Citrus Sinensis ID: 014170

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MVEPEAEKKKKGTSYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFETSHSNFLFYL
cccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccEEccccccEEEEccccccc
ccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccccHHHHHHHcHHcccHHHHHHHccccEEEEEEEcccccccccccccccccccccccccHHHccccccHHHHccccccccHHHcccccccccccccHHHHcccccccccccccccccccccEEEEccccccHccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHccEHHHHHHHHHHHHHHHHHccccHHccccccHHHHcccEEEccccEEEEc
mvepeaekkkkgtsyKTRWSLLVGALIAILIAVALAYAlkspnlshfapadkschcaqekdkysgvvedcccdyetvnQLNEQVlhpslqelvktpffRYFKVKlwcdcpfwpddgmcrlrdcsvcecpetefpesfkkpfirglssddlacqegkpeaavdrtldsqafrgwtetdnpwthddetdnaeMTYVNLqlnperytgytgpsarRIWDAiysencptypskqlcQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQaeyetgnpmedlkTQSLMKQLlynpqlqaacplpfdeaklwkgqrgpelkQKIQGQFRNISALMDCVgcekcrlwgklqvLGLGTALKILFSVngeehlsqtvsitsngrfetshsnflfyl
mvepeaekkkkgtsyktRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEtefpesfkkpfIRGLSSDDLACQEGkpeaavdrtldsqafrgwtetdnpwthddetdNAEMTYVNLqlnperytgytgPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQaeyetgnpmEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQtvsitsngrfetshsnflfyl
MVEPEAEKKKKGTSYKTRWSllvgaliailiavalayalKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKlisglhssisihiAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFETSHSNFLFYL
**************YKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGL***********************AFRGWTET***W********AEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYE***********SLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSI************FL***
******************WSLLVGALIAILIAVALAYALKSP**********SCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKK***************************SQAFRGWTETDNPWTHDDETDNAEMTYVNL****************RIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVN***********TSNGRFETSHSNFLFYL
**************YKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFETSHSNFLFYL
*************SYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDD*******PEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFETSHSNFLFYL
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVEPEAEKKKKGTSYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFETSHSNFLFYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query429 2.2.26 [Sep-21-2011]
Q7X9I4472 Endoplasmic oxidoreductin yes no 0.934 0.849 0.735 1e-178
Q9C7S7469 Endoplasmic oxidoreductin no no 0.869 0.795 0.759 1e-177
A5PJN2468 ERO1-like protein alpha O yes no 0.850 0.779 0.382 5e-71
Q6DD71465 ERO1-like protein alpha O N/A no 0.822 0.759 0.390 1e-69
Q86YB8467 ERO1-like protein beta OS yes no 0.773 0.710 0.4 1e-69
B6CVD7468 ERO1-like protein alpha O yes no 0.843 0.773 0.387 1e-69
Q8R2E9467 ERO1-like protein beta OS yes no 0.778 0.715 0.393 3e-69
Q96HE7468 ERO1-like protein alpha O no no 0.848 0.777 0.383 3e-69
Q8R4A1464 ERO1-like protein alpha O yes no 0.797 0.737 0.393 6e-69
Q8R180464 ERO1-like protein alpha O no no 0.797 0.737 0.391 2e-68
>sp|Q7X9I4|ERO2_ARATH Endoplasmic oxidoreductin-2 OS=Arabidopsis thaliana GN=AERO2 PE=1 SV=1 Back     alignment and function desciption
 Score =  623 bits (1607), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/408 (73%), Positives = 352/408 (86%), Gaps = 7/408 (1%)

Query: 9   KKKGTSYKTRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQ-EKDKYSGVV 67
           K+KG+    RW LL+GA+ A+L+AV +A  L + N S      K C+C Q E+ KY G+V
Sbjct: 12  KEKGSG--KRWILLIGAIAAVLLAVVVAVFLNTQNSSISEFTGKICNCRQAEQQKYIGIV 69

Query: 68  EDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCE 127
           EDCCCDYETVN+LN +VL+P LQ+LVKTPF+RYFKVKLWCDCPFWPDDGMCRLRDCSVCE
Sbjct: 70  EDCCCDYETVNRLNTEVLNPLLQDLVKTPFYRYFKVKLWCDCPFWPDDGMCRLRDCSVCE 129

Query: 128 CPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETD 187
           CPE+EFPE FKKP    LS  +  CQEGKP+A VDRTLD++AFRGWT TDNPWT DDETD
Sbjct: 130 CPESEFPEVFKKP----LSQYNPVCQEGKPQATVDRTLDTRAFRGWTVTDNPWTSDDETD 185

Query: 188 NAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHS 247
           N EMTYVNL+LNPERYTGY GPSARRIW+AIYSENCP + S+  CQEE+ILYKL+SGLHS
Sbjct: 186 NDEMTYVNLRLNPERYTGYIGPSARRIWEAIYSENCPKHTSEGSCQEEKILYKLVSGLHS 245

Query: 248 SISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQ 307
           SIS+HIA+DYLLDEA NLWGQNLTL+YDRVLRYPDRV+NLYFTFLFVLRAVTKA +YL +
Sbjct: 246 SISVHIASDYLLDEATNLWGQNLTLLYDRVLRYPDRVQNLYFTFLFVLRAVTKAEDYLGE 305

Query: 308 AEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNI 367
           AEYETGN +EDLKT+SL+KQ++ +P+ +AACP+PFDEAKLWKGQRGPELKQ+++ QFRNI
Sbjct: 306 AEYETGNVIEDLKTKSLVKQVVSDPKTKAACPVPFDEAKLWKGQRGPELKQQLEKQFRNI 365

Query: 368 SALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSN 415
           SA+MDCVGCEKCRLWGKLQ+LGLGTALKILF+VNGE++L   + +  N
Sbjct: 366 SAIMDCVGCEKCRLWGKLQILGLGTALKILFTVNGEDNLRHNLELQRN 413
Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. Acts by oxidizing directly PDI isomerase through a direct disulfide exchange. Does not act as a direct oxidant of folding substrate, but relies on PDI to transfer oxidizing equivalent. Does not oxidize all PDI related proteins, suggesting that it can discriminate between PDI and related proteins. Its reoxidation probably involves electron transfer to molecular oxygen via FAD. Acts independently of glutathione. May be responsible for a significant proportion of reactive oxygen species (ROS) in the cell, thereby being a source of oxidative stress.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 8EC: .EC: 4EC: .EC: -
>sp|Q9C7S7|ERO1_ARATH Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1 Back     alignment and function description
>sp|A5PJN2|ERO1A_BOVIN ERO1-like protein alpha OS=Bos taurus GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|Q6DD71|ERO1A_XENLA ERO1-like protein alpha OS=Xenopus laevis GN=ero1l PE=2 SV=1 Back     alignment and function description
>sp|Q86YB8|ERO1B_HUMAN ERO1-like protein beta OS=Homo sapiens GN=ERO1LB PE=1 SV=2 Back     alignment and function description
>sp|B6CVD7|ERO1A_PIG ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|Q8R2E9|ERO1B_MOUSE ERO1-like protein beta OS=Mus musculus GN=Ero1lb PE=2 SV=1 Back     alignment and function description
>sp|Q96HE7|ERO1A_HUMAN ERO1-like protein alpha OS=Homo sapiens GN=ERO1L PE=1 SV=2 Back     alignment and function description
>sp|Q8R4A1|ERO1A_RAT ERO1-like protein alpha OS=Rattus norvegicus GN=Ero1l PE=1 SV=1 Back     alignment and function description
>sp|Q8R180|ERO1A_MOUSE ERO1-like protein alpha OS=Mus musculus GN=Ero1l PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
255587744513 Endoplasmic oxidoreductin-1 precursor, p 0.946 0.791 0.815 0.0
356530543465 PREDICTED: endoplasmic oxidoreductin-2-l 0.948 0.875 0.802 0.0
356556515465 PREDICTED: endoplasmic oxidoreductin-2-l 0.953 0.879 0.795 0.0
359483898487 PREDICTED: endoplasmic oxidoreductin-1-l 0.923 0.813 0.768 0.0
297740752499 unnamed protein product [Vitis vinifera] 0.923 0.793 0.768 0.0
449433609469 PREDICTED: endoplasmic oxidoreductin-1-l 0.916 0.837 0.79 0.0
357450507464 Endoplasmic oxidoreductin-1 [Medicago tr 0.918 0.849 0.788 0.0
449530012458 PREDICTED: endoplasmic oxidoreductin-1-l 0.904 0.847 0.792 0.0
224056607481 predicted protein [Populus trichocarpa] 0.958 0.854 0.739 0.0
147841803 589 hypothetical protein VITISV_002206 [Viti 0.925 0.674 0.735 0.0
>gi|255587744|ref|XP_002534381.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] gi|223525406|gb|EEF28005.1| Endoplasmic oxidoreductin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/412 (81%), Positives = 372/412 (90%), Gaps = 6/412 (1%)

Query: 1   MVEPEAEKKKKGTSYKT-RWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQE 59
           MV  E EKKK+ +  K  RW +++GA+IA++ A   A ++ +PN++ F   ++SC C Q 
Sbjct: 1   MVGSEPEKKKRNSEGKQWRW-VVIGAIIALIFAFTTA-SITTPNINLFGQPNESCSCPQ- 57

Query: 60  KDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCR 119
             KYSG+VEDCCCDYETV++LNE+VLHPSLQ+LVKTPFFRYFKVKLWCDCPFWPDDGMCR
Sbjct: 58  --KYSGMVEDCCCDYETVDRLNEEVLHPSLQDLVKTPFFRYFKVKLWCDCPFWPDDGMCR 115

Query: 120 LRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP 179
           LRDCSVCECPE EFPESF+ PF  GL SD+L CQEGKP+AAVDRTLDS+AFRGWTE DNP
Sbjct: 116 LRDCSVCECPEGEFPESFRTPFRGGLPSDNLLCQEGKPQAAVDRTLDSKAFRGWTEIDNP 175

Query: 180 WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILY 239
           WT+DDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDA+YSENCP YPS++LCQEERILY
Sbjct: 176 WTNDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPRYPSEELCQEERILY 235

Query: 240 KLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVT 299
           KLISGLHSSISIHIAADYLLDE+ NLWGQNLTLMYDRVLRYPDRVRNLYF+FLFVLRAVT
Sbjct: 236 KLISGLHSSISIHIAADYLLDESKNLWGQNLTLMYDRVLRYPDRVRNLYFSFLFVLRAVT 295

Query: 300 KAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQK 359
           KAAEYLEQAEY+TGNP EDL+T SLM+QLLYN +LQAACPLPFDEAKLWKGQRGPELKQK
Sbjct: 296 KAAEYLEQAEYDTGNPTEDLRTHSLMRQLLYNSKLQAACPLPFDEAKLWKGQRGPELKQK 355

Query: 360 IQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVS 411
           IQ +FRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFS NG EHL QT+S
Sbjct: 356 IQERFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSDNGREHLGQTLS 407

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356530543|ref|XP_003533840.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|356556515|ref|XP_003546570.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|359483898|ref|XP_002271644.2| PREDICTED: endoplasmic oxidoreductin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740752|emb|CBI30934.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433609|ref|XP_004134590.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357450507|ref|XP_003595530.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] gi|355484578|gb|AES65781.1| Endoplasmic oxidoreductin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449530012|ref|XP_004171991.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224056607|ref|XP_002298934.1| predicted protein [Populus trichocarpa] gi|222846192|gb|EEE83739.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147841803|emb|CAN62205.1| hypothetical protein VITISV_002206 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
TAIR|locus:2207031469 ERO1 "endoplasmic reticulum ox 0.946 0.865 0.676 1.8e-158
ZFIN|ZDB-GENE-060929-744488 zgc:153032 "zgc:153032" [Danio 0.414 0.364 0.398 2.6e-65
UNIPROTKB|E1C917467 ERO1LB "Uncharacterized protei 0.370 0.340 0.416 3.7e-64
UNIPROTKB|E1C0W7463 ERO1L "Uncharacterized protein 0.412 0.382 0.373 7.7e-64
UNIPROTKB|E1C542463 ERO1L "Uncharacterized protein 0.412 0.382 0.373 7.7e-64
UNIPROTKB|F8WFP9464 Ero1l "ERO1-like protein alpha 0.393 0.364 0.384 2e-63
RGD|621713464 Ero1l "ERO1-like (S. cerevisia 0.393 0.364 0.384 5.4e-63
MGI|MGI:1914725467 Ero1lb "ERO1-like beta (S. cer 0.375 0.344 0.385 8.8e-63
UNIPROTKB|Q86YB8467 ERO1LB "ERO1-like protein beta 0.370 0.340 0.387 8.8e-63
UNIPROTKB|Q96HE7468 ERO1L "ERO1-like protein alpha 0.393 0.361 0.382 1.1e-62
TAIR|locus:2207031 ERO1 "endoplasmic reticulum oxidoreductins 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
 Identities = 280/414 (67%), Positives = 323/414 (78%)

Query:     3 EPEAEKKKKGTSYKTRWSXXXXXXXXXXXXXXXXXXXKSPNLSHFAPADKSCHCAQEKD- 61
             E E+EKK+K      RW                     + N+  F     SC C+ +K  
Sbjct:     8 EEESEKKRK----TWRWPLATLVVVFLAVAVSSRT---NSNVGFFFSDRNSCSCSLQKTG 60

Query:    62 KYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLR 121
             KY G++EDCCCDYETV+ LN +VL+P LQ+LV TPFFRY+KVKLWCDCPFWPDDGMCRLR
Sbjct:    61 KYKGMIEDCCCDYETVDNLNTEVLNPLLQDLVTTPFFRYYKVKLWCDCPFWPDDGMCRLR 120

Query:   122 DCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNPWT 181
             DCSVCECPE EFPE FKKPF+ GL SDDL CQEGKP+ AVDRT+D++AFRGW ET NPWT
Sbjct:   121 DCSVCECPENEFPEPFKKPFVPGLPSDDLKCQEGKPQGAVDRTIDNRAFRGWVETKNPWT 180

Query:   182 HDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKX 241
             HDD+TD+ EM+YVNLQLNPERYTGYTGPSARRIWD+IYSENCP Y S + C E+++LYK 
Sbjct:   181 HDDDTDSGEMSYVNLQLNPERYTGYTGPSARRIWDSIYSENCPKYSSGETCPEKKVLYKL 240

Query:   242 XXXXXXXXXXXXAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKA 301
                         AADYLLDE+ N WGQN+ LMYDR+LR+PDRVRN+YFT+LFVLRAVTKA
Sbjct:   241 ISGLHSSISMHIAADYLLDESRNQWGQNIELMYDRILRHPDRVRNMYFTYLFVLRAVTKA 300

Query:   302 AEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQ 361
               YLEQAEY+TGN  EDLKTQSL+KQLLY+P+LQ ACP+PFDEAKLW+GQ GPELKQ+IQ
Sbjct:   301 TAYLEQAEYDTGNHAEDLKTQSLIKQLLYSPKLQTACPVPFDEAKLWQGQSGPELKQQIQ 360

Query:   362 GQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSN 415
              QFRNISALMDCVGCEKCRLWGKLQV GLGTALKILFSV  ++   QT+ +  N
Sbjct:   361 KQFRNISALMDCVGCEKCRLWGKLQVQGLGTALKILFSVGNQDIGDQTLQLQRN 414
GO:0003756 "protein disulfide isomerase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0016671 "oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006984 "ER-nucleus signaling pathway" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
ZFIN|ZDB-GENE-060929-744 zgc:153032 "zgc:153032" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C917 ERO1LB "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0W7 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C542 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F8WFP9 Ero1l "ERO1-like protein alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|621713 Ero1l "ERO1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914725 Ero1lb "ERO1-like beta (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q86YB8 ERO1LB "ERO1-like protein beta" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q96HE7 ERO1L "ERO1-like protein alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7X9I4ERO2_ARATH1, ., 8, ., 4, ., -0.73520.93470.8495yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.40.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
pfam04137348 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreduct 1e-152
COG5061425 COG5061, ERO1, Oxidoreductin, endoplasmic reticulu 5e-63
>gnl|CDD|217920 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Back     alignment and domain information 
 Score =  434 bits (1119), Expect = e-152
 Identities = 163/329 (49%), Positives = 215/329 (65%), Gaps = 14/329 (4%)

Query: 83  QVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDD-GMCRLRDCSVCECPETEFPESFKKPF 141
           + + P L  L  T FFRYFKV L  +CPFWPDD G+C  R C+VC C E+E PE +K   
Sbjct: 1   EKIRPLLNSLTSTDFFRYFKVNLDKECPFWPDDNGLCGSRACAVCTCDESEIPEVWKPSE 60

Query: 142 IRGLSSDDLACQEGKPEAAVDRTL-DSQAFRGWTETDNP--WTHDDETDNAEMTYVNLQL 198
           +     +  AC+EGK    +D +L D +A   W +TD+   +   D+ D+ +  YV+L L
Sbjct: 61  L-----EGSACKEGKDFGELDCSLSDCRASCKWKDTDDLDDYCVVDDEDSDKGVYVDLLL 115

Query: 199 NPERYTGYTGPSARRIWDAIYSENCPTY--PSKQLCQEERILYKLISGLHSSISIHIAAD 256
           NPER+TGY GPSA RIW AIY ENC          C E+R+ Y+LISGLH+SIS H++AD
Sbjct: 116 NPERFTGYKGPSAARIWRAIYEENCFPIGKVDNTCCLEKRVFYRLISGLHASISTHLSAD 175

Query: 257 YLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPM 316
           YL D+    WG NL L ++RV  +PDR+RNLYFT+  VLRA+ K   YLE   + TGN +
Sbjct: 176 YLNDK-TGKWGPNLELFFERVGNHPDRLRNLYFTYALVLRALAKLKPYLENFTFNTGNDL 234

Query: 317 EDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGC 376
           ED +T+ L+K LL   +L ++ P  FDE  L+K     +LK++ + +FRNIS +MDCVGC
Sbjct: 235 EDTETKLLLKDLLS--ELNSSSPKHFDENLLFKNDEAIKLKEEFRRRFRNISRIMDCVGC 292

Query: 377 EKCRLWGKLQVLGLGTALKILFSVNGEEH 405
           EKCRLWGKLQ  GLGTALKILF  + ++H
Sbjct: 293 EKCRLWGKLQTNGLGTALKILFEDDNKQH 321

Members of this family are required for the formation of disulphide bonds in the ER. Length = 348
>gnl|CDD|227393 COG5061, ERO1, Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 429
KOG2608469 consensus Endoplasmic reticulum membrane-associate 100.0
PF04137357 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 100.0
COG5061425 ERO1 Oxidoreductin, endoplasmic reticulum membrane 100.0
>KOG2608 consensus Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=4.4e-139  Score=1055.69  Aligned_cols=391  Identities=49%  Similarity=0.894  Sum_probs=353.8

Q ss_pred             CchHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccccCCCccccccccCcccchHhHHHhhhhhhhhhhHHhhcCC
Q 014170           17 TRWSLLVGALIAILIAVALAYALKSPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTP   96 (429)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~   96 (429)
                      +||.++++++.++.+++.++.        .|  .+..|||+     +.|+|+||+|+++|||++|+++|+|+|+.|+++|
T Consensus         2 ~r~~~l~~l~~~~~l~~~v~~--------~~--~~~~~~ck-----~~~~i~dc~c~~~~i~nln~~~i~~~lq~l~ksd   66 (469)
T KOG2608|consen    2 KRAIALLGLIAAVKLISVVNT--------QF--ASSICFCK-----VDGIIEDCTCDYETIDNLNNEVIYPLLQKLLKSD   66 (469)
T ss_pred             chhHHHHHHHHHHHHHHhccc--------cc--cccceeee-----cccccccCCCCHHHHHHhhccccchHHHHHhccc
Confidence            458888888888888887652        11  12689999     7799999999999999999999999999999999


Q ss_pred             CceeEeeeCCCCCCCCCCCCCCCCCCCccccCCCCCCCcCCCcccccCCCCC-cchhccCCC-ccccccccchhhccCCc
Q 014170           97 FFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSD-DLACQEGKP-EAAVDRTLDSQAFRGWT  174 (429)
Q Consensus        97 fFRyfKVnL~~~CPFW~dd~~C~~~~C~V~~c~e~eiP~~wr~~~~~~~~~~-~~~c~~~~~-~~~vd~~l~~~~~~~w~  174 (429)
                      |||||||||+++||||+||+||++++|+|++|+|+|||++|++. .++++.+ -..|..+.+ .+++|++++.++|..|.
T Consensus        67 ffryYkvnL~~~CpFW~Dd~~C~~r~C~V~~c~e~evPe~~k~~-~~~~~~~~~~e~~~~~~~~~~~d~tl~dr~f~~w~  145 (469)
T KOG2608|consen   67 FFRYYKVNLYRDCPFWPDDGMCLNRACSVEPCPEDEVPEGWKKS-LGKYEPELCSECEDADSELGAKDRTLSDRAFLLWD  145 (469)
T ss_pred             chhheeccccCCCCCCCchhhhhhcCCccccCcccccchhhhhh-hhccChhhhhhhhhccccccchhcccccccccccc
Confidence            99999999999999999999999999999999999999999994 3344432 234555655 78899999999999999


Q ss_pred             ccCCC-CCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHhhhcCCCCC------C------cchhhHHHHHHHH
Q 014170          175 ETDNP-WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYP------S------KQLCQEERILYKL  241 (429)
Q Consensus       175 ~~d~~-~~~~de~~~~~~~YVDL~~NPERyTGY~G~~A~~IW~aIY~ENCf~~~------~------~~~C~EkrvfyRL  241 (429)
                      .+|+. ||+.|++++++++||||++||||||||+|++|+|||++||+||||++.      .      +++|+|||+||||
T Consensus       146 ~~d~~~~C~~dd~~s~~~~YVdLl~NPERyTGY~G~sa~rIW~sIYeeNCf~~~~~~~~~~~~~~~l~g~clEkrvfYrL  225 (469)
T KOG2608|consen  146 KHDDLSFCEVDDEESPEMVYVDLLLNPERYTGYKGPSAARIWRSIYEENCFKPDPLFDPNSIPYNWLEGLCLEKRVFYRL  225 (469)
T ss_pred             ccCCccceeecCCCCCCcEEEehhcChhhhcCCCCCCHHHHHHHHHHhhCCCCCcccCCcccccchhccccHHHHHHHHH
Confidence            99997 999988888999999999999999999999999999999999999875      1      5899999999999


Q ss_pred             hhhhhHHHHHHHHhhhccccccCcCCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHhhhhhhccCCCCccccHHH
Q 014170          242 ISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEYETGNPMEDLKT  321 (429)
Q Consensus       242 ISGLHaSIs~Hi~~~Yl~d~~~~~w~pNl~~f~~Rv~~~PeRl~NLYF~Y~lvLRAl~Ka~p~L~~~~f~tg~~~eD~~t  321 (429)
                      ||||||||+||||++|++-+.+..||||+++|++||++||+||+||||+|++|+|||.||+|||++.+|+||+..||++|
T Consensus       226 ISGlHsSIstHl~~~~y~~~e~~~WgpNl~~f~~Rf~~~P~Rl~NlYF~Yll~lrAl~Ki~pyl~~~~~~tgn~~eD~e~  305 (469)
T KOG2608|consen  226 ISGLHSSISTHLCSFYYLLEETKRWGPNLDLFRARFGNGPDRLRNLYFTYLLVLRALGKIAPYLEELDFYTGNVEEDAET  305 (469)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcccccCcCHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhcchhhhhhhcccccccchHH
Confidence            99999999999999666444444799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccccccccCCCCCccccccCCC-CcchHHHHHHHhhhhhhhhhcCccCCccccchhhhhhHHHHHHHHhhcc
Q 014170          322 QSLMKQLLYNPQLQAACPLPFDEAKLWKGQ-RGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSV  400 (429)
Q Consensus       322 ~~lv~~Ll~~~~~~~sc~~~FDE~~lF~~~-~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKlQt~GLgTALKILF~~  400 (429)
                      +.+|.++++..+   +||.||||+.||.|+ .++.||++||+|||||||||||||||||||||||||+||||||||||+.
T Consensus       306 k~~i~~il~~i~---~~p~hFdE~~~f~gd~~a~~lKe~fr~hFrnISrIMDCVgCdKCRLWGKlQt~GlGTALKILfs~  382 (469)
T KOG2608|consen  306 KSLLSDILSQIK---AFPKHFDEAELFAGDSEAPALKEEFRKHFRNISRIMDCVGCDKCRLWGKLQTQGLGTALKILFSV  382 (469)
T ss_pred             HHHHHHHHHHHh---hCccccchHhhhcccccchhHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhhhhHHHHHHHhcc
Confidence            999999998754   599999999999998 7899999999999999999999999999999999999999999999998


Q ss_pred             CCCcC---CCCCccccccceeeeeccccc
Q 014170          401 NGEEH---LSQTVSITSNGRFETSHSNFL  426 (429)
Q Consensus       401 ~~~~~---~~~~~~L~R~EiVAL~N~~~~  426 (429)
                      .+.++   .+..++|+|+|||||||++-|
T Consensus       383 ~~~~~~~~~s~~~~LtR~EvVAL~N~FgR  411 (469)
T KOG2608|consen  383 KDADPFTQLSESLELTRNEVVALVNTFGR  411 (469)
T ss_pred             CCCCcccccchhhhhhHHHHHHHHHHHHH
Confidence            87542   334689999999999999865

>PF04137 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1); InterPro: IPR007266 Members of this family are required for the formation of disulphide bonds in the endoplasmic reticulum [, ] Back     alignment and domain information
>COG5061 ERO1 Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
3ahq_A465 Hyperactive Human Ero1 Length = 465 3e-60
3ahr_A465 Inactive Human Ero1 Length = 465 4e-60
3nvj_A393 Crystal Structure Of The C143aC166A MUTANT OF ERO1P 1e-38
3m31_A388 Structure Of The C150aC295A MUTANT OF S. CEREVISIAE 3e-38
1rq1_A386 Structure Of Ero1p, Source Of Disulfide Bonds For O 4e-38
1rp4_A389 Structure Of Ero1p, Source Of Disulfide Bonds For O 5e-36
>pdb|3AHQ|A Chain A, Hyperactive Human Ero1 Length = 465 Back     alignment and structure 
Iteration: 1

 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/395 (36%), Positives = 207/395 (52%), Gaps = 53/395 (13%)
Query: 50  ADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDC 109
           A + C C     + SG ++DC CD ET+++ N   L P LQ+L+++ +FRY+KV L   C
Sbjct: 28  AAQRCFC-----QVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPC 82
Query: 110 PFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLACQEGKPE---AAVDRTLD 166
           PFW D   C  RDC+V      E P+  K    +     +   +E +      AVD +L 
Sbjct: 83  PFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLS 142
Query: 167 SQ---AFRGWTETDNP---WTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYS 220
            +   A   WT+ D+    +   D+  + E  YV+L LNPERYTGY GP A +IW+ IY 
Sbjct: 143 EETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIWNVIYE 202
Query: 221 ENC--------PTYP--SKQ--------------LCQEERILYKXXXXXXXXXXXXXAAD 256
           ENC        P  P  S Q              LC E+R  Y+             +A 
Sbjct: 203 ENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSAR 262
Query: 257 YLLDEA--NNLWGQNLTLM---YDRVL---RYPDRVRNLYFTFLFVLRAVTKAAEYLEQA 308
           YLL E      WG N+T     +D +L     P R++NLYF +L  LRA++K   + E+ 
Sbjct: 263 YLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERP 322
Query: 309 EYE--TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPELKQKIQGQF 364
           +++  TGN ++D + + L+ ++L+  +   + PL FDE   + G +    +LK+  +  F
Sbjct: 323 DFQLFTGNKIQDEENKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKEDFRLHF 379
Query: 365 RNISALMDCVGCEKCRLWGKLQVLGLGTALKILFS 399
           RNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS
Sbjct: 380 RNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFS 414
>pdb|3AHR|A Chain A, Inactive Human Ero1 Length = 465 Back     alignment and structure
>pdb|3NVJ|A Chain A, Crystal Structure Of The C143aC166A MUTANT OF ERO1P Length = 393 Back     alignment and structure
>pdb|3M31|A Chain A, Structure Of The C150aC295A MUTANT OF S. CEREVISIAE ERO1P Length = 388 Back     alignment and structure
>pdb|1RQ1|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 386 Back     alignment and structure
>pdb|1RP4|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 389 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 1e-145
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 1e-135
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Length = 465 Back     alignment and structure
 Score =  420 bits (1080), Expect = e-145
 Identities = 148/414 (35%), Positives = 216/414 (52%), Gaps = 51/414 (12%)

Query: 41  SPNLSHFAPADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRY 100
             +     P   +  C     + SG ++DC CD ET+++ N   L P LQ+L+++ +FRY
Sbjct: 17  GRHGEEQPPETAAQRCFC---QVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRY 73

Query: 101 FKVKLWCDCPFWPDDGMCRLRDCSVCECPETEFPESFKKPFIRGLSSDDLA---CQEGKP 157
           +KV L   CPFW D   C  RDC+V      E P+  K    +     +      ++ + 
Sbjct: 74  YKVNLKRPCPFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAER 133

Query: 158 EAAVDRTLDSQ---AFRGWTETDNPWT---HDDETDNAEMTYVNLQLNPERYTGYTGPSA 211
             AVD +L  +   A   WT+ D+        D+  + E  YV+L LNPERYTGY GP A
Sbjct: 134 LGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDA 193

Query: 212 RRIWDAIYSENCPTYPSKQ------------------------LCQEERILYKLISGLHS 247
            +IW+ IY ENC    + +                        LC E+R  Y+LISGLH+
Sbjct: 194 WKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHA 253

Query: 248 SISIHIAADYLLDEA--NNLWGQNLTLMYDRVLR------YPDRVRNLYFTFLFVLRAVT 299
           SI++H++A YLL E      WG N+T    R          P R++NLYF +L  LRA++
Sbjct: 254 SINVHLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALS 313

Query: 300 KAAEYLEQAEYE--TGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQR--GPE 355
           K   + E+ +++  TGN ++D + + L+ ++L       + PL FDE   + G +    +
Sbjct: 314 KVLPFFERPDFQLFTGNKIQDEENKMLLLEIL---HEIKSFPLHFDENSFFAGDKKEAHK 370

Query: 356 LKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQT 409
           LK+  +  FRNIS +MDCVGC KCRLWGKLQ  GLGTALKILFS     ++ ++
Sbjct: 371 LKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKLIANMPES 424
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} PDB: 1rp4_A* 1rq1_A* 3nvj_A* Length = 388 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 100.0
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 100.0
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Back     alignment and structure
Probab=100.00  E-value=9.7e-141  Score=1090.70  Aligned_cols=370  Identities=41%  Similarity=0.764  Sum_probs=292.8

Q ss_pred             CCCCcccccCCCccccccccCcccchHhHHHhhhhhhhhhhHHhhcCCCceeEeeeCCCCCCCCCCCCCCCCCCCccccC
Q 014170           49 PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCEC  128 (429)
Q Consensus        49 ~~~~~c~c~~~~~~~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~dd~~C~~~~C~V~~c  128 (429)
                      ++.+.|||+     ++|+|+||||+|+|||++|+.+|+|+|++|+++||||||||||+++||||+|++||++++|+|++|
T Consensus        27 ~~~~~c~c~-----~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V~~c  101 (465)
T 3ahq_A           27 TAAQRCFCQ-----VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPA  101 (465)
T ss_dssp             ----CEEEE-----CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC---------------
T ss_pred             CCCCCcccC-----CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCeeecC
Confidence            566789999     999999999999999999997799999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCcccccCCCCC----cchhccCCCccccccccch---hhccCCcccCCC---CCCCCCCCCCcceEeeCCC
Q 014170          129 PETEFPESFKKPFIRGLSSD----DLACQEGKPEAAVDRTLDS---QAFRGWTETDNP---WTHDDETDNAEMTYVNLQL  198 (429)
Q Consensus       129 ~e~eiP~~wr~~~~~~~~~~----~~~c~~~~~~~~vd~~l~~---~~~~~w~~~d~~---~~~~de~~~~~~~YVDL~~  198 (429)
                      +|+|||++||++.. +++..    ...|++...++.||++++.   ..+.+|.++|++   +|..|++++++++||||++
T Consensus       102 ~e~eiP~~wr~~~~-~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdLl~  180 (465)
T 3ahq_A          102 QSDEVPDGIKSASY-KYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLL  180 (465)
T ss_dssp             ----------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEGGG
T ss_pred             CcccCChhhccccc-ccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEeccc
Confidence            99999999998643 23221    1247666667889998884   578889887653   4544444668999999999


Q ss_pred             CCCCCCCCCCCChhhhHHHHhhhcCCCCCC------------------------cchhhHHHHHHHHhhhhhHHHHHHHH
Q 014170          199 NPERYTGYTGPSARRIWDAIYSENCPTYPS------------------------KQLCQEERILYKLISGLHSSISIHIA  254 (429)
Q Consensus       199 NPERyTGY~G~~A~~IW~aIY~ENCf~~~~------------------------~~~C~EkrvfyRLISGLHaSIs~Hi~  254 (429)
                      ||||||||+|++|+|||++||+||||++.+                        +++|+|||||||||||||||||||||
T Consensus       181 NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~Hl~  260 (465)
T 3ahq_A          181 NPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLS  260 (465)
T ss_dssp             SCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999997542                        68999999999999999999999999


Q ss_pred             hhhcccc--ccCcCCCCHHHHHHHh------hccccchhhHHHHHHHHHHHHHHHHhhhhhhcc--CCCCccccHHHHHH
Q 014170          255 ADYLLDE--ANNLWGQNLTLMYDRV------LRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEY--ETGNPMEDLKTQSL  324 (429)
Q Consensus       255 ~~Yl~d~--~~~~w~pNl~~f~~Rv------~~~PeRl~NLYF~Y~lvLRAl~Ka~p~L~~~~f--~tg~~~eD~~t~~l  324 (429)
                      ++|++++  .++.|+||+++|++||      |+|||||+||||+|+||||||+||+|||.++.|  +|||..+|.+|+++
T Consensus       261 ~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk~~  340 (465)
T 3ahq_A          261 ARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKML  340 (465)
T ss_dssp             HTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHHHH
T ss_pred             HHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHHHH
Confidence            9999765  2789999999999997      579999999999999999999999999997666  99999999999999


Q ss_pred             HHHHhccccccccCCCCCccccccCCC--CcchHHHHHHHhhhhhhhhhcCccCCccccchhhhhhHHHHHHHHhhccCC
Q 014170          325 MKQLLYNPQLQAACPLPFDEAKLWKGQ--RGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNG  402 (429)
Q Consensus       325 v~~Ll~~~~~~~sc~~~FDE~~lF~~~--~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKlQt~GLgTALKILF~~~~  402 (429)
                      |.+|++..   .+||.+|||+.||++.  .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.++
T Consensus       341 l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~~~  417 (465)
T 3ahq_A          341 LLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKL  417 (465)
T ss_dssp             HHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhccCc
Confidence            99999853   4799999999999984  678999999999999999999999999999999999999999999998765


Q ss_pred             CcC-----CCCCccccccceeeeecccccc
Q 014170          403 EEH-----LSQTVSITSNGRFETSHSNFLF  427 (429)
Q Consensus       403 ~~~-----~~~~~~L~R~EiVAL~N~~~~~  427 (429)
                      .++     ....++|+|+|||||||||.||
T Consensus       418 ~~~~~~~~~~~~~~L~R~ElVALiNtf~Rl  447 (465)
T 3ahq_A          418 IANMPESGPSYEFHLTRQEIVSLFNAFGRI  447 (465)
T ss_dssp             HHTCCSSSCCSSCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccHHHHHHHHHHHHHH
Confidence            321     1235799999999999999886
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 429
d1rp4a_374 a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p 1e-142
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 374 Back     information, alignment and structure

class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  409 bits (1053), Expect = e-142
 Identities = 101/351 (28%), Positives = 175/351 (49%), Gaps = 16/351 (4%)

Query: 74  YETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFW-PDDGMCRLRDCSVCECPETE 132
           +  +N +NE +    L  L+K+ FF+YF++ L+  C FW  +DG+C  R CSV    + +
Sbjct: 3   FNELNAINENI-RDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 61

Query: 133 -FPESFKKPFIRGLSSDDLACQEGKPEAAVDRTLDSQAFRGWTETDNP--WTHDDETDNA 189
             PE ++   +   ++D +   +   +         Q  +   + ++   +   ++ +  
Sbjct: 62  TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGK 121

Query: 190 EMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSI 249
               ++L  NPER+TGY G  A +IW  IY +NC T         +   Y+L+SG H+SI
Sbjct: 122 NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASI 181

Query: 250 SIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAE 309
             H++ +YL  +    W  NL L   R+  +PDRV N+YF +  V +A+ K   YL +  
Sbjct: 182 GTHLSKEYLNTKTGK-WEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240

Query: 310 YETGNPMED-LKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNIS 368
           +      E   K  +++ QL             F+E  ++       LK + + +F+N++
Sbjct: 241 FCDLVNKEIKNKMDNVISQL---------DTKIFNEDLVFANDLSLTLKDEFRSRFKNVT 291

Query: 369 ALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQTVSITSNGRFE 419
            +MDCV C++CRLWGK+Q  G  TALKILF +N  +  ++   +    ++E
Sbjct: 292 KIMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYE 342

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
d1rp4a_374 Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast 100.0
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-125  Score=950.13  Aligned_cols=343  Identities=29%  Similarity=0.606  Sum_probs=291.1

Q ss_pred             chHhHHHhhhhhhhhhhHHhhcCCCceeEeeeCCCCCCCCC-CCCCCCCCCCccccCCC-CCCCcCCCcccccCCCCCcc
Q 014170           73 DYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWP-DDGMCRLRDCSVCECPE-TEFPESFKKPFIRGLSSDDL  150 (429)
Q Consensus        73 ~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~-dd~~C~~~~C~V~~c~e-~eiP~~wr~~~~~~~~~~~~  150 (429)
                      +|+|||++|++ |+|+|++|+++||||||||||+++||||. ++++|++++|+|++|++ ++||+.||++..+++..+..
T Consensus         2 s~~~vd~~N~~-i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~   80 (374)
T d1rp4a_           2 SFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM   80 (374)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred             CHHHHHHHHHH-HHHHHHHhcCCCceeeeecCCCCCCCCCCccccCcCCCCCCCccCCccccCccccccccccccccchh
Confidence            79999999997 79999999999999999999999999995 67999999999999975 67999999887665544322


Q ss_pred             hhccCCC--ccccccccchhhccCCcccCC--CCCCCCCCCCCcceEeeCCCCCCCCCCCCCCChhhhHHHHhhhcCCCC
Q 014170          151 ACQEGKP--EAAVDRTLDSQAFRGWTETDN--PWTHDDETDNAEMTYVNLQLNPERYTGYTGPSARRIWDAIYSENCPTY  226 (429)
Q Consensus       151 ~c~~~~~--~~~vd~~l~~~~~~~w~~~d~--~~~~~de~~~~~~~YVDL~~NPERyTGY~G~~A~~IW~aIY~ENCf~~  226 (429)
                      .......  ....|..  ......|...++  .||..|++++++++||||++||||||||+|++|++||++||+||||++
T Consensus        81 ~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~  158 (374)
T d1rp4a_          81 KEADDSDDECKFLDQL--CQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTI  158 (374)
T ss_dssp             EECCTTCGGGSBHHHH--SSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCT
T ss_pred             hhccccccchhhcchh--hhhhccccccccccccccccccCCCCceEeehhhCcccccCCCCCcHHHHHHHHHHHhCCCC
Confidence            1111100  0001110  012233443333  356555556789999999999999999999999999999999999999


Q ss_pred             CCcchhhHHHHHHHHhhhhhHHHHHHHHhhhccccccCcCCCCHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHhhhh
Q 014170          227 PSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFLFVLRAVTKAAEYLE  306 (429)
Q Consensus       227 ~~~~~C~EkrvfyRLISGLHaSIs~Hi~~~Yl~d~~~~~w~pNl~~f~~Rv~~~PeRl~NLYF~Y~lvLRAl~Ka~p~L~  306 (429)
                      +.+++|+|||+|||||||||||||||||++|++ +.++.|+||+++|++|||+|||||+||||+|++|||||+||+|||.
T Consensus       159 ~~~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~-~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~  237 (374)
T d1rp4a_         159 GETGESLAKDAFYRLVSGFHASIGTHLSKEYLN-TKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLP  237 (374)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEEE-TTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCcCccCCCHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999984 5578999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCccccHHHHHHHHHHhccccccccCCCCCccccccCCCCcchHHHHHHHhhhhhhhhhcCccCCccccchhhh
Q 014170          307 QAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQ  386 (429)
Q Consensus       307 ~~~f~tg~~~eD~~t~~lv~~Ll~~~~~~~sc~~~FDE~~lF~~~~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKlQ  386 (429)
                      +++|+++.   |.+++..++.|+..     .+|.+|||+.||+++.+..||+|||+||||||||||||||||||||||||
T Consensus       238 ~~~~~~~~---~~~~~~~~~~l~~~-----~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~CeKCrLwGKlQ  309 (374)
T d1rp4a_         238 EFSFCDLV---NKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQ  309 (374)
T ss_dssp             CCSTTSST---TTTHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCCSHHHHHHHHHH
T ss_pred             hcCCCCCC---CHHHHHHHHHHHHH-----hccccCCHHHhcCCcchHHHHHHHHHHHHHHHHHHcccCccHhHhhHHHH
Confidence            99998764   55566667777753     36788999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhhccCCCcCCC---CCccccccceeeeecccccc
Q 014170          387 VLGLGTALKILFSVNGEEHLS---QTVSITSNGRFETSHSNFLF  427 (429)
Q Consensus       387 t~GLgTALKILF~~~~~~~~~---~~~~L~R~EiVAL~N~~~~~  427 (429)
                      |+||||||||||+.++.+..+   ..++|+|+|||||||||.+|
T Consensus       310 t~GlgtALKILf~~~~~~~~~~~~~~~~L~R~ElvALiNt~~rl  353 (374)
T d1rp4a_         310 TTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRL  353 (374)
T ss_dssp             HHHHHHHHHHHHHHHTCCHHHHHHHHHTSBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccccCcccccccccHHHHHHHHHHHHHH
Confidence            999999999999987653321   13579999999999999886