q 014151 323 DKELNKPVFFTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVP 394 (430)
Q Consensus 323 ~~~~gkPv~v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~ 394 (430)
.+..++||+|+|.|...... ...+..|.+|++..+..+.++++++..+.|+++|++.|+ .+|..||+ ++.
T Consensus 340 ~~~~~~PI~ITENG~a~~d~~~~g~i~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dn--fEW~~Gy~~RFGL~~ 417 (447)
T d1e4ia_ 340 QKYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGLHVKGYMAWSLLDN--FEWAEGYNMRFGMIH 417 (447)
T ss_dssp GGGCSCCEEEEEECCCCCCCCBTTBCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGSCCCSEE
T ss_pred HHhcCCceEEecCCCCCCCcccCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCcchh--cChhhcccCcCceEE
Confidence 44478999999999876542 123678999999999999999999999999999999998 88887775 443
Q ss_pred CCCccHHHHHHHHHHHHhhc
Q 014151 395 WERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~ 414 (430)
-|-.+..+..|+++..++.+
T Consensus 418 VD~~t~~R~pK~S~~~y~~i 437 (447)
T d1e4ia_ 418 VDFRTQVRTPKQSYYWYRNV 437 (447)
T ss_dssp ECTTTCCEEECHHHHHHHHH
T ss_pred EcCCCCCeeeccHHHHHHHH
Confidence 33222336778888877776
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=9.5e-23 Score=205.71 Aligned_cols=304 Identities=13% Similarity=0.152 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
..++++|++.|+++|+|+.|+ +. +|++++|. +|.+|++++++++++|+.+.++||+++++|++ |+ .|
T Consensus 53 y~~y~eDi~ll~~lG~~~yRf---si-~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~H-fd-------~P 120 (426)
T d1ug6a_ 53 YRRYEEDIALMQSLGVRAYRF---SV-AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYH-WD-------LP 120 (426)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE---EC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hhhhHHHHHHHHHcCCCEEEc---cC-CHHHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEecc-cc-------cc
Confidence 578999999999999999998 32 59999997 79999999999999999999999999999987 32 26
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CCC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DPS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~~ 222 (430)
.|....|+ |.+++..+.|.+|.+.++++ |++. |--|.++|||.+.. ..+
T Consensus 121 ~~l~~~gG---------w~~~~~~~~F~~Ya~~v~~~--------fgd~--V~~w~TiNEP~~~~~~gy~~G~~ppg~~~ 181 (426)
T d1ug6a_ 121 LALEERGG---------WRSRETAFAFAEYAEAVARA--------LADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRN 181 (426)
T ss_dssp HHHHTTTG---------GGSHHHHHHHHHHHHHHHHH--------HTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred hhhhccCc---------cCCHHHHHHHHHHHHHHHHH--------hCcc--cceEEEecCCeeEeeeccccCccccCCcc
Confidence 77765443 88999999999999999999 9884 66799999996321 011
Q ss_pred hH-HHH------HHHHHHHHHHHhcCCCCEE-EEccCCccCCCCCCCcccCc---cchhh---ccCc------------c
Q 014151 223 GD-TLQ------DWIDEMSAFVKSIDKKHLV-TVGLEGFYGPKSPKRLTVNP---EMWAS---ALGS------------D 276 (430)
Q Consensus 223 ~~-~~~------~w~~~~~~~Ir~~dp~~lV-~~G~~g~~~~~~~~~~~~np---~~w~~---~~g~------------d 276 (430)
.. .++ .-.....+.+|+..+.... ++.....+. ..++...... ..|.. ..|. .
T Consensus 182 ~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~f~d~i~~g~yp~~~~~~~~~~~ 260 (426)
T d1ug6a_ 182 LEAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYG-EDPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPVP 260 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCEEC-SCHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCceeEEeccCCCCc-cchHHHHHHHHHhhhhcchHhhCCcchhHHhhcccCCC
Confidence 11 111 1123344567777765432 222111100 0000000000 00000 0000 0
Q ss_pred hh---hccCCCCcceEEeeecCCCCC------------CCcchhhhH--HHHHHHHHHHHHhhhhcCCCcEEEEecCCCC
Q 014151 277 FI---RNSNNDNIDFASVHIYPDHWF------------HDLEFEDDL--KFVTKWMLSHIEDGDKELNKPVFFTEYGLSN 339 (430)
Q Consensus 277 f~---~~~~~~~iD~~s~H~Y~~~w~------------~~~~~~~~~--~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~ 339 (430)
+. .......+||+++++|..... ++....... +....-+...++...+.+++||+|+|.|...
T Consensus 261 ~~~~d~~~ik~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~l~~~~~~y~~Pi~ITENG~~~ 340 (426)
T d1ug6a_ 261 ILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLLKRLGREVPWPLYVTENGAAY 340 (426)
T ss_dssp CCTTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTTCCBCCHHHHHHHHHHHHHHCSSCEEEEEECCCC
T ss_pred cchhHHHHhcCCcCccceeeEEeEEEecCCcccccccccCCCCccCCCCeECccHhHHHHHHHHHhcCCcEEEeecCCcc
Confidence 00 001124689999999974210 000000000 0011223334444443488999999999886
Q ss_pred CCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHH
Q 014151 340 LIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCG 410 (430)
Q Consensus 340 ~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~ 410 (430)
... ...+..|.+|++..+..+.++.+++..+.|+++|++.|+ .+|.+||+ ++.-|-++..+..|++++.
T Consensus 341 ~~~~~~~~~i~D~~Ri~yl~~~l~~~~~Ai~dGv~V~GY~~WSl~Dn--~EW~~Gy~~rfGL~~VD~~~~~R~pK~S~~~ 418 (426)
T d1ug6a_ 341 PDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDN--FEWAFGYTRRFGLYYVDFPSQRRIPKRSALW 418 (426)
T ss_dssp CCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCC--CCGGGGGGSCCCSEEEETTTTEEEEBHHHHH
T ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchh--cChhhcccCcCceEEEcCCCCceeeccHHHH
Confidence 531 124689999999999999999999999999999999998 88887765 3333323333566666666
Q ss_pred Hhh
Q 014151 411 LGR 413 (430)
Q Consensus 411 ~~~ 413 (430)
++.
T Consensus 419 y~~ 421 (426)
T d1ug6a_ 419 YRE 421 (426)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=8.9e-21 Score=181.05 Aligned_cols=154 Identities=16% Similarity=0.157 Sum_probs=121.8
Q ss_pred EEEeCCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHH
Q 014151 42 VTRNGTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKA 121 (430)
Q Consensus 42 v~~~g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~ 121 (430)
|+++|++|++||||++++|+|.+..........+.+.++++|+.||++|+|+||++.... +
T Consensus 2 v~i~~~~f~lNGk~~~l~G~~~~~~~~~~g~~~~~~~~~~di~l~k~~G~N~iR~~~~p~-------------~------ 62 (292)
T d1jz8a5 2 VRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPN-------------H------ 62 (292)
T ss_dssp EEEETTEEEETTEECCEEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCC-------------C------
T ss_pred EEEECCEEEECCEEEEEeeeEccCCCCccCCCCCHHHHHHHHHHHHhcCCCEEEecCCCC-------------h------
Confidence 789999999999999999999764332222345789999999999999999999965311 1
Q ss_pred HHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 122 LDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
++++++|+++||.|+..+...|... ........+|..++.+.+.++.++.| ++
T Consensus 63 -~~~~~~~D~~Gilv~~e~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~v~r--------~~ 115 (292)
T d1jz8a5 63 -PLWYTLCDRYGLYVVDEANIETHGM------------------VPMNRLTDDPRWLPAMSERVTRMVQR--------DR 115 (292)
T ss_dssp -HHHHHHHHHHTCEEEEECSCBCTTS------------------SSTTTTTTCGGGHHHHHHHHHHHHHH--------HT
T ss_pred -HHHHHHHhhcCCeEEeeeeecccCC------------------cccCCCCCCHHHHHHHHHHHHHHHHH--------cc
Confidence 3679999999999999886533111 11122345788999999999999999 99
Q ss_pred CCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 202 NDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 202 ~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
+||+|++|.+.||+... ....++...||++||+|+++.+.
T Consensus 116 nHPSvi~W~~~NE~~~~---------~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 116 NHPSVIIWSLGNESGHG---------ANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TCTTEEEEECCSSCCCC---------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCCcHHHhcccccCCcc---------hhhHHHHHHHHHHhhcCcccccc
Confidence 99999999999999753 23456677899999999999875
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=1.3e-20 Score=188.70 Aligned_cols=258 Identities=17% Similarity=0.219 Sum_probs=161.5
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCC--CCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG--QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg--~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~ 157 (430)
++||+.||++|+|+||+.+. |..+++.++ .+++..++.||++|++|+++||+|||+||. ..|+.....
T Consensus 76 e~D~~~i~~~G~N~VRiPi~----~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~---~pG~~~~~~--- 145 (408)
T d1h4pa_ 76 EQDFANIASQGFNLVRIPIG----YWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHG---AAGSQNGFD--- 145 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEE----GGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEE---CTTCSSCCG---
T ss_pred HHHHHHHHHCCCCEEEEecc----HHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCC---CCCCCcCCC---
Confidence 68899999999999999542 333444433 245678999999999999999999999985 234332111
Q ss_pred hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC---CceeEEeecCCCCCCCCCChHHHHHHHHHHH
Q 014151 158 WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND---PTIFAWELINEPRCMSDPSGDTLQDWIDEMS 234 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~---p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~ 234 (430)
..| ......|.+++.++.+.+.|+.|++| |+++ ++|+++||.|||..........+..+++++.
T Consensus 146 -~~~----~~~~~~~~~~~~~~~~~~~~~~ia~r--------~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~ 212 (408)
T d1h4pa_ 146 -NSG----LRDSYKFLEDSNLAVTINVLNYILKK--------YSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAY 212 (408)
T ss_dssp -GGS----STTCCCTTSHHHHHHHHHHHHHHHHH--------TTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHH
T ss_pred -CCC----cccccccCCchHHHHHHHHHHHHHHH--------hcccccccceeeeecccCccccccchHHHHHHHHHHHH
Confidence 011 12234566788899999999999999 9987 6899999999998643322345677899999
Q ss_pred HHHHhcCCC-CEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCC---cchhhhHHH
Q 014151 235 AFVKSIDKK-HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD---LEFEDDLKF 310 (430)
Q Consensus 235 ~~Ir~~dp~-~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~---~~~~~~~~~ 310 (430)
+.||+..|+ .+|.++ +++.+ +..|. +|..........++..|.|.. +... .+....+..
T Consensus 213 ~~iR~~~~~~~~iv~~-d~~~~----------~~~w~-----~~~~~~~~~~~vv~D~H~Y~~-f~~~~~~~s~~~~i~~ 275 (408)
T d1h4pa_ 213 EYLRNNIKSDQVIIIH-DAFQP----------YNYWD-----DFMTENDGYWGVTIDHHHYQV-FASDQLERSIDEHIKV 275 (408)
T ss_dssp HHHHHTTCCCCCEEEE-CTTCC----------TTGGG-----GSSCGGGTCCSEEEEEEECSC-SSHHHHTCCHHHHHHH
T ss_pred HHHHhccccCceEEEe-cCCCC----------hhhhh-----hhcccCCCCceeEeeccceee-ecCCcccCChhhhhhh
Confidence 999986654 555554 34321 11232 222211112234679999975 2211 111111111
Q ss_pred HHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------------------------------------CCChhHHHHHH
Q 014151 311 VTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------------------------------------GFEPSLRDKLY 353 (430)
Q Consensus 311 ~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------------------------------------~~~~~~r~~~~ 353 (430)
...+. .... ....|++++||+....++ .+ .+.+.+++
T Consensus 276 ~~~~~----~~~~-~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~-~~~~~~~~ 349 (408)
T d1h4pa_ 276 ACEWG----TGVL-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYW-SDERKENT 349 (408)
T ss_dssp HHHHH----HHHT-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGC-CHHHHHHH
T ss_pred hhhhh----hhhh-cccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhC-CHHHHHHH
Confidence 11111 1112 257899999998653210 01 24556666
Q ss_pred HHHHHHHHHHHhcCCCcccceeeeeccCCCccC
Q 014151 354 KTILDIVYKSAKRKRSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~ 386 (430)
+...++-.++- + ..+||+||+|+...-++|
T Consensus 350 r~~~eaQ~~~y-e--~~~GW~fWt~K~e~~~~W 379 (408)
T d1h4pa_ 350 RRYVEAQLDAF-E--MRGGWIIWCYKTESSLEW 379 (408)
T ss_dssp HHHHHHHHHHH-T--TTTEEEESCSCCSSCSTT
T ss_pred HHHHHHHHHHH-h--cCCCEEEeeeeCCCCCCC
Confidence 76665444433 2 257999999997655666
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.86 E-value=9.1e-22 Score=200.53 Aligned_cols=305 Identities=13% Similarity=0.159 Sum_probs=197.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|++++++++++|+.+.++||++++||++ |+ .
T Consensus 55 ~y~~y~eDi~l~~~lG~~~yRf---Si-~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~H-fd-------l 122 (464)
T d1gnxa_ 55 HYHRWREDVALMAELGLGAYRF---SL-AWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYH-WD-------L 122 (464)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEE---EC-CHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhhhhHHHHHHHHHcCCCEEEc---cC-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEec-Cc-------c
Confidence 3678999999999999999998 33 59999997 89999999999999999999999999999986 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CC
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DP 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |++ .|-.|.++|||.... ..
T Consensus 123 P~~l~~~gG---------W~n~~~v~~F~~YA~~v~~~--------fgd--~Vk~W~T~NEP~~~~~~gy~~g~~~pg~~ 183 (464)
T d1gnxa_ 123 PQELENAGG---------WPERATAERFAEYAAIAADA--------LGD--RVKTWTTLNEPWCSAFLGYGSGVHAPGRT 183 (464)
T ss_dssp BHHHHHTTC---------TTSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCC
T ss_pred HHHHhhhCC---------CCCHHHHHHHHHHHHHHHHH--------hcc--ccceeEEccCchhhhhccccccccccccc
Confidence 677765553 88999999999999999999 998 588899999996321 01
Q ss_pred Ch-HHHHHH------HHHHHHHHHhcCC-CCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc--
Q 014151 222 SG-DTLQDW------IDEMSAFVKSIDK-KHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS-- 275 (430)
Q Consensus 222 ~~-~~~~~w------~~~~~~~Ir~~dp-~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~-- 275 (430)
+. ..++.- .......||+.-| +..|.+.....+....+ .+|. .|.. ..|.
T Consensus 184 ~~~~~~~~~~~~l~Aha~a~~~~~~~~~~~~~ig~~~~~~~~~p~~----~~~~d~~aa~~~~~~~~~~~~dp~~~G~yP 259 (464)
T d1gnxa_ 184 DPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLT----DSDADADAVRRIDALANRVFTGPMLQGAYP 259 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEEECCCEEESS----SCHHHHHHHHHHHHHHTHHHHHHHHHSSCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccccccceEEeeeeeeecc----chhHHHHHHHHHHHHhhhhccchhhcCCCC
Confidence 11 111111 2234456676544 55554432111100000 0111 0100 0110
Q ss_pred -------------chh----hccCCCCcceEEeeecCCCCCCC----------------------cc---------hhhh
Q 014151 276 -------------DFI----RNSNNDNIDFASVHIYPDHWFHD----------------------LE---------FEDD 307 (430)
Q Consensus 276 -------------df~----~~~~~~~iD~~s~H~Y~~~w~~~----------------------~~---------~~~~ 307 (430)
.+. ..+....+||+++++|....... .. ....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 339 (464)
T d1gnxa_ 260 EDLVKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTA 339 (464)
T ss_dssp HHHHHHTTTTCCCTTSCTTHHHHHCCCCSCEEEECSCCEEEC----------------CCCSSTTCTTCCEECCSSCBCT
T ss_pred hHHHHHhhccCcccccChHHHHHhhCCcccccccccceEEEecCCCCCccCccccccccccCCCCcccccccCCCCCcCC
Confidence 000 00112467999999996421000 00 0000
Q ss_pred H--HHHHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 308 L--KFVTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 308 ~--~~~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
. +....-|...+....+.+ ++||+|+|.|+..... ...+..|..|++++++.+.++.+++..+.|+++|++.
T Consensus 340 ~gw~i~P~Gl~~~L~~i~~~Y~~~PI~ITENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~ 419 (464)
T d1gnxa_ 340 MGWAVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLL 419 (464)
T ss_dssp TCCBCCHHHHHHHHHHHHHHCTTSCEEEEEECCCCCCCCCTTSCCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSB
T ss_pred CCCeEecchhHHHHHHHHHHcCCCCEEEEecCcccccCCCCcCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCch
Confidence 0 001122333343333335 6899999999976531 1236899999999999999999999999999999999
Q ss_pred cCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhccc
Q 014151 380 VEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISR 416 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~ 416 (430)
|+ .+|..||+ ++..|-++..+..|+++..++.+-.
T Consensus 420 Dn--~EW~~Gy~~rfGl~~VD~~~~~R~pK~S~~~y~~ii~ 458 (464)
T d1gnxa_ 420 DN--FEWAHGYSKRFGAVYVDYPTGTRIPKASARWYAEVAR 458 (464)
T ss_dssp CC--CCGGGGGGCCCCSEEEETTTTEEEECHHHHHHHHHHH
T ss_pred hh--cChhhcccccCceEEEcCCCCCeeeccHHHHHHHHHH
Confidence 98 88887765 3332212223666777777766643
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.86 E-value=6e-22 Score=202.06 Aligned_cols=303 Identities=15% Similarity=0.199 Sum_probs=198.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|++++++++++|+.+.++||.+++||++ |+ .
T Consensus 52 ~y~~y~eDi~l~~~lG~~~yRf---Si-sWsRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H-~d-------l 119 (468)
T d1pbga_ 52 FYHKYPVDLELAEEYGVNGIRI---SI-AWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FD-------T 119 (468)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SC-------C
T ss_pred hhhhhHHHHHHHHHhCCCEEEc---cC-CHHHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEec-cc-------c
Confidence 4689999999999999999998 33 59999987 68999999999999999999999999999986 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC------------CC
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS------------DP 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~------------~~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |++ |-.|.+.|||++.. ..
T Consensus 120 P~~l~~~GG---------w~~~~~v~~F~~Ya~~~~~~--------fgd---vk~W~T~NEP~~~~~~gy~~G~~~P~~~ 179 (468)
T d1pbga_ 120 PEALHSNGD---------FLNRENIEHFIDYAAFCFEE--------FPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIK 179 (468)
T ss_dssp BHHHHHTTG---------GGSTHHHHHHHHHHHHHHHH--------CTT---CCEEEEESCHHHHHHHHHTSCCSTTCCC
T ss_pred hhhHhhcCc---------cCCHHHHHHHHHHHHHHHHh--------cCC---ceEEEEecCccccccccccccccCCccc
Confidence 677766553 88999999999999999999 965 45699999998421 00
Q ss_pred -Ch-HHHHHH------HHHHHHHHHhcCCCCEEEEccCCccCC-CCCCCcccCccc-------------hhh---ccCcc
Q 014151 222 -SG-DTLQDW------IDEMSAFVKSIDKKHLVTVGLEGFYGP-KSPKRLTVNPEM-------------WAS---ALGSD 276 (430)
Q Consensus 222 -~~-~~~~~w------~~~~~~~Ir~~dp~~lV~~G~~g~~~~-~~~~~~~~np~~-------------w~~---~~g~d 276 (430)
.. ...+.. ..+..+.+|+..|+..|.+-....+.. ..+ .+|.+ |.- ..| +
T Consensus 180 ~~~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~ig~~~~~~~~~p~~~----~~~~d~~aa~~~~~~~~~~~~d~~~~G-~ 254 (468)
T d1pbga_ 180 YDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP----ENPADVRAAELEDIIHNKFILDATYLG-H 254 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCCEEESST----TCHHHHHHHHHHHHHHTHHHHHHHHTS-S
T ss_pred cchhhHHHhhhhHHHHHHHHHHHHHhhccccccceEEecccEEeecc----CCHHHHHHHHHHHHHhhHHHhhhhcCC-C
Confidence 11 111221 234556678888887665433211100 001 01211 100 011 0
Q ss_pred hh---------------------------hccCCCCcceEEeeecCCCCCC----Ccc----------------------
Q 014151 277 FI---------------------------RNSNNDNIDFASVHIYPDHWFH----DLE---------------------- 303 (430)
Q Consensus 277 f~---------------------------~~~~~~~iD~~s~H~Y~~~w~~----~~~---------------------- 303 (430)
+. .......+||+++++|...+.. ...
T Consensus 255 yp~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
T d1pbga_ 255 YSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRR 334 (468)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHTTCCCEEEEECSCCEEEECCCCCCBC-----------CCEETTTEEE
T ss_pred CCHHHHHHHHHHhhhhCCCCCCCcchhhhhhccCCccceecccccceeEEeccCCCcccccCCCCccCcccccccccccc
Confidence 00 0112345799999999642100 000
Q ss_pred ----hhhhHHH----HHHHHHHHHHhhhhcC--CCcEEEEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 304 ----FEDDLKF----VTKWMLSHIEDGDKEL--NKPVFFTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 304 ----~~~~~~~----~~~~l~~~~~~a~~~~--gkPv~v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
.....++ ....+...+....+.. .+||+|+|.|+..... ...+..|..|++..++.+.+++.++..
T Consensus 335 ~~~~~~~~t~~gW~i~P~gl~~~l~~~~~~y~~~~pI~ITENG~~~~d~~~~~~i~D~~Ri~yl~~hL~~l~~Ai~dGv~ 414 (468)
T d1pbga_ 335 VAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAIADGAN 414 (468)
T ss_dssp CCCTTCC-----CCCCTHHHHHHHHHHHHHCTTCCCEEEEECCCCBCCCEETTEECCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCCCcCCCCCeehhhHHHHHHHHHHHhcCCCCCEEEecCCcCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHCCCC
Confidence 0000000 0112333333333223 4899999999976531 123678999999999999999999999
Q ss_pred cccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhccc
Q 014151 370 GAGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISR 416 (430)
Q Consensus 370 ~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~ 416 (430)
+.|+++|++.|+ .+|..||+ ++.-|-.+..+..|+++.-++.+-.
T Consensus 415 V~GY~~WSllDn--fEW~~Gy~~RFGL~~VD~~t~~R~pK~Sa~~y~~ii~ 463 (468)
T d1pbga_ 415 VKGYFIWSLMDV--FSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYKKLAE 463 (468)
T ss_dssp EEEEEEECSBCC--CBTTTBTTSBCCSEEEETTTTEEEECHHHHHHHHHHH
T ss_pred EEEEeecccchh--cChhhcccCcCceEEEcCCCCccccccHHHHHHHHHH
Confidence 999999999998 89988876 3332212223666777777666533
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.86 E-value=1.4e-21 Score=198.38 Aligned_cols=303 Identities=14% Similarity=0.191 Sum_probs=199.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .|.+|++++++++++|+.+.++||+++++|++ |+ .
T Consensus 56 ~y~~y~eDi~l~~~lG~~~yRf---Si-~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H-~d-------~ 123 (449)
T d1qoxa_ 56 SYHRVEEDVQLLKDLGVKVYRF---SI-SWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYH-WD-------L 123 (449)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhhhhHHHHHHHHHcCCCEEEc---cC-CHHHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEec-cc-------c
Confidence 3567999999999999999998 32 59999998 48999999999999999999999999999986 53 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC------------C
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD------------P 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~------------~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |++ .|--|.+.|||.+... .
T Consensus 124 P~~l~~~gG---------w~~~~~~~~F~~Ya~~v~~~--------fgd--~V~~W~T~NEP~~~~~~gy~~g~~~Pg~~ 184 (449)
T d1qoxa_ 124 PQALQDQGG---------WGSRITIDAFAEYAELMFKE--------LGG--KIKQWITFNEPWCMAFLSNYLGVHAPGNK 184 (449)
T ss_dssp BHHHHTTTG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCC
T ss_pred cchhccccC---------cCCHHHHHHHHHHHHHHHHH--------hcc--cccceEEecCcceeccccccccccCcccc
Confidence 678765543 88999999999999999999 998 5888999999975310 1
Q ss_pred ChH-HHH------HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCcc-------------chhh---ccCc---
Q 014151 222 SGD-TLQ------DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPE-------------MWAS---ALGS--- 275 (430)
Q Consensus 222 ~~~-~~~------~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~-------------~w~~---~~g~--- 275 (430)
+.. .++ .-.....+.+|+..|+-.|.+.....+...... +|. .|.. ..|.
T Consensus 185 ~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi~~~~~~~~p~~~----~~~d~~Aa~~~~~~~~~~~~dp~~~G~yp~ 260 (449)
T d1qoxa_ 185 DLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAVPYRR----TKEDMEACLRVNGWSGDWYLDPIYFGEYPK 260 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEECCCCEEEESSS----CHHHHHHHHHHHHTTTHHHHHHHHTSSCCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeeeeccccccccCCh----HHHHHHHHHHHHHhhcccccCceecCCCcH
Confidence 111 111 112344567888888877766442211100000 110 0000 0010
Q ss_pred -------------chh---hccCCCCcceEEeeecCCCCC---CC-------------cchhhhH--HHHHHHHHHHHHh
Q 014151 276 -------------DFI---RNSNNDNIDFASVHIYPDHWF---HD-------------LEFEDDL--KFVTKWMLSHIED 321 (430)
Q Consensus 276 -------------df~---~~~~~~~iD~~s~H~Y~~~w~---~~-------------~~~~~~~--~~~~~~l~~~~~~ 321 (430)
.+. .......+||+++++|..... +. ....... +....-|...++.
T Consensus 261 ~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~td~gwei~P~Gl~~~L~~ 340 (449)
T d1qoxa_ 261 FMLDWYENLGYKPPIVDGDMELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRY 340 (449)
T ss_dssp HHHHHHHHHTCCCCCCTTHHHHHCCCCSEEEEECSCEEEEEECSSGGGTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHH
T ss_pred HHHHHHHhccccccCCHHHHHHhcCCcccceecccccceeecCCccccCcccccccCCCCccCCCCCeeecchhHHHHHH
Confidence 000 001124579999999974210 00 0000000 0001112333333
Q ss_pred hhhcCCCc-EEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----
Q 014151 322 GDKELNKP-VFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG---- 391 (430)
Q Consensus 322 a~~~~gkP-v~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~---- 391 (430)
..+.++.| ++|+|.|...... ...+..|.+|++..++.+.++++++..+.|+++|++.|+ .+|.+||+
T Consensus 341 i~~~y~~p~i~ITENG~a~~d~~~~~~~i~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~Dn--~EW~~Gy~~RFG 418 (449)
T d1qoxa_ 341 TADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDN--FEWAEGYGMRFG 418 (449)
T ss_dssp HHHHTTSCCEEEEECCCCCCCCCCTTSSCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGTTSSCCC
T ss_pred HHHHhCCCeEEEeccCcccCCCCCccccccCHHHHHHHHHHHHHHHHHHHCCCCEEEEeecCcchh--cChhhcccCccc
Confidence 33336554 8999999976531 123689999999999999999999999999999999998 88987775
Q ss_pred EEcCCCccHHHHHHHHHHHHhhc
Q 014151 392 IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 392 i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
++.-|-.+..+..|+++.-++.+
T Consensus 419 L~~VD~~t~~R~pK~Sa~~yk~i 441 (449)
T d1qoxa_ 419 LVHVDYDTLVRTPKDSFYWYKGV 441 (449)
T ss_dssp SEEEETTTTEEEECHHHHHHHHH
T ss_pred eEEECCCCCCcccccHHHHHHHH
Confidence 33322122336677777777665
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.86 E-value=4e-22 Score=202.14 Aligned_cols=308 Identities=14% Similarity=0.223 Sum_probs=199.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC-CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS-PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. .|.+|++++++++++|+.+.++||+++++|++ |+ .
T Consensus 55 ~y~~y~eDi~l~~~lG~~~yRf---si-~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~H-f~-------~ 122 (443)
T d2j78a1 55 HYNRWKEDIEIIEKLGVKAYRF---SI-SWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYH-WD-------L 122 (443)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------C
T ss_pred hhhhhHHHHHHHHHcCCCEEEc---cC-CHHHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecC-cc-------c
Confidence 4678999999999999999998 32 59999987 58999999999999999999999999999987 43 2
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC------------C
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD------------P 221 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~------------~ 221 (430)
|.|....|+ |.+++..+.|.+|.+.+++| |++ .|-.|.++|||..... .
T Consensus 123 P~wl~~~gG---------w~~~~~v~~F~~Ya~~v~~~--------~gd--~V~~w~TiNEP~~~~~~gy~~G~~pPg~~ 183 (443)
T d2j78a1 123 PFALQLKGG---------WANREIADWFAEYSRVLFEN--------FGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMR 183 (443)
T ss_dssp BHHHHTTTG---------GGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCC
T ss_pred hhhhhhcCC---------ccChHHHHHHHHHHHHHHHH--------hCc--cccceEeccCceeEeecccccCccccccc
Confidence 677765443 88999999999999999999 988 5888999999975310 1
Q ss_pred Ch-HHHH------HHHHHHHHHHHhcCCCCEEEEccCCc-cCCCCCCC-----c-----ccCccchhh---ccCc-----
Q 014151 222 SG-DTLQ------DWIDEMSAFVKSIDKKHLVTVGLEGF-YGPKSPKR-----L-----TVNPEMWAS---ALGS----- 275 (430)
Q Consensus 222 ~~-~~~~------~w~~~~~~~Ir~~dp~~lV~~G~~g~-~~~~~~~~-----~-----~~np~~w~~---~~g~----- 275 (430)
+. ..++ .-..+..++||+..|+..|.+-.... +-..++.. . ..+ ..|.. ..|.
T Consensus 184 ~~~~~~~~~~n~l~AHa~A~~~~~~~~~~~~vGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~-~~~f~d~~~~g~yp~~~ 262 (443)
T d2j78a1 184 DIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNN-YPLFLNPIYRGDYPELV 262 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEEEEEESSSCHHHHHHHHHHHHHHS-THHHHHHHHHSSCCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcccCCceeeeecccccccCCccchhHHHHHHHHHHhh-hhhccchhhcCCChHHH
Confidence 11 1111 12345556778888876654432111 10000000 0 000 00100 0000
Q ss_pred ---------ch---hhccCCCCcceEEeeecCCCC---CCCcc---------hh-hhH--HHHHHHHHHHHHhhhhcCCC
Q 014151 276 ---------DF---IRNSNNDNIDFASVHIYPDHW---FHDLE---------FE-DDL--KFVTKWMLSHIEDGDKELNK 328 (430)
Q Consensus 276 ---------df---~~~~~~~~iD~~s~H~Y~~~w---~~~~~---------~~-~~~--~~~~~~l~~~~~~a~~~~gk 328 (430)
.+ ........+||+++++|.... .+... .+ ... +....-|...++...+..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~~l~~~~~~y~~ 342 (443)
T d2j78a1 263 LEFAREYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNP 342 (443)
T ss_dssp HHHHGGGSCTTGGGGHHHHTCCCSEEEEEEEEEEEEEECTTC-CCEEEECCSSCBCTTCCBCCTHHHHHHHHHHHHHHCC
T ss_pred HHhhhhcCcccchHHHHHhhCCcccceeecccceEEecCCCCCcccccccccCCcCCCCcEEecchHHHHHHHHHHhcCC
Confidence 00 001123568999999995321 00000 00 000 00011122333333333666
Q ss_pred c-EEEEecCCCCCCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCc
Q 014151 329 P-VFFTEYGLSNLIK-----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERT 398 (430)
Q Consensus 329 P-v~v~EfG~~~~~~-----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~ 398 (430)
| |+|+|+|...... ...+..|.+|++..++.+.+++++|..+.|+++|++.|+ .+|..||+ ++..|-.
T Consensus 343 p~I~ItENG~a~~d~~~~~g~v~D~~Ri~yl~~hL~~v~~Ai~dGv~V~GY~~WSllDn--~EW~~Gy~~rfGL~~VD~~ 420 (443)
T d2j78a1 343 PEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDN--FEWAEGYSKRFGIVYVDYS 420 (443)
T ss_dssp SCEEEEEECCCCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGGGGCCCCSEEEETT
T ss_pred CcEEEEecccccCCCCCccCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchh--cChhhcccCCCceEEEcCC
Confidence 6 9999999976531 123689999999999999999999999999999999998 88887765 4333212
Q ss_pred cHHHHHHHHHHHHhhccc
Q 014151 399 STYKLLTEQSCGLGRISR 416 (430)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~ 416 (430)
+..+..|+++..++.+-.
T Consensus 421 t~~R~pK~S~~~y~~ii~ 438 (443)
T d2j78a1 421 TQKRIVKDSGYWYSNVVK 438 (443)
T ss_dssp TTEEEECHHHHHHHHHHH
T ss_pred CCceeeccHHHHHHHHHH
Confidence 233667777777776643
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.84 E-value=2e-21 Score=195.52 Aligned_cols=299 Identities=17% Similarity=0.248 Sum_probs=190.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhh
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYV 154 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~ 154 (430)
...++++|++.|+++|+|+.|+ +. +|++++|.+|.+|+++++.++++|+++.++||.++++|++ |+ .|
T Consensus 48 ~y~ry~eDi~ll~~lG~~~yRf---Si-sWsRI~P~~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H-~d-------~P 115 (423)
T d1vffa1 48 HWELYRDDIQLMTSLGYNAYRF---SI-EWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLHH-FT-------SP 115 (423)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEE---EC-CHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------CB
T ss_pred hHHhhHHHHHHHHHhCCCEEEe---cC-cHHHeecCCCccChHHHHHHHHHHHHHHhcCCeeEEeecC-Cc-------ch
Confidence 3678999999999999999998 32 6999999999999999999999999999999999999986 53 26
Q ss_pred hhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC------------CC
Q 014151 155 NWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD------------PS 222 (430)
Q Consensus 155 ~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~------------~~ 222 (430)
.|....|+ |.+++..+.|.+|.+.+.++ + + .|-.|.+.|||.+... .+
T Consensus 116 ~~l~~~gG---------w~~~~~v~~F~~Ya~~~~~~--------~-d--~Vk~W~T~NEP~~~~~~gy~~G~~pPg~~~ 175 (423)
T d1vffa1 116 LWFMKKGG---------FLREENLKHWEKYIEKVAEL--------L-E--KVKLVATFNEPMVYVMMGYLTAYWPPFIRS 175 (423)
T ss_dssp HHHHHTTG---------GGSGGGHHHHHHHHHHHHHH--------T-T--TCCEEEEEECHHHHHHHHHTSCSSTTCCCC
T ss_pred HHHHhhhh---------ccCHHHHHHHHHHHHHHHHh--------h-c--ccceeeccCCcceeeeeccccccccccccC
Confidence 77765443 78899999999999988765 4 3 5888999999985310 11
Q ss_pred h-HHHHHH---HHHHHHHHHhcCCCCEEEEc-cCCccCCCCCCCcccCcc------------chhh----ccCcchh---
Q 014151 223 G-DTLQDW---IDEMSAFVKSIDKKHLVTVG-LEGFYGPKSPKRLTVNPE------------MWAS----ALGSDFI--- 278 (430)
Q Consensus 223 ~-~~~~~w---~~~~~~~Ir~~dp~~lV~~G-~~g~~~~~~~~~~~~np~------------~w~~----~~g~df~--- 278 (430)
. ..++.- +..-+.+.+.+.....+.+. ..+..-..++ .|. .|.. ..| ++.
T Consensus 176 ~~~~~~~~~n~l~Aha~a~~~~~~~~~~~~~~~~~~~~p~~~-----~~~d~~aa~~~~~~~~~~~~d~~~~G-~yp~~~ 249 (423)
T d1vffa1 176 PFKAFKVAANLLKAHAIAYELLHGKFKVGIVKNIPIILPASD-----KERDRKAAEKADNLFNWHFLDAIWSG-KYRGVF 249 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECCEEEESSS-----SHHHHHHHHHHHHHHTHHHHHHHHHC-EEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccceeeecccccCCCc-----hHHHHHHHHHhhhhcccccccceecC-ccchhH
Confidence 1 111111 11122222333333333221 1111100000 110 0000 011 110
Q ss_pred h--ccCCCCcceEEeeecCCCC-----CC----------Ccchh-hhH--HHHHHHHHHHHHhhhhcCCCcEEEEecCCC
Q 014151 279 R--NSNNDNIDFASVHIYPDHW-----FH----------DLEFE-DDL--KFVTKWMLSHIEDGDKELNKPVFFTEYGLS 338 (430)
Q Consensus 279 ~--~~~~~~iD~~s~H~Y~~~w-----~~----------~~~~~-~~~--~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~ 338 (430)
+ .+....+||+++++|.... .+ ....+ ... +.....+........+ .++||+|+|.|..
T Consensus 250 ~~~~~~~~~~DfiGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~p~gl~~~~~~~~~-y~~Pi~ItENG~~ 328 (423)
T d1vffa1 250 KTYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYMALKKASR-YGRPLYITENGIA 328 (423)
T ss_dssp CEEECCCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHHHHHHHGG-GCSCEEEEECCCC
T ss_pred HhhcCCCCCcchheeccccceeeeccCCCccccccccccCcccccCCCCceeccchhHHHHHHHhc-cCceeEEecCCCC
Confidence 0 1123567999999996321 00 00000 000 0000111111222343 8999999999997
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhc
Q 014151 339 NLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 339 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
.. .+..|..|++.++..+.+++++|..+.|+++|++.|+ .+|..||+ ++..|-.+..+..|+++..++.+
T Consensus 329 ~~----dD~~Ri~yl~~hl~~~~~Ai~dGV~v~GY~~WSl~Dn--~EW~~Gy~~RfGL~~VD~~t~~R~pK~S~~~y~~i 402 (423)
T d1vffa1 329 TL----DDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDN--YEWKEGFGPRFGLVEVDYQTFERRPRKSAYVYGEI 402 (423)
T ss_dssp CS----CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC--CCGGGTTCCCCCSEEECTTTCCEEECHHHHHHHHH
T ss_pred cc----CcHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcchh--cChhhcccccCceEEEcCCCCCcccccHHHHHHHH
Confidence 64 3789999999999999999999999999999999998 88877776 33332122236677777777776
Q ss_pred cccc
Q 014151 415 SRLN 418 (430)
Q Consensus 415 ~~~~ 418 (430)
-.+|
T Consensus 403 i~~n 406 (423)
T d1vffa1 403 ARSK 406 (423)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 4444
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.84 E-value=3.6e-21 Score=196.95 Aligned_cols=310 Identities=14% Similarity=0.211 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCC----------------------------CCCChHHHHHHHHHHH
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISP----------------------------GQFDERVFKALDHVIV 127 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~p----------------------------g~~de~~l~~lD~~l~ 127 (430)
..+.++|++.|+++|+|+.|+ +. +|++++|.+ |.+|+++++.++++|+
T Consensus 60 y~~y~eDi~l~~~lG~~~yRf---SI-~WsRI~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id 135 (489)
T d1uwsa_ 60 WGNYKTFHDNAQKMGLKIARL---NV-EWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFK 135 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCCSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEe---cc-cHHhcCcCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence 468999999999999999998 33 588888864 6799999999999999
Q ss_pred HHHHcCCEEEEeccCCcccCCCcchhhhhhhhhC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 128 EARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEG--IGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 128 ~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G--~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
.+.++||.++++|++ |+ .|.|..+.- .........=|.++++.+.|.+|.+.+++| |++ .
T Consensus 136 ~l~~~GIeP~VTL~H-~d-------lP~~L~d~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~--------fgd--r 197 (489)
T d1uwsa_ 136 DLKSRGLYFILNMYH-WP-------LPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWK--------FDD--L 197 (489)
T ss_dssp HHHHTTCEEEEESCS-SC-------CBTTTBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHH--------HTT--T
T ss_pred HHHHcCCccEEEEcC-CC-------CcHHHHhhhhccccccccCCCcCCHHHHHHHHHHHHHHHHH--------hcC--c
Confidence 999999999999986 53 245553200 000000011188999999999999999999 988 5
Q ss_pred eeEEeecCCCCCCC-----------C---CChH-------HHHHHHHHHHHHHHhcCCCCE-EEEccCCccCCCCCCCcc
Q 014151 206 IFAWELINEPRCMS-----------D---PSGD-------TLQDWIDEMSAFVKSIDKKHL-VTVGLEGFYGPKSPKRLT 263 (430)
Q Consensus 206 I~~wel~NEp~~~~-----------~---~~~~-------~~~~w~~~~~~~Ir~~dp~~l-V~~G~~g~~~~~~~~~~~ 263 (430)
|--|.+.|||.+.. . .+.. .+..-..+..+.||++.+... ++.....++- ..+....
T Consensus 198 Vk~WiTiNEP~~~~~~gy~g~~~~~pp~~~~~~~~~~~~hn~l~Aha~a~~~~~~~~~~~igi~~~~~~~~p-~~~~d~~ 276 (489)
T d1uwsa_ 198 VDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQP-LTDKDME 276 (489)
T ss_dssp CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEE-SSTTCHH
T ss_pred ceEEEeeCCCcEEeecccccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcceeEEeccchhh-cchhHHH
Confidence 87899999997421 0 1111 111122344556777776543 3333222211 1110000
Q ss_pred cCc------cchhh---ccCc------chhhccCCCCcceEEeeecCCCCC--------------CCc--------chh-
Q 014151 264 VNP------EMWAS---ALGS------DFIRNSNNDNIDFASVHIYPDHWF--------------HDL--------EFE- 305 (430)
Q Consensus 264 ~np------~~w~~---~~g~------df~~~~~~~~iD~~s~H~Y~~~w~--------------~~~--------~~~- 305 (430)
... ..|.. ..|. ..........+||+++++|..... ... ..+
T Consensus 277 a~~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (489)
T d1uwsa_ 277 AVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPT 356 (489)
T ss_dssp HHHHHHHHHTHHHHHHHHHCEEC----CEECTTTTTCCSEEEEEEEEEEEEEECSSSEEECTTSTTSSCSSSBCTTSCBB
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhhhhhhhhccccCccCcceecccchhhcccCCCcccccCccCcccccccccCCCCCc
Confidence 000 01110 0010 001111235689999999953210 000 000
Q ss_pred hhH--HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccCCC
Q 014151 306 DDL--KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVEGM 383 (430)
Q Consensus 306 ~~~--~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~ 383 (430)
... +....-|...+....+.+++||+|+|.|+.... +..|..|++..++++.+++.++..+.|+++|++.|+
T Consensus 357 t~~gw~i~P~Gl~~~L~~~~~rY~~PI~ITENG~~~~~----D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn-- 430 (489)
T d1uwsa_ 357 SDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADDA----DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADN-- 430 (489)
T ss_dssp CTTCCBCCTHHHHHHHHHHHHHHCCCEEEEECCCCCTT----CSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBCC--
T ss_pred CcCCCccCchhhhHHHHHHhhccCCCEEEecCCCCCCC----cchHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhh--
Confidence 000 001112333333332237899999999998764 567999999999999999999999999999999998
Q ss_pred ccCCCCce----EEcCCCccHHHHHHHHHHHHhhc
Q 014151 384 EEYNDDFG----IVPWERTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 384 ~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~ 414 (430)
.+|..||+ +++-|-.+..+..++++.-++.+
T Consensus 431 ~EW~~Gy~~RfGL~~VD~~t~~R~~K~S~~~y~~i 465 (489)
T d1uwsa_ 431 YEWASGFSMRFGLLKVDYNTKRLYWRPSALVYREI 465 (489)
T ss_dssp CCGGGGGGSCCCSEEECTTTCCEEECHHHHHHHHH
T ss_pred hChhhhhhccCceEEEcCCCCccccccHHHHHHHH
Confidence 88877765 43332111225556777777766
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.83 E-value=9.7e-21 Score=192.77 Aligned_cols=301 Identities=15% Similarity=0.225 Sum_probs=191.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC--CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcch
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS--PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQ 152 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~--pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~ 152 (430)
...+.++|++.|+++|+|+.|+ +. +|++++|. +|.+|++++++++++|+.|.++||++++||++ |+
T Consensus 55 ~y~ry~eDi~l~~~lG~~~yRf---Si-~WsRI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~H-fd------- 122 (462)
T d1wcga1 55 SYHKYKEDVAIIKDLNLKFYRF---SI-SWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH-WD------- 122 (462)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC-------
T ss_pred hhhhhHHHHHHHHHhCCCEEEe---eC-cHHHcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEecc-cc-------
Confidence 3578999999999999999998 33 59999997 79999999999999999999999999999986 53
Q ss_pred hhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC---------CC--
Q 014151 153 YVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS---------DP-- 221 (430)
Q Consensus 153 y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~---------~~-- 221 (430)
.|.|....|+ |.+++..+.|.+|.+.+++| |++ .|--|.++|||.+.. .+
T Consensus 123 ~P~~l~~~GG---------W~~~~~v~~F~~Ya~~v~~~--------fgd--~V~~W~T~NEP~~~~~~~~~~~~~P~~~ 183 (462)
T d1wcga1 123 LPQYLQDLGG---------WVNPIMSDYFKEYARVLFTY--------FGD--RVKWWITFNEPIAVCKGYSIKAYAPNLN 183 (462)
T ss_dssp CBHHHHHTTG---------GGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHSSSSTTCCC
T ss_pred chhhhhhcCC---------cccHHHHHHHHHHHHHHHHh--------ccc--cchheeeecCCceeeeccccccccCCcc
Confidence 3678876554 88999999999999999999 988 588899999996421 00
Q ss_pred C-h-HHHHHH------HHHHHHHHHhcC---CCCEEEEccCCccC-CCCCCCcccCcc-------------chhh---cc
Q 014151 222 S-G-DTLQDW------IDEMSAFVKSID---KKHLVTVGLEGFYG-PKSPKRLTVNPE-------------MWAS---AL 273 (430)
Q Consensus 222 ~-~-~~~~~w------~~~~~~~Ir~~d---p~~lV~~G~~g~~~-~~~~~~~~~np~-------------~w~~---~~ 273 (430)
. . ...+.- .......||+.. ++..|.+.....+. ...+ .+|. .|.. ..
T Consensus 184 ~~~~~~~~a~h~~l~AHa~A~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~----~~~~d~~aa~~~~~~~n~~~~d~~~~ 259 (462)
T d1wcga1 184 LKTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNA----ESDDDIETAERANQFERGWFGHPVYK 259 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEECCCEEEESST----TCHHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccccccceeeeeccceeEecCC----CchHHHHHHHHHHHhhhcccccceeC
Confidence 0 0 111111 123344566653 23334322211110 0000 0110 0100 00
Q ss_pred Ccchh----------------------------hccCCCCcceEEeeecCCCCC-----------CCcch--hhhHH---
Q 014151 274 GSDFI----------------------------RNSNNDNIDFASVHIYPDHWF-----------HDLEF--EDDLK--- 309 (430)
Q Consensus 274 g~df~----------------------------~~~~~~~iD~~s~H~Y~~~w~-----------~~~~~--~~~~~--- 309 (430)
| ++. ..+....+||+++++|..... +.... .....
T Consensus 260 g-~yP~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~i~~~~DfiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (462)
T d1wcga1 260 G-DYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTADFYALNHYSSRLVTFGSDPNPNFNPDASYVTSVDEAWLK 338 (462)
T ss_dssp S-SSCHHHHHHHHHHHHHTTCSSCSSCCCCHHHHHHHTTCCSSEEEECCCEEEEEESCCSSTTSCGGGCEEEECCGGGCC
T ss_pred C-CCCHHHHHHHHHhhHhcCCccccCCCcCHHHHHHhcCCccEEEEeeeecceeecccCCCCCcCCCccccccccCCccC
Confidence 1 000 001124579999999943210 00000 00000
Q ss_pred --------HHHHHHHHHHHhhhhcCCC-cEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHH-hcCCCcccceeeeec
Q 014151 310 --------FVTKWMLSHIEDGDKELNK-PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSA-KRKRSGAGALIWQLF 379 (430)
Q Consensus 310 --------~~~~~l~~~~~~a~~~~gk-Pv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~G~~~W~~~ 379 (430)
....-|...+....+.+++ ||+|+|.|+...+ ...+..|..|++.++..+.+++ +.|..+.|+++|++.
T Consensus 339 ~~~~~~~~~~P~Gl~~~L~~i~~~Y~~ppI~ITENG~a~~g-~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~ 417 (462)
T d1wcga1 339 PNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDG-QLDDFEKISYLKNYLNATLQAMYEDKCNVIGYTVWSLL 417 (462)
T ss_dssp SSCCCSSCCCHHHHHHHHHHHHHHHTSCCEEEEEECCCBSC-CSSCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECSB
T ss_pred CCCCCCceeChHHHHHHHHHHHHhcCCCCEEEecCCcCCCC-CcCCHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecCcc
Confidence 0112233333333333555 5999999998753 2346899999999999988887 458899999999999
Q ss_pred cCCCccCCCCce----EEcCC--CccHHHHHHHHHHHHhhc
Q 014151 380 VEGMEEYNDDFG----IVPWE--RTSTYKLLTEQSCGLGRI 414 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~--~~~~~~~~~~~~~~~~~~ 414 (430)
|+ .+|..||+ ++..| +....+..|+++.-++.+
T Consensus 418 Dn--~EW~~Gy~~RFGL~~VD~~~~~~~R~pK~S~~~y~~i 456 (462)
T d1wcga1 418 DN--FEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNV 456 (462)
T ss_dssp CC--CCGGGGGGSBCCSEEECTTSTTCCEEECHHHHHHHHH
T ss_pred hh--cChhhcccCccceEEEeCCCCCCccccccHHHHHHHH
Confidence 98 88987865 33322 111125566666666655
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.83 E-value=7.7e-21 Score=194.57 Aligned_cols=302 Identities=16% Similarity=0.228 Sum_probs=193.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC---CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS---PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~---pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|+++++.++++|+.+.++||.+++||++ |+
T Consensus 65 ~y~ry~eDi~l~~~lG~~~yRf---Si-sWsRI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~H-fd------ 133 (484)
T d1v02a_ 65 SYHMYAEDVRLLKEMGMDAYRF---SI-SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFH-WD------ 133 (484)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEE---EC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hhhhhHHHHHHHHHhCCCEEEc---cC-CHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecC-Cc------
Confidence 4678999999999999999998 33 59999986 68999999999999999999999999999986 53
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC--------C--
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS--------D-- 220 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~--------~-- 220 (430)
.|.|.... | .|.|+++.+.|.+|.+.+++| |++ .|-.|.+.|||.+.. .
T Consensus 134 -~P~~l~~~~G---------gw~n~~~~~~F~~Ya~~v~~~--------fgd--~V~~W~T~NEP~~~~~~~y~~g~~~p 193 (484)
T d1v02a_ 134 -TPQALVDAYG---------GFLDERIIKDYTDFAKVCFEK--------FGK--TVKNWLTFNEPETFCSVSYGTGVLAP 193 (484)
T ss_dssp -CBHHHHHHHC---------GGGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTT
T ss_pred -ccceeeeecC---------cccCHHHHHHHHHhhHHHHHH--------hcc--hhhceEEecCcceecccccccceecc
Confidence 25666443 3 288999999999999999999 988 588899999996310 0
Q ss_pred -----------C---C-hHHH------HHHHHHHHHHHHhcCCC--CEEEEccCCccCCCCCCCcccCcc----------
Q 014151 221 -----------P---S-GDTL------QDWIDEMSAFVKSIDKK--HLVTVGLEGFYGPKSPKRLTVNPE---------- 267 (430)
Q Consensus 221 -----------~---~-~~~~------~~w~~~~~~~Ir~~dp~--~lV~~G~~g~~~~~~~~~~~~np~---------- 267 (430)
+ + .+.+ ..-..+....||+..+. ..|.+..........+. +|.
T Consensus 194 g~~~~~~~~~~~~~~~~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~~~ig~~~~~~~~~p~~~----~~~d~~aa~~~~~ 269 (484)
T d1v02a_ 194 GRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADGRIGLALNVFGRVPYTN----TFLDQQAQERSMD 269 (484)
T ss_dssp CBCCTTSCSSBCSSCTTTHHHHHHHHHHHHHHHHHHHHHHHTCTTTCEEEEEEECCEEEESSS----SHHHHHHHHHHHH
T ss_pred cccCccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCceeeEecccceecCCC----chHHHHHHHHHHH
Confidence 0 0 1111 11223444567776543 34433221110000000 110
Q ss_pred ---chhh---ccCc------chh-----------hccCCCCcceEEeeecCCCCC------CCcc---------------
Q 014151 268 ---MWAS---ALGS------DFI-----------RNSNNDNIDFASVHIYPDHWF------HDLE--------------- 303 (430)
Q Consensus 268 ---~w~~---~~g~------df~-----------~~~~~~~iD~~s~H~Y~~~w~------~~~~--------------- 303 (430)
.|.. ..|. ... .......+||+++++|..... +...
T Consensus 270 ~~~~~f~d~~~~G~YP~~~~~~~~~~~p~~~~~~~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (484)
T d1v02a_ 270 KCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETK 349 (484)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCSTTCCCCSGGGGGCEEEESB
T ss_pred HHhhhhhHHHhCCCCCHHHHhhhhhcCcccchhhHHHhhcCCCccccccceeEEEeccCCCCCcccccccCccccccccc
Confidence 0100 0010 000 001124689999999953210 0000
Q ss_pred --------hhhhH---HHHHHHHHHHHHhhhhcC-CCcEEEEecCCCCCCCC-------CChhHHHHHHHHHHHHHHHHH
Q 014151 304 --------FEDDL---KFVTKWMLSHIEDGDKEL-NKPVFFTEYGLSNLIKG-------FEPSLRDKLYKTILDIVYKSA 364 (430)
Q Consensus 304 --------~~~~~---~~~~~~l~~~~~~a~~~~-gkPv~v~EfG~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~ 364 (430)
..... +....-|...+....+.+ +.||+|+|.|+...... ..+..|..|++.+++++.+++
T Consensus 350 ~~~~~~~~~~t~~~W~ei~P~GL~~~L~~~~~rY~~~PI~ITENG~a~~d~~~~~~~~~i~D~~Ri~yl~~hl~~v~~Ai 429 (484)
T d1v02a_ 350 GPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI 429 (484)
T ss_dssp CTTSCBSSCBCSSSSCBCCTHHHHHHHHHHHHHSCCCCEEEEEECCCEECSSCCCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcccCCCcCCCCceEChHHHHHHHHHHHHHcCCCCEEEeCCCCCCccccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 00000 001122333343333335 57999999999875321 126899999999999999999
Q ss_pred hcCCCcccceeeeeccCCCccCCCCce----EEcCCCccH--HHHHHHHHHHHhhc
Q 014151 365 KRKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTST--YKLLTEQSCGLGRI 414 (430)
Q Consensus 365 ~~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~--~~~~~~~~~~~~~~ 414 (430)
+++..+.|+++|++.|+ .+|..||+ +++.| ..+ .+..|+++.-+++-
T Consensus 430 ~dGv~V~GY~~WSllDn--~EW~~Gy~~RfGLv~VD-~~~~~~R~pK~Sa~wy~~f 482 (484)
T d1v02a_ 430 DLGADVRGYFAWSLLDN--FEWSSGYTERFGIVYVD-RENGCERTMKRSARWLQEF 482 (484)
T ss_dssp HTTCCEEEEEEECSBCC--CCGGGGGGEECCSEEEE-GGGTTEEEECHHHHHHHHH
T ss_pred HCCCCEEEEeecCcchh--hCccccccCCcceEEEe-CCCCCCcccccHHHHHHHh
Confidence 99999999999999998 89988876 33332 222 26667777666554
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.82 E-value=2.4e-20 Score=190.35 Aligned_cols=310 Identities=16% Similarity=0.222 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCC------------------------------CCChHHHHHHHHH
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG------------------------------QFDERVFKALDHV 125 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg------------------------------~~de~~l~~lD~~ 125 (430)
..+.++|++.|+++|+|+.|+ +. +|++++|.++ ..|+++++.++++
T Consensus 59 y~~y~eDi~l~~~lG~~~yRf---Si-~WsRi~P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~ 134 (481)
T d1qvba_ 59 WNLNQNDHDLAEKLGVNTIRV---GV-EWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEM 134 (481)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE---EC-CHHHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHcCCCEEEc---cC-cHHhcCcCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHH
Confidence 467799999999999999998 32 5888888642 2589999999999
Q ss_pred HHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhh------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccc
Q 014151 126 IVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEE------GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVE 199 (430)
Q Consensus 126 l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~------G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~ 199 (430)
|+.+.++||.+++||++ |+ .|.|..+. |.. ....=|.+++..+.|.+|.+.+++|
T Consensus 135 i~~l~~~GI~P~VTL~H-~d-------lP~~L~d~~~~~~~g~~---~~~GGW~n~~~v~~F~~YA~~v~~~-------- 195 (481)
T d1qvba_ 135 YKDWVERGRKLILNLYH-WP-------LPLWLHNPIMVRRMGPD---RAPSGWLNEESVVEFAKYAAYIAWK-------- 195 (481)
T ss_dssp HHHHHTTTCEEEEESCC-SC-------CBTTTBCHHHHHHHCGG---GSCBGGGSTHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHhCCeeEEEEec-CC-------CcHHHhhhhhccccccc---ccCCCccCHHHHHHHHHHHHHHHHH--------
Confidence 99999999999999986 54 24555320 100 0001178999999999999999999
Q ss_pred ccCCCceeEEeecCCCCCCC----------C-C---ChH-------HHHHHHHHHHHHHHhcCCCCE-EEEccCCccCC-
Q 014151 200 YRNDPTIFAWELINEPRCMS----------D-P---SGD-------TLQDWIDEMSAFVKSIDKKHL-VTVGLEGFYGP- 256 (430)
Q Consensus 200 yk~~p~I~~wel~NEp~~~~----------~-~---~~~-------~~~~w~~~~~~~Ir~~dp~~l-V~~G~~g~~~~- 256 (430)
|++ .|--|.+.|||.+.. . + +.. .+..-..+..+.||+..+..+ ++.... ++-.
T Consensus 196 fgd--rVk~WiTiNEP~~~~~~gy~~~~G~~~Pg~~~~~~~~~a~~~~l~AHa~A~~~~~~~~~~~igi~~~~~-~~~~~ 272 (481)
T d1qvba_ 196 MGE--LPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQ-WFELL 272 (481)
T ss_dssp HTT--SCSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECC-EEECS
T ss_pred hcc--hhheeEecCCCcEEEeeccccccccCCCCccchhhHhHHHHHHHHHHHHHHHHHhhcccCccceEEecc-ccccc
Confidence 988 577899999996321 0 0 111 111122344556788776542 222211 1110
Q ss_pred CCCCCc----ccCccchhh---ccCc-----chhhccCCCCcceEEeeecCCCC---CC-------------------C-
Q 014151 257 KSPKRL----TVNPEMWAS---ALGS-----DFIRNSNNDNIDFASVHIYPDHW---FH-------------------D- 301 (430)
Q Consensus 257 ~~~~~~----~~np~~w~~---~~g~-----df~~~~~~~~iD~~s~H~Y~~~w---~~-------------------~- 301 (430)
..+... ....-.|.. ..|. ++.. .....+||+++++|.... .+ .
T Consensus 273 ~~~~~~~~~~~~~~~~~f~d~~~~g~~~~~~~~~~-~i~~~~DfiGiNyYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (481)
T d1qvba_ 273 EGPAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRR-DLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPA 351 (481)
T ss_dssp SSCCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCT-TTSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTT
T ss_pred CCcHHHHHHHHHHhcccccchhhcCCcccCHHHHH-HhhccCCccccccccceEEeccCCCccccccccccccCCCcCCC
Confidence 011000 000000100 0111 1111 123458999999996311 00 0
Q ss_pred cchhhhH--HHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 302 LEFEDDL--KFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 302 ~~~~~~~--~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
....... +....-|...++...+.+++||+|+|.|..... +..|..|++..+.++.+++++|..+.|+++|++.
T Consensus 352 ~~~~t~~gw~i~P~Gl~~~L~~~~~~Y~~Pi~ITENG~~~~~----D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~ 427 (481)
T d1qvba_ 352 ENPCSDFGWEVYPEGLYLLLKELYNRYGVDLIVTENGVSDSR----DALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLT 427 (481)
T ss_dssp SCBBCTTCCBCCTHHHHHHHHHHHHHHCCEEEEEECCCCCTT----CSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSB
T ss_pred CCCCCccccccCcHHHHHHHHHHHHhcCCCEEEECCCCCccc----ChHHHHHHHHHHHHHHHHHHCCCCEEEEeeccch
Confidence 0000000 000111333333332237899999999997653 5689999999999999999999999999999999
Q ss_pred cCCCccCCCCce----EEcCCCccHHHHHHHHHHHHhhccccc
Q 014151 380 VEGMEEYNDDFG----IVPWERTSTYKLLTEQSCGLGRISRLN 418 (430)
Q Consensus 380 ~~~~~~~~dg~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (430)
|+ .+|.+||+ ++.-|-.+..+..|+++..++.+-..|
T Consensus 428 Dn--~EW~~Gy~~RfGL~~VD~~t~~R~pK~Sa~~yk~ii~~n 468 (481)
T d1qvba_ 428 DN--YEWAQGFRQKFGLVMVDFKTKKRYLRPSALVFREIATHN 468 (481)
T ss_dssp CC--CCGGGTTSSCCCSEEEETTTTEEEECHHHHHHHHHHHHT
T ss_pred hh--hChhhcccccCceEEEcCCCCCcccccHHHHHHHHHHhC
Confidence 98 88887775 333221223377788888888774444
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.82 E-value=6.3e-20 Score=188.38 Aligned_cols=302 Identities=16% Similarity=0.183 Sum_probs=187.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC---CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS---PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~---pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.|+++|+|+.|+ +. +|++++|. +|.+|+++++++|++|+.+.++||.++++|++ |+
T Consensus 73 ~y~~y~eDi~l~~~lG~~~yRf---SI-~WsRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~H-fd------ 141 (499)
T d1e4mm_ 73 SFSYWQKDIDVLDELNATGYRF---SI-AWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFH-WD------ 141 (499)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE---EC-CHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hHHHHHHHHHHHHHhCCCEEEc---cC-CHHHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEec-Cc------
Confidence 3679999999999999999998 33 59999885 35689999999999999999999999999986 43
Q ss_pred hhhhhhhhh-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------C
Q 014151 152 QYVNWAWEE-GIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------D 220 (430)
Q Consensus 152 ~y~~W~~~~-G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~ 220 (430)
.|.|.... |+ |.+++..+.|.+|.+.+++| |++ .|--|.+.|||.+.. .
T Consensus 142 -lP~~l~~~~GG---------W~~~~~~~~F~~YA~~v~~~--------fgd--~Vk~W~T~NEP~~~~~~gy~~G~~~p 201 (499)
T d1e4mm_ 142 -LPQTLQDEYEG---------FLDPQIIDDFKDYADLCFEE--------FGD--SVKYWLTINQLYSVPTRGYGSALDAP 201 (499)
T ss_dssp -CBHHHHHHHCG---------GGSTHHHHHHHHHHHHHHHH--------HTT--TCCEEEEESCTTHHHHHHHTSCSSTT
T ss_pred -hHHHHHHhccc---------ccCHHHHHHHHHHHHHHHHh--------hcc--ccceeEEccCceEEeecccccccccC
Confidence 36787643 43 88999999999999999999 988 588899999998420 0
Q ss_pred ---------------CChHHHHHH------HHHHHHHHHhc--CCCCEEEEccCCc-cCCCCCCCcccCccc--------
Q 014151 221 ---------------PSGDTLQDW------IDEMSAFVKSI--DKKHLVTVGLEGF-YGPKSPKRLTVNPEM-------- 268 (430)
Q Consensus 221 ---------------~~~~~~~~w------~~~~~~~Ir~~--dp~~lV~~G~~g~-~~~~~~~~~~~np~~-------- 268 (430)
.....++.- ..++.+++|+. .+...|....... +-...+. ++..
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~~h~~llAha~a~~~~~~~~~~~~g~ig~~~~~~~~~p~~~~----~~~~~~aa~~~~ 277 (499)
T d1e4mm_ 202 GRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDT----DRHSIAATERMK 277 (499)
T ss_dssp CCCCTTTCTTCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHSGGGCCEEECEEEEEEEEESSTT----CHHHHHHHHHHH
T ss_pred cccCccccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccccccccccccCCCc----chhHHHHHHHHH
Confidence 001112221 12344456553 3333333211110 0000110 0000
Q ss_pred -----hhh---ccCc------chh-----------hccCCCCcceEEeeecCCCC--------CCCc-------------
Q 014151 269 -----WAS---ALGS------DFI-----------RNSNNDNIDFASVHIYPDHW--------FHDL------------- 302 (430)
Q Consensus 269 -----w~~---~~g~------df~-----------~~~~~~~iD~~s~H~Y~~~w--------~~~~------------- 302 (430)
|.. ..|. +.. ..+....+||+++++|.... ....
T Consensus 278 ~~~~~~~~d~~~~g~Yp~~~~~~~~~~l~~~~~~e~~l~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 357 (499)
T d1e4mm_ 278 EFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTY 357 (499)
T ss_dssp HHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSSEEEEEEEEEEEEECCCCTTSTTCCGGGGGCEEEES
T ss_pred HhhhcchhhhhcCCcCchhHHHHHHHhCCcccHHHHHHhcCCcCcceeeeeeeeEEecCCCcccccCcccccccCccccc
Confidence 000 0010 000 00112467999999993210 0000
Q ss_pred ---------------chhhhH--HHHHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-----CChhHHHHHHHHHHHH
Q 014151 303 ---------------EFEDDL--KFVTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-----FEPSLRDKLYKTILDI 359 (430)
Q Consensus 303 ---------------~~~~~~--~~~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-----~~~~~r~~~~~~~~~~ 359 (430)
...... +....-|+..++...+.+++| |+|+|.|+...... ..+..|..|++.++..
T Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~w~i~P~Gl~~~L~~~~~~Y~~ppI~ITENG~a~~d~~~~~g~i~D~~Ri~Yl~~hL~~ 437 (499)
T d1e4mm_ 358 INASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCF 437 (499)
T ss_dssp BCTTSCBCSSEEECCSSCGGGCEECCTHHHHHHHHHHHHHTTSCCEEEEECCCCEETTSCHHHHHCCHHHHHHHHHHHHH
T ss_pred cCCCCcccCccccCCCCcCCCCcEECHHHHHHHHHHHHHHhCCCcEEEECCCCCCCCCCCCCCcccCHHHHHHHHHHHHH
Confidence 000000 000111333333333235555 99999999875321 1257899999999999
Q ss_pred HHHHHh-cCCCcccceeeeeccCCCccCCCCce----EEcCC-CccHHHHHHHHHHHHhh
Q 014151 360 VYKSAK-RKRSGAGALIWQLFVEGMEEYNDDFG----IVPWE-RTSTYKLLTEQSCGLGR 413 (430)
Q Consensus 360 ~~~~~~-~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~-~~~~~~~~~~~~~~~~~ 413 (430)
+.++++ .+..+.|+++|++.|+ .+|..||+ +++-| +....+..|+++..++.
T Consensus 438 ~~~Ai~~dGv~V~GY~~WSl~Dn--~EW~~Gy~~RfGL~~VD~~~~~~R~~K~S~~~y~~ 495 (499)
T d1e4mm_ 438 LNKVIKEKDVNVKGYLAWALGDN--YEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQS 495 (499)
T ss_dssp HHHHHHHHCCCEEEEEEECSBCC--CBTTTBTSEECCSEEEETTEEEEEEECHHHHHHHH
T ss_pred HHHHHHhCCCCEEEeeecchhhh--hChhhcccCcCceEEEeCCCCCCcccccHHHHHHH
Confidence 999886 5888999999999998 89988876 33222 11122556666665554
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.81 E-value=1.4e-18 Score=172.77 Aligned_cols=247 Identities=16% Similarity=0.205 Sum_probs=157.2
Q ss_pred HHHHHHHHHcCCCEEEEccccCCC-CCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc--CCcccCCCcchhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGG-YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV--NNLQAYGGKTQYVNW 156 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~-~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~--~~w~~~gg~~~y~~W 156 (430)
++.|+.||++|+|+||+-++.+.. +..-....|..+ ++++|++++.|+++||+|+|+|| +.|.+.|+...-..|
T Consensus 41 ~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~---l~~~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w 117 (387)
T d1ur4a_ 41 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNND---LEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAW 117 (387)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCC---HHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGG
T ss_pred ccHHHHHHHcCCCEEEeecccCCcccccCcCCCcccc---HHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCCCCCCchhh
Confidence 457999999999999986543211 111111224444 89999999999999999999998 345544332111112
Q ss_pred hhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC--CChHHHHHHHHHH
Q 014151 157 AWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD--PSGDTLQDWIDEM 233 (430)
Q Consensus 157 ~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~--~~~~~~~~w~~~~ 233 (430)
.. ...++..+...++.+.++++ +++++ .+.+|+|+|||+.... .+.+.+.+++++.
T Consensus 118 ~~-------------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~ 176 (387)
T d1ur4a_ 118 AN-------------LNFEDKKTALYQYTKQSLKA--------MKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAG 176 (387)
T ss_dssp TT-------------CCHHHHHHHHHHHHHHHHHH--------HHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHH
T ss_pred hc-------------cchhHHHHHHHHHHHHHHHH--------HhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHH
Confidence 10 12356778888888888888 66655 4778999999986431 2467889999999
Q ss_pred HHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhhHHHHHH
Q 014151 234 SAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTK 313 (430)
Q Consensus 234 ~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~ 313 (430)
+++||+.||++.|++...+.... +-..|.. +.... .....|++++|+||. |... .. -...
T Consensus 177 ~~avr~~dp~~~vi~~~~~~~~~--------~~~~~~~----~~~~~-~~~~~d~ig~s~Y~~-w~~~--~~----~~~~ 236 (387)
T d1ur4a_ 177 SQAVRETDSNILVALHFTNPETS--------GRYAWIA----ETLHR-HHVDYDVFASSYYPF-WHGT--LK----NLTS 236 (387)
T ss_dssp HHHHHHHCTTSEEEEEECCTTST--------THHHHHH----HHHHH-TTCCCSEEEEEECTT-TSCC--HH----HHHH
T ss_pred HHHHHhcCCCceEEEeccCccch--------HHHHHHH----HHHHh-cCCCcccccceeecc-cCcc--HH----HHHH
Confidence 99999999999998865432110 0001111 11111 223578999999997 5432 11 1222
Q ss_pred HHHHHHHhhhhcCCCcEEEEecCCCCCCC----------------C--CChhHHHHHHHHHHHHHHHHHhcCCCccccee
Q 014151 314 WMLSHIEDGDKELNKPVFFTEYGLSNLIK----------------G--FEPSLRDKLYKTILDIVYKSAKRKRSGAGALI 375 (430)
Q Consensus 314 ~l~~~~~~a~~~~gkPv~v~EfG~~~~~~----------------~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~ 375 (430)
.+.. .+. ..+||++|+|++...... + .+.+.+.++++.+.+.+.+. ...+.|.++
T Consensus 237 ~l~~---l~~-~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~---~~~G~G~~Y 309 (387)
T d1ur4a_ 237 VLTS---VAD-TYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDV---GEAGIGVFY 309 (387)
T ss_dssp HHHH---HHH-HHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTT---CTTEEEEEE
T ss_pred HHHH---HHH-HhCCceEEEEecccccCCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhc---CCCceEEEE
Confidence 2222 223 379999999999764210 1 24566778888777765432 224689999
Q ss_pred ee
Q 014151 376 WQ 377 (430)
Q Consensus 376 W~ 377 (430)
|.
T Consensus 310 We 311 (387)
T d1ur4a_ 310 WE 311 (387)
T ss_dssp EC
T ss_pred ec
Confidence 94
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.81 E-value=2.9e-19 Score=183.01 Aligned_cols=303 Identities=15% Similarity=0.212 Sum_probs=190.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccC---CCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQIS---PGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~---pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~ 151 (430)
...++++|++.||++|+|+.|+ +. +|++++|. +|.+|++++++++++|+.+.++||+++++|++ |+
T Consensus 71 ~y~~y~eDi~l~~~lG~~~yRf---Si-~WsRI~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~H-fd------ 139 (490)
T d1cbga_ 71 EYHRYKEDIGIMKDMNLDAYRF---SI-SWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFH-WD------ 139 (490)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE---EC-CHHHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SC------
T ss_pred hhhhhHHHHHHHHHcCCCEEEc---cC-CHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeec-CC------
Confidence 3578999999999999999998 33 59999986 68999999999999999999999999999986 43
Q ss_pred hhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC-----------
Q 014151 152 QYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----------- 220 (430)
Q Consensus 152 ~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----------- 220 (430)
.|.|....+ ..|.++++.+.|.+|.+.+++| |++ .|-.|.+.|||.+...
T Consensus 140 -lP~~l~~~~--------Ggw~n~~~~~~F~~Ya~~v~~~--------fgd--~V~~W~T~NEP~~~~~~gy~~G~~~pg 200 (490)
T d1cbga_ 140 -VPQALEDEY--------RGFLGRNIVDDFRDYAELCFKE--------FGD--RVKHWITLNEPWGVSMNAYAYGTFAPG 200 (490)
T ss_dssp -CBHHHHHHH--------CGGGSTTHHHHHHHHHHHHHHH--------HTT--TCCEEEEEECHHHHHHHHHTSCCSTTC
T ss_pred -ChHHHhhcc--------cccCCHHHHHHHHHHHHHHHHH--------hcC--ccceEEEccCCceeeeccccccccccc
Confidence 266775431 1278899999999999999999 988 5888999999964210
Q ss_pred --------------CChHHHHHHHH------HHHHHHHhc---CCCCEEEEccCCc-cCCCCCCCcccCccc--------
Q 014151 221 --------------PSGDTLQDWID------EMSAFVKSI---DKKHLVTVGLEGF-YGPKSPKRLTVNPEM-------- 268 (430)
Q Consensus 221 --------------~~~~~~~~w~~------~~~~~Ir~~---dp~~lV~~G~~g~-~~~~~~~~~~~np~~-------- 268 (430)
...+.++.... +....+|+. .++..|.+-.... +....+ +|.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~h~~l~Aha~a~~~~r~~~~~~~~~~vg~~~~~~~~~p~~~-----~~~d~~aa~~~~ 275 (490)
T d1cbga_ 201 RCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPASK-----EKADVDAAKRGL 275 (490)
T ss_dssp CCCGGGCSCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCEEEEEEECCEEEESSS-----SHHHHHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcceeeeecccceecccC-----ChHHHHHHHHHH
Confidence 00122233322 333445543 3444443221111 000000 1110
Q ss_pred -----hhh---ccCc--------------ch---hhccCCCCcceEEeeecCCCCC--------CCcch-----------
Q 014151 269 -----WAS---ALGS--------------DF---IRNSNNDNIDFASVHIYPDHWF--------HDLEF----------- 304 (430)
Q Consensus 269 -----w~~---~~g~--------------df---~~~~~~~~iD~~s~H~Y~~~w~--------~~~~~----------- 304 (430)
|.. ..|. .+ ........+||+++++|..... .....
T Consensus 276 ~~~~~~f~d~~~~G~yP~~~~~~~~~~~~~~~~e~~~~~~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 355 (490)
T d1cbga_ 276 DFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFE 355 (490)
T ss_dssp HHHTHHHHHHHHHSSCCHHHHHHHGGGSCCCCHHHHHHHTTCCSEEEEECCCEEEEEECCCCTTCCCCHHHHTCEEEESE
T ss_pred HHhhcccccchhcCCCcHHHHHHHHhcCCccchhhhhhccCCcCcceecceeceEeecCCCCCCCCcccccccccccccc
Confidence 000 0010 00 0001134679999999964210 00000
Q ss_pred --------hhhHHH---HHHHHHHHHHhhhhcCCCc-EEEEecCCCCCCCC-------CChhHHHHHHHHHHHHHHHHHh
Q 014151 305 --------EDDLKF---VTKWMLSHIEDGDKELNKP-VFFTEYGLSNLIKG-------FEPSLRDKLYKTILDIVYKSAK 365 (430)
Q Consensus 305 --------~~~~~~---~~~~l~~~~~~a~~~~gkP-v~v~EfG~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~~ 365 (430)
.....| ...-|...+....+.+++| |+|+|.|+...... ..+..|..|++.+++++.++++
T Consensus 356 ~~~~~~~~~~~~~W~~i~P~Gl~~~L~~i~~~Y~~p~i~ITENG~~~~d~~~~~~~g~i~D~~Ri~yl~~hl~~~~~Ai~ 435 (490)
T d1cbga_ 356 HNGKPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIG 435 (490)
T ss_dssp ETTEESSCBCSSTTCBCCTHHHHHHHHHHHHHTTCCCEEEEECCCCEECCTTSCHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCccCCCCceEChHHHHHHHHHHHHhcCCCcEEEecCCCCCcCCcccccCCccCChHHHHHHHHHHHHHHHHHH
Confidence 000000 1112333333333336666 88999998764311 1257899999999999999999
Q ss_pred cCCCcccceeeeeccCCCccCCCCce----EEcCCCccH-HHHHHHHHHHHhhc
Q 014151 366 RKRSGAGALIWQLFVEGMEEYNDDFG----IVPWERTST-YKLLTEQSCGLGRI 414 (430)
Q Consensus 366 ~~~~~~G~~~W~~~~~~~~~~~dg~~----i~~~~~~~~-~~~~~~~~~~~~~~ 414 (430)
+|..+.|+++|++.|+ .+|..||+ ++..|-.++ .+..|+++..++.+
T Consensus 436 dGv~v~GY~~WSl~Dn--~EW~~G~~~RfGl~~VD~~~~~~R~pK~S~~~y~~i 487 (490)
T d1cbga_ 436 DGVNVKGYFAWSLFDN--MEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSF 487 (490)
T ss_dssp TTCCEEEEEESCSBCC--CCGGGTTSEECCSEEEETTTTTEEEECHHHHHHHHH
T ss_pred CCCCEEEEeecChhHh--hChhhcccccCceEEEeCCCCcccccccHHHHHHHH
Confidence 9999999999999998 89988876 322221122 25566666665543
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.78 E-value=2e-17 Score=159.98 Aligned_cols=151 Identities=15% Similarity=0.193 Sum_probs=110.2
Q ss_pred EEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHH
Q 014151 49 FMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVE 128 (430)
Q Consensus 49 f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~ 128 (430)
|.+||+|++++|+|.+..... ..+.+++.++++|+.||++|+|+||+|.... + + + +.++++
T Consensus 18 f~lNG~p~~lrG~~~~~~~~~-~~~~~~e~~~~di~l~ke~G~N~IR~~~~~~---~---p-----~-------~~f~d~ 78 (348)
T d2je8a5 18 FEVNGIPMFAKGANYIPQDAL-LPNVTTERYQTLFRDMKEANMNMVRIWGGGT---Y---E-----N-------NLFYDL 78 (348)
T ss_dssp EEETTEEECEEEEEECCSCSS-GGGCCHHHHHHHHHHHHHTTCCEEEECTTSC---C---C-----C-------HHHHHH
T ss_pred EEECCEEEEEeeEecCCCCCC-CCCCCHHHHHHHHHHHHHcCCCEEecCCCCC---C---C-----C-------HHHHHH
Confidence 999999999999995433211 1235789999999999999999999975321 0 1 1 367899
Q ss_pred HHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeE
Q 014151 129 ARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFA 208 (430)
Q Consensus 129 A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~ 208 (430)
|+++||.|+..+...|. .+..+++..+.+++.++.+|.| ++|||+|++
T Consensus 79 cD~~GilV~~e~~~~~~------------------------~~~~~~~~~~~~~~~~~~~I~r--------~rNHPSIi~ 126 (348)
T d2je8a5 79 ADENGILVWQDFMFACT------------------------PYPSDPTFLKRVEAEAVYNIRR--------LRNHASLAM 126 (348)
T ss_dssp HHHHTCEEEEECSCBSS------------------------CCCCCHHHHHHHHHHHHHHHHH--------HTTCTTEEE
T ss_pred HHHCCCEEEeccchhcc------------------------CCCCCHHHHHHHHHHHHHHHHH--------hcCCCeEEE
Confidence 99999999988753221 1134688899999999999999 999999999
Q ss_pred EeecCCCCCC-------CCCChHHHHHH--------HHHHHHHHHhcCCCCEEEEcc
Q 014151 209 WELINEPRCM-------SDPSGDTLQDW--------IDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 209 wel~NEp~~~-------~~~~~~~~~~w--------~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|+++||+... ........... ...+...+++.+|.++++..+
T Consensus 127 W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
T d2je8a5 127 WCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSS 183 (348)
T ss_dssp EESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSEEESSB
T ss_pred EeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCceecCC
Confidence 9999997521 11112222211 223556778899999998653
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.78 E-value=3.2e-18 Score=166.61 Aligned_cols=244 Identities=15% Similarity=0.177 Sum_probs=156.0
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc--CCcccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV--NNLQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~--~~w~~~gg~~~y~~W~ 157 (430)
++.++.+|++|+|.||+-+ | .+|.+|.++ +++++++++.|+++||+|+++|| +.|.+.|....-..|.
T Consensus 30 ~d~~~~lk~~G~n~VRlrv-----W--~~p~~g~~~---~~~~~~~~~~a~~~Gm~vll~~hysd~Wadp~~q~~P~aw~ 99 (334)
T d1foba_ 30 QALETILADAGINSIRQRV-----W--VNPSDGSYD---LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWS 99 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE-----C--SCCTTCTTC---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSC
T ss_pred ccHHHHHHHcCCCEEEeee-----e--eCCCCCcCc---HHHHHHHHHHHHHCCCEEEEEecCCCcccCCCcCCCccccc
Confidence 3567889999999999944 3 245667666 88999999999999999999998 3465443221111121
Q ss_pred hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCC------CChHHHHHHH
Q 014151 158 WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSD------PSGDTLQDWI 230 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~------~~~~~~~~w~ 230 (430)
. ..-++..+.+.++++.++++ +|+.+ .+.+|+++|||+.... .+.+.+.+++
T Consensus 100 ~-------------~~~~~~~~~~~~~t~~v~~~--------~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll 158 (334)
T d1foba_ 100 T-------------TDLGTLKWQLYNYTLEVCNT--------FAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALL 158 (334)
T ss_dssp S-------------SCHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHH
T ss_pred c-------------cccccHHHHHHHHHHHHHHH--------HHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHH
Confidence 0 11266889999999999999 88764 4778999999975321 2456788999
Q ss_pred HHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccC--CCCcceEEeeecCCCCCCCcchhhhH
Q 014151 231 DEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSN--NDNIDFASVHIYPDHWFHDLEFEDDL 308 (430)
Q Consensus 231 ~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~--~~~iD~~s~H~Y~~~w~~~~~~~~~~ 308 (430)
+..+.+||+.+|+.-+.+......+.+. ....|.+. .+..... ...+|++++|+||. |....+..
T Consensus 159 ~a~~~aVr~~~~~~~~~i~~~~~~~~~~------~~~~~~~~---~~~~~g~~~~~~~Dvig~syYp~-w~~~~~l~--- 225 (334)
T d1foba_ 159 HSGAWGVKDSNLATTPKIMIHLDDGWSW------DQQNYFYE---TVLATGELLSTDFDYFGVSYYPF-YSASATLA--- 225 (334)
T ss_dssp HHHHHHHHTSCCSSCCEEEEEESCTTCH------HHHHHHHH---HHHHTSSSCGGGCCEEEEECCSS-SCTTCCHH---
T ss_pred HHHHHHHHHhhcccccceeeecccCCCh------hhhHHHHH---HHHhcCCCCCCCcCeEEEecCCC-CCCcccHH---
Confidence 9999999999875332222111111100 00112111 0111111 13579999999997 54322221
Q ss_pred HHHHHHHHHHHHh-hhhcCCCcEEEEecCCCCCCC-------------CCChhHHHHHHHHHHHHHHHHHhcCCCcccce
Q 014151 309 KFVTKWMLSHIED-GDKELNKPVFFTEYGLSNLIK-------------GFEPSLRDKLYKTILDIVYKSAKRKRSGAGAL 374 (430)
Q Consensus 309 ~~~~~~l~~~~~~-a~~~~gkPv~v~EfG~~~~~~-------------~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~ 374 (430)
. +...+.. +.+ ++||++|.|+|...... ..+++.|.+|++.++..+.+ ...+.|.+
T Consensus 226 -~----l~~~l~~l~~~-y~k~v~I~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~----~~~G~G~~ 295 (334)
T d1foba_ 226 -S----LKTSLANLQST-YDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEA----TTDGLGVY 295 (334)
T ss_dssp -H----HHHHHHHHHHH-HCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STTEEEEE
T ss_pred -H----HHHHHHHHHHH-hCCceEEEEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhh----cCCceEEE
Confidence 1 1222222 333 79999999999875421 13567888998888766533 23467999
Q ss_pred eee
Q 014151 375 IWQ 377 (430)
Q Consensus 375 ~W~ 377 (430)
+|.
T Consensus 296 YWe 298 (334)
T d1foba_ 296 YWE 298 (334)
T ss_dssp EEC
T ss_pred EeC
Confidence 996
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.78 E-value=2.2e-18 Score=167.03 Aligned_cols=152 Identities=16% Similarity=0.124 Sum_probs=114.1
Q ss_pred CCeEEECCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHH
Q 014151 46 GTHFMLDGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHV 125 (430)
Q Consensus 46 g~~f~~~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~ 125 (430)
|.+|++||||++++|+|.+. ... ...+++.++++|+.||++|+|+||+|... .+ +++
T Consensus 11 g~~f~vNG~~~~~rG~~~~p--~~~-~~~~~~~~~~~l~~~k~~G~N~iR~~~~~---------~~-----------~~f 67 (339)
T d2vzsa5 11 GRQYSVNGKPLLIRGGGYTP--DLF-LRWNETAAADKLKYVLNLGLNTVRLEGHI---------EP-----------DEF 67 (339)
T ss_dssp CEEEEETTEEECEEEEECCC--CTT-CCCCHHHHHHHHHHHHHTTCCEEEEESCC---------CC-----------HHH
T ss_pred CcEEEECCEEEEEeccccCC--CcC-CCCCHHHHHHHHHHHHHcCCCEEEecCCC---------CC-----------HHH
Confidence 56699999999999999652 222 13478999999999999999999996431 11 368
Q ss_pred HHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 126 IVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 126 l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
+++|+++||+|+..+...|. |..... .....-..+|..++.+++.++.+|+| +++||+
T Consensus 68 ~d~~D~~Gi~V~~e~~~~~~----------w~~~~~----~~~~~~~~~p~~~~~~~~~~~~~v~r--------~rnHPs 125 (339)
T d2vzsa5 68 FDIADDLGVLTMPGWECCDK----------WEGQVN----GEEKGEPWVESDYPIAKASMFSEAER--------LRDHPS 125 (339)
T ss_dssp HHHHHHHTCEEEEECCSSSG----------GGTTTS----TTSSSCCCCTTHHHHHHHHHHHHHHH--------HTTCTT
T ss_pred HHHHHHCCCeEecccccCcc----------ccccCC----cccccCCCCHHHHHHHHHHHHHHHHH--------hcCCCc
Confidence 99999999999987654321 211100 11122244688889999999999999 999999
Q ss_pred eeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEcc
Q 014151 206 IFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGL 250 (430)
Q Consensus 206 I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~ 250 (430)
|++|.+.||.... ..+.+.+.+.+|++||.++++..+
T Consensus 126 vi~W~~gNE~~~~--------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 126 VISFHIGSDFAPD--------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp BCCEESCSSSCCC--------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred EEEEecCcCCCch--------HHHHHHHHHHHHHhCCCceeEecC
Confidence 9999999998753 234556677799999999998654
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=7.1e-17 Score=155.63 Aligned_cols=133 Identities=17% Similarity=0.257 Sum_probs=104.3
Q ss_pred EeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 59 NGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 59 ~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+++ +..+ ++++.+++||+.||++|+|+||++++ .|..++|+||+|| ++.+|++|+.|+++||+||+
T Consensus 2 ~~~~~-~p~~-----~~~~~~~~D~~~~~~~G~n~vR~~i~---~W~~iep~~G~~~---~~~~d~~i~~~~~~Gi~~iv 69 (393)
T d1kwga2 2 LGVCY-YPEH-----WPKERWKEDARRMREAGLSHVRIGEF---AWALLEPEPGRLE---WGWLDEAIATLAAEGLKVVL 69 (393)
T ss_dssp EEEEC-CGGG-----SCHHHHHHHHHHHHHHTCCEEEECTT---CHHHHCSBTTBCC---CHHHHHHHHHHHTTTCEEEE
T ss_pred cCccc-Cccc-----CCHHHHHHHHHHHHHcCCCEEEeccc---chhhcCCCCCccC---HHHHHHHHHHHHHCCCEEEE
Confidence 57774 3222 25889999999999999999999654 4888999999998 67899999999999999999
Q ss_pred eccCCcccCCCcchhhhhhhhhC----------CCC--CCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCce
Q 014151 139 SLVNNLQAYGGKTQYVNWAWEEG----------IGI--SSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTI 206 (430)
Q Consensus 139 ~l~~~w~~~gg~~~y~~W~~~~G----------~~~--~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I 206 (430)
+|++.+ .|.|....+ ... .......+.+|..++.++++++.++.+ ++++|++
T Consensus 70 ~l~~~~--------~P~w~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 133 (393)
T d1kwga2 70 GTPTAT--------PPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAER--------YGGLEAV 133 (393)
T ss_dssp ECSTTS--------CCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHH--------HTTCTTE
T ss_pred EcCCCC--------CchhhhccCcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHH--------hcCCceE
Confidence 998642 134443211 000 012233467899999999999999999 9999999
Q ss_pred eEEeecCCCCCCC
Q 014151 207 FAWELINEPRCMS 219 (430)
Q Consensus 207 ~~wel~NEp~~~~ 219 (430)
..|++.|||.+..
T Consensus 134 ~~~~~~ne~~~~~ 146 (393)
T d1kwga2 134 AGFQTDNEYGCHD 146 (393)
T ss_dssp EEEECSSSTTTTT
T ss_pred EEEeecccccccC
Confidence 9999999998753
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.74 E-value=3.8e-17 Score=157.74 Aligned_cols=260 Identities=13% Similarity=0.164 Sum_probs=158.3
Q ss_pred HHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCC--cccCCCcchhhhhh
Q 014151 80 GAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNN--LQAYGGKTQYVNWA 157 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~--w~~~gg~~~y~~W~ 157 (430)
++.|+.||++|+|+||+.+ | .+|.+|.++ |+++|++++.|+++||+|||++|.. |.+.++..
T Consensus 30 ~~~~~~lk~~G~n~VRi~v-----W--~~p~~g~~~---~~~~~~~v~~a~~~gl~vil~~h~~~~wa~~~~~~------ 93 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQRV-----W--VNPADGNYN---LDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQT------ 93 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEE-----C--SSCTTCTTS---HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCB------
T ss_pred ccHHHHHHHcCCCEEEeee-----e--ecCCCCccC---HHHHHHHHHHHHHCCCEEEEEecCCccccCccccC------
Confidence 5678889999999999954 2 346667776 8999999999999999999999852 33222211
Q ss_pred hhhCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCc-eeEEeecCCCCCCC------CCChHHHHHH
Q 014151 158 WEEGIGISSSNDSFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPT-IFAWELINEPRCMS------DPSGDTLQDW 229 (430)
Q Consensus 158 ~~~G~~~~~~~~~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~-I~~wel~NEp~~~~------~~~~~~~~~w 229 (430)
....+-.+ +...+.++++++.++++ +|+... +..|++.|||+... ....+.+.++
T Consensus 94 ---------~p~~~~~~~~~~~~~~~~~~~~v~~~--------~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l 156 (332)
T d1hjsa_ 94 ---------MPAGWPSDIDNLSWKLYNYTLDAANK--------LQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARL 156 (332)
T ss_dssp ---------CCTTCCCSHHHHHHHHHHHHHHHHHH--------HHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHH
T ss_pred ---------CCcccccchhHHHHHHHHHHHHHHHH--------HHhcCCchhHhhhccccCCcccCccCCcchHHHHHHH
Confidence 00111112 56788899999999999 887654 56689999987432 1234678889
Q ss_pred HHHHHHHHHhcCCCC--EEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchh
Q 014151 230 IDEMSAFVKSIDKKH--LVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFE 305 (430)
Q Consensus 230 ~~~~~~~Ir~~dp~~--lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~ 305 (430)
++..+++||+.+++. .|.... ..+ ... ....|... .+.... ....+|++++|+||. |....+.
T Consensus 157 ~~~a~~av~~~~~~~~~~v~~~~--~~~-~~~-----~~~~~~~~---~~~~~~~~~~~~~D~ig~~~Y~~-~~~~~~~- 223 (332)
T d1hjsa_ 157 LHSAAWGIKDSSLSPKPKIMIHL--DNG-WDW-----GTQNWWYT---NVLKQGTLELSDFDMMGVSFYPF-YSSSATL- 223 (332)
T ss_dssp HHHHHHHHHTSCCSSCCEEEEEE--SCT-TCH-----HHHHHHHH---HHHTTSSSCGGGCCEEEEECCSS-SCTTCCH-
T ss_pred HHHHHHHHHhhccCCCcceeecc--cCc-Cch-----hhhhhHHH---HHHhcCcccCCccceEeeeecCC-CCCCCCH-
Confidence 999999999977543 333321 111 000 00011110 111111 123479999999987 4433222
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC-------------CCChhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 306 DDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK-------------GFEPSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 306 ~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~-------------~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
.... ..++...+..+||++|.|+|...... ..+.+.|.+|++.++..+.+ ...+.|
T Consensus 224 ---~~~~----~~~~~~~~~~g~~v~i~E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~----~~~g~G 292 (332)
T d1hjsa_ 224 ---SALK----SSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSS----VSRGVG 292 (332)
T ss_dssp ---HHHH----HHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STTEEE
T ss_pred ---HHHH----HHHHHHHHHhCCceEEEEeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHh----cCCceE
Confidence 1111 22222222379999999999864321 12567788888887765533 235789
Q ss_pred ceeee--eccCCCccC-CCCceEEcCC
Q 014151 373 ALIWQ--LFVEGMEEY-NDDFGIVPWE 396 (430)
Q Consensus 373 ~~~W~--~~~~~~~~~-~dg~~i~~~~ 396 (430)
.++|. |.++....+ .+.++++-.+
T Consensus 293 ~~yW~~~~~~~~~~g~~~~~~gLfd~~ 319 (332)
T d1hjsa_ 293 LFYWEPAWIHNANLGSSCADNTMFSQS 319 (332)
T ss_dssp EEEECTTCGGGTTTTSSSSBCCSBCTT
T ss_pred EEEecCcccCCCCCCCccCCCceECCC
Confidence 99994 444322222 1345666443
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.68 E-value=2.4e-16 Score=151.94 Aligned_cols=277 Identities=16% Similarity=0.157 Sum_probs=157.7
Q ss_pred HHHHHHHHHH-HHcCCCEEEEcc-ccCCC-----CCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC--CcccC
Q 014151 77 ARVGAMLQAG-AKMGLTVCRTWA-FNDGG-----YNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN--NLQAY 147 (430)
Q Consensus 77 ~~~~~~~~~~-~~~G~n~vR~~~-~~~g~-----~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~--~w~~~ 147 (430)
.++++.|..+ +++|++.||++. |.+.. +...++.+..|| +..+|++++.|+++||++++.|.- .|...
T Consensus 20 ~d~~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd---~~~~D~~~~~~~~~g~~~~~~l~~~p~~~~~ 96 (346)
T d1uhva2 20 KEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYN---FTYIDRIFDSFLEIGIRPFVEIGFMPKKLAS 96 (346)
T ss_dssp HHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEEC---CHHHHHHHHHHHHHTCEECEEECCCCTTTBS
T ss_pred HHHHHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccC---hHhHHHHHHHHHHcCCCeEEEEeccCccccC
Confidence 4555555544 779999999853 22210 111122233465 678999999999999999998742 23211
Q ss_pred CCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC-----CCceeEEeecCCCCCCCC--
Q 014151 148 GGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN-----DPTIFAWELINEPRCMSD-- 220 (430)
Q Consensus 148 gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~-----~p~I~~wel~NEp~~~~~-- 220 (430)
+.. ... ........|+..+.+.++++.+++| |++ ++.|..||++|||+....
T Consensus 97 ~~~-~~~------------~~~~~~~~p~~~~~w~~~v~~~~~~--------y~~~~~~~~~~~~~~evwNEp~~~~~~~ 155 (346)
T d1uhva2 97 GTQ-TVF------------YWEGNVTPPKDYEKWSDLVKAVLHH--------FISRYGIEEVLKWPFEIWNEPNLKEFWK 155 (346)
T ss_dssp SCC-EET------------TTTEECSCBSCHHHHHHHHHHHHHH--------HHHHHCHHHHTTCCEEESSCTTSTTTSG
T ss_pred CCC-Ccc------------cccccCCChhhHHHHHHHHHHHHHH--------HHhhcCcccccccccccccCcccccCCC
Confidence 111 000 0111233455678899999999999 764 467888999999986532
Q ss_pred -CChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCC
Q 014151 221 -PSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF 299 (430)
Q Consensus 221 -~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~ 299 (430)
.+.+.+.+++++++++||+.+|+..|..+. ..+.. + .|... -..+... ....+|++++|.|+....
T Consensus 156 ~~~~~~y~~~~~~~~~aik~~~P~~~v~~~~--~~~~~--------~-~~~~~-~l~~~~~-~~~~~D~i~~H~Y~~~~~ 222 (346)
T d1uhva2 156 DADEKEYFKLYKVTAKAIKEVNENLKVGGPA--ICGGA--------D-YWIED-FLNFCYE-ENVPVDFVSRHAYTSKQG 222 (346)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCTTSCEEEEE--ECTTC--------T-HHHHH-HHHHHHH-HTCCCSEEEEEEECBCCC
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCceEeecc--ccCCc--------c-ccHHH-HHHHHHh-cCCcccceeeecCCCCCC
Confidence 245778888999999999999998775432 11110 0 11100 0011111 235799999999985432
Q ss_pred CCcc-----hhhhHHHHH---HHHHHHHHhhhhcCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcCCC
Q 014151 300 HDLE-----FEDDLKFVT---KWMLSHIEDGDKELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRKRS 369 (430)
Q Consensus 300 ~~~~-----~~~~~~~~~---~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~ 369 (430)
.... .....+... ..++..+.... ..++|++++|+|....... .+...+..++...+. . ... .
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pi~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~---~-~~~--~ 295 (346)
T d1uhva2 223 EYTPHLIYQEIMPSEYMLNEFKTVREIIKNSH-FPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILS---E-GGD--Y 295 (346)
T ss_dssp CCCSSCCCCCBCCHHHHHHHHHHHHHHHHTSS-CTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHH---H-GGG--T
T ss_pred cCCccchhhhhhhhhhHHHHHHHHHHHHHhcC-CCCccceeccccCCCCCCCCcccHHHHHHHHHHHHH---H-hcc--c
Confidence 1100 000011111 12233333333 2689999999998765321 122344555443332 2 122 4
Q ss_pred cccceeeeeccCCC------ccCCCCceEEcCCC
Q 014151 370 GAGALIWQLFVEGM------EEYNDDFGIVPWER 397 (430)
Q Consensus 370 ~~G~~~W~~~~~~~------~~~~dg~~i~~~~~ 397 (430)
+.+..+|++.+... ....++|++...+.
T Consensus 296 ~~~~~~~~~~d~~~~~~~~~~~~~~~~Gll~~dg 329 (346)
T d1uhva2 296 VDSFSYWTFSDVFEERDVPRSQFHGGFGLVALNM 329 (346)
T ss_dssp CSEEEESCSBSCCCTTSSCCSSCSCCSCSEETTT
T ss_pred ccEEEEEEeeccccccCCCCCcccCCccccCCCC
Confidence 67888999876411 12235788765543
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=99.55 E-value=2.2e-14 Score=138.57 Aligned_cols=245 Identities=12% Similarity=0.198 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
.+..++.|.. -+|.+=. . +..-|..+||+||+|| ++.+|++++.|+++||+|.--.. .|.. +-+.
T Consensus 28 ~~~y~~~~~~----~fn~~t~-~-n~~kW~~iEp~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l-~W~~-----~~p~ 92 (324)
T d1vbua1 28 AEKYMEVARR----EFNILTP-E-NQMKWDTIHPERDRYN---FTPAEKHVEFAEENDMIVHGHTL-VWHN-----QLPG 92 (324)
T ss_dssp HHHHHHHHHH----HCSEEEE-S-STTSHHHHCCBTTEEE---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCH
T ss_pred cHHHHHHHHH----hcCcccc-c-cCCchHHhcCCCCccC---hHHHHHHHHHHHHCCCEEEEecC-cccc-----cCCc
Confidence 4555665543 3887754 1 1224778899999998 77889999999999999864211 1431 1134
Q ss_pred hhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---Ch---HHHHHH
Q 014151 156 WAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SG---DTLQDW 229 (430)
Q Consensus 156 W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~---~~~~~w 229 (430)
|... .....++.++.+.++++.+++| |++ .|..||++|||...... .. .....+
T Consensus 93 ~~~~----------~~~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~ 152 (324)
T d1vbua1 93 WITG----------REWTKEELLNVLEDHIKTVVSH--------FKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEY 152 (324)
T ss_dssp HHHT----------SCCCHHHHHHHHHHHHHHHHHH--------TTT--TCCEEEEEESCBCTTSSBCCCHHHHHHCTHH
T ss_pred cccc----------cccchHHHHHHHHHHHHHHHHh--------cCC--CceEEEEecccccCCCCccCChHHHHhHHHH
Confidence 5421 0123467889999999999999 987 58889999999643211 11 111367
Q ss_pred HHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhh
Q 014151 230 IDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDD 307 (430)
Q Consensus 230 ~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~ 307 (430)
++.+.+++|+.||+..|.++..+.. . +...... -..+... -....+|.+++|.|....... .
T Consensus 153 ~~~a~~~ar~~dP~a~l~~n~~~~~---~-------~~~~~~~-~~~~v~~l~~~~~~id~iG~q~h~~~~~~~--~--- 216 (324)
T d1vbua1 153 IEKAFRWAKEADPDAILIYNDYSIE---E-------INAKSNF-VYNMIKELKEKGVPVDGIGFQMHIDYRGLN--Y--- 216 (324)
T ss_dssp HHHHHHHHHHHCTTSEEEEEESSCS---S-------SSHHHHH-HHHHHHHHHHTTCCCCEEEECCEEETTCCC--H---
T ss_pred HHHHHHHHHHhCCCCEEEEecCCCC---C-------CcHhHHH-HHHHHHHHHhCCCCcceeEeeeccCcCCCC--H---
Confidence 8888999999999998887642211 0 0011000 0011110 123457888888776432221 1
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCC---CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKG---FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+ .++..++...+ .||||+|+|+|......+ .+++.|+++++.++..+.+ .+.+.|.++|.+.+.
T Consensus 217 -~----~~~~~l~~~~~-~g~pi~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~----~p~v~gi~~W~~~D~ 283 (324)
T d1vbua1 217 -D----SFRRNLERFAK-LGLQIYITEMDVRIPLSGSEEYYLKKQAEVCAKIFDICLD----NPAVKAIQFWGFTDK 283 (324)
T ss_dssp -H----HHHHHHHHHHT-TTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHT----STTEEEEEESCSBTT
T ss_pred -H----HHHHHHHHHHh-cCCceeeeeceeccCCCCCChHHHHHHHHHHHHHHHHHHh----cCCeEEEEEeccccC
Confidence 1 13334444443 899999999998765432 1356778888887765543 456889999999875
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=99.55 E-value=3.9e-14 Score=136.21 Aligned_cols=236 Identities=18% Similarity=0.209 Sum_probs=148.3
Q ss_pred CCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCC
Q 014151 91 LTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDS 170 (430)
Q Consensus 91 ~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~ 170 (430)
+|.+=. . ++..|..+||+||+|+ ++.+|.+++.|+++||+|..-+.- |.. +.+.|.....
T Consensus 38 fn~~t~-~-n~~kW~~iep~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l~-w~~-----~~p~w~~~~~--------- 97 (320)
T d1xyza_ 38 FSMVVC-E-NEMKFDALQPRQNVFD---FSKGDQLLAFAERNGMQMRGHTLI-WHN-----QNPSWLTNGN--------- 97 (320)
T ss_dssp CSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHTSC---------
T ss_pred CCeeee-c-ccCchHHhCCCCCccC---hHHHHHHHHHHHHCCCEEEeeccc-cCC-----CCCcchhccc---------
Confidence 776642 1 2335888999999998 778899999999999998642211 321 1245653211
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----Ch---HHHHHHHHHHHHHHHhcCCC
Q 014151 171 FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----SG---DTLQDWIDEMSAFVKSIDKK 243 (430)
Q Consensus 171 f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~~---~~~~~w~~~~~~~Ir~~dp~ 243 (430)
+..++..+.+.++++.+++| |++. |..||++|||...... .. ....+++..+...+|+.||+
T Consensus 98 -~~~~~~~~~~~~~i~~v~~r--------y~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~ 166 (320)
T d1xyza_ 98 -WNRDSLLAVMKNHITTVMTH--------YKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPD 166 (320)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH--------TTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTT
T ss_pred -cchHHHHHHHHHHHHHHHHH--------cCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccC
Confidence 23467888999999999999 9984 9999999999754321 10 11124678888999999999
Q ss_pred CEEEEccCCccCCCCCCCcccCccchhhccCcchhh--ccCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHh
Q 014151 244 HLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR--NSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIED 321 (430)
Q Consensus 244 ~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~--~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~ 321 (430)
..+.++..+... + .+..=.. ..+.. ......+|.+++|.|...... . .. ..-+...++.
T Consensus 167 a~l~~n~~~~~~---~-----~~~~~~~---~~~~~~~~~~~~~id~iG~q~h~~~~~~---~-~~----~~~~~~~l~~ 227 (320)
T d1xyza_ 167 ALLFYNDYNIED---L-----GPKSNAV---FNMIKSMKERGVPIDGVGFQCHFINGMS---P-EY----LASIDQNIKR 227 (320)
T ss_dssp SEEEEEESSCSS---S-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEESSCC---H-HH----HHHHHHHHHH
T ss_pred cEEEeecccccc---c-----cHHHHHH---HHHHHHHHhCcCccceEEecccccCCCC---c-hH----HHHHHHHHHH
Confidence 887776422111 0 1100000 00010 113345898888887643211 1 11 1223444444
Q ss_pred hhhcCCCcEEEEecCCCCCCCC---CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 322 GDKELNKPVFFTEYGLSNLIKG---FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 322 a~~~~gkPv~v~EfG~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
... .+|||+|+|+|......+ .+++.|+++++.++..+.+ .+.+.|.+.|.+.+.
T Consensus 228 ~~~-~g~pI~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~----~p~v~gi~~W~~~D~ 285 (320)
T d1xyza_ 228 YAE-IGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLA----NPNCNTFVMWGFTDK 285 (320)
T ss_dssp HHH-TTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHH----CTTEEEEEESCSBTT
T ss_pred HHh-cCCceeeeccccccCCCCCchhHHHHHHHHHHHHHHHHHh----CCCeeEEEEeecccC
Confidence 444 899999999998654321 1245677888777765554 346789999999875
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=99.53 E-value=2.7e-14 Score=136.55 Aligned_cols=226 Identities=16% Similarity=0.257 Sum_probs=143.2
Q ss_pred CCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCCC
Q 014151 91 LTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSND 169 (430)
Q Consensus 91 ~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 169 (430)
+|.+-.- +..-|..++|.||+|| ++.+|++++.|+++||+|.- +|. |.. ..+.|..
T Consensus 37 fn~~t~~--n~~kW~~~ep~~G~~~---~~~~D~~v~~a~~~gi~v~gh~l~--w~~-----~~p~w~~----------- 93 (302)
T d1nq6a_ 37 FGSVTPE--NEMKWDAVESSRNSFS---FSAADRIVSHAQSKGMKVRGHTLV--WHS-----QLPGWVS----------- 93 (302)
T ss_dssp CSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE--EST-----TCCTTTT-----------
T ss_pred CCeeeec--cCccchhhcCCCCcCC---cHHHHHHHHHHHHCCCEEEeeccc--ccc-----ccccccc-----------
Confidence 8888862 1224778899999998 77899999999999999864 221 421 1234431
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC----ChHHH----HHHHHHHHHHHHhcC
Q 014151 170 SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP----SGDTL----QDWIDEMSAFVKSID 241 (430)
Q Consensus 170 ~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~----~~~~~----~~w~~~~~~~Ir~~d 241 (430)
.+..++.++.++++++.+++| |++ .|..||+.|||...... ..... .++++...+.+|++|
T Consensus 94 -~~~~~~~~~~~~~~i~~v~~r--------y~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~d 162 (302)
T d1nq6a_ 94 -PLAATDLRSAMNNHITQVMTH--------YKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVD 162 (302)
T ss_dssp -TSCHHHHHHHHHHHHHHHHHH--------TTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHC
T ss_pred -ccchHHHHHHHHHHHHHHHHH--------cCC--CcceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhC
Confidence 134567889999999999999 988 49999999999543211 11111 146788899999999
Q ss_pred CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHH
Q 014151 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 242 p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
|+..+.++.-+... . +...-.. ..++..+ ..-.+|.+++|.+.....+.. +. +...+
T Consensus 163 P~a~l~~nd~~~~~---~-----~~~~~~~---~~~i~~l~~~~~~id~iG~q~H~~~~~~~~--~~--------~~~~l 221 (302)
T d1nq6a_ 163 ADAKLCYNDYNTDG---Q-----NAKSNAV---YEMVKDFKQRGVPIDCVGFQSHFNSNSPVP--SD--------FQANL 221 (302)
T ss_dssp TTSEEEEEESSCSS---S-----SHHHHHH---HHHHHHHHHHTCCCCEEEECCEEBTTBCCC--TT--------HHHHH
T ss_pred CCCceeeccccccc---C-----chhhHHH---HHHHHHHHhccCCcceeEEEeccCCCCCCh--HH--------HHHHH
Confidence 99988876422111 0 0000000 0111110 123367766666543211111 11 22233
Q ss_pred HhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+...+ .|+||+|+|+++.. +++.|.++++.++..+.+ .+.+.|.++|.+.+.
T Consensus 222 ~~~~~-~g~pi~iTE~d~~~-----~~~~Qa~~~~~~~~~~~~----~p~v~~i~~W~~~D~ 273 (302)
T d1nq6a_ 222 QRFAD-LGVDVQITELDIEG-----SGSAQAANYTKVVNACLA----VTRCTGITVWGVTDK 273 (302)
T ss_dssp HHHHT-TTCEEEEEEEEECC-----CHHHHHHHHHHHHHHHHT----STTEEEEEESCSCGG
T ss_pred HHHHh-cCCceEEecCCCCC-----CcHHHHHHHHHHHHHHHc----cCCceEEEEeCCccC
Confidence 33343 89999999999864 357788888877765543 456889999999875
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=99.51 E-value=1.1e-13 Score=132.86 Aligned_cols=232 Identities=14% Similarity=0.163 Sum_probs=143.9
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSND 169 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 169 (430)
.+|.+-.- ++.-|..++|++|+|+ ++.+|++++.|+++||+|+--..- |.. +.+.|...
T Consensus 36 ~fn~~t~~--n~~kW~~iep~~g~~~---~~~~D~~v~~a~~~gl~v~gh~lv-w~~-----~~p~~~~~---------- 94 (312)
T d1fh9a_ 36 EFNLVVAE--NAMKWDATEPSQNSFS---FGAGDRVASYAADTGKELYGHTLV-WHS-----QLPDWAKN---------- 94 (312)
T ss_dssp HCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE-ESS-----SCCHHHHT----------
T ss_pred hCCccccc--ccCcchhhcCCCCcCC---cHHHHHHHHHHHHCCCEEEEeccc-ccc-----cccccccc----------
Confidence 58888751 1224778899999998 788999999999999999752211 421 12445421
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---ChHHH----HHHHHHHHHHHHhcCC
Q 014151 170 SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SGDTL----QDWIDEMSAFVKSIDK 242 (430)
Q Consensus 170 ~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~~~~----~~w~~~~~~~Ir~~dp 242 (430)
+..++.++.++++++.+++| |++ .|..|++.|||...... ..... .++++...+++|+.||
T Consensus 95 --~~~~~~~~~~~~~i~~v~~r--------y~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP 162 (312)
T d1fh9a_ 95 --LNGSAFESAMVNHVTKVADH--------FEG--KVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADP 162 (312)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH--------TTT--TCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCS
T ss_pred --cchHHHHHHHHHHHHHHHHh--------cCC--CceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCC
Confidence 33467889999999999999 987 59999999999754321 01111 2467888999999999
Q ss_pred CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHH
Q 014151 243 KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320 (430)
Q Consensus 243 ~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~ 320 (430)
+..+.++.-+... + +...-.. ..++..+ ..-.+|.+++|.++........ +...++
T Consensus 163 ~a~l~~n~~~~~~---~-----~~~~~~~---~~~i~~l~~~g~~id~ig~q~H~~~~~~~~~-----------~~~~l~ 220 (312)
T d1fh9a_ 163 TAKLCINDYNVEG---I-----NAKSNSL---YDLVKDFKARGVPLDCVGFQSHLIVGQVPGD-----------FRQNLQ 220 (312)
T ss_dssp SSEEEEEESSCSS---S-----SHHHHHH---HHHHHHHHHHTCCCCEEEECCEEETTCCCTT-----------HHHHHH
T ss_pred CceEEeecCcccc---c-----chhHHHH---HHHHHHHHhCCCCccceeEeecccccCcHHH-----------HHHHHH
Confidence 9988876422110 0 0000000 0111111 1223666655544322112111 122223
Q ss_pred hhhhcCCCcEEEEecCCCCCCCC--CChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 321 DGDKELNKPVFFTEYGLSNLIKG--FEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 321 ~a~~~~gkPv~v~EfG~~~~~~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.... .++||+|+|+|+...... .+++.|+++++.++..+.+ .+.+.|.++|.+.|.
T Consensus 221 ~~~~-~g~pi~iTE~d~~~~~~~~~~~~~~QA~~~~~~~~~~~~----~~~v~~v~~W~~~D~ 278 (312)
T d1fh9a_ 221 RFAD-LGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQ----VTRCQGVTVWGITDK 278 (312)
T ss_dssp HHHT-TTCEEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHT----STTEEEEEESCSBTT
T ss_pred HHHh-cCCceEEeccccccCCCCChhHHHHHHHHHHHHHHHHHh----cCCccEEEEeCCccC
Confidence 3333 899999999998765422 1345667777776665443 446889999999875
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=99.49 E-value=1.6e-13 Score=132.64 Aligned_cols=239 Identities=16% Similarity=0.195 Sum_probs=149.1
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSND 169 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 169 (430)
-+|.+=.- ++.-|..+||+||.|+ ++.+|++++.|+++||+|.--+.- |.. ..|.|+...+ ..
T Consensus 36 ~fn~~t~~--n~~kW~~iep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~lv-w~~-----~~P~W~~~~~------~~ 98 (330)
T d1n82a_ 36 HVNSITAE--NHMKFEHLQPEEGKFT---FQEADRIVDFACSHRMAVRGHTLV-WHN-----QTPDWVFQDG------QG 98 (330)
T ss_dssp HCSEEEES--STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-ESS-----SCCGGGGBCS------SS
T ss_pred hcCccccc--cCCChHhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeecc-cCC-----CCCchhccCC------cC
Confidence 37766651 1224778899999998 777899999999999999653211 421 2367874321 11
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-----Ch---HHHHHHHHHHHHHHHhcC
Q 014151 170 SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-----SG---DTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 170 ~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-----~~---~~~~~w~~~~~~~Ir~~d 241 (430)
.....++.++.+.++++.+++| |++ .|-.||++|||...... +. ....++++....++|+.|
T Consensus 99 ~~~~~~~~~~~~~~~i~~v~~r--------y~g--~v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~ 168 (330)
T d1n82a_ 99 HFVSRDVLLERMKCHISTVVRR--------YKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEAD 168 (330)
T ss_dssp SBCCHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHHHHHHh--------cCC--CceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhC
Confidence 2234567889999999999999 987 58899999999643211 10 111357788889999999
Q ss_pred CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHH
Q 014151 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 242 p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
|+..+.++.- +... +..... -..+... -....+|.+++|.|.....+. . + .+.+.+
T Consensus 169 P~a~l~~n~~---~~~~-------~~~~~~--~~~~v~~l~~~g~~idgiG~q~h~~~~~~~--~----~----~i~~~l 226 (330)
T d1n82a_ 169 PDALLFYNDY---NECF-------PEKREK--IFALVKSLRDKGIPIHGIGMQAHWSLTRPS--L----D----EIRAAI 226 (330)
T ss_dssp TTSEEEEEES---STTS-------HHHHHH--HHHHHHHHHHTTCCCCEEEECCEEESSSSC--H----H----HHHHHH
T ss_pred CcceEeeccc---cccc-------ccchhh--HHHHHHHHHhCCCCcceEEEeecCccCcCC--H----H----HHHHHH
Confidence 9988877632 1111 000000 0011111 123468999998775321111 1 1 133444
Q ss_pred HhhhhcCCCcEEEEecCCCCCCC--------CCC---hhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIK--------GFE---PSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~--------~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
+.... .|+||.++|+++..... ..+ .+.|+++++.++..+.+. .+.+.|..+|.+.+.
T Consensus 227 ~~~~~-~g~~i~iTE~d~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~---~p~v~gi~~Wg~~D~ 295 (330)
T d1n82a_ 227 ERYAS-LGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEY---RDVIQSVTFWGIADD 295 (330)
T ss_dssp HHHHT-TTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEESCSBTT
T ss_pred HHHHh-cCCceeeccccccccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCeeEEEEecCccC
Confidence 44443 89999999999865421 001 245778888777665542 234668999999874
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=99.43 E-value=2.2e-13 Score=130.15 Aligned_cols=226 Identities=14% Similarity=0.192 Sum_probs=140.2
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSND 169 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 169 (430)
-+|.+=. . +..-|..++|.||+|+ ++.+|++++.|+++||+|.--..- |.. +.+.|...
T Consensus 36 ~fn~~t~-~-n~~kW~~~ep~~g~~~---~~~~D~~v~~a~~~gi~v~gh~l~-w~~-----~~p~w~~~---------- 94 (302)
T d1v0la_ 36 EFNMVTA-E-NEMKIDATEPQRGQFN---FSSADRVYNWAVQNGKQVRGHTLA-WHS-----QQPGWMQS---------- 94 (302)
T ss_dssp HCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE-CSS-----SCCHHHHT----------
T ss_pred hCCeeee-c-ccCchhhhCCCCCcCC---hHHHHHHHHHHHHCCCEEEEeccc-cch-----hccccccc----------
Confidence 4887743 1 1224778899999998 778999999999999998653221 421 22456532
Q ss_pred CCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC----CC---hHHHHHHHHHHHHHHHhcCC
Q 014151 170 SFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD----PS---GDTLQDWIDEMSAFVKSIDK 242 (430)
Q Consensus 170 ~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~----~~---~~~~~~w~~~~~~~Ir~~dp 242 (430)
...+...+.++++++.+++| |++ .|..||+.|||..... .+ .....+|++....++|+.||
T Consensus 95 --~~~~~~~~~~~~~i~~~~~r--------y~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP 162 (302)
T d1v0la_ 95 --LSGSALRQAMIDHINGVMAH--------YKG--KIVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADP 162 (302)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCT
T ss_pred --cCcHHHHHHHHHHHHHHHhh--------cCC--CceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCC
Confidence 23466888999999999999 987 5889999999964321 01 11223688899999999999
Q ss_pred CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHH
Q 014151 243 KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320 (430)
Q Consensus 243 ~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~ 320 (430)
+..|.++.-+..+. ++..-... ..+... -....+|.+++|.+...-.+.. + . +.+.++
T Consensus 163 ~a~l~~n~~~~~~~--------~~~~~~~~--~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~--~-~-------~~~~l~ 222 (302)
T d1v0la_ 163 SAKLCYNDYNVENW--------TWAKTQAM--YNMVRDFKQRGVPIDCVGFQSHFNSGSPYN--S-N-------FRTTLQ 222 (302)
T ss_dssp TSEEEEEESSCCST--------TSHHHHHH--HHHHHHHHHHTCCCCEEEECCEEBTTBCCC--T-T-------HHHHHH
T ss_pred CCEEeecCcccccC--------ChHHHHHH--HHHHHHHHhCCCCccceEEeeccCCCCCCH--H-H-------HHHHHH
Confidence 98888764222110 11000000 011111 1234588888877643211111 1 1 222233
Q ss_pred hhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 321 DGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 321 ~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.... .|+||.|+|+++.... ..+++.++..+. +.+.+.|.++|.+.+.
T Consensus 223 ~~~~-~glpi~iTE~d~~~~q--------a~~~~~~~~~~~----s~~~v~gi~~Wg~~D~ 270 (302)
T d1v0la_ 223 NFAA-LGVDVAITELDIQGAP--------ASTYANVTNDCL----AVSRCLGITVWGVRDS 270 (302)
T ss_dssp HHHT-TTCEEEEEEEEETTCC--------HHHHHHHHHHHH----TCTTEEEEEESCSBGG
T ss_pred HHHh-cCCceEEeeccCCCCC--------HHHHHHHHHHHH----hhhCCeEEEECCCccC
Confidence 3333 8999999999986542 344444444433 2346889999999875
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=99.41 E-value=5.3e-13 Score=130.79 Aligned_cols=241 Identities=13% Similarity=0.148 Sum_probs=144.9
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSN 168 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 168 (430)
-+|.|=. . ++.-|..+++.+|+|| |+.+|++++.|+++||+|.- +|. |.. ..+.+.|....
T Consensus 46 ~fn~~t~-e-N~mKW~~iep~~G~~n---f~~~D~~v~~a~~~gi~v~GH~lv--W~~---~~~~~~~~~~~-------- 107 (364)
T d1us3a2 46 HFNHLTA-G-NIMKMSYMQPTEGNFN---FTNADAFVDWATENNMTVHGHALV--WHS---DYQVPNFMKNW-------- 107 (364)
T ss_dssp HCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEE--ECC---GGGSCHHHHTC--------
T ss_pred hCCeeee-c-ccCChHHhcCCCCccC---cHHHHHHHHHHHHCCCEEEEeecC--CCc---ccCCccccccC--------
Confidence 4887754 1 1223777899999998 77899999999999999864 221 421 11223454311
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC-----ChHHH-------HHHHHHHHHH
Q 014151 169 DSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP-----SGDTL-------QDWIDEMSAF 236 (430)
Q Consensus 169 ~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~-----~~~~~-------~~w~~~~~~~ 236 (430)
..+.++..+.++++++.+++| |++.+.|..||+.|||...... ....+ ..++....+.
T Consensus 108 --~~~~~~~~~~~~~~I~~vv~r--------y~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~ 177 (364)
T d1us3a2 108 --AGSAEDFLAALDTHITTIVDH--------YEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQT 177 (364)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHH--------HHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHH
T ss_pred --CccHHHHHHHHHHHHHHHHHh--------hccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHH
Confidence 123456889999999999999 9977789999999999543210 00111 2267778888
Q ss_pred HHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHH
Q 014151 237 VKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKW 314 (430)
Q Consensus 237 Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~ 314 (430)
+|+.+|+..+.++.-+.. .. ++..-.. ..+... -..-.+|.+++|.++..-.+ +. + -
T Consensus 178 Ar~~~p~a~l~~ndy~~~---~~-----~~~~~~~---~~~v~~l~~~g~~idgiG~Q~H~~~~~p--~~----~----~ 236 (364)
T d1us3a2 178 ARAADPAVILYYNDYNIE---QN-----NAKTTKM---VDMVKDFQARSIPIDGVGFQMHVCMNYP--SI----A----N 236 (364)
T ss_dssp HHHHCTTSEEEEEESSTT---SC-----SHHHHHH---HHHHHHHHHTTCCCCEEEECCEEESSCS--CH----H----H
T ss_pred HHHhccccceeecccccc---cc-----chhhhHH---HHHHHHHHhCCCccccceeeeeccCCCC--CH----H----H
Confidence 999999988777532111 00 0000000 011111 12234787777655421111 11 1 1
Q ss_pred HHHHHHhhhhcCCCcEEEEecCCCCCCCC-----------C---ChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 315 MLSHIEDGDKELNKPVFFTEYGLSNLIKG-----------F---EPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 315 l~~~~~~a~~~~gkPv~v~EfG~~~~~~~-----------~---~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
+++.++.... .|+||.|+|+++...... . ++..|+++|+.++..+.+.... ..+.|..+|.+.|
T Consensus 237 i~~~l~~~~~-~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~-~~~~~vt~Wg~~D 314 (364)
T d1us3a2 237 ISAAMKKVVD-LGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPV-NQRGGISVWGTTD 314 (364)
T ss_dssp HHHHHHHHHT-TTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCG-GGEEEEEESCSBG
T ss_pred HHHHHHHHHh-cCCeeEEEeeeEecccCccccccccccCCCChHHHHHHHHHHHHHHHHHHhcccc-cccceEEEecCCc
Confidence 3344444443 899999999998654211 0 1345677888887776654321 1355889999877
Q ss_pred C
Q 014151 381 E 381 (430)
Q Consensus 381 ~ 381 (430)
.
T Consensus 315 ~ 315 (364)
T d1us3a2 315 A 315 (364)
T ss_dssp G
T ss_pred C
Confidence 5
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=99.29 E-value=1.9e-11 Score=116.35 Aligned_cols=226 Identities=13% Similarity=0.182 Sum_probs=137.5
Q ss_pred CCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCC
Q 014151 91 LTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDS 170 (430)
Q Consensus 91 ~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~ 170 (430)
+|.+=. . +..-|..+||.||+|+ ++.+|++++.|+++||+|.--.. -|.. +.|.|....
T Consensus 37 fn~~t~-e-n~~kW~~iEp~~G~~~---~~~~D~~v~~a~~~gl~v~gH~l-vW~~-----~~P~w~~~~---------- 95 (301)
T d1ta3b_ 37 FGVITP-E-NSMKWDALEPSQGNFG---WSGADYLVDYATQHNKKVRGHTL-VWHS-----QLPSWVSSI---------- 95 (301)
T ss_dssp CSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEE-ECSS-----SCCHHHHTC----------
T ss_pred CCeecc-c-ccCcchhhCCCCCcCC---cHHHHHHHHHHHHCCCEEEEecc-ccCc-----cCchhhhcc----------
Confidence 887753 1 2234788999999998 77889999999999999866322 1531 236776421
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCC---CCh--HH-HHHHHHHHHHHHHhcCCCC
Q 014151 171 FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSD---PSG--DT-LQDWIDEMSAFVKSIDKKH 244 (430)
Q Consensus 171 f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~---~~~--~~-~~~w~~~~~~~Ir~~dp~~ 244 (430)
...++.++.++++++.+++| |++ .|-.||+.|||-.... .+. +. -.++++...+.+|+.||+.
T Consensus 96 -~~~~~~~~~~~~~I~~v~~r--------Y~g--~i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a 164 (301)
T d1ta3b_ 96 -GDANTLRSVMTNHINEVVGR--------YKG--KIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDA 164 (301)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH--------TTT--SCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTS
T ss_pred -ccHHHHHHHHHHHHHHHHHh--------cCC--CcceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCc
Confidence 12356788999999999999 987 5899999999953221 111 11 1257888888999999998
Q ss_pred EEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhh
Q 014151 245 LVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDG 322 (430)
Q Consensus 245 lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a 322 (430)
.+.+..-+.... ++.. . ..-..++.. -....||.+++|.+...-..+ ... +...+...
T Consensus 165 ~l~~nd~~~~~~--------~~~~-~-~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~~~--~~~--------~~~~l~~~ 224 (301)
T d1ta3b_ 165 KLYINDYNLDSA--------SYAK-T-QAMASYVKKWLAEGVPIDGIGSQAHYSSSHWS--STE--------AAGALSSL 224 (301)
T ss_dssp EEEEEESCCCCT--------TSHH-H-HHHHHHHHHHHHTTCCCCEEEECCEECTTCCC--GGG--------HHHHHHHH
T ss_pred eeeecccccccc--------chHH-H-HHHHHHHHHHHhCCCCcceeeeeeecCCCCCC--HHH--------HHHHHHHH
Confidence 777654332111 1100 0 000011111 123468887777653321111 111 11222222
Q ss_pred hhcCCC-cEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 323 DKELNK-PVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 323 ~~~~gk-Pv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.+ .|. ||.|+|+++.... .+.|+.++..+++ .+.+.|..+|.+.+.
T Consensus 225 ~~-~g~~~i~iTE~dv~~~q--------a~~~~~~~~~~~~----~p~v~gi~~Wg~~D~ 271 (301)
T d1ta3b_ 225 AN-TGVSEVAITELDIAGAA--------SSDYLNLLNACLN----EQKCVGITVWGVSDK 271 (301)
T ss_dssp HT-TCCSEEEEEEEEETTCC--------HHHHHHHHHHHHT----CTTEEEEEESCSBGG
T ss_pred HH-cCCCcccccccccchHH--------HHHHHHHHHHHHc----ccCceEEEEcCCccC
Confidence 33 665 6999999986542 3445555554443 456899999999875
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=99.20 E-value=3.7e-11 Score=114.50 Aligned_cols=223 Identities=16% Similarity=0.220 Sum_probs=137.3
Q ss_pred CCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCCC
Q 014151 91 LTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSND 169 (430)
Q Consensus 91 ~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~ 169 (430)
+|.+=. . ++.-|..++|++|+|+ |+..|++++.|+++||+|.- +|. |.. +.|.|...
T Consensus 40 fn~~t~-e-N~~KW~~~ep~~G~~~---~~~~D~~v~~a~~~gi~vrGH~lv--W~~-----~~P~W~~~---------- 97 (303)
T d1i1wa_ 40 FGQVTP-E-NSMKWDATEPSQGNFN---FAGADYLVNWAQQNGKLIRGHTLV--WHS-----QLPSWVSS---------- 97 (303)
T ss_dssp CSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHHTCEEEEEEEE--CST-----TCCHHHHT----------
T ss_pred CCcccc-c-ccCcchhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEeeee--ecC-----cCchhhhc----------
Confidence 777664 1 2224778899999998 78899999999999999853 221 531 23677642
Q ss_pred CCCCC-HHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---C--hHHH-HHHHHHHHHHHHhcCC
Q 014151 170 SFFFD-PSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---S--GDTL-QDWIDEMSAFVKSIDK 242 (430)
Q Consensus 170 ~f~~d-~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~--~~~~-~~w~~~~~~~Ir~~dp 242 (430)
..+ ++..+.++++++.+++| |++ .|..||+.|||...... + .+.+ .++++...+.+|+.||
T Consensus 98 --~~~~~~~~~~~~~~i~~v~~r--------Y~g--~i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP 165 (303)
T d1i1wa_ 98 --ITDKNTLTNVMKNHITTLMTR--------YKG--KIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADP 165 (303)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHH--------TTT--SCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCT
T ss_pred --ccccHHHHHHHHHHHHHHHHH--------cCC--CCchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCC
Confidence 123 45678899999999999 987 59999999999643211 1 0111 2467788888999999
Q ss_pred CCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHH
Q 014151 243 KHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 320 (430)
Q Consensus 243 ~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~ 320 (430)
+..+.++.-+... + ++..-... ...+.. -..-.||-+++|.+-.. . ... .. .+...+
T Consensus 166 ~a~L~~Ndy~~~~---~-----~~~k~~~~--~~~v~~l~~~g~~iDgiG~Q~H~~~---~-~~~---~~----~~~~~~ 224 (303)
T d1i1wa_ 166 NAKLYINDYNLDS---A-----SYPKTQAI--VNRVKKWRAAGVPIDGIGSQTHLSA---G-QGA---SV----LQALPL 224 (303)
T ss_dssp TSEEEEEESSCCC---S-----SSHHHHHH--HHHHHHHHHTTCCCCEEEECCEECT---T-THH---HH----HHHHHH
T ss_pred CCEEEeecCcccC---C-----cHHHHHHH--HHHHHHHHhCCCCccceEeeeccCC---C-CcH---HH----HHHHHH
Confidence 9988886432211 1 11000000 001111 12345898898876432 1 111 11 111222
Q ss_pred hhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeeccC
Q 014151 321 DGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFVE 381 (430)
Q Consensus 321 ~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 381 (430)
.+. ..+.||.|+|+.+.... .+.|+.++..+.+ .+.+.|.++|.+.+.
T Consensus 225 ~~~-~g~~~i~iTElDi~~~q--------a~~y~~~~~~~~~----~p~v~git~Wg~~D~ 272 (303)
T d1i1wa_ 225 LAS-AGTPEVAITELDVAGAS--------STDYVNVVNACLN----VSSCVGITVWGVADP 272 (303)
T ss_dssp HHT-TCCSEEEEEEEEETTCC--------HHHHHHHHHHHHH----CTTEEEEEESCSBGG
T ss_pred HHH-cCCCceeeccccccccc--------HHHHHHHHHHHhc----cCCceEEEEeCCccC
Confidence 233 13447999999986542 3445666655544 357899999999875
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.10 E-value=9.7e-10 Score=106.48 Aligned_cols=239 Identities=18% Similarity=0.234 Sum_probs=141.9
Q ss_pred cCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCC
Q 014151 89 MGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSS 167 (430)
Q Consensus 89 ~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~ 167 (430)
.-+|.+=. . ++.-|..+++.+|.|+ ++..|++++.|+++||+|-- +|. |.. +.|.|.... .
T Consensus 34 ~~Fn~~t~-e-N~~KW~~ie~~~G~~~---~~~~D~~v~~a~~~gi~vrGH~Lv--W~~-----~~P~w~~~~------~ 95 (350)
T d1ur1a_ 34 KEFNSITP-E-NCMKWGVLRDAQGQWN---WKDADAFVAFGTKHNLHMVGHTLV--WHS-----QIHDEVFKN------A 95 (350)
T ss_dssp HHCSEEEE-S-STTSHHHHBCTTCCBC---CHHHHHHHHHHHHTTCEEEEEEEE--CSS-----SSCGGGTBC------T
T ss_pred HHcCeecc-c-ccCchhhhcCCCCccC---hHHHHHHHHHHHHCCCEEEEEEEE--Ecc-----ccccccccc------C
Confidence 35887743 1 2234778899999998 78899999999999999843 222 421 235565321 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---Ch--HHH-HHHHHHHHHHHHhcC
Q 014151 168 NDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SG--DTL-QDWIDEMSAFVKSID 241 (430)
Q Consensus 168 ~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~--~~~-~~w~~~~~~~Ir~~d 241 (430)
....++.++.++.++++++.+++| |++ .|..||+.|||-..... +. +.+ ..++.++..+.|+.|
T Consensus 96 ~~~~~~~~~l~~~~~~~I~~v~~r--------y~g--~i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~d 165 (350)
T d1ur1a_ 96 DGSYISKAALQKKMEEHITTLAGR--------YKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVD 165 (350)
T ss_dssp TSCBCCHHHHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHC
T ss_pred CccccCHHHHHHHHHHHHHHHHHh--------cCC--cceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhC
Confidence 111234456889999999999999 976 58999999999643210 10 111 346778888999999
Q ss_pred CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEe--eecCCCCCCCcchhhhHHHHHHHHHHHH
Q 014151 242 KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASV--HIYPDHWFHDLEFEDDLKFVTKWMLSHI 319 (430)
Q Consensus 242 p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~~~l~~~~ 319 (430)
|+..+.+.. |+...+ ...-....-..... -..-.||-+++ |+..+.. +. ..+.+.+
T Consensus 166 P~akL~~Nd---yn~~~~------~k~~~~~~lv~~l~-~~GvpiDgIGlQ~H~~~~~~----~~--------~~i~~~l 223 (350)
T d1ur1a_ 166 PKAHLMYND---YNIERT------GKREATVEMIERLQ-KRGMPIHGLGIQGHLGIDTP----PI--------AEIEKSI 223 (350)
T ss_dssp TTSEEEEEE---SSTTST------THHHHHHHHHHHHH-HTTCCCCEEEECCEEESSCS----CH--------HHHHHHH
T ss_pred CCceEeecc---cccccc------cccHHHHHHHHHHH-hCCCCceEEEEeeeccCCCC----CH--------HHHHHHH
Confidence 998776642 121111 00000000000011 12234787777 8776431 11 1133444
Q ss_pred HhhhhcCCCcEEEEecCCCCCCC------------------------CCC---hhHHHHHHHHHHHHHHHHHhcCCCccc
Q 014151 320 EDGDKELNKPVFFTEYGLSNLIK------------------------GFE---PSLRDKLYKTILDIVYKSAKRKRSGAG 372 (430)
Q Consensus 320 ~~a~~~~gkPv~v~EfG~~~~~~------------------------~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~G 372 (430)
+...+ .|+||.|+|+.+..... +.+ ...+++.|+.++..+.+. ...+.|
T Consensus 224 ~~~~~-lg~~i~iTElDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~qA~~y~~~~~~~~~~---~~~v~~ 299 (350)
T d1ur1a_ 224 IAFAK-LGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKH---SDKIDR 299 (350)
T ss_dssp HHHHT-TTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TTTEEE
T ss_pred HHHHh-cCCceeecccceeccccccccccccccchhhcccccCccccCCcHHHHHHHHHHHHHHHHHHHhc---CCCeeE
Confidence 44443 89999999998754211 001 123556666666555432 114789
Q ss_pred ceeeeeccC
Q 014151 373 ALIWQLFVE 381 (430)
Q Consensus 373 ~~~W~~~~~ 381 (430)
..+|.+.|.
T Consensus 300 it~Wg~~D~ 308 (350)
T d1ur1a_ 300 ATFWGVSDD 308 (350)
T ss_dssp EEESCSBGG
T ss_pred EEEECCccC
Confidence 999999985
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=99.06 E-value=8.3e-10 Score=107.77 Aligned_cols=242 Identities=18% Similarity=0.199 Sum_probs=139.6
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhh--hCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWE--EGIGISS 166 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~--~G~~~~~ 166 (430)
-+|.+=. . ++.-|..+++.+|.|| ++..|++++.|+++||+|.- +|. |.. +.|.|... .|.+...
T Consensus 43 ~Fn~~t~-e-N~mKW~~iep~~G~~n---~~~aD~~v~~a~~ngi~vrGH~Lv--W~~-----~~P~W~~~~~~~~~~~~ 110 (371)
T d1r85a_ 43 HFNSIVA-E-NVMKPISIQPEEGKFN---FEQADRIVKFAKANGMDIRFHTLV--WHS-----QVPQWFFLDKEGKPMVN 110 (371)
T ss_dssp HCSEEEE-S-STTSHHHHCSBTTBCC---CHHHHHHHHHHHHTTCEEEEECSC--CST-----TCCGGGGBCTTSSBGGG
T ss_pred hcCeecc-c-ccCcchhhcCCCCccC---cHHHHHHHHHHHHCCCEEEEeEEE--eec-----ccccccccccccccccc
Confidence 4888843 1 2234778899999998 77899999999999999965 342 531 23566532 1111100
Q ss_pred CCCCC---CCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC---Ch--HHH-HHHHHHHHHHH
Q 014151 167 SNDSF---FFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP---SG--DTL-QDWIDEMSAFV 237 (430)
Q Consensus 167 ~~~~f---~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~---~~--~~~-~~w~~~~~~~I 237 (430)
....+ ...++.++.++++|+.+++| |++ .|-.||+.|||...... +. +.+ .++++.....+
T Consensus 111 ~~~~~~~~~~~e~l~~~~~~~I~~v~~r--------Y~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A 180 (371)
T d1r85a_ 111 ETDPVKREQNKQLLLKRLETHIKTIVER--------YKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAA 180 (371)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHH--------HTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHH
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHH--------cCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHH
Confidence 00000 11235678899999999999 987 59999999998543211 10 111 35777888888
Q ss_pred Hhc-CCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhcc--CCCCcceEEe--eecCCCCCCCcchhhhHHHHH
Q 014151 238 KSI-DKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNS--NNDNIDFASV--HIYPDHWFHDLEFEDDLKFVT 312 (430)
Q Consensus 238 r~~-dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~--~~~~iD~~s~--H~Y~~~w~~~~~~~~~~~~~~ 312 (430)
|+. +|+..+.+.. |+... ++..-.. ..++..+ ..-.||-+++ |+.... + +. +
T Consensus 181 ~~~~~p~~~L~~Nd---y~~~~------~~k~~~~---~~~v~~l~~~g~pidgIG~Q~H~~~~~--~--~~----~--- 237 (371)
T d1r85a_ 181 RKYGGDNIKLYMND---YNTEV------EPKRTAL---YNLVKQLKEEGVPIDGIGHQSHIQIGW--P--SE----A--- 237 (371)
T ss_dssp HHHHCTTSEEEEEE---SCTTS------TTHHHHH---HHHHHHHHHTTCCCCEEEECCEECSSS--S--CH----H---
T ss_pred HHhcCCcceeeecc---ccccc------cchhHHH---HHHHHHHHHCCCCcceeeccccccCCC--C--CH----H---
Confidence 886 5776555532 11111 1100000 0011111 2234777766 554321 1 11 1
Q ss_pred HHHHHHHHhhhhcCCCcEEEEecCCCCCCCC---------CC---hhHHHHHHHHHHHHHHHHHhcCCCcccceeeeecc
Q 014151 313 KWMLSHIEDGDKELNKPVFFTEYGLSNLIKG---------FE---PSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLFV 380 (430)
Q Consensus 313 ~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~---------~~---~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~ 380 (430)
.+.+.++...+ .|+||.|+|+.+...... .+ ...+.++|+.++..+.+. .+.+.|.++|.+.|
T Consensus 238 -~i~~~l~~~a~-~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~---~p~v~git~WG~~D 312 (371)
T d1r85a_ 238 -EIEKTINMFAA-LGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKL---SDKISNVTFWGIAD 312 (371)
T ss_dssp -HHHHHHHHHHH-TTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHT---GGGEEEEEESSSST
T ss_pred -HHHHHHHHHHH-cCCceEEeeeEeccCCCccccCcccccccHHHHHHHHHHHHHHHHHHHhc---CCCeeEEEEeCCCC
Confidence 13344444444 899999999988654310 01 234567777777655442 23478999999987
Q ss_pred C
Q 014151 381 E 381 (430)
Q Consensus 381 ~ 381 (430)
.
T Consensus 313 ~ 313 (371)
T d1r85a_ 313 N 313 (371)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.69 E-value=5.6e-08 Score=93.68 Aligned_cols=236 Identities=17% Similarity=0.231 Sum_probs=137.7
Q ss_pred CCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE-eccCCcccCCCcchhhhhhhhhCCCCCCCC
Q 014151 90 GLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL-SLVNNLQAYGGKTQYVNWAWEEGIGISSSN 168 (430)
Q Consensus 90 G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil-~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~ 168 (430)
-+|.|=. . ++.-|..+++ .|.|+ ++..|++++.|+++||+|.- +|. |.. ..+.|.|...
T Consensus 36 ~Fn~~t~-e-N~~Kw~~~~~-~g~~n---~~~~D~~v~~a~~ng~~vrGH~Lv--W~~---~~~~P~w~~~--------- 95 (346)
T d1w32a_ 36 EFNQITA-E-NIMKMSYMYS-GSNFS---FTNSDRLVSWAAQNGQTVHGHALV--WHP---SYQLPNWASD--------- 95 (346)
T ss_dssp HCSEEEE-S-STTSGGGGEE-TTEEC---CHHHHHHHHHHHHTTCEEEEEEEE--CCC---GGGCCTTCST---------
T ss_pred hCCeecc-c-ccCCceeecC-CCCCC---chHHHHHHHHHHHCCCEEEEEeee--cCC---cccCcccccC---------
Confidence 3787753 1 1223666676 47777 77789999999999999964 333 421 1123566421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCC------------Ch---HHH--HHHHH
Q 014151 169 DSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDP------------SG---DTL--QDWID 231 (430)
Q Consensus 169 ~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~------------~~---~~~--~~w~~ 231 (430)
.+++.++.++++|+.+++| |++ .|-.|++.|||-..... .. ..+ ..|++
T Consensus 96 ----~~~~~~~~~~~~I~~v~~r--------y~g--~i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~ 161 (346)
T d1w32a_ 96 ----SNANFRQDFARHIDTVAAH--------FAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYID 161 (346)
T ss_dssp ----TCTTHHHHHHHHHHHHHHH--------TTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHH
T ss_pred ----CcHHHHHHHHHHHHHHHHh--------hCC--cceEEEEEeeeccccccCccccccccccccchhhhhccChHHHH
Confidence 2345788999999999999 987 59999999999643210 00 001 25778
Q ss_pred HHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc--cCCCCcceEEe--eecCCCCCCCcchhhh
Q 014151 232 EMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN--SNNDNIDFASV--HIYPDHWFHDLEFEDD 307 (430)
Q Consensus 232 ~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~--~~~~~iD~~s~--H~Y~~~w~~~~~~~~~ 307 (430)
.+.+..|+.||+..+.+.. |+...+ + ...... ...++. -..-.||-+++ |..... + +.
T Consensus 162 ~aF~~Ar~~dP~a~L~~Nd---yn~~~~------~-~k~~~~-~~lv~~L~~~g~pIDgIG~Q~H~~~~~--p--~~--- 223 (346)
T d1w32a_ 162 EAFRRARAADPTAELYYND---FNTEEN------G-AKTTAL-VNLVQRLLNNGVPIDGVGFQMHVMNDY--P--SI--- 223 (346)
T ss_dssp HHHHHHHHHCTTSEEEEEE---SSTTSC------S-HHHHHH-HHHHHHHHHTTCCCCEEEECCEEESSS--S--CH---
T ss_pred HHHHHHHHhCCCCEEEecc---CCcccC------c-HHHHHH-HHHHHHHHhcCCccceEEEEeeccCCC--C--CH---
Confidence 8899999999998777643 121110 0 000000 001111 02223777665 543321 1 11
Q ss_pred HHHHHHHHHHHHHhhhhcCC--CcEEEEecCCCCCCC---------------CC---ChhHHHHHHHHHHHHHHHHHhcC
Q 014151 308 LKFVTKWMLSHIEDGDKELN--KPVFFTEYGLSNLIK---------------GF---EPSLRDKLYKTILDIVYKSAKRK 367 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~g--kPv~v~EfG~~~~~~---------------~~---~~~~r~~~~~~~~~~~~~~~~~~ 367 (430)
+. +.+.++.... +| .||.|+|+.+..... .. ..+.+.++|+.+++.+.+. ...
T Consensus 224 -~~----~~~~l~~~~~-~g~~l~v~ITElDV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Qa~~y~~i~~~~~~~-~~~ 296 (346)
T d1w32a_ 224 -AN----IRQAMQKIVA-LSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEV-VPP 296 (346)
T ss_dssp -HH----HHHHHHHHHT-TCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHH-SCT
T ss_pred -HH----HHHHHHHHHH-hCCCceEEEEEEEeecCCcccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHh-ccC
Confidence 11 2222333332 55 789999997643220 00 1245677888888776653 233
Q ss_pred CCcccceeeeeccCCCccC
Q 014151 368 RSGAGALIWQLFVEGMEEY 386 (430)
Q Consensus 368 ~~~~G~~~W~~~~~~~~~~ 386 (430)
+.+.|..+|.+.|. .+|
T Consensus 297 ~~~~git~Wg~~D~--~sW 313 (346)
T d1w32a_ 297 GRRGGITVWGIADP--DSW 313 (346)
T ss_dssp TCEEEEEESCSBGG--GST
T ss_pred ccccEEEEeCCCcC--CCc
Confidence 46789999999875 345
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=98.51 E-value=6.9e-08 Score=93.29 Aligned_cols=156 Identities=13% Similarity=0.246 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEE--EEeccCCcccCCCc-
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRL--LLSLVNNLQAYGGK- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~v--il~l~~~w~~~gg~- 150 (430)
+.+.++++|+.||++|++.|.+.++ |..+|+ .||+|| |+.+|++++.++++|||| |+++|.-=..-|+.
T Consensus 27 ~~~~~~~~L~~LK~aGV~gV~vdVw----WGivE~~~Pg~Yd---ws~yd~l~~mv~~~GLKi~vvmsfH~cGgnvgd~~ 99 (417)
T d1vema2 27 NWETFENDLRWAKQNGFYAITVDFW----WGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDC 99 (417)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCCCCcc
Confidence 6889999999999999999999665 666888 499999 888999999999999986 55665310001111
Q ss_pred -chhhhhhhhhCCCCCCCCCCCCCC---------------HHHHHHHHHHHHHHHh----ccCCccc----------ccc
Q 014151 151 -TQYVNWAWEEGIGISSSNDSFFFD---------------PSIHKYFKHYVKTVLT----RKNTITG----------VEY 200 (430)
Q Consensus 151 -~~y~~W~~~~G~~~~~~~~~f~~d---------------~~~~~~~~~~~~~lv~----R~n~~tg----------~~y 200 (430)
-..|.|..+.. ...+-||+| ....+.+.++.+.+.+ ....++. .+|
T Consensus 100 ti~lP~Wv~e~~----~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I~ei~vglGp~GELRY 175 (417)
T d1vema2 100 NVPIPSWVWNQK----SDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRY 175 (417)
T ss_dssp CBCCCGGGGGGC----SSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSC
T ss_pred ccCCCHHHHhcc----cCCCeeEEcCCCCCCcCccCcccCCCchhccchHHHHHHHHHHHhhhhHHHHHhccCccccccC
Confidence 12467885411 112233333 2233444443333322 2223332 259
Q ss_pred cCCCceeEEeecCCCC--CCCCCChHHHHHHHHHHHHHHHhcC
Q 014151 201 RNDPTIFAWELINEPR--CMSDPSGDTLQDWIDEMSAFVKSID 241 (430)
Q Consensus 201 k~~p~I~~wel~NEp~--~~~~~~~~~~~~w~~~~~~~Ir~~d 241 (430)
..+|.+.+|...|+-. |+.......++.|+++....+.+++
T Consensus 176 Psyp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln 218 (417)
T d1vema2 176 PSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVN 218 (417)
T ss_dssp CCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHH
T ss_pred CCCchhccccCCCCCcccCCCHHHHHHHHHHHHhhhhhhhhcc
Confidence 9999999998766644 3322123677888887666665543
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.40 E-value=1.7e-06 Score=80.34 Aligned_cols=226 Identities=12% Similarity=0.145 Sum_probs=121.8
Q ss_pred CHHHHHHHHHHHH-HcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchh
Q 014151 75 SRARVGAMLQAGA-KMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 75 ~~~~~~~~~~~~~-~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y 153 (430)
+.+..++.|..-. .+|++.+|+.+ . +. ...|...-.++.+|.++|++|+.+. |..
T Consensus 17 ~~~~~~~~~~~~~~g~g~s~~R~~i-d--------~~-----~~~~~~~i~~~k~A~~~~~ki~~sp---WSp------- 72 (277)
T d1nofa2 17 TTEQINTAYGSGVGQIGLSIMRVRI-D--------PD-----SSKWNIQLPSARQAVSLGAKIMATP---WSP------- 72 (277)
T ss_dssp CHHHHHHHHCCSTTCCCCCEEEEEC-C--------SS-----GGGGGGGHHHHHHHHHTTCEEEEEC---SCC-------
T ss_pred CHHHHHHHhcCCCCCCcceEEEeee-C--------CC-----cchhhHhhHHHHHHHHcCCcEEEcC---CCC-------
Confidence 3555555554322 58999999944 1 11 1112223467888999999987654 642
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCCCC-----ChHHHH
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMSDP-----SGDTLQ 227 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~~~-----~~~~~~ 227 (430)
|.|...+|... ..-.-.++..+.|.+|+..+++. |+.+. .|-+..+.|||.....- .++...
T Consensus 73 P~wMK~n~~~~----~gg~L~~~~~~~~A~Yl~~~i~~--------y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~ 140 (277)
T d1nofa2 73 PAYMKSNNSLI----NGGRLLPANYSAYTSHLLDFSKY--------MQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFK 140 (277)
T ss_dssp CGGGBTTSSSB----SCCBBCGGGHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHH
T ss_pred cHHHcCCCCcc----cCCccCHHHHHHHHHHHHHHHHH--------HHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHH
Confidence 45765433211 01123578889999999999998 87654 57888999999875321 235555
Q ss_pred HHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCCcchhhh
Q 014151 228 DWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDD 307 (430)
Q Consensus 228 ~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~ 307 (430)
++++...+ ++. +.-|....+..+ ++ .|... -+....+.+.||.+++|.|.....+ ..
T Consensus 141 ~~i~~~~~---~~~-~~ki~~~d~~~~----------~~-~~~~~---~l~d~~a~~~v~~ia~H~Y~~~~~~---~~-- 197 (277)
T d1nofa2 141 SYLKSQGS---KFG-SLKVIVAESLGF----------NP-ALTDP---VLKDSDASKYVSIIGGHLYGTTPKP---YP-- 197 (277)
T ss_dssp HHHHHHGG---GGT-TSEEEEEEETTC----------CG-GGTHH---HHTCHHHHTTCCEEEEECTTSCCCC---CH--
T ss_pred HHHHHhhh---ccc-ccceEeehhcCC----------cH-HHhHH---HhhChHHHHHHHHhhccCCCCCccc---ch--
Confidence 55544322 122 233443322111 11 11110 0000113467999999999754211 00
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceeeeec
Q 014151 308 LKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQLF 379 (430)
Q Consensus 308 ~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~ 379 (430)
.++ ..+||++++|.+........+-..-..+.+.+. ..... +..++++|...
T Consensus 198 -------------~~~-~~~K~lw~TE~~~~~~~~~~~w~~a~~~a~~i~----~~l~~--~~~a~~~W~~~ 249 (277)
T d1nofa2 198 -------------LAQ-NAGKQLWMTEHYVDSKQSANNWTSAIEVGTELN----ASMVS--NYSAYVWWYIR 249 (277)
T ss_dssp -------------HHH-HTTCEEEEEEECSCTTSCTTCHHHHHHHHHHHH----HHHHT--TEEEEEEEESB
T ss_pred -------------hhh-CCCccceeEEeeccCCCCcccHHHHHHHHHHHH----HHHHc--CCeeEEEcCCc
Confidence 112 279999999987644332111122222222222 22222 47788888654
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=98.34 E-value=2.4e-06 Score=80.50 Aligned_cols=256 Identities=14% Similarity=0.119 Sum_probs=132.9
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+-- .+++.++.+++ ++.+|++|++.||++.- |+ .+|.++++.||+|++.
T Consensus 2 gi~yg~---~~~n~ps~~~V---v~llks~~i~~VRlY~~---------------d~-------~vL~A~~~~gi~v~lG 53 (306)
T d1ghsa_ 2 GVCYGV---IGNNLPSRSDV---VQLYRSKGINGMRIYFA---------------DG-------QALSALRNSGIGLILD 53 (306)
T ss_dssp EEECCC---CSSSCCCHHHH---HHHHHHHTCCEEEESSC---------------CH-------HHHHHTTTSCCEEEEE
T ss_pred eeeCCC---ccCCCCCHHHH---HHHHHhCCCCEEEEeCC---------------CH-------HHHHHHHhcCCEEEEE
Confidence 777421 22333466666 45678889999999531 22 3677888999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. + -..+. .+ .+..+..++..+.. |.....|-...++||--...
T Consensus 54 v~n~--~------l~~~~---------------~~---~~~a~~~v~~~i~~--------~~~~~~I~~I~VGNEvl~~~ 99 (306)
T d1ghsa_ 54 IGND--Q------LANIA---------------AS---TSNAASWVQNNVRP--------YYPAVNIKYIAAGNEVQGGA 99 (306)
T ss_dssp CCGG--G------HHHHH---------------HC---HHHHHHHHHHHTTT--------TTTTSEEEEEEEEESCCGGG
T ss_pred eccc--h------hhhhc---------------cC---HHHHHHHHHHHHHh--------hCCCceEEEEEecceeccCC
Confidence 7431 0 01111 12 23345556666666 66666799999999975432
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCC-CEEEEccC-CccCCCCCCCcccCccchhhccCcchhhc---cCCCCcceEEeeec
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDKK-HLVTVGLE-GFYGPKSPKRLTVNPEMWASALGSDFIRN---SNNDNIDFASVHIY 294 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp~-~lV~~G~~-g~~~~~~~~~~~~np~~w~~~~g~df~~~---~~~~~iD~~s~H~Y 294 (430)
...+...++.+.+++++..=. ..+++-.. ...+.+ .|..|.... .++... ......|++.+|.|
T Consensus 100 ---~~~l~~a~~~i~~al~~~gl~~i~v~t~~~~~~~~~~-------~p~s~~~f~-~~~~~~~~~~L~~~~d~~~vN~y 168 (306)
T d1ghsa_ 100 ---TQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANS-------FPPSAGVFK-NAYMTDVARLLASTGAPLLANVY 168 (306)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECC-------SSGGGCEES-STHHHHHHHHHHHHTCCEEEECC
T ss_pred ---cchhHHHHHHHHHHHHHCCCCCceeecccccccccCC-------CCCCccccc-hhhhhHHHHHHHhcCCceEeecc
Confidence 345566667777777765432 33333211 111111 121221100 011110 11245688889988
Q ss_pred CCC-CC--C------------Cc--c-hhh---hHHHHHHHHH---HHHHhhhhcCCCcEEEEecCCCCCCC-CCChhHH
Q 014151 295 PDH-WF--H------------DL--E-FED---DLKFVTKWML---SHIEDGDKELNKPVFFTEYGLSNLIK-GFEPSLR 349 (430)
Q Consensus 295 ~~~-w~--~------------~~--~-~~~---~~~~~~~~l~---~~~~~a~~~~gkPv~v~EfG~~~~~~-~~~~~~r 349 (430)
|.. |. + .. . ... ...++..-+. ..+.... ..+|||+|+|.|++..+. +.+.+.+
T Consensus 169 Pyf~~~~~~~~~~l~~alf~~~~~~~~~~~~~~y~n~~d~~~d~~~~A~~~~~-~~~k~ivI~ETGWPS~G~~~as~~na 247 (306)
T d1ghsa_ 169 PYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAG-APAVKVVVSESGWPSAGGFAASAGNA 247 (306)
T ss_dssp HHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHHHHHHHHHHHT-CTTCCEEEEEECCCSSSSTTCCHHHH
T ss_pred hhhhhcCCccccccchhhcCCCCceecCchHHHHHHHHHHHHHHHHHHHHhcC-CCCCceEEcccccccCCCCCCCHHHH
Confidence 842 00 0 00 0 000 0011121121 1122222 258999999999998753 3456777
Q ss_pred HHHHHHHHHHHHHHHhcC----CCcccceeeeeccCCCccCCCC------ceEEcCC
Q 014151 350 DKLYKTILDIVYKSAKRK----RSGAGALIWQLFVEGMEEYNDD------FGIVPWE 396 (430)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~----~~~~G~~~W~~~~~~~~~~~dg------~~i~~~~ 396 (430)
..|++.+.. .+..+ ...+..++....|. .|.+| |+|+..|
T Consensus 248 ~~y~~~l~~----~~~~gt~~r~~~i~~f~FeaFDE---~wK~~~~~E~~wGlf~~d 297 (306)
T d1ghsa_ 248 RTYNQGLIN----HVGGGTPKKREALETYIFAMFNE---NQKTGDATERSFGLFNPD 297 (306)
T ss_dssp HHHHHHHHT----TGGGCCSSCCSCCCEEEECSBCC---TTCCSSGGGGGCCSBCTT
T ss_pred HHHHHHHHH----HHhcCCCCCCCCceEEEEeeeCc---CCCCCCCccCccccCCCC
Confidence 777776553 22221 12345566666664 45433 6777654
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.33 E-value=2.5e-06 Score=82.20 Aligned_cols=174 Identities=16% Similarity=0.182 Sum_probs=95.3
Q ss_pred HHHHHHHHHcCCCEEEEccc--cCC-CCC----ccccCCCCCC------hHHHHHHHHHHHHHHHcCCEEEEeccCCccc
Q 014151 80 GAMLQAGAKMGLTVCRTWAF--NDG-GYN----SLQISPGQFD------ERVFKALDHVIVEARKNGVRLLLSLVNNLQA 146 (430)
Q Consensus 80 ~~~~~~~~~~G~n~vR~~~~--~~g-~~~----~~~~~pg~~d------e~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~ 146 (430)
.+.++.+|+++..++|+..- +++ .|. +....|..++ +..-=.+|++++.|++-|..+++++...
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g--- 113 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLG--- 113 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCS---
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCCCHHHHHHHHHHhCCeEEEEEeCC---
Confidence 45678899999999998542 221 232 1122332211 1111257999999999999999987421
Q ss_pred CCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc---cc-cCCC-ceeEEeecCCCCCCC--
Q 014151 147 YGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV---EY-RNDP-TIFAWELINEPRCMS-- 219 (430)
Q Consensus 147 ~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~---~y-k~~p-~I~~wel~NEp~~~~-- 219 (430)
.|..+.-.+|. +.+-....+.-|. +. ...| .|--|+|+||+....
T Consensus 114 ~~~~~~a~d~v----------------------------ey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~ 165 (367)
T d1qw9a2 114 TRGIDAARNLV----------------------------EYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQI 165 (367)
T ss_dssp SCCHHHHHHHH----------------------------HHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTST
T ss_pred CccHHHHHHHH----------------------------HHHccCCCCHHHHHHHHcCCCCCCCceEEEecccccccccc
Confidence 11112222232 2211111000000 01 1123 588899999986431
Q ss_pred -CCChHHHHHHHHHHHHHHHhcCCCC-EEEEccCCccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCC
Q 014151 220 -DPSGDTLQDWIDEMSAFVKSIDKKH-LVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 220 -~~~~~~~~~w~~~~~~~Ir~~dp~~-lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~ 297 (430)
..+++....-.++.+++||+.||+. +|.+|.... ..+ ....|... + .....+.+|++++|.|...
T Consensus 166 g~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~---~~~-----~~~~w~~~----v-l~~~~~~iD~is~H~Y~~~ 232 (367)
T d1qw9a2 166 GHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNR---NMP-----TFAEWEAT----V-LDHTYDHVDYISLHQYYGN 232 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSCT---TST-----TTTHHHHH----H-HHHHGGGCSEEEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCeeEEEEeCCCC---CCc-----ccchHHHH----H-HhhccccCCcccccCCCCC
Confidence 2245667777888899999999985 455553211 000 01134321 1 1223467999999999754
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=98.21 E-value=5.2e-06 Score=78.11 Aligned_cols=253 Identities=15% Similarity=0.136 Sum_probs=129.7
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+- ..+++.++.+++. +.+|++|++.||++.- |+ .+|++++..||+|++.
T Consensus 2 Gv~yg---~~~~nlps~~~Vv---~lLk~~~i~~IRlY~~---------------d~-------~vL~A~~~~gi~v~lG 53 (306)
T d1aq0a_ 2 GVCYG---MSANNLPAASTVV---SMFKSNGIKSMRLYAP---------------NQ-------AALQAVGGTGINVVVG 53 (306)
T ss_dssp EEECC---CCCSSCCCHHHHH---HHHHHHTCCEEEESSC---------------CH-------HHHHHHTTSCCEEEEE
T ss_pred eeeCC---CccCCCCCHHHHH---HHHHhCCCCEEEEeCC---------------CH-------HHHHHHHhcCCEEEEe
Confidence 77742 1233344666664 4677889999999531 22 3678889999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. + . ..+. ++ .+.....++..+.. | ....|-...++||.....
T Consensus 54 v~n~--~---l---~~~~---------------~~---~~~~~~~v~~~v~~--------~-~~~~I~~i~VGNE~~~~~ 98 (306)
T d1aq0a_ 54 APND--V---L---SNLA---------------AS---PAAAASWVKSNIQA--------Y-PKVSFRYVCVGNEVAGGA 98 (306)
T ss_dssp ECGG--G---H---HHHH---------------HC---HHHHHHHHHHHTTT--------C-TTSEEEEEEEEESCCGGG
T ss_pred ccch--h---h---hhcc---------------CC---HHHHHHHHHHhccc--------c-CCceEEEEEeccEeecCC
Confidence 7431 0 0 1111 12 23344555555554 4 345788899999987543
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCCE-EEEcc-CCccCCCCCCCcccCcc------chhhc--cCcchhhccCCCCcceE
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDKKHL-VTVGL-EGFYGPKSPKRLTVNPE------MWASA--LGSDFIRNSNNDNIDFA 289 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp~~l-V~~G~-~g~~~~~~~~~~~~np~------~w~~~--~g~df~~~~~~~~iD~~ 289 (430)
. ..+..-++.+..++++..-+.+ +++-. ....+.+.| |+ .|... .-.+|. ....|++
T Consensus 99 ~---~~l~~a~~ni~~al~~~gl~~i~vs~~~~~~~~~~s~p------ps~~~f~~~~~~~~~~~~~~l----~~~~~~~ 165 (306)
T d1aq0a_ 99 T---RNLVPAMKNVHGALVAAGLGHIKVTTSVSQAILGVFSP------PSAGSFTGEAAAFMGPVVQFL----ARTNAPL 165 (306)
T ss_dssp G---GGHHHHHHHHHHHHHHTTCTTSEEEEEEEGGGEEECSS------GGGCEECHHHHHHHHHHHHHH----HHHTCCE
T ss_pred c---cchhhHHHHHHHHHHHCCCCceeEEEeecceeeccCCC------CCcceeccchHHHHHHHHHHH----HHcCCee
Confidence 2 3344445666666776543333 33211 111121111 21 11100 001121 2344677
Q ss_pred EeeecCCCC--CCCc--ch-------------hh---hHHHHHHHHHHH---HHhhhhcCCCcEEEEecCCCCCCC-CCC
Q 014151 290 SVHIYPDHW--FHDL--EF-------------ED---DLKFVTKWMLSH---IEDGDKELNKPVFFTEYGLSNLIK-GFE 345 (430)
Q Consensus 290 s~H~Y~~~w--~~~~--~~-------------~~---~~~~~~~~l~~~---~~~a~~~~gkPv~v~EfG~~~~~~-~~~ 345 (430)
.+|.||... ..+. .. +. ....+...+... +.... ..+|||+|+|.|+++.+. ..+
T Consensus 166 ~vN~yPyf~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~~a~~d~~~~al~~~~-~~~k~ivI~EtGWPS~G~~~as 244 (306)
T d1aq0a_ 166 MANIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHG-GSSVKLVVSESGWPSGGGTAAT 244 (306)
T ss_dssp EEECCHHHHHHHCTTSSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTT-CTTCCEEEEECCCCSSSSTTCC
T ss_pred EEecccchhhhcCccccccchhhccCCCceecCcHHHHHHHHHHHHHHHHHHHHHcC-CCCCceEEeccccccCCCCCCC
Confidence 888887420 0000 00 00 001111112221 22222 268999999999998653 346
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC----CCcccceeeeeccCCCccCCCC-----ceEEcCC
Q 014151 346 PSLRDKLYKTILDIVYKSAKRK----RSGAGALIWQLFVEGMEEYNDD-----FGIVPWE 396 (430)
Q Consensus 346 ~~~r~~~~~~~~~~~~~~~~~~----~~~~G~~~W~~~~~~~~~~~dg-----~~i~~~~ 396 (430)
.+.+..|++..+..+ .++ ++.+..++..+.|+ .|.+| |+|+..|
T Consensus 245 ~~na~~y~~~l~~~~----~~gt~~~~~~i~~f~FeaFDE---~wK~g~~E~~wGlf~~d 297 (306)
T d1aq0a_ 245 PANARFYNQHLINHV----GRGTPRHPGAIETYIFAMFNE---NQKDSGVEQNWGLFYPN 297 (306)
T ss_dssp HHHHHHHHHHHHHHT----TTBCSSSBSCCCBEESCSBCC---TTSCSSGGGCCCSBCTT
T ss_pred HHHHHHHHHHHHHHH----hcCCCCCCCCeeEEEEeeeCc---CCCCCCccCeeeeECCC
Confidence 777777777665433 221 12345666666664 45443 6777665
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=98.10 E-value=6.2e-05 Score=70.70 Aligned_cols=120 Identities=14% Similarity=0.095 Sum_probs=70.3
Q ss_pred eeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 60 GWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 60 G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
|+|+- . .+++.++.+++ ++.++++|++.||++.- |+ .+|++++..||+|++.
T Consensus 2 gi~yg--~-~~~nlps~~~v---v~lLk~~~i~~IRlY~~---------------d~-------~vL~A~~~tgi~v~lG 53 (312)
T d2cyga1 2 GVCYG--M-LGNNLPPPSEV---VSLYKSNNIARMRLYDP---------------NQ-------AALQALRNSNIQVLLD 53 (312)
T ss_dssp EEECC--C-CCSSCCCHHHH---HHHHHHTTCCEEEESSC---------------CH-------HHHHHHTTSCCEEEEE
T ss_pred eeeCC--C-ccCCCCCHHHH---HHHHHhCCCCEEEEeCC---------------CH-------HHHHHHHhcCCEEEEe
Confidence 77742 1 23334466666 55678999999999531 22 3677888999999998
Q ss_pred ccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC
Q 014151 140 LVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS 219 (430)
Q Consensus 140 l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~ 219 (430)
+.+. .-..|.. ++. ...+.++..+.. |.....|-+..++||+-...
T Consensus 54 v~n~--------~l~~~~~---------------~~~---~a~~wv~~~v~~--------~~~~~~I~~IaVGNE~l~~~ 99 (312)
T d2cyga1 54 VPRS--------DVQSLAS---------------NPS---AAGDWIRRNVVA--------YWPSVSFRYIAVGNELIPGS 99 (312)
T ss_dssp ECHH--------HHHHHHH---------------CTT---HHHHHHHHHTGG--------GTTTSEEEEEEEEESCTTTS
T ss_pred eccc--------hhhhccC---------------CHH---HHHHHHHHHHhc--------cCCCceEEEEEecCEEeeCC
Confidence 7421 1112221 111 123445555555 55555798999999986543
Q ss_pred CCChHHHHHHHHHHHHHHHhcCC
Q 014151 220 DPSGDTLQDWIDEMSAFVKSIDK 242 (430)
Q Consensus 220 ~~~~~~~~~w~~~~~~~Ir~~dp 242 (430)
......+.+ +..+.+++++..=
T Consensus 100 ~~~~~~lpa-~~~~~~aL~~~g~ 121 (312)
T d2cyga1 100 DLAQYILPA-MRNIYNALSSAGL 121 (312)
T ss_dssp TTGGGHHHH-HHHHHHHHHHTTC
T ss_pred cCchhhccc-HHHHHHHHHHCCC
Confidence 333333433 3345666776543
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.05 E-value=0.00012 Score=69.84 Aligned_cols=246 Identities=17% Similarity=0.123 Sum_probs=126.9
Q ss_pred HHcCCCEEEEcccc-C---CCC--CccccCC----CCCChHHHHHHHHHHHHHHHc---CCEEEEeccCCcccCCCcchh
Q 014151 87 AKMGLTVCRTWAFN-D---GGY--NSLQISP----GQFDERVFKALDHVIVEARKN---GVRLLLSLVNNLQAYGGKTQY 153 (430)
Q Consensus 87 ~~~G~n~vR~~~~~-~---g~~--~~~~~~p----g~~de~~l~~lD~~l~~A~~~---Gi~vil~l~~~w~~~gg~~~y 153 (430)
+-+|++.+|+.+-+ + ..+ ......+ ..++...-+..-.++.+|++. +|+|+.+. |..
T Consensus 35 ~Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~asp---WSp------- 104 (354)
T d2nt0a2 35 EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASP---WTS------- 104 (354)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEE---SCC-------
T ss_pred CCceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcC---CCC-------
Confidence 45999999996532 1 111 1111111 122333333445677777664 57776643 532
Q ss_pred hhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCC-ceeEEeecCCCCCCC------C---CCh
Q 014151 154 VNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDP-TIFAWELINEPRCMS------D---PSG 223 (430)
Q Consensus 154 ~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p-~I~~wel~NEp~~~~------~---~~~ 223 (430)
|.|....+...+.....--..++..+.|.+|+..+++. |+.+. .|-+..+.|||.... . -++
T Consensus 105 P~wMk~n~~~~~~~~~~~~l~~~~~~~yA~Yl~~~v~~--------y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~ 176 (354)
T d2nt0a2 105 PTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDA--------YAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTP 176 (354)
T ss_dssp CGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHH--------HHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCH
T ss_pred chhhhcCCcccCCCCcCCccchhHHHHHHHHHHHHHHH--------HHHcCCCceEeccCcCcCcccCCCCCCCCCCCCH
Confidence 44554332111111011123467889999999999999 88764 577889999996321 1 136
Q ss_pred HHHHHHHHH-HHHHHHhcCCCCEEEEccC-CccCCCCCCCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCC
Q 014151 224 DTLQDWIDE-MSAFVKSIDKKHLVTVGLE-GFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD 301 (430)
Q Consensus 224 ~~~~~w~~~-~~~~Ir~~dp~~lV~~G~~-g~~~~~~~~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~ 301 (430)
+...+++.+ +..++++......+.++.+ .... .+ .+.... +........||.+++|.|... .
T Consensus 177 ~~~~~fi~~~L~~~l~~~g~~~~~~~~~~~~~~~---------~~-~~~~~~---l~d~~~~~~v~~ia~H~Y~~~---~ 240 (354)
T d2nt0a2 177 EHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLL---------LP-HWAKVV---LTDPEAAKYVHGIAVHWYLDF---L 240 (354)
T ss_dssp HHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGG---------TT-HHHHHH---HTSHHHHTTCCEEEEEEETTS---C
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEeeCCcccc---------hH-HHHHHH---hcCHhHHHhcCeEEEecCCCC---C
Confidence 778888875 8888888766543333221 1100 11 111000 000113357999999999753 1
Q ss_pred cchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCC----CCChhHHHHHHHHHHHHHHHHHhcCCCcccceeee
Q 014151 302 LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIK----GFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIWQ 377 (430)
Q Consensus 302 ~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W~ 377 (430)
... .+. +. ...++..+||++++|.+...... ....-.+...+. ..+...... ...++..|.
T Consensus 241 ~~~---~~~----~~---~~~~~~p~k~~w~TE~~~~~~~~~~~~~~~~~~~~~~~a---~~i~~~l~~--~~~a~~~W~ 305 (354)
T d2nt0a2 241 APA---KAT----LG---ETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYS---HSIITNLLY--HVVGWTDWN 305 (354)
T ss_dssp CCH---HHH----HH---HHHHHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHH---HHHHHHHHT--TEEEEEEEE
T ss_pred Cch---hHH----HH---HHHHhCCCceEEeeeeccCCCCCCcccccCcHHHHHHHH---HHHHHHHHh--hhhhheehh
Confidence 111 011 11 11112369999999997643321 011112222222 223333333 478999998
Q ss_pred eccC
Q 014151 378 LFVE 381 (430)
Q Consensus 378 ~~~~ 381 (430)
+..+
T Consensus 306 l~~d 309 (354)
T d2nt0a2 306 LALN 309 (354)
T ss_dssp SEEC
T ss_pred hhcc
Confidence 8643
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=97.97 E-value=0.00011 Score=67.56 Aligned_cols=222 Identities=11% Similarity=0.108 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhh
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVN 155 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~ 155 (430)
.+.+ +.|+......+..+-++.- |. +.+..+...++.+..+|-.++|++.. | ++.
T Consensus 14 ~~ai-~~f~~~~Gr~~~iv~~~~~----w~-----------~~~~~~~~~~~~~~~~g~~~~it~~P-~---~~~----- 68 (273)
T d2v3ga1 14 ESAI-KSFQELQGRKLDIVHQFIN----WS-----------TDFSWVRPYADAVYNNGSILMITWEP-W---EYN----- 68 (273)
T ss_dssp HHHH-HHHHHHHTSCCSEEEEEEE----TT-----------CCHHHHHHHHHHHHHTTCEEEEEEEC-T---TCC-----
T ss_pred HHHH-HHHHHhcCCCceEEEEecc----CC-----------CCchhHHHHHHHHHhCCCeEEEEeCC-C---CCC-----
Confidence 3444 4555556666777766432 31 11344556677888999988888643 2 111
Q ss_pred hhh-hhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCC----------CCChH
Q 014151 156 WAW-EEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMS----------DPSGD 224 (430)
Q Consensus 156 W~~-~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~----------~~~~~ 224 (430)
+.. ..|. .-+.++++.+.+.+ + +.| | .+-+.+|++..- ..+++
T Consensus 69 ~~~ia~G~--------------yD~~i~~~a~~l~~---------~-g~p-v-~~R~~hE~ng~W~~W~~~~~~~~~~p~ 122 (273)
T d2v3ga1 69 TVDIKNGK--------------ADAYITRMAQDMKA---------Y-GKE-I-WLRPLHEANGDWYPWAIGYSSRVNTNE 122 (273)
T ss_dssp HHHHHTTT--------------THHHHHHHHHHHHH---------H-CSC-E-EEEESCCTTSSSSTTSTTCTTCCCCHH
T ss_pred HHHHhCcc--------------hHHHHHHHHHHHHh---------c-CCC-E-EEEecccCCCCcccCCCCCCCCCCCHH
Confidence 110 1110 11222333333322 2 235 3 478999988431 12457
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCC---CCcccCccchhhccCcchhhccCCCCcceEEeeecCCCCCCC
Q 014151 225 TLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSP---KRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHD 301 (430)
Q Consensus 225 ~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~---~~~~~np~~w~~~~g~df~~~~~~~~iD~~s~H~Y~~~w~~~ 301 (430)
.+++-.+.+...+|+...+.++.+=+. .+.... ....+-| .+..+|++++..|... ..
T Consensus 123 ~y~~a~r~v~~~~r~~g~~nv~~vw~p--~~~~~~~~~~~~~yYP---------------GDdyVD~vG~d~Y~~~--~~ 183 (273)
T d2v3ga1 123 TYIAAFRHIVDIFRANGATNVKWVFNV--NCDNVGNGTSYLGHYP---------------GDNYVDYTSIDGYNWG--TT 183 (273)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEBCCE--ESSCCSTTCCSSTTCC---------------CGGGCSBEEEEEEECT--TC
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcC--CCCCCCChhhHHhhCC---------------CCCEEEEEEEeccCCC--Cc
Confidence 788888999999998766666654110 000000 0000111 1356899999999521 11
Q ss_pred cchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHHHHHHhcCCCcccceee
Q 014151 302 LEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIVYKSAKRKRSGAGALIW 376 (430)
Q Consensus 302 ~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~~W 376 (430)
........-...-+....+.++. .+||++|+|+|....+ ..+..|++.+++.+.+. .+.+.+..+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~-~~KPi~i~E~G~~~~~-----~~~~~W~~~~~~~~~~~---~p~v~~~vwf 249 (273)
T d2v3ga1 184 QSWGSQWQSFDQVFSRAYQALAS-INKPIIIAEFASAEIG-----GNKARWITEAYNSIRTS---YNKVIAAVWF 249 (273)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHTT-SSSCEEEEEEEECSTT-----SCHHHHHHHHHHHHHHH---CTTEEEEEEE
T ss_pred ccchhhhhhHHHHHHHHHHHHHh-CCCCEEEEeecCCCCC-----CchhHHHHHHHHHHHhh---CCcEEEEEEe
Confidence 10000000011223334455554 8999999999976643 24678888888766432 2345554443
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.05 E-value=0.085 Score=48.90 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC----CC-----CccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG----GY-----NSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~-----~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+.|+.+|++|+|+|-+-...++ +| ..+.+.-| ..+.|.+++++|+++||+||+++.-
T Consensus 48 Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~gY~~~~~~~id~~~G-----t~~df~~lv~~~h~~gi~VilD~V~ 120 (382)
T d1ea9c3 48 GDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFG-----DKDTLKKLVDLCHERGIRVLLDAVF 120 (382)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTC-----CHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred cCHHHHHHhhHHHHhCCCCEEEeCCCccCCCCCCCCcccccccccccC-----CHHHHHHHHHHHHhhcceEEEeeec
Confidence 35677888899999999999998443221 11 11111112 3567999999999999999999864
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=96.01 E-value=0.13 Score=47.20 Aligned_cols=162 Identities=11% Similarity=0.081 Sum_probs=81.7
Q ss_pred CHHH-HHHHHHHHHHcCCCEEEEccccC-C-----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCc
Q 014151 75 SRAR-VGAMLQAGAKMGLTVCRTWAFND-G-----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNL 144 (430)
Q Consensus 75 ~~~~-~~~~~~~~~~~G~n~vR~~~~~~-g-----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w 144 (430)
+..- +++.++.++++|+|+|-+-.+.+ . +|.. ....| .| ...+.|.++|++|+++||+||+++.-+
T Consensus 38 ~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp-~~--Gt~~d~~~LV~~aH~~gi~VilD~V~N- 113 (396)
T d1m7xa3 38 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTR-RF--GTRDDFRYFIDAAHAAGLNVILDWVPG- 113 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECG-GG--SCHHHHHHHHHHHHHTTCEEEEEECTT-
T ss_pred CHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCc-cc--CCHHHHHHHHHHHhhhhhhhhhccccc-
Confidence 3444 44556999999999999844321 0 1110 01111 11 235678999999999999999987532
Q ss_pred ccCCCcchhhhhhhhh-----CCCCC------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCC-CceeEE---
Q 014151 145 QAYGGKTQYVNWAWEE-----GIGIS------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRND-PTIFAW--- 209 (430)
Q Consensus 145 ~~~gg~~~y~~W~~~~-----G~~~~------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~-p~I~~w--- 209 (430)
..+....+....... ..+.. ......+.+|..+..+.+.++..+.. |+-+ ..+-++
T Consensus 114 -H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~gvDG~R~D~~~~~ 184 (396)
T d1m7xa3 114 -HFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIER--------FGIDALRVDAVASM 184 (396)
T ss_dssp -SCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHH--------SCCCEEEECCSHHH
T ss_pred -ccCCcccccccccCCccccccCCCCCCCCCCCCccccCCCchhHHHHHHHHHHHHHH--------hCCcceeeechhhh
Confidence 111110000000000 00000 01112256788888888877776665 4322 111000
Q ss_pred ------eecCC--CCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 210 ------ELINE--PRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 210 ------el~NE--p~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
...++ +.............+.+++...++...|+..+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 232 (396)
T d1m7xa3 185 IYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAE 232 (396)
T ss_dssp HCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred ccchhcccccccccccccccccchHHHHHHHHHHHHhhhCCCceEEEe
Confidence 00000 00000011233456778888999999999877643
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=95.97 E-value=0.03 Score=55.82 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-------CCCC-----ccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-------GGYN-----SLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-------g~~~-----~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+-+-+.+-|+.++++|+|+|-+-.+.+ .+|. .+.+.=| ..+.|++++++|+++||+||+++.-
T Consensus 111 Dl~Gi~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lG-----t~edl~~Lv~~aH~rGI~VilD~V~ 185 (554)
T d1g5aa2 111 DLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALG-----TIGDLREVIAALHEAGISAVVDFIF 185 (554)
T ss_dssp SHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTC-----CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccC-----CHHHHHHHHHHHHHCCCEEEEEECc
Confidence 456678889999999999999854321 1111 1111112 3678999999999999999999753
Q ss_pred C-------ccc--CCCcchh------------hhhhhhhCCCC--C--------------------CC-CCCCCCCHHHH
Q 014151 143 N-------LQA--YGGKTQY------------VNWAWEEGIGI--S--------------------SS-NDSFFFDPSIH 178 (430)
Q Consensus 143 ~-------w~~--~gg~~~y------------~~W~~~~G~~~--~--------------------~~-~~~f~~d~~~~ 178 (430)
+ |.. ..+.+.| +.+........ . .. ..--+.+|.++
T Consensus 186 NHts~~h~w~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~V~ 265 (554)
T d1g5aa2 186 NHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVF 265 (554)
T ss_dssp SEEETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSSSTTEEEBCTTSHHHH
T ss_pred CCCCCCccchhhhhccCCccccceEEcCCCCCCccccCCCcccCCCCCCcceeecCCCceeecccCCcccccccCCHHHH
Confidence 2 100 0000000 00000000000 0 00 01115689999
Q ss_pred HHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 179 KYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 179 ~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+.+.+.++..+++ .+-|.++-.-+ .+.-++.. .+...+....+++++.+.++...|+.++.
T Consensus 266 ~~~~~~~~~w~~~--gvDGfRlDa~~-----~~~~~~~~-~~~n~p~~~~~~~~~~~~~~~~~p~~~l~ 326 (554)
T d1g5aa2 266 RAMAGEMLFLANL--GVDILRMDAVA-----FIWKQMGT-SCENLPQAHALIRAFNAVMRIAAPAVFFK 326 (554)
T ss_dssp HHHHHHHHHHHTT--TCSEEEETTGG-----GSCCCTTS-CSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHhhhhhhhhc--cccccccccch-----hhcccccc-ccccCchhhHHHHHHHHHHhhhCCCceee
Confidence 9999988888864 23333332111 11112211 11123456678899999999999997654
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=95.94 E-value=0.04 Score=51.33 Aligned_cols=146 Identities=18% Similarity=0.297 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC----CCC-----ccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYN-----SLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNL 144 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~-----~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w 144 (430)
.+-.-+.+-|+.+|++|+|+|-+-...+. +|. .+.+.-| ..+.+.++|++|+++||+||+++.-+
T Consensus 50 G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~G-----t~~d~~~lv~~~H~~Gi~vilD~V~N- 123 (382)
T d1wzla3 50 GDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFG-----DLPTFRRLVDEAHRRGIKIILDAVFN- 123 (382)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTC-----CHHHHHHHHHHHHTTTCEEEEEECCS-
T ss_pred cCHHHHHHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCC-----CHHHHHHHHHHHHhcccceEeeeeec-
Confidence 35677888899999999999998432211 111 1111112 35678999999999999999987532
Q ss_pred ccCCC-c------------chhhhhhhhhCCCCC--------------CCCCC-CCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 145 QAYGG-K------------TQYVNWAWEEGIGIS--------------SSNDS-FFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 145 ~~~gg-~------------~~y~~W~~~~G~~~~--------------~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
..+. . ..|..|......... ....+ -+.+|++++.+.+.++..++. .+.
T Consensus 124 -H~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~--gvD 200 (382)
T d1wzla3 124 -HAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQ--GID 200 (382)
T ss_dssp -BCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHT--TCC
T ss_pred -ccccccccccchhhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHHc--CCC
Confidence 1110 0 011222111000000 00011 256789999888888877654 233
Q ss_pred cccccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 197 GVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
++=+-.-... ...+.+.+...+++.+|+.++.
T Consensus 201 -----------GfR~D~~~~~--------~~~~~~~~~~~~~~~~p~~~~i 232 (382)
T d1wzla3 201 -----------GWRLDVANEV--------DHAFWREFRRLVKSLNPDALIV 232 (382)
T ss_dssp -----------EEEETTGGGS--------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred -----------ceeecchhhc--------chhhhhHHHHHHHhhCCceEEe
Confidence 3333222221 2345677778888899986654
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.89 E-value=0.014 Score=55.67 Aligned_cols=149 Identities=15% Similarity=0.244 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC--C----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND--G----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~--g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
+-.-+.+-|+.++++|+|+|-+-.+.+ . +|... ...| .| -..+.|.++|++|+++||+||+++.-+..
T Consensus 32 d~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp-~~--G~~~d~~~lv~~aH~~gi~VilD~V~NH~ 108 (420)
T d2bhua3 32 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PY--GRPEDLMALVDAAHRLGLGVFLDVVYNHF 108 (420)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCc-cc--CCHHHHHHHHHHHHhcccccccccccccc
Confidence 566777789999999999999844321 0 11110 1111 11 23678999999999999999999874321
Q ss_pred cCCCcchhhhhhhhhCCC------CCCCCCC-CCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCC
Q 014151 146 AYGGKTQYVNWAWEEGIG------ISSSNDS-FFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCM 218 (430)
Q Consensus 146 ~~gg~~~y~~W~~~~G~~------~~~~~~~-f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~ 218 (430)
+.. ..|....+.. ......+ =+.+|++++.+.+.++..++.. .+-|.++---+ .+.++.
T Consensus 109 --~~~---~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~-GVDGfR~D~~~-----~l~~~~--- 174 (420)
T d2bhua3 109 --GPS---GNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDY-HFDGLRLDATP-----YMTDDS--- 174 (420)
T ss_dssp --CSS---SCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHH-CCSEEEETTGG-----GCCCCS---
T ss_pred --CCC---CccccccccccccccccccccccccccChHHHHHHHHHhheeeecc-cccEEEEeeee-----eecccc---
Confidence 100 0121110000 0000011 1678999999999999887430 22222221000 011111
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 219 SDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 219 ~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
...++.++.+.|++.+|+..+.
T Consensus 175 -------~~~~~~~~~~~~~~~~p~~~~i 196 (420)
T d2bhua3 175 -------ETHILTELAQEIHELGGTHLLL 196 (420)
T ss_dssp -------SSCHHHHHHHHHHTTCSCCEEE
T ss_pred -------ccccHHHHHHHHHhhcCCceee
Confidence 1235577888999999988764
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=95.34 E-value=0.016 Score=55.67 Aligned_cols=118 Identities=14% Similarity=0.298 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCc---
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGK--- 150 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~--- 150 (430)
+...++..|+.+|.+|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.
T Consensus 32 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSF--HqCGGNVGD 102 (498)
T d1fa2a_ 32 DKEKVEDELKQVKAGGCDGVMVDVW----WGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSF--HQCGGNVGD 102 (498)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEEC--SCBCCCTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeee----eeEeecCCCCccC---cHHHHHHHHHHHHcCCeeEEEEee--cccCCCCCC
Confidence 5789999999999999999887332 333554 589999 888999999999999999765421 122332
Q ss_pred c---hhhhhhhhhCCCCCCCCCCCCCCH----------------------HHHHHHHHHHHHHHhccCCcccccccC---
Q 014151 151 T---QYVNWAWEEGIGISSSNDSFFFDP----------------------SIHKYFKHYVKTVLTRKNTITGVEYRN--- 202 (430)
Q Consensus 151 ~---~y~~W~~~~G~~~~~~~~~f~~d~----------------------~~~~~~~~~~~~lv~R~n~~tg~~yk~--- 202 (430)
. ..|.|+.+.|. .+.+-||+|+ ...+.|.++.+.+.+. +++
T Consensus 103 ~v~IPLP~WV~~~g~---~~pDi~ftDr~G~rn~EyLSl~~D~~pvl~GRTplq~Y~DFm~SFr~~--------F~~~l~ 171 (498)
T d1fa2a_ 103 AVFIPIPQWILQIGD---KNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDN--------MADFLK 171 (498)
T ss_dssp CCCBCSCHHHHHHTT---TCGGGEEECTTCCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHHHHH--------SHHHHH
T ss_pred ccccCCcHHHHhhhc---cCCCceEEcCCCCcccceeeeecccccccCCCCHHHHHHHHHHHHHHH--------HHHhcc
Confidence 1 14678865442 1122333332 3467778887777766 544
Q ss_pred CCceeEEeec
Q 014151 203 DPTIFAWELI 212 (430)
Q Consensus 203 ~p~I~~wel~ 212 (430)
...|...+++
T Consensus 172 ~g~I~eI~VG 181 (498)
T d1fa2a_ 172 AGDIVDIEVG 181 (498)
T ss_dssp HTCEEEEEEC
T ss_pred CCceEEEEec
Confidence 3466666664
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=95.34 E-value=0.02 Score=52.41 Aligned_cols=66 Identities=15% Similarity=0.120 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC-C---CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG-G---YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g-~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
+...+.+-|+.++++|+|+|-+-.+.+. + |.. ....|..+ -..+.|.++|++|.++||+||+++.-
T Consensus 19 ~~~~i~~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~--G~~~~f~~lv~~~H~~gi~VilD~V~ 91 (347)
T d1ht6a2 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKY--GNAAELKSLIGALHGKGVQAIADIVI 91 (347)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTT--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcccC--CCHHHHHHHHHHHhhcceEEeeeccc
Confidence 5677888899999999999998543221 1 110 01111112 23577899999999999999999753
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=95.27 E-value=0.017 Score=53.50 Aligned_cols=86 Identities=13% Similarity=0.142 Sum_probs=54.2
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCC-----------CCCcc-----ccCCCCCC
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDG-----------GYNSL-----QISPGQFD 115 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g-----------~~~~~-----~~~pg~~d 115 (430)
||..+.+.|++ |-............+.+.|+.+|++|+|+|=+-+..+. .+... ...| .|
T Consensus 14 ~g~~~~~~~f~--w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~-~~- 89 (357)
T d1gcya2 14 GGDEIILQGFH--WNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNG-RY- 89 (357)
T ss_dssp GGCCCEEECCC--TTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCS-SS-
T ss_pred CCCEEEEeeee--cCCCCCCCCcHHHHHHHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCc-cC-
Confidence 66677788885 32211111113567888899999999999987443210 01011 1111 11
Q ss_pred hHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 116 ERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 116 e~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
-..+.|.++|++|+++||+||+++.-
T Consensus 90 -Gt~~df~~LV~~aH~~GI~VIlD~V~ 115 (357)
T d1gcya2 90 -GSDAQLRQAASALGGAGVKVLYDVVP 115 (357)
T ss_dssp -CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred -CCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 23577899999999999999999753
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=95.22 E-value=0.073 Score=49.73 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC------CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG------GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQ 145 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~ 145 (430)
+-.-+.+.|+.++++|+|+|-+-.+.+. +|.. ....| .| -..+.|.+++++|+++||+||+++.-+
T Consensus 27 d~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~-~~--Gt~~dlk~lv~~~h~~gi~VilD~V~N-- 101 (400)
T d1eh9a3 27 TFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SY--GGPEGFRKLVDEAHKKGLGVILDVVYN-- 101 (400)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCS-TT--CCHHHHHHHHHHHHHTTCEEEEEECCS--
T ss_pred CHHHHHHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCc-cc--CCHHHHHHHHHHHHhcCCceeeecccc--
Confidence 5677888899999999999998544221 1111 01112 11 235678999999999999999998542
Q ss_pred cCCCcchhhhhhhhh-------CCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 146 AYGGKTQYVNWAWEE-------GIGIS--SSNDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 146 ~~gg~~~y~~W~~~~-------G~~~~--~~~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
..+.. ..|.... ..... ......+.+|.+++.+.+.++.-++.
T Consensus 102 H~s~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~ 153 (400)
T d1eh9a3 102 HVGPE---GNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKE 153 (400)
T ss_dssp CCCSS---SCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred cccCC---CcchhhhccccccccccccccccccccccccHHHHHHHHHHHHHHhh
Confidence 11100 1122110 00000 01112245688999988888887754
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.11 E-value=0.021 Score=53.87 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccc---CC---CCCc---cccC----CCCCCh--HHHHHHHHHHHHHHHcCCEEEEec
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFN---DG---GYNS---LQIS----PGQFDE--RVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~---~g---~~~~---~~~~----pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
...+++.|+.+|++|+|+|-+-.+. .. ++.. +... +...++ -..+.|.++|++|+++||+||+++
T Consensus 23 ~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 23 WTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5789999999999999999984431 10 1100 0000 001111 135679999999999999999997
Q ss_pred cC
Q 014151 141 VN 142 (430)
Q Consensus 141 ~~ 142 (430)
.-
T Consensus 103 V~ 104 (393)
T d1hvxa2 103 VF 104 (393)
T ss_dssp CC
T ss_pred ec
Confidence 64
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.11 E-value=0.13 Score=47.63 Aligned_cols=148 Identities=16% Similarity=0.280 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAY 147 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~ 147 (430)
+-.-+.+.|+.++++|+|+|-+-..... +|.. ....| .| -..+.|.+++++|+++||+||+++.-+ ..
T Consensus 51 ~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~-~~--Gt~~~~~~lv~~aH~~Gi~VilD~V~N--H~ 125 (382)
T d1j0ha3 51 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDP-HF--GDKETLKTLIDRCHEKGIRVMLDAVFN--HC 125 (382)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEECCS--BC
T ss_pred CHHHHHHhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCC-CC--CCHHHHHHHHHHhhhccceEEEEeeec--cc
Confidence 5667778899999999999998433211 1111 11122 11 125678999999999999999997532 11
Q ss_pred CC-------------cchhhhhhhhhCCCCC-------------CCC-CCCCCCHHHHHHHHHHHHHHHhccCCcccccc
Q 014151 148 GG-------------KTQYVNWAWEEGIGIS-------------SSN-DSFFFDPSIHKYFKHYVKTVLTRKNTITGVEY 200 (430)
Q Consensus 148 gg-------------~~~y~~W~~~~G~~~~-------------~~~-~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~y 200 (430)
+. ...+..|......+.. ... .--+.+|++++.+.+.++..++. |
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~--------~ 197 (382)
T d1j0ha3 126 GYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIRE--------F 197 (382)
T ss_dssp CTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHH--------H
T ss_pred ccccccchhhhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhh--------c
Confidence 10 0112222211100000 001 11256789999999999888765 4
Q ss_pred cCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEE
Q 014151 201 RNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVT 247 (430)
Q Consensus 201 k~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~ 247 (430)
+ |-++=+-.=.. ....+.++....+++..|+..+.
T Consensus 198 g----iDGfR~Da~~~--------~~~~~~~~~~~~~~~~~p~~~~i 232 (382)
T d1j0ha3 198 D----IDGWRLDVANE--------IDHEFWREFRQEVKALKPDVYIL 232 (382)
T ss_dssp C----CCEEEETTGGG--------SCHHHHHHHHHHHHHHCTTCEEE
T ss_pred c----ccEEEecchhh--------cchhhhhhhhhhhhccCCCcccc
Confidence 2 22332221111 12345567777788889987543
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=95.10 E-value=0.015 Score=55.79 Aligned_cols=121 Identities=16% Similarity=0.310 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcc--
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKT-- 151 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~-- 151 (430)
+...++..|+.+|++|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+.- +..||.-
T Consensus 26 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSF--HqCGGNvGD 96 (490)
T d1wdpa1 26 DPDGLKEQLLQLRAAGVDGVMVDVW----WGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSF--HQCGGNVGD 96 (490)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEE----HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEEC--SCBCCSTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeee----eeEeecCCCCccC---hHHHHHHHHHHHHcCCeEEEEEee--cccCCCCCc
Confidence 5789999999999999999987332 333554 589999 888999999999999999665421 1223320
Q ss_pred ----hhhhhhhhhCCC---C------CC----------CCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccC---CCc
Q 014151 152 ----QYVNWAWEEGIG---I------SS----------SNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRN---DPT 205 (430)
Q Consensus 152 ----~y~~W~~~~G~~---~------~~----------~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~---~p~ 205 (430)
..|.|+.+.|.. + +. ...-.+......+.|.++.+.+.+. +++ +..
T Consensus 97 ~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~--------F~~~~~~g~ 168 (490)
T d1wdpa1 97 IVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFREN--------MSDFLESGL 168 (490)
T ss_dssp SCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHH--------THHHHHTTC
T ss_pred ccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHH--------HHHhccCCe
Confidence 146787542110 0 00 0111233344577777777777766 544 446
Q ss_pred eeEEeec
Q 014151 206 IFAWELI 212 (430)
Q Consensus 206 I~~wel~ 212 (430)
|...+++
T Consensus 169 I~eI~VG 175 (490)
T d1wdpa1 169 IIDIEVG 175 (490)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 6666664
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=95.07 E-value=0.019 Score=55.22 Aligned_cols=59 Identities=15% Similarity=0.263 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc-CCCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI-SPGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~-~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
+.+.++..|+.+|++|+.-|=+=++ |-.+|. .|++|| |..+.++++.+++.|||+.+.+
T Consensus 25 ~~~~l~~~L~~LK~~GVdGVmvDvW----WGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vm 84 (500)
T d1b1ya_ 25 KGDELRAQLRKLVEAGVDGVMVDVW----WGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIM 84 (500)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEEE----TTTGGGGSTTCCC---CHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeee----eeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEE
Confidence 5789999999999999999987333 445664 689999 8889999999999999986644
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.04 E-value=0.014 Score=53.95 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC----C--CCCc---ccc-C---CCCCChH--HHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND----G--GYNS---LQI-S---PGQFDER--VFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~----g--~~~~---~~~-~---pg~~de~--~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+...+.+-|+.+|++|+|+|-+-.+.+ . +|.. +.. . ....|+. ..+.|.++|++|+++||+||++
T Consensus 21 ~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~VilD 100 (390)
T d1ud2a2 21 HWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGD 100 (390)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 578888999999999999999854321 0 1110 000 0 0111221 3578999999999999999999
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 101 vV 102 (390)
T d1ud2a2 101 VV 102 (390)
T ss_dssp EC
T ss_pred Ec
Confidence 75
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=94.82 E-value=0.15 Score=47.47 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHH--------HHcCCCEEEEccccCC----CCCcc---ccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 74 YSRARVGAMLQAG--------AKMGLTVCRTWAFNDG----GYNSL---QISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 74 ~~~~~~~~~~~~~--------~~~G~n~vR~~~~~~g----~~~~~---~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.+-.-+.+-|+.+ |++|+|+|-+-...+. +|.+. ...| .| -..+.|.++|++|.++||+||+
T Consensus 24 Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~-~~--G~~~dlk~lv~~~H~~Gi~Vil 100 (409)
T d1wzaa2 24 GDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINP-DY--GTLEDFHKLVEAAHQRGIKVII 100 (409)
T ss_dssp CCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCc-cc--CCHHHHHHHHHHHHhcCCEEEE
Confidence 3556666667766 7999999998543221 11110 1111 11 1256799999999999999999
Q ss_pred eccC
Q 014151 139 SLVN 142 (430)
Q Consensus 139 ~l~~ 142 (430)
++.-
T Consensus 101 D~V~ 104 (409)
T d1wzaa2 101 DLPI 104 (409)
T ss_dssp ECCC
T ss_pred eccc
Confidence 9753
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=93.87 E-value=1.9 Score=39.34 Aligned_cols=149 Identities=11% Similarity=0.146 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------cccc---------------CCCCCChHHHHHHHHHHHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQI---------------SPGQFDERVFKALDHVIVEARK 131 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~~---------------~pg~~de~~l~~lD~~l~~A~~ 131 (430)
.+.+.+.+.++.|+..++|++-+++-.+-+|+ .+.. ..+.|. -+.+.++++.|++
T Consensus 15 ~~~~~ik~~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt---~~e~~~lv~yA~~ 91 (344)
T d1yhta1 15 YSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLS---YRQLDDIKAYAKA 91 (344)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBC---HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCCCCCCcccC---HHHHHHHHHHHHH
Confidence 45789999999999999999988654332342 1100 001233 4568899999999
Q ss_pred cCCEEEEeccCCcccCCCcchhhhhh----------hhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccccccc
Q 014151 132 NGVRLLLSLVNNLQAYGGKTQYVNWA----------WEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYR 201 (430)
Q Consensus 132 ~Gi~vil~l~~~w~~~gg~~~y~~W~----------~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk 201 (430)
+||.||+.+.. +|=......+. ...+.. ....-..++|++.+..++.++++++. |.
T Consensus 92 rgI~viPeiD~----PGH~~~~~~~~p~~~~~~~~~~~~~~~--~~~~l~~~~~~t~~~~~~l~~e~~~~--------F~ 157 (344)
T d1yhta1 92 KGIELIPELDS----PNHMTAIFKLVQKDRGVKYLQGLKSRQ--VDDEIDITNADSITFMQSLMSEVIDI--------FG 157 (344)
T ss_dssp TTCEEEEEEEE----SSSCHHHHHHHHHHHCHHHHHHHBCSS--CTTSBCTTCHHHHHHHHHHHHHHHHH--------HG
T ss_pred cCCEEEeccch----hhHHHHHHHhchhhcCCCCccCCCCCC--CCCcccCCCchhHHHHHHHHHHHHHh--------cC
Confidence 99999997632 22111111110 001110 11223356889999999999999988 65
Q ss_pred CCCceeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 014151 202 NDPTIFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSIDK 242 (430)
Q Consensus 202 ~~p~I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp 242 (430)
+.... +-+ +-|..... .....+..++.++.+.+++.+-
T Consensus 158 ~~~~~--~HiGgDE~~~~~-~~~~~~~~~~~~~~~~~~~~Gk 196 (344)
T d1yhta1 158 DTSQH--FHIGGDEFGYSV-ESNHEFITYANKLSYFLEKKGL 196 (344)
T ss_dssp GGCSE--EEEECCSCCTTS-CCHHHHHHHHHHHHHHHHHTTC
T ss_pred Cccce--EEeechhhhccc-ccchHHHHHHHHHHHHHHHCCC
Confidence 42122 222 34443222 2356678899999999998753
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=93.82 E-value=0.066 Score=50.31 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C---CCCc---cccC----CCCCCh--HHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G---GYNS---LQIS----PGQFDE--RVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g---~~~~---~~~~----pg~~de--~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+..-+.+.|+.+|++|+|+|-+-...+ . +|.. .... ....|+ -..+.|.+++++|+++||+||++
T Consensus 19 ~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD 98 (393)
T d1e43a2 19 HWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGD 98 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 346677889999999999999843311 0 0100 0000 001122 12678999999999999999999
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 99 ~V 100 (393)
T d1e43a2 99 VV 100 (393)
T ss_dssp EC
T ss_pred Ee
Confidence 85
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.73 E-value=0.19 Score=46.75 Aligned_cols=137 Identities=11% Similarity=0.067 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHcCCCEEEEcc-ccCC--CCCccccCCCCCC----hHHHHHHHHHHHHHHHcCCEEEEeccC--CcccCC
Q 014151 78 RVGAMLQAGAKMGLTVCRTWA-FNDG--GYNSLQISPGQFD----ERVFKALDHVIVEARKNGVRLLLSLVN--NLQAYG 148 (430)
Q Consensus 78 ~~~~~~~~~~~~G~n~vR~~~-~~~g--~~~~~~~~pg~~d----e~~l~~lD~~l~~A~~~Gi~vil~l~~--~w~~~g 148 (430)
..++..+.+|++|++-|=+-. +.|| -|+.-. ..|+ ...-+-+.+++++|+++||++-+.++. .|....
T Consensus 100 Da~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~---t~~n~~~~~~~rDiv~el~~A~rk~Glk~G~YyS~~~dw~~~~ 176 (350)
T d1hl9a2 100 DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKY---TDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTT 176 (350)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSS---CSCBTTTSTTCSCHHHHHHHHHHHTTCEECEEECCSCCTTSCC
T ss_pred CHHHHHHHHHHcCCCEEEEEEEecCCcccCCCCC---CCCCCcCCCCCCchHHHHHHHHHhcCCceeEEecccccccccc
Confidence 466778889999999776522 1232 122100 0111 112356889999999999999997764 343221
Q ss_pred CcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCceeEEeecCCCCCCCCCChHHHHH
Q 014151 149 GKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQD 228 (430)
Q Consensus 149 g~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~I~~wel~NEp~~~~~~~~~~~~~ 228 (430)
....++. . ....-...+...+.+...+++|+++ |+ |-++-|+-.-+... ...
T Consensus 177 ~~~~~~~---~-------~~~~~~~~~~y~~~~~~Ql~EL~~~--------Y~--p~~~w~D~~~~~~~-----~~~--- 228 (350)
T d1hl9a2 177 EPIRYPE---D-------LSYIRPNTYEYADYAYKQVMELVDL--------YL--PDVLWNDMGWPEKG-----KED--- 228 (350)
T ss_dssp SCCCSGG---G-------GGTCSCCSHHHHHHHHHHHHHHHHH--------HC--CSCEEECSCCCGGG-----TTH---
T ss_pred CCCCCcc---h-------hcccCccchHHHHHHHHHHHHHHhc--------cC--CceEEecccccccc-----hhh---
Confidence 1111110 0 0001123467888899999999999 95 66665665422111 111
Q ss_pred HHHHHHHHHHhcCCCCEE
Q 014151 229 WIDEMSAFVKSIDKKHLV 246 (430)
Q Consensus 229 w~~~~~~~Ir~~dp~~lV 246 (430)
.+++.+.||+..|+.+|
T Consensus 229 -~~~~~~~i~~~qp~~~i 245 (350)
T d1hl9a2 229 -LKYLFAYYYNKHPEGSV 245 (350)
T ss_dssp -HHHHHHHHHHHCTTCCB
T ss_pred -HHHHHHHHHHhCCCCcc
Confidence 35677889999998765
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=93.37 E-value=0.095 Score=49.01 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccccC--C----CCC---cccc----CCCCCChH--HHHHHHHHHHHHHHcCCEEEEec
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFND--G----GYN---SLQI----SPGQFDER--VFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~~--g----~~~---~~~~----~pg~~de~--~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
...+++.|+.++++|+|+|=+-...+ . +|. .... ..+..++. ..+.|+++|++|+++||+||+++
T Consensus 20 ~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 20 WNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57899999999999999998743211 0 010 0000 00112221 36789999999999999999997
Q ss_pred cC
Q 014151 141 VN 142 (430)
Q Consensus 141 ~~ 142 (430)
.-
T Consensus 100 V~ 101 (394)
T d2d3na2 100 VM 101 (394)
T ss_dssp CC
T ss_pred ec
Confidence 53
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=93.26 E-value=0.068 Score=49.37 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=42.1
Q ss_pred HHHHHHHH-HHHHHcCCCEEEEccccC---C-C-CCccccCCCCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 76 RARVGAML-QAGAKMGLTVCRTWAFND---G-G-YNSLQISPGQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 76 ~~~~~~~~-~~~~~~G~n~vR~~~~~~---g-~-~~~~~~~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
...+.+.+ +.++++|+++|=+-+..+ + . |...++..=..++ -..+.|+++|++|+++||+||+++.
T Consensus 13 ~~~i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy~vd~~~Gt~~dfk~LV~~aH~~GI~VilDvV 86 (354)
T d1g94a2 13 WQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (354)
T ss_dssp HHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcceeCCCCCCHHHHHHHHHHHhccCceeEEEee
Confidence 45565555 569999999999854332 1 1 1122221101111 1257899999999999999999875
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=93.16 E-value=0.05 Score=50.50 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC-C-C-------------CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND-G-G-------------YNS---LQISPGQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~-g-~-------------~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
+-..+.+.|+.++++|+|+|=+-...+ . . |.+ ....| .| -..+.|.++|++|+++||+|
T Consensus 15 ~f~~i~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~-~~--Gt~~df~~LV~~aH~~Gi~V 91 (344)
T d1ua7a2 15 SFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNR-YL--GTEQEFKEMCAAAEEYGIKV 91 (344)
T ss_dssp CHHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEET-TT--EEHHHHHHHHHHHHTTTCEE
T ss_pred cHHHHHHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCC-CC--CCHHHHHHHHHHhcccceeE
Confidence 467788889999999999998743221 0 0 100 00011 11 23567999999999999999
Q ss_pred EEecc
Q 014151 137 LLSLV 141 (430)
Q Consensus 137 il~l~ 141 (430)
|+++.
T Consensus 92 ilD~V 96 (344)
T d1ua7a2 92 IVDAV 96 (344)
T ss_dssp EEEEC
T ss_pred eeccc
Confidence 99975
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=93.09 E-value=2.1 Score=39.49 Aligned_cols=134 Identities=15% Similarity=0.153 Sum_probs=73.5
Q ss_pred eEEeecCCCCCCC------CCChHHHHHHHHHHHHHHHhcC-CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhh
Q 014151 207 FAWELINEPRCMS------DPSGDTLQDWIDEMSAFVKSID-KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIR 279 (430)
Q Consensus 207 ~~wel~NEp~~~~------~~~~~~~~~w~~~~~~~Ir~~d-p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~ 279 (430)
+.|=...|.+..- ..+++.+++..+.+...+|+.. -+.+|.+= +..... ++ .+. .+..
T Consensus 164 Vl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvw-----sp~~~~----~~-~~~-----~~~~ 228 (366)
T d2bvya2 164 IVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAW-----GPGGGF----GG-NRD-----VYLR 228 (366)
T ss_dssp EEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEE-----CCCSCC----TT-CHH-----HHGG
T ss_pred EEEeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEe-----ecCCCC----Cc-ccc-----hhhh
Confidence 3489999987431 1256788888899999999765 46677541 111100 00 000 0000
Q ss_pred c-cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHH
Q 014151 280 N-SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILD 358 (430)
Q Consensus 280 ~-~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~ 358 (430)
- -.+..+|++++-.|... ..... .+.....+....+.++. .+||+.|+|+|........ ......|++++++
T Consensus 229 ~YPGDdyVDivG~D~Y~~~--~~~~~---~~~~~~~l~~~~~~a~~-~~Kp~altE~G~~~~~~~~-~~~~~~W~~~~l~ 301 (366)
T d2bvya2 229 TYPGDAFVDVLGLDTYDST--GSDAF---LAGLVADLRMIAEIADE-KGKVSAFTEFGVSGGVGTN-GSSPAQWFTKVLA 301 (366)
T ss_dssp GCCCTTTCSEECCEEEESS--CCHHH---HHHHHHHHHHHHHHHHH-HTCEECBCEEEETTCSSTT-SCCCTTHHHHHHH
T ss_pred hCCCCCeEEEEEEeccCCC--CCcch---HHHHHHHHHHHHHHHHh-cCCcEEEeceeccCCcccc-CCCcchHHHHHHH
Confidence 0 12467999999999743 11111 11122223333344553 7999999999986543211 1123467777776
Q ss_pred HHHH
Q 014151 359 IVYK 362 (430)
Q Consensus 359 ~~~~ 362 (430)
.+.+
T Consensus 302 ~i~~ 305 (366)
T d2bvya2 302 AIKA 305 (366)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6544
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=93.04 E-value=0.43 Score=44.71 Aligned_cols=135 Identities=7% Similarity=0.071 Sum_probs=72.0
Q ss_pred EEeecCCCCCCC------CCChHHHHHHHHHHHHHHHhcC-CCCEEEEccCCccCCCCCCCcccCccchhhccCcchhhc
Q 014151 208 AWELINEPRCMS------DPSGDTLQDWIDEMSAFVKSID-KKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRN 280 (430)
Q Consensus 208 ~wel~NEp~~~~------~~~~~~~~~w~~~~~~~Ir~~d-p~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~~~ 280 (430)
.|-...|.+..- ..+++.+++..+.+..++|+.. -+.+|-+=+.. ..+.. ....+.. -+
T Consensus 165 l~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~----~~~~~---~~~~~~~----~Y--- 230 (381)
T d1odza_ 165 IFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPN----NFWDV---TEANYLE----RY--- 230 (381)
T ss_dssp EEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCB----CCSSC---CHHHHHS----SC---
T ss_pred EEeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCC----CCCCC---ccccccc----cC---
Confidence 388888877431 1246778888899999999865 46676541110 00000 0000000 00
Q ss_pred cCCCCcceEEeeecCCCCCCCcchhhhHHHHHHHHHHHHHhhhhcCCCcEEEEecCCCCCCCCCChhHHHHHHHHHHHHH
Q 014151 281 SNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIEDGDKELNKPVFFTEYGLSNLIKGFEPSLRDKLYKTILDIV 360 (430)
Q Consensus 281 ~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~~~l~~~~~~a~~~~gkPv~v~EfG~~~~~~~~~~~~r~~~~~~~~~~~ 360 (430)
-.+..+|++++-.|... .... ...+.+...+....+.+++ .+||+.|+|+|....... .......|++.+++.+
T Consensus 231 PGDdyVDivG~D~Y~~~-~~~~---~~~~~~~~~l~~~~~~A~~-~gKp~altE~G~~~~~~~-~~~~~~~W~~~~l~~i 304 (381)
T d1odza_ 231 PGDEWVDVLGFDTYGPV-ADNA---DWFRNVVANAALVARMAEA-RGKIPVISGIGIRAPDIE-AGLYDNQWYRKLISGL 304 (381)
T ss_dssp CCTTTCSEECCEEEECS-SSCH---HHHHHHHHHHHHHHHHHHH-HTCEECBCEEEECHHHHH-TTCCCTTHHHHHHHHH
T ss_pred CCCCeEEEEEeeccCCC-CCch---hHHHHHHHHHHHHHHHHHh-cCCceeeeeccccCCchh-ccCcccchHHHHHHHH
Confidence 02457999999999653 1111 1112223333344444554 799999999997432100 0011245777777766
Q ss_pred HH
Q 014151 361 YK 362 (430)
Q Consensus 361 ~~ 362 (430)
.+
T Consensus 305 ~~ 306 (381)
T d1odza_ 305 KA 306 (381)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=92.93 E-value=0.055 Score=51.03 Aligned_cols=64 Identities=23% Similarity=0.389 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C----------CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G----------GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g----------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
+-.-+.+-|+.++++|+|+|=+-...+ . +|.. ....| .| -..+.|.++|++|+++||+||+
T Consensus 50 d~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~-~~--Gt~~d~k~Lv~~~H~~Gi~Vil 126 (407)
T d1qhoa4 50 DLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HF--GNWTTFDTLVNDAHQNGIKVIV 126 (407)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCCcccCCCCCCCCCceeeeecCCCCC-CC--CCHHHHHHHHHHhhhcccceee
Confidence 566778889999999999999843211 0 0100 01111 11 1356789999999999999999
Q ss_pred ecc
Q 014151 139 SLV 141 (430)
Q Consensus 139 ~l~ 141 (430)
++.
T Consensus 127 D~V 129 (407)
T d1qhoa4 127 DFV 129 (407)
T ss_dssp EEC
T ss_pred ccc
Confidence 875
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=92.63 E-value=3.7 Score=37.51 Aligned_cols=146 Identities=10% Similarity=0.156 Sum_probs=89.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccc---------cCC-CCCChHHHHHHHHHHHHHHHcCCEE
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQ---------ISP-GQFDERVFKALDHVIVEARKNGVRL 136 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~---------~~p-g~~de~~l~~lD~~l~~A~~~Gi~v 136 (430)
.+.+.+.+.++.|+...+|++.+++-.+-+|+ .+. ..| |.|. -+.+.++++.|+++||.|
T Consensus 15 ~~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT---~~di~~iv~ya~~rgI~v 91 (356)
T d1jaka1 15 FGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYT---KAEYKEIVRYAASRHLEV 91 (356)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBC---HHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCccC---HHHHHHHHHHHHHcCCeE
Confidence 46889999999999999999998664333342 111 012 3455 456789999999999999
Q ss_pred EEeccCCcccCCCc----chhhhhhhhhCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHhccCCcccccccCCCc
Q 014151 137 LLSLVNNLQAYGGK----TQYVNWAWEEGIGIS-------SSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGVEYRNDPT 205 (430)
Q Consensus 137 il~l~~~w~~~gg~----~~y~~W~~~~G~~~~-------~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~~yk~~p~ 205 (430)
|+.+.. +|-. ..|+...+ .+.... ....--.++|++.+..++.+++++.- +.+ +.
T Consensus 92 iPEid~----PgH~~~~~~~~pel~~-~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~l--------fp~-~~ 157 (356)
T d1jaka1 92 VPEIDM----PGHTNAALASYAELNC-DGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAAL--------TPG-RY 157 (356)
T ss_dssp EEECCC----SSSCHHHHHHCGGGST-TSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHT--------CCS-SE
T ss_pred eecCCC----cchhHHHHHhCccccc-cCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHh--------ccc-cE
Confidence 997632 1211 11222111 111000 00112235788999999999998886 432 22
Q ss_pred eeEEee-cCCCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 014151 206 IFAWEL-INEPRCMSDPSGDTLQDWIDEMSAFVKSIDK 242 (430)
Q Consensus 206 I~~wel-~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp 242 (430)
| -+ +-|.... ..+.+..|++++.+.+++.+-
T Consensus 158 ~---HiGgDE~~~~---~~~~~~~f~~~~~~~v~~~gk 189 (356)
T d1jaka1 158 L---HIGGDEAHST---PKADFVAFMKRVQPIVAKYGK 189 (356)
T ss_dssp E---ECCCCCCTTS---CHHHHHHHHHHHHHHHHHTTC
T ss_pred E---Eecccccccc---hHHHHHHHHHHHHHHHHHcCC
Confidence 1 22 2332221 246788899999999988653
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.54 E-value=0.078 Score=49.43 Aligned_cols=66 Identities=11% Similarity=0.210 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCC----CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDG----GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g----~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+-|+.++++|+|+|-+-.+.+. +|.. ....| .| -..+.|++++++|+++||+||+++.-
T Consensus 20 Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~-~~--Gt~~d~~~lv~~~h~~gi~VilD~V~ 92 (391)
T d1lwha2 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKA-EY--GSEREFKEMIEAFHDSGIKVVLDLPI 92 (391)
T ss_dssp CCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCc-cc--CCHHHHHHHHHHHHhcCCEEeecccc
Confidence 36677888899999999999998432221 1111 01111 11 13567999999999999999999753
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=92.47 E-value=0.059 Score=50.31 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=50.0
Q ss_pred CCeEEEEEeeeccccccccCCCCCHHHHHHHHHH-HHHcCCCEEEEccccC-----CC--CCccccCCCCCCh--HHHHH
Q 014151 52 DGKALYVNGWNSYWLMDHAVHDYSRARVGAMLQA-GAKMGLTVCRTWAFND-----GG--YNSLQISPGQFDE--RVFKA 121 (430)
Q Consensus 52 ~G~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~n~vR~~~~~~-----g~--~~~~~~~pg~~de--~~l~~ 121 (430)
+|+.+.+.+++ | +...+.+.+.. ++++|+++|=+....+ +. |...++..=..++ -..+.
T Consensus 8 ~~~~~i~~~f~--W---------~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~d 76 (378)
T d1jaea2 8 SGRNSIVHLFE--W---------KWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESA 76 (378)
T ss_dssp TTCEEEEEETT--C---------CHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHH
T ss_pred CCCceEEEecc--C---------cHHHHHHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccceeCCCCCCHHH
Confidence 45556666655 2 35667777875 9999999998854322 10 1112221100111 13578
Q ss_pred HHHHHHHHHHcCCEEEEecc
Q 014151 122 LDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l~ 141 (430)
|.++|++|+++||+||+++.
T Consensus 77 f~~LV~~aH~~GI~VilDvV 96 (378)
T d1jaea2 77 FTDMTRRCNDAGVRIYVDAV 96 (378)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHhcCceeeeeec
Confidence 99999999999999999875
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=92.33 E-value=0.075 Score=50.97 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC--C---CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND--G---GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~--g---~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
.+-.-+.+-|+.++++|+|+|-+-.+.+ . +|.. ..+.| .| -..+.|.++|++|+++||+||+++.-
T Consensus 28 Gd~~Gi~~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~~d~~~vd~-~~--Gt~~df~~Lv~~aH~~Gi~VilD~V~ 101 (478)
T d1m53a2 28 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMK-EY--GTMEDFDSLVAEMKKRNMRLMIDVVI 101 (478)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCcCccCCCCcCc-cc--CCHHHHHHHHHHHHHCCCEEEecccc
Confidence 3566777889999999999999844321 1 1111 01111 11 13577899999999999999999753
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=91.99 E-value=0.087 Score=49.30 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC---C------C---CCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND---G------G---YNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~---g------~---~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+-.-+.+.|+.++++|+|+|=+-.... . . |.. ....| .| -..+.|.+++++|+++||+||++
T Consensus 41 d~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~-~~--Gt~~dfk~lv~~~H~~Gi~VilD 117 (381)
T d2guya2 41 TWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNE-NY--GTADDLKALSSALHERGMYLMVD 117 (381)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECT-TS--CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCccccccccccc-CC--CCHHHHHHHHHHHHhhccceeee
Confidence 566777889999999999999843211 0 0 000 01111 11 23578999999999999999999
Q ss_pred ccC
Q 014151 140 LVN 142 (430)
Q Consensus 140 l~~ 142 (430)
+.-
T Consensus 118 ~V~ 120 (381)
T d2guya2 118 VVA 120 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 753
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=91.79 E-value=0.18 Score=48.17 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC------------------CCCccccCCCCCCh---------HHHHHHHHHHH
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG------------------GYNSLQISPGQFDE---------RVFKALDHVIV 127 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g------------------~~~~~~~~pg~~de---------~~l~~lD~~l~ 127 (430)
+-+-+.+-|+.++++|+|+|=+-.+.+- +|... ..-..|+ -..+.|.++|+
T Consensus 41 d~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~--d~~~vdp~y~~~~~~~Gt~~d~~~LV~ 118 (475)
T d1bf2a3 41 TYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTE--NYFSPDRRYAYNKAAGGPTAEFQAMVQ 118 (475)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBS--CSSCBCGGGCSCCSTTHHHHHHHHHHH
T ss_pred CHHHHHhhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcc--cCCCcCcccccCCCCCCCHHHHHHHHH
Confidence 5666777899999999999998443210 01000 0001122 45778999999
Q ss_pred HHHHcCCEEEEecc
Q 014151 128 EARKNGVRLLLSLV 141 (430)
Q Consensus 128 ~A~~~Gi~vil~l~ 141 (430)
+|+++||+||+++.
T Consensus 119 ~aH~~GIrVilD~V 132 (475)
T d1bf2a3 119 AFHNAGIKVYMDVV 132 (475)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHhcCcEEEEEec
Confidence 99999999999875
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=91.72 E-value=0.061 Score=50.63 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=42.7
Q ss_pred CHHHHHHHHH--HHHHcCCCEEEEcc-ccCC----------------CCCc---cccCCCCCChHHHHHHHHHHHHHHHc
Q 014151 75 SRARVGAMLQ--AGAKMGLTVCRTWA-FNDG----------------GYNS---LQISPGQFDERVFKALDHVIVEARKN 132 (430)
Q Consensus 75 ~~~~~~~~~~--~~~~~G~n~vR~~~-~~~g----------------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~ 132 (430)
+-.-+.+-|+ .+|++|+|+|-+-. +... +|.. ....| .| -..+.|.++|++|+++
T Consensus 53 dl~Gi~~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp-~~--Gt~~dfk~LV~~aH~~ 129 (406)
T d3bmva4 53 DWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNP-YF--GSFTDFQNLINTAHAH 129 (406)
T ss_dssp CHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCc-cc--ccHHHHHHHHHHHHhc
Confidence 5666788888 79999999999832 2100 0110 01111 11 1356789999999999
Q ss_pred CCEEEEecc
Q 014151 133 GVRLLLSLV 141 (430)
Q Consensus 133 Gi~vil~l~ 141 (430)
||+||+++.
T Consensus 130 Gi~VilD~V 138 (406)
T d3bmva4 130 NIKVIIDFA 138 (406)
T ss_dssp TCEEEEEEC
T ss_pred cccceeeee
Confidence 999999975
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=91.71 E-value=0.13 Score=48.47 Aligned_cols=64 Identities=23% Similarity=0.325 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCC--------CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDG--------GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g--------~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-.-+.+-|+.++++|+|+|-+-.+.+. +|.. .+..| .| -..+.|.++|++|+++||+||+++.
T Consensus 51 d~~Gl~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~-~~--Gt~~df~~lv~~~H~~Gi~VilD~V 125 (422)
T d1h3ga3 51 DIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RY--GSNEDFVRLSTEARKRGMGLIQDVV 125 (422)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECT-TT--CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCCccccCCccc-cc--CCHHHHHHHHHHHHHhCccccccCc
Confidence 5666777799999999999998543210 0111 01122 11 2356789999999999999999985
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=91.68 E-value=0.097 Score=48.54 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccc---CC----CCCc-----ccc--CCCCCChH--HHHHHHHHHHHHHHcCCEEEEe
Q 014151 76 RARVGAMLQAGAKMGLTVCRTWAFN---DG----GYNS-----LQI--SPGQFDER--VFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 76 ~~~~~~~~~~~~~~G~n~vR~~~~~---~g----~~~~-----~~~--~pg~~de~--~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
..-+.+.|+.+|++|+|+|=+-+.. .+ +|.. +.+ .++..++. ..+.|.++|++|+++||+||++
T Consensus 27 ~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD 106 (361)
T d1mxga2 27 WDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIAD 106 (361)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3678899999999999999874321 11 1110 000 00111221 2567999999999999999998
Q ss_pred ccC
Q 014151 140 LVN 142 (430)
Q Consensus 140 l~~ 142 (430)
+.-
T Consensus 107 ~V~ 109 (361)
T d1mxga2 107 VVI 109 (361)
T ss_dssp ECC
T ss_pred eee
Confidence 753
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=91.66 E-value=0.085 Score=50.58 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC--C---CCCc---cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND--G---GYNS---LQISPGQFDERVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~--g---~~~~---~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
.+-.-+.+-|+.++++|+|+|-+-.+.+ . +|.. ..+.| .| -..+.|.++|++|+++||+||+++.
T Consensus 28 Gd~~gi~~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~-~~--Gt~~df~~Lv~~aH~~Gi~VilD~V 100 (479)
T d1uoka2 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMN-EF--GTMEDWDELLHEMHERNMKLMMDLV 100 (479)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECG-GG--CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCcCccccCCcCc-cc--CCHHHHHHHHHHHHHCCCEEEeccc
Confidence 3566777789999999999999843321 1 1111 01111 11 1356789999999999999999975
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.50 E-value=0.2 Score=46.82 Aligned_cols=66 Identities=11% Similarity=0.101 Sum_probs=41.0
Q ss_pred HHHHHHHH-HHHHHcCCCEEEEccccCC------C---CCccccCCCCCCh--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 76 RARVGAML-QAGAKMGLTVCRTWAFNDG------G---YNSLQISPGQFDE--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 76 ~~~~~~~~-~~~~~~G~n~vR~~~~~~g------~---~~~~~~~pg~~de--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
...+.+.+ +.++++|+++|=+-...+. . |...++..-..++ -..+.|+++|++|+++||+||+++.
T Consensus 21 ~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDvV 98 (403)
T d1hx0a2 21 WVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAV 98 (403)
T ss_dssp HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCccCCCCCCHHHHHHHHHHHHhcCCEEEEEEe
Confidence 34455544 5599999999987443210 0 1122221111111 1356789999999999999999875
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=90.43 E-value=0.27 Score=48.00 Aligned_cols=68 Identities=10% Similarity=0.166 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccC-C----------CCCc---cccCCCCC-----ChHHHHHHHHHHHHHHHcCC
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFND-G----------GYNS---LQISPGQF-----DERVFKALDHVIVEARKNGV 134 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~-g----------~~~~---~~~~pg~~-----de~~l~~lD~~l~~A~~~Gi 134 (430)
.+..-+.+-|+.+|++|+|+|=+-.+.+ . +|.. +.+.|... .-...+.|.++|++|+++||
T Consensus 117 Gd~~Gi~~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI 196 (572)
T d1gjwa2 117 GTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGI 196 (572)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCc
Confidence 3566677889999999999999843211 0 0100 01111000 01246789999999999999
Q ss_pred EEEEecc
Q 014151 135 RLLLSLV 141 (430)
Q Consensus 135 ~vil~l~ 141 (430)
+||+++.
T Consensus 197 ~VIlDvV 203 (572)
T d1gjwa2 197 RVILDFI 203 (572)
T ss_dssp EEEEEEC
T ss_pred EEEEEee
Confidence 9999875
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=90.02 E-value=0.16 Score=47.44 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccC--------CC-CCc------cccCCCCCChHHHHHHHHHHHHHHHcCCEEEEe
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFND--------GG-YNS------LQISPGQFDERVFKALDHVIVEARKNGVRLLLS 139 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~--------g~-~~~------~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~ 139 (430)
+-.-+.+.|+.++++|+|+|-+-...+ +. +.. ....| .| ...+.|.+++++|+++||+||++
T Consensus 41 ~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~-~~--Gt~~~~k~lv~~aH~~Gi~VilD 117 (381)
T d2aaaa2 41 SWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNS-NF--GTADNLKSLSDALHARGMYLMVD 117 (381)
T ss_dssp CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECT-TT--CCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCccccccccccccc-cc--CCHHHHHHHHHHHhhhhhccccc
Confidence 566788889999999999999844221 00 000 01111 11 23568999999999999999999
Q ss_pred cc
Q 014151 140 LV 141 (430)
Q Consensus 140 l~ 141 (430)
+.
T Consensus 118 ~V 119 (381)
T d2aaaa2 118 VV 119 (381)
T ss_dssp EC
T ss_pred cc
Confidence 75
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=89.43 E-value=0.22 Score=48.31 Aligned_cols=25 Identities=16% Similarity=0.360 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHH-HHcCCEEEEecc
Q 014151 117 RVFKALDHVIVEA-RKNGVRLLLSLV 141 (430)
Q Consensus 117 ~~l~~lD~~l~~A-~~~Gi~vil~l~ 141 (430)
..++.++++|++| +++||+||+++.
T Consensus 177 ~~l~Efk~lV~a~~H~rGIkVIlD~V 202 (563)
T d2fhfa5 177 ARIKEFRTMIQAIKQDLGMNVIMDVV 202 (563)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred hHHHHHHHHHHHHhhccCceeeecCc
Confidence 4578899999987 789999999975
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=89.02 E-value=0.36 Score=48.57 Aligned_cols=61 Identities=21% Similarity=0.211 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCC---CCC--------h--HHHHHHHHHHHHHHHcCCEEEEecc
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPG---QFD--------E--RVFKALDHVIVEARKNGVRLLLSLV 141 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg---~~d--------e--~~l~~lD~~l~~A~~~Gi~vil~l~ 141 (430)
+-..+.+.|..++++|+++|=+-.. ++..|| .|| + -..+.+++++++|+++||+||+++.
T Consensus 15 tF~~~~~~LpYL~~LGVs~IyLsPi-------~~a~~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDiV 87 (653)
T d1iv8a2 15 NFGDVIDNLWYFKDLGVSHLYLSPV-------LMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (653)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCC-------EEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHCCCCEEEECcc-------CCCCCCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5778889999999999999887331 111111 111 1 2467899999999999999999975
Q ss_pred C
Q 014151 142 N 142 (430)
Q Consensus 142 ~ 142 (430)
-
T Consensus 88 p 88 (653)
T d1iv8a2 88 P 88 (653)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=88.93 E-value=0.43 Score=41.78 Aligned_cols=68 Identities=19% Similarity=0.355 Sum_probs=44.3
Q ss_pred EeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEE
Q 014151 59 NGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLL 138 (430)
Q Consensus 59 ~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil 138 (430)
.|+..| +... ..++.++.++.|++.|++ |+|. |- +.+ ..-.++..+.++++++.|+++||+||+
T Consensus 5 LGiSvY-~~~~-----~~e~~~~yi~~a~~~Gf~--~iFT-SL-----~~~--e~~~~~~~~~~~~l~~~a~~~g~~vi~ 68 (244)
T d1x7fa2 5 LGISLY-PEHS-----TKEKDMAYISAAARHGFS--RIFT-CL-----LSV--NRPKEEIVAEFKEIINHAKDNNMEVIL 68 (244)
T ss_dssp EEEEEC-GGGS-----CHHHHHHHHHHHHTTTEE--EEEE-EE-----CCC----------HHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEc-cCCC-----CHHHHHHHHHHHHHCCCC--EEEe-cC-----ccC--CCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 377765 2222 367788999999999999 5443 10 111 112356688999999999999999999
Q ss_pred eccC
Q 014151 139 SLVN 142 (430)
Q Consensus 139 ~l~~ 142 (430)
++..
T Consensus 69 DIsp 72 (244)
T d1x7fa2 69 DVAP 72 (244)
T ss_dssp EECT
T ss_pred EcCH
Confidence 8754
|
| >d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Seed storage protein species: Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]
Probab=85.08 E-value=11 Score=32.70 Aligned_cols=131 Identities=15% Similarity=0.191 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcccc
Q 014151 119 FKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITGV 198 (430)
Q Consensus 119 l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg~ 198 (430)
...|..-|..|+++|+||+|++- |-. | ...+.+....+.+.+.+..+.-- .+-.
T Consensus 62 ~~~l~~dI~~~q~~G~KVllSlG-------G~~---------~-------~~~~~~~~~a~~fa~~~~~~~~~---~~~~ 115 (283)
T d1cnva_ 62 CSFLESQIKECQRMGVKVFLALG-------GPK---------G-------TYSACSADYAKDLAEYLHTYFLS---ERRE 115 (283)
T ss_dssp GGGGHHHHHHHHHTTCEEEEEEE-------CSS---------S-------EECCCSHHHHHHHHHHHHHHHBS---SSSC
T ss_pred hHHHHHHHHHHHhCCCEEEEEec-------CCC---------C-------CcccccHHHHHHHHHHHHHhhcC---cccc
Confidence 34566789999999999999873 210 0 01123444445555544333210 0000
Q ss_pred cccCCCceeEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCCCCCCcccCccchhhccCcchh
Q 014151 199 EYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFI 278 (430)
Q Consensus 199 ~yk~~p~I~~wel~NEp~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~g~~~~~~~~~~~~np~~w~~~~g~df~ 278 (430)
..-++..+-+.++-=|-... .......++.+.+..++.+++.++|......+ |... ..
T Consensus 116 ~~~~~~~lDGiDiD~E~p~~----~~~~~~~~~~l~~l~~~~~~~~~it~AP~~~~-----------~d~~-------~~ 173 (283)
T d1cnva_ 116 GPLGKVALDGIHFDIQKPVD----ELNWDNLLEELYQIKDVYQSTFLLSAAPGCLS-----------PDEY-------LD 173 (283)
T ss_dssp BTTBSCBCSEEEEECSSCSC----STTHHHHHHHHHHHHHHHTCCCEEEECCBSSS-----------SCTT-------TH
T ss_pred ccccccccCcccccccCCCC----cccHHHHHHHHHHHHHhcCCCeEEEeccCCcc-----------Cchh-------hH
Confidence 12233456677776553221 12344555666655566778888887542111 1100 00
Q ss_pred hccCCCCcceEEeeecCCC
Q 014151 279 RNSNNDNIDFASVHIYPDH 297 (430)
Q Consensus 279 ~~~~~~~iD~~s~H~Y~~~ 297 (430)
..+....+|++-+.+|-.+
T Consensus 174 ~~~~~~~~D~i~vq~Yn~~ 192 (283)
T d1cnva_ 174 NAIQTRHFDYIFVRFYNDR 192 (283)
T ss_dssp HHHTTTCCSEEEEECSSCT
T ss_pred HHhhcccccEEEEEeccCC
Confidence 1123467999999999654
|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]
Probab=84.23 E-value=2.2 Score=37.76 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCcc
Q 014151 117 RVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTIT 196 (430)
Q Consensus 117 ~~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~t 196 (430)
..++..+..|..|+++||||+|++-. |.. +. | -.. -+++.++.|.+.+..++..
T Consensus 64 ~~~~~~~~~i~~~q~~g~KvllsigG-~~~--~~----------~------~~~--~~~~~~~~F~~~~~~~~~~----- 117 (285)
T d2ebna_ 64 HLLTNRAKYLKPLQDKGIKVILSILG-NHD--RS----------G------IAN--LSTARAKAFAQELKNTCDL----- 117 (285)
T ss_dssp HHHHTHHHHTHHHHHTTCEEEEEEEC-CSS--SC----------C------TTC--BCHHHHHHHHHHHHHHHHH-----
T ss_pred hhhhhHHHHHHHHHhCCCEEEEEecc-CCC--Cc----------c------ccc--CCHHHHHHHHHHHHHHHHH-----
Confidence 45667788899999999999999843 211 00 0 001 1577788888888888888
Q ss_pred cccccCCCceeEEeecCCCC----CCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccC
Q 014151 197 GVEYRNDPTIFAWELINEPR----CMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLE 251 (430)
Q Consensus 197 g~~yk~~p~I~~wel~NEp~----~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G~~ 251 (430)
|.-|--=+=||--.-.. .....+.+.+..+++++ |+.-|+.+|++...
T Consensus 118 ---y~lDGiDiD~Ey~~~~~~~~~~~~~~~~~~~~~li~eL----r~~~~~~~lt~a~~ 169 (285)
T d2ebna_ 118 ---YNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYET----KQAMPNKLVTVYVY 169 (285)
T ss_dssp ---HTCCEEEEECCSCCCCSSCCTTBCCCCHHHHHHHHHHH----HHHCTTSEEEEEES
T ss_pred ---cCCcEEeccccCccccCCCccccCcchHHHHHHHHHHH----HHHCCCCeEEEEEe
Confidence 76553222333211111 00112344555555554 55557888887643
|
| >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Putative cytoplasmic protein STM4435 species: Salmonella typhimurium [TaxId: 90371]
Probab=82.53 E-value=1.6 Score=37.93 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEccccCCCCCccccCCCCCChHHHHHHHHHHHHHHHcCCEEEEeccC
Q 014151 75 SRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQISPGQFDERVFKALDHVIVEARKNGVRLLLSLVN 142 (430)
Q Consensus 75 ~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l~~ 142 (430)
..+.+++.++.++++|..+||++..... ...-.+...+.|.++.+.|+++|+++.+-.++
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~--------~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~ 141 (271)
T d2q02a1 82 VVKKTEGLLRDAQGVGARALVLCPLNDG--------TIVPPEVTVEAIKRLSDLFARYDIQGLVEPLG 141 (271)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSS--------BCCCHHHHHHHHHHHHHHHHTTTCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCCCC--------ccchHHHHHHHHHHHHHHhccCCeEEEEeecC
Confidence 3567888999999999999998542211 11123567789999999999999999887654
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=82.32 E-value=1 Score=41.26 Aligned_cols=121 Identities=11% Similarity=0.146 Sum_probs=70.9
Q ss_pred EEeeeccccccccCCCCCHHHHHHHHHHHHHcCCCEEEEccccCCCCC----ccccCCCCCChHHHHHHHHHHHHHHHcC
Q 014151 58 VNGWNSYWLMDHAVHDYSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN----SLQISPGQFDERVFKALDHVIVEARKNG 133 (430)
Q Consensus 58 ~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~----~~~~~pg~~de~~l~~lD~~l~~A~~~G 133 (430)
+.|.|.|...... .+++.+.+.++.|++.|++.|=+ .+ .|. .+++.+.+| ..+..+++.++++|
T Consensus 7 P~gwnsW~~~~~~---i~e~~i~~~a~~~~~~g~~~i~i---Dd-gW~~~~gd~~~d~~~F-----Pglk~l~~~~h~~G 74 (348)
T d1zy9a2 7 PTGWCSWYHYFLD---LTWEETLKNLKLAKNFPFEVFQI---DD-AYEKDIGDWLVTRGDF-----PSVEEMAKVIAENG 74 (348)
T ss_dssp CEEEESHHHHGGG---CCHHHHHHHHHHGGGTTCSEEEE---CT-TSEEETTEEEEECTTC-----CCHHHHHHHHHHTT
T ss_pred CCEEechhhhCCC---CCHHHHHHHHHHHHcCCCcEEEE---Cc-ccccCCCCceECcccC-----cCHHHHHHHHHhcC
Confidence 4588865433222 36899999999999999997655 33 342 223333344 35788999999999
Q ss_pred CEEEEeccCCcccCCC--cchhhhhhhhhCC-CC-C---CCC---CCCCCCHHHHHHHHHHHHHHHh
Q 014151 134 VRLLLSLVNNLQAYGG--KTQYVNWAWEEGI-GI-S---SSN---DSFFFDPSIHKYFKHYVKTVLT 190 (430)
Q Consensus 134 i~vil~l~~~w~~~gg--~~~y~~W~~~~G~-~~-~---~~~---~~f~~d~~~~~~~~~~~~~lv~ 190 (430)
|++.|-+...+..... ....+.|...... +. . ... .--+++|++++.+.+.++.+.+
T Consensus 75 ~k~gl~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~~ 141 (348)
T d1zy9a2 75 FIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRK 141 (348)
T ss_dssp CEEEEEECTTEEETTCHHHHHCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeeeccccCCcHHHHhCccceeccCCCCccccccCCCCeeccCCCcHHHHHHHHHHHHHHHh
Confidence 9999876543211111 1112333321100 00 0 000 0115789999999999988765
|
| >d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Bacterial chitobiase (beta-N-acetylhexosaminidase) species: Serratia marcescens [TaxId: 615]
Probab=81.61 E-value=2.1 Score=40.34 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccc-----------------c--------CCCCCChHHHHH
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQ-----------------I--------SPGQFDERVFKA 121 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~-----------------~--------~pg~~de~~l~~ 121 (430)
.+.+.+.+.++.|+...+|++-+++-.+-+|+ .+. + ..|.|. -+.
T Consensus 15 ~~~~~ik~~id~ma~~KlN~lH~HltD~qg~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~YT---~~e 91 (443)
T d1qbaa3 15 HKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFS---RQD 91 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECBCSSCBCBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTSCSSCEECCBC---HHH
T ss_pred cCHHHHHHHHHHHHHcCCcEEEEEEecCCCceeeeCCcchhhhhcccccccccccccccccccCCCCCCCCccC---HHH
Confidence 46889999999999999999998664332331 110 0 012354 456
Q ss_pred HHHHHHHHHHcCCEEEEec
Q 014151 122 LDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 122 lD~~l~~A~~~Gi~vil~l 140 (430)
+.++++.|+++||+||+.+
T Consensus 92 i~eiv~yA~~rgI~vIPEI 110 (443)
T d1qbaa3 92 YIDIIKYAQARQIEVIPEI 110 (443)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCEEeecc
Confidence 7899999999999999965
|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]
Probab=81.39 E-value=2.9 Score=36.60 Aligned_cols=99 Identities=14% Similarity=0.222 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHcCCEEEEeccCCcccCCCcchhhhhhhhhCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhccCCccc
Q 014151 118 VFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGISSSNDSFFFDPSIHKYFKHYVKTVLTRKNTITG 197 (430)
Q Consensus 118 ~l~~lD~~l~~A~~~Gi~vil~l~~~w~~~gg~~~y~~W~~~~G~~~~~~~~~f~~d~~~~~~~~~~~~~lv~R~n~~tg 197 (430)
.+......|..|+++||||+|++-. |.... | -.. ..+++.++.|.+.+..++..
T Consensus 63 ~~~~~~~~i~~l~~~g~KvllsiGG-~~~~~------------~------f~~-~~s~~~~~~Fa~~~~~~~~~------ 116 (265)
T d1edta_ 63 VLDNAVTQIRPLQQQGIKVLLSVLG-NHQGA------------G------FAN-FPSQQAASAFAKQLSDAVAK------ 116 (265)
T ss_dssp HHHTHHHHTHHHHHTTCEEEEEEEE-CTTSC------------C------TTC-CSSHHHHHHHHHHHHHHHHH------
T ss_pred hhhhHHHHHHHHHhCCCEEEEEEcc-CcCCC------------C------cee-cCCHHHHHHHHHHHHHHHHh------
Confidence 3456667788899999999998743 31100 0 011 35788888899988888888
Q ss_pred ccccCCCceeEEeecCCC--CCCCCCChHHHHHHHHHHHHHHHhcCCCCEEEEc
Q 014151 198 VEYRNDPTIFAWELINEP--RCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVG 249 (430)
Q Consensus 198 ~~yk~~p~I~~wel~NEp--~~~~~~~~~~~~~w~~~~~~~Ir~~dp~~lV~~G 249 (430)
|+=|--=+-||.-.-. ... ..+.+.+..++++ +|+.=|+.+|++.
T Consensus 117 --~~~DGiDiD~Eyp~~~~~~~~-~~d~~~~~~ll~~----lR~~l~~~~is~a 163 (265)
T d1edta_ 117 --YGLDGVDFDDEYAEYGNNGTA-QPNDSSFVHLVTA----LRANMPDKIISLY 163 (265)
T ss_dssp --HTCCEEEEECSSCCTTGGGCC-CCCSSHHHHHHHH----HHHHCTTSEEEEE
T ss_pred --cCCCceEeccccCcccCCCCC-cccHHHHHHHHHH----HHHhhhhcEEEEE
Confidence 7644333345532111 111 1123455555555 4555578888764
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.97 E-value=2.9 Score=38.30 Aligned_cols=115 Identities=14% Similarity=0.060 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCC-------ccc------cCCCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYN-------SLQ------ISPGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~-------~~~------~~pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.+.+.+.+.++.|+...+|++-++.-.+-+|+ .+. +..+.|. -+.+.++++.|+++||.||+.+
T Consensus 15 ~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT---~~d~~elv~yA~~rgI~vIPEi 91 (362)
T d2gjxa1 15 LPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYT---AQDVKEVIEYARLRGIRVLAEF 91 (362)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBC---HHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeccCCCchhhhcCCcCCCCCccC---HHHHHHHHHHHHHcCCEEEecc
Confidence 45789999999999999999998664332342 110 1123455 3568899999999999999976
Q ss_pred cCCcccCCCcchhhhhhhh--hCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHhc
Q 014151 141 VNNLQAYGGKTQYVNWAWE--EGIGISSS-NDSFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 141 ~~~w~~~gg~~~y~~W~~~--~G~~~~~~-~~~f~~d~~~~~~~~~~~~~lv~R 191 (430)
...=+...-...|+..... .+...... ...-...+++.+..++.+++++.-
T Consensus 92 D~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~l 145 (362)
T d2gjxa1 92 DTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSV 145 (362)
T ss_dssp CCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHhChhhcCcccCCCCCCCcccccCCCcHHHHHHHHHHHHHHHHh
Confidence 3210000000112211100 00000000 001124567888888999998876
|
| >d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.72 E-value=2.9 Score=38.12 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCcccc------------C-CCCCChHHHHHHHHHHHHHHHcCCEEEEec
Q 014151 74 YSRARVGAMLQAGAKMGLTVCRTWAFNDGGYNSLQI------------S-PGQFDERVFKALDHVIVEARKNGVRLLLSL 140 (430)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~n~vR~~~~~~g~~~~~~~------------~-pg~~de~~l~~lD~~l~~A~~~Gi~vil~l 140 (430)
.+.+.+.+.++.|+..++|++-++.-.+-+|+ ++. + .+.|.. +.+.++++.|+++||.||+.+
T Consensus 15 ~~~~~lk~~id~ma~~K~N~lhlHl~D~~~~~-~e~~~~P~l~~~g~~~~~~~yT~---~d~~~lv~yA~~rgI~iiPEi 90 (353)
T d1nowa1 15 LPVKIILKTLDAMAFNKFNVLHWHIVDDQSFP-YQSITFPELSNKGSYSLSHVYTP---NDVRMVIEYARLRGIRVLPEF 90 (353)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCC-BCCSSCHHHHHHHSSSTTSCBCH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCcEEEEEEecCCCce-eccCCCcchhhcCCCCCCCCcCH---HHHHHHHHHHHHCCCEEEecc
Confidence 45789999999999999999988653332342 211 1 234553 567889999999999999976
Q ss_pred cCCcccCCCcchhhhhhhh---hCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHhc
Q 014151 141 VNNLQAYGGKTQYVNWAWE---EGIGISSSND----SFFFDPSIHKYFKHYVKTVLTR 191 (430)
Q Consensus 141 ~~~w~~~gg~~~y~~W~~~---~G~~~~~~~~----~f~~d~~~~~~~~~~~~~lv~R 191 (430)
.. +|-......+... .......... .-.++|++.+.+++.++++++-
T Consensus 91 d~----PGH~~~~~~~~pel~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~v~~e~~~~ 144 (353)
T d1nowa1 91 DT----PGHTLSWGKGQKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEV 144 (353)
T ss_dssp EE----SSSCTTHHHHSTTCEEECCC----CCSEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred cc----hhhHHHHHHHhhhhcCCccccCCcCCCccccCCCchhhHHHHHHHHHHHHHh
Confidence 32 1211111111000 0000000000 1134688888999999999887
|